The Near and Far-IR SEDs of Spitzer GTO ULIRGs

NASA Astrophysics Data System (ADS)

Marshall, Jason; Armus, Lee; Spoon, Henrik

2008-03-01

Spectra of a sample of 109 ultraluminous infrared galaxies (ULIRGs) have been obtained as part of the Spitzer IRS GTO program, providing a dataset with which to study the underlying obscured energy source(s) (i.e., AGN and/or starburst activity) powering ULIRGs in the local universe, and providing insight into the high-redshift infrared-luminous galaxies responsible for the bulk of the star-formation energy density at z = 2-3. As part of this effort, we have developed the CAFE spectral energy distribution decomposition tool to analyze the UV to sub-mm SEDs of these galaxies (including their IRS spectra). Sufficient photometry for these decompositions exists for approximately half of the GTO ULIRGs. However, we lack crucial data for the other half of the sample in either or both the 2-5 micron gap between the near-IR passbands and the start of the IRS wavelength coverage and the far-IR beyond 100 microns. These spectral regions provide critical constraints on the amount of hot dust near the dust sublimation temperature (indicating the presence of an AGN) and the total luminosity and mass of dust in the galaxy (dominated by the coldest dust emitting at far-IR wavelengths). We therefore propose to obtain IRAC observations in all channels and MIPS observations at 70 and 160 microns for the 37 and 17 GTO ULIRGs lacking data in these wavelength ranges, respectively. Considering its very low cost of 7.3 total hours of observation, the scientific return from this program is enormous: nearly doubling the number of GTO ULIRGs with full spectral coverage, and completing a dataset that is sure to be an invaluable resource well beyond the lifetime of Spitzer.

Understanding Local Luminous Infrared Galaxies in the Herschel Era

NASA Astrophysics Data System (ADS)

Chu, Jason; Sanders, David B.; Larson, Kirsten L.; Mazzarella, Joseph M.; Howell, Justin; Diaz Santos, Tanio; Xu, C. Kevin; Paladini, Roberta; Schulz, Bernhard; Shupe, David L.; Appleton, Philip N.; Armus, Lee; Billot, Nicolas; Pan Chan, Hiu; Evans, Aaron S.; Fadda, Dario; Frayer, David T.; Haan, Sebastian; Mie Ishida, Catherine; Iwasawa, Kazushi; Kim, Dong-Chan; Lord, Steven D.; Murphy, Eric J.; Petric, Andreea; Privon, George C.; Surace, Jason A.; Treister, Ezequiel; Great Observatories All-Sky LIRG Survey, Cosmic Evolution Survey

2017-06-01

Luminous and ultraluminous infrared galaxies [(U)LIRGs] are some of the most extreme objects in the universe with their elevated star formation rates and/or presence of a powerful AGN, playing a central role in the evolution of galaxies throughout cosmic history. The 201 local (U)LIRGs (z<0.088) within the Great Observatories All-Sky LIRG Survey (GOALS) provide an unmatched opportunity to characterize the diverse properties in a large, statistically significant sample, in addition to comparisons with their high redshift counterparts. In this thesis talk I will first present the Herschel PACS and SPIRE far infrared image atlas of the entire GOALS sample (encompassing the 70-500 micron wavelength range), and demonstrate the excellent data quality. The Herschel GOALS images presented here are the highest resolution, most sensitive and comprehensive far-infrared imaging survey of the nearest (U)LIRGs to date. This allows us for the first time to directly probe the critical far infrared and submillimeter wavelength regime of these systems, enabling us to accurately determine the bolometric luminosities, infrared surface brightnesses, star formation rates, and dust masses and temperatures on spatial scales of 2-5 kpc. In addition, the superb resolution of Herschel means we can resolve many of the galaxy pairs and systems within the GOALS sample, allowing us to measure far infrared fluxes of component galaxies. Finally, using the Herschel photometry in conjunction with Spitzer, WISE, and IRAS data, I will show our first results on the global properties of (U)LIRGs such as their average 3-500 micron infrared SEDs and far infrared colors, and compare them to lower infrared luminosity objects. We will also compare and contrast their infrared SED shapes with previously published SED templates from the literature. If time permits, I will also show initial results from our rest-frame optical spectroscopy program on z~2.3 infrared selected galaxies in the COSMOS field.

THE STAR FORMATION HISTORIES OF z {approx} 2 DUST-OBSCURED GALAXIES AND SUBMILLIMETER-SELECTED GALAXIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bussmann, R. S.; Dey, Arjun; Jannuzi, B. T.

The Spitzer Space Telescope has identified a population of ultraluminous infrared galaxies (ULIRGs) at z {approx} 2 that may play an important role in the evolution of massive galaxies. We measure the stellar masses (M{sub *}) of two populations of Spitzer-selected ULIRGs that have extremely red R - [24] colors (dust-obscured galaxies, or DOGs) and compare our results with submillimeter-selected galaxies (SMGs). One set of 39 DOGs has a local maximum in their mid-infrared (mid-IR) spectral energy distribution (SED) at rest frame 1.6 {mu}m associated with stellar emission ({sup b}ump DOGs{sup )}, while the other set of 51 DOGs havemore » power-law mid-IR SEDs that are typical of obscured active galactic nuclei ({sup p}ower-law DOGs{sup )}. We measure M{sub *} by applying Charlot and Bruzual stellar population synthesis models to broadband photometry in the rest-frame ultraviolet, optical, and near-infrared of each of these populations. Assuming a simple stellar population and a Chabrier initial mass function, we find that power-law DOGs and bump DOGs are on average a factor of 2 and 1.5 more massive than SMGs, respectively (median and inter-quartile M{sub *} values for SMGs, bump DOGs, and power-law DOGs are log(M{sub *}/M{sub Sun }) = 10.42{sup +0.42}{sub -0.36}, 10.62{sup +0.36}{sub -0.32}, and 10.71{sup +0.40}{sub -0.34}, respectively). More realistic star formation histories drawn from two competing theories for the nature of ULIRGs at z {approx} 2 (major merger versus smooth accretion) can increase these mass estimates by up to 0.5 dex. A comparison of our stellar masses with the instantaneous star formation rate (SFR) in these z {approx} 2 ULIRGs provides a preliminary indication supporting high SFRs for a given M{sub *}, a situation that arises more naturally in major mergers than in smooth accretion-powered systems.« less

The Dynamics and Cold Gas Content of Luminous Infrared Galaxy Mergers in the Local Universe

NASA Astrophysics Data System (ADS)

Privon, G. C.

2014-08-01

Luminous Infrared Galaxies (LIRGs; 10^11 ≤ L_IR [8 - 1000 μm]/L_sun < 10^12) and Ultraluminous Infrared Galaxies (ULIRGS; L_IR [8 - 1000 μm]/L_sun ≥ 10^12) are the most extreme star forming systems in the local universe, both in terms of their absolute star formation rates—ten to several hundred times that of ``normal'' galaxies—and their star formation rate densities. Many U/LIRGs are interacting or merging disk galaxies undergoing enhanced star formation and/or nuclear activity, likely triggered as the objects transform into massive S0 and elliptical merger remnants. The LIRG population also contains a significant number of apparently isolated disk galaxies which are undergoing enhanced star formation, providing a window on secular galaxy evolution. This work examines nearby U/LIRGs chosen from the Great Observatories All-sky LIRG Survey (GOALS), an infrared flux and luminosity selected sample. The proximity of these systems enables high spatial resolution study of active galactic nuclei (AGN) and extreme star formation in these objects. New maps of the neutral hydrogen (HI) emission are presented for systems morphologically classified in the optical and mid-infrared as non-merging or pre-merger systems. The results of this study suggests that some infrared-selected galaxies may be minor mergers or interactions which are being viewed so soon after first pass that the stellar disk has not yet been significantly disturbed. Galaxy mergers appear to drive much of the enhanced activity observed in U/LIRGs; understanding the merger state of these systems provides a context for observations of star formation and AGN properties. In order to constrain the merger stage, dynamical models for a sample of nine systems were matched to the observed kinematics and morphology as obtained from optical imaging and interferometric HI maps. The resulting models are used not only to constrain the merger stage, but also the encounter geometry of the precursor. Based on these dynamical models a new merger stage classification is presented, which re-scales objects to a common timeline is used to place the observations in context. Applications of this dynamical merger stage to the study of star formation rates and indicators of AGN activity are presented. Finally, newly obtained measurements of the galaxy-integrated 1-0 rotational transitions of hydrogen cyanide (HCN) and formylium (HCO^+) in a sample of U/LIRGs are used to investigate the ratio of HCN (1-0) to HCO (1-0) and its dependence on mid-infrared indicators of AGN strength. In contrast to previous claims, it is demonstrated that high values of this ratio are not uniquely linked to the presence of an AGN, but can be achieved in systems dominated by star formation. This suggests the excitation of these high critical density molecular gas tracers is determined by the complex interplay of radiation field, gas density, and gas column.

SHOCK EXCITED MOLECULES IN NGC 1266: ULIRG CONDITIONS AT THE CENTER OF A BULGE-DOMINATED GALAXY

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pellegrini, E. W.; Smith, J. D.; Crocker, A. F.

We investigate the far infrared (IR) spectrum of NGC 1266, a S0 galaxy that contains a massive reservoir of highly excited molecular gas. Using the Herschel Fourier Transform Spectrometer, we detect the {sup 12}CO ladder up to J = (13-12), [C I] and [N II] lines, and also strong water lines more characteristic of UltraLuminous IR Galaxies (ULIRGs). The {sup 12}CO line emission is modeled with a combination of a low-velocity C-shock and a photodissociation region. Shocks are required to produce the H{sub 2}O and most of the high-J CO emission. Despite having an IR luminosity 30 times less than a typicalmore » ULIRG, the spectral characteristics and physical conditions of the interstellar medium of NGC 1266 closely resemble those of ULIRGs, which often harbor strong shocks and large-scale outflows.« less

MIPS AGN and Galaxy Evolution Survey

NASA Astrophysics Data System (ADS)

Jannuzi, Buell; Armus, Lee; Borys, Colin; Brand, Kate; Brodwin, Mark; Brown, Michael; Cool, Richard; Desai, Vandana; Dey, Arjun; Dickinson, Mark; Dole, Herve; Eisenstein, Daniel; Kochanek, Christopher; Le Floc'h, Emeric; Morrison, Jane; Papovich, Casey; Perez-Gonzalez, Pablo; Rieke, George; Rieke, Marcia; Stern, Daniel; Weiner, Ben; Zehavi, Idit

2008-03-01

We propose a far-IR survey of the 9 square degree Bootes field of the NOAO Deep Wide-Field Survey (NDWFS) to 5-sigma flux limits of 0.2, 12.8 and 120 mJy to detect approximately 60000, 3000, and 400 sources at 24, 70 and 160 microns respectively. By combining observations at different roll angles, our maps will have excellent control of detector drifts, enabling precise fluctuation analyses in all three maps. In combination with the matching X-ray, UV, optical, near-IR, and mid-IR photometry, variability data, and the 22,000 spectroscopic redshifts for the field, we have three primary goals. First, we will survey the evolution of LIRGS/ULIRGS to redshifts of 0.6/1.3 at 24 microns and 0.4/0.8 at 70 microns. Over 500 0.6

A Pilot Study to Directly Measure the Dynamical Masses of ULIRGs at Intermediate Redshifts

NASA Astrophysics Data System (ADS)

Rothberg, Barry

2012-02-01

We propose a pilot study to use the Calcium II Triplet stellar absorption lines (rest-frame 0.85 microns) in conjunction with publicly available, high-resolution rest-frame optical HST imaging to directly measure the dynamical masses (M_dyn) and estimate central black hole masses (M_BH) in a small sample of intermediate redshift ULIRGs (0.4 < z < 1.0). It is the same method we have used to measure M_dyn and M_BH in local ULIRGs, and has successfully shown that these systems are statistically indistinguishable from nearby (z < 0.4) QSOs. At 0.4 < z < 1.0, the star-formation rates, gas fractions, and (presumably) masses, are believed to be significantly higher than in the local universe. However, mass is a critical parameter in most galaxy scaling relations, and current methods to estimate mass at intermediate redshifts rely heavily on unproven assumptions. Using stellar velocity dispersions is a straight-forward method to measuring M_dyn, and we will use it to: 1) conf! irm higher masses at 0.4 < z < 1.0; and 2) provide a calibration for other techniques.

The dust masses of powerful radio galaxies: clues to the triggering of their activity

NASA Astrophysics Data System (ADS)

Tadhunter, C.; Dicken, D.; Morganti, R.; Konyves, V.; Ysard, N.; Nesvadba, N.; Ramos Almeida, C.

2014-11-01

We use deep Herschel Space Observatory observations of a 90 per cent complete sample of 32 intermediate-redshift 2Jy radio galaxies (0.05 < z < 0.7) with strong emission lines to estimate the dust masses of their host galaxies and thereby investigate the triggering mechanisms for their quasar-like AGN. The dust masses derived for the radio galaxies (7.2 × 105 < Md < 2.6 × 108 M⊙) are intermediate between those of quiescent elliptical galaxies on the one hand, and ultraluminous infrared galaxies (ULIRGs) on the other. Consistent with simple models for the co-evolution of supermassive black holes and their host galaxies, these results suggest that most radio galaxies represent the late time re-triggering of AGN activity via mergers between the host giant elliptical galaxies and companion galaxies with relatively low gas masses. However, a minority of the radio galaxies in our sample (˜20 per cent) have high, ULIRG-like dust masses, along with evidence for prodigious star formation activity. The latter objects are more likely to have been triggered in major, gas-rich mergers that represent a rapid growth phase for both their host galaxies and their supermassive black holes.

Star Formation and AGN Activity in Ultraluminous Infrared Galaxies at z > 1.15

NASA Astrophysics Data System (ADS)

Baldassare, Vivienne; Kartaltepe, J.

2012-01-01

We studied active galactic nucleus (AGN) activity and star formation in a sample of 52 luminous and ultraluminous infrared galaxies ((U)LIRGs) with 1.17 < z < 1.602 and LIR > 1011.5 Lsolar. ULIRGs get their extreme infrared luminosities from the heating of dust by star formation and/or AGN. Studies done in the local universe have revealed that all local ULIRGs are mergers (Sanders & Mirabel 1996), and have proposed evolutionary schemes in which early merger stages are dominated by starbursts, intermediate merger stages are dominated by starburst-AGN composite objects, and late merger stages are dominated by AGN (Yuan et al. 2010). They have also shown that most ULIRGs with LIR > 1012.4-12.5 Lsolar appear AGN-like (Tran et al. 2001). We used near infrared spectroscopy in order to determine whether these trends extend to high redshift, utilizing the [NII]/H-alpha and [OIII]/H-beta line ratios to plot our objects on a BPT diagram which classifies them as star forming, AGN, or composite. We find that many of the objects in our sample show evidence of mergers or interactions, and that all objects in our sample with LIR >1012.5 Lsolar are AGN or composite objects. Vivienne Baldassare was supported by the NOAO/KPNO Research Experiences for Undergraduates (REU) Program which is funded by the National Science Foundation Research Experiences for Undergraduates Program and the Department of Defense ASSURE program through Scientific Program Order No. 13 (AST-0754223) of the Cooperative Agreement No. AST-0132798 between the Association of Universities for Research in Astronomy (AURA) and the NSF.

HUBBLE SPACE TELESCOPE MORPHOLOGIES OF z {approx} 2 DUST-OBSCURED GALAXIES. II. BUMP SOURCES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bussmann, R. S.; Dey, Arjun; Lotz, J.

We present Hubble Space Telescope imaging of 22 ultra-luminous infrared galaxies (ULIRGs) at z {approx} 2 with extremely red R - [24] colors (called dust-obscured galaxies, or DOGs) which have a local maximum in their spectral energy distribution (SED) at rest-frame 1.6 {mu}m associated with stellar emission. These sources, which we call 'bump DOGs', have star formation rates (SFRs) of 400-4000 M{sub sun} yr{sup -1} and have redshifts derived from mid-IR spectra which show strong polycyclic aromatic hydrocarbon emission-a sign of vigorous ongoing star formation. Using a uniform morphological analysis, we look for quantifiable differences between bump DOGs, power-law DOGsmore » (Spitzer-selected ULIRGs with mid-IR SEDs dominated by a power law and spectral features that are more typical of obscured active galactic nuclei than starbursts), submillimeter-selected galaxies, and other less-reddened ULIRGs from the Spitzer Extragalactic First Look Survey. Bump DOGs are larger than power-law DOGs (median Petrosian radius of 8.4 {+-} 2.7 kpc versus 5.5 {+-} 2.3 kpc) and exhibit more diffuse and irregular morphologies (median M{sub 20} of -1.08 {+-} 0.05 versus -1.48 {+-} 0.05). These trends are qualitatively consistent with expectations from simulations of major mergers in which merging systems during the peak SFR period evolve from M{sub 20} = -1.0 to M{sub 20} = -1.7. Less-obscured ULIRGs (i.e., non-DOGs) tend to have more regular, centrally peaked, single-object morphologies rather than diffuse and irregular morphologies. This distinction in morphologies may imply that less-obscured ULIRGs sample the merger near the end of the peak SFR period. Alternatively, it may indicate that the intense star formation in these less-obscured ULIRGs is not the result of a recent major merger.« less

Characterising the Dense Molecular Gas in Exceptional Local Galaxies

NASA Astrophysics Data System (ADS)

Tunnard, Richard C. A.

2016-08-01

The interferometric facilities now coming online (the Atacama Large Millimetre Array (ALMA) and the NOrthern Extended Millimeter Array (NOEMA)) and those planned for the coming decade (the Next Generation Very Large Array (ngVLA) and the Square Kilometre Array (SKA)) in the radio to sub-millimetre regimes are opening a window to the molecular gas in high-redshift galaxies. However, our understanding of similar galaxies in the local universe is still far from complete and the data analysis techniques and tools needed to interpret the observations in consistent and comparable ways are yet to be developed. I first describe the Monte Carlo Markov Chain (MCMC) script developed to empower a public radiative transfer code. I characterise both the public code and MCMC script, including an exploration of the effect of observing molecular lines at high redshift where the Cosmic Microwave Background (CMB) can provide a significant background, as well as the effect this can have on well-known local correlations. I present two studies of ultraluminous infrared galaxies (ULIRGs) in the local universe making use of literature and collaborator data. In the first of these, NGC6240, I use the wealth of available data and the geometry of the source to develop a multi-phase, multi-species model, finding evidence for a complex medium of hot diffuse and cold dense gas in pressure equilibrium. Next, I study the prototypical ULIRG Arp 220; an extraordinary galaxy rendered especially interesting by the controversy over the power source of the western of the two merger nuclei and its immense luminosity and dust obscuration. Using traditional grid based methods I explore the molecular gas conditions within the nuclei and find evidence for chemical differentiation between the two nuclei, potentially related to the obscured power source. Finally, I investigate the potential evolution of proto-clusters over cosmic time with sub-millimetre observations of 14 radio galaxies, unexpectedly finding little to no evidence for cluster evolution.

The role of submillimetre galaxies in galaxy evolution

NASA Astrophysics Data System (ADS)

Pope, Erin Alexandra

2007-08-01

This thesis presents a comprehensive study of high redshift submillimetre galaxies (SMGs) using the deepest multi-wavelength observations. The submm sample consists of galaxies detected at 850 mm with the Submillimetre Common User Bolometer Array (SCUBA) in the Great Observatories Origins Deep Survey- North region. Using the deep Spitzer Space Telescope images and new data and reductions of the Very Large Array radio data, I find statistically secure counterparts for 60% of the submm sample, and identify tentative counterparts for most of the remaining objects. This is the largest sample of submm galaxies with statistically secure counterparts detected in the radio and with Spitzer . This thesis presents spectral energy distributions (SEDs), Spitzer colours, and infrared (IR) luminosities for the SMGs. A composite rest-frame SED shows that the submm sources peak at longer wavelengths than those of local ultraluminous IR galaxies (ULIRGs), i.e. they appear to be cooler than local ULIRGs of the same luminosity. This demonstrates the strong selection effects, both locally and at high redshift, which may lead to an incomplete census of the ULIRG population. The SEDs of submm galaxies are also different from those of their high redshift neighbours, the near-IR selected BzK galaxies, whose mid-IR to radio SEDs are more like those of local ULIRGs. I fit templates that span the mid-IR through radio to derive the integrated 1R luminosities of the submm galaxies and find a median value of L IR (8-1000 mm) = 6.0 x 10 12 [Special characters omitted.] . I also find that submm flux densities by themselves systematically overpredict L IR when using templates which obey the local ULIRG temperature-luminosity relation. The SED fits show that SMGs are consistent with the correlation between radio and IR luminosity observed in local galaxies. Because the shorter Spitzer wavelengths sample the stellar bump at the redshifts of the submm sources, one can obtain a model independent estimate of the redshift, s(D z /(1 + z )) = 0.07. The median redshift of the secure submm counterparts is 2.0. Using X-ray and mid-IR imaging data, only 5% of the secure counterparts show strong evidence for an active galactic nucleus (AGN) dominating the IR luminosity. This thesis also presents deep Spitzer mid-IR spectroscopy of 13 of these SMGs in order to determine the contribution from AGN and starburst emission to the IR luminosity. I find strong polycyclic aromatic hydrocarbon (PAH) emission features in all of the targets, while only 2/13 SMGs have a significant mid-IR rising power-law component which would indicate an AGN. In the high signal-to- noise ratio composite spectrum of the SMGs I find that the AGN component contributes at most 30% of the mid-IR luminosity, implying that the total LIR in SMGs is dominated by star formation and not AGN emission. I also find that the SMGs lie on the relation between the luminosity of the main PAH features and L IR established for local starburst galaxies, confirming that the PAH luminosity can be used as a proxy for the star formation rate. Interestingly, local ULIRGs, which are often thought to be the low redshift analogues of SMGs, lie off these relations, as they appear deficient in PAH luminosity for a given L IR . In terms of an evolutionary scenario for IR luminous galaxies, SMGs are consistent with being an earlier phase in the massive merger (compared with other local or high redshift ULIRGs) in which the AGN has not yet become strong enough to heat the dust and dilute the PAH emission. I further investigate the overlap between high redshift infrared and submm populations using a statistical stacking analysis to measure the contribution of near- and mid-IR galaxy populations to the 850 mm submm background. For the first time, it is found that the 850 mm background can be completely resolved into individual galaxies and the bulk of these galaxies lie at z [Special characters omitted.] 3. Additionally I present a detailed study of the most distant SMG discovered to date, which I call GN20. This unusually bright source led to the discovery of a high redshift galaxy cluster, which is likely to be lensing the SMG. I discuss the potential for using bright SMGs in future submm surveys to identify high redshift clusters. Finally, for this complete sample of SMGs, I present the cumulative flux distribution at X-ray, optical, IR and radio wavelengths and I determine the depths at which one can expect to detect the majority of submm galaxies in future mm/submm surveys, such as with SCUBA-2, the successor to SCUBA.

The Spectral Energy Distributions and Infrared Luminosities of z ≈ 2 Dust-obscured Galaxies from Herschel and Spitzer

NASA Astrophysics Data System (ADS)

Melbourne, J.; Soifer, B. T.; Desai, Vandana; Pope, Alexandra; Armus, Lee; Dey, Arjun; Bussmann, R. S.; Jannuzi, B. T.; Alberts, Stacey

2012-05-01

Dust-obscured galaxies (DOGs) are a subset of high-redshift (z ≈ 2) optically-faint ultra-luminous infrared galaxies (ULIRGs, e.g., L IR > 1012 L ⊙). We present new far-infrared photometry, at 250, 350, and 500 μm (observed-frame), from the Herschel Space Telescope for a large sample of 113 DOGs with spectroscopically measured redshifts. Approximately 60% of the sample are detected in the far-IR. The Herschel photometry allows the first robust determinations of the total infrared luminosities of a large sample of DOGs, confirming their high IR luminosities, which range from 1011.6 L ⊙ 1013 L ⊙. The rest-frame near-IR (1-3 μm) spectral energy distributions (SEDs) of the Herschel-detected DOGs are predictors of their SEDs at longer wavelengths. DOGs with "power-law" SEDs in the rest-frame near-IR show observed-frame 250/24 μm flux density ratios similar to the QSO-like local ULIRG, Mrk 231. DOGs with a stellar "bump" in their rest-frame near-IR show observed-frame 250/24 μm flux density ratios similar to local star-bursting ULIRGs like NGC 6240. None show 250/24 μm flux density ratios similar to extreme local ULIRG, Arp 220; though three show 350/24 μm flux density ratios similar to Arp 220. For the Herschel-detected DOGs, accurate estimates (within ~25%) of total IR luminosity can be predicted from their rest-frame mid-IR data alone (e.g., from Spitzer observed-frame 24 μm luminosities). Herschel-detected DOGs tend to have a high ratio of infrared luminosity to rest-frame 8 μm luminosity (the IR8 = L IR(8-1000 μm)/νL ν(8 μm) parameter of Elbaz et al.). Instead of lying on the z = 1-2 "infrared main sequence" of star-forming galaxies (like typical LIRGs and ULIRGs at those epochs) the DOGs, especially large fractions of the bump sources, tend to lie in the starburst sequence. While, Herschel-detected DOGs are similar to scaled up versions of local ULIRGs in terms of 250/24 μm flux density ratio, and IR8, they tend to have cooler far-IR dust temperatures (20-40 K for DOGs versus 40-50 K for local ULIRGs) as measured by the rest-frame 80/115 μm flux density ratios (e.g., observed-frame 250/350 μm ratios at z = 2). DOGs that are not detected by Herschel appear to have lower observed-frame 250/24 μm ratios than the detected sample, either because of warmer dust temperatures, lower IR luminosities, or both. Herschel is an ESA space observatory with science instruments provided by European-led Principal Investigator consortia and with important participation from NASA.

The Ly(alpha) Line Profiles of Ultraluminous Infrared Galaxies: Fast Winds and Lyman Continuum Leakage

NASA Technical Reports Server (NTRS)

Martin, Crystal L.; Dijkstra, Mark; Henry, Alaina L.; Soto, Kurt T.; Danforth, Charles W.; Wong, Joseph

2015-01-01

We present new Hubble Space Telescope Cosmic Origins Spectrograph far-ultraviolet (far-UV) spectroscopy and Keck Echellete optical spectroscopy of 11 ultraluminous infrared galaxies (ULIRGs), a rare population of local galaxies experiencing massive gas inflows, extreme starbursts, and prominent outflows. We detect Ly(alpha) emission from eight ULIRGs and the companion to IRAS09583+4714. In contrast to the P Cygni profiles often seen in galaxy spectra, the Ly(alpha) profiles exhibit prominent, blueshifted emission out to Doppler shifts exceeding -1000 km/s in three H II-dominated and two AGN-dominated ULIRGs. To better understand the role of resonance scattering in shaping the Ly(alpha) line profiles, we directly compare them to non-resonant emission lines in optical spectra. We find that the line wings are already present in the intrinsic nebular spectra, and scattering merely enhances the wings relative to the line core. The Ly(alpha) attenuation (as measured in the COS aperture) ranges from that of the far-UV continuum to over 100 times more. A simple radiative transfer model suggests the Ly(alpha) photons escape through cavities which have low column densities of neutral hydrogen and become optically thin to the Lyman continuum in the most advanced mergers. We show that the properties of the highly blueshifted line wings on the Ly(alpha) and optical emission-line profiles are consistent with emission from clumps of gas condensing out of a fast, hot wind. The luminosity of the Ly(alpha) emission increases nonlinearly with the ULIRG bolometric luminosity and represents about 0.1-1% of the radiative cooling from the hot winds in the H II-dominated ULIRGs.

Monsters and babies from the first/IRAS survey

DOE Office of Scientific and Technical Information (OSTI.GOV)

Van Bruegel, W J M

Radio continuum emission at cm wavelengths is relatively little affected by extinction. When combined with far-infrared (FIR) surveys this provides for a convenient and unbiased method to select (radio-loud) AGN and starbursts deeply embedded in gas and dust-rich galaxies. Such radio-selected FIR samples are useful for detailed investigations of the complex relationships between (radio) galaxy and starburst activity, and to determine whether ULIRGs are powered by hidden quasars (monsters) or young stars (babies). We present the results of a large program to obtain identifications and spectra of radio-sleected, optically faint IRAS/FSC objects using the FIRST/VLA 20 cm survey (Becker, Whitemore » and Helfand 1995). These objects are all radio-'quiet' in the sense that their radio power/FIR luminosities follow the well-known radio/FIR relationship for star forming galaxies. We compare these results to a previous study by our group of a sample of radio-'loud' IRAS/FSC ULIRGs selected from the Texas 365 MHz survey (Douglas et al. 1996). Many of these objects also show evidence for dominant, A-type stellar populations, as well as high ionization lines usually associated with AGN. These radio-loud ULIRGs have properties intermediate between those of starbursts and quasars, suggesting a possibile evolutionary connection. Deep Keck spectroscopic observations of three ULIRGs from these samples are presented, including high signal-to-noise spectropolarimetry. The polarimetry observations failed to show evidence of a hidden quasar in polarized (scattered) light in the two systems in which the stellar light was dominated by A-type stars. Although observations of a larger sample would be needed to allow a general conclusion, our current data suggest that a large fraction of ULIRGs may be powered by luminous starbursts, not by hidden, luminous AGN (quasars). While we used radio-selected FIR sources to search for evidence of a causal AGN/starburst connection, we conclude our presentation with a dramatic example of an AGN/starburst object from an entirely unrelated quasar survey selected at the opposite, blue end of the spectrum.« less

THE HERSCHEL COMPREHENSIVE (U)LIRG EMISSION SURVEY (HERCULES): CO LADDERS, FINE STRUCTURE LINES, AND NEUTRAL GAS COOLING

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rosenberg, M. J. F.; Van der Werf, P. P.; Israel, F. P.

2015-03-10

(Ultra) luminous infrared galaxies ((U)LIRGs) are objects characterized by their extreme infrared (8-1000 μm) luminosities (L {sub LIRG} > 10{sup 11} L {sub ☉} and L {sub ULIRG} > 10{sup 12} L {sub ☉}). The Herschel Comprehensive ULIRG Emission Survey (PI: van der Werf) presents a representative flux-limited sample of 29 (U)LIRGs that spans the full luminosity range of these objects (10{sup 11} L {sub ☉} ≤ L {sub IR} ≤ 10{sup 13} L {sub ☉}). With the Herschel Space Observatory, we observe [C II] 157 μm, [O I] 63 μm, and [O I] 145 μm line emission with Photodetector Array Cameramore » and Spectrometer, CO J = 4-3 through J = 13-12, [C I] 370 μm, and [C I] 609 μm with SPIRE, and low-J CO transitions with ground-based telescopes. The CO ladders of the sample are separated into three classes based on their excitation level. In 13 of the galaxies, the [O I] 63 μm emission line is self absorbed. Comparing the CO excitation to the InfraRed Astronomical Satellite 60/100 μm ratio and to far infrared luminosity, we find that the CO excitation is more correlated to the far infrared colors. We present cooling budgets for the galaxies and find fine-structure line flux deficits in the [C II], [Si II], [O I], and [C I] lines in the objects with the highest far IR fluxes, but do not observe this for CO 4 ≤ J {sub upp} ≤ 13. In order to study the heating of the molecular gas, we present a combination of three diagnostic quantities to help determine the dominant heating source. Using the CO excitation, the CO J = 1-0 linewidth, and the active galactic nucleus (AGN) contribution, we conclude that galaxies with large CO linewidths always have high-excitation CO ladders, and often low AGN contributions, suggesting that mechanical heating is important.« less

Ionized and Neutral Outflows in the QUEST QSOs

NASA Astrophysics Data System (ADS)

Veilleux, Sylvain

2011-10-01

The role of galactic winds in gas-rich mergers is of crucial importance to understand galaxy and SMBH evolution. In recent months, our group has had three major scientific breakthroughs in this area: {1} The discovery with Herschel of massive molecular {OH-absorbing} outflows in several ULIRGs, including the nearest quasar, Mrk 231. {2} The independent discovery from mm-wave interferometric observations in the same object of a spatially resolved molecular {CO-emitting} wind with estimated mass outflow rate 3x larger than the star formation rate and spatially coincident with blueshifted neutral {Na ID-absorbing} gas in optical long-slit spectra. {3} The unambiguous determination from recent Gemini/IFU observations that the Na ID outflow in this object is wide-angle, thus driven by a QSO wind rather than a jet. This powerful outflow may be the long-sought "smoking gun" of quasar mechanical feedback purported to transform gas-rich mergers. However, our Herschel survey excludes all FIR-faint {UV-bright} "classic" QSOs by necessity. So here we propose a complementary FUV absorption-line survey of all FIR-bright -and- FIR-faint QSOs from the same parent sample. New {19 targets} and archival {11} spectra will be used to study, for the first time, the gaseous environments of QSOs as a function of host properties and age across the merger sequence ULIRG -> QSO. These data will allow us to distinguish between ionized & neutral quasar-driven outflows, starburst-driven winds, and tidal debris around the mergers. They will also be uniquely suited for a shallow but broad study of the warm & warm-hot intergalactic media, complementary to on-going surveys that are deeper but narrower.

Quantifying the AGN-driven outflows in ULIRGs (QUADROS) II: evidence for compact outflow regions from HST [OIII] imaging observations

NASA Astrophysics Data System (ADS)

Tadhunter, C.; Zaurín, J. Rodríguez; Rose, M.; Spence, R. A. W.; Batcheldor, D.; Berg, M. A.; Ramos Almeida, C.; Spoon, H. W. W.; Sparks, W.; Chiaberge, M.

2018-05-01

The true importance of the warm, AGN-driven outflows for the evolution of galaxies remains uncertain. Measurements of the radial extents of the outflows are key for quantifying their masses and kinetic powers, and also establishing whether the AGN outflows are galaxy-wide. Therefore, as part of a larger project to investigate the significance of warm, AGN-driven outflows in the most rapidly evolving galaxies in the local universe, here we present deep Hubble Space Telescope (HST) narrow-band [OIII]λ5007 observations of a complete sample of 8 nearby ULIRGs with optical AGN nuclei. Combined with the complementary information provided by our ground-based spectroscopy, the HST images show that the warm gas outflows are relatively compact for most of the objects in the sample: in three objects the outflow regions are barely resolved at the resolution of HST (0.065 < R[OIII] < 0.12 kpc); in a further four cases the outflows are spatially resolved but with flux weighted mean radii in the range 0.65 < R[OIII] < 1.2 kpc; and in only one object (Mrk273) is there clear evidence for a more extended outflow, with a maximum extent of R[OIII] ˜ 5 kpc. Overall, our observations show little evidence for the galaxy-wide outflows predicted by some models of AGN feedback.

ALMA Multiple-transition Observations of High-density Molecular Tracers in Ultraluminous Infrared Galaxies

NASA Astrophysics Data System (ADS)

Imanishi, Masatoshi; Nakanishi, Kouichiro; Izumi, Takuma

2018-04-01

We present the results of our ALMA observations of 11 (ultra)luminous infrared galaxies ((U)LIRGs) at J = 4–3 of HCN, HCO+, and HNC and J = 3–2 of HNC. This is an extension of our previously published HCN and HCO+ J = 3–2 observations to multiple rotational J-transitions of multiple molecules, to investigate how molecular emission line flux ratios vary at different J-transitions. We confirm that ultraluminous infrared galaxies (ULIRGs) that contain or may contain luminous obscured active galactic nuclei (AGNs) tend to show higher HCN-to-HCO+ flux ratios than starburst galaxies, both at J = 4–3 and J = 3–2. For selected HCN-flux-enhanced AGN-important ULIRGs, our isotopologue H13CN, H13CO+, and HN13C J = 3–2 line observations suggest a higher abundance of HCN than HCO+ and HNC, which is interpreted to be primarily responsible for the elevated HCN flux in AGN-important galaxies. For such sources, the intrinsic HCN-to-HCO+ flux ratios after line opacity correction will be higher than the observed ratios, making the separation between AGNs and starbursts even larger. The signature of the vibrationally excited (v 2 = 1f) HCN J = 4–3 emission line is seen in one ULIRG, IRAS 12112‑0305 NE. P Cygni profiles are detected in the HCO+ J = 4–3 and J = 3–2 lines toward IRAS 15250+3609, with an estimated molecular outflow rate of ∼250–750 M ⊙ yr‑1. The SiO J = 6–5 line also exhibits a P Cygni profile in IRAS 12112+0305 NE, suggesting the presence of shocked outflow activity. Shock tracers are detected in many sources, suggesting ubiquitous shock activity in the nearby ULIRG population.

THE SPECTRAL ENERGY DISTRIBUTIONS AND INFRARED LUMINOSITIES OF z Almost-Equal-To 2 DUST-OBSCURED GALAXIES FROM Herschel AND Spitzer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Melbourne, J.; Soifer, B. T.; Desai, Vandana

Dust-obscured galaxies (DOGs) are a subset of high-redshift (z Almost-Equal-To 2) optically-faint ultra-luminous infrared galaxies (ULIRGs, e.g., L{sub IR} > 10{sup 12} L{sub Sun} ). We present new far-infrared photometry, at 250, 350, and 500 {mu}m (observed-frame), from the Herschel Space Telescope for a large sample of 113 DOGs with spectroscopically measured redshifts. Approximately 60% of the sample are detected in the far-IR. The Herschel photometry allows the first robust determinations of the total infrared luminosities of a large sample of DOGs, confirming their high IR luminosities, which range from 10{sup 11.6} L{sub Sun} 10{sup 13} L{sub Sun }. Themore » rest-frame near-IR (1-3 {mu}m) spectral energy distributions (SEDs) of the Herschel-detected DOGs are predictors of their SEDs at longer wavelengths. DOGs with 'power-law' SEDs in the rest-frame near-IR show observed-frame 250/24 {mu}m flux density ratios similar to the QSO-like local ULIRG, Mrk 231. DOGs with a stellar 'bump' in their rest-frame near-IR show observed-frame 250/24 {mu}m flux density ratios similar to local star-bursting ULIRGs like NGC 6240. None show 250/24 {mu}m flux density ratios similar to extreme local ULIRG, Arp 220; though three show 350/24 {mu}m flux density ratios similar to Arp 220. For the Herschel-detected DOGs, accurate estimates (within {approx}25%) of total IR luminosity can be predicted from their rest-frame mid-IR data alone (e.g., from Spitzer observed-frame 24 {mu}m luminosities). Herschel-detected DOGs tend to have a high ratio of infrared luminosity to rest-frame 8 {mu}m luminosity (the IR8 = L{sub IR}(8-1000 {mu}m)/{nu}L{sub {nu}}(8 {mu}m) parameter of Elbaz et al.). Instead of lying on the z = 1-2 'infrared main sequence' of star-forming galaxies (like typical LIRGs and ULIRGs at those epochs) the DOGs, especially large fractions of the bump sources, tend to lie in the starburst sequence. While, Herschel-detected DOGs are similar to scaled up versions of local ULIRGs in terms of 250/24 {mu}m flux density ratio, and IR8, they tend to have cooler far-IR dust temperatures (20-40 K for DOGs versus 40-50 K for local ULIRGs) as measured by the rest-frame 80/115 {mu}m flux density ratios (e.g., observed-frame 250/350 {mu}m ratios at z = 2). DOGs that are not detected by Herschel appear to have lower observed-frame 250/24 {mu}m ratios than the detected sample, either because of warmer dust temperatures, lower IR luminosities, or both.« less

Probing star formation relations of mergers and normal galaxies across the CO ladder

NASA Astrophysics Data System (ADS)

Greve, Thomas R.

We examine integrated luminosity relations between the IR continuum and the CO rotational ladder observed for local (ultra) luminous infra-red galaxies ((U)LIRGs, L IR >= 1011 M⊙) and normal star forming galaxies in the context of radiation pressure regulated star formation proposed by Andrews & Thompson (2011). This can account for the normalization and linear slopes of the luminosity relations (log L IR = α log L'CO + β) of both low- and high-J CO lines observed for normal galaxies. Super-linear slopes occur for galaxy samples with significantly different dense gas fractions. Local (U)LIRGs are observed to have sub-linear high-J (J up > 6) slopes or, equivalently, increasing L COhigh-J /L IR with L IR. In the extreme ISM conditions of local (U)LIRGs, the high-J CO lines no longer trace individual hot spots of star formation (which gave rise to the linear slopes for normal galaxies) but a more widespread warm and dense gas phase mechanically heated by powerful supernovae-driven turbulence and shocks.

A multiwavelength and multiscale study of Luminous and Ultraluminous Infrared Galaxies in the local Universe

NASA Astrophysics Data System (ADS)

Herrero-Illana, Rubén

2014-10-01

This dissertation deals with the multiwavelength study of luminous and ultraluminous infrared galaxies (LIRGs and ULIRGs, respectively) in the local Universe under different spatial scales. The work is focused on the properties of massive starbursts, the contribution of active galactic nuclei (AGN) and the interplay between both phenomena. The study of local (U)LIRGs is the best scenario where to understand the properties of these objects at cosmological distances, where their luminosity contribution dominates the cosmic infrared background. Our first approach to the study of (U)LIRGs consisted of a spectral line study in the millimeter range, obtained with the IRAM 30m radio-telescope in Pico Veleta, Granada of a subsample of 56 (U)LIRGs from the GOALS project sample. We observed and analyzed spectra of several molecular features, focusing in the study of carbon monoxide (CO), a well-known tracer of cold molecular gas. We explored the relation between them as well as the properties of molecular gas. Besides of the sample characterization, we confirmed the increase of the isotopic ratio 12CO/13CO with the dust temperature, explained by the 12CO optical depth decreasing with temperature. We have also studied the kinematics and gas distribution using the spectral profiles of several molecular transitions. In a second part of this thesis, we analyzed the central kiloparsec region of a sample of 12 LIRGs, stressing the importance of the multiwavelength approach, aimed at deriving the star formation processes of these galaxies, as well as to study the contribution of the putative AGN to the bolometric luminosity in our sample. For one of these LIRGs, NGC1614, we performed a deep multiwavelength study, including data from radio, infrared, optical and X-rays. These data allowed us to establish that the the IR emission in the circumnuclear region is completely dominated by a powerful starburst and, in case it hosts an AGN, its contribution is irrelevant. We also performed an exploratory study where, using the Paschen! emission, we developed a method to isolate the two main component of the radio emission at 8.4 GHz: thermal and non-thermal (synchrotron). This decomposition allowed us to differentiate the ages at different regions, yielding to a better understanding of starburst processes. We also studied the massive star formation in the most luminous nearby LIRG, Arp 299, through the study of supernovae (SNe), both in its most luminous nucleus (Arp 299-A) and in its surroundings. We used radio data from the e-MERLIN interferometer, obtained for the LIRGI project (PIs: J. Conway & M.A. Perez-Torres), to discover the radio counterpart of supernova SN2010P. We used additional radio data at four frequencies, for a total of 13 epochs, and modeled the light curve of SN2010P, which allowed us to type it as a IIb, i.e., a stripped-envelope core-collapse supernova. Another supernova (SN2010O) exploded in the system a few days earlier, but did not show any radio emission despite our several attempts to detect it at different epochs. This radio-silence in late time observations is probably due to its rapid evolution, compatible with a Type Ib supernova. Regarding the study of SNe in the nuclear region of Arp 299-A, we used very long baseline interferometry (VLBI) radio techniques. We analyzed several epochs spanning 2.5 years using the European VLBI Network (EVN), which permitted us to confirm 25 compact sources, most of them SNe or SN remnants, and allowed us to derive a core-collapse SN rate of !0.8 SNyr-1, compatible with previous studies. We also found that most of the star formation in Arp 299-A is taking place in the inner 150 parsecs. Our final approach to the study of (U)LIRGs consists of the use of radio-VLBI techniques aimed at resolving the innermost regions of these galaxies, where massive and violent starbursts are taking place, and where their interaction with AGN is more evident. Since radio is not affected by dust extinction and given the very high angular resolution achieved with VLBI observations, this is the only technique with which we can perform such a deep study. We used SNe previously detected in the nuclei of three starburst galaxies, Arp 299-A, Arp 220, and M82, to determine (for the first time) their spatial distribution. Their radial distribution, which follows and exponential profile, has been thoroughly studied by other authors in galactic scales, but the nuclear regions have been systematically excluded from those studies due to the high angular resolution needed as well as the extreme dust extinction of these objects. Both issues can be overcome using radio-VLBI techniques. We found that the radial distribution of supernovae changes drastically in the innermost regions of these galaxies, yielding evidence for the existence of circumnuclear disks, proposed by theoretical models and whose sizes are compatible with those obtained by us. This work emphasizes the importance of a multiwavelength approach to study the mechanisms that play an important role in the star formation processes in (U)LIRGs.

GROUND-BASED Paα NARROW-BAND IMAGING OF LOCAL LUMINOUS INFRARED GALAXIES. I. STAR FORMATION RATES AND SURFACE DENSITIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tateuchi, Ken; Konishi, Masahiro; Motohara, Kentaro

2015-03-15

Luminous infrared galaxies (LIRGs) are enshrouded by a large amount of dust produced by their active star formation, and it is difficult to measure their activity in optical wavelengths. We have carried out Paα narrow-band imaging observations of 38 nearby star forming galaxies including 33 LIRGs listed in the IRAS Revised Bright Galaxy Sample catalog with the Atacama Near InfraRed camera on the University of Tokyo Atacama Observatory (TAO) 1.0 m telescope (miniTAO). Star formation rates (SFRs) estimated from the Paα fluxes, corrected for dust extinction using the Balmer decrement method (typically A{sub V} ∼ 4.3 mag), show a good correlation with thosemore » from the bolometric infrared luminosity of the IRAS data within a scatter of 0.27 dex. This suggests that the correction of dust extinction for the Paα flux is sufficient in our sample. We measure the physical sizes and surface densities of infrared luminosities (Σ{sub L(IR)}) and the SFR (Σ{sub SFR}) of star forming regions for individual galaxies, and we find that most of the galaxies follow a sequence of local ultra-luminous or luminous infrared galaxies (U/LIRGs) on the L(IR)-Σ{sub L(IR)} and SFR-Σ{sub SFR} plane. We confirm that a transition of the sequence from normal galaxies to U/LIRGs is seen at L(IR) = 8 × 10{sup 10} L {sub ☉}. Also, we find that there is a large scatter in physical size, different from normal galaxies or ULIRGs. Considering the fact that most U/LIRGs are merging or interacting galaxies, this scatter may be caused by strong external factors or differences in their merging stages.« less

VizieR Online Data Catalog: [U]LIRGs - on the trail of AGN's types (Malek+, 2017)

NASA Astrophysics Data System (ADS)

Malek, K.; Bankowicz, M.; Pollo, A.; Takeuchi, T. T.; Buat, V.; Burgarella, D.; Goto, T.; Malkan, M.

2016-11-01

Identifications and photometric flux densities in all available wavelengths for 39 [U]LIRGs found in the ADF-S survey. All 39 sources for which a counterpart in the 40" radius on the sky has been found in the public databases are listed. The serial ADF-S number, ADF-S coordinates, redshift and fluxes (in four far-infrared (FIR) AKARI bands (65, 90, 140 and 160um), as well as photometric fluxes densities and uncertainties for 16 more bands spanning spectra from FUV (GALEX) to FIR (Herschel/SPIRE) are given for each source. Flux value set to "---" represents unknown value. (1 data file).

Infrared to millimetre photometry of ultra-luminous IR galaxies: New evidence favouring a 3-stage dust model

NASA Astrophysics Data System (ADS)

Klaas, U.; Haas, M.; Müller, S. A. H.; Chini, R.; Schulz, B.; Coulson, I.; Hippelein, H.; Wilke, K.; Albrecht, M.; Lemke, D.

2001-12-01

Infrared to millimetre spectral energy distributions (SEDs) have been obtained for 41 bright ultra-luminous infrared galaxies (ULIRGs). The observations were carried out with ISOPHOT between 10 and 200 mu m and supplemented for 16 sources with JCMT/SCUBA at 450 and 850 mu m and with SEST at 1.3 mm. In addition, seven sources were observed at 1.2 and 2.2 mu m with the 2.2 m telescope on Calar Alto. These new SEDs represent the most complete set of infrared photometric templates obtained so far on ULIRGs in the local universe. The SEDs peak at 60-100 mu m and show often a quite shallow Rayleigh-Jeans tail. Fits with one single modified blackbody yield a high FIR opacity and small dust emissivity exponent beta < 2. However, this concept leads to conflicts with several other observational constraints, like the low PAH extinction or the extended filamentary optical morphology. A more consistent picture is obtained using several dust components with beta = 2, low to moderate FIR opacity and cool (50 K > T > 30 K) to cold (30 K > T > 10 K) temperatures. This provides evidence for two dust stages, the cool starburst dominated one and the cold cirrus-like one. The third stage with several hundred Kelvin warm dust is identified in the AGN dominated ULIRGs, showing up as a NIR-MIR power-law flux increase. While AGNs and SBs appear indistinguishable at FIR and submm wavelengths, they differ in the NIR-MIR. This suggests that the cool FIR emitting dust is not related to the AGN, and that the AGN only powers the warm and hot dust. In comparison with optical and MIR spectroscopy, a criterion based on the SED shapes and the NIR colours is established to reveal AGNs among ULIRGs. Also the possibility of recognising evolutionary trends among the ULIRGs via the relative amounts of cold, cool and warm dust components is investigated. Based on observations with the Infrared Space Observatory ISO, the James Clerk Maxwell Telescope JCMT, the Swedish ESO Submillimetre Telescope SEST and at the Calar Alto Observatory. ISO is an ESA project with instruments funded by ESA Member States (especially the PI countries France, Germany, The Netherlands and the UK) and with the participation of ISAS and NASA. Appendices A and B are only available in electronic form at http://www.edpsciences.com

The global star formation law of galaxies revisited in the radio continuum

NASA Astrophysics Data System (ADS)

Liu, LiJie; Gao, Yu

2012-02-01

We study the global star formation law, the relation between the gas and star formation rate (SFR) in a sample of 130 local galaxies with infrared (IR) luminosities spanning over three orders of magnitude (109-1012 L⊙), which includes 91 normal spiral galaxies and 39 (ultra)luminous IR galaxies [(U)LIRGs]. We derive their total (atomic and molecular) gas and dense molecular gas masses using newly available HI, CO and HCN data from the literature. The SFR of galaxies is determined from total IR (8-1000 μm) and 1.4 GHz radio continuum (RC) luminosities. The galaxy disk sizes are defined by the de-convolved elliptical Gaussian FWHM of the RC maps. We derive the galaxy disk-averaged SFRs and various gas surface densities, and investigate their relationships. We find that the galaxy disk-averaged surface density of dense molecular gas mass has the tightest correlation with that of SFR (scatter ˜0.26 dex), and is linear in log-log space (power-law slope of N=1.03±0.02) across the full galaxy sample. The correlation between the total gas and SFR surface densities for the full sample has a somewhat larger scatter (˜0.48 dex), and is best fit by a power-law with slope 1.45±0.02. However, the slope changes from ˜1 when only normal spirals are considered, to ˜1.5 when more and more (U)LIRGs are included in the fitting. When different CO-to-H2 conversion factors are used to infer molecular gas masses for normal galaxies and (U)LIRGs, the bi-modal relations claimed recently in CO observations of high-redshift galaxies appear to also exist in local populations of star-forming galaxies.

High Resolution Radio Observations Of Energetically Dominant Regions In Local Luminous Infrared Galaxies

NASA Astrophysics Data System (ADS)

Barcos-Munoz, Loreto

2016-07-01

Luminous and Ultra-luminous Infrared galaxies (U/LIRGs) are one of the most powerful classes of extragalactic objects in the local universe, and they provide a unique opportunity to study star formation and feedback processes in extreme environments. They are primarily observed to be interacting or merging disk galaxies. During the interaction, large amounts of gas are funneled to the central few kpc, triggering high star formation rates (SFR) and dust production. The absorption of UV and optical radiation from stars, or active galactic nuclei (AGN), by dust produces their observed high infrared luminosities.The high level of dust obscuration intrinsic to U/LIRGs makes them difficult to study. Radio interferometry is thus the perfect tool for revealing the nature of these systems - it provides the high spatial resolution needed to resolve energetically dominant regions in U/LIRGs at wavelengths that have both diagnostic power and transparency to dust. In this thesis, 6 and 33 GHz radio continuum interferometric observations with the upgraded Karl G. Jansky Very Large Array (VLA) are used to study a sample of 22 local U/LIRGs.First, a detailed analysis of the 6 and 33 GHz radio continuum emission from the closest ULIRG, Arp 220, is presented. This late stage merger is highly obscured, being optically thick even at mid-infrared wavelengths. Further, due to its extreme environment, it is often used as a template for high redshift starbursts. Arp 220 hosts two distinct nuclei that are separated by (\\sim) 370 pc. The nuclei are well resolved with the 33 GHz observations (i.e., with a spatial resolution of ˜ 30 pc). The deconvolved radii enclosing half of the total 33 GHz light are approximately 50 and 35 pc for the eastern and western nucleus, respectively. Literature values of the gas mass and infrared luminosity are combined with the 33 GHz sizes under the assumption of co-spatiality to show that Arp 220 has one of the highest molecular gas surface densities ((\\Sigma_mol \\sim 10^{5.3}) (east) and (10^{5.7}) (west) (\\mathrm{M_\\odot pc^{-2}})) and SFR surface densities ((\\mathrm{\\Sigma_{SFR} \\sim 10^{4.0} (east) and 10^{4.0} (west) M_{\\odot} yr^{-1} kpc^{-2}})) measured for any star-forming system. Despite these high values, the nuclei of Arp 220 are not maximal starbursts (i.e., under the assumption that the main feedback mechanism is radiation pressure on dust). The small derived sizes for the nuclei indicate Arp 220 is only optically thin in a narrow frequency range, (\\sim) 5 to 350 GHz.The analysis of a larger sample of 22 U/LIRGs at 33 GHz with the VLA is also presented. It is found that, for most of these galaxies, the integrated radio flux densities correlate well with those at infrared wavelengths, indicating these systems follow the radio-IR correlation and that the emission at 33 GHz is primarily produced by star formation activity. The radio emission from most of these galaxies are resolved, with deconvolved half-light radii ranging from 20 pc to 1.7 kpc. Similar assumptions for Arp 220 above are used here to estimate SFR surface densities of (\\Sigma_SFR) from (10^{0.5}) to (10^{4.5}) (\\mathrm{M_{\\odot} yr^{-1} kpc^{-2}}) and molecular gas surface densities (\\Sigma_mol) of (\\mathrm{10^{2.5} to 10^{5.7} M_{\\odot} pc^{-2}}). These values are among the highest values measured for any galaxies. The star formation-gas scaling relation is used to compare the U/LIRGs with regions within normal spiral galaxies. The presence of two ``modes" of star formation is inferred in the comparison, although this result is extremely dependent on the CO-to-({H_{2}}) conversion factor. The local U/LIRGs studied in this survey show high infrared surface brightnesses, however 19 of the 22 sources are not maximal starbursts. Finally, those targets showing the flattest 1.5-6 GHz spectral indices and the highest surface brightnesses exhibit the strongest [Cii] deficits, which supports the idea that deficit is associated with the most highly obscured, high energy density star-forming regions.In order to determine the true limit for star formation in galaxies (e.g., through Eddington limit analysis), better measures of the gas content, opacity and velocity dispersion of U/LIRGs are needed. The last study presented in this thesis is an analysis of the first high spatial resolution ALMA observations of the mm continuum and dense molecular gas tracers in Arp 220. A spatial resolution of 30 pc is achieved using the most extended configuration available in Cycle 3. An optically thin model of the spectral flux density distribution is found to predict the continuum emission at 92 GHz, within the uncertainties of the measurement and accounting for extended emission that is potentially filtered out. At 92 GHz, the western nucleus is dominated by dust emission, while the eastern nucleus by free-free emission. High critical gas density tracers HCN, HCO(^{+}), their isotopologues, and the shock tracer SiO are detected. P-Cygni profiles are observed in the central beam of both nuclei, with a cleaner profile shape in the eastern nucleus. The western nucleus shows strong absorption in the center, which makes determination of the profile line shapes more complicated. These P-Cygni features indicate the presence of outflowing gas. The derived mass loading factors are 18 (east) and 35 (west), which may be an indication that active galactic nuclei help to boost the outflow mass rates. However, these numbers are strongly dependent on the highly uncertain HCN-to-gas mass conversion factor and should only be considered as upper limits. In addition to signatures of outflowing gas, clear evidence of gas rotation in both nuclei are observed.

INTEGRAL Spectroscopy of IRAS 17208-0014: Implications for the Evolutionary Scenarios of Ultraluminous Infrared Galaxies

NASA Astrophysics Data System (ADS)

Arribas, Santiago; Colina, Luis

2003-07-01

New integral field optical fiber spectroscopy obtained with the INTEGRAL system, together with archival HST WFPC2 and NICMOS images, has been used to investigate the ultraluminous infrared galaxy (ULIRG) IRAS 17208-0014, one of the coldest and most luminous objects in the IRAS 1 Jy sample. We have found that the optical nucleus is not coincident with the true (near-IR and dynamical) nucleus, but that it is displaced by 1.3 kpc (1.5") from it. As a consequence, the previous optical spectral classifications for the nucleus of this galaxy have to be changed from H II to LINER. The ionized gas emission is concentrated around the optical nucleus, where a young (5-6 Myr), massive [(3+/-1)×108 Msolar], and luminous [(6+/-2)×1010 Lsolar] starburst is detected. Contrary to what is found in dynamically young ULIRGs, no strong line emission tracing star-forming regions, or tidal dwarf galaxies, is detected in the inner parts of the tidal tails. The two-dimensional gas velocity field identifies the optically faint K-band nucleus as the dynamical nucleus of the galaxy and shows that the 3 kpc, tilted (i~35deg) disk is rotating at Δvsini=250 km s-1. Radial motions of gas are found along the minor kinematic axis, which, according to the geometry of the system, are well interpreted as inflows perpendicular to the inner disk. The existence of such inflows supports the idea that, as a consequence of the merging process, gas is channeling from the external regions, several kiloparsecs away, into the nuclear regions where the massive starburst reported above is taking place. The kinematical, morphological, and photometric evidence presented here supports the idea that in IRAS 17208-0014 we are witnessing a luminous, cool ULIRG that is at the final coalescence phase of a system composed of two spiral galaxies with m<=m* and a mass ratio of ~2:1, each consisting of a disk+bulge internal structure, that have been involved in a prograde encounter. This system will most likely evolve into an intermediate-mass (~L*) elliptical galaxy. The multifrequency empirical evidence gathered so far shows no trace of a luminous QSO and indicates that starbursts dominate the energy output in this galaxy. Therefore, IRAS 17208-0014 does not follow the behavior expected in the ``ULIRG-to-QSO'' evolutionary scenario proposed by Sanders et al., but it supports the one recently proposed by Colina et al., in which two low-mass disk galaxies would produce luminous, cool ULIRGs that would not evolve into QSOs. The present study illustrates some caveats to bear in mind when studying high-z galaxies lacking two-dimensional spectral information of adequate linear resolution and shows that near- and mid-IR integral field spectroscopy is needed to derive the relevant astrophysical quantities. Based on observations with the William Herschel Telescope, operated on the island of La Palma by the ING in the Spanish Observatorio del Roque de los Muchachos of the Instituto de Astrofísica de Canarias. Based also on observations with the NASA/ESA Hubble Space Telescope (HST), obtained at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy (AURA), Inc., under NASA contract NAS 5-26555.

Characterizing the origin and impact of the most extreme molecular outflows in the nearby universe

NASA Astrophysics Data System (ADS)

Gowardhan, Avani; Riechers, Dominik A.; Spoon, Henrik; Farrah, Duncan

2018-01-01

Observations over the last decade have revealed that feedback in the form of molecular gas outflows is ubiquitous in local ultra luminous infrared galaxies (ULIRGs). Such outflows can clear the nuclear environments of gas and dust, quench star formation and active galactic nuclei (AGN) growth, and they are a key step in the evolution of dust-obscured AGN to optically luminous quasars. We here present multi-spectral line observations of feedback in the two most powerful molecular gas outflows in the local universe. We spatially resolve the outflows to determine their kinematics and structure and find that they can drive out the molecular gas and quench star formation within ~ few Myr. Applying mid-IR diagnostics to constrain the relative contributions of AGN and nuclear starburst activity, we find that starburst activity plays a significant role in driving the outflow. We discuss the implications for future studies of feedback in the local universe and obscured AGN at high redshift, which is a key target population for JWST and ALMA over the next decade.

Feeding, Feedback and the Growth of Galaxies - Molecules as Tools for Probing Galaxy Evolution

NASA Astrophysics Data System (ADS)

Aalto, Susanne

2017-06-01

Cold gas plays a central role in feeding and regulating star formation and growth of supermassive black holes (SMBH) in galaxy nuclei. Particularly powerful activity occurs when interactions of gas-rich galaxies funnel large amounts of gas and dust into nuclei of luminous and ultra luminous infrared galaxies (LIRGs/ULIRGs). These dusty objects are of key importance to galaxy mass assembly over cosmic time. Some (U)LIRGS have deeply embedded galaxy nuclei that harbour a very active evolutionary stage of AGNs and/or starbursts. The nuclear activity will often drive mechanical feedback in the form of molecular winds, jets and outflows. This feedback can for example remove baryons from low-mass galaxies, prevent overgrowth of galaxies, be linked to the M_{BH}-σ relation, and explain "red-and dead" properties of local ellipticals. With the ALMA and NOEMA telescopes we can use molecules as diagnostic tools to probe the properties of dust-enshrouded galaxy nuclei and their associated cold winds and outflows. Their morphology, velocity structure, physical conditions and even chemistry can be studied at unprecedented sensitivity and resolution, opening new avenues to further our understanding of the growth of galaxies. I will give a brief review of the ALMA/NOEMA view of AGN and starburst radiative and mechanical feedback, and how it is linked to the properties of the nuclear power source. I will discuss the use of molecules (e.g. H_2O, H_3O^{+}, HCN, HCO^+, H_2S) for studying dusty nuclei and the nature of the embedded activity. We can, for example, investigate ionization rates and the impact of cosmic ray-, X-ray- and PDR-chemistry and the onset of outflows and winds. Interestingly, in some deeply obscured nuclei the chemistry shows strong similarities to that of Galactic hot cores. Finally I will show peculiar molecular jets and very recent ALMA observations at resolutions of tens of milli-arcseconds (few pc) of vibrationally excited HCN in opaque nuclei. These regions offer both challenges and opportunities for IR and submm studies of the nature of the buried activity - which we suggest is a deeply dust-enshrouded SMBH in a high-accretion state, or an extreme, high-temperature, burst of star formation.

Extreme CO Isotopic Abundances in the ULIRG IRAS 13120-5453: An Extremely Young Starburst or Top-heavy Initial Mass Function

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sliwa, Kazimierz; Wilson, Christine D.; Aalto, Susanne

We present ALMA {sup 12}CO (J = 1-0, 3-2 and 6-5), {sup 13}CO (J = 1-0), and C{sup 18}O (J = 1-0) observations of the local ultraluminous infrared galaxy (ULIRG) IRAS 13120-5453. The morphologies of the three isotopic species differ, as {sup 13}CO shows a hole in emission toward the center. We measure integrated brightness temperature line ratios of {sup 12}CO/{sup 13}CO ≥ 60 (exceeding 200) and {sup 13}CO/C{sup 18}O ≤ 1 in the central region. Assuming optical thin emission, C{sup 18}O is more abundant than {sup 13}CO in several regions. The abundances within the central 500 pc are consistentmore » with the enrichment of the interstellar medium via a young starburst (<7 Myr), a top-heavy initial mass function, or a combination of both.« less

Multiwavelength Characterization of an ACT-selected, Lensed Dusty Star-forming Galaxy at z = 2.64

NASA Astrophysics Data System (ADS)

Roberts-Borsani, G. W.; Jiménez-Donaire, M. J.; Daprà, M.; Alatalo, K.; Aretxaga, I.; Álvarez-Márquez, J.; Baker, A. J.; Fujimoto, S.; Gallardo, P. A.; Gralla, M.; Hilton, M.; Hughes, J. P.; Jiménez, C.; Laporte, N.; Marriage, T. A.; Nati, F.; Rivera, J.; Sievers, A.; Weiß, A.; Wilson, G. W.; Wollack, E. J.; Yun, M. S.

2017-08-01

We present C I(2-1) and multi-transition 12CO observations of a dusty star-forming galaxy, ACT J2029+0120, which we spectroscopically confirm to lie at z = 2.64. We detect CO(3-2), CO(5-4), CO(7-6), CO(8-7), and C I(2-1) at high significance, tentatively detect HCO+(4-3), and place strong upper limits on the integrated strength of dense gas tracers (HCN(4-3) and CS(7-6)). Multi-transition CO observations and dense gas tracers can provide valuable constraints on the molecular gas content and excitation conditions in high-redshift galaxies. We therefore use this unique data set to construct a CO spectral line energy distribution (SLED) of the source, which is most consistent with that of a ULIRG/Seyfert or QSO host object in the taxonomy of the Herschel Comprehensive ULIRG Emission Survey. We employ RADEX models to fit the peak of the CO SLED, inferring a temperature of T ˜ 117 K and {n}{{{H}}2}˜ {10}5 cm-3, most consistent with a ULIRG/QSO object and the presence of high-density tracers. We also find that the velocity width of the C I line is potentially larger than seen in all CO transitions for this object, and that the {L}{{C} {{I}}(2-1)}\\prime /{L}{CO(3-2)}\\prime ratio is also larger than seen in other lensed and unlensed submillimeter galaxies and QSO hosts; if confirmed, this anomaly could be an effect of differential lensing of a shocked molecular outflow.

Starburst or AGN dominance in submm-luminous candidate AGN

NASA Astrophysics Data System (ADS)

Coppin, Kristen; Alexander, Dave; Aretxaga, Itziar; Blain, Andrew; Chapman, Scott; Clements, Dave; Dunlop, James; Dunne, Loretta; Dye, Simon; Farrah, Duncan; Hughes, David; Ivison, Rob; Kim, Sungeun; Menendez-Delmestre, Karin; Oliver, Sebastian; Page, Mat; Pope, Alexandra; Rowan-Robinson, Michael; Scott, Douglas; Smail, Ian; Swinbank, Mark; Vaccari, Mattia; van Kampen, Eelco

2008-03-01

It is widely believed that starbursts/ULIRGs and AGN activity are triggered by galaxy interactions and merging; and sub-mm selected galaxies (SMGs) seem to be simply high redshift ULIRGs, observed near the peak of activity. In this evolutionary picture every SMG would host an AGN, which would eventually grow a black hole strong enough to blow off all of the gas and dust leaving an optically luminous QSO. In order to probe this evolutionary sequence, a crucial sub-sample to focus on would be the 'missing link' sources, which demonstrate both strong starburst and AGN signatures and to determine if the starburst is the main power source even in SMGs when we have evidence that an AGN is present. The best way to determine if a dominant AGN is present is to look in the mid-IR for their signatures, since often even deep X-ray observations miss identifying the presence of AGN in heavily dust-obscured SMGs. We have selected a sample of SMGs which are good candidates for harboring powerful AGN on the basis of their IRAC colours (S8um/S4.5um>2). Once we confirm these SMGs are AGN-dominated, we can then perform an audit of the energy balance between star-formation and AGN within this special sub-population of SMGs where the BH has grown appreciably to begin heating the dust emission. The proposed observations with IRS will probe the physics of how SMGs evolve from a cold-dust starburst-dominated ULIRG to an AGN/QSO by measuring the level of the mid-IR continuum, PAH luminosity, and Si absorption in these intermediate `transitory' AGN/SMGs.

HERUS: A CO ATLAS FROM SPIRE SPECTROSCOPY OF LOCAL ULIRGs

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pearson, Chris; Rigopoulou, Dimitra; Hurley, Peter

We present the Herschel SPIRE Fourier Transform Spectroscopy (FTS) atlas for a complete flux-limited sample of local ultraluminous infrared galaxies (ULIRGs) as part of the HERschel Ultra Luminous InfraRed Galaxy Survey (HERUS). The data reduction is described in detail and was optimized for faint FTS sources ,with particular care being taken for the subtraction of the background, which dominates the continuum shape of the spectra. To improve the final spectra, special treatment in the data reduction has been given to any observation suffering from artifacts in the data caused by anomalous instrumental effects. Complete spectra are shown covering 200–671 μmore » m, with photometry in the SPIRE bands at 250, 350, and 500 μ m. The spectra include near complete CO ladders for over half of our sample, as well as fine structure lines from [C i] 370 μ m, [C i] 609 μ m, and [N ii] 205 μ m. We also detect H{sub 2}O lines in several objects. We construct CO spectral line energy distributions (SLEDs) for the sample, and compare their slopes with the far-infrared (FIR) colors and luminosities. We show that the CO SLEDs of ULIRGs can be broadly grouped into three classes based on their excitation. We find that the mid- J (5 <  J  < 8) lines are better correlated with the total FIR luminosity, suggesting that the warm gas component is closely linked to recent star formation. The higher J transitions do not linearly correlate with the FIR luminosity, consistent with them originating in hotter, denser gas that is unconnected to the current star formation. We conclude that in most cases more than one temperature component is required to model the CO SLEDs.« less

Observing the Birth and evolution of Galaxies - the ATCA-AKARI-ASTE/AzTEC deep South Ecliptic Pole Field

NASA Astrophysics Data System (ADS)

White, Glenn; Kohno, Kotaro; Matsuhara, Hideo; Matsuura, Shuji; Hanami, Hitoshi; Lee, Hyung Mok; Pearson, Chris; Takagi, Toshi; Serjeant, Stephen; Jeong, Woongseob; Oyabu, Shinki; Shirahata, Mai; Nakanishi, Kouichiro; Figueredo, Elysandra; Etxaluze, Mireya

2007-04-01

We propose deep 20 cm observations supporting the AKARI (3-160 micron)/ASTE/AzTEC (1.1 mm) SEP ultra deep ('Oyabu Field') survey of an extremely low cirrus region at the South Ecliptic Pole. Our combined IR/mm/Radio survey addresses the questions: How do protogalaxies and protospheroids form and evolve? How do AGN link with ULIRGs in their birth and evolution? What is the nature of the mm/submm extragalactic source population? We will address these by sampling the star formation history in the early universe to at least z~2. Compared to other Deep Surveys, a) AKARI multi-band IR measurements allow precision photo-z estimates of optically obscured objects, b) our multi-waveband contiguous area will mitigate effects of cosmic variance, c) the low cirrus noise at the SEP (< 0.08 MJy/sr) rivals that of the Lockman Hole "Astronomy's other ultra-deep 'cosmological window'", and d) our coverage of four FIR bands will characterise the far-IR dust emission hump of our starburst galaxies better than SPITZER's two MIPS bands allow. The ATCA data are crucial to galaxy identification, and determining the star formation rates and intrinsic luminosities through this unique Southern cosmological window.

Mid-Infrared Properties of the Swift Burst Alert Telescope Active Galactic Nuclei Sample of the Local Universe. 1. Emission-Line Diagnostics

DTIC Science & Technology

2010-06-20

reserved. Printed in the U.S.A. MID-INFRARED PROPERTIES OF THE SWIFT BURST ALERT TELESCOPE ACTIVE GALACTIC NUCLEI SAMPLE OF THE LOCAL UNIVERSE . I. EMISSION... the AGNs. We also compare the mid-infrared emission lines in the BAT AGNs with those from published studies of ULIRGs, Palomar- Green quasars, star...supermassive black holes (e.g., Rees 1984; Peterson et al. 2004). One way to approach the study of AGNs is to concentrate on those in the local universe

The Inner Structure of OH Megamaser Galaxies: The Genesis of the Unified Scheme of Active Galactic Nuclei

NASA Astrophysics Data System (ADS)

Axon, David

OH megamaser galaxies (OHMG) represent a key post-merger phase in the evolution of the Ultra-Luminous Infrared Galaxies (ULIRGs) population, in which an edge-on circum-nuclear gas disk (proto-torus) has already formed. Detailed interferometric mapping of maser sources implies that they originate in dense edge-on rotating molecular gas within a few tens of parsecs of the AGN. In addition, the OH lines are often broad (Doppler widths ~ 1000 km/s), implying large dynamical masses in the central few parsecs. In many systems the OH lines also show high velocity asymmetric tails suggesting large-scale outflows that could be clearing away enshrouding dense molecular material. Taken together this evidence points to a picture in which an OHMG hosts a nascent QSO surrounded by a flattened distribution of dense molecular gas that is in the process of being cleared away along the rotation axis of the maser disk. A great advantage of studying OHMG systems over the general ULIRG population is that the circum-nuclear disks are effectively "fixed" at an edge on orientation, thereby breaking the degeneracy between the number of clumps and inclination in state of the art clumpy torus models. We have been awarded HST time in cycle 17 to conduct a comprehensive study of structure of the circum-nuclear gas, and its relationship to the radio structure and that of the maser disk, of large sample (80) of OHMG. This work is supported by ground-based spectropolarimetry, integral field spectroscopy and new radio continuum observations, Our overall objective is to probe the final stages of evolution immediately before the full- emergence of an enshrouded AGN as the circum-nuclear dust is dispersed by starburst and AGN-induced outflows. The specific scientific goals of this ADP proposal are to retrieve and analyze the Spitzer thermal-IR 5-70 micron imaging and IRS spectra of the subset of 72 of our targets for which Spitzer observations are available in the archive. We aim to establish the relationship between host and circum-nuclear ionized gas and dust structures in different OHMG spectroscopic types (AGN, Starburst, Composite) and model the AGN and starburst contributions to the mid-IR SED. Combining these with our other data we will address a number of important questions: is the mid-IR SED consistent with an edge-on circum-nuclear dust structure, as expected from the maser observations? What is the relative orientation of the Maser molecular structure and the ionized gas? Is there a connection between AGN heating of the circum-nuclear dust and wind or radiation driven outflows from the nucleus? How does the bolometric luminosity of the AGN relate to the OH line luminosity, FWHM and line shape? In turn these will relate the ionizing luminosity to the covering factor of the torus and the enclosed dynamical mass. When complete, this study should provide new insights on the relationships between the fundamental physical parameters of the AGN, including black hole mass, accretion and mass outflow rates, and the large scale properties of the host galaxy.

Quantifying the AGN-driven outflows in ULIRGs (QUADROS) III: Measurements of the radii and kinetic powers of 8 near-nuclear outflows

NASA Astrophysics Data System (ADS)

Spence, R. A. W.; Tadhunter, C. N.; Rose, M.; Rodríguez Zaurín, J.

2018-05-01

As part of the QUADROS project to quantify the impact of AGN-driven outflows in rapidly evolving galaxies in the local universe, we present observations of 8 nearby ULIRGs (0.04 < z < 0.2) taken with the ISIS spectrograph on the William Herschel Telescope (WHT), and also summarize the results of the project as a whole. Consistent with Rose et al. (2018), we find that the outflow regions are compact (0.08 < R_{[O III]} < 1.5 kpc), and the electron densities measured using the [S II], [O II] trans-auroral emission-line ratios are relatively high (2.5 < log ne (cm-3) < 4.5, median log ne (cm-3) ˜ 3.1). Many of the outflow regions are also significantly reddened (median E(B - V) ˜ 0.5). Assuming that the de-projected outflow velocities are represented by the 5^{th} percentile velocities (v05) of the broad, blueshifted components of [O III] λ5007, we calculate relatively modest mass outflow rates (0.1 < \\dot{M} < 20 M⊙ yr-1, median \\dot{M} ˜ 2 M⊙ yr-1), and find kinetic powers as a fraction of the AGN bolometric luminosity (\\dot{F} = \\dot{E}/L_bol) in the range 0.02 < \\dot{F} < 3 per cent, median \\dot{F} ˜ 0.3 per cent). The latter estimates are in line with the predictions of multi-stage outflow models, or single-stage models in which only a modest fraction of the initial kinetic power of the inner disk winds is transferred to the larger-scale outflows. Considering the QUADROS sample as a whole, we find no clear evidence for correlations between the properties of the outflows and the bolometric luminosities of the AGN, albeit based on a sample that covers a relatively small range in Lbol. Overall, our results suggest that there is a significant intrinsic scatter in outflow properties of ULIRGs for a given AGN luminosity.

A low-luminosity type-1 QSO sample . IV. Molecular gas contents and conditions of star formation in three nearby Seyfert galaxies

NASA Astrophysics Data System (ADS)

Moser, Lydia; Krips, Melanie; Busch, Gerold; Scharwächter, Julia; König, Sabine; Eckart, Andreas; Smajić, Semir; García-Marin, Macarena; Valencia-S., Mónica; Fischer, Sebastian; Dierkes, Jens

2016-03-01

We present a pilot study of ~3'' resolution observations of low CO transitions with the Submillimeter Array in three nearby Seyfert galaxies, which are part of the low-luminosity quasi-stellar object (LLQSOs) sample consisting of 99 nearby (z = 0.06) type-1 active galactic nuclei (AGN) taken from the Hamburg/ESO quasi-stellar object (QSO) survey. Two sources were observed in 12CO(2-1) and 13CO(2-1) and the third in 12CO(3-2) and HCO+(4-3). None of the sources is detected in continuum emission. More than 80% of the 12CO detected molecular gas is concentrated within a diameter (FWHM) < 1.8 kpc. 13CO is tentatively detected, while HCO+ emission could not be detected. All three objects show indications of a kinematically decoupled central unresolved molecular gas component. The molecular gas masses of the three galaxies are in the range Mmol = (0.7-8.7) × 109M⊙. We give lower limits for the dynamical masses of Mdyn> 1.5 × 109M⊙ and for the dust masses of Mdust> 1.6 × 106M⊙. The R21 = 12CO/13CO(2-1) line luminosity ratios show Galactic values of R21 ~ 5-7 in the outskirts and R21 ≳ 20 in the central region, similar to starbursts and (ultra)luminous infrared galaxies ((U)LIRGs; I.e. LIRGs and ULIRGs), implying higher temperatures and stronger turbulence. All three sources show indications of 12CO(2-1)/12CO(1-0) ratios of ~0.5, suggesting a cold or diffuse gas phase. Strikingly, the 12CO(3-2)/(1-0) ratio of ~1 also indicates a higher excited phase. Since these galaxies have high infrared luminosities of LIR ≥ 1011L⊙ and seem to contain a circumnuclear starburst with minimum surface densities of gas and star formation rate (SFR) around Σmol = 50-550 M⊙pc-2 and ΣSFR = 1.1-3.1 M⊙ kpc-2 yr-1, we conclude that the interstellar medium in the centers of these LIRG Seyferts is strongly affected by violent star formation and better described by the ULIRG mass conversion factor.

MAJOR-MERGER GALAXY PAIRS IN THE COSMOS FIELD-MASS-DEPENDENT MERGER RATE EVOLUTION SINCE z = 1

DOE Office of Scientific and Technical Information (OSTI.GOV)

Xu, C. Kevin; Zhao, Yinghe; Gao, Y.

2012-03-10

We present results of a statistical study of the cosmic evolution of the mass-dependent major-merger rate since z = 1. A stellar mass limited sample of close major-merger pairs (the CPAIR sample) was selected from the archive of the COSMOS survey. Pair fractions at different redshifts derived using the CPAIR sample and a local K-band-selected pair sample show no significant variations with stellar mass. The pair fraction exhibits moderately strong cosmic evolution, with the best-fitting function of f{sub pair} = 10{sup -1.88({+-}0.03)}(1 + z){sup 2.2({+-}0.2)}. The best-fitting function for the merger rate is R{sub mg} (Gyr{sup -1}) = 0.053 Multiplication-Signmore » (M{sub star}/10{sup 10.7} M{sub Sun} ){sup 0.3}(1 + z){sup 2.2}/(1 + z/8). This rate implies that galaxies of M{sub star} {approx} 10{sup 10}-10{sup 11.5} M{sub Sun} have undergone {approx}0.5-1.5 major mergers since z = 1. Our results show that, for massive galaxies (M{sub star} {>=} 10{sup 10.5} M{sub Sun }) at z {<=} 1, major mergers involving star-forming galaxies (i.e., wet and mixed mergers) can account for the formation of both ellipticals and red quiescent galaxies (RQGs). On the other hand, major mergers cannot be responsible for the formation of most low mass ellipticals and RQGs of M{sub star} {approx}< 10{sup 10.3} M{sub Sun }. Our quantitative estimates indicate that major mergers have significant impact on the stellar mass assembly of the most massive galaxies (M{sub star} {>=} 10{sup 11.3} M{sub Sun }), but for less massive galaxies the stellar mass assembly is dominated by the star formation. Comparison with the mass-dependent (ultra)luminous infrared galaxies ((U)LIRG) rates suggests that the frequency of major-merger events is comparable to or higher than that of (U)LIRGs.« less

The active nucleus of the ULIRG IRAS F00183-7111 viewed by NuSTAR

NASA Astrophysics Data System (ADS)

Iwasawa, K.; Spoon, H. W. W.; Comastri, A.; Gilli, R.; Lanzuisi, G.; Piconcelli, E.; Vignali, C.; Brusa, M.; Puccetti, S.

2017-10-01

We present an X-ray study of the ultra-luminous infrared galaxy IRAS F00183-7111 (z = 0.327), using data obtained from NuSTAR, Chandra X-ray Observatory, Suzaku and XMM-Newton. The Chandra imaging shows that a point-like X-ray source is located at the nucleus of the galaxy at energies above 2 keV. However, the point source resolves into diffuse emission at lower energies, extending to the east, where the extranuclear [Oiii]λ5007 emission, presumably induced by a galactic-scale outflow, is present. The nuclear source is detected by NuSTAR up to the rest-frame 30 keV. The strong, high-ionization Fe K line, first seen by XMM-Newton, and subsequently by Suzaku and Chandra, is not detected in the NuSTAR data. The line flux appears to have been declining continuously between 2003 and 2016, while the continuum emission remained stable to within 30%. Further observations are needed to confirm this. The X-ray continuum below 10 keV is characterised by a hard spectrum caused by cold absorption of NH 1 × 1023 cm-2, compatible to that of the silicate absorption at 9.7 μm, and a broad absorption feature around 8 keV which we attribute to a high-ionization Fe K absorption edge. The latter is best described by a blueshifted, high-ionization (log ξ 3) absorber with a column density of NH 1 × 1024 cm-2, similar to the X-ray high-velocity outflows observed in a number of active nuclei. No extra hard component, which would arise from a strongly absorbed (I.e. Compton-thick) source, is seen in the NuSTAR data. While a pure reflection scenario (with a totally hidden central source) is viable, direct emission from the central source of L2-10 keV ≃ 2 × 1044 erg s-1, behind layers of cold and hot absorbing gas may be an alternative explanation. In this case, the relative X-ray quietness (Lx/Lbol,AGN ≤ 6 × 10-3), the high-ionization Fe line, strong outflows inferred from various observations, and other similarities to the well-studied ULIRG/QSO Mrk 231 point that the central source in this ULIRG might be accreting close to the Eddington limit. This research has also made use of data obtained from ESO telescopes at the La Silla Paranal Observatory. The ESO VLT data are under programme IDs 386.B-0346, 088.B-0405, and 090.B-0098.

Achieving BLISS: Challenges for Building Fast, Ultra-Sensitive Transition-Edge Sensors

NASA Technical Reports Server (NTRS)

Beyer, Andrew D.; Runyan, M. C.; Kenyon, M.; Echternach, P. M .; Chui, T.; Bumble, B.; Bradford, C. M.; Holmes, W. A.; Bock, J. J.

2012-01-01

Topics: 1.Motivation and Intro to TESs. 2. BLISS Specifications-tolerance to dark power. 3.Measuring stray (dark) power-Tc (alpha) and G measurements. a) Overview two methods: JTD vs. TES. b) TES arrays: measurement and complications for Pd, Tc, and alpha. 4. Results: Pd compare, NEP, tau, 1/f issues. LIRGs and ULIRGs: Excellent example of distinct optical/UV and IR luminosity. Interaction long known, but huge luminosity is not predicted based on optical studies. (greater than 90% of the energy is emitted at in the far-IR). Large luminosity has both starburst and accretion components.

WISE infrared properties of OH megamaser galaxies: Guide for future FAST OHM searching?

NASA Astrophysics Data System (ADS)

Zhang, JiangShui; Wang, JunZhi; Li, Di

2015-08-01

All 119 OH maser galaxies (110 out of them are megamasers, i.e., LOH > 10 Lsun) published so far were compiled and were cross-identified with the Wide-Field Infrared Survey Explorer (WISE) catalog, to investigate the middle infrared (MIR) properties of OH maser galaxies. The WISE magnitude data at the 3.4, 4.6, 12 and 22 μm (W1 to W4 band) were collected for the OH maser sample and one control sample, which are non-detection sources. The color-color diagrams show that both OH megamaser (OHM) and non-OHM (ultra)luminous infrared galaxies ((U)LIRGs) are far away from the single blackbody model line and many of them can follow the path described by the power-law model. The active galaxy nuclei (AGN) fraction is about 40% for both OHM and non-OHM (U)LIRGs, according to the AGN criteria W1-W2 ≥ 0.8. Among the Arecibo survey sample, OHM sources tend to have a lower luminosity at short MIR wavelengths (e.g., 3.4 μm and 4.6 μm) than that of non-OHM sources, which should come from the low OHM fraction among the survey sample with large 3.4 μm and 4.6 μm luminosity. The OHM fraction tends to increase with cooler MIR colors (larger F22 μm/F3.4 μm). In the case of the power-law model, we derived the spectral indices for our samples. For the Arecibo survey sample, OHM (U)LIRGs tend to have larger spectral index α22-12 than non-OHM sources, which agrees with previous results. One significant correlation exists between the WISE infrared luminosity at 22 μm and the color [W1]-[W4] for the Arecibo OHM hosts. In summary, these clues should provide suitable constraints on the sample selection for future OH megamaser surveys through the Five hundred aperture spherical telescope (FAST). Further potentials on FAST OH megamasers research are investigated, including detectability, sky density of OH megamasers etc.

MEASURING STAR FORMATION RATES AND FAR-INFRARED COLORS OF HIGH-REDSHIFT GALAXIES USING THE CO(7–6) AND [N II] 205 μm LINES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lu, Nanyao; Zhao, Yinghe; Xu, C. Kevin

2015-03-20

To better characterize the global star formation activity in a galaxy, one needs to know not only the star formation rate (SFR) but also the rest-frame, far-infrared color (e.g., the 60–100 μm color, C(60/100)) of the dust emission. The latter probes the average intensity of the dust heating radiation field and scales statistically with the effective SFR surface density in star-forming galaxies including (ultra-)luminous infrared galaxies ((U)LIRGs). To this end, here we exploit a new spectroscopic approach involving only two emission lines: CO(7–6) at 372 μm and [N ii] at 205 μm([N ii]{sub 205μm}). For local (U)LIRGs, the ratios ofmore » the CO(7–6) luminosity (L{sub CO(7–6)}) to the total infrared luminosity (L{sub IR}; 8–1000 μm) are fairly tightly distributed (to within ∼0.12 dex) and show little dependence on C(60/100). This makes L{sub CO(7–6)} a good SFR tracer, which is less contaminated by active galactic nuclei than L{sub IR} and may also be much less sensitive to metallicity than L{sub CO(1–0)}. Furthermore, the logarithmic [N ii]{sub 205μm}/CO(7–6) luminosity ratio depends fairly strongly (at a slope of ∼ −1.4) on C(60/100), with a modest scatter (∼0.23 dex). This makes it a useful estimator on C(60/100) with an implied uncertainty of ∼0.15 (or ≲4 K in the dust temperature (T{sub dust}) in the case of a graybody emission with T{sub dust} ≳ 30 K and a dust emissivity index β ≥ 1). Our locally calibrated SFR and C(60/100) estimators are shown to be consistent with the published data of (U)LIRGs of z up to ∼6.5.« less

Quasar Feedback in the Ultraluminous Infrared Galaxy F11119+3257: Connecting the Accretion Disk Wind with the Large-scale Molecular Outflow

NASA Astrophysics Data System (ADS)

Veilleux, S.; Bolatto, A.; Tombesi, F.; Meléndez, M.; Sturm, E.; González-Alfonso, E.; Fischer, J.; Rupke, D. S. N.

2017-07-01

In Tombesi et al., we reported the first direct evidence for a quasar accretion disk wind driving a massive (>100 M ⊙ yr-1) molecular outflow. The target was F11119+3257, an ultraluminous infrared galaxy (ULIRG) with unambiguous type 1 quasar optical broad emission lines. The energetics of the accretion disk wind and molecular outflow were found to be consistent with the predictions of quasar feedback models where the molecular outflow is driven by a hot energy-conserving bubble inflated by the inner quasar accretion disk wind. However, this conclusion was uncertain because the mass outflow rate, momentum flux, and mechanical power of the outflowing molecular gas were estimated from the optically thick OH 119 μm transition profile observed with Herschel. Here, we independently confirm the presence of the molecular outflow in F11119+3257, based on the detection of ˜±1000 km s-1 blue- and redshifted wings in the CO(1-0) emission line profile derived from deep ALMA observations obtained in the compact array configuration (˜2.″8 resolution). The broad CO(1-0) line emission appears to be spatially extended on a scale of at least ˜7 kpc from the center. Mass outflow rate, momentum flux, and mechanical power of (80-200) {R}7-1 M ⊙ yr-1, (1.5-3.0) {R}7-1 L AGN/c, and (0.15-0.40)% {R}7-1 {L}{AGN}, respectively, are inferred from these data, assuming a CO-to-H2 conversion factor appropriate for a ULIRG (R 7 is the radius of the outflow normalized to 7 kpc, and L AGN is the AGN luminosity). These rates are time-averaged over a flow timescale of 7 × 106 yr. They are similar to the OH-based rates time-averaged over a flow timescale of 4 × 105 yr, but about a factor of 4 smaller than the local (“instantaneous” ≲105 yr) OH-based estimates cited in Tombesi et al. The implications of these new results are discussed in the context of time-variable quasar-mode feedback and galaxy evolution. The need for an energy-conserving bubble to explain the molecular outflow is also reexamined.

AKARI IRC 2.5-5 μm spectroscopy of infrared galaxies over a wide luminosity range

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ichikawa, Kohei; Ueda, Yoshihiro; Imanishi, Masatoshi

2014-10-20

We present the result of a systematic infrared 2.5-5 μm spectroscopic study of 22 nearby infrared galaxies over a wide infrared luminosity range (10{sup 10} L {sub ☉} < L {sub IR} < 10{sup 13} L {sub ☉}) obtained from the AKARI Infrared Camera (IRC). The unique band of the AKARI IRC spectroscopy enables us to access both the 3.3 μm polycyclic aromatic hydrocarbon (PAH) emission feature from star-forming activity and the continuum of torus-dust emission heated by an active galactic nucleus (AGN). Applying our AGN diagnostics to the AKARI spectra, we discover 14 buried AGNs. The large fraction ofmore » buried AGNs suggests that AGN activity behind the dust is almost ubiquitous in ultra-/luminous infrared galaxies (U/LIRGs). We also find that both the fraction and energy contribution of buried AGNs increase with infrared luminosity from 10{sup 10} L {sub ☉} to 10{sup 13} L {sub ☉}, including normal infrared galaxies with L {sub IR} < 10{sup 11} L {sub ☉}. The energy contribution from AGNs in the total infrared luminosity is only ∼7% in LIRGs and ∼20% in ULIRGs, suggesting that the majority of the infrared luminosity originates from starburst activity. Using the PAH emission, we investigate the luminosity relation between star formation and AGNs. We find that these infrared galaxies exhibit higher star formation rates than optically selected Seyfert galaxies with the same AGN luminosities, implying that infrared galaxies could be an early evolutionary phase of AGN.« less

Probing highly obscured, self-absorbed galaxy nuclei with vibrationally excited HCN

NASA Astrophysics Data System (ADS)

Aalto, S.; Martín, S.; Costagliola, F.; González-Alfonso, E.; Muller, S.; Sakamoto, K.; Fuller, G. A.; García-Burillo, S.; van der Werf, P.; Neri, R.; Spaans, M.; Combes, F.; Viti, S.; Mühle, S.; Armus, L.; Evans, A.; Sturm, E.; Cernicharo, J.; Henkel, C.; Greve, T. R.

2015-12-01

We present high resolution (0.̋4) IRAM PdBI and ALMA mm and submm observations of the (ultra) luminous infrared galaxies ((U)LIRGs) IRAS 17208-0014, Arp220, IC 860 and Zw049.057 that reveal intense line emission from vibrationally excited (ν2 = 1) J = 3-2 and 4-3 HCN. The emission is emerging from buried, compact (r< 17-70 pc) nuclei that have very high implied mid-infrared surface brightness > 5 × 1013 L⊙ kpc-2. These nuclei are likely powered by accreting supermassive black holes (SMBHs) and/or hot (>200 K) extreme starbursts. Vibrational, ν2 = 1, lines of HCN are excited by intense 14 μm mid-infrared emission and are excellent probes of the dynamics, masses, and physical conditions of (U)LIRG nuclei when H2 column densities exceed 1024 cm-2. It is clear that these lines open up a new interesting avenue to gain access to the most obscured AGNs and starbursts. Vibrationally excited HCN acts as a proxy for the absorbed mid-infrared emission from the embedded nuclei, which allows for reconstruction of the intrinsic, hotter dust SED. In contrast, we show strong evidence that the ground vibrational state (ν = 0), J = 3-2and 4-3 rotational lines of HCN and HCO+ fail to probe the highly enshrouded, compact nuclear regions owing to strong self- and continuum absorption. The HCN and HCO+ line profiles are double-peaked because of the absorption and show evidence of non-circular motions - possibly in the form of in- or outflows. Detections of vibrationally excited HCN in external galaxies are so far limited to ULIRGs and early-type spiral LIRGs, and we discuss possible causes for this. We tentatively suggest that the peak of vibrationally excited HCN emission is connected to a rapid stage of nuclear growth, before the phase of strong feedback. Based on observations carried out with the IRAM Plateau de Bure and ALMA Interferometers. IRAM is supported by INSU/CNRS (France), MPG (Germany), and IGN (Spain). ALMA is a partnership of ESO (representing its member states), NSF (USA), and NINS (Japan), together with NRC (Canada) and NSC and ASIAA (Taiwan), in cooperation with the Republic of Chile. The Joint ALMA Observatory is operated by ESO, AUI/NRAO, and NAOJ.

Combining physical galaxy models with radio observations to constrain the SFRs of high-z dusty star-forming galaxies

NASA Astrophysics Data System (ADS)

Lo Faro, B.; Silva, L.; Franceschini, A.; Miller, N.; Efstathiou, A.

2015-03-01

We complement our previous analysis of a sample of z ˜ 1-2 luminous and ultraluminous infrared galaxies [(U)LIRGs], by adding deep Very Large Array radio observations at 1.4 GHz to a large data set from the far-UV to the submillimetre, including Spitzer and Herschel data. Given the relatively small number of (U)LIRGs in our sample with high signal-to-noise (S/N) radio data, and to extend our study to a different family of galaxies, we also include six well-sampled near-infrared (near-IR)-selected BzK galaxies at z ˜ 1.5. From our analysis based on the radtran spectral synthesis code GRASIL, we find that, while the IR luminosity may be a biased tracer of the star formation rate (SFR) depending on the age of stars dominating the dust heating, the inclusion of the radio flux offers significantly tighter constraints on SFR. Our predicted SFRs are in good agreement with the estimates based on rest-frame radio luminosity and the Bell calibration. The extensive spectrophotometric coverage of our sample allows us to set important constraints on the star formation (SF) history of individual objects. For essentially all galaxies, we find evidence for a rather continuous SFR and a peak epoch of SF preceding that of the observation by a few Gyr. This seems to correspond to a formation redshift of z ˜ 5-6. We finally show that our physical analysis may affect the interpretation of the SFR-M⋆ diagram, by possibly shifting, with respect to previous works, the position of the most dust obscured objects to higher M⋆ and lower SFRs.

The ISO View of Palomar-Green Quasars

NASA Technical Reports Server (NTRS)

Haas, M.; Klaas, U.; Mueller, S. A. H.; Bertoldi, F.; Camenzind, M.; Chini, R.; Krause, O.; Lemke, D.; Meisenheimer; Richards, P. J.

2003-01-01

Mining the ISO data archive we provide the complete ISO view of PG quasars containing 64 infrared spectral energy distributions between 5 and 200 mu m. About half of the sample was supplemented by MAMBO and SCUBA (sub-)millimeter data. Since the PG quasars were selected optically, the high infrared detection rate of more than 80% suggests that every quasar possesses luminous to hyper-luminous dust emission with dust masses comparable to Seyferts and ultra-luminous IR galaxies (ULIRGs). The gas to-dust mass ratio (of those sources where CO measurements are available in the literature) is consistent with the galactic value providing further evidence for the thermal nature of the IR emission of radio quiet quasars. The SEDs represent templates of unprecedented detail and sensitivity. We suggest that the diversity of the SEDs reflects largely the evolution of the dust distribution, and we propose a classification of the SED shapes as well as an evolutionary scheme in which this variety can be understood. During the evolution the surrounding dust redistributes, settling more and more into a torus/disk like configuration, while the SEDs show an initial FIR bump, then an increasing MIR emission and a steeper near- to mid-infrared slope, both of which finally also decrease. Regarding cosmic evolution, our hyper-luminous quasars in the "local" universe at z=l do not show the hyper-luminous (LFIR >? 10(exp 13) L(sub sun)) starburst activity inferred for z=4 quasars detected in several (sub-)millimeter surveys. In view of several caveats this difference should be established further, but it already suggests that in the early dense universe stronger merger events led to more powerful starbursts accompanying the quasar phenomenon, while at later cosmic epochs any coeval starbursts obviously do not reach that high power and are outshone by the AGN. Additional information is included in the original extended abstract.

Selection and Physical Properties of High-redshift Galaxies

NASA Astrophysics Data System (ADS)

Fang, G. W.

2014-09-01

Extremely Red Objects (EROs) and BzKs continue to attract considerable interest. It has been suggested that they may be the direct progenitors of present-day massive E/S0 galaxies, and can provide crucial constraints on the current galaxy formation and evolution models. Therefore, the key question is to measure the relative fraction of OGs (old galaxies) and DGs (young, and dusty starburst galaxies) in the sample of EROs. Many groups have been currently investigating the fractions of these two ERO populations using a variety of observational approaches, but the fraction of OGs and DGs from different surveys is different. In the meantime, a number of observations suggest that the epoch of z˜2 also plays an important role in galaxy formation and evolution for various reasons: the cosmic star formation rate density (SFRD) begins to drop at z˜2 from a flat plateau at higher redshifts; the morphological type mix of field galaxies changes remarkably at z˜2; the number density of QSOs has a peak at z˜2; and about 50% to 70% of the stellar mass assembly of galaxies took place in the redshift range 12.7) at z˜2 in the AEGIS field (K_{AB} < 22.0). The number counts of pgzKs in our sample turn over at K_{AB} ˜ 21.0, and both the number of faint and bright objects (including sgzKs and pgzKs) exceed the predictions of a recent semi-analytic model of galaxy formation. A more successful model is needed to explain this diversity. It is also found that the star formation rate (SFR) and specific SFR (sSFR) of sgzKs increase with redshift at all masses, implying that star-forming galaxies were much more active on average in the past. Moreover, the sSFR of massive galaxies is lower at all redshifts, suggesting that the mass growth of low-mass galaxies is more attributed to the star formation while comparing with high-mass galaxies. From the HST WFC3/F160W imaging data, we find that gzKs not only have diffuse structures, but also have single-object morphologies, implying that there are morphological variety and different formation processes for these galaxies at z˜2. In addition, we also find ˜ 10% of 828 gzKs can be classified as AGNs. In Chapter 4, we present Spitzer/IRS spectra of a sample of 14 ULIRGs with 0.2 {mJy} 10^{11} M_{⊙} and 410 M_⊙\\cdot yr^{-1}< SFR <1022 M_⊙\\cdot yr^{-1}, respectively. Their rest-frame optical morphologies are very diversified including string-like, extended/diffused, and even early type spiral morphologies, implying that there are different formation processes for these galaxies. We also search for active galactic nucleus (AGN) signature in our sample using X-ray, radio, and mid-infrared (MIR) observations. EGS22, EGS25, EGS27, and EGS34 are detected in the X-ray imaging. The X-ray luminosities for EGS22 and EGS34 can be accounted for by their intensive star formation. EGS25 and EGS27 have higher L_{2-10 keV}, indicating that they harbor AGNs. About 14% to 29% of the sample show signatures of AGNs in X-ray, MIR or radio. Finally, the summary of the whole thesis and outlook are presented in Chapter 5.

Water Emission from Early Universe

NASA Astrophysics Data System (ADS)

Jarugula, Sreevani; Vieira, Joaquin

2017-06-01

The study of dusty star forming galaxies (DSFGs) is important to understand galaxy assembly in early universe. A bulk of star formation at z ˜ 2-3 takes place in DSFGs but are obscured by dust in optical/UV. However, they are extremely bright in far infrared (FIR) and submillimeter with infrared luminosities of 10^{11} - 10^{13} L_{⊙}. ALMA, with its high spatial and spectral resolution, has opened up a new window to study molecular lines, which are vital to our understanding of the excitation and physical processes in the galaxy. Carbon monoxide (CO) being the second most abundant and bright molecule after hydrogen (H_{2}), is an important tracer of star forming potential. Besides CO, water (H_{2}O) is also abundant and it's line strength is comparable to high-J CO lines in high redshift Ultra Luminous Infrared Galaxies (ULIRGs). Studies have shown H_{2}O to directly trace the FIR field and hence the star forming regions. Moreover, L_{H_{2}O}/L_{IR} ratio is nearly constant for five of the most important water lines and does not depend on the presence of AGN implying that H_{2}O is one of the best tracers of star forming regions (SFRs). This incredible correlation holds for nearly five orders of magnitude in luminosity and observed in both local and high redshift luminous infrared galaxies. In this talk, I will discuss the importance of H_{2}O in tracing FIR field and show the preliminary results of resolved water emission from three high-redshift gravitationally lensed South Pole Telescope (SPT) sources obtained from ALMA cycle 3 and cycle 4. These sources are among the first H_{2}O observations with resolved spatial scales ˜ 1 kpc and will prove to be important for ALMA and galaxy evolution studies.

Megamasers: Molecular Diagnostics of the Nuclear ISM

NASA Astrophysics Data System (ADS)

Baan, Willem A.; Klöckner, Hans-R.

Molecular emissions are powerful tracers of intense heating and star-formation processes in galactic nuclei. In this paper we consider the characteristics of molecular Megamaser emission among the population of (Ultra-) Luminous Infrared Galaxies that are powered by intense star-formation or accretion onto a massive compact object. In addition, we consider the systematic behavior of the line emission of high-density tracer molecules. An evolutionary scenario is presented for ULIRGs that may explain the molecular line ratios observed in the population of FIR galaxies.

Megamasers: Molecular Diagnostics of the Nuclear Ism

NASA Astrophysics Data System (ADS)

Baan, Willem A.; Klöckner, Hans-R.

2005-01-01

Molecular emissions are powerful tracers of intense heating and star-formation processes in galactic nuclei. In this paper we consider the characteristics of molecular Megamaser emission among the population of (Ultra-) Luminous Infrared Galaxies that are powered by intense star-formation or accretion onto a massive compact object. In addition, we consider the systematic behavior of the line emission of high-density tracer molecules. An evolutionary scenario is presented for ULIRGs that may explain the molecular line ratios observed in the population of FIR galaxies.

VizieR Online Data Catalog: GOALS sample PACS and SPIRE fluxes (Chu+, 2017)

NASA Astrophysics Data System (ADS)

Chu, J. K.; Sanders, D. B.; Larson, K. L.; Mazzarella, J. M.; Howell, J. H.; Diaz-Santos, T.; Xu, K. C.; Paladini, R.; Schulz, B.; Shupe, D.; Appleton, P.; Armus, L.; Billot, N.; Chan, B. H. P.; Evans, A. S.; Fadda, D.; Frayer, D. T.; Haan, S.; Ishida, C. M.; Iwasawa, K.; Kim, D.-C.; Lord, S.; Murphy, E.; Petric, A.; Privon, G. C.; Surace, J. A.; Treister, E.

2017-06-01

The IRAS RBGS contains 179 LIRGs (log(LIR/Lȯ)= 22 ultra-luminous infrared galaxies (ULIRGs: log(LIR/Lȯ)>=12.0); these 201 total objects comprise the GOALS sample (Armus et al. 2009), a statistically complete flux-limited sample of infrared-luminous galaxies in the local universe. This paper presents imaging and photometry for all 201 LIRGs and LIRG systems in the IRAS RBGS that were observed during our GOALS Herschel OT1 program. (4 data files).

The Formation of Galactic Bulges

NASA Astrophysics Data System (ADS)

Carollo, C. Marcella; Ferguson, Henry C.; Wyse, Rosemary F. G.

2000-03-01

Part I. Introduction: What are galactic bulges?; Part II. The Epoch of Bulge Formation: Origin of bulges; Deep sub-mm surveys: High-z ULIRGs and the formation of spheroids; Ages and metallicities for stars in the galactic bulge; Integrated stellar populations of bulges: First results; HST-NICMOS observations of galactic bulges: Ages and dust; Inside-out bulge formation and the origin of the Hubble sequence; Part III. The Timescales of Bulge Formation: Constraints on the bulge formation timescale from stellar populations; Bulge building with mergers and winds; Role of winds, starbursts, and activity in bulge formation; Dynamical timescales of bulge formation; Part IV. Physical Processes in Bulge Formation: the role of bars for secular bulge formation; Bars and boxy/peanut-shaped bulges: an observational point of view; Boxy- and peanut-shaped bulges; A new class of bulges; The role of secondary bars in bulge formation; Radial transport of molecular gas to the nuclei of spiral galaxies; Dynamical evolution of bulge shapes; Two-component stellar systems: Phase-space constraints; Central NGC 2146 - a firehose-type bending instability?; Bulge formation: the role of the multi-phase ISM; Global evolution of a self-gravitating multi-phase ISM in the central kpc region of galaxies; Part V. Bulge Phenomenology: Bulge-disk decomposition of spiral galaxies in the near-infrared; The triaxial bulge of NGC 1371; The bulge-disk orthogonal decoupling in galaxies: NGC 4698 and NGC 4672; The kinematics and the origin of the ionized gas in NGC 4036; Optically thin thermal plasma in the galactic bulge; X-ray properties of bulges; The host galaxies of radio-loud AGN; The centers of radio-loud early-type galaxies with HST; Central UV spikes in two galactic spheroids; Conference summary: where do we stand?

Understanding The Heating And Cooling Of Galaxies Over Cosmic Time With BLISS on SPICA

NASA Astrophysics Data System (ADS)

Armus, Lee; Helou, G.; Bradford, M.; Murphy, E.; Appleton, P.

2011-05-01

In order to gain a comprehensive picture of galaxy evolution, we need to accurately measure the growing population of stars and super-massive black holes in dark matter halos. The processes that regulate this evolution are invariably those that are the most difficult to simulate, namely gas heating and cooling, star formation, black hole fueling and feedback from supernovae and AGN. Measurements of the PAH features, atomic fine-structure and H2 lines in the mid-infrared with Spitzer have been used successfully to probe the dust properties, power sources and state of the ISM in normal, starburst and AGN host galaxies at 0 < z < 3. At high redshifts, these lines enter the far-infrared, which is also home to critical diagnostics of the neutral and ionized ISM, such as [OI], [OIII], [NII], and [CII]. Recent results from Herschel, CSO, IRAM and APEX suggest that there is an extremely large range in far-infrared line fluxes and physical conditions among the most luminous, high-z galaxies. However, to measure the rest-frame far-infrared cooling lines in galaxies that dominate the far-infrared background, along with the full suite of mid-infrared atomic and molecular gas and dust features in ULIRGs over a wide range in redshift, a broadband spectrometer capable of reaching the natural astrophysical background over the 30-400 micron range is required. The Background Limited Infrared Sub-millimeter Spectrometer (BLISS) on the Japanese-led SPICA mission, would deliver unmatched sensitivity to evolving, dusty galaxies over all epochs. Here we discuss the scientific rationale behind BLISS and the opportunities afforded by US participation in the SPICA mission.

Evolution of the dusty infrared luminosity function from z = 0 to z = 2.3 using observations from Spitzer

NASA Astrophysics Data System (ADS)

Magnelli, B.; Elbaz, D.; Chary, R. R.; Dickinson, M.; Le Borgne, D.; Frayer, D. T.; Willmer, C. N. A.

2011-04-01

Aims: We derive the evolution of the infrared luminosity function (LF) over the last 4/5ths of cosmic time using deep 24 and 70 μm imaging of the GOODS North and South fields. Methods: We use an extraction technique based on prior source positions at shorter wavelengths to build the 24 and 70 μm source catalogs. The majority (93%) of the sources have a spectroscopic (39%) or a photometric redshift (54%) and, in our redshift range of interest (i.e., 1.3 < z < 2.3) s20% of the sources have a spectroscopic redshift. To extend our study to lower 70 μm luminosities we perform a stacking analysis and we characterize the observed L24/(1 + z) vs. L70/(1 + z) correlation. Using spectral energy distribution (SED) templates which best fit this correlation, we derive the infrared luminosity of individual sources from their 24 and 70 μm luminosities. We then compute the infrared LF at zs1.55 ± 0.25 and zs2.05 ± 0.25. Results: We observe the break in the infrared LF up to zs2.3. The redshift evolution of the infrared LF from z = 1.3 to z = 2.3 is consistent with a luminosity evolution proportional to (1 + z)1.0 ± 0.9 combined with a density evolution proportional to (1 + z)-1.1 ± 1.5. At zs2, luminous infrared galaxies (LIRGs: 1011L⊙ < LIR < 1012 L⊙) are still the main contributors to the total comoving infrared luminosity density of the Universe. At zs2, LIRGs and ultra-luminous infrared galaxies (ULIRGs: 1012L⊙ < LIR) account for s49% and s17% respectively of the total comoving infrared luminosity density of the Universe. Combined with previous results using the same strategy for galaxies at z < 1.3 and assuming a constant conversion between the infrared luminosity and star-formation rate (SFR) of a galaxy, we study the evolution of the SFR density of the Universe from z = 0 to z = 2.3. We find that the SFR density of the Universe strongly increased with redshift from z = 0 to z = 1.3, but is nearly constant at higher redshift out to z = 2.3. As part of the online material accompanying this article, we present source catalogs at 24 μm and 70 μm for both the GOODS-North and -South fields. Appendices are only available in electronic form at http://www.aanda.orgFull Tables B1-B4 are only available in electronic form at CDS via anonymous ftp to cdsarc.u-strasbg.fr (130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/528/A35

The middle infrared properties of OH megamaser host galaxies

NASA Astrophysics Data System (ADS)

Zhang, J. S.; Wang, J. Z.; Di, G. X.; Zhu, Q. F.; Guo, Q.; Wang, J.

2014-10-01

We compiled all 119 OH maser galaxies (110 out of them are megamasers, i.e., LOH> 10 L⊙) published so far and cross-identified these OH masers with the Wide-Field Infrared Survey Explorer (WISE) catalog, to investigate the middle infrared (MIR) properties of OH maser galaxies. The WISE magnitude data at the 3.4, 4.6, 12 and 22 μm (W1 to W4) are collected for the OH maser sample and one control sample, which are non-detection sources. The color-color diagrams show that both OH megamaser (OHM) and non-OHM (ultra)luminous infrared galaxies ((U)LIRGs) are far away from the single blackbody model line and many of them can follow the path described by the power-law model. The active galaxy nuclei (AGN) fraction is about ~40% for both OHM and non-OHM (U)LIRGs, according to the AGN criteria W1 - W2 ≥ 0.8. Among the Arecibo survey sample, OHM sources tend to have a lower luminosity at short MIR wavelengths (e.g., 3.4 μm and 4.6 μm) than that of non-OHM sources, which should come from the low OHM fraction among the survey sample with large 3.4 μm and 4.6 μm luminosity. The OHM fraction tends to increase with cooler MIR colors (larger F22 μm/F3.4 μm). These may be good for sample selection when searching OH megamasers, such as excluding extreme luminous sources at short MIR wavelengths, choosing sources with cooler MIR colors. In the case of the power-law model, we derived the spectral indices for our samples. For the Arecibo survey sample, OHM (U)LIRGs tend to have larger spectral index α22-12 than non-OHM sources, which agrees with previous results. One significant correlation exists between the WISE infrared luminosity at 22μm and the color [W1]-[W4] for the Arecibo OHM hosts. These clues should provide suitable constraints on the sample selection for OH megamaser surveys by future advanced telescopes (e.g., FAST). In addition, the correlation of maser luminosity and the MIR luminosity of maser hosts tends to be non-significant, which may indirectly support the pumping of OHM emission that is dominated by the far infrared radiation, instead of the MIR radiation. Tables 4-7 are available in electronic form at http://www.aanda.org

Detections of CO Molecular Gas in 24 μm Bright ULIRGs at z ~ 2 in the Spitzer First Look Survey

NASA Astrophysics Data System (ADS)

Yan, Lin; Tacconi, L. J.; Fiolet, N.; Sajina, A.; Omont, A.; Lutz, D.; Zamojski, M.; Neri, R.; Cox, P.; Dasyra, K. M.

2010-05-01

We present CO observations of nine ultra-luminous infrared galaxies (ULIRGs) at z ~ 2 with f ν(24 μm) gsim 1 mJy, previously confirmed with the mid-IR spectra in the Spitzer First Look Survey. All targets are required to have accurate redshifts from Keck/GEMINI near-IR spectra. Using the Plateau de Bure millimeter-wave Interferometer at the Institute for Radioastronomy at Millimeter Wavelengths, we detect CO J(3-2) (seven objects) or J(2-1) (one object) line emission from eight sources with integrated intensities Ic ~ 5σ-9σ. The CO-detected sources have a variety of mid-IR spectra, including strong polycyclic aromatic hydrocarbon, deep silicate absorption, and power-law continuum, implying that these molecular gas-rich objects at z ~ 2 could be either starbursts or dust-obscured active galactic nuclei (AGNs). The measured line luminosity L'CO is (1.28-3.77) × 1010 K km/s pc2. The averaged molecular gas mass M_H_2 is 1.7 × 1010 M sun, assuming CO-to-H2 conversion factor of 0.8 M sun (K km/s pc2)-1. Three sources (33%)—MIPS506, MIPS16144, and MIPS8342—have double peak velocity profiles. The CO double peaks in MIPS506 and MIPS16144 show spatial separations of 45 kpc and 10.9 kpc, allowing the estimates of the dynamical masses of 3.2 × 1011 sin-2(i) M sun and 5.4 × 1011 sin-2(i) M sun, respectively. The implied gas fraction, M gas/M dyn, is 3% and 4%, assuming an average inclination angle. Finally, the analysis of the Hubble Space Telescope/NIC2 images, mid-IR spectra, and IR spectral energy distribution revealed that most of our sources are mergers, containing dust-obscured AGNs dominating the luminosities at (3-6) μm. Together, these results provide some evidence suggesting submillimeter galaxies, bright 24 μm, z ~ 2 ULIRGs, and QSOs could represent three different stages of a single evolutionary sequence, however, a complete physical model would require much more data, especially high spatial resolution spectroscopy. Based on observations obtained at the Institute for Radioastronomy at Millimeter Wavelengths (IRAM) Plateau de Bure Interferometer (PdBI). IRAM is funded by the Centre National de la Recherche Scientifique (France), the Max-Planck Gesellschaft (Germany), and the Instituto Geografico Nacional (Spain).

Spitzer Quasar and ULIRG Evolution Study (QUEST). II. The Spectral Energy Distributions of Palomar-Green Quasars

NASA Astrophysics Data System (ADS)

Netzer, Hagai; Lutz, Dieter; Schweitzer, Mario; Contursi, Alessandra; Sturm, Eckhard; Tacconi, Linda J.; Veilleux, Sylvain; Kim, D.-C.; Rupke, David; Baker, Andrew J.; Dasyra, Kalliopi; Mazzarella, Joseph; Lord, Steven

2007-09-01

This is the second paper studying the QSOs in the Spitzer QUEST sample. Previously we presented new PAH measurements and argued that most of the observed far-infrared (FIR) radiation is due to star-forming activity. Here we present spectral energy distributions (SEDs) by supplementing our data with optical, NIR, and FIR observations. We define two subgroups, of ``weak FIR'' and ``strong FIR'' QSOs, and a third group of FIR nondetections. Assuming a starburst origin for the FIR, we obtain ``intrinsic'' active galactic nucleus (AGN) SEDs by subtracting a starburst template from the mean SEDs. The resulting SEDs are remarkably similar for all groups. They show three distinct peaks corresponding to two silicate emission features and a 3 μm bump, which we interpret as the signature of the hottest AGN dust. They also display drops beyond ~20 μm that we interpret as the signature of the minimum temperature (~200 K) dust. This component must be optically thin to explain the silicate emission and the slope of the long-wavelength continuum. We discuss the merits of an alternative model in which most of the FIR emission is due to AGN heating. Such models are unlikely to explain the properties of our QSOs, but they cannot be ruled out for more luminous objects. We also find correlations between the luminosity at 5100 Å and two infrared starburst indicators: L(60 μm) and L(PAH 7.7 μm). The correlation of L(5100 Å) with L(60 μm) can be used to measure the relative growth rates and lifetimes of the black hole and the new stars.

Spatially Resolved Analysis of the Interstellar Medium in the Cosmic Eye, a Lensed Lyman Break Galaxy at z=3.074

NASA Astrophysics Data System (ADS)

Ball, Catherine; Riechers, Dominik A.; Pavesi, Riccardo

2018-01-01

The [CII]/[NII] ratio combines the [CII] line, a tracer of photodissociation and HII regions emerging from the neutral and ionized phases of the interstellar medium (ISM), with [NII] emission, which only originates from the ionized ISM. In this, the [CII]/[NII] ratio can be used to separate the fractions of [CII] emission emerging from the different phases of the ISM. We present Atacama Large sub-Millimeter Array (ALMA) observations of the Cosmic Eye, a gravitationally lensed Lyman Break Galaxy (LBG). As an LBG, the Cosmic Eye represents a "normal" star forming galaxy in the z>2 universe. LBGs were host to the bulk of star formation during the peak epoch of star formation. Diagnosing star formation in these galaxies provides insight into the evolution of “normal” galaxies in a cosmic sense. The high magnification (30x) allows us to resolve the [CII] 158μm and the [NII] 205μm lines in detail, allowing for a position-resolved analysis of their ratio. We find variations of the line ratio across the galaxy, suggesting the galaxy’s internal structure affects this ratio. We consider the Cosmic Eye in the context of both higher redshift LBGs and local luminous and ultraluminous infrared galaxies, finding that the Cosmic Eye’s line ratio is similar to those of both higher- and lower- redshift galaxies. The Cosmic Eye’s global [CII]/[NII] ratio sits between two previous measurements of z>5 LBGs at low resolution, suggesting that the ratio may correlate more significantly with LFIR than with redshift in this epoch. Furthermore, the Cosmic Eye’s [CII]/[NII] ratio is similar to those of the nearby LIRG/ULIRGs, though we expect local [CII]/[NII] values to be lower due to their different metallicities and dust content. High-resolution studies like this one probe the evolution of [CII]/[NII] over cosmic time by examining the evolution of the ISM’s structure. With a better understanding of the [CII]/[NII] line ratio, we can more effectively use it as a probe of the nature of star formation in high-redshift galaxies. CJB participated in the summer 2017 REU program in the Center for Astrophysics and Planetary Science at Cornell University under NSF award AST-1659264.

Hot DOGs: The Most Luminous Galaxies Found by WISE

NASA Astrophysics Data System (ADS)

Eisenhardt, Peter; Tsai, Chao-Wei; Wu, Jingwen; Griffith, Roger; Yan, Lin; Stern, Daniel; Stanford, Adam; Blain, Andrew; Benford, Dominic; Bridge, Carrie; Assef, Roberto; Petty, Sara

2013-02-01

NASA's Wide-field Infrared Survey Explorer (WISE) has achieved its fundamental goal by delivering its all-sky survey at 3.4, 4.6, 12 and 22 (micron) (W1, W2, W3, and W4), reaching sensitivities hundreds of times deeper than IRAS. One of the two primary science objectives for WISE is to identify the most luminous galaxies in the Universe (Ultra-Luminous IR Galaxies, or ULIRGs). We have used WISE photometry to select an all- sky sample of objects which are extremely luminous, and for which Herschel far-IR follow-up observations are underway. The objects are prominent in W3 and W4, but faint or undetected in W1 and W2. Available spectroscopy and far IR photometry for these objects show they typically have redshifts z > 2 and luminosities over 10^13 L_odot, with about 10% exceeding 10^14 L_odot and rivaling the brightest known QSOs. Their dust is more than twice as hot as other IR luminous objects: they are hot dust obscured galaxies or ``hot DOGs," and may represent a new phase in galaxy evolution. We request NOAO time to obtain redshifts and optical and near IR photometry for the all-sky sample of the brightest hot DOGs, all of which are in our Herschel program. With existing and allocated observations, this request should complete the acquisition of these crucial data for this primary WISE science objective.

A NuSTAR SURVEY OF NEARBY ULTRALUMINOUS INFRARED GALAXIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Teng, Stacy H.; Rigby, Jane R.; Ptak, Andrew

We present a Nuclear Spectroscopic Telescope Array (NuSTAR), Chandra, and XMM-Newton survey of nine of the nearest ultraluminous infrared galaxies (ULIRGs). The unprecedented sensitivity of NuSTAR at energies above 10 keV enables spectral modeling with far better precision than was previously possible. Six of the nine sources observed were detected sufficiently well by NuSTAR to model in detail their broadband X-ray spectra, and recover the levels of obscuration and intrinsic X-ray luminosities. Only one source (IRAS 13120–5453) has a spectrum consistent with a Compton-thick active galactic nucleus (AGN), but we cannot rule out that a second source (Arp 220) harborsmore » an extremely highly obscured AGN as well. Variability in column density (reduction by a factor of a few compared to older observations) is seen in IRAS 05189–2524 and Mrk 273, altering the classification of these borderline sources from Compton-thick to Compton-thin. The ULIRGs in our sample have surprisingly low observed fluxes in high-energy (>10 keV) X-rays, especially compared to their bolometric luminosities. They have lower ratios of unabsorbed 2–10 keV to bolometric luminosity, and unabsorbed 2–10 keV to mid-IR [O iv] line luminosity than do Seyfert 1 galaxies. We identify IRAS 08572+3915 as another candidate intrinsically X-ray weak source, similar to Mrk 231. We speculate that the X-ray weakness of IRAS 08572+3915 is related to its powerful outflow observed at other wavelengths.« less

Powerful Molecular Outflows in Nearby Active Galaxies

NASA Astrophysics Data System (ADS)

Veilleux, Sylvain; Meléndez, Marcio

2014-07-01

We report the results from a systematic search for molecular (OH 119 μm) outflows with Herschel-PACS† in a sample of 43 nearby (z < 0.3) galaxy mergers, mostly ultraluminous infrared galaxies (ULIRGs) and QSOs. We find that the character of the OH feature (strength of the absorption relative to the emission) correlates with that of the 9.7-μm silicate feature, a measure of obscuration in ULIRGs. Unambiguous evidence for molecular outflows, based on the detection of OH absorption profiles with median velocities more blueshifted than -50 km s-1, is seen in 26 (70%) of the 37 OH-detected targets, suggesting a wide-angle (~ 145°) outflow geometry. Conversely, unambiguous evidence for molecular inflows, based on the detection of OH absorption profiles with median velocities more redshifted than +50 km s-1, is seen in only 4 objects, suggesting a planar or filamentary geometry for the inflowing gas. Terminal outflow velocities of ~ -1000 km s-1 are measured in several objects, but median outflow velocities are typically ~ -200 km s-1. While the outflow velocities show no statistically significant dependence on the star formation rate, they are distinctly more blueshifted among systems with large AGN fractions and luminosities [log (L AGN/L ⊙) >= 11.8 +/- 0.3]. The quasars in these systems play a dominant role in driving the molecular outflows. In contrast, the most AGN dominated systems, where OH is seen purely in emission, show relatively modest OH line widths, despite their large AGN luminosities, perhaps indicating that molecular outflows subside once the quasar has cleared a path through the obscuring material.

The Dual Role of Starbursts and Active Galactic Nuclei in Driving Extreme Molecular Outflows

NASA Astrophysics Data System (ADS)

Gowardhan, Avani; Spoon, Henrik; Riechers, Dominik A.; González-Alfonso, Eduardo; Farrah, Duncan; Fischer, Jacqueline; Darling, Jeremy; Fergulio, Chiara; Afonso, Jose; Bizzocchi, Luca

2018-05-01

We report molecular gas observations of IRAS 20100‑4156 and IRAS 03158+4227, two local ultraluminous infrared galaxies (ULIRGs) hosting some of the fastest and most massive molecular outflows known. Using Atacama Large Millimeter Array and Plateau de Bure Interferometer observations, we spatially resolve the CO (1‑0) emission from the outflowing molecular gas in both and find maximum outflow velocities of v max ∼ 1600 and ∼1700 km s‑1 for IRAS 20100‑4156 and IRAS 03158+4227, respectively. We find total gas mass outflow rates of {\\dot{M}}OF}∼ 670 and ∼350 M ⊙ yr‑1, respectively, corresponding to molecular gas depletion timescales {τ }OF}dep}∼ 11 and ∼16 Myr. This is nearly 3 times shorter than the depletion timescales implied by star formation, {τ }SFR}dep}∼ 33 and ∼46 Myr, respectively. To determine the outflow driving mechanism, we compare the starburst luminosity (L *) and active galactic nucleus (AGN) luminosity (L AGN) to the outflowing energy and momentum fluxes, using mid-infrared spectral decomposition to discern L AGN. Comparison to other molecular outflows in ULIRGs reveals that outflow properties correlate similarly with L * and L IR as with L AGN, indicating that AGN luminosity alone may not be a good tracer of feedback strength and that a combination of AGN and starburst activity may be driving the most powerful molecular outflows. We also detect the OH 1.667 GHz maser line from both sources and demonstrate its utility in detecting molecular outflows.

Multiwavelength Characterization of an ACT-Selected, Lensed Dusty Star-Forming Galaxy at zeta 2.64

NASA Technical Reports Server (NTRS)

Roberts-Borsani, G. W.; Jimenez-Donaire, M. J.; Dapra, M.; Alatalo, K.; Aretxaga, I.; Alvarez-Marquez, J.; Baker, A. J.; Fujimoto, S.; Gallardo, P. A.; Gralla, M.;

Studying the kinematic asymmetries of disks and post-coalescence mergers using a new "kinemetry" criterion

NASA Astrophysics Data System (ADS)

Bellocchi, E.; Arribas, S.; Colina, L.

2012-06-01

Context. Ultra luminous and luminous infrared galaxies [(U)LIRGs] are important galaxy populations for studying galaxy evolution, and are likely to have been responsible for a significant fraction of the star formation that occurred prior to z ~ 1. Local (U)LIRGs can be used to study criteria that are suitable for characterizing similar high redshift populations. We are particularly interested in identifying reliable kinematic-based methods capable of distinguishing disks and mergers, as their relative fraction is a key observational input to constrain different evolutionary scenarios. Aims: Our goal is to analyze in detail the kinematics of the ionized gas of a small sample of LIRGs and study criteria that permit us to characterize the evolutionary status of these systems. Methods: We obtained Very Large Telescope VIMOS optical integral field spectroscopy (IFS) data of four LIRGs selected at similar distances (~70 Mpc) to avoid relative resolution effects. Two of these systems had been previously classified as regular isolated disks galaxies and the other two as post-coalescence mergers based on their morphology. The kinemetry method (developed by Krajnović and coworkers) is used to characterize the kinematic properties of these galaxies and discuss new criteria for distinguishing their status. Results: We present and discuss new kinematic maps (i.e., velocity field and velocity dispersion) for these four galaxies. These kinematic data suggest that nuclear outflows exist in all these galaxies, and are particularly intense for the post-coalescence merger systems. The vc/σc parameter has values between those that are typical of local spiral galaxies (i.e., vc/σc = 5-15) and those obtained for Lyman break analogs at z ~ 0.2 (i.e., vc/σc = 0.4-1.8). Our use of one-dimensional parameters, such as vc/σc or vshear/Σ, does not allow us to distinguish between the two groups (i.e., disks, post-coalescence systems). However, when the full two-dimensional kinematic information of the IFS data is analyzed by means of kinemetry, their morphological and kinematic classifications are consistent, with disks having lower kinematic asymmetries than post-coalescence mergers. We propose and discuss a new kinematic criterion to differentiate between these two groups. In particular, we introduce a weighting that favors the outer parts of the kinematic maps when computing the total asymmetries. This step is taken because post-coalescence mergers display relatively small kinematic asymmetries in their inner parts as a consequence of the rapid relaxation of gas into a rotating disk, whereas the outer parts continue to be out of equilibrium (i.e., to have larger asymmetries). We find that, in addition to distinguishing post-coalescence mergers from rotating disks, this new criterion has the advantage of being less sensitive to angular resolution effects. According to previous kinemetry-based analyses designed to distinguish disks and mergers at high-z, the present post-coalescence systems would have been classified as disks. This indicates that the separation of disks from mergers depends on the definition of a merger. It also suggests that previous estimates of the merger/disk ratio might have been underestimated, but larger samples are necessary to establish a firmer conclusion.

OT1_kcoppin_1: A Herschel Survey of [OI]63um in 1

NASA Astrophysics Data System (ADS)

Coppin, K.

2010-07-01

Luminous obscured galaxies likely dominate the total bolometric emission from star-formation at the early epochs of z~2-3, and are most efficiently identified through their (sub)millimetre emission and are so-called submillimetre galaxies (SMGs). The intense starbursts in SMGs are fuelled by their large observed H2 gas reservoirs, as traced by CO interferometric surveys, although the details of how their immense luminosities (L_fir>5x10^12 Lsun) and star-formation rates (~100-1000 Msun/yr) are powered are not well understood: Are SMGs just scaled up ULIRGs with star-formation occurring in a highly-obscured nuclear region (with perhaps some contribution from an AGN)? Or does the star-formation occur in a more extended, cooler component, such as in "normal" star-forming galaxies. One route to tackling this question is to construct a data set of the brightest fine-structure ISM emission lines ([CII] and [OI]) in a well-defined sample of SMGs, which with ancillary CO data, will allow us to study the physics of the ISM and its interplay with the heating source. Similar benchmark data sets are being compiled by several Herschel programs for local LIRGs and ULIRGs, which will act as a link to help interpret the high-redshift SMG observations. Here we propose a timely and systematic study with the PACS spectrometer of [OI]63um in a flux-limited sample of SMGs with secure spectroscopic redshifts between 0.7

The Second-generation z (Redshift) and Early Universe Spectrometer. I. First-light Observation of a Highly Lensed Local-ulirg Analog at High-z

NASA Astrophysics Data System (ADS)

Ferkinhoff, Carl; Brisbin, Drew; Parshley, Stephen; Nikola, Thomas; Stacey, Gordon J.; Schoenwald, Justin; Higdon, James L.; Higdon, Sarah J. U.; Verma, Aprajita; Riechers, Dominik; Hailey-Dunsheath, Steven; Menten, Karl M.; Güsten, Rolf; Weiß, Axel; Irwin, Kent; Cho, Hsiao M.; Niemack, Michael; Halpern, Mark; Amiri, Mandana; Hasselfield, Matthew; Wiebe, D. V.; Ade, Peter A. R.; Tucker, Carol E.

2014-01-01

We recently commissioned our new spectrometer, the second-generation z(Redshift) and Early Universe Spectrometer (ZEUS-2) on the Atacama Pathfinder Experiment telescope. ZEUS-2 is a submillimeter grating spectrometer optimized for detecting the faint and broad lines from distant galaxies that are redshifted into the telluric windows from 200 to 850 μm. It uses a focal plane array of transition-edge sensed bolometers, the first use of these arrays for astrophysical spectroscopy. ZEUS-2 promises to be an important tool for studying galaxies in the years to come because of its synergy with Atacama Large Millimeter Array and its capabilities in the short submillimeter windows that are unique in the post-Herschel era. Here, we report on our first detection of the [C II] 158 μm line with ZEUS-2. We detect the line at z ~ 1.8 from H-ATLAS J091043.1-000322 with a line flux of (6.44 ± 0.42) × 10-18 W m-2. Combined with its far-IR luminosity and a new Herschel-PACS detection of the [O I] 63 μm line, we model the line emission as coming from a photo-dissociation region with far-ultraviolet radiation field, G ~ 2 × 104 G 0, gas density, n ~ 1 × 103 cm-3 and size between ~0.4 and 1 kpc. On the basis of this model, we conclude that H-ATLAS J091043.1-000322 is a high-redshift analog of a local ultra-luminous IR galaxy; i.e., it is likely the site of a compact starburst caused by a major merger. Further identification of these merging systems is important for constraining galaxy formation and evolution models.

Galactic star formation rates gauged by stellar end-products

NASA Astrophysics Data System (ADS)

Persic, M.; Rephaeli, Y.

2007-02-01

Young galactic X-ray point sources (XPs) closely trace the ongoing star formation in galaxies. From measured XP number counts we extract the collective 2-10 keV luminosity of young XPs, L_x^yXP, which we use to gauge the current star formation rate (SFR) in galaxies. We find that, for a sample of local star-forming galaxies (i.e., normal spirals and mild starbursts), L_x^yXP correlates linearly with the SFR over three decades in luminosity. A separate, high-SFR sample of starburst ULIRGs can be used to check the calibration of the relation. Using their (presumably SF-related) total 2-10 keV luminosities we find that these sources satisfy the SFR-L_x^yXP relation, as defined by the weaker sample, and extend it to span ˜5 decades in luminosity. The SFR-L_x^yXP relation is also likely to hold for distant (z ˜ 1) Hubble Deep Field North galaxies, especially so if these high-SFR objects are similar to the (more nearby) ULIRGs. It is argued that the SFR-L_x^yXP relation provides the most adequate X-ray estimator of instantaneous SFR by the phenomena characterizing massive stars from their birth (FIR emission from placental dust clouds) through their death as compact remnants (emitting X-rays by accreting from a close donor). For local, low/intermediate-SFR galaxies, the simultaneous existence of a correlation of the instantaneous SFR with the total 2-10 keV luminosity, L_x, which traces the SFR integrated over the last ˜109 yr, suggests that during such epoch the SF in these galaxies has been proceeding at a relatively constant rate.

Testing a double AGN hypothesis for Mrk 273

NASA Astrophysics Data System (ADS)

Iwasawa, K.; U, V.; Mazzarella, J. M.; Medling, A. M.; Sanders, D. B.; Evans, A. S.

2018-04-01

The ultra-luminous infrared galaxy (ULIRG) Mrk 273 contains two infrared nuclei, N and SW, separated by 1 arcsecond. A Chandra observation has identified the SW nucleus as an absorbed X-ray source with NH 4 × 1023 cm-2 but also hinted at the possible presence of a Compton-thick AGN in the N nucleus, where a black hole of 109 M⊙ is inferred from the ionized gas kinematics. The intrinsic X-ray spectral slope recently measured by NuSTAR is unusually hard (Γ 1.3) for a Seyfert nucleus, for which we seek an alternative explanation. We hypothesize a strongly absorbed X-ray source in N, of which X-ray emission rises steeply above 10 keV, in addition to the known X-ray source in SW, and test it against the NuSTAR data, assuming the standard spectral slope (Γ = 1.9). This double X-ray source model gives a good explanation of the hard continuum spectrum, deep Fe K absorption edge, and strong Fe K line observed in this ULIRG, without invoking the unusual spectral slope required for a single source interpretation. The putative X-ray source in N is found to be absorbed by NH = 1.4+0.7-0.4 × 1024 cm-2. The estimated 2-10 keV luminosity of the N source is 1.3 × 1043 erg s-1, about a factor of 2 larger than that of SW during the NuSTAR observation. Uncorrelated variability above and below 10 keV between the Suzaku and NuSTAR observations appears to support the double source interpretation. Variability in spectral hardness and Fe K line flux between the previous X-ray observations is also consistent with this picture.

Fast Molecular Outflows in Luminous Galaxy Mergers: Evidence for Quasar Feedback from Herschel

NASA Technical Reports Server (NTRS)

Veilleux, S.; Melendez, M.; Sturm, E.; Garcia-Carpio, J.; Fischer, J.; Gonzalez-Alfonso, E.; Contursi, A.; Lutz, D.; Poglitsch, A.; Davies, R.;

Fast Molecular Outflows in Luminous Galaxy Mergers: Evidence for Quasar Feedback from Herschel

NASA Astrophysics Data System (ADS)

Veilleux, S.; Meléndez, M.; Sturm, E.; Gracia-Carpio, J.; Fischer, J.; González-Alfonso, E.; Contursi, A.; Lutz, D.; Poglitsch, A.; Davies, R.; Genzel, R.; Tacconi, L.; de Jong, J. A.; Sternberg, A.; Netzer, H.; Hailey-Dunsheath, S.; Verma, A.; Rupke, D. S. N.; Maiolino, R.; Teng, S. H.; Polisensky, E.

2013-10-01

We report the results from a systematic search for molecular (OH 119 μm) outflows with Herschel/PACS in a sample of 43 nearby (z < 0.3) galaxy mergers, mostly ultraluminous infrared galaxies (ULIRGs) and QSOs. We find that the character of the OH feature (strength of the absorption relative to the emission) correlates with that of the 9.7 μm silicate feature, a measure of obscuration in ULIRGs. Unambiguous evidence for molecular outflows, based on the detection of OH absorption profiles with median velocities more blueshifted than -50 km s-1, is seen in 26 (70%) of the 37 OH-detected targets, suggesting a wide-angle (~145°) outflow geometry. Conversely, unambiguous evidence for molecular inflows, based on the detection of OH absorption profiles with median velocities more redshifted than +50 km s-1, is seen in only four objects, suggesting a planar or filamentary geometry for the inflowing gas. Terminal outflow velocities of ~-1000 km s-1 are measured in several objects, but median outflow velocities are typically ~-200 km s-1. While the outflow velocities show no statistically significant dependence on the star formation rate, they are distinctly more blueshifted among systems with large active galactic nucleus (AGN) fractions and luminosities [log (L AGN/L ⊙) >= 11.8 ± 0.3]. The quasars in these systems play a dominant role in driving the molecular outflows. However, the most AGN dominated systems, where OH is seen purely in emission, show relatively modest OH line widths, despite their large AGN luminosities, perhaps indicating that molecular outflows subside once the quasar has cleared a path through the obscuring material.

Nustar Reveals an Intrinsically X-ray Weak Broad Absorption Line Quasar in the Ultraluminous Infrared Galaxy Markarian 231

NASA Technical Reports Server (NTRS)

Teng, Stacy H.; Brandt. W. N.; Harrison, F. A.; Luo, B.; Alexander, D. M.; Bauer, F. E.; Boggs, S. E.; Christensen, F. E.; Comastri, A.; Craig, W. W.;

No Sign of Strong Molecular Gas Outflow in an Infrared-bright Dust-obscured Galaxy with Strong Ionized-gas Outflow

NASA Astrophysics Data System (ADS)

Toba, Yoshiki; Komugi, Shinya; Nagao, Tohru; Yamashita, Takuji; Wang, Wei-Hao; Imanishi, Masatoshi; Sun, Ai-Lei

2017-12-01

We report the discovery of an infrared (IR)-bright dust-obscured galaxy (DOG) that shows a strong ionized-gas outflow but no significant molecular gas outflow. Based on detailed analysis of their optical spectra, we found some peculiar IR-bright DOGs that show strong ionized-gas outflow ([O III] λ5007) from the central active galactic nucleus (AGN). For one of these DOGs (WISE J102905.90+050132.4) at z spec = 0.493, we performed follow-up observations using ALMA to investigate their CO molecular gas properties. As a result, we successfully detected 12CO(J = 2–1) and 12CO(J = 4–3) lines and the continuum of this DOG. The intensity-weighted velocity map of both lines shows a gradient, and the line profile of those CO lines is well-fitted by a single narrow Gaussian, meaning that this DOG has no sign of strong molecular gas outflow. The IR luminosity of this object is log (L IR/L ⊙) = 12.40, which is classified as an ultraluminous IR galaxy (ULIRG). We found that (i) the stellar mass and star formation rate relation and (ii) the CO luminosity and far-IR luminosity relation are consistent with those of typical ULIRGs at similar redshifts. These results indicate that the molecular gas properties of this DOG are normal despite the fact that its optical spectrum shows a powerful AGN outflow. We conclude that a powerful ionized-gas outflow caused by the AGN does not necessarily affect the cold interstellar medium in the host galaxy, at least for this DOG.

A Multiwavelength Study of a Sample of 70 μm Selected Galaxies in the COSMOS Field. I. Spectral Energy Distributions and Luminosities

NASA Astrophysics Data System (ADS)

Kartaltepe, Jeyhan S.; Sanders, D. B.; Le Floc'h, E.; Frayer, D. T.; Aussel, H.; Arnouts, S.; Ilbert, O.; Salvato, M.; Scoville, N. Z.; Surace, J.; Yan, L.; Brusa, M.; Capak, P.; Caputi, K.; Carollo, C. M.; Civano, F.; Elvis, M.; Faure, C.; Hasinger, G.; Koekemoer, A. M.; Lee, N.; Lilly, S.; Liu, C. T.; McCracken, H. J.; Schinnerer, E.; Smolčić, V.; Taniguchi, Y.; Thompson, D. J.; Trump, J.

2010-02-01

We present a large robust sample of 1503 reliable and unconfused 70 μm selected sources from the multiwavelength data set of the Cosmic Evolution Survey. Using the Spitzer IRAC and MIPS photometry, we estimate the total infrared (IR) luminosity, L IR (8-1000 μm), by finding the best-fit template from several different template libraries. The long-wavelength 70 and 160 μm data allow us to obtain a reliable estimate of L IR, accurate to within 0.2 and 0.05 dex, respectively. The 70 μm data point enables a significant improvement over the luminosity estimates possible with only a 24 μm detection. The full sample spans a wide range in IR luminosity, L IR ≈ 108-1014 L sun, with a median luminosity of 1011.4 L sun. We identify a total of 687 luminous, 303 ultraluminous, and 31 hyperluminous infrared galaxies (LIRGs, ULIRGs, and HyLIRGs) over the redshift range 0.01 < z < 3.5 with a median redshift of 0.5. Presented here are the full spectral energy distributions (SEDs) for each of the sources compiled from the extensive multiwavelength data set from the ultraviolet (UV) to the far-infrared. A catalog of the general properties of the sample (including the photometry, redshifts, and L IR) is included with this paper. We find that the overall shape of the SED and trends with L IR (e.g., IR color temperatures and optical-IR ratios) are similar to what has been seen in studies of local objects; however, our large sample allows us to see the extreme spread in UV to near-infrared colors spanning nearly 3 orders of magnitude. In addition, using SED fits we find possible evidence for a subset of cooler ultraluminous objects than observed locally. However, until direct observations at longer wavelengths are obtained, the peak of emission and the dust temperature cannot be well constrained. We use these SEDs, along with the deep radio and X-ray coverage of the field, to identify a large sample of candidate active galactic nuclei (AGNs). We find that the fraction of AGNs increases strongly with L IR, as it does in the local universe, and that nearly 70% of ULIRGs and all HyLIRGs likely host a powerful AGN. Based on observations with the NASA/ESA Hubble Space Telescope, obtained at the Space Telescope Science Institute, which is operated by AURA Inc., under NASA contract NAS 5-26555; also based on data collected at: the Subaru Telescope, which is operated by the National Astronomical Observatory of Japan; the XMM-Newton, an ESA science mission with instruments and contributions directly funded by ESA Member States and NASA; the European Southern Observatory under Large Program 175.A-0839, Chile; the National Radio Astronomy Observatory which is a facility of the National Science Foundation operated under cooperative agreement by Associated Universities, Inc.; and the Canada-France-Hawaii Telescope with MegaPrime/MegaCam operated as a joint project by the CFHT Corporation, CEA/DAPNIA, the National Research Council of Canada, the Canadian Astronomy Data Centre, the Centre National de la Recherche Scientifique de France, TERAPIX, and the University of Hawaii.

HUBBLE PROVIDES 'ONE-TWO PUNCH' TO SEE BIRTH OF STARS IN GALACTIC WRECKAGE

NASA Technical Reports Server (NTRS)

2002-01-01

Two powerful cameras aboard NASA's Hubble Space Telescope teamed up to capture the final stages in the grand assembly of galaxies. The photograph, taken by the Advanced Camera for Surveys (ACS) and the revived Near Infrared Camera and Multi-Object Spectrometer (NICMOS), shows a tumultuous collision between four galaxies located 1 billion light-years from Earth. The galactic car wreck is creating a torrent of new stars. The tangled up galaxies, called IRAS 19297-0406, are crammed together in the center of the picture. IRAS 19297-0406 is part of a class of galaxies known as ultraluminous infrared galaxies (ULIRGs). ULIRGs are considered the progenitors of massive elliptical galaxies. ULIRGs glow fiercely in infrared light, appearing 100 times brighter than our Milky Way Galaxy. The large amount of dust in these galaxies produces the brilliant infrared glow. The dust is generated by a firestorm of star birth triggered by the collisions. IRAS 19297-0406 is producing about 200 new Sun-like stars every year -- about 100 times more stars than our Milky Way creates. The hotbed of this star formation is the central region [the yellow objects]. This area is swamped in the dust created by the flurry of star formation. The bright blue material surrounding the central region corresponds to the ultraviolet glow of new stars. The ultraviolet light is not obscured by dust. Astronomers believe that this area is creating fewer new stars and therefore not as much dust. The colliding system [yellow and blue regions] has a diameter of about 30,000 light-years, or about half the size of the Milky Way. The tail [faint blue material at left] extends out for another 20,000 light-years. Astronomers used both cameras to witness the flocks of new stars that are forming from the galactic wreckage. NICMOS penetrated the dusty veil that masks the intense star birth in the central region. ACS captured the visible starlight of the colliding system's blue outer region. IRAS 19297-0406 may be similar to the so-called Hickson compact groups -- clusters of at least four galaxies in a tight configuration that are isolated from other galaxies. The galaxies are so close together that they lose energy from the relentless pull of gravity. Eventually, they fall into each other and form one massive galaxy. This color-composite image was made by combining photographs taken in near-infrared light with NICMOS and ultraviolet and visible light with ACS. The pictures were taken with these filters: the H-band and J-band on NICMOS; the V-band on the ACS wide-field camera; and the U-band on the ACS high-resolution camera. The images were taken on May 13 and 14. Credits: NASA, the NICMOS Group (STScI, ESA), and the NICMOS Science Team (University of Arizona)

X-Ray properties of Post-Merger Spheroidal Galaxies: The Missing Link in Understanding the Merger-AGN connection

NASA Astrophysics Data System (ADS)

Nair, Preethi

2017-09-01

We propose to characterize the AGN properties of post-merger spheroidal galaxies, a well-defined, significant post starburst phase in merging galaxies. These galaxies probe the "coalesced" late stage of mergers lying between ULIRGs and quenched elliptical galaxies. They are characterized by shells and tidal tails with lifetimes (0.5 - 1 Gyr) similar to those of low luminosity AGN. The AGN detection fraction for 12 serendipitous Chandra sources is 83%. These `shell' galaxies may represent a key time step in major mergers which has previously been unexplored. We propose to image a well selected sample of 12 shells drawn from SDSS to investigate this missing chapter in mergers.

The AT-LESS CO(1-0) survey of submillimetre galaxies in the Extended Chandra Deep Field South: First results on cold molecular gas in galaxies at z ˜ 2

NASA Astrophysics Data System (ADS)

Huynh, Minh T.; Emonts, B. H. C.; Kimball, A. E.; Seymour, N.; Smail, Ian; Swinbank, A. M.; Brandt, W. N.; Casey, C. M.; Chapman, S. C.; Dannerbauer, H.; Hodge, J. A.; Ivison, R. J.; Schinnerer, E.; Thomson, A. P.; van der Werf, P.; Wardlow, J. L.

2017-05-01

We present the first results from our ongoing Australia Telescope Compact Array survey of 12CO(1-0) in Atacama Large Millimeter Array (ALMA)-identified submillimetre galaxies (SMGs) in the Extended Chandra Deep Field South. Strong detections of 12CO(1-0) emission from two SMGs, ALESS 122.1 (z = 2.0232) and ALESS 67.1 (z = 2.1230), were obtained. We estimate gas masses of Mgas ˜ 1.3 × 1011 M⊙ and Mgas ˜ 1.0 × 1011 M⊙ for ALESS 122.1 and ALESS 67.1, respectively, adopting αCO = 1.0. Dynamical mass estimates from the kinematics of the 12CO(1-0) line yields Mdyn sin2 I = (2.1 ± 1.1) × 1011 M⊙ and (3.2 ± 0.9) × 1011 M⊙ for ALESS 122.1 and ALESS 67.1, respectively. This is consistent with the total baryonic mass estimates of these two systems. We examine star formation efficiency, using the LFIR versus L^' }_{CO(1-0)} relation for samples of local ultraluminous infrared galaxies (ULIRGs) and Luminous Infrared Galaxies (LIRGs), and more distant star-forming galaxies, with 12CO(1-0) detections. We find some evidence of a shallower slope for ULIRGs and SMGs compared to less luminous systems, but a larger sample is required for definite conclusions. We determine gas-to-dust ratios of 170 ± 30 and 140 ± 30 for ALESS 122.1 and ALESS 67.1, respectively, showing that ALESS 122.1 has an unusually large gas reservoir. By combining the 38.1 GHz continuum detection of ALESS 122.1 with 1.4 and 5.5 GHz data, we estimate that the free-free contribution to radio emission at 38.1 GHz is 34 ± 17 μJy, yielding a star formation rate (1400 ± 700 M⊙ yr-1) consistent with that from the infrared luminosity.

The physics of galactic winds driven by active galactic nuclei

NASA Astrophysics Data System (ADS)

Faucher-Giguère, Claude-André; Quataert, Eliot

2012-09-01

Active galactic nuclei (AGN) drive fast winds in the interstellar medium of their host galaxies. It is commonly assumed that the high ambient densities and intense radiation fields in galactic nuclei imply short cooling times, thus making the outflows momentum conserving. We show that cooling of high-velocity shocked winds in AGN is in fact inefficient in a wide range of circumstances, including conditions relevant to ultraluminous infrared galaxies (ULIRGs), resulting in energy-conserving outflows. We further show that fast energy-conserving outflows can tolerate a large amount of mixing with cooler gas before radiative losses become important. For winds with initial velocity vin ≳ 10 000 km s-1, as observed in ultraviolet and X-ray absorption, the shocked wind develops a two-temperature structure. While most of the thermal pressure support is provided by the protons, the cooling processes operate directly only on the electrons. This significantly slows down inverse Compton cooling, while free-free cooling is negligible. Slower winds with vin ˜ 1000 km s-1, such as may be driven by radiation pressure on dust, can also experience energy-conserving phases but under more restrictive conditions. During the energy-conserving phase, the momentum flux of an outflow is boosted by a factor ˜vin/2vs by work done by the hot post-shock gas, where vs is the velocity of the swept-up material. Energy-conserving outflows driven by fast AGN winds (vin ˜ 0.1c) may therefore explain the momentum fluxes Ṗ≫LAGN/c of galaxy-scale outflows recently measured in luminous quasars and ULIRGs. Shocked wind bubbles expanding normal to galactic discs may also explain the large-scale bipolar structures observed in some systems, including around the Galactic Centre, and can produce significant radio, X-ray and γ-ray emission. The analytic solutions presented here will inform implementations of AGN feedback in numerical simulations, which typically do not include all the important physics.

The Starburst-AGN connection: quenching the fire and feeding the monster

NASA Astrophysics Data System (ADS)

Melnick, Jorge; Telles, Eduardo; De Propris, Roberto; Chu, Zhang-Hu

2015-10-01

The merger of two spiral galaxies is believed to be one of the main channels for the production of elliptical and early-type galaxies. In the process, the system becomes an (ultra) luminous infrared galaxy, or (U)LIRG, that morphs to a quasar, to a K+A galaxy, and finally to an early-type galaxy. The time scales for this metamorphosis are only loosely constrained by observations. In particular, the K+A phase should follow immediately after the quasi stellar object (QSO) phase during which the dust and gas remaining from the (U)LIRG phase are expelled by the active galactic nucleus (AGN). An intermediate class of QSOs with K+A spectral signatures, the post-starburst QSOs (PSQ), may represent the transitional phase between QSOs and K+As. We have compiled a sample of 72 bona fide z < 0.5 PSQ from the SDSS DR7 QSO catalogue. We find the intermediate age populations in this sample to be on average significantly weaker and metal poorer than their putative descendants, the K+A galaxies. The typical spectral energy distribution of PSQ is well fitted by three components: starlight; an obscured power-law; and a hot dust component required to reproduce the mid-IR fluxes. From the slope and bolometric luminosity of the power-law component we estimate typical masses and accretion rates of the AGN, but we find little evidence of powerful radio-loud or strong X-ray emitters in our sample. This may indicate that the power-law component originates in a nuclear starburst rather than in an AGN, as expected if the bulk of their young stars are still being formed, or that the AGN is still heavily enshrouded in dust and gas. We find that both alternatives are problematic and that more and better optical, X-ray, and mm-wave observations are needed to elucidate the evolutionary history of PSQ.

A 33 GHz Survey of Local Major Mergers: Estimating the Sizes of the Energetically Dominant Regions from High-resolution Measurements of the Radio Continuum

NASA Astrophysics Data System (ADS)

Barcos-Muñoz, L.; Leroy, A. K.; Evans, A. S.; Condon, J.; Privon, G. C.; Thompson, T. A.; Armus, L.; Díaz-Santos, T.; Mazzarella, J. M.; Meier, D. S.; Momjian, E.; Murphy, E. J.; Ott, J.; Sanders, D. B.; Schinnerer, E.; Stierwalt, S.; Surace, J. A.; Walter, F.

2017-07-01

We present Very Large Array observations of the 33 GHz radio continuum emission from 22 local ultraluminous and luminous infrared (IR) galaxies (U/LIRGs). These observations have spatial (angular) resolutions of 30-720 pc (0.″07-0.″67) in a part of the spectrum that is likely to be optically thin. This allows us to estimate the size of the energetically dominant regions. We find half-light radii from 30 pc to 1.7 kpc. The 33 GHz flux density correlates well with the IR emission, and we take these sizes as indicative of the size of the region that produces most of the energy. Combining our 33 GHz sizes with unresolved measurements, we estimate the IR luminosity and star formation rate per area and the molecular gas surface and volume densities. These quantities span a wide range (4 dex) and include some of the highest values measured for any galaxy (e.g., {{{Σ }}}{SFR}33 {GHz}≤slant {10}4.1 {M}⊙ {{yr}}-1 {{kpc}}-2). At least 13 sources appear Compton thick ({N}{{H}}33 {GHz}≥slant {10}24 {{cm}}-2). Consistent with previous work, contrasting these data with observations of normal disk galaxies suggests a nonlinear and likely multivalued relation between star formation rate and molecular gas surface density, though this result depends on the adopted CO-to-H2 conversion factor and the assumption that our 33 GHz sizes apply to the gas. Eleven sources appear to exceed the luminosity surface density predicted for starbursts supported by radiation pressure and supernova feedback; however, we note the need for more detailed observations of the inner disk structure. U/LIRGs with higher surface brightness exhibit stronger [C II] 158 μm deficits, consistent with the suggestion that high energy densities drive this phenomenon.

Shutting down or powering up a (U)LIRG? Merger components in distinctly different evolutionary states in IRAS 19115-2124 (the Bird)

NASA Astrophysics Data System (ADS)

Väisänen, Petri; Reunanen, Juha; Kotilainen, Jari; Mattila, Seppo; Johansson, Peter H.; Ramphul, Rajin; Romero-Cañizales, Cristina; Kuncarayakti, Hanindyo

2017-10-01

We present new SINFONI near-infrared (NIR) integral field unit (IFU) spectroscopy and Southern African Large Telescope (SALT) optical long-slit spectroscopy characterizing the history of a nearby merging luminous infrared galaxy, dubbed the Bird (IRAS19115-2124). The NIR line-ratio maps of the IFU data cubes and stellar population fitting of the SALT spectra now allow dating of the star formation (SF) over the triple system uncovered from our previous adaptive optics data. The distinct components separate clearly in line-ratio diagnostic diagrams, both thermal and non-thermal excitation is present. An off-nuclear starburst dominates the current SF of the Bird with 60-70 per cent of the total, with a 4-7 Myr age. The most massive nucleus, in contrast, is quenched with a starburst age of >40 Myr and shows hints of budding active galactic nucleus (AGN) activity. The secondary massive nucleus is at an intermediate stage. The two major components have signs of an older stellar population, consistent with a starburst triggered 1 Gyr ago in a first encounter. The simplest explanation of the history is that of a triple merger, where the strongly star-forming component has joined later. We detect multiple gas flows. The Bird offers an opportunity to witness multiple stages of galaxy evolution in the same system; triggering as well as very recent quenching of SF, and, perhaps, an early appearance of AGN activity. It also serves as a cautionary note on interpretations of observations with lower spatial resolution and/or without infrared data. At high redshift the system would look like a clumpy starburst with crucial pieces of its puzzle hidden in danger of misinterpretations.

Search and Studies of Active Galaxies Using Multiwavelength Data

NASA Astrophysics Data System (ADS)

Mickaelian, A. M.; Gyulzadyan, M. V.; Abrahamyan, H. V.; Paronyan, G. M.; Mikayelyan, G. A.

2017-07-01

The Byurakan Astrophysical Observatory (BAO) during its history has always been one of the centres for surveys and studies of active galaxies. Here we review our search and studies of active galaxies during last 30 years using various wavelength ranges, as well as some recent related works. These projects since late 1980s were focused on multiwavelength search and studies of AGN and Starbursts. 1103 blue stellar objects (BSOs) on the basis of their UV-excess were selected using Markarian Survey (First Byurakan Survey, FBS) plates and Markarian's criteria used for the galaxies. 1577 IRAS point sources were optically identified using FBS low-dispersion spectra and many AGN, SB and high-luminosity IR galaxies (LIRG/ULIRG) were discovered. 2791 ROSAT FSC sources were optically identified using Hamburg Quasar Survey (HQS) low-dispersion spectra and many AGN were discovered by follow-up observations. Fine analysis of emission line spectra was carried out using spectral line decomposition software to establish true profiles and calculate physical parameters for the emitting regions. Multiwavelength approach allowed revealing many new AGN and SB and obtaining a number of interesting relations using their observational characteristics and physical properties.

The Extreme Star Formation Activity of Arp 299 Revealed by Spitzer IRS Spectral Mapping

NASA Astrophysics Data System (ADS)

Alonso-Herrero, Almudena; Rieke, George H.; Colina, Luis; Pereira-Santaella, Miguel; García-Marín, Macarena; Smith, J.-D. T.; Brandl, Bernhard; Charmandaris, Vassilis; Armus, Lee

2009-05-01

We present Spitzer/IRS spectral mapping observations of the luminous infrared galaxy Arp 299 (IC 694 + NGC 3690) covering the central ~45'' ~ 9 kpc. The integrated mid-IR spectrum of Arp 299 is similar to that of local starbursts despite its strongly interacting nature and high-IR luminosity, L IR ~ 6 × 1011 L sun. This is explained because the star formation (probed by, e.g., high [Ne III]15.56 μm/[Ne II]12.81 μm line ratios) is spread across at least 6-8 kpc. Moreover, a large fraction of this star formation is taking place in young regions of moderate mid-IR optical depths such as the C+C' complex in the overlap region between the two galaxies and in H II regions in the disks of the galaxies. It is only source A, the nuclear region of IC 694, which shows the typical mid-IR characteristics of ultraluminous infrared galaxies (ULIRGs; L IR > 1012 L sun), that is, very compact (less than 1 kpc) and dust-enshrouded star formation resulting in a deep silicate feature and moderate equivalent widths of the polycyclic aromatic hydrocarbons. The nuclear region of NGC 3690, known as source B1, hosts a low-luminosity active galactic nucleus (AGN) and is surrounded by regions of star formation. Although the high-excitation [Ne V]14.32 μm line typical of AGN is not detected in B1, its upper limit is consistent with the value expected from the X-ray luminosity. The AGN emission is detected in the form of a strong hot-dust component that accounts for 80%-90% of the 6 μm luminosity of B1. The similarity between the Arp 299 integrated mid-IR spectrum and those of high-z ULIRGs suggests that Arp 299 may represent a local example, albeit with lower IR luminosity and possibly higher metallicity, of the star formation processes occurring at high-z. Based on observations obtained with the Spitzer Space Telescope, which is operated by the Jet Propulsion Laboratory, California Institute of Technology, under NASA contract 1407.

Lighting the dark molecular gas and a Bok globule

NASA Astrophysics Data System (ADS)

Togi, Aditya G.

Stars are the building blocks of galaxies. The gas present in galaxies is the primary fuel for star formation. Galaxy evolution depends on the amount of gas present in the interstellar medium (ISM). Stars are born mainly from molecular gas in the GMCs. Robust knowledge of the molecular hydrogen H2 gas distribution is necessary to understand star formation in galaxies. Since H2 is not readily observable in the cold interstellar medium (ISM), the molecular gas content has traditionally been inferred using indirect tracers like carbon-monoxide (CO), dust emission, gamma ray interactions, and star formation efficiency. Physical processes resulting in enhancement and reduction of these indirect tracers can result in misleading estimates of molecular gas masses. My dissertation work is based on devising a new temperature power law distribution model for H2, a direct tracer, to calculate the total molecular gas mass in galaxies. The model parameters are estimated using mid infrared (MIR) H2 rotational line fluxes obtained from IRS-Spitzer (Infrared Spectrograph-Spitzer) instrument and the model is extrapolated to a suitable lower temperature to recover the total molecular gas mass. The power law model is able to recover the dark molecular gas, undetected by CO, in galaxies at metallicity as low as one-tenth of our Milky Way value. I have applied the power law model in U/LIRGs and shocks of Stephan's Quintet to understand molecular gas properties, where shocks play an important role in exciting H2. Comparing the molecular gas content derived through our power law model can be useful in studying the application of our model in mergers. The parameters derived by our model is useful in understanding variation in molecular gas properties in shock regions of Stephan's Quintet. Low mass stars are formed in small isolated dense cores known as Bok globules. Multiple star formation events are seen in a Bok globule. In my thesis I also studied a Bok globule, B207, and determined the physical properties and future evolutionary stage of the cloud. My thesis spans studying ISM properties in galaxies from kpc to sub-pc scales. Using the power law model in the coming era of James Webb Space Telescope (JWST) with the high sensitivity MIR Instrument (MIRI) spectrograph we will be able to understand the properties of molecular gas at low and high redshifts.

Herschel Far Infrared Spectra of Dusty Star-Forming Galaxies

NASA Astrophysics Data System (ADS)

Wilson, Derek; Cooray, Asantha R.; Nayyeri, Hooshang

2017-01-01

We stack archival spectra from the Herschel Space Observatory's SPIRE Spectrometer in three redshift bins from low redshifts (z < 0.2), through intermediate redshifts (0.2 < z < 1), and up to high redshifts (z > 1) in order to determine the average properties of the gas and dust in dusty, star-forming galaxies and (U)LIRGs. In the lower-redshift stack, we detect a host of water and carbon monoxide rotational transition lines, as well as some fine structure lines such as [NII]. At intermediate redshifts, only a [CII] line appears. The high-redshift stack displays strong [CII] emission, as well as faint emission from [OI] and [OIII]. The observed emission lines are used to model the average number density and radiation field strength in the photodissociation regions of our high-redshift sample, and the spectral line energy distributions of CO rotational transitions from the low-redshift stack are presented.

13CO 1-0 imaging of the Medusa merger, NGC 4194. Large scale variations in molecular cloud properties

NASA Astrophysics Data System (ADS)

Aalto, S.; Beswick, R.; Jütte, E.

2010-11-01

Aims: Studying molecular gas properties in merging galaxies gives important clues to the onset and evolution of interaction-triggered starbursts. The frac{12CO}{13CO} line intensity ratio can be used as a tracer of how dynamics and star formation processes impact the gas properties. The Medusa merger (NGC 4194) is particularly interesting to study since its {L_FIRover L_CO} ratio rivals that of ultraluminous galaxies (ULIRGs), despite the comparatively modest luminosity, indicating an exceptionally high star formation efficiency (SFE) in the Medusa merger. Methods: High resolution OVRO (Owens Valley Radio Observatory) observations of the 13CO 1-0 have been obtained and compared with matched resolution OVRO 12CO 1-0 data to investigate the molecular gas cloud properties in the Medusa merger. Results: Interferometric observations of 12CO and 13CO 1-0 in the Medusa (NGC 4194) merger show the {{12CO} over {13CO}} 1-0 intensity ratio ({\\cal R}) increases from normal, quiescent values (7-10) in the outer parts (r > 2 kpc) of the galaxy to high (16 to > 40) values in the central (r < 1 kpc) starburst region. In the central two kpc there is an east-west gradient in {\\cal R} where the line ratio changes by more than a factor of three over 5” (945 pc). The integrated 13CO emission peaks in the north-western starburst region while the central 12CO emission is strongly associated with the prominent crossing dust-lane. Conclusions: We discuss the central east-west gradient in {\\cal R} in the context of gas properties in the starburst and the central dust lane. We suggest that the central gradient in {\\cal R} is mainly caused by diffuse gas in the dust lane. In this scenario, the actual molecular mass distribution is better traced by the 13CO 1-0 emission than the 12CO. The possibilities of temperature and abundance gradients are also discussed. We compare the central gas properties of the Medusa to those of other minor mergers and suggest that the extreme and transient phase of the Medusa star formation activity has similar traits to those of high-redshift galaxies.

WISE and the Dusty Universe

NASA Technical Reports Server (NTRS)

Benford, Dominic J.

2010-01-01

The Wide-field Infrared Survey is a medium class Explorer mission that was launched onl4Dec 2009. WISE should detect hundreds of millions of stars and galaxies, including millions of ULIRGS and QSOs; hundreds of thousands of asteroids; and hundreds of cold brown dwarfs. The telescope cover was ejected on 29 Dec 2009 and the all-sky survey started on 14 Jan 2010. WISE takes more the 7000 framesets per day, with each frameset covering 0.6 square degrees in four bands centered at 3.4, 4.6, 12 and 22 microns. WISE is well-suited to the discovery of brown dwarfs, ultraluminous infrared galaxies, and near-Earth objects. With an angular resolution of 6 arcsecouds at 12 microns, a 5(sigma) point-source sensitivity of around 1 mJy at 12 microns and 6 mJy at 22 microns, and coverage of over 99% of the sky, WISE also provides a powerful database for the study of the dusty ISM in our own galaxy. A preliminary release of WISE data will be made available to the community 6 months after the end of the cryogenic survey, or about May 2011. The final data release will be 11 months later, about April 2012.

Spitzer/IRS spectroscopy of the 12um Seyferts

NASA Astrophysics Data System (ADS)

Wu, Yanling; Charmandaris, V.; Huang, J.; Houck, J.

2009-01-01

The extended 12um galaxy sample is a flux-limited sample of 893 galaxies selected from the IRAS Faint Source Catalog 2. A total of 118 objects from this sample have been classified optically as Seyfert galaxies, providing one of the largest infrared selected unbiased sample of active galactic nuclei (AGN). We present our prelimary results from our analysis of mid-infrared Spitzer/IRS spectra of 102 12um Seyferts (that is 86 % of the 12um Seyfert sample) which have been observed by various Spitzer programs and are available in the Spitzer archive. A number of mid-infared diagnostics have been developed to study the nature of nuclear dust enshrouded emission from AGNs, in order to disentangle the starburst-AGN connection. Since PAH emission is a tracer of star formation activity we have measured the 11.3um PAH feature for our Seyfert sample. We find that as the strength of the radiation field in AGNs increases the PAH molecules are destroyed, while the PAH EWs increase with the IRAS f60/f25 ratios of the host galaxies. We further probe this warm/cold color diagnostic, by contrasting our findings with those of we starbust galaxies, ULIRGs, as well as blue compact dwarf galaxies.

An Exploration of Dusty Galaxies

NASA Astrophysics Data System (ADS)

Kohler, Susanna

2017-04-01

Submillimeter galaxies i.e., galaxies that we detect in the submillimeter wavelength range are mysterious creatures. Its only within the last couple decades that weve had telescope technology capable of observing them, and were only now getting to the point where angular resolution limits allow us to examine them closely. A new study has taken advantage of new capabilities to explore the properties of a sample of 52 of thesegalaxies.Dusty Star FormationSubmillimeter galaxies are generally observed in the early universe. Though theyre faint in other wavebands, theyre extremely luminous in infrared and submillimeter their infrared luminosities are typically trillions of times the Suns luminosity. This is thought to be because these galaxies are very actively forming stars at rates of hundreds of times that of the Milky Way!Example 10 10 true-color images of ten submillimeter galaxies in the authors ALMA-identified sample. [Simpson et al. 2017]Submillimeter galaxies are also extremely dusty, so we dont see their star formation directly in optical wavelengths. Instead, we see the stellar light after its been absorbed and reemitted by interstellar dust lanes were indirectly observing heavily obscured star formation.Why look for submillimeter galaxies? Studying them can help us to learn about galaxy and star formation early in our universes history, and help us to understand how the universe has evolved into what we see locally today.Submillimeter StrugglesDue to angular resolution limitations in the past, we often couldnt pin down the exact locations of submillimeter galaxies, preventing us from examining them properly. But now a team of scientists has used the Atacama Large Millimeter/submillimeter array (ALMA) to precisely locate 52 submillimeter galaxies identified by the Submillimeter Common-User Bolometer Array (SCUBA-2) in the UKIDSS Ultra Deep Survey field.The precise locations made possible by ALMA allowed the team led by James Simpson (University of Edinburgh and Durham University) to identify the multi-wavelength properties of these galaxies in a pilot study that they hope to extend to many more similar galaxies in the future.Lessons from Distant GalaxiesWhat did Simpson and collaborators learn in this study?Photometric redshift distribution of the ALMA-identified submillimeter galaxies in the authors sample (grey). [Simpson et al. 2017]For the set of galaxies for which the team could measure photometric redshifts, the median redshift was z 2.65 (though redshifts ranged up to z 5).Submillimeter galaxies are cooler and larger than local far-infrared galaxies (known as ULIRGs). The authors therefore argue that its unlikely that ULIRGs are evolved versions of submillimeter galaxies.Estimates of dust mass in these galaxies suggest that effectively all of the optical-to-near-infrared light from colocated stars is obscured by dust.Estimates of the future stellar mass of these galaxies suggest that they cannot evolve into lenticular or spiral galaxies. Instead, the authors conclude, submillimeter galaxies must be the progenitors of local elliptical galaxies.CitationJ. M. Simpson et al 2017 ApJ 839 58. doi:10.3847/1538-4357/aa65d0

Multiwavelength Search and Studies of Active Galaxies

NASA Astrophysics Data System (ADS)

Mickaelian, A. M.

2016-06-01

Since 1950s, Byurakan Astrophysical Observatory (BAO) has always been one of the centres for surveys and studies of active galaxies. Here I review our search and studies of active galaxies during last 30 years using various wavelength ranges, as well as some recent related works. These projects since late 1980s were focused on multiwavelength search and studies of AGN and Starbursts (SB). 1103 blue stellar objects (BSOs) on the basis of their UV-excess were selected using Markarian Survey (First Byurakan Survey, FBS) plates and Markarian's criteria used for the galaxies. Among many blue stars, QSOs and Seyfert galaxies were found by follow-up observations. 1577 IRAS point sources were optically identified using FBS low-dispersion spectra and many AGN, SB and high-luminosity IR galaxies (LIRG/ULIRG) were discovered. 32 extremely high IR/opt flux ratio galaxies were studies with Spitzer. 2791 ROSAT FSC sources were optically identified using Hamburg Quasar Survey (HQS) low-dispersion spectra and many AGN were discovered by follow-up observations. Fine analysis of emission line spectra was carried out using spectral line decomposition software to establish true profiles and calculate physical parameters for the emitting regions, as well as to study the spectral variability of these objects. X-ray and radio selection criteria were used to find new AGN and variable objects for further studies. Multiwavelength approach allowed revealing many new AGN and SB and obtaining a number of interesting relations using their observational characteristics and physical properties.

Multiwavelength search and studies of active galaxies and quasars

NASA Astrophysics Data System (ADS)

Mickaelian, Areg M.

2017-12-01

The Byurakan Astrophysical Observatory (BAO) has always been one of the centres for surveys and studies of active galaxies. Here we review our search and studies of active galaxies during last 30 years using various wavelength ranges, as well as some recent related works. These projects since late 1980s were focused on multiwavelength search and studies of AGN and Starbursts (SB). 1103 blue stellar objects (BSOs) on the basis of their UV-excess were selected using Markarian Survey (First Byurakan Survey, FBS) plates and Markarian's criteria used for the galaxies. Among many blue stars, QSOs and Seyfert galaxies were found by follow-up observations. 1577 IRAS point sources were optically identified using FBS low-dispersion spectra and many AGN, SB and high-luminosity IR galaxies (LIRG/ULIRG) were discovered. 32 extremely high IR/opt flux ratio galaxies were studies with Spitzer. 2791 ROSAT FSC sources were optically identified using Hamburg Quasar Survey (HQS) low-dispersion spectra and many AGN were discovered by follow-up observations. Fine analysis of emission line spectra was carried out using spectral line decomposition software to establish true profiles and calculate physical parameters for the emitting regions, as well as to study the spectral variability of these objects. X-ray and radio selection criteria were used to find new AGN and variable objects for further studies. We have estimated AGN content of X-ray sources as 52.9%. We have also combined IRAS PSC and FSC catalogs and compiled its extragalactic sample, which allowed us to estimate AGN content among IR sources as 23.7%. Multiwavelength approach allowed revealing many new AGN and SB and obtaining a number of interesting relations using their observational characteristics and physical properties.

Spitzer 24 Micron Observations of Optical/Near-Infrared-Selected Extremely Red Galaxies: Evidence for Assembly of Massive Galaxies at Z approximately equal to 1-2?

NASA Technical Reports Server (NTRS)

Yan, Lin; Choi, Philip I.; Fadda, D.; Marleau, F. R.; Soifer, B. T.; Im, M.; Armus, L.; Frayer, D. T.; Storrie-Lombardi, L. J.; Thompson, D. J.;

Molecular Gas in Starburts: Understanding Mergers using High Density Gas Tracers

NASA Astrophysics Data System (ADS)

Manohar, Swarnima; Scoville, N.; Walter, F.; Sheth, K.

2014-01-01

NGC 6240 and Arp 220 can be considered the founding members of a very active class of objects called Ultraluminous Infrared Galaxies or ULIRGs. They are in different stages of mergers and hence are excellent case studies to enhance our knowledge about the merging process. We have imaged the dense star-forming regions of these galaxies at sub-arcsec resolution with ALMA and CARMA. Multi-band imaging allows multilevel excitation analysis of HCN, HCO+ and CS transitions which will constrain the properties of the gas as a function of position and velocity (across line profiles). We are doing an extensive multilevel excitation analysis of the merger as a function of radius which enables in depth understanding of the gas dynamics and gas properties such as temperature and density. This in turn probes the homogeneity of the gas in the merging system and hence the regions that facilitate high star formation rates. This tandem use of CARMA with ALMA to map these systems at different merger stages will assemble a more integrated picture of the merger process. We are probing the distribution and dynamics of star forming gas and star formation activity in the dense disk structures to enable new theoretical understanding of the physics, dynamics, star formation activity and associated feedback in the most active and rapidly evolving galactic nuclei. Here we present preliminary observations of Arp 220 and NGC 6240 from ALMA and CARMA.

A physical model for z ~ 2 dust-obscured galaxies

NASA Astrophysics Data System (ADS)

Narayanan, Desika; Dey, Arjun; Hayward, Christopher C.; Cox, Thomas J.; Bussmann, R. Shane; Brodwin, Mark; Jonsson, Patrik; Hopkins, Philip F.; Groves, Brent; Younger, Joshua D.; Hernquist, Lars

2010-09-01

We present a physical model for the origin of z ~ 2 dust-obscured galaxies (DOGs), a class of high-redshift ultraluminous infrared galaxies (ULIRGs) selected at 24μm which are particularly optically faint (F24μm/FR > 1000). By combining N-body/smoothed particle hydrodynamic simulations of high-redshift galaxy evolution with 3D polychromatic dust radiative transfer models, we find that luminous DOGs (with F24 >~ 0.3mJy at z ~ 2) are well modelled as extreme gas-rich mergers in massive (~5 × 1012-1013Msolar) haloes, with elevated star formation rates (SFR; ~500-1000Msolaryr-1) and/or significant active galactic nuclei (AGN) growth , whereas less luminous DOGs are more diverse in nature. At final coalescence, merger-driven DOGs transition from being starburst dominated to AGN dominated, evolving from a `bump' to a power-law (PL) shaped mid-IR (Infrared Array Camera, IRAC) spectral energy distribution (SED). After the DOG phase, the galaxy settles back to exhibiting a `bump' SED with bluer colours and lower SFRs. While canonically PL galaxies are associated with being AGN dominated, we find that the PL mid-IR SED can owe both to direct AGN contribution and to a heavily dust obscured stellar bump at times that the galaxy is starburst dominated. Thus, PL galaxies can be either starburst or AGN dominated. Less luminous DOGs can be well-represented either by mergers or by massive (Mbaryon ~ 5 × 1011Msolar) secularly evolving gas-rich disc galaxies (with SFR >~ 50Msolaryr-1). By utilizing similar models as those employed in the submillimetre galaxy (SMG) formation study of Narayanan et al., we investigate the connection between DOGs and SMGs. We find that the most heavily star-forming merger-driven DOGs can be selected as submillimetre galaxies, while both merger-driven and secularly evolving DOGs typically satisfy the BzK selection criteria. The model SEDs from the simulated galaxies match observed data reasonably well, though Mrk 231 and Arp 220 templates provide worse matches. Our models provide testable predictions of the physical masses, dust temperatures, CO linewidths and location on the MBH-Mbulge relation of DOGs. Finally, we provide public SED templates derived from these simulations. This paper is dedicated to the original DOG himself, Cordozar Calvin Broadus, Jr. E-mail: dnarayanan@cfa.harvard.edu ‡ CfA Fellow. § Carnegie Fellow. ¶ W. M. Keck Postdoctoral Fellow. ∥ Miller Fellow. ** Hubble Fellow.

Constraining the Orbits of the Supermassive Binary Blackhole Pair 0402+379

NASA Astrophysics Data System (ADS)

Holland, Ben; Peck, Alison B.; Taylor, Gregory B.; Zavala, Robert T.; Romani, Roger W.

2015-01-01

Galaxy mergers are a relatively common occurrence in the Universe. Given that most large galaxies harbor supermassive black holes in their centers, it should follow that two supermassive black holes could be found in the centers of galaxies that have recently undergone a merger event. Supermassive black hole binaries (SMBHB) with small separation (referred to as "tight binaries"), however, are quite rare, implying that the mergers happen less often than we think, or that the binary black hole merger happens much more quickly than expected from simulations. We present observations of one of the best candidates for a tight SMBHB, 0402+379, made in 2003, 2005, and 2009 using the VLBA at 3 frequencies, and report on their apparent relative component motions over this time frame. Additionally, these results are compared to earlier observations of 0402+379 which can help establish a long time baseline. This information, although still preliminary, can be used to provide constraints on the orbits of this binary system which in turn may yield insight as to why these binary systems are not significantly more commonly detected in, for example, ULIRGs in the late stages of merger.

Starburst or AGN Dominance in Submillimetre-Luminous Candidate AGN?

NASA Astrophysics Data System (ADS)

Coppin, Kristen; Pope, Alexandra; Menéndez-Delmestre, Karín; Alexander, David M.; Dunlop, James

2010-06-01

It is widely believed that ultraluminous infrared (IR) galaxies and active galactic nuclei (AGN) activity are triggered by galaxy interactions and merging, with the peak of activity occurring at z~2, where submillimetre galaxies are thousands of times more numerous than local ULIRGs. In this evolutionary picture, submillimetre galaxies (SMGs) would host an AGN, which would eventually grow a black hole (BH) strong enough to blow off all of the gas and dust leaving an optically luminous QSO. To probe this evolutionary sequence we have focussed on the `missing link' sources, which demonstrate both strong starburst (SB) and AGN signatures, in order to determine if the SB is the main power source even in SMGs when we have evidence that an AGN is present from their IRAC colours. The best way to determine if a dominant AGN is present is to look for their signatures in the mid-infrared with the Spitzer IRS, since often even deep X-ray observations miss identifying the presence of AGN in heavily dust-obscured SMGs. We present the results of our audit of the energy balance between star-formation and AGN within this special sub-population of SMGs-where the BH has grown appreciably to begin heating the dust emission.

Imaging the molecular outflows of the prototypical ULIRG NGC 6240 with ALMA

NASA Astrophysics Data System (ADS)

Saito, T.; Iono, D.; Ueda, J.; Espada, D.; Sliwa, K.; Nakanishi, K.; Lu, N.; Xu, C. K.; Michiyama, T.; Kaneko, H.; Yamashita, T.; Ando, M.; Yun, M. S.; Motohara, K.; Kawabe, R.

2018-03-01

We present 0.97 × 0.53 arcsec2 (470 pc × 250 pc) resolution CO (J = 2-1) observations towards the nearby luminous merging galaxy NGC 6240 with the Atacama Large Millimeter/submillimeter Array. We confirmed a strong CO concentration within the central 700 pc, which peaks between the double nuclei, surrounded by extended CO features along the optical dust lanes (˜11 kpc). We found that the CO emission around the central, a few kpc, has extremely broad velocity wings with full width at zero intensity ˜ 2000 km s-1, suggesting a possible signature of molecular outflow(s). In order to extract and visualize the high-velocity components in NGC 6240, we performed a multiple Gaussian fit to the CO data cube. The distribution of the broad CO components shows four extremely large line width regions (˜1000 km s-1) located 1-2 kpc away from both nuclei. Spatial coincidence of the large line width regions with H α, near-IR H2, and X-ray suggests that the broad CO (2-1) components are associated with nuclear outflows launched from the double nuclei.

Molecular Gas in Local Mergers: Understanding Mergers using High Density Gas Tracers

NASA Astrophysics Data System (ADS)

Manohar, Swarnima; Scoville, N.; Sheth, K.

2013-01-01

NGC 6240 and Arp 220 can be considered the founding members of a very active class of objects called Ultraluminous Infrared Galaxies or ULIRGs. They are in different stages of mergers and hence are excellent case studies to enhance our knowledge about the merging process. We have imaged the dense star-forming regions of these galaxies at sub-arcsec resolution with ALMA and CARMA. Multi-band imaging will allow multilevel excitation analysis of HCN, HCO+ and CS transitions which will be used to constrain the properties of the gas as a function of position and velocity (across line profiles). We aim to do an extensive multilevel excitation analysis of the merger as a function of radius which will enable in depth understanding of the gas dynamics and gas properties such as temperature and density. This will in turn probe the homogeneity of the gas in the merging system and hence the regions that facilitate high star formation rates. This tandem use of CARMA with ALMA to map these systems at different merger stages will help assemble a more integrated picture of the merger process. We will probe the distribution and dynamics of star forming gas and star formation activity in the dense disk structures to enable new theoretical understanding of the physics, dynamics, star formation activity and associated feedback in the most active and rapidly evolving galactic nuclei. Here we present preliminary observations of Arp 220 and NGC 6240 from ALMA and CARMA.

Molecular Gas in Starburts ARP 220 & NGC 6240: Understanding Mergers using High Density Gas Tracers

NASA Astrophysics Data System (ADS)

Manohar, Swarnima; Scoville, Nicholas; Sheth, Kartik

2015-01-01

NGC 6240 and Arp 220 can be considered the founding members of a very active class of objects called Ultraluminous Infrared Galaxies or ULIRGs. They are in different stages of mergers and hence are excellent case studies to enhance our knowledge about the merging process. We have imaged the dense star-forming regions of these galaxies at sub-arcsec resolution with ALMA and CARMA. Multi-band imaging allows multilevel excitation analysis of HCN, HCO+ and CS transitions which will constrain the properties of the gas as a function of position and velocity (across line profiles). We are doing an extensive multilevel excitation analysis of the merger as a function of radius which enables in depth understanding of the gas dynamics and gas properties such as temperature and density. This in turn probes the homogeneity of the gas in the merging system and hence the regions that facilitate high star formation rates. This tandem use of CARMA with ALMA to map these systems at different merger stages will assemble a more integrated picture of the merger process. We are probing the distribution and dynamics of star forming gas and star formation activity in the dense disk structures to enable new theoretical understanding of the physics, dynamics, star formation activity and associated feedback in the most active and rapidly evolving galactic nuclei. Here we present our observations of Arp 220 and NGC 6240 from ALMA and CARMA.

The Luminosity Function of Star Clusters in 20 Star-Forming Galaxies Based on Hubble Legacy Archive Photometry

NASA Astrophysics Data System (ADS)

Bowers, Ariel; Whitmore, B. C.; Chandar, R.; Larsen, S. S.

2014-01-01

Luminosity functions have been determined for star cluster populations in 20 nearby (4 - 30 Mpc), star-forming galaxies based on ACS source lists generated by the Hubble Legacy Archive (http://hla.stsci.edu). These cluster catalogs provide one of the largest sets of uniform, automatically-generated cluster candidates available in the literature at present. Comparisons are made with other recently generated cluster catalogs demonstrating that the HLA-generated catalogs are of similar quality, but in general do not go as deep. A typical cluster luminosity function can be approximated by a power-law, dN/dL ∝ Lα, with an average value for α of -2.37 and rms scatter = 0.18. A comparison of fitting results based on methods which use binned and unbinned data shows good agreement, although there may be a systematic tendency for the unbinned (maximum-likelihood) method to give slightly more negative values of α for galaxies with steper luminosity functions. Our uniform database results in a small scatter (0.5 magnitude) in the correlation between the magnitude of the brightest cluster (Mbrightest) and Log of the number of clusters brighter than MI = -9 (Log N). We also examine the magnitude of the brightest cluster vs. Log SFR for a sample including LIRGS and ULIRGS.

ON THE STAR FORMATION LAW FOR SPIRAL AND IRREGULAR GALAXIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Elmegreen, Bruce G., E-mail: bge@us.ibm.com

2015-12-01

A dynamical model for star formation on a galactic scale is proposed in which the interstellar medium is constantly condensing to star-forming clouds on the dynamical time of the average midplane density, and the clouds are constantly being disrupted on the dynamical timescale appropriate for their higher density. In this model, the areal star formation rate scales with the 1.5 power of the total gas column density throughout the main regions of spiral galaxies, and with a steeper power, 2, in the far outer regions and in dwarf irregular galaxies because of the flaring disks. At the same time, theremore » is a molecular star formation law that is linear in the main and outer parts of disks and in dIrrs because the duration of individual structures in the molecular phase is also the dynamical timescale, canceling the additional 0.5 power of surface density. The total gas consumption time scales directly with the midplane dynamical time, quenching star formation in the inner regions if there is no accretion, and sustaining star formation for ∼100 Gyr or more in the outer regions with no qualitative change in gas stability or molecular cloud properties. The ULIRG track follows from high densities in galaxy collisions.« less

Obscured Activity and Stellar Mass in z~0.7 Post-starburst Galaxies

NASA Astrophysics Data System (ADS)

Rieke, George; Diamond-Stanic, Aleks; Moustakas, John; Tremonti, Christy

2008-03-01

We are proposing 3.6-24 micron imaging of a sample of z~0.7 post-starburst galaxies. These galaxies are presumed to be late-stage mergers that have evolved past their ULIRG/quasar phase and are in transition to becoming early-type galaxies. We have detected outflowing winds with velocities ranging from 500-2200 km/s for 2/3 of the sample, so it is tempting to conclude that these spectacular outflows are the result of feedback from an AGN that has expelled cold gas quenched star formation. However, it is not clear that the existing near-UV and optical data are telling the full story. With Spitzer, we can verify whether or not these 'post-starburst' galaxies are truly quiescent by measuring the amount obscured star formation and black hole activity. We will also be able to determine how significant the recent starburst event was by accurately measuring stellar mass using the red end of the stellar SED. If these galaxies do have non-negligible dust emission, we will be able to use broad-band colors as blunt tools to measure spectral features and compare to known star-forming galaxies, AGNs, and LIRGs. If not, we will have strong evidence that the feedback event has been able to halt galaxy-wide star formation.

What Lurks in ULIRGs?—Probing the Chemistry and Excitation of Molecular Gas in the Nuclei of Arp 220 and NGC 6240

DOE Office of Scientific and Technical Information (OSTI.GOV)

Manohar, Swarnima; Scoville, Nick

We have imaged the dense star-forming regions of Arp 220 and NGC 6240 in the 3 mm band transitions of CO, HCN, HCO{sup +}, HNC, and CS at 0.″5–0.″8 resolution using CARMA. Our data set images all these lines at similar resolutions and high sensitivity, and can be used to derive line ratios of faint high excitation lines. In both the nuclei of Arp 220, the HCN/HNC ratios suggest chemistry of X-ray Dominated Regions (XDRs)—a likely signature of an active galactic nucleus. In NGC 6240, there is no evidence of XDR type chemistry, but there the bulk of the molecularmore » gas is concentrated between the nuclei rather than on them. We calculated molecular H{sub 2} densities from excitation analysis of each of the molecular species. It appears that the abundances of HNC and HCO{sup +} in Ultra Luminous Infrared Galaxies may be significantly different from those in galactic molecular clouds. The derived H{sub 2} volume densities are ∼5 × 10{sup 4} cm{sup −3} in the Arp 220 nuclei and ∼10{sup 4} cm{sup −3} in NGC 6240.« less

The Great Observatories All-Sky LIRG Survey: Herschel Image Atlas and Aperture Photometry

NASA Astrophysics Data System (ADS)

Chu, Jason K.; Sanders, D. B.; Larson, K. L.; Mazzarella, J. M.; Howell, J. H.; Díaz-Santos, T.; Xu, K. C.; Paladini, R.; Schulz, B.; Shupe, D.; Appleton, P.; Armus, L.; Billot, N.; Chan, B. H. P.; Evans, A. S.; Fadda, D.; Frayer, D. T.; Haan, S.; Ishida, C. M.; Iwasawa, K.; Kim, D.-C.; Lord, S.; Murphy, E.; Petric, A.; Privon, G. C.; Surace, J. A.; Treister, E.

2017-04-01

Far-infrared images and photometry are presented for 201 Luminous and Ultraluminous Infrared Galaxies [LIRGs: log ({L}{IR}/{L}⊙ )=11.00{--}11.99, ULIRGs: log ({L}{IR}/{L}⊙ )=12.00{--}12.99], in the Great Observatories All-Sky LIRG Survey (GOALS), based on observations with the Herschel Space Observatory Photodetector Array Camera and Spectrometer (PACS) and the Spectral and Photometric Imaging Receiver (SPIRE) instruments. The image atlas displays each GOALS target in the three PACS bands (70, 100, and 160 μm) and the three SPIRE bands (250, 350, and 500 μm), optimized to reveal structures at both high and low surface brightness levels, with images scaled to simplify comparison of structures in the same physical areas of ˜100 × 100 kpc2. Flux densities of companion galaxies in merging systems are provided where possible, depending on their angular separation and the spatial resolution in each passband, along with integrated system fluxes (sum of components). This data set constitutes the imaging and photometric component of the GOALS Herschel OT1 observing program, and is complementary to atlases presented for the Hubble Space Telescope, Spitzer Space Telescope, and Chandra X-ray Observatory. Collectively, these data will enable a wide range of detailed studies of active galactic nucleus and starburst activity within the most luminous infrared galaxies in the local universe. Based on Herschel Space Observatory observations. Herschel is an ESA space observatory with science instruments provided by the European-led Principal Investigator consortia, and important participation from NASA.

Submillimeter H2O and H2O+emission in lensed ultra- and hyper-luminous infrared galaxies at z 2-4

NASA Astrophysics Data System (ADS)

Yang, C.; Omont, A.; Beelen, A.; González-Alfonso, E.; Neri, R.; Gao, Y.; van der Werf, P.; Weiß, A.; Gavazzi, R.; Falstad, N.; Baker, A. J.; Bussmann, R. S.; Cooray, A.; Cox, P.; Dannerbauer, H.; Dye, S.; Guélin, M.; Ivison, R.; Krips, M.; Lehnert, M.; Michałowski, M. J.; Riechers, D. A.; Spaans, M.; Valiante, E.

2016-11-01

We report rest-frame submillimeter H2O emission line observations of 11 ultra- or hyper-luminous infrared galaxies (ULIRGs or HyLIRGs) at z 2-4 selected among the brightest lensed galaxies discovered in the Herschel-Astrophysical Terahertz Large Area Survey (H-ATLAS). Using the IRAM NOrthern Extended Millimeter Array (NOEMA), we have detected 14 new H2O emission lines. These include five 321-312ortho-H2O lines (Eup/k = 305 K) and nine J = 2 para-H2O lines, either 202-111(Eup/k = 101 K) or 211-202(Eup/k = 137 K). The apparent luminosities of the H2O emission lines are μLH2O 6-21 × 108 L⊙ (3 <μ< 15, where μ is the lens magnification factor), with velocity-integrated line fluxes ranging from 4-15 Jy km s-1. We have also observed CO emission lines using EMIR on the IRAM 30 m telescope in seven sources (most of those have not yet had their CO emission lines observed). The velocity widths for CO and H2O lines are found to be similar, generally within 1σ errors in the same source. With almost comparable integrated flux densities to those of the high-J CO line (ratios range from 0.4 to 1.1), H2O is found to be among the strongest molecular emitters in high-redshift Hy/ULIRGs. We also confirm our previously found correlation between luminosity of H2O (LH2O) and infrared (LIR) that LH2O LIR1.1-1.2, with ournew detections. This correlation could be explained by a dominant role of far-infrared pumping in the H2O excitation. Modelling reveals that the far-infrared radiation fields have warm dust temperature Twarm 45-75 K, H2O column density per unit velocity interval NH2O /ΔV ≳ 0.3 × 1015 cm-2 km-1 s and 100 μm continuum opacity τ100> 1 (optically thick), indicating that H2O is likely to trace highly obscured warm dense gas. However, further observations of J ≥ 4 H2O lines are needed to better constrain the continuum optical depth and other physical conditions of the molecular gas and dust. We have also detected H2O+ emission in three sources. A tight correlation between LH2O and LH2O+ has been found in galaxies from low to high redshift. The velocity-integrated flux density ratio between H2O+ and H2O suggests that cosmic rays generated by strong star formation are possibly driving the H2O+ formation. Herschel is an ESA space observatory with science instruments provided by European-led Principal Investigator consortia and with important participation from NASA.The reduced spectra as FITS files are only available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (http://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/595/A80

Resolving Star Formation, Multiphase ISM Structure, and Wind Driving with MHD and RHD Models of Galactic Disks

NASA Astrophysics Data System (ADS)

Ostriker, Eve

Current studies of star and galaxy formation have concluded that energetic feedback from young stars and supernovae (SNe) is crucial, both for controlling observed interstellar medium (ISM) properties and star formation rates in the Milky Way and other galaxies, and for driving galactic winds that govern the baryon abundance in dark matter halos. However, in many numerical studies of the ISM, energy inputs have not been implemented self-consistently with the evolving rate of gravitational collapse to make stars, or have considered only isolated star-forming clouds without a realistic galactic environment (including sheared rotation and externally-originating SNe), or have not directly incorporated radiation, magnetic, and chemical effects that are important or even dominant. In models of galaxy formation and evolution in the cosmic context, galactic winds are indispensable but highly uncertain as the physics of superbubble evolution and radiation-gas interactions cannot be resolved. Our central objectives are (1) to address the above limitations of current models, developing self-consistent simulations of the multiphase ISM in disk galaxies that resolve both star formation and stellar feedback, covering the range of scales needed to connect star cluster formation to galactic superwind ejection, and the range of environments from dwarfs to ULIRGs; and (2) to analyze the detailed properties of the gas, magnetic field, radiation field, and star formation/SNe in our simulations, including dependencies on local galactic disk environment, and to connect intrinsic properties with observable diagnostics. The proposed project will employ the Athena code for numerical magneto-hydrodynamic (MHD) and radiation-hydrodynamic (RHD) simulations, using comprehensive physics modules that have been developed, tested, and demonstrated in sample simulations. We will consider local ``shearing box'' disk models with gas surface density Sigma = 2 - 10,000 Msun/pc^2, and a range of stellar potentials and galactic rotation rates. Our simulations follow all thermal phases of the gas, the driving of turbulence, and the expulsion of material in high-velocity galactic winds as well as the circulation of lowervelocity material in galactic ``fountains.'' We resolve gravitational collapse and apply stellar population modeling to determine radiation emitted by star cluster particles, and both in situ and runaway O-star SN events. With time-dependent chemistry, we will be able to follow C+/C/CO transitions and assess the relationship between the observed molecular component and self-gravitating or diffuse clouds in varying galactic environments, also determining how cloud properties (e.g. distributions of mass, size, virial parameter, internal/external pressure, magnetization) and lifetimes depend on environment. We will also investigate the dependence on local galactic environment of: * mass and volume fractions, and turbulent and magnetic state, of each thermal and chemical ISM phase * star formation rate, and galactic wind mass loss rate in each ISM phase * metrics of ISM energy gain/loss, large-scale force balance, wind acceleration * roles of SN and radiation feedback in setting cloud SFEs, overall SFRs, and wind massloss rates Our models will be valuable for interpreting a wide range of observations with Chandra, Hubble, Spitzer, Herschel, Planck, and ground-based telescopes. Obtaining self-consistent solutions for the dynamical, thermal, magnetic, chemical, and radiative state of the star-forming ISM is a long-sought goal of galactic theory. Understanding why ISM and star formation properties vary among and within galaxies is essential for interpreting new multiwavelength extragalactic surveys. Connecting galactic winds to star formation via resolved physical mechanisms will provide a missing link in contemporary galaxy formation models. With our planned research program, we are in a position to achieve all of these advances.

Constraints on the OH-to-H Abundance Ratio in Infrared-bright Galaxies Derived from the Strength of the OH 35 μm Absorption Feature

NASA Astrophysics Data System (ADS)

Stone, Myra; Veilleux, Sylvain; González-Alfonso, Eduardo; Spoon, Henrik; Sturm, Eckhard

2018-02-01

We analyze Spitzer/InfraRed Spectrograph (IRS) observations of the OH 35 μm feature in 15 nearby (z ≲ 0.06) (ultra-)luminous infrared galaxies (U/LIRGs). All objects exhibit OH 35 μm purely in absorption, as expected. The small optical depth of this transition makes the strength of this feature a good indicator of the true OH column density. The measured OH 35 μm equivalent widths imply an average OH column density and a 1-σ standard deviation to the mean of {N}{OH}=1.31+/- 0.22× {10}17 cm‑2. This number is then compared with the hydrogen column density for a typical optical depth at 35 μm of ∼0.5 and gas-to-dust ratio of 125 to derive an OH-to-H abundance ratio of {X}{OH}=1.01+/- 0.15× {10}-6. This abundance ratio is formally a lower limit. It is consistent with the values generally assumed in the literature. The OH 35 μm line profiles predicted from published radiative transfer models constrained by observations of OH 65, 79, 84, and 119 μm in 5 objects (Mrk 231, Mrk 273, IRAS F05189-2524, IRAS F08572+3915, and IRAS F20551-4250) are also found to be consistent with the IRS OH 35 μm spectra.

Deep JVLA Imaging of GOODS-N at 20 cm

NASA Astrophysics Data System (ADS)

Owen, Frazer N.

2018-04-01

New wideband continuum observations in the 1–2 GHz band of the GOODS-N field using NSF’s Karl G. Jansky Very Large Array (VLA) are presented. The best image with an effective frequency of 1525 MHz reaches an rms noise in the field center of 2.2 μJy, with 1.″6 resolution. A catalog of 795 sources is presented covering a radius of 9 arcminutes centered near the nominal center for the GOODS-N field, very near the nominal VLA pointing center for the observations. Optical/NIR identifications and redshift estimates both from ground-based and HST observations are discussed. Using these optical/NIR data, it is most likely that fewer than 2% of the sources without confusion problems do not have a correct identification. A large subset of the detected sources have radio sizes >1″. It is shown that the radio orientations for such sources correlate well with the HST source orientations, especially for z < 1. This suggests that a least a large subset of the 10 kpc-scale disks of luminous infrared/ultraluminous infrared galaxies (LIRG/ULIRG) have strong star formation, not just in the nucleus. For the half of the objects with z > 1, the sample must be some mixture of very high star formation rates, typically 300 M ⊙ yr‑1, assuming pure star formation, and an active galactic nucleus (AGN) or a mixed AGN/star formation population.

The Bright and Dark Sides of High-redshift Starburst Galaxies from Herschel and Subaru Observations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Puglisi, A.; Rodighiero, G.; Rodríguez-Muñoz, L.

2017-04-01

We present rest-frame optical spectra from the FMOS-COSMOS survey of 12 z ∼ 1.6 Herschel starburst galaxies, with star formation rate (SFR) elevated by ×8, on average, above the star-forming main sequence (MS). Comparing the H α to IR luminosity ratio and the Balmer decrement, we find that the optically thin regions of the sources contain on average only ∼10% of the total SFR, whereas ∼90% come from an extremely obscured component that is revealed only by far-IR observations and is optically thick even in H α . We measure the [N ii]{sub 6583}/H α ratio, suggesting that the lessmore » obscured regions have a metal content similar to that of the MS population at the same stellar masses and redshifts. However, our objects appear to be metal-rich outliers from the metallicity–SFR anticorrelation observed at fixed stellar mass for the MS population. The [S ii]{sub 6732}/[S ii]{sub 6717} ratio from the average spectrum indicates an electron density n {sub e} ∼ 1100 cm{sup −3} , larger than what was estimated for MS galaxies but only at the 1.5 σ level. Our results provide supporting evidence that high- z MS outliers are analogous of local ULIRGs and are consistent with a major-merger origin for the starburst event.« less

Discovery of a Mid-infrared Echo from the TDE Candidate in the Nucleus of ULIRG F01004-2237

NASA Astrophysics Data System (ADS)

Dou, Liming; Wang, Tinggui; Yan, Lin; Jiang, Ning; Yang, Chenwei; Cutri, Roc M.; Mainzer, Amy; Peng, Bo

2017-05-01

We present the mid-infrared (MIR) light curves (LCs) of a tidal disruption event candidate in the center of a nearby ultraluminous infrared galaxy F01004-2237 using archival WISE and NEOWISE data from 2010 to 2016. At the peak of the optical flare, F01004-2237 was IR quiescent. About three years later, its MIR fluxes have shown a steady increase, rising by 1.34 and 1.04 mag in 3.4 and 4.6 μm up to the end of 2016. The host-subtracted MIR peak luminosity is 2-3 × 1044 erg s-1. We interpret the MIR LCs as an infrared echo, I.e., dust reprocessed emission of the optical flare. Fitting the MIR LCs using our dust model, we infer a dust torus of the size of a few parsecs at some inclined angle. The derived dust temperatures range from 590-850 K, and the warm dust mass is ˜7 M ⊙. Such a large mass implies that the dust cannot be newly formed. We also derive the UV luminosity of 4-11 × 1044 erg s-1. The inferred total IR energy is 1-2 × 1052 erg, suggesting a large dust covering factor. Finally, our dust model suggests that the long tail of the optical flare could be due to dust scattering.

DUST CONTINUUM EMISSION AS A TRACER OF GAS MASS IN GALAXIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Groves, Brent A.; Schinnerer, Eva; Walter, Fabian

2015-01-20

We use a sample of 36 galaxies from the KINGFISH (Herschel IR), HERACLES (IRAM CO), and THINGS (Very Large Array H I) surveys to study empirical relations between Herschel infrared (IR) luminosities and the total mass of the interstellar gas (H{sub 2} + H I). Such a comparison provides a simple empirical relationship without introducing the uncertainty of dust model fitting. We find tight correlations, and provide fits to these relations, between Herschel luminosities and the total gas mass integrated over entire galaxies, with the tightest, almost linear, correlation found for the longest wavelength data (SPIRE 500). However, we findmore » that accounting for the gas-phase metallicity (affecting the dust to gas ratio) is crucial when applying these relations to low-mass, and presumably high-redshift, galaxies. The molecular (H{sub 2}) gas mass is found to be better correlated with the peak of the IR emission (e.g., PACS160), driven mostly by the correlation of stellar mass and mean dust temperature. When examining these relations as a function of galactocentric radius, we find the same correlations, albeit with a larger scatter, up to a radius of r ∼ 0.7 r {sub 25} (containing most of a galaxy's baryonic mass). However, beyond that radius, the same correlations no longer hold, with increasing gas (predominantly H I) mass relative to the infrared emission. The tight relations found for the bulk of the galaxy's baryonic content suggest that total gas masses of disk-like (non-merging/ULIRG) galaxies can be inferred from far-infrared continuum measurements in situations where only the latter are available, e.g., in ALMA continuum observations of high-redshift galaxies.« less

Infrared Abundances and the Chemical Enrichment of the Universe

NASA Astrophysics Data System (ADS)

Smith, J. D.

Elements heavier than helium make up only a small fraction of the mass of the present day Universe, yet they heavily impact how galaxies and stars form and evolve. The chemical enrichment history of the Universe therefore forms an essential part of any complete understanding of galaxy evolution, and with the advent of incredibly sensitive IR/sub-mm/radio facilities, we are poised to begin unraveling it. Nonetheless, significant, decades-old problems plague even the most data-rich local methods of measuring gas phase metal abundance, with large (up to 10x) disagreements stemming principally from unknown and unseen temperature structure in ionized gas. The farinfared fine structure lines of oxygen offer a path out of this deadlock. Oxygen is the most important coolant of ionized gas, and the dominant metal abundance indicator. Its ground state fine structure lines, in particular [OIII] 88¼m, arise from such low-lying energy levels that they are insensitive to temperature. And unlike the faint "auroral" lines used by the gold-standard direct abundance method, they are bright, and readily observable at all metallicities. Indeed this crucial line has already been observed with ALMA in a number of galaxies directly in the era of reionization at z=7-9. Herschel has mapped and archived more than 150 nearby (d<25Mpc) galaxies on scales of 1 kiloparsec and below in the important [OIII] 88¼m line. We propose a comprehensive program to develop the far-infrared fine structure lines of oxygen into direct, empirical gas phase metal abundance measures. We will validate directly against the largest, deepest survey of direct spectroscopic optical metal abundances ever undertaken - the LBT/MODS program CHAOS. We will leverage spatially matched nebular emission lines ([NeII], [NeIII], [SIII], [SIV]) from Spitzer/IRS for ionization balance. We will employ our extensive optical IFU data (PPAK, MUSE, and VENGA) for strong line abundance comparisons, and to bridge the physical scales between Herschel/Spitzer and CHAOS. In addition, we will combine and validate decomposed radio free-free continuum as an extinction-free substitute for recombination emission for hydrogen normalization. This is the first time this unique combination of ionized gas tracers from optical through radio - spanning a factor of 200,000 in wavelength - will have been brought together on the same physical scales in a large and widely varied sample of nearby galaxies. The suite of hybrid abundance indicators we produce will enable empirical, intercomparable, temperature-insensitive, extinction-free measurements of gas phase metal abundance both locally and at high-redshift, even in dusty systems like ULIRGs where inferring abundance has traditionally been impossible. The results will impact, if not resolve, a decades long debate on the true oxygen abundance scale for galaxies. As natural byproducts of this study, we will also (1) construct a system of best practices for determining abundances of high redshift galaxies from fine structure emission lines and related measurements, and (2) produce and deliver a large line atlas of many thousands of independent spatially resolved regions within galaxies in their principal optical, mid- and far-infrared emission lines, enabling many additional studies.

Analysis of the Science and Technology Preservice Teachers' Opinions on Teaching Evolution and Theory of Evolution

ERIC Educational Resources Information Center

Töman, Ufuk; Karatas, Faik Özgür; Çimer, Sabiha Odabasi

2014-01-01

In this study, we investigate of science and technology teachers' opinions about the theory of evolution and the evolution teaching. The aim of this study, we investigate of science and technology teachers' opinions about the theory of evolution and the evolution teaching. This study is a descriptive study. Open-ended questions were used to…

When Feedback Fails: The Scaling and Saturation of Star Formation Efficiency

NASA Astrophysics Data System (ADS)

Y Grudic, Michael; Hopkins, Philip F.; Faucher-Giguere, Claude-Andre; Quataert, Eliot; Murray, Norman W.; Keres, Dusan

2017-06-01

We present a suite of 3D multi-physics MHD simulations following star formation in isolated turbulent molecular gas disks ranging from 5 to 500 parsecs in radius. These simulations are designed to survey the range of surface densities between those typical of Milky Way GMCs (˜100 M⊙pc-2) and extreme ULIRG environments (˜104M⊙pc-2) so as to map out the scaling of star formation efficiency (SFE) between these two regimes. The simulations include prescriptions for supernova, stellar wind, and radiative feedback, which we find to be essential in determining both the instantaneous (ɛff) and integrated (ɛint) star formation efficiencies. In all simulations, the gas disks form stars until a critical stellar mass has been reached and the remaining gas is blown out by stellar feedback. We find that surface density is the best predictor of ɛint of all of the gas cloud's global properties, as suggested by analytic force balance arguments from previous works. Furthermore, SFE eventually saturates to ˜1 at high surface density, with very good agreement across different spatial scales. We also find a roughly proportional relationship between ɛff and ɛint. These results have implications for star formation in galactic disks, the nature and fate of nuclear starbursts, and the formation of bound star clusters. The scaling of ɛff also contradicts star formation models in which ɛff˜1% universally, including popular subgrid models for galaxy simulations.

Discovery of a Mid-infrared Echo from the TDE Candidate in the Nucleus of ULIRG F01004−2237

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dou, Liming; Wang, Tinggui; Jiang, Ning

2017-05-20

We present the mid-infrared (MIR) light curves (LCs) of a tidal disruption event candidate in the center of a nearby ultraluminous infrared galaxy F01004−2237 using archival WISE and NEOWISE data from 2010 to 2016. At the peak of the optical flare, F01004−2237 was IR quiescent. About three years later, its MIR fluxes have shown a steady increase, rising by 1.34 and 1.04 mag in 3.4 and 4.6 μ m up to the end of 2016. The host-subtracted MIR peak luminosity is 2–3 × 10{sup 44} erg s{sup −1}. We interpret the MIR LCs as an infrared echo, i.e., dust reprocessedmore » emission of the optical flare. Fitting the MIR LCs using our dust model, we infer a dust torus of the size of a few parsecs at some inclined angle. The derived dust temperatures range from 590–850 K, and the warm dust mass is ∼7 M {sub ⊙}. Such a large mass implies that the dust cannot be newly formed. We also derive the UV luminosity of 4–11 × 10{sup 44} erg s{sup −1}. The inferred total IR energy is 1–2 × 10{sup 52} erg, suggesting a large dust covering factor. Finally, our dust model suggests that the long tail of the optical flare could be due to dust scattering.« less

ALMA observations of the host galaxy of GRB 090423 at z = 8.23: deep limits on obscured star formation 630 million years after the big bang

DOE Office of Scientific and Technical Information (OSTI.GOV)

Berger, E.; Zauderer, B. A.; Chary, R.-R.

2014-12-01

We present rest-frame far-infrared (FIR) and optical observations of the host galaxy of GRB 090423 at z = 8.23 from the Atacama Large Millimeter Array (ALMA) and the Spitzer Space Telescope, respectively. The host remains undetected to 3σ limits of F {sub ν}(222 GHz) ≲ 33 μJy and F {sub ν}(3.6 μm) ≲ 81 nJy. The FIR limit is about 20 times fainter than the luminosity of the local ULIRG Arp 220 and comparable to the local starburst M 82. Comparing this with model spectral energy distributions, we place a limit on the infrared (IR) luminosity of L {sub IR}(8-1000more » μm) ≲ 3 × 10{sup 10} L {sub ☉}, corresponding to a limit on the obscured star formation rate of SFR{sub IR}≲5 M {sub ☉} yr{sup –1}. For comparison, the limit on the unobscured star formation rate from Hubble Space Telescope rest-frame ultraviolet (UV) observations is SFR{sub UV} ≲ 1 M {sub ☉} yr{sup –1}. We also place a limit on the host galaxy stellar mass of M {sub *} ≲ 5 × 10{sup 7} M {sub ☉} (for a stellar population age of 100 Myr and constant star formation rate). Finally, we compare our millimeter observations to those of field galaxies at z ≳ 4 (Lyman break galaxies, Lyα emitters, and submillimeter galaxies) and find that our limit on the FIR luminosity is the most constraining to date, although the field galaxies have much larger rest-frame UV/optical luminosities than the host of GRB 090423 by virtue of their selection techniques. We conclude that GRB host galaxies at z ≳ 4, especially those with measured interstellar medium metallicities from afterglow spectroscopy, are an attractive sample for future ALMA studies of high redshift obscured star formation.« less

Spatial Distribution of Star Formation in High Redshift Galaxies

NASA Astrophysics Data System (ADS)

Cunnyngham, Ian; Takamiya, M.; Willmer, C.; Chun, M.; Young, M.

2011-01-01

Integral field unit spectroscopy taken of galaxies with redshifts between 0.6 and 0.8 utilizing Gemini Observatory’s GMOS instrument were used to investigate the spatial distribution of star-forming regions by measuring the Hβ and [OII]λ3727 emission line fluxes. These galaxies were selected based on the strength of Hβ and [OII]λ3727 as measured from slit LRIS/Keck spectra. The process of calibrating and reducing data into cubes -- possessing two spatial dimensions, and one for wavelength -- was automated via a custom batch script using the Gemini IRAF routines. Among these galaxies only the bluest sources clearly show [OII] in the IFU regardless of total galaxy luminosity. The brightest galaxies lack [OII] emission and it is posited that two different modes of star formation exist among this seemingly homogeneous group of z=0.7 star-forming galaxies. In order to increase the galaxy sample to include redshifts from 0.3 to 0.9, public Gemini IFU data are being sought. Python scripts were written to mine the Gemini Science Archive for candidate observations, cross-reference the target of these observations with information from the NASA Extragalactic Database, and then present the resultant database in sortable, searchable, cross-linked web-interface using Django to facilitate navigation. By increasing the sample, we expect to characterize these two different modes of star formation which could be high-redshift counterparts of the U/LIRGs and dwarf starburst galaxies like NGC 1569/NGC 4449. The authors acknowledge funds provided by the National Science Foundation (AST 0909240).

Broad [C II] Line Wings as Tracer of Molecular and Multi-phase Outflows in Infrared Bright Galaxies

NASA Astrophysics Data System (ADS)

Janssen, A. W.; Christopher, N.; Sturm, E.; Veilleux, S.; Contursi, A.; González-Alfonso, E.; Fischer, J.; Davies, R.; Verma, A.; Graciá-Carpio, J.; Genzel, R.; Lutz, D.; Sternberg, A.; Tacconi, L.; Burtscher, L.; Poglitsch, A.

2016-05-01

We report a tentative correlation between the outflow characteristics derived from OH absorption at 119 μm and [C II] emission at 158 μm in a sample of 22 local and bright ultraluminous infrared galaxies (ULIRGs). For this sample, we investigate whether [C II] broad wings are a good tracer of molecular outflows, and how the two tracers are connected. Fourteen objects in our sample have a broad wing component as traced by [C II], and all of these also show OH119 absorption indicative of an outflow (in one case an inflow). The other eight cases, where no broad [C II] component was found, are predominantly objects with no OH outflow or a low-velocity (≤100 km s-1) OH outflow. The FWHM of the broad [C II] component shows a trend with the OH119 blueshifted velocity, although with significant scatter. Moreover, and despite large uncertainties, the outflow masses derived from OH and broad [C II] show a 1:1 relation. The main conclusion is therefore that broad [C II] wings can be used to trace molecular outflows. This may be particularly relevant at high redshift, where the usual tracers of molecular gas (like low-J CO lines) become hard to observe. Additionally, observations of blueshifted Na I D λλ 5890, 5896 absorption are available for 10 of our sources. Outflow velocities of Na I D show a trend with OH velocity and broad [C II] FWHM. These observations suggest that the atomic and molecular gas phases of the outflow are connected.

Spitzer Imaging of Planck-Herschel Dusty Proto-Clusters at z=2-3

NASA Astrophysics Data System (ADS)

Cooray, Asantha; Ma, Jingzhe; Greenslade, Joshua; Kubo, Mariko; Nayyeri, Hooshang; Clements, David; Cheng, Tai-An

2018-05-01

We have recently introduced a new proto-cluster selection technique by combing Herschel/SPIRE imaging data and Planck/HFIk all-sky survey point source catalog. These sources are identified as Planck point sources with clumps of Herschel source over-densities with far-IR colors comparable to z=0 ULIRGS redshifted to z=2 to 3. The selection is sensitive to dusty starbursts and obscured QSOs and we have recovered couple of the known proto-clusters and close to 30 new proto-clusters. The candidate proto-clusters selected from this technique have far-IR flux densities several times higher than those that are optically selected, such as using LBG selection, implying that the member galaxies are in a special phase of heightened dusty starburst and dusty QSO activity. This far-IR luminous phase may be short but likely to be necessary piece to understand the whole stellar mass assembly history of clusters. Moreover, our photo-clusters are missed in optical selections, suggesting that optically selected proto-clusters alone do not provide adequate statistics and a comparison of the far-IR and optical selected clusters may reveal the importance of the dusty stellar mass assembly. Here, we propose IRAC observations of six of the highest priority new proto-clusters, to establish the validity of the technique and to determine the total stellar mass through SED models. For a modest observing time the science program will have a substantial impact on an upcoming science topic in cosmology with implications for observations with JWST and WFIRST to understand the mass assembly in the universe.

Physical conditions of the interstellar medium in high-redshift submillimetre bright galaxies

NASA Astrophysics Data System (ADS)

Yang, Chentao

2017-12-01

The discovery of a population of high- redshift dust-obscured submillimeter galaxies (SMGs) from ground-based submm cameras has revolutionised our understanding of galaxy evolution and star formation in extreme conditions. They are the strongest starbursts in the Universe approaching the Eddington limit and are believed to be the progenitors of the most massive galaxies today. However, theoretical models of galaxy evolution have even been challenged by a large number of detections of high-redshift SMGs. A very few among them are gravitationally lensed by an intervening galaxy. Recent wide-area extragalactic surveys have discovered hundreds of such strongly lensed SMGs, opening new exciting opportunities for observing the interstellar medium in these exceptional objects. We have thus carefully selected a sample of strongly gravitational lensed SMGs based on the submillimeter flux limit from the Herschel-ATLAS sample. Using IRAM telescopes, we have built a rich H2O-line-detected sample of 16 SMGs. We found a close-to-linear tight correlation between the H2O line and total infrared luminosity. This indicates the importance of far-IR pumping to the excitation of the H2O lines. Using a far-IR pumping model, we have derived the physical properties of the H2O gas and the dust. We showed that H2O lines trace a warm dense gas that may be closely related to the active star formation. Along with the H2O lines, several H2O+ lines have also been detected in three of our SMGs. We also find a tight correlation between the luminosity of the lines of H2O and H2O+ from local ULIRGs to high-redshift SMGs. The flux ratio between H2O+ and H2O suggests that cosmic rays from strong star forming activities are possibly driving the related oxygen chemistry. Another important common molecular gas tracer is the CO line. We have observed multiple transitions of the CO lines in each of our SMGs with IRAM 30m telescope. By analysing the CO line profile, we discovered a significant differential lensing effect that might cause underestimation of the linewidth by a factor of 2. Using LVG modelling and fitting the multi-J CO fluxes via a Bayesian approach, we derived gas densities and temperature, and CO column density per unit velocity gradient. We then found a correlation between the gas thermal pressure and the star formation efficiency. We have also studied the global properties of the molecular gas and its relationship with star formation. We have derived the gas to dust mass ratio and the gas depletion time, they show no difference compared with other SMGs. With the detections of atomic carbon lines in our SMGs, we extended the local linear correlation between the CO and CI line luminosity. Finally, we compared the linewidths of the CO and H2O emission line, which agree very well with each other. This suggests that the emitting regions of these two molecules are likely to be co-spatially located. In order to understand the properties of molecular emission in high-redshift SMGs, and more generally, the structure and the dynamical properties of these galaxies, it is crucial to acquire high-resolution images. We thus observed two of our brightest sources with ALMA and NOEMA interferometers using their high spatial resolution configuration. These images have allowed us to reconstruct the intrinsic morphology of the sources. We compared the CO, H2O and dust emission. The cold dust emission has a smaller size compared with the CO and H2O gas, while the latter two are similar in size. By fitting the dynamical model to the CO data of the source, we have shown that the source can be modelled with a rotating disk. We derived the projected dynamical mass and the effective radius of those sources. With the future NOEMA and ALMA, we will be able to extend such kind of observations to a larger sample lensed SMGs and even to unlensed SMGs, to study various gas tracers, and to understand the physical conditions of the ISM and their relation to the star formation.

Simulations of dust in interacting galaxies

NASA Astrophysics Data System (ADS)

Jonsson, Patrik

This dissertation studies the effects of dust in N-body simulations of interacting galaxies. A new Monte-Carlo radiative-transfer code, Sunrise , is used in conjunction with hydrodynamic simulations. Results from radiative- transfer calculations in over 20 SPH simulations of disk-galaxy major mergers (Cox, 2004) are presented. Dust has a profound effect on the appearance of these simulations. At peak luminosities, 90% of the bolometric luminosity is absorbed by dust. The dust obscuration increases with luminosity in such a way that the brightness at UV/ visual wavelengths remains roughly constant. A general relationship between the fraction of energy absorbed and the ratio of bolometric luminosity to baryonic mass is found to hold in galaxies with metallicities >0.7 [Special characters omitted.] over a factor of 50 in mass. The accuracy to which the simulations describe observed starburst galaxies is evaluated by comparing them to observations by Meurer et al. (1999) and Heckman et al. (1998). The simulations are found to follow a relation similar to the IRX-b relation found by Meurer et al. (1999) when similar luminosity objects are considered. The highest-luminosity simulated galaxies depart from this relation and occupy the region where local LIRGs/ULIRGs are found. Comparing to the Heckman et al. (1998) sample, the simulations are found to obey the same relations between UV luminosity, UV color, IR luminosity, absolute blue magnitude and metallicity as the observations. This agreement is contingent on the presence of a realistic mass-metallicity relation, and Milky-Way-like dust. SMC-like dust results in far too red a UV continuum slope. On the whole, the agreement between the simulated and observed galaxies is impressive considering that the simulations have not been fit to agree with the observations, and we conclude that the simulations provide a realistic replication of the real universe. The simulations are used to study the performance of star-formation indicators in the presence of dust. The far-infrared luminosity is found to be reliable. In contrast, the Ha and far-ultraviolet luminosities suffer severely from dust attenuation, and dust corrections can only partially remedy the situation.

Ohio High School Biology Teachers' Views of State Standard for Evolution: Impacts on Practice

ERIC Educational Resources Information Center

Borgerding, Lisa A.

2012-01-01

High school biology teachers face many challenges as they teach evolution. State standards for evolution may provide support for sound evolution instruction. This study attempts to build upon previous work by investigating teachers' views of evolution standards and their evolution practices in a state where evolution standards have been…

Teaching and Learning Evolution: Testing the Principles of a Constructivist Approach through Action Research

ERIC Educational Resources Information Center

Oliver, Mary

2011-01-01

A tenth grade class in an international school studied evolution for four weeks as part of the study of Biology. A diagnostic test was used to determine the main misconceptions students have as they come to the study of evolution. This was followed by a series of explorations of different conceptual models to account for evolution, structured…

Evolution and personal religious belief: Christian biology-related majors' search for reconciliation at a Christian university

NASA Astrophysics Data System (ADS)

Winslow, Mark William

The goal of this study was to explore how Christian biology-related majors at a Christian university perceive the apparent conflicts between their understanding of evolution and their religious beliefs, and how their faith, as a structural-developmental system for ordering and making meaning of the world, plays a role in the mediating process. This naturalistic study utilized a case study design of 15 participants specified as undergraduate biology-related majors or recent biology-related graduates from a midwestern Christian university who had completed an upper-level course on evolution. Data were collected through semi-structured interviews that investigated participants' faith and their views on creationism and evolution. Fowler's theory of faith development and Parks' model of college students' faith was extensively used. Additional data were collected through an Evolution Attitudes Survey and a position paper on evolution as an assignment in the evolution course. Data analysis revealed patterns that were organized into themes and sub-themes that were the major outcomes of the study. Most participants were raised to believe in creationism, but came to accept evolution through an extended process of evaluating the scientific evidence in support of evolution, negotiating the literalness of Genesis, recognizing evolution as a non-salvation issue, and observing professors as role models of Christians who accept evolution. Participants remained committed to their personal religious beliefs despite apprehension that accompanied the reconciliation process in accepting evolution. Most participants operated from the perspective that science and religion are separate and interacting domains. Faith played an important role in how participants reconciled their understanding of evolution and their personal religious beliefs. Participants who operated in conventional faith dismissed contentious issues or collapsed dichotomies in an effort to avoid ambiguity and perceived tensions. Participants who operated in young adult and adult faith tended to confront their perceived tensions and worked towards reconciling their understanding of evolution and their personal religious beliefs. The rich description of this naturalistic study lends heuristic insight to researchers and educators seeking an understanding of the complex processes by which Christian biology-related majors approach learning about evolution and seek reconciliation between their understanding of evolution and their personal religious beliefs.

Networks of lexical borrowing and lateral gene transfer in language and genome evolution

PubMed Central

List, Johann-Mattis; Nelson-Sathi, Shijulal; Geisler, Hans; Martin, William

2014-01-01

Like biological species, languages change over time. As noted by Darwin, there are many parallels between language evolution and biological evolution. Insights into these parallels have also undergone change in the past 150 years. Just like genes, words change over time, and language evolution can be likened to genome evolution accordingly, but what kind of evolution? There are fundamental differences between eukaryotic and prokaryotic evolution. In the former, natural variation entails the gradual accumulation of minor mutations in alleles. In the latter, lateral gene transfer is an integral mechanism of natural variation. The study of language evolution using biological methods has attracted much interest of late, most approaches focusing on language tree construction. These approaches may underestimate the important role that borrowing plays in language evolution. Network approaches that were originally designed to study lateral gene transfer may provide more realistic insights into the complexities of language evolution. PMID:24375688

High School Students' Perceptions of Evolution Instruction: Acceptance and Evolution Learning Experiences

ERIC Educational Resources Information Center

Donnelly, Lisa A.; Kazempour, Mahsa; Amirshokoohi, Aidin

2009-01-01

Evolution is an important and sometimes controversial component of high school biology. In this study, we used a mixed methods approach to explore students' evolution acceptance and views of evolution teaching and learning. Students explained their acceptance and rejection of evolution in terms of evidence and conflicts with religion and…

Prospects for the Study of Evolution in the Deep Biosphere

PubMed Central

Biddle, Jennifer F.; Sylvan, Jason B.; Brazelton, William J.; Tully, Benjamin J.; Edwards, Katrina J.; Moyer, Craig L.; Heidelberg, John F.; Nelson, William C.

2012-01-01

Since the days of Darwin, scientists have used the framework of the theory of evolution to explore the interconnectedness of life on Earth and adaptation of organisms to the ever-changing environment. The advent of molecular biology has advanced and accelerated the study of evolution by allowing direct examination of the genetic material that ultimately determines the phenotypes upon which selection acts. The study of evolution has been furthered through examination of microbial evolution, with large population numbers, short generation times, and easily extractable DNA. Such work has spawned the study of microbial biogeography, with the realization that concepts developed in population genetics may be applicable to microbial genomes (Martiny et al., 2006; Manhes and Velicer, 2011). Microbial biogeography and adaptation has been examined in many different environments. Here we argue that the deep biosphere is a unique environment for the study of evolution and list specific factors that can be considered and where the studies may be performed. This publication is the result of the NSF-funded Center for Dark Energy Biosphere Investigations (C-DEBI) theme team on Evolution (www.darkenergybiosphere.org). PMID:22319515

Prospects for the study of evolution in the deep biosphere.

PubMed

Biddle, Jennifer F; Sylvan, Jason B; Brazelton, William J; Tully, Benjamin J; Edwards, Katrina J; Moyer, Craig L; Heidelberg, John F; Nelson, William C

2011-01-01

Since the days of Darwin, scientists have used the framework of the theory of evolution to explore the interconnectedness of life on Earth and adaptation of organisms to the ever-changing environment. The advent of molecular biology has advanced and accelerated the study of evolution by allowing direct examination of the genetic material that ultimately determines the phenotypes upon which selection acts. The study of evolution has been furthered through examination of microbial evolution, with large population numbers, short generation times, and easily extractable DNA. Such work has spawned the study of microbial biogeography, with the realization that concepts developed in population genetics may be applicable to microbial genomes (Martiny et al., 2006; Manhes and Velicer, 2011). Microbial biogeography and adaptation has been examined in many different environments. Here we argue that the deep biosphere is a unique environment for the study of evolution and list specific factors that can be considered and where the studies may be performed. This publication is the result of the NSF-funded Center for Dark Energy Biosphere Investigations (C-DEBI) theme team on Evolution (www.darkenergybiosphere.org).

Clergy Views on Evolution, Creationism, Science, and Religion

ERIC Educational Resources Information Center

Colburn, Alan; Henriques, Laura

2006-01-01

Spurred by students who felt conflicted accepting evolution and the tenets of their faiths, yet knowing their faiths supported science and evolution, we began a study to determine the views clergy espouse on issues related to evolution, creationism, science, and religion. The resulting study included structured interviews with eight clergy and a…

Evolution of helping and harming in heterogeneous groups.

PubMed

Rodrigues, António M M; Gardner, Andy

2013-08-01

Social groups are often composed of individuals who differ in many respects. Theoretical studies on the evolution of helping and harming behaviors have largely focused upon genetic differences between individuals. However, nongenetic variation between group members is widespread in natural populations, and may mediate differences in individuals' social behavior. Here, we develop a framework to study how variation in individual quality mediates the evolution of unconditional and conditional social traits. We investigate the scope for the evolution of social traits that are conditional on the quality of the actor and/or recipients. We find that asymmetries in individual quality can lead to the evolution of plastic traits with different individuals expressing helping and harming traits within the same group. In this context, population viscosity can mediate the evolution of social traits, and local competition can promote both helping and harming behaviors. Furthermore, asymmetries in individual quality can lead to the evolution of competition-like traits between clonal individuals. Overall, we highlight the importance of asymmetries in individual quality, including differences in reproductive value and the ability to engage in successful social interactions, in mediating the evolution of helping and harming behaviors. © 2013 The Author(s). Evolution © 2013 The Society for the Study of Evolution.

Niche evolution and diversification in a Neotropical radiation of birds (Aves: Furnariidae).

PubMed

Seeholzer, Glenn F; Claramunt, Santiago; Brumfield, Robb T

2017-03-01

Rapid diversification may be caused by ecological adaptive radiation via niche divergence. In this model, speciation is coupled with niche divergence and lineage diversification is predicted to be correlated with rates of niche evolution. Studies of the role of niche evolution in diversification have generally focused on ecomorphological diversification but climatic-niche evolution may also be important. We tested these alternatives using a phylogeny of 298 species of ovenbirds (Aves: Furnariidae). We found that within Furnariidae, variation in species richness and diversification rates of subclades were best predicted by rate of climatic-niche evolution than ecomorphological evolution. Although both are clearly important, univariate regression and multivariate model averaging more consistently supported the climatic-niche as the best predictor of lineage diversification. Our study adds to the growing body of evidence, suggesting that climatic-niche divergence may be an important driver of rapid diversification in addition to ecomorphological evolution. However, this pattern may depend on the phylogenetic scale at which rate heterogeneity is examined. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

The functional basis of adaptive evolution in chemostats.

PubMed

Gresham, David; Hong, Jungeui

2015-01-01

Two of the central problems in biology are determining the molecular basis of adaptive evolution and understanding how cells regulate their growth. The chemostat is a device for culturing cells that provides great utility in tackling both of these problems: it enables precise control of the selective pressure under which organisms evolve and it facilitates experimental control of cell growth rate. The aim of this review is to synthesize results from studies of the functional basis of adaptive evolution in long-term chemostat selections using Escherichia coli and Saccharomyces cerevisiae. We describe the principle of the chemostat, provide a summary of studies of experimental evolution in chemostats, and use these studies to assess our current understanding of selection in the chemostat. Functional studies of adaptive evolution in chemostats provide a unique means of interrogating the genetic networks that control cell growth, which complements functional genomic approaches and quantitative trait loci (QTL) mapping in natural populations. An integrated approach to the study of adaptive evolution that accounts for both molecular function and evolutionary processes is critical to advancing our understanding of evolution. By renewing efforts to integrate these two research programs, experimental evolution in chemostats is ideally suited to extending the functional synthesis to the study of genetic networks. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permission@oup.com.

Alleles versus mutations: Understanding the evolution of genetic architecture requires a molecular perspective on allelic origins.

PubMed

Remington, David L

2015-12-01

Perspectives on the role of large-effect quantitative trait loci (QTL) in the evolution of complex traits have shifted back and forth over the past few decades. Different sets of studies have produced contradictory insights on the evolution of genetic architecture. I argue that much of the confusion results from a failure to distinguish mutational and allelic effects, a limitation of using the Fisherian model of adaptive evolution as the lens through which the evolution of adaptive variation is examined. A molecular-based perspective reveals that allelic differences can involve the cumulative effects of many mutations plus intragenic recombination, a model that is supported by extensive empirical evidence. I discuss how different selection regimes could produce very different architectures of allelic effects under a molecular-based model, which may explain conflicting insights on genetic architecture from studies of variation within populations versus between divergently selected populations. I address shortcomings of genome-wide association study (GWAS) practices in light of more suitable models of allelic evolution, and suggest alternate GWAS strategies to generate more valid inferences about genetic architecture. Finally, I discuss how adopting more suitable models of allelic evolution could help redirect research on complex trait evolution toward addressing more meaningful questions in evolutionary biology. © 2015 The Author(s). Evolution © 2015 The Society for the Study of Evolution.

Archaeological data reveal slow rates of evolution during plant domestication.

PubMed

Purugganan, Michael D; Fuller, Dorian Q

2011-01-01

Domestication is an evolutionary process of species divergence in which morphological and physiological changes result from the cultivation/tending of plant or animal species by a mutualistic partner, most prominently humans. Darwin used domestication as an analogy to evolution by natural selection although there is strong debate on whether this process of species evolution by human association is an appropriate model for evolutionary study. There is a presumption that selection under domestication is strong and most models assume rapid evolution of cultivated species. Using archaeological data for 11 species from 60 archaeological sites, we measure rates of evolution in two plant domestication traits--nonshattering and grain/seed size increase. Contrary to previous assumptions, we find the rates of phenotypic evolution during domestication are slow, and significantly lower or comparable to those observed among wild species subjected to natural selection. Our study indicates that the magnitudes of the rates of evolution during the domestication process, including the strength of selection, may be similar to those measured for wild species. This suggests that domestication may be driven by unconscious selection pressures similar to that observed for natural selection, and the study of the domestication process may indeed prove to be a valid model for the study of evolutionary change. © 2010 The Author(s). Evolution© 2010 The Society for the Study of Evolution.

The effect of sex on the repeatability of evolution in different environments.

PubMed

Lachapelle, Josianne; Colegrave, Nick

2017-04-01

The adaptive function of sex has been extensively studied, while less consideration has been given to the potential downstream consequences of sex on evolution. Here, we investigate one such potential consequence, the effect of sex on the repeatability of evolution. By affecting the repeatability of evolution, sex could have important implications for biodiversity, and for our ability to make predictions about the outcome of environmental change. We allowed asexual and sexual populations of Chlamydomonas reinhardtii to evolve in novel environments and monitored both their change in fitness and variance in fitness after evolution. Sex affected the repeatability of evolution by changing the importance of the effect of selection, chance, and ancestral constraints on the outcome of the evolutionary process. In particular, the effects of sex were highly dependent on the initial genetic composition of the population and on the environment. Given the lack of a consistent effect of sex on repeatability across the environments used here, further studies to dissect in more detail the underlying reasons for these differences as well as studies in additional environments are required if we are to have a general understanding of the effects of sex on the repeatability of evolution. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

Dynamical Evolution of Ring-Satellite Systems

NASA Technical Reports Server (NTRS)

Ohtsuki, Keiji

2005-01-01

The goal of this research was to understand dynamical processes related to the evolution of size distribution of particles in planetary rings and application of theoretical results to explain features in the present rings of giant planets. We studied velocity evolution and accretion rates of ring particles in the Roche zone. We developed a new numerical code for the evolution of ring particle size distribution, which takes into account the above results for particle velocity evolution and accretion rates. We also studied radial diffusion rate of ring particles due to inelastic collisions and gravitational encounters. Many of these results can be also applied to dynamical evolution of a planetesimal disk. Finally, we studied rotation rates of moonlets and particles in planetary rings, which would influence the accretional evolution of these bodies. We describe our key accomplishments during the past three years in more detail in the following.

Sexual selection expedites the evolution of pesticide resistance.

PubMed

Jacomb, Frances; Marsh, Jason; Holman, Luke

2016-12-01

The evolution of insecticide resistance by crop pests and disease vectors causes serious problems for agriculture and health. Sexual selection can accelerate or hinder adaptation to abiotic challenges in a variety of ways, but the effect of sexual selection on resistance evolution is little studied. Here, we examine this question using experimental evolution in the pest insect Tribolium castaneum. The experimental removal of sexual selection slowed the evolution of resistance in populations treated with pyrethroid pesticide, and also reduced the rate at which resistance was lost from pesticide-free populations. These results suggest that selection arising from variance in mating and fertilization success can augment natural selection on pesticide resistance, meaning that sexual selection should be considered when designing strategies to limit the evolution of pesticide resistance. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

The Dense Molecular Gas and Nuclear Activity in the ULIRG IRAS 13120-5453

NASA Astrophysics Data System (ADS)

Privon, G. C.; Aalto, S.; Falstad, N.; Muller, S.; González-Alfonso, E.; Sliwa, K.; Treister, E.; Costagliola, F.; Armus, L.; Evans, A. S.; Garcia-Burillo, S.; Izumi, T.; Sakamoto, K.; van der Werf, P.; Chu, J. K.

2017-02-01

We present new Atacama Large Millimeter/submillimeter Array Band 7 (˜340 GHz) observations of the dense gas tracers HCN, HCO+, and CS in the local, single-nucleus, ultraluminous infrared galaxy IRAS 13120-5453. We find centrally enhanced HCN (4-3) emission, relative to HCO+ (4-3), but do not find evidence for radiative pumping of HCN. Considering the size of the starburst (0.5 kpc) and the estimated supernovae rate of ˜1.2 yr-1, the high HCN/HCO+ ratio can be explained by an enhanced HCN abundance as a result of mechanical heating by the supernovae, though the active galactic nucleus and winds may also contribute additional mechanical heating. The starburst size implies a high ΣIR of 4.7 × 1012 L ⊙ kpc-2, slightly below predictions of radiation-pressure limited starbursts. The HCN line profile has low-level wings, which we tentatively interpret as evidence for outflowing dense molecular gas. However, the dense molecular outflow seen in the HCN line wings is unlikely to escape the Galaxy and is destined to return to the nucleus and fuel future star formation. We also present modeling of Herschel observations of the H2O lines and find a nuclear dust temperature of ˜40 K. IRAS 13120-5453 has a lower dust temperature and ΣIR than is inferred for the systems termed “compact obscured nuclei (CONs)” (such as Arp 220 and Mrk 231). If IRAS 13120-5453 has undergone a CON phase, we are likely witnessing it at a time when the feedback has already inflated the nuclear ISM and diluted star formation in the starburst/active galactic nucleus core.

Submillimetre observations of WISE-selected high-redshift, luminous, dusty galaxies

NASA Astrophysics Data System (ADS)

Jones, Suzy F.; Blain, Andrew W.; Stern, Daniel; Assef, Roberto J.; Bridge, Carrie R.; Eisenhardt, Peter; Petty, Sara; Wu, Jingwen; Tsai, Chao-Wei; Cutri, Roc; Wright, Edward L.; Yan, Lin

2014-09-01

We present SCUBA-2 (Submillimetre Common-User Bolometer Array) 850 μm submillimetre (submm) observations of the fields of 10 dusty, luminous galaxies at z ˜ 1.7-4.6, detected at 12 and/or 22 μm by the Wide-field Infrared Survey Explorer (WISE) all-sky survey, but faint or undetected at 3.4 and 4.6 μm; dubbed hot, dust-obscured galaxies (Hot DOGs). The six detected targets all have total infrared luminosities greater than 1013 L⊙, with one greater than 1014 L⊙. Their spectral energy distributions (SEDs) are very blue from mid-infrared to submm wavelengths and not well fitted by standard active galactic nuclei (AGN) SED templates, without adding extra dust extinction to fit the WISE 3.4 and 4.6 μm data. The SCUBA-2 850 μm observations confirm that the Hot DOGs have less cold and/or more warm dust emission than standard AGN templates, and limit an underlying extended spiral or ULIRG-type galaxy to contribute less than about 2 or 55 per cent of the typical total Hot DOG IR luminosity, respectively. The two most distant and luminous targets have similar observed submm to mid-infrared ratios to the rest, and thus appear to have even hotter SEDs. The number of serendipitous submm galaxies detected in the 1.5-arcmin-radius SCUBA-2 850 μm maps indicates there is a significant overdensity of serendipitous sources around Hot DOGs. These submm observations confirm that the WISE-selected ultraluminous galaxies have very blue mid-infrared to submm SEDs, suggesting that they contain very powerful AGN, and are apparently located in unusual arcmin-scale overdensities of very luminous dusty galaxies.

THE MULTIPHASE STRUCTURE AND POWER SOURCES OF GALACTIC WINDS IN MAJOR MERGERS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rupke, David S. N.; Veilleux, Sylvain, E-mail: drupke@gmail.com

2013-05-01

Massive, galaxy-scale outflows are known to be ubiquitous in major mergers of disk galaxies in the local universe. In this paper, we explore the multiphase structure and power sources of galactic winds in six ultraluminous infrared galaxies (ULIRGs) at z < 0.06 using deep integral field spectroscopy with the Gemini Multi-Object Spectrograph (GMOS) on Gemini North. We probe the neutral, ionized, and dusty gas phases using Na I D, strong emission lines ([O I], H{alpha}, and [N II]), and continuum colors, respectively. We separate outflow motions from those due to rotation and tidal perturbations, and find that all of themore » galaxies in our sample host high-velocity flows on kiloparsec scales. The properties of these outflows are consistent with multiphase (ionized, neutral, and dusty) collimated bipolar winds emerging along the minor axis of the nuclear disk to scales of 1-2 kpc. In two cases, these collimated winds take the form of bipolar superbubbles, identified by clear kinematic signatures. Less collimated (but still high-velocity) flows are also present on scales up to 5 kpc in most systems. The three galaxies in our sample with obscured QSOs host higher velocity outflows than those in the three galaxies with no evidence for an active galactic nucleus. The peak outflow velocity in each of the QSOs is in the range 1450-3350 km s{sup -1}, and the highest velocities (2000-3000 km s{sup -1}) are seen only in ionized gas. The outflow energy and momentum in the QSOs are difficult to produce from a starburst alone, but are consistent with the QSO contributing significantly to the driving of the flow. Finally, when all gas phases are accounted for, the outflows are massive enough to provide negative feedback to star formation.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Iono, Daisuke; Hatsukade, Bunyo; Kawabe, Ryohei

The central structure in three of the brightest unlensed z = 3–4 submillimeter galaxies is investigated through 0.″015–0.″05 (120–360 pc) 860 μ m continuum images obtained using the Atacama Large Millimeter/submillimeter Array (ALMA). The distribution in the central kiloparsec in AzTEC1 and AzTEC8 is extremely complex, and they are composed of multiple ∼200 pc clumps. AzTEC4 consists of two sources that are separated by ∼1.5 kpc, indicating a mid-stage merger. The peak star formation rate densities in the central clumps are ∼300–3000 M {sub ⊙} yr{sup −1} kpc{sup −2}, suggesting regions with extreme star formation near the Eddington limit. Bymore » comparing the flux obtained by ALMA and Submillimeter Array, we find that 68%–90% of the emission is extended (≳1 kpc) in AzTEC4 and 8. For AzTEC1, we identify at least 11 additional compact (∼200 pc) clumps in the extended 3–4 kpc region. Overall, the data presented here suggest that the luminosity surface densities observed at ≲150 pc scales are roughly similar to that observed in local ULIRGs, as in the eastern nucleus of Arp 220. Between 10% and 30% of the 860 μ m continuum is concentrated in clumpy structures in the central kiloparsec, while the remaining flux is distributed over ≳1 kpc regions, some of which could also be clumpy. These sources can be explained by a rapid inflow of gas such as a merger of gas-rich galaxies, surrounded by extended and clumpy starbursts. However, the cold mode accretion model is not ruled out.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Aravena, M.; Wagg, J.; Papadopoulos, P. P.

We report the detection of the {sup 12}CO J = 1-0 emission line in [H89]1821+643, one of the most optically luminous quasi-stellar objects (QSOs) in the local universe, and a template ULIRG-to-QSO transition object, located in a rich, cool-core cluster at z = 0.297. The CO emission is likely to be extended, highly asymmetric with respect to the center of the host elliptical where the QSO resides, and correspond with a molecular gas mass of {approx}8.0 x 10{sup 9} M{sub sun}. The dynamical mass enclosed by the CO emission-line region could amount to {approx}1.7 x 10{sup 12} M{sub sun} (80%more » of the total mass of the elliptical host). The bulk of the CO emission is located at {approx}9 kpc southeast from the nuclei position, close to a faint optical structure, suggesting that the CO emission could either represent a gas-rich companion galaxy merging with the elliptical host or a tail-like structure reminiscent of a previous interaction. We argue that the first scenario is more likely given the large masses implied by the CO source, which would imply a highly asymmetric elliptical host. The close alignment between the CO emission's major axis and the radio plume suggests a possible role in the excitation of the ambient gas reservoir by the latter. The stacking technique was used to search for CO emission and 3-mm continuum emission from galaxies in the surrounding cluster. However, no detection was found toward individual galaxies or the stacked ensemble of galaxies, with a 3{sigma} limit of <1.1 x 10{sup 9} M{sub sun} for the molecular gas.« less

ALMA Pinpoints a Strong Overdensity of U/LIRGs in the Massive Cluster XCS J2215 at z = 1.46

NASA Astrophysics Data System (ADS)

Stach, Stuart M.; Swinbank, A. M.; Smail, Ian; Hilton, Matt; Simpson, J. M.; Cooke, E. A.

2017-11-01

We surveyed the core regions of the z = 1.46 cluster XCS J2215.9-1738 with the Atacama Large Millimeter Array (ALMA) and the MUSE-GALACSI spectrograph on the Very Large Telescope (VLT). We obtained high spatial resolution observations with ALMA of the 1.2 mm dust continuum and molecular gas emission in the central regions of the cluster. These observations detect 14 significant millimeter sources in a region with a projected diameter of just ˜500 kpc (˜1‧). For six of these galaxies, we also obtain 12CO(2-1) and 12CO(5-4) line detections, confirming them as cluster members, and a further five of our millimeter galaxies have archival 12CO(2-1) detections, which also place them in the cluster. An additional two millimeter galaxies have photometric redshifts consistent with cluster membership, although neither show strong line emission in the MUSE spectra. This suggests that the bulk (≥11/14, ˜80%) of the submillimeter sources in the field are in fact luminous infrared galaxies lying within this young cluster. We then use our sensitive new observations to constrain the dust-obscured star formation activity and cold molecular gas within this cluster. We find hints that the cooler dust and gas components within these galaxies may have been influenced by their environment, reducing the gas reservoir available for their subsequent star formation. We also find that these actively star-forming galaxies have dynamical masses and stellar population ages expected for the progenitors of massive, early-type galaxies in local clusters, potentially linking these populations.

CONNECTING GRBs AND ULIRGs: A SENSITIVE, UNBIASED SURVEY FOR RADIO EMISSION FROM GAMMA-RAY BURST HOST GALAXIES AT 0 < z < 2.5

DOE Office of Scientific and Technical Information (OSTI.GOV)

Perley, D. A.; Perley, R. A.; Hjorth, J.

2015-03-10

Luminous infrared galaxies and submillimeter galaxies contribute significantly to stellar mass assembly and provide an important test of the connection between the gamma-ray burst (GRB) rate and that of overall cosmic star formation. We present sensitive 3 GHz radio observations using the Karl G. Jansky Very Large Array of 32 uniformly selected GRB host galaxies spanning a redshift range from 0 < z < 2.5, providing the first fully dust- and sample-unbiased measurement of the fraction of GRBs originating from the universe's most bolometrically luminous galaxies. Four galaxies are detected, with inferred radio star formation rates (SFRs) ranging between 50 and 300 Mmore » {sub ☉} yr{sup –1}. Three of the four detections correspond to events consistent with being optically obscured 'dark' bursts. Our overall detection fraction implies that between 9% and 23% of GRBs between 0.5 < z < 2.5 occur in galaxies with S {sub 3GHz} > 10 μJy, corresponding to SFR > 50 M {sub ☉} yr{sup –1} at z ∼ 1 or >250 M {sub ☉} yr{sup –1} at z ∼ 2. Similar galaxies contribute approximately 10%-30% of all cosmic star formation, so our results are consistent with a GRB rate that is not strongly biased with respect to the total SFR of a galaxy. However, all four radio-detected hosts have stellar masses significantly lower than IR/submillimeter-selected field galaxies of similar luminosities. We suggest that the GRB rate may be suppressed in metal-rich environments but independently enhanced in intense starbursts, producing a strong efficiency dependence on mass but little net dependence on bulk galaxy SFR.« less

Factors which influence Texas biology teachers' decisions to emphasize fundamental concepts of evolution

NASA Astrophysics Data System (ADS)

Bilica, Kimberly Lynn

The teaching of biological evolution in public science classrooms has been mitigated by a lingering and historic climate of controversy (Skoog, 1984; Skoog, 1979). This controversy has successfully stalled attempts to bring authentic science literacy to the American public (Bybee, 1997). The first encouraging signs of the abatement of this controversy occurred during the early 1990s when several prominent science organizations promoted evolution to its appropriate status as a central and unifying concept in biology (National Science Teachers Association, 1992; National Research Council, 1996; American Association for the Advancement of Science, 1990, 1993). The organizations acknowledged that not only should biological evolution be taught, evolution should stand as one of a select group of essential concepts upon which biology curricula should be built. Bandura's Social Learning theory (Bandura, 1997; Lumpe, Haney, & Czerniak, 2000) and Helms' Model of Identity (Helms, 1998) provide the theoretical basis for this study. Both Bandura and Helms explain the actions of teachers by examining the beliefs and values that influence their decisions. The models distinguish between two types of belief systems: capacity beliefs and context beliefs (Lumpe, et al, 2000; Helms, 1998). Both belief types influence and are influenced by individual actions. In this study, the action to be described is the decision that teachers make about the degree of emphasis on evolution in the classroom. The capacity beliefs that will be examined are teachers' beliefs about their capability to teach evolution. The contextual beliefs in this study are perceptions about students' capabilities to learn evolution, the status of evolution in science, the place of evolution in the biology classroom, the influence of textbooks, time, and community/school values. This study contributes to and extends the knowledge base established by studies of evolution education by exploring the relative amount of emphasis that Texas biology teachers currently as well as prefer to place on fundamental evolution concepts in relationship to specific belief factors which influence biology teachers' curricular decisions.

Toxin structures as evolutionary tools: Using conserved 3D folds to study the evolution of rapidly evolving peptides.

PubMed

Undheim, Eivind A B; Mobli, Mehdi; King, Glenn F

2016-06-01

Three-dimensional (3D) structures have been used to explore the evolution of proteins for decades, yet they have rarely been utilized to study the molecular evolution of peptides. Here, we highlight areas in which 3D structures can be particularly useful for studying the molecular evolution of peptide toxins. Although we focus our discussion on animal toxins, including one of the most widespread disulfide-rich peptide folds known, the inhibitor cystine knot, our conclusions should be widely applicable to studies of the evolution of disulfide-constrained peptides. We show that conserved 3D folds can be used to identify evolutionary links and test hypotheses regarding the evolutionary origin of peptides with extremely low sequence identity; construct accurate multiple sequence alignments; and better understand the evolutionary forces that drive the molecular evolution of peptides. Also watch the video abstract. © 2016 WILEY Periodicals, Inc.

Dynamical Models of Elliptical Galaxies in z=0.5 Clusters. II. Mass-to-Light Ratio Evolution without Fundamental Plane Assumptions

NASA Astrophysics Data System (ADS)

van der Marel, Roeland P.; van Dokkum, Pieter G.

2007-10-01

We study the mass-to-light ratio (M/L) evolution of early-type galaxies using dynamical modeling of resolved internal kinematics. This makes fewer assumptions than fundamental plane (FP) studies and provides a powerful new approach for studying galaxy evolution. We focus on the sample of 25 galaxies in clusters at z~0.5 modeled in Paper I. For comparison, we compile and homogenize M/L literature data for 60 nearby galaxies that were modeled in comparable detail. The nearby sample obeys log(M/L)B=Z+Slog(σeff/200 km s-1), where Z=0.896+/-0.010, S=0.992+/-0.054, and σeff is the effective velocity dispersion. The z~0.5 sample follows a similar relation, but with lower zero point. The implied M/L evolution is Δlog(M/L)/Δz=-0.457+/-0.046(random)+/-0.078(systematic), consistent with passive evolution following high-redshift formation. This agrees with the FP results for this sample by van Dokkum & van der Marel, and confirms that FP evolution tracks M/L evolution, which is an important verification of the assumptions that underlie FP studies. However, while we find more FP evolution for galaxies of low σeff (or low mass), the dynamical M/L evolution shows little correlation with σeff. We argue that this difference can be plausibly attributed to a combination of two effects: (1) evolution in structural galaxy properties other than M/L, and (2) the neglect of rotational support in studies of FP evolution. The results leave the question open as to whether the low-mass galaxies in the sample have younger populations than the high-mass galaxies. This highlights the general importance in the study of population ages for complementing dynamical measurements with broadband colors or spectroscopic population diagnostics.

Three Decades of Anti-evolution Campaign and its Results: Turkish Undergraduates' Acceptance and Understanding of the Biological Evolution Theory

NASA Astrophysics Data System (ADS)

Peker, Deniz; Comert, Gulsum Gul; Kence, Aykut

2010-06-01

Even though in the early years of the Republic of Turkey Darwin’s theory of evolution was treated as a scientific theory and taught fairly in schools, despite all the substantial evidence accumulated supporting the theory of evolution since then, Darwin and his ideas today have been scorned by curriculum and education policy makers. Furthermore, Turkish students and academics have been faced with unprecedented creationist propaganda for many years. In this paper, we first provide a glimpse of the theory of evolution and creationism in Turkey, we then report the results of our survey study ( N = 1,098) about the undergraduates’ acceptance and understanding of Darwinian evolution and some of the socioeconomic variables affecting those measures. Our cross sectional study shows that acceptance and understanding of the theory of evolution is quite low. We criticize the current state of evolution education in Turkey and call for a change towards a scientific treatment of the theory evolution in schools.

Rapidity evolution of gluon TMD from low to moderate x

DOE PAGES

Balitsky, Ian; Tarasov, A.

2015-10-05

In this article, we study how the rapidity evolution of gluon transverse momentum dependent distribution changes from nonlinear evolution at smallmore » $$x \\ll 1$$ to linear evolution at moderate $$x \\sim 1$$.« less

Teaching Evolution: A Heuristic Study of Personal and Cultural Dissonance

NASA Astrophysics Data System (ADS)

Grimes, Larry G.

Darwinian evolution is a robustly supported scientific theory. Yet creationists continue to challenge its teaching in American public schools. Biology teachers in all 50 states are responsible for teaching science content standards that include evolution. As products of their backgrounds and affiliations teachers bring personal attitudes and beliefs to their teaching. The purpose of this study was to explore how biology teachers perceive, describe, and value their teaching of evolution. This research question was explored through a heuristic qualitative methodology. Eight veteran California high school biology teachers were queried as to their beliefs, perceptions, experiences and practices of teaching evolution. Both personal and professional documents were collected. Data was presented in the form of biographical essays that highlight teachers' backgrounds, experiences, perspectives and practices of teaching evolution. Of special interest was how they describe pressure over teaching evolution during a decade of standards and No Child Left Behind high-stakes testing mandates. Five common themes emerged. Standards have increased the overall amount of evolution that is taught. High-stakes testing has decreased the depth at which evolution is taught. Teacher belief systems strongly influence how evolution is taught. Fear of creationist challenges effect evolution teaching strategies. And lastly, concern over the potential effects of teaching evolution on student worldviews was mixed. Three categories of teacher concern over the potential impact of evolution on student worldviews were identified: Concerned, Strategist, and Carefree. In the final analysis teacher beliefs and attitudes still appeared to he the most important factor influencing how evolution is taught.

Continuous "in vitro" Evolution of a Ribozyme Ligase: A Model Experiment for the Evolution of a Biomolecule

ERIC Educational Resources Information Center

Ledbetter, Michael P.; Hwang, Tony W.; Stovall, Gwendolyn M.; Ellington, Andrew D.

2013-01-01

Evolution is a defining criterion of life and is central to understanding biological systems. However, the timescale of evolutionary shifts in phenotype limits most classroom evolution experiments to simple probability simulations. "In vitro" directed evolution (IVDE) frequently serves as a model system for the study of Darwinian…

The Effect of Contextual Material on Evolution in the Jordanian Secondary-School Curriculum on Students' Acceptance of the Theory of Evolution

ERIC Educational Resources Information Center

De Baz, Theodora; El-Weher, Mahmoud

2012-01-01

The purpose of this study was to detect the extent to which contextual material of a unit on "The origin and evolution of living organisms" included in the high-school biology curriculum in Jordan affected students' acceptance of the theory of evolution. The participants of this study consisted of 107 tenth-grade students randomly drawn…

Correlated evolution of body and fin morphology in the cichlid fishes.

PubMed

Feilich, Kara L

2016-10-01

Body and fin shapes are chief determinants of swimming performance in fishes. Different configurations of body and fin shapes can suit different locomotor specializations. The success of any configuration is dependent upon the hydrodynamic interactions between body and fins. Despite the importance of body-fin interactions for swimming, there are few data indicating whether body and fin configurations evolve in concert, or whether these structures vary independently. The cichlid fishes are a diverse family whose well-studied phylogenetic relationships make them ideal for the study of macroevolution of ecomorphology. This study measured body, and caudal and median fin morphology from radiographs of 131 cichlid genera, using morphometrics and phylogenetic comparative methods to determine whether these traits exhibit correlated evolution. Partial least squares canonical analysis revealed that body, caudal fin, dorsal fin, and anal fin shapes all exhibited strong correlated evolution consistent with locomotor ecomorphology. Major patterns included the evolution of deep body profiles with long fins, suggestive of maneuvering specialization; and the evolution of narrow, elongate caudal peduncles with concave tails, a combination that characterizes economical cruisers. These results demonstrate that body shape evolution does not occur independently of other traits, but among a suite of other morphological changes that augment locomotor specialization. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

Three Southern high school biology teachers' perspectives on teaching evolution: Sociocultural influences

NASA Astrophysics Data System (ADS)

Kyzer, Peggy Mckewen

Organizations in science and science education call for students to have a thorough understanding of the theory of evolution. Yet many high school biology teachers do not teach evolution and/or include creationism in their instruction (National Academy of Science, 1998). Historically, the controversy surrounding evolution has created tension for teachers. This case study explored the sociocultural influences related to teaching evolution in three Southern 10th-grade public high school biology classrooms. It also explored the socially and culturally embedded influences on teachers' instructional goals and personal perspectives toward evolution as well as modification of instruction when evolution is taught. Theoretically framed using symbolic interactionism and sociocultural theory, data were collected between October 2003 and April 2004 and included classroom observations two to three times per week, artifacts, and in-depth interviews of the participating teachers, their science department chairpersons, their students, and a Protestant minister. The classroom teachers were unaware of the focus of the study until after evolution was taught. The analysis used in this study was an inductive, interpretative approach that allowed exploration of the sociocultural influences that affect how teachers teach evolution. The sociocultural influences and the lived experiences of each teacher created a continuum for teaching evolution. One of the participating teachers who was heavily involved in the community and one of its fundamentalist churches elected to avoid teaching evolution. Another participating teacher at the same school integrated the theory of evolution in every unit. The third teacher who taught in another school elected to teach evolution in a superficial manner to avoid conflict. The data revealed that the participating teachers' sociocultural situatedness influenced their decisions and instruction on evolution. The influence of strong religious beliefs within the Southern culture was a theme that cut across all the teachers' decisions. In particular, religious beliefs made teaching human evolution difficult. Other recurring themes included the influence of the textbook and factors that served as escape routes for the teachers electing to avoid evolution. The escape routes included the pressure of time, the mixed messages from the state board of education, and the double-edged sword of teacher autonomy.

College students' use of science content during socioscientific issues negotiation: Impact of evolution understanding and acceptance

NASA Astrophysics Data System (ADS)

Fowler, Samantha R.

The purpose of this study was to explore the evolution science content used during college students' negotiation of biology-based socioscientific issues (SSI) and examine how it related to students' conceptual understanding and acceptance of biological evolution. Specific research questions were, (1a) what specific evolutionary science content do college students evoke during SSI negotiation, (1b) what is the depth of the evolutionary science content reflected in college students. SSI negotiation, and (2) what is the nature of the interaction between evolution understanding and evolution acceptance as they relate to depth of use of evolution content during SSI negotiation? The Socioscientific Issues Questionnaire (SSI-Q) was developed using inductive data analysis to examine science content use and to develop a rubric for measuring depth of evolutionary science content use during SSI negotiation. Sixty upper level undergraduate biology and non-biology majors completed the SSI-Q and also the Conceptual Inventory of Natural Selection (CINS: Anderson, Fisher, & Norman, 2002) to measure evolution understanding and the Measure of Acceptance of the Theory of Evolution (MATE: Rutledge & Warden, 1999) to measure evolution acceptance. A multiple regression analysis tested for interaction effects between the predictor variables, evolution understanding and evolution acceptance. Results indicate that college students primarily use science concepts related to evolution to negotiate biology-based SSI: variation in a population, inheritance of traits, differential success, and change through time. The hypothesis that the extent of one's acceptance of evolution is a mitigating factor in how evolution content is evoked during SSI negotiation was supported by the data. This was seen in that evolution was the predominant science content used by participants for each of the three SSI scenarios used in this study and used consistently throughout the three SSI scenarios. In addition to its potential to assess aspects of argumentation, a modification of the SSI-Q could be used for further study about students' misconceptions about evolution or scientific literacy, if it is defined as one's tendency to utilize science content during a decision-making process within an SSI context.

Song evolution, speciation, and vocal learning in passerine birds.

PubMed

Mason, Nicholas A; Burns, Kevin J; Tobias, Joseph A; Claramunt, Santiago; Seddon, Nathalie; Derryberry, Elizabeth P

2017-03-01

Phenotypic divergence can promote reproductive isolation and speciation, suggesting a possible link between rates of phenotypic evolution and the tempo of speciation at multiple evolutionary scales. To date, most macroevolutionary studies of diversification have focused on morphological traits, whereas behavioral traits─including vocal signals─are rarely considered. Thus, although behavioral traits often mediate mate choice and gene flow, we have a limited understanding of how behavioral evolution contributes to diversification. Furthermore, the developmental mode by which behavioral traits are acquired may affect rates of behavioral evolution, although this hypothesis is seldom tested in a phylogenetic framework. Here, we examine evidence for rate shifts in vocal evolution and speciation across two major radiations of codistributed passerines: one oscine clade with learned songs (Thraupidae) and one suboscine clade with innate songs (Furnariidae). We find that evolutionary bursts in rates of speciation and song evolution are coincident in both thraupids and furnariids. Further, overall rates of vocal evolution are higher among taxa with learned rather than innate songs. Taken together, these findings suggest an association between macroevolutionary bursts in speciation and vocal evolution, and that the tempo of behavioral evolution can be influenced by variation in developmental modes among lineages. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

Functional pleiotropy and mating system evolution in plants: frequency-independent mating.

PubMed

Jordan, Crispin Y; Otto, Sarah P

2012-04-01

Mutations that alter the morphology of floral displays (e.g., flower size) or plant development can change multiple functions simultaneously, such as pollen export and selfing rate. Given the effect of these various traits on fitness, pleiotropy may alter the evolution of both mating systems and floral displays, two characters with high diversity among angiosperms. The influence of viability selection on mating system evolution has not been studied theoretically. We model plant mating system evolution when a single locus simultaneously affects the selfing rate, pollen export, and viability. We assume frequency-independent mating, so our model characterizes prior selfing. Pleiotropy between increased viability and selfing rate reduces opportunities for the evolution of pure outcrossing, can favor complete selfing despite high inbreeding depression, and notably, can cause the evolution of mixed mating despite very high inbreeding depression. These results highlight the importance of pleiotropy for mating system evolution and suggest that selection by nonpollinating agents may help explain mixed mating, particularly in species with very high inbreeding depression. © 2012 The Author(s). Evolution© 2012 The Society for the Study of Evolution.

Professor Attitudes and Beliefs about Teaching Evolution

NASA Astrophysics Data System (ADS)

Barnes, Maryann Elizabeth

Teaching evolution has been shown to be a challenge for faculty, in both K-12 and postsecondary education. Many of these challenges stem from perceived conflicts not only between religion and evolution, but also faculty beliefs about religion, it's compatibility with evolutionary theory, and it's proper role in classroom curriculum. Studies suggest that if educators engage with students' religious beliefs and identity, this may help students have positive attitudes towards evolution. The aim of this study was to reveal attitudes and beliefs professors have about addressing religion and providing religious scientist role models to students when teaching evolution. 15 semi-structured interviews of tenured biology professors were conducted at a large Midwestern universiy regarding their beliefs, experiences, and strategies teaching evolution and particularly, their willingness to address religion in a class section on evolution. Following a qualitative analysis of transcripts, professors did not agree on whether or not it is their job to help students accept evolution (although the majority said it is not), nor did they agree on a definition of "acceptance of evolution". Professors are willing to engage in students' religious beliefs, if this would help their students accept evolution. Finally, professors perceived many challenges to engaging students' religious beliefs in a science classroom such as the appropriateness of the material for a science class, large class sizes, and time constraints. Given the results of this study, the author concludes that instructors must come to a consensus about their goals as biology educators as well as what "acceptance of evolution" means, before they can realistically apply the engagement of student's religious beliefs and identity as an educational strategy.

Leveraging contemporary species introductions to test phylogenetic hypotheses of trait evolution.

PubMed

Lu-Irving, Patricia; Marx, Hannah E; Dlugosch, Katrina M

2018-05-10

Plant trait evolution is a topic of interest across disciplines and scales. Phylogenetic studies are powerful for generating hypotheses about the mechanisms that have shaped plant traits and their evolution. Introduced plants are a rich source of data on contemporary trait evolution. Introductions could provide especially useful tests of a variety of evolutionary hypotheses because the environments selecting on evolving traits are still present. We review phylogenetic and contemporary studies of trait evolution and identify areas of overlap and areas for further integration. Emerging tools which can promote integration include broadly focused repositories of trait data, and comparative models of trait evolution that consider both intra and interspecific variation. Copyright © 2018 Elsevier Ltd. All rights reserved.

Conceptual Ecology of the Evolution Acceptance among Greek Education Students: Knowledge, religious practices and social influences

NASA Astrophysics Data System (ADS)

Athanasiou, Kyriacos; Papadopoulou, Penelope

2012-04-01

In this study, we explored some of the factors related to the acceptance of evolution theory among Greek university students training to be teachers in early childhood education, using conceptual ecology for biological evolution as a theoretical framework. We examined the acceptance of evolution theory and we also looked into the relationship between the acceptance and parents' education level, thinking dispositions and frequency of religious practice as independent variables. Students' moderate acceptance of evolution theory is positively correlated with the frequency of religious practices and thinking dispositions. Our findings indicate that studying a controversial issue such as the acceptance of evolution theory in a multivariate fashion, using conceptual ecology as a theoretical lens to interpret the findings, is informative. They also indicate the differences that exist between societies and how socio-cultural factors such as the nature of religion, as part of the conceptual ecology, influence acceptance of evolution and have an influence on evolution education.

Evolution of viral virulence: empirical studies

USGS Publications Warehouse

Kurath, Gael; Wargo, Andrew R.

2016-01-01

The concept of virulence as a pathogen trait that can evolve in response to selection has led to a large body of virulence evolution theory developed in the 1980-1990s. Various aspects of this theory predict increased or decreased virulence in response to a complex array of selection pressures including mode of transmission, changes in host, mixed infection, vector-borne transmission, environmental changes, host vaccination, host resistance, and co-evolution of virus and host. A fundamental concept is prediction of trade-offs between the costs and benefits associated with higher virulence, leading to selection of optimal virulence levels. Through a combination of observational and experimental studies, including experimental evolution of viruses during serial passage, many of these predictions have now been explored in systems ranging from bacteriophage to viruses of plants, invertebrates, and vertebrate hosts. This chapter summarizes empirical studies of viral virulence evolution in numerous diverse systems, including the classic models myxomavirus in rabbits, Marek's disease virus in chickens, and HIV in humans. Collectively these studies support some aspects of virulence evolution theory, suggest modifications for other aspects, and show that predictions may apply in some virus:host interactions but not in others. Finally, we consider how virulence evolution theory applies to disease management in the field.

Case Studies of Physics Graduates' Personal Theories of Evolution

ERIC Educational Resources Information Center

Chan, Ke-Sheng

2005-01-01

This paper reports an interview case study with two physics doctoral students designed to explore their conceptions about the theory of evolution. Analysis of interview transcripts reveals that both students mistakenly constructed a "theory of evolution by environmentally driven adaptation" instead of the commonly accepted "theory…

Experimental Study of Damage Evolution in Circular Stirrup-Confined Concrete

PubMed Central

Li, Zuohua; Peng, Zhihan; Teng, Jun; Wang, Ying

2016-01-01

This paper presents an experimental study on circular stirrup-confined concrete specimens under uniaxial and monotonic load. The effects of stirrup volume ratio, stirrup yield strength and concrete strength on damage evolution of stirrup-confined concrete were investigated. The experimental results showed that the strength and ductility of concrete are improved by appropriate arrangement of the stirrup confinement. Firstly, the concrete damage evolution can be relatively restrained with the increase of the stirrup volume ratio. Secondly, higher stirrup yield strength usually causes larger confining pressures and slower concrete damage evolution. In contrast, higher concrete strength leads to higher brittleness, which accelerates the concrete damage evolution. A plastic strain expression is obtained through curve fitting, and a damage evolution equation for circular stirrup-confined concrete is proposed by introducing a confinement factor (C) based on the experimental data. The comparison results demonstrate that the proposed damage evolution model can accurately describe the experimental results. PMID:28773402

Experimental Study of Damage Evolution in Circular Stirrup-Confined Concrete.

PubMed

Li, Zuohua; Peng, Zhihan; Teng, Jun; Wang, Ying

2016-04-08

This paper presents an experimental study on circular stirrup-confined concrete specimens under uniaxial and monotonic load. The effects of stirrup volume ratio, stirrup yield strength and concrete strength on damage evolution of stirrup-confined concrete were investigated. The experimental results showed that the strength and ductility of concrete are improved by appropriate arrangement of the stirrup confinement. Firstly, the concrete damage evolution can be relatively restrained with the increase of the stirrup volume ratio. Secondly, higher stirrup yield strength usually causes larger confining pressures and slower concrete damage evolution. In contrast, higher concrete strength leads to higher brittleness, which accelerates the concrete damage evolution. A plastic strain expression is obtained through curve fitting, and a damage evolution equation for circular stirrup-confined concrete is proposed by introducing a confinement factor ( C ) based on the experimental data. The comparison results demonstrate that the proposed damage evolution model can accurately describe the experimental results.

The orbital evolution of NEA 30825 1900 TG1

NASA Astrophysics Data System (ADS)

Timoshkova, E. I.

2008-02-01

The orbital evolution of the near-Earth asteroid (NEA) 30825 1990 TG1 has been studied by numerical integration of the equations of its motion over the 100 000-year time interval with allowance for perturbations from eight major planets and Pluto, and the variations in its osculating orbit over this time interval were determined. The numerical integrations were performed using two methods: the Bulirsch-Stoer method and the Everhart method. The comparative analysis of the two resulting orbital evolutions of motion is presented for the time interval examined. The evolution of the asteroid motion is qualitatively the same for both variants, but the rate of evolution of the orbital elements is different. Our research confirms the known fact that the application of different integrators to the study of the long-term evolution of the NEA orbit may lead to different evolution tracks.

Does Increasing Biology Teacher Knowledge of Evolution and the Nature of Science Lead to Greater Preference for the Teaching of Evolution in Schools?

ERIC Educational Resources Information Center

Nehm, Ross H.; Schonfeld, Irvin Sam

2007-01-01

This study investigated whether or not an increase in secondary science teacher knowledge about evolution and the nature of science gained from completing a graduate-level evolution course was associated with greater preference for the teaching of evolution in schools. Forty-four precertified secondary biology teachers participated in a 14-week…

Evolution of Constructivism

ERIC Educational Resources Information Center

Liu, Chu Chih; Chen, I Ju

2010-01-01

The contrast between social constructivism and cognitive constructivism are depicted in different ways in many studies. The purpose of this paper is to summarize the evolution of constructivism and put a focus on social constructivism from the perception of Vygotsky. This study provides a general idea of the evolution of constructivism for people…

WATER VAPOR IN NEARBY INFRARED GALAXIES AS PROBED BY HERSCHEL

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yang Chentao; Gao Yu; Liu Daizhong

2013-07-10

We report the first systematic study of the submillimeter water vapor rotational emission lines in infrared (IR) galaxies based on the Fourier Transform Spectrometer (FTS) data of Herschel SPIRE. Among the 176 galaxies with publicly available FTS data, 45 have at least one H{sub 2}O emission line detected. The H{sub 2}O line luminosities range from {approx}1 Multiplication-Sign 10{sup 5} L{sub Sun} to {approx}5 Multiplication-Sign 10{sup 7} L{sub Sun} while the total IR luminosities (L{sub IR}) have a similar spread ({approx}1-300 Multiplication-Sign 10{sup 10} L{sub Sun }). In addition, emission lines of H{sub 2}O{sup +} and H{sub 2}{sup 18}O are alsomore » detected. H{sub 2}O is found, for most galaxies, to be the strongest molecular emitter after CO in FTS spectra. The luminosity of the five most important H{sub 2}O lines is near-linearly correlated with L{sub IR}, regardless of whether or not strong active galactic nucleus signature is present. However, the luminosity of H{sub 2}O(2{sub 11}-2{sub 02}) and H{sub 2}O(2{sub 20}-2{sub 11}) appears to increase slightly faster than linear with L{sub IR}. Although the slope turns out to be slightly steeper when z {approx} 2-4 ULIRGs are included, the correlation is still closely linear. We find that L{sub H{sub 2O}}/L{sub IR} decreases with increasing f{sub 25}/f{sub 60}, but see no dependence on f{sub 60}/f{sub 100}, possibly indicating that very warm dust contributes little to the excitation of the submillimeter H{sub 2}O lines. The average spectral line energy distribution (SLED) of the entire sample is consistent with individual SLEDs and the IR pumping plus collisional excitation model, showing that the strongest lines are H{sub 2}O(2{sub 02}-1{sub 11}) and H{sub 2}O(3{sub 21}-3{sub 12}).« less

Trends in global warming and evolution of matrix protein 2 family from influenza A virus.

PubMed

Yan, Shao-Min; Wu, Guang

2009-12-01

The global warming is an important factor affecting the biological evolution, and the influenza is an important disease that threatens humans with possible epidemics or pandemics. In this study, we attempted to analyze the trends in global warming and evolution of matrix protein 2 family from influenza A virus, because this protein is a target of anti-flu drug, and its mutation would have significant effect on the resistance to anti-flu drugs. The evolution of matrix protein 2 of influenza A virus from 1959 to 2008 was defined using the unpredictable portion of amino-acid pair predictability. Then the trend in this evolution was compared with the trend in the global temperature, the temperature in north and south hemispheres, and the temperature in influenza A virus sampling site, and species carrying influenza A virus. The results showed the similar trends in global warming and in evolution of M2 proteins although we could not correlate them at this stage of study. The study suggested the potential impact of global warming on the evolution of proteins from influenza A virus.

Interpreting Evidence: An Approach to Teaching Human Evolution in the Classroom

ERIC Educational Resources Information Center

DeSilva, Jeremy

2004-01-01

Paleoanthropology, which is the study of human evolution through fossil records, can be used as a tool for teaching human evolution in the classrooms. An updated approach to teaching human evolution and a model for explaining what is science and how it is done, is presented.

Similar traits, different genes? Examining convergent evolution in related weedy rice populations

USDA-ARS?s Scientific Manuscript database

Convergent phenotypic evolution may or may not be associated with parallel genotypic evolution. Agricultural weeds have repeatedly been selected for weed-adaptive traits such as rapid growth, increased seed dispersal and dormancy, thus providing an ideal system for the study of parallel evolution. H...

Darwin and Mendel: Evolution and Genetics

ERIC Educational Resources Information Center

Bizzo, Nelio; El-Hani, Charbel N.

2009-01-01

Many studies have shown that students' understanding of evolution is low and some sort of historical approach would be necessary in order to allow students to understand the theory of evolution. It is common to present Mendelian genetics to high school students prior to Biological Evolution, having in mind historical and epistemological…

The Teaching of Evolution and Creationism in Minnesota

ERIC Educational Resources Information Center

Moore, Randy; Kraemer, Karen

2005-01-01

The evolution-related attitudes and actions of Minnesota high school biology teachers were studied to estimate the prevalence of creationism among biology teachers. Minnesota's high school biology teachers were questioned about the evolution education in public schools regarding the percentage of biology teachers who teach evolution, class-time…

Emotional and Spiritual Quotient Approach Improve Biology Education Students’ Acceptance of Evolution Theory

NASA Astrophysics Data System (ADS)

Darussyamsu, R.; Fadilah, M.; Putri, D. H.

2018-04-01

Emotional and spiritual aspect is one of main factors that influence students’ acceptance of a theory. This study aim to measure university students’ acceptance of evolution by learns evolution using emotional and spiritual quotient (ESQ) approach. This is a quasi-experimental research using one shot case study design with the subject 36 biology educational students at Biology Department, Faculty of Mathematics and Natural Science, Universitas Negeri Padang. Data collected using the MATE instrument by Rutledge and Warden (2000) after the students learn evolution for eight meetings since January until March 2017. The result showed that by learning evolution theory combine with ESQ aspects increase students acceptance from very low become moderate acceptance. It concluded that ESQ aspects can improve students’ acceptance of evolution. Any criteria depend on it are discussed.

How is the rate of climatic-niche evolution related to climatic-niche breadth?

PubMed

Fisher-Reid, M Caitlin; Kozak, Kenneth H; Wiens, John J

2012-12-01

The rate of climatic-niche evolution is important to many research areas in ecology, evolution, and conservation biology, including responses of species to global climate change, spread of invasive species, speciation, biogeography, and patterns of species richness. Previous studies have implied that clades with higher rates of climatic-niche evolution among species should have species with narrower niche breadths, but there is also evidence suggesting the opposite pattern. However, the relationships between rate and breadth have not been explicitly analyzed. Here, we examine the relationships between the rate of climatic-niche evolution and climatic-niche breadth using phylogenetic and climatic data for 250 species in the salamander family Plethodontidae, a group showing considerable variation in both rates of climatic-niche evolution and climatic-niche breadths. Contrary to some expectations, we find no general relationship between climatic-niche breadth and the rate of climatic-niche evolution. Climatic-niche breadths for some ecologically important climatic variables considered separately (temperature seasonality and annual precipitation) do show significant relationships with the rate of climatic-niche evolution, but rates are faster in clades in which species have broader (not narrower) niche breadths. In summary, our results show that narrower niche breadths are not necessarily associated with faster rates of niche evolution. © 2012 The Author(s). Evolution© 2012 The Society for the Study of Evolution.

Practices and Perspectives of College Instructors on Addressing Religious Beliefs When Teaching Evolution

PubMed Central

Barnes, M. Elizabeth; Brownell, Sara E.

2016-01-01

Evolution is a core concept of biology, and yet many college biology students do not accept evolution because of their religious beliefs. However, we do not currently know how instructors perceive their role in helping students accept evolution or how they address the perceived conflict between religion and evolution when they teach evolution. This study explores instructor practices and beliefs related to mitigating students’ perceived conflict between religion and evolution. Interviews with 32 instructors revealed that many instructors do not believe it is their goal to help students accept evolution and that most instructors do not address the perceived conflict between religion and evolution. Instructors cited many barriers to discussing religion in the context of evolution in their classes, most notably the instructors’ own personal beliefs that religion and evolution may be incompatible. These data are exploratory and are intended to stimulate a series of questions about how we as college biology instructors teach evolution. PMID:27193289

Student Teachers' Approaches to Teaching Biological Evolution

NASA Astrophysics Data System (ADS)

Borgerding, Lisa A.; Klein, Vanessa A.; Ghosh, Rajlakshmi; Eibel, Albert

2015-06-01

Evolution is fundamental to biology and scientific literacy, but teaching high school evolution is often difficult. Evolution teachers face several challenges including limited content knowledge, personal conflicts with evolution, expectations of resistance, concerns about students' conflicts with religion, and curricular constraints. Evolution teaching can be particularly challenging for student teachers who are just beginning to gain pedagogical knowledge and pedagogical content knowledge related to evolution teaching and who seek approval from university supervisors and cooperating teachers. Science teacher educators need to know how to best support student teachers as they broach the sometimes daunting task of teaching evolution within student teaching placements. This multiple case study report documents how three student teachers approached evolution instruction and what influenced their approaches. Data sources included student teacher interviews, field note observations for 4-5 days of evolution instruction, and evolution instructional artifacts. Data were analyzed using grounded theory approaches to develop individual cases and a cross-case analysis. Seven influences (state exams and standards, cooperating teacher, ideas about teaching and learning, concerns about evolution controversy, personal commitment to evolution, knowledge and preparation for teaching evolution, and own evolution learning experiences) were identified and compared across cases. Implications for science teacher preparation and future research are provided.

Evolution dynamics modeling and simulation of logistics enterprise's core competence based on service innovation

NASA Astrophysics Data System (ADS)

Yang, Bo; Tong, Yuting

2017-04-01

With the rapid development of economy, the development of logistics enterprises in China is also facing a huge challenge, especially the logistics enterprises generally lack of core competitiveness, and service innovation awareness is not strong. Scholars in the process of studying the core competitiveness of logistics enterprises are mainly from the perspective of static stability, not from the perspective of dynamic evolution to explore. So the author analyzes the influencing factors and the evolution process of the core competence of logistics enterprises, using the method of system dynamics to study the cause and effect of the evolution of the core competence of logistics enterprises, construct a system dynamics model of evolution of core competence logistics enterprises, which can be simulated by vensim PLE. The analysis for the effectiveness and sensitivity of simulation model indicates the model can be used as the fitting of the evolution process of the core competence of logistics enterprises and reveal the process and mechanism of the evolution of the core competence of logistics enterprises, and provide management strategies for improving the core competence of logistics enterprises. The construction and operation of computer simulation model offers a kind of effective method for studying the evolution of logistics enterprise core competence.

The emphasis given to evolution in state science standards: A lever for change in evolution education?

NASA Astrophysics Data System (ADS)

Skoog, Gerald; Bilica, Kimberly

2002-07-01

This study analyzed the science frameworks of 49 states and the District of Colombia to determine the emphasis given to evolution in these documents at the middle and secondary levels. These concepts were species evolve over time, speciation, diversity of life, descent with modification from common ancestry, evidence of evolution, natural selection, pace and direction of evolution, and human evolution. Collectively, the 50 science frameworks emphasized evolution in a manner that suggests that if the public's support for standards-based curricula is a reality, the study of evolution will be emphasized in an unprecedented manner in the nation's schools in the near future. However, all concepts were not emphasized equally in these documents. For example, human evolution was included in only seven documents. The word evolution is absent from some standards. Despite these negatives, recent actions to improve existing standards or to adopt new standards that emphasize evolution have occurred. The metaphor lever of change is often used in the context of school reform. This metaphor suggests a simple system where one change can result in a desired outcome. However, in classrooms where curriculum decisions evolve constantly, multiple factors interact and reinforce one another in response to both internal and external contingencies that emerge. Educational change can not be reduced to a simple linear cause/effect situation. The change process involved is nonlinear where what goes in is not proportional to what comes out because of feedback loops and other factors that complicate results. This nonlinearity is reflected in the varied responses of teachers to specific contingencies. Yet, systems can be changed and nudged towards a structure where desired outcomes will emerge. Judicial rulings indicating that the teaching of evolution cannot be prohibited or equal time for creationism mandated, improved coverage of evolution in secondary school biology textbooks, the negative response of many leaders, scientists, organizations, and editorial writers to the 1999 decision of the Kansas State Board of Education to deemphasize and misrepresent evolution in the state's science standards, and the emphasis given to evolution in the standards reviewed for this study, all coalesce to provide needed support for administrators and teachers who are striving to create science curricula that emphasize evolution in a manner commensurate with its importance in understanding the natural world and our place within it.

Integrative studies of cultural evolution: crossing disciplinary boundaries to produce new insights.

PubMed

Kolodny, Oren; Feldman, Marcus W; Creanza, Nicole

2018-04-05

Culture evolves according to dynamics on multiple temporal scales, from individuals' minute-by-minute behaviour to millennia of cultural accumulation that give rise to population-level differences. These dynamics act on a range of entities-including behavioural sequences, ideas and artefacts as well as individuals, populations and whole species-and involve mechanisms at multiple levels, from neurons in brains to inter-population interactions. Studying such complex phenomena requires an integration of perspectives from a diverse array of fields, as well as bridging gaps between traditionally disparate areas of study. In this article, which also serves as an introduction to the current special issue, we highlight some specific respects in which the study of cultural evolution has benefited and should continue to benefit from an integrative approach. We showcase a number of pioneering studies of cultural evolution that bring together numerous disciplines. These studies illustrate the value of perspectives from different fields for understanding cultural evolution, such as cognitive science and neuroanatomy, behavioural ecology, population dynamics, and evolutionary genetics. They also underscore the importance of understanding cultural processes when interpreting research about human genetics, neuroscience, behaviour and evolution.This article is part of the theme issue 'Bridging cultural gaps: interdisciplinary studies in human cultural evolution'. © 2018 The Author(s).

Cognitive Evolution by MMSE in Poststroke Patients

ERIC Educational Resources Information Center

da Costa, Fabricia Azevedo

2010-01-01

The aim of this study was to investigate the cognitive and clinical evolution of post-acute stroke patients and the evolution of each Mini-Mental State Examination (MMSE) item. A longitudinal study was conducted with 42 poststroke individuals in rehabilitation. The MMSE and the National Institutes of Health Stroke Scale were used to assess…

Age of acquisition predicts rate of lexical evolution.

PubMed

Monaghan, Padraic

2014-12-01

The processes taking place during language acquisition are proposed to influence language evolution. However, evidence demonstrating the link between language learning and language evolution is, at best, indirect, constituting studies of laboratory-based artificial language learning studies or computational simulations of diachronic change. In the current study, a direct link between acquisition and evolution is established, showing that for two hundred fundamental vocabulary items, the age at which words are acquired is a predictor of the rate at which they have changed in studies of language evolution. Early-acquired words are more salient and easier to process than late-acquired words, and these early-acquired words are also more stably represented within the community's language. Analysing the properties of these early-acquired words potentially provides insight into the origins of communication, highlighting features of words that have been ultra-conserved in language. Copyright © 2014 Elsevier B.V. All rights reserved.

Preparing Biology Teachers to Teach Evolution in a Project-Based Approach

ERIC Educational Resources Information Center

Cook, Kristin; Buck, Gayle; Park Rogers, Meredith

2012-01-01

This study investigates a project-based learning (PBL) approach to teaching evolution to inform efforts in teacher preparation. Data analysis of a secondary biology educator teaching evolution through a PBL approach illuminated: (1) active student voice, which allowed students to reflect on their positioning on evolution and consider multiple…

The Effectiveness of an Online Curriculum on High School Students' Understanding of Biological Evolution

ERIC Educational Resources Information Center

Marsteller, Robert B.; Bodzin, Alec M.

2015-01-01

An online curriculum about biological evolution was designed to promote increased student content knowledge and evidentiary reasoning. A feasibility study was conducted with 77 rural high school biology students who learned with the online biological evolution unit. Data sources included the Biological Evolution Assessment Measure (BEAM), an…

Student Acquisition of Biological Evolution-Related Misconceptions: The Role of Public High School Introductory Biology Teachers

ERIC Educational Resources Information Center

Yates, Tony Brett

2011-01-01

In order to eliminate student misconceptions concerning biological evolution, it is important to identify their sources. The purposes of this study were to: (a) identify biological evolution-related misconceptions held by Oklahoma public high school Biology I teachers; (b) identify biological evolution-related misconceptions held by Oklahoma…

Adaptive laboratory evolution -- principles and applications for biotechnology.

PubMed

Dragosits, Martin; Mattanovich, Diethard

2013-07-01

Adaptive laboratory evolution is a frequent method in biological studies to gain insights into the basic mechanisms of molecular evolution and adaptive changes that accumulate in microbial populations during long term selection under specified growth conditions. Although regularly performed for more than 25 years, the advent of transcript and cheap next-generation sequencing technologies has resulted in many recent studies, which successfully applied this technique in order to engineer microbial cells for biotechnological applications. Adaptive laboratory evolution has some major benefits as compared with classical genetic engineering but also some inherent limitations. However, recent studies show how some of the limitations may be overcome in order to successfully incorporate adaptive laboratory evolution in microbial cell factory design. Over the last two decades important insights into nutrient and stress metabolism of relevant model species were acquired, whereas some other aspects such as niche-specific differences of non-conventional cell factories are not completely understood. Altogether the current status and its future perspectives highlight the importance and potential of adaptive laboratory evolution as approach in biotechnological engineering.

Influence of evolution on the stability of ecological communities.

PubMed

Loeuille, Nicolas

2010-12-01

In randomly assembled communities, diversity is known to have a destabilizing effect. Evolution may affect this result, but our theoretical knowledge of its role is mostly limited to models of small food webs. In the present article, I introduce evolution in a two-species Lotka-Volterra model in which I vary the interaction type and the cost constraining evolution. Regardless of the cost type, evolution tends to stabilize the dynamics more often in trophic interactions than for mutualism or competition. I then use simulations to study the effect of evolution in larger communities that contain all interaction types. Results suggest that evolution usually stabilizes the dynamics. This stabilizing effect is stronger when evolution affects trophic interactions, but happens for all interaction types. Stabilization decreases with diversity and evolution becomes destabilizing in very diverse communities. This suggests that evolution may not counteract the destabilizing effect of diversity observed in random communities. © 2010 Blackwell Publishing Ltd/CNRS.

Can the experimental evolution programme help us elucidate the genetic basis of adaptation in nature?

PubMed

Bailey, Susan F; Bataillon, Thomas

2016-01-01

There have been a variety of approaches taken to try to characterize and identify the genetic basis of adaptation in nature, spanning theoretical models, experimental evolution studies and direct tests of natural populations. Theoretical models can provide formalized and detailed hypotheses regarding evolutionary processes and patterns, from which experimental evolution studies can then provide important proofs of concepts and characterize what is biologically reasonable. Genetic and genomic data from natural populations then allow for the identification of the particular factors that have and continue to play an important role in shaping adaptive evolution in the natural world. Further to this, experimental evolution studies allow for tests of theories that may be difficult or impossible to test in natural populations for logistical and methodological reasons and can even generate new insights, suggesting further refinement of existing theories. However, as experimental evolution studies often take place in a very particular set of controlled conditions--that is simple environments, a small range of usually asexual species, relatively short timescales--the question remains as to how applicable these experimental results are to natural populations. In this review, we discuss important insights coming from experimental evolution, focusing on four key topics tied to the evolutionary genetics of adaptation, and within those topics, we discuss the extent to which the experimental work compliments and informs natural population studies. We finish by making suggestions for future work in particular a need for natural population genomic time series data, as well as the necessity for studies that combine both experimental evolution and natural population approaches. © 2015 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd.

Genetics and recent human evolution.

PubMed

Templeton, Alan R

2007-07-01

Starting with "mitochondrial Eve" in 1987, genetics has played an increasingly important role in studies of the last two million years of human evolution. It initially appeared that genetic data resolved the basic models of recent human evolution in favor of the "out-of-Africa replacement" hypothesis in which anatomically modern humans evolved in Africa about 150,000 years ago, started to spread throughout the world about 100,000 years ago, and subsequently drove to complete genetic extinction (replacement) all other human populations in Eurasia. Unfortunately, many of the genetic studies on recent human evolution have suffered from scientific flaws, including misrepresenting the models of recent human evolution, focusing upon hypothesis compatibility rather than hypothesis testing, committing the ecological fallacy, and failing to consider a broader array of alternative hypotheses. Once these flaws are corrected, there is actually little genetic support for the out-of-Africa replacement hypothesis. Indeed, when genetic data are used in a hypothesis-testing framework, the out-of-Africa replacement hypothesis is strongly rejected. The model of recent human evolution that emerges from a statistical hypothesis-testing framework does not correspond to any of the traditional models of human evolution, but it is compatible with fossil and archaeological data. These studies also reveal that any one gene or DNA region captures only a small part of human evolutionary history, so multilocus studies are essential. As more and more loci became available, genetics will undoubtedly offer additional insights and resolutions of human evolution.

Within-host evolution of bacterial pathogens

PubMed Central

Didelot, Xavier; Walker, A. Sarah; Peto, Tim E.; Crook, Derrick W.; Wilson, Daniel J.

2016-01-01

Whole genome sequencing has opened the way to investigating the dynamics and genomic evolution of bacterial pathogens during colonization and infection of humans. The application of this technology to the longitudinal study of adaptation in the infected host — in particular, the evolution of drug resistance and host adaptation in patients chronically infected with opportunistic pathogens — has revealed remarkable patterns of convergent evolution, pointing to an inherent repeatability of evolution. In this Review, we describe how these studies have advanced our understanding of the mechanisms and principles of within-host genome evolution, and we consider the consequences of findings such as a potent adaptive potential for pathogenicity. Finally, we discuss the possibility that genomics may be used in the future to predict the clinical progression of bacterial infections, and to suggest the best treatment option. PMID:26806595

Within-host evolution of bacterial pathogens.

PubMed

Didelot, Xavier; Walker, A Sarah; Peto, Tim E; Crook, Derrick W; Wilson, Daniel J

2016-03-01

Whole-genome sequencing has opened the way for investigating the dynamics and genomic evolution of bacterial pathogens during the colonization and infection of humans. The application of this technology to the longitudinal study of adaptation in an infected host--in particular, the evolution of drug resistance and host adaptation in patients who are chronically infected with opportunistic pathogens--has revealed remarkable patterns of convergent evolution, suggestive of an inherent repeatability of evolution. In this Review, we describe how these studies have advanced our understanding of the mechanisms and principles of within-host genome evolution, and we consider the consequences of findings such as a potent adaptive potential for pathogenicity. Finally, we discuss the possibility that genomics may be used in the future to predict the clinical progression of bacterial infections and to suggest the best option for treatment.

Case studies in teaching evolution: The intersection of dilemmas in practice

NASA Astrophysics Data System (ADS)

Fisher, Rachel

Despite recent science education reform documents citing evolution as a core concept to be taught in grades K-12, research shows problems with how it is currently taught. Evolution is often avoided, teachers minimize its importance within biology, infuse misconceptions, and/or interject non-scientific ideologies into lessons. My research focused on how teachers in two geographically and culturally distinct school districts in the southwestern U.S. negotiate dilemmas during an evolution unit. One school district was rural and had a large population of Mormon students, while the other district was urban, with a large majority Mexican/Mexican-American students. Using a case study approach, I observed three biology teachers during their evolution lessons, interviewed them throughout the unit, co-planned lessons with them, and collected artifacts from this unit, including anonymous student work. I also included data from four genetics lessons for each teacher to determine if the issues that arose during the evolution unit were a result of the general practice of the teacher, or if they were unique to evolution. Findings showed teachers' backgrounds and comfort levels with evolution, in addition to their perceptions of community context, affected how they negotiated pedagogical, conceptual, political, and cultural dilemmas. This study's findings will inform in-service teachers' future practice and professional development tools to aid with their teaching---this may include methods to negotiate some of the political (e.g. state standards) or cultural (e.g. religious resistance) issues inherent to teaching evolution.

Modelling the evolution and diversity of cumulative culture

PubMed Central

Enquist, Magnus; Ghirlanda, Stefano; Eriksson, Kimmo

2011-01-01

Previous work on mathematical models of cultural evolution has mainly focused on the diffusion of simple cultural elements. However, a characteristic feature of human cultural evolution is the seemingly limitless appearance of new and increasingly complex cultural elements. Here, we develop a general modelling framework to study such cumulative processes, in which we assume that the appearance and disappearance of cultural elements are stochastic events that depend on the current state of culture. Five scenarios are explored: evolution of independent cultural elements, stepwise modification of elements, differentiation or combination of elements and systems of cultural elements. As one application of our framework, we study the evolution of cultural diversity (in time as well as between groups). PMID:21199845

Brownian model of transcriptome evolution and phylogenetic network visualization between tissues.

PubMed

Gu, Xun; Ruan, Hang; Su, Zhixi; Zou, Yangyun

2017-09-01

While phylogenetic analysis of transcriptomes of the same tissue is usually congruent with the species tree, the controversy emerges when multiple tissues are included, that is, whether species from the same tissue are clustered together, or different tissues from the same species are clustered together. Recent studies have suggested that phylogenetic network approach may shed some lights on our understanding of multi-tissue transcriptome evolution; yet the underlying evolutionary mechanism remains unclear. In this paper we develop a Brownian-based model of transcriptome evolution under the phylogenetic network that can statistically distinguish between the patterns of species-clustering and tissue-clustering. Our model can be used as a null hypothesis (neutral transcriptome evolution) for testing any correlation in tissue evolution, can be applied to cancer transcriptome evolution to study whether two tumors of an individual appeared independently or via metastasis, and can be useful to detect convergent evolution at the transcriptional level. Copyright © 2017. Published by Elsevier Inc.

Evolution education in Canada's museums: Where is human evolution?

NASA Astrophysics Data System (ADS)

Bean, Sarah

While an interest in the origin of human beings may be a cultural universal, there are various views and beliefs about how this event took place. In Canada, a recent (2010) Angus Reid survey revealed that only 61% of Canadians accepted that humans evolved over millions of years; 39% of the population either believed in creationism or did not accept evolution as a scientific fact. These statistics suggest that human evolution education is a topic that needs to be addressed. This thesis investigates the role of museums in public education about human evolution. Prior to this study, the number of Canadian museums with exhibits about this topic was unknown. Sixteen Canadian museums participated in this study, and the results demonstrated that only two had permanent exhibits on human evolution, and one creationist museum presented a biblically-based account of human origins. Here, it is argued that more of Canada's museums should consider incorporating human evolution education into their mandates.

Studying the laws of software evolution in a long-lived FLOSS project.

PubMed

Gonzalez-Barahona, Jesus M; Robles, Gregorio; Herraiz, Israel; Ortega, Felipe

2014-07-01

Some free, open-source software projects have been around for quite a long time, the longest living ones dating from the early 1980s. For some of them, detailed information about their evolution is available in source code management systems tracking all their code changes for periods of more than 15 years. This paper examines in detail the evolution of one of such projects, glibc, with the main aim of understanding how it evolved and how it matched Lehman's laws of software evolution. As a result, we have developed a methodology for studying the evolution of such long-lived projects based on the information in their source code management repository, described in detail several aspects of the history of glibc, including some activity and size metrics, and found how some of the laws of software evolution may not hold in this case. © 2013 The Authors. Journal of Software: Evolution and Process published by John Wiley & Sons Ltd.

Cognition and the evolution of camouflage.

PubMed

Skelhorn, John; Rowe, Candy

2016-02-24

Camouflage is one of the most widespread forms of anti-predator defence and prevents prey individuals from being detected or correctly recognized by would-be predators. Over the past decade, there has been a resurgence of interest in both the evolution of prey camouflage patterns, and in understanding animal cognition in a more ecological context. However, these fields rarely collide, and the role of cognition in the evolution of camouflage is poorly understood. Here, we review what we currently know about the role of both predator and prey cognition in the evolution of prey camouflage, outline why cognition may be an important selective pressure driving the evolution of camouflage and consider how studying the cognitive processes of animals may prove to be a useful tool to study the evolution of camouflage, and vice versa. In doing so, we highlight that we still have a lot to learn about the role of cognition in the evolution of camouflage and identify a number of avenues for future research. © 2016 The Author(s).

Cognition and the evolution of camouflage

PubMed Central

2016-01-01

Camouflage is one of the most widespread forms of anti-predator defence and prevents prey individuals from being detected or correctly recognized by would-be predators. Over the past decade, there has been a resurgence of interest in both the evolution of prey camouflage patterns, and in understanding animal cognition in a more ecological context. However, these fields rarely collide, and the role of cognition in the evolution of camouflage is poorly understood. Here, we review what we currently know about the role of both predator and prey cognition in the evolution of prey camouflage, outline why cognition may be an important selective pressure driving the evolution of camouflage and consider how studying the cognitive processes of animals may prove to be a useful tool to study the evolution of camouflage, and vice versa. In doing so, we highlight that we still have a lot to learn about the role of cognition in the evolution of camouflage and identify a number of avenues for future research. PMID:26911959

Studying the laws of software evolution in a long-lived FLOSS project

PubMed Central

Gonzalez-Barahona, Jesus M; Robles, Gregorio; Herraiz, Israel; Ortega, Felipe

2014-01-01

Some free, open-source software projects have been around for quite a long time, the longest living ones dating from the early 1980s. For some of them, detailed information about their evolution is available in source code management systems tracking all their code changes for periods of more than 15 years. This paper examines in detail the evolution of one of such projects, glibc, with the main aim of understanding how it evolved and how it matched Lehman's laws of software evolution. As a result, we have developed a methodology for studying the evolution of such long-lived projects based on the information in their source code management repository, described in detail several aspects of the history of glibc, including some activity and size metrics, and found how some of the laws of software evolution may not hold in this case. © 2013 The Authors. Journal of Software: Evolution and Process published by John Wiley & Sons Ltd. PMID:25893093

Cultural evolutionary theory: How culture evolves and why it matters

PubMed Central

Creanza, Nicole; Kolodny, Oren; Feldman, Marcus W.

2017-01-01

Human cultural traits—behaviors, ideas, and technologies that can be learned from other individuals—can exhibit complex patterns of transmission and evolution, and researchers have developed theoretical models, both verbal and mathematical, to facilitate our understanding of these patterns. Many of the first quantitative models of cultural evolution were modified from existing concepts in theoretical population genetics because cultural evolution has many parallels with, as well as clear differences from, genetic evolution. Furthermore, cultural and genetic evolution can interact with one another and influence both transmission and selection. This interaction requires theoretical treatments of gene–culture coevolution and dual inheritance, in addition to purely cultural evolution. In addition, cultural evolutionary theory is a natural component of studies in demography, human ecology, and many other disciplines. Here, we review the core concepts in cultural evolutionary theory as they pertain to the extension of biology through culture, focusing on cultural evolutionary applications in population genetics, ecology, and demography. For each of these disciplines, we review the theoretical literature and highlight relevant empirical studies. We also discuss the societal implications of the study of cultural evolution and of the interactions of humans with one another and with their environment. PMID:28739941

Periodic Pattern of Genetic and Fitness Diversity during Evolution of an Artificial Cell-Like System.

PubMed

Ichihashi, Norikazu; Aita, Takuyo; Motooka, Daisuke; Nakamura, Shota; Yomo, Tetsuya

2015-12-01

Genetic and phenotypic diversity are the basis of evolution. Despite their importance, however, little is known about how they change over the course of evolution. In this study, we analyzed the dynamics of the adaptive evolution of a simple evolvable artificial cell-like system using single-molecule real-time sequencing technology that reads an entire single artificial genome. We found that the genomic RNA population increases in fitness intermittently, correlating with a periodic pattern of genetic and fitness diversity produced by repeated diversification and domination. In the diversification phase, a genomic RNA population spreads within a genetic space by accumulating mutations until mutants with higher fitness are generated, resulting in an increase in fitness diversity. In the domination phase, the mutants with higher fitness dominate, decreasing both the fitness and genetic diversity. This study reveals the dynamic nature of genetic and fitness diversity during adaptive evolution and demonstrates the utility of a simplified artificial cell-like system to study evolution at an unprecedented resolution. © The Author 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Cultural evolutionary theory: How culture evolves and why it matters.

PubMed

Creanza, Nicole; Kolodny, Oren; Feldman, Marcus W

2017-07-24

Human cultural traits-behaviors, ideas, and technologies that can be learned from other individuals-can exhibit complex patterns of transmission and evolution, and researchers have developed theoretical models, both verbal and mathematical, to facilitate our understanding of these patterns. Many of the first quantitative models of cultural evolution were modified from existing concepts in theoretical population genetics because cultural evolution has many parallels with, as well as clear differences from, genetic evolution. Furthermore, cultural and genetic evolution can interact with one another and influence both transmission and selection. This interaction requires theoretical treatments of gene-culture coevolution and dual inheritance, in addition to purely cultural evolution. In addition, cultural evolutionary theory is a natural component of studies in demography, human ecology, and many other disciplines. Here, we review the core concepts in cultural evolutionary theory as they pertain to the extension of biology through culture, focusing on cultural evolutionary applications in population genetics, ecology, and demography. For each of these disciplines, we review the theoretical literature and highlight relevant empirical studies. We also discuss the societal implications of the study of cultural evolution and of the interactions of humans with one another and with their environment.

Introducing Evolution to Non-Biology Majors via the Fossil Record: A Case Study from the Israeli High School System.

ERIC Educational Resources Information Center

Dodick, Jeff; Orion, Nir

2003-01-01

Discusses challenges faced in the teaching and learning of evolution. Presents a curricular program and a case study on evolutionary biology. Investigates students' conceptual knowledge after exposure to the program "From Dinosaurs to Darwin," which focuses on fossil records as evidence of evolution. (Contains 32 references.) (YDS)

EcoEvo-MAPS: An Ecology and Evolution Assessment for Introductory through Advanced Undergraduates

ERIC Educational Resources Information Center

Summers, Mindi M.; Couch, Brian A.; Knight, Jennifer K.; Brownell, Sara E.; Crowe, Alison J.; Semsar, Katharine; Wright, Christian D.; Smith, Michelle K.

2018-01-01

A new assessment tool, Ecology and Evolution--Measuring Achievement and Progression in Science or EcoEvo-MAPS, measures student thinking in ecology and evolution during an undergraduate course of study. EcoEvo-MAPS targets foundational concepts in ecology and evolution and uses a novel approach that asks students to evaluate a series of…

Workshop on Early Crustal Genesis: Implications from Earth

NASA Technical Reports Server (NTRS)

Phinney, W. C. (Compiler)

1981-01-01

Ways to foster increased study of the early evolution of the Earth, considering the planet as a whole, were explored and recommendations were made to NASA with the intent of exploring optimal ways for integrating Archean studies with problems of planetary evolution. Major themes addressed include: (1) Archean contribution to constraints for modeling planetary evolution; (2) Archean surface conditions and processes as clues to early planetary history; and (3) Archean evidence for physical, chemical and isotopic transfer processes in early planetary crusts. Ten early crustal evolution problems are outlined.

Laboratory Calibration Studies in Support of ORGANICS on the International Space Station: Evolution of Organic Matter in Space

NASA Technical Reports Server (NTRS)

Ruiterkamp, R.; Ehrenfreund, P.; Halasinski, T.; Salama, F.; Foing, B.; Schmidt, W.

2002-01-01

This paper describes the scientific overview and current status of ORGANICS an exposure experiment performed on the International Space Station (ISS) to study the evolution of organic matter in space (PI: P. Ehrenfreund), with supporting laboratory experiments performed at NASA Ames. ORGANICS investigates the chemical evolution of samples submitted to long-duration exposure to space environment in near-Earth orbit. This experiment will provide information on the nature, evolution, and survival of carbon species in the interstellar medium (ISM) and in solar system targets.

Virulence evolution at the front line of spreading epidemics.

PubMed

Griette, Quentin; Raoul, Gaël; Gandon, Sylvain

2015-11-01

Understanding and predicting the spatial spread of emerging pathogens is a major challenge for the public health management of infectious diseases. Theoretical epidemiology shows that the speed of an epidemic is governed by the life-history characteristics of the pathogen and its ability to disperse. Rapid evolution of these traits during the invasion may thus affect the speed of epidemics. Here we study the influence of virulence evolution on the spatial spread of an epidemic. At the edge of the invasion front, we show that more virulent and transmissible genotypes are expected to win the competition with other pathogens. Behind the front line, however, more prudent exploitation strategies outcompete virulent pathogens. Crucially, even when the presence of the virulent mutant is limited to the edge of the front, the invasion speed can be dramatically altered by pathogen evolution. We support our analysis with individual-based simulations and we discuss the additional effects of demographic stochasticity taking place at the front line on virulence evolution. We confirm that an increase of virulence can occur at the front, but only if the carrying capacity of the invading pathogen is large enough. These results are discussed in the light of recent empirical studies examining virulence evolution at the edge of spreading epidemics. © 2015 The Author(s). Evolution © 2015 The Society for the Study of Evolution.

Biology Professors' and Teachers' Positions Regarding Biological Evolution and Evolution Education in a Middle Eastern Society

NASA Astrophysics Data System (ADS)

BouJaoude, Saouma; Asghar, Anila; Wiles, Jason R.; Jaber, Lama; Sarieddine, Diana; Alters, Brian

2011-05-01

This study investigated three questions: (1) What are Lebanese secondary school (Grade 9-12) biology teachers' and university biology professors' positions regarding biological evolution?, (2) How do participants' religious affiliations relate to their positions about evolutionary science?, and (3) What are participants' positions regarding evolution education? Participants were 20 secondary school biology teachers and seven university biology professors. Seventy percent of the teachers and 60% of the professors were Muslim. Data came from semi-structured interviews with participants. Results showed that nine (Christian or Muslim Druze) teachers accepted the theory, five (four Muslim) rejected it because it contradicted religious beliefs, and three (Muslim) reinterpreted it because evolution did not include humans. Teachers who rejected or reinterpreted the evolutionary theory said that it should not be taught (three), evolution and creationism should be given equal time (two), or students should be allowed to take their own stand. Two professors indicated that they taught evolution explicitly and five said that they integrated it in other biology content. One Muslim professor said that she stressed 'the role of God in creation during instruction on evolution'. It seems that years of studying and teaching biology have not had a transformative effect on how a number of teachers and professors think about evolution.

Mutation—The Engine of Evolution: Studying Mutation and Its Role in the Evolution of Bacteria

PubMed Central

Hershberg, Ruth

2015-01-01

Mutation is the engine of evolution in that it generates the genetic variation on which the evolutionary process depends. To understand the evolutionary process we must therefore characterize the rates and patterns of mutation. Starting with the seminal Luria and Delbruck fluctuation experiments in 1943, studies utilizing a variety of approaches have revealed much about mutation rates and patterns and about how these may vary between different bacterial strains and species along the chromosome and between different growth conditions. This work provides a critical overview of the results and conclusions drawn from these studies, of the debate surrounding some of these conclusions, and of the challenges faced when studying mutation and its role in bacterial evolution. PMID:26330518

A Study of Pulse Shape Evolution and X-Ray Reprocessing in Her X-1

NASA Technical Reports Server (NTRS)

Cushman, Paula P.

1998-01-01

This study focused on the pulse shape evolution and spectral properties of the X-ray binary Her X-1 with regard to the well known 35-day cycle of Her X-1. A follow-up set of RXTE observations has been conducted in RXTE AO-2 phase and the two observation sets are being analyzed together. We presented results of early analysis of pulse shape evolution in "Proceedings of the Fourth Compton Symposium". More advanced analysis was presented at the HEAD meeting in November, 1997 in Estes Park, Colorado. A related study of the 35-day cycle using RXTE/ASM data, which laid out the overall picture within which the more detailed PCA observations could be placed has also been conducted. The results of this study have been published. A pair of papers on the detailed pulse evolution and the spectral/color evolution are currently being prepared for publication. Some of the significant results of this study have been a confirmation of the detailed pulse profile changes at the end of the Main High state in HerX-1 first observed by GINGA, observations of the pulse evolution in several Short High states which agree with the pulse evolution pattern predicted using a disk occultation model, observation of a systematic lengthening of the eclipse egress during the Main High state of the 35-day phase and observation of a new type of extended eclipse ingress during which pulsations cease to observed during the Short High state.

Jupiter and Planet Earth. [planetary and biological evolution and natural satellites

NASA Technical Reports Server (NTRS)

1975-01-01

The evolution of Jupiter and Earth are discussed along with their atmospheres, the radiation belts around both planets, natural satellites, the evolution of life, and the Pioneer 10. Educational study projects are also included.

Science for Survival: The Modern Synthesis of Evolution and the Biological Sciences Curriculum Study

ERIC Educational Resources Information Center

Green, Lisa Anne

2012-01-01

In this historical dissertation, I examined the process of curriculum development in the Biological Sciences Curriculum Study (BSCS) in the United States during the period 1959-1963. The presentation of evolution in the high school texts was based on a more robust form of Darwinian evolution which developed during the 1930s and 1940s called…

Evolution of the orbit of asteroid 4179 Toutatis over 11,550 years.

NASA Astrophysics Data System (ADS)

Zausaev, A. F.; Pushkarev, A. N.

1994-05-01

The Everhart method is used to study evolution of the orbit of the asteroid 4179 Toutatis, a member of the Apollo group, over the time period 9300 B.C. to 2250 A.D. Minimum asteroid-Earth distances during the evolution process are calculated. It is shown that the asteroid presents no danger to the Earth over the interval studied.

Clearing the Highest Hurdle: Human-Based Case Studies Broaden Students' Knowledge of Core Evolutionary Concepts

ERIC Educational Resources Information Center

Werth, Alexander J.

2009-01-01

An anonymous survey instrument was used for a ten year study to gauge college student attitudes toward evolution. Results indicate that students are most likely to accept evolution as a historical process for change in physical features of non-human organisms. They are less likely to accept evolution as an ongoing process that shapes all traits…

Phylogenetic analyses of mode of larval development.

PubMed

Hart, M

2000-12-01

Phylogenies based on morphological or molecular characters have been used to provide an evolutionary context for analysis of larval evolution. Studies of gastropods, bivalves, tunicates, sea stars, sea urchins, and polychaetes have revealed massive parallel evolution of similar larval forms. Some of these studies were designed to test, and have rejected, the species selection hypothesis for evolutionary trends in the frequency of derived larvae or life history traits. However, the lack of well supported models of larval character evolution leave some doubt about the quality of inferences of larval evolution from phylogenies of living taxa. Better models based on maximum likelihood methods and known prior probabilities of larval character state changes will improve our understanding of the history of larval evolution. Copyright 2000 Academic Press.

Cis-regulatory Elements and Human Evolution

PubMed Central

Siepel, Adam

2014-01-01

Modification of gene regulation has long been considered an important force in human evolution, particularly through changes to cis-regulatory elements (CREs) that function in transcriptional regulation. For decades, however, the study of cis-regulatory evolution was severely limited by the available data. New data sets describing the locations of CREs and genetic variation within and between species have now made it possible to study CRE evolution much more directly on a genome-wide scale. Here, we review recent research on the evolution of CREs in humans based on large-scale genomic data sets. We consider inferences based on primate divergence, human polymorphism, and combinations of divergence and polymorphism. We then consider “new frontiers” in this field stemming from recent research on transcriptional regulation. PMID:25218861

Conceptual Ecology of the Evolution Acceptance among Greek Education Students: Knowledge, Religious Practices and Social Influences

ERIC Educational Resources Information Center

Athanasiou, Kyriacos; Papadopoulou, Penelope

2012-01-01

In this study, we explored some of the factors related to the acceptance of evolution theory among Greek university students training to be teachers in early childhood education, using conceptual ecology for biological evolution as a theoretical framework. We examined the acceptance of evolution theory and we also looked into the relationship…

Advances for studying clonal evolution in cancer.

PubMed

Ding, Li; Raphael, Benjamin J; Chen, Feng; Wendl, Michael C

2013-11-01

The "clonal evolution" model of cancer emerged and "evolved" amid ongoing advances in technology, especially in recent years during which next generation sequencing instruments have provided ever higher resolution pictures of the genetic changes in cancer cells and heterogeneity in tumors. It has become increasingly clear that clonal evolution is not a single sequential process, but instead frequently involves simultaneous evolution of multiple subclones that co-exist because they are of similar fitness or are spatially separated. Co-evolution of subclones also occurs when they complement each other's survival advantages. Recent studies have also shown that clonal evolution is highly heterogeneous: different individual tumors of the same type may undergo very different paths of clonal evolution. New methodological advancements, including deep digital sequencing of a mixed tumor population, single cell sequencing, and the development of more sophisticated computational tools, will continue to shape and reshape the models of clonal evolution. In turn, these will provide both an improved framework for the understanding of cancer progression and a guide for treatment strategies aimed at the elimination of all, rather than just some, of the cancer cells within a patient. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Nature vs Nurture: Effects of Learning on Evolution

NASA Astrophysics Data System (ADS)

Nagrani, Nagina

In the field of Evolutionary Robotics, the design, development and application of artificial neural networks as controllers have derived their inspiration from biology. Biologists and artificial intelligence researchers are trying to understand the effects of neural network learning during the lifetime of the individuals on evolution of these individuals by qualitative and quantitative analyses. The conclusion of these analyses can help develop optimized artificial neural networks to perform any given task. The purpose of this thesis is to study the effects of learning on evolution. This has been done by applying Temporal Difference Reinforcement Learning methods to the evolution of Artificial Neural Tissue controller. The controller has been assigned the task to collect resources in a designated area in a simulated environment. The performance of the individuals is measured by the amount of resources collected. A comparison has been made between the results obtained by incorporating learning in evolution and evolution alone. The effects of learning parameters: learning rate, training period, discount rate, and policy on evolution have also been studied. It was observed that learning delays the performance of the evolving individuals over the generations. However, the non zero learning rate throughout the evolution process signifies natural selection preferring individuals possessing plasticity.

Gross Motor Function Measure Evolution Ratio: Use as a Control for Natural Progression in Cerebral Palsy.

PubMed

Marois, Pierre; Marois, Mikael; Pouliot-Laforte, Annie; Vanasse, Michel; Lambert, Jean; Ballaz, Laurent

2016-05-01

To develop a new way to interpret Gross Motor Function Measure (GMFM-66) score improvement in studies conducted without control groups in children with cerebral palsy (CP). The curves, which describe the pattern of motor development according to the children's Gross Motor Function Classification System level, were used as historical control to define the GMFM-66 expected natural evolution in children with CP. These curves have been modeled and generalized to fit the curve to particular children characteristics. Research center. Not applicable. Not applicable. Not applicable. Assuming that the GMFM-66 score evolution followed the shape of the Rosenbaum curves, by taking into account the age and GMFM-66 score of children, the expected natural evolution of the GMFM-66 score was predicted for any group of children with CP who were <8 years old. Because the expected natural evolution could be predicted for a specific group of children with CP, the efficacy of a treatment could be determined by comparing the GMFM-66 score evolution measured before and after treatment with the expected natural evolution for the same period. A new index, the Gross Motor Function Measure Evolution Ratio, was defined as follows: Gross Motor Function Measure Evolution Ratio=measured GMFM-66 score change/expected natural evolution. For practical or ethical reasons, it is almost impossible to use control groups in studies evaluating effectiveness of many therapeutic modalities. The Gross Motor Function Measure Evolution Ratio gives the opportunity to take into account the expected natural evolution of the gross motor function of children with CP, which is essential to accurately interpret the therapy effect on the GMFM-66. Copyright © 2016 American Congress of Rehabilitation Medicine. Published by Elsevier Inc. All rights reserved.

The evolution, morphology, and development of fern leaves

PubMed Central

Vasco, Alejandra; Moran, Robbin C.; Ambrose, Barbara A.

2013-01-01

Leaves are lateral determinate structures formed in a predictable sequence (phyllotaxy) on the flanks of an indeterminate shoot apical meristem. The origin and evolution of leaves in vascular plants has been widely debated. Being the main conspicuous organ of nearly all vascular plants and often easy to recognize as such, it seems surprising that leaves have had multiple origins. For decades, morphologists, anatomists, paleobotanists, and systematists have contributed data to this debate. More recently, molecular genetic studies have provided insight into leaf evolution and development mainly within angiosperms and, to a lesser extent, lycophytes. There has been recent interest in extending leaf evolutionary developmental studies to other species and lineages, particularly in lycophytes and ferns. Therefore, a review of fern leaf morphology, evolution and development is timely. Here we discuss the theories of leaf evolution in ferns, morphology, and diversity of fern leaves, and experimental results of fern leaf development. We summarize what is known about the molecular genetics of fern leaf development and what future studies might tell us about the evolution of fern leaf development. PMID:24027574

Lineage diversification and morphological evolution in a large-scale continental radiation: the neotropical ovenbirds and woodcreepers (aves: Furnariidae).

PubMed

Derryberry, Elizabeth P; Claramunt, Santiago; Derryberry, Graham; Chesser, R Terry; Cracraft, Joel; Aleixo, Alexandre; Pérez-Emán, Jorge; Remsen, J V; Brumfield, Robb T

2011-10-01

Patterns of diversification in species-rich clades provide insight into the processes that generate biological diversity. We tested different models of lineage and phenotypic diversification in an exceptional continental radiation, the ovenbird family Furnariidae, using the most complete species-level phylogenetic hypothesis produced to date for a major avian clade (97% of 293 species). We found that the Furnariidae exhibit nearly constant rates of lineage accumulation but show evidence of constrained morphological evolution. This pattern of sustained high rates of speciation despite limitations on phenotypic evolution contrasts with the results of most previous studies of evolutionary radiations, which have found a pattern of decelerating diversity-dependent lineage accumulation coupled with decelerating or constrained phenotypic evolution. Our results suggest that lineage accumulation in tropical continental radiations may not be as limited by ecological opportunities as in temperate or island radiations. More studies examining patterns of both lineage and phenotypic diversification are needed to understand the often complex tempo and mode of evolutionary radiations on continents. © 2011 The Author(s). Evolution© 2011 The Society for the Study of Evolution.

Adaptive laboratory evolution – principles and applications for biotechnology

PubMed Central

2013-01-01

Adaptive laboratory evolution is a frequent method in biological studies to gain insights into the basic mechanisms of molecular evolution and adaptive changes that accumulate in microbial populations during long term selection under specified growth conditions. Although regularly performed for more than 25 years, the advent of transcript and cheap next-generation sequencing technologies has resulted in many recent studies, which successfully applied this technique in order to engineer microbial cells for biotechnological applications. Adaptive laboratory evolution has some major benefits as compared with classical genetic engineering but also some inherent limitations. However, recent studies show how some of the limitations may be overcome in order to successfully incorporate adaptive laboratory evolution in microbial cell factory design. Over the last two decades important insights into nutrient and stress metabolism of relevant model species were acquired, whereas some other aspects such as niche-specific differences of non-conventional cell factories are not completely understood. Altogether the current status and its future perspectives highlight the importance and potential of adaptive laboratory evolution as approach in biotechnological engineering. PMID:23815749

Office of exploration overview

NASA Technical Reports Server (NTRS)

Alred, John

1989-01-01

The NASA Office of Exploration case studies for FY89 are reviewed with regard to study ground rules and constraints. Three study scenarios are presented: lunar evolution, Mars evolution, and Mars expedition with emphasis on the key mission objectives.

Information-theoretic metamodel of organizational evolution

NASA Astrophysics Data System (ADS)

Sepulveda, Alfredo

2011-12-01

Social organizations are abstractly modeled by holarchies---self-similar connected networks---and intelligent complex adaptive multiagent systems---large networks of autonomous reasoning agents interacting via scaled processes. However, little is known of how information shapes evolution in such organizations, a gap that can lead to misleading analytics. The research problem addressed in this study was the ineffective manner in which classical model-predict-control methods used in business analytics attempt to define organization evolution. The purpose of the study was to construct an effective metamodel for organization evolution based on a proposed complex adaptive structure---the info-holarchy. Theoretical foundations of this study were holarchies, complex adaptive systems, evolutionary theory, and quantum mechanics, among other recently developed physical and information theories. Research questions addressed how information evolution patterns gleamed from the study's inductive metamodel more aptly explained volatility in organization. In this study, a hybrid grounded theory based on abstract inductive extensions of information theories was utilized as the research methodology. An overarching heuristic metamodel was framed from the theoretical analysis of the properties of these extension theories and applied to business, neural, and computational entities. This metamodel resulted in the synthesis of a metaphor for, and generalization of organization evolution, serving as the recommended and appropriate analytical tool to view business dynamics for future applications. This study may manifest positive social change through a fundamental understanding of complexity in business from general information theories, resulting in more effective management.

Empirical approaches to the study of language evolution.

PubMed

Fitch, W Tecumseh

2017-02-01

The study of language evolution, and human cognitive evolution more generally, has often been ridiculed as unscientific, but in fact it differs little from many other disciplines that investigate past events, such as geology or cosmology. Well-crafted models of language evolution make numerous testable hypotheses, and if the principles of strong inference (simultaneous testing of multiple plausible hypotheses) are adopted, there is an increasing amount of relevant data allowing empirical evaluation of such models. The articles in this special issue provide a concise overview of current models of language evolution, emphasizing the testable predictions that they make, along with overviews of the many sources of data available to test them (emphasizing comparative, neural, and genetic data). The key challenge facing the study of language evolution is not a lack of data, but rather a weak commitment to hypothesis-testing approaches and strong inference, exacerbated by the broad and highly interdisciplinary nature of the relevant data. This introduction offers an overview of the field, and a summary of what needed to evolve to provide our species with language-ready brains. It then briefly discusses different contemporary models of language evolution, followed by an overview of different sources of data to test these models. I conclude with my own multistage model of how different components of language could have evolved.

Selection, constraint, and the evolution of coloration in African starlings.

PubMed

Maia, Rafael; Rubenstein, Dustin R; Shawkey, Matthew D

2016-05-01

Colorful plumage plays a prominent role in the evolution of birds, influencing communication (sexual/social selection), and crypsis (natural selection). Comparative studies have focused primarily on these selective pressures, but the mechanisms underlying color production can also be important by constraining the color gamut upon which selection acts. Iridescence is particularly interesting to study the interaction between selection and color-producing mechanisms because a broad range of colors can be produced with a shared template, and innovations to this template further expand this by increasing the parameters interacting to produce colors. We examine the patterns of ornamentation and dichromatism evolution in African starlings, a group remarkably diverse in color production mechanisms, social systems, and ecologies. We find that the presence of iridescence is ancestral to the group, being predominantly lost in females and cooperative breeders, as well as species with less labile templates. Color-producing mechanisms interact and are the main predictors of plumage ornamentation and elaboration, with little influence of selective pressures in their evolution. Dichromatism, however is influenced by social system and the loss of iridescence. Our results show the importance of considering both selection and constraints, and the different roles that they may have, in the evolution of ornamentation and dimorphism. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

The Evolution of Musicality: What Can Be Learned from Language Evolution Research?

PubMed Central

Ravignani, Andrea; Thompson, Bill; Filippi, Piera

2018-01-01

Language and music share many commonalities, both as natural phenomena and as subjects of intellectual inquiry. Rather than exhaustively reviewing these connections, we focus on potential cross-pollination of methodological inquiries and attitudes. We highlight areas in which scholarship on the evolution of language may inform the evolution of music. We focus on the value of coupled empirical and formal methodologies, and on the futility of mysterianism, the declining view that the nature, origins and evolution of language cannot be addressed empirically. We identify key areas in which the evolution of language as a discipline has flourished historically, and suggest ways in which these advances can be integrated into the study of the evolution of music. PMID:29467601

The Evolution of Musicality: What Can Be Learned from Language Evolution Research?

PubMed

Ravignani, Andrea; Thompson, Bill; Filippi, Piera

2018-01-01

Language and music share many commonalities, both as natural phenomena and as subjects of intellectual inquiry. Rather than exhaustively reviewing these connections, we focus on potential cross-pollination of methodological inquiries and attitudes. We highlight areas in which scholarship on the evolution of language may inform the evolution of music. We focus on the value of coupled empirical and formal methodologies, and on the futility of mysterianism , the declining view that the nature, origins and evolution of language cannot be addressed empirically. We identify key areas in which the evolution of language as a discipline has flourished historically, and suggest ways in which these advances can be integrated into the study of the evolution of music.

Disentangling the Correlated Evolution of Monogamy and Cooperation.

PubMed

Dillard, Jacqueline R; Westneat, David F

2016-07-01

Lifetime genetic monogamy, by increasing sibling relatedness, has been proposed as an important causal factor in the evolution of altruism. Monogamy, however, could influence the subsequent evolution of cooperation in other ways. We present several alternative, non-mutually exclusive, evolutionary processes that could explain the correlated evolution of monogamy and cooperation. Our analysis of these possibilities reveals that many ecological or social factors can affect all three variables of Hamilton's Rule simultaneously, thus calling for a more holistic, systems-level approach to studying the evolution of social traits. This perspective reveals novel dimensions to coevolutionary relationships and provides solutions for assigning causality in complex cases of correlated social trait evolution, such as the sequential evolution of monogamy and cooperation. Copyright © 2016 Elsevier Ltd. All rights reserved.

Without the Light of Evolution: A Case Study of Resistance and Avoidance in Learning to Teach High School Biology

ERIC Educational Resources Information Center

Larkin, Douglas B.; Perry-Ryder, Gail M.

2015-01-01

We present the case of Michael, a prospective high school biology teacher, to explore the implications of teacher resistance and avoidance to the topic of evolution. This case is drawn from a year-long qualitative research study that examined Michael's process of learning to teach high school biology and describes how his avoidance of evolution in…

A Topical Trajectory on Survival: An Analysis of Link-Making in a Sequence of Lessons on Evolution

ERIC Educational Resources Information Center

Rocksén, Miranda; Olander, Clas

2017-01-01

This study explores the concept of link-making in relation to communicative strategies applied in the teaching and studying of biological evolution. The analysis focused on video recordings of 11 lessons on biological evolution conducted in a Swedish 9th grade class of students aged 15 years. It reveals how the teacher and students connected…

Should We Add History of Science to Provide Nature of Science into Vietnamese Biology Textbook: A Case of Evolution and Genetics Teaching?

ERIC Educational Resources Information Center

Diem, Huynh Thi Thuy; Yuenyong, Chokchai

2018-01-01

History of science (HOS) plays a substantial role in the enhancement of rooted understanding in science teaching and learning. HOS of evolution and genetics has not been included in Vietnamese biology textbooks. This study aims to investigate the necessity of introducing evolution and genetics HOS into Vietnamese textbooks. A case study approach…

Stellar Parameters, Chemical composition and Models of chemical evolution

NASA Astrophysics Data System (ADS)

Mishenina, T.; Pignatari, M.; Côté, B.; Thielemann, F.-K.; Soubiran, C.; Basak, N.; Gorbaneva, T.; Korotin, S. A.; Kovtyukh, V. V.; Wehmeyer, B.; Bisterzo, S.; Travaglio, C.; Gibson, B. K.; Jordan, C.; Paul, A.; Ritter, C.; Herwig, F.

2018-04-01

We present an in-depth study of metal-poor stars, based high resolution spectra combined with newly released astrometric data from Gaia, with special attention to observational uncertainties. The results are compared to those of other studies, including Gaia benchmark stars. Chemical evolution models are discussed, highlighting few puzzles that are still affecting our understanding of stellar nucleosynthesis and of the evolution of our Galaxy.

Neutral null models for diversity in serial transfer evolution experiments.

PubMed

Harpak, Arbel; Sella, Guy

2014-09-01

Evolution experiments with microorganisms coupled with genome-wide sequencing now allow for the systematic study of population genetic processes under a wide range of conditions. In learning about these processes in natural, sexual populations, neutral models that describe the behavior of diversity and divergence summaries have played a pivotal role. It is therefore natural to ask whether neutral models, suitably modified, could be useful in the context of evolution experiments. Here, we introduce coalescent models for polymorphism and divergence under the most common experimental evolution assay, a serial transfer experiment. This relatively simple setting allows us to address several issues that could affect diversity patterns in evolution experiments, whether selection is operating or not: the transient behavior of neutral polymorphism in an experiment beginning from a single clone, the effects of randomness in the timing of cell division and noisiness in population size in the dilution stage. In our analyses and discussion, we emphasize the implications for experiments aimed at measuring diversity patterns and making inferences about population genetic processes based on these measurements. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

Character evolution and missing (morphological) data across the core asterids (Gentianidae)

USDA-ARS?s Scientific Manuscript database

Character evolution and missing (morphological) data across Asteridae. Premise of the study: Our current understanding of flowering plant phylogeny provides an excellent framework for exploring various aspects of character evolution through comparative analyses. However, attempts to synthesize this ...

Comparative Structural Models of Similarities and Differences between "Vehicle" and "Target" in Order to Teach Darwinian "Evolution"

ERIC Educational Resources Information Center

Marcelos, Maria Fatima; Nagem, Ronaldo L.

2010-01-01

Our objective is to contribute to the teaching of Classical Darwinian "Evolution" by means of a study of analogies and metaphors. Throughout the history of knowledge about "Evolution" and in Science teaching, tree structures have been used an analogs to refer to "Evolution," such as by Darwin in the "Tree of Life" passage contained in "On The…

MEVTV study: Early tectonic evolution of Mars: Crustal dichotomy to Valles Marineris

NASA Technical Reports Server (NTRS)

Frey, Herbert V.; Schultz, Richard A.

1990-01-01

Several fundamental problems were addressed in the early impact, tectonic, and volcanic evolution of the martian lithosphere: (1) origin and evolution of the fundamental crustal dichotomy, including development of the highland/lowland transition zone; (2) growth and evolution of the Valles Marineris; and (3) nature and role of major resurfacing events in early martian history. The results in these areas are briefly summarized.

Evolution--A Topic for Interdisciplinary Study.

ERIC Educational Resources Information Center

Stall, Pat; Keating, Joe

1990-01-01

Outlines an award-winning interdisciplinary unit of study (used in biology and English classrooms) that combines literature, mythology, religious history relating to origins, and Charles Darwin's theory of evolution. (RS)

Direct detection of male quality can facilitate the evolution of female choosiness and indicators of good genes: Evolution across a continuum of indicator mechanisms.

PubMed

Dhole, Sumit; Stern, Caitlin A; Servedio, Maria R

2018-04-01

The evolution of mating displays as indicators of male quality has been the subject of extensive theoretical and empirical research for over four decades. Research has also addressed the evolution of female mate choice favoring such indicators. Yet, much debate still exists about whether displays can evolve through the indirect benefits of female mate choice. Here, we use a population genetic model to investigate how the extent to which females can directly detect male quality influences the evolution of female choosiness and male displays. We use a continuum framework that incorporates indicator mechanisms that are traditionally modeled separately. Counter to intuition, we find that intermediate levels of direct detection of male quality can facilitate, rather than impede, the evolution of female choosiness and male displays in broad regions of this continuum. We examine how this evolution is driven by selective forces on genetic quality and on the display, and find that direct detection of male quality results in stronger indirect selection favoring female choosiness. Our results imply that displays maybe more likely to evolve when female choosiness has already evolved to discriminate perceptible forms of male quality. They also highlight the importance of considering general female choosiness, as well as preference, in studies of "good genes." © 2018 The Author(s). Evolution © 2018 The Society for the Study of Evolution.

Evolution, epigenetics and cooperation.

PubMed

Bateson, Patrick

2014-04-01

Explanations for biological evolution in terms of changes in gene frequencies refer to outcomes rather than process. Integrating epigenetic studies with older evolutionary theories has drawn attention to the ways in which evolution occurs. Adaptation at the level of the gene is givingway to adaptation at the level of the organism and higher-order assemblages of organisms. These ideas impact on the theories of how cooperation might have evolved. Two of the theories, i.e. that cooperating individuals are genetically related or that they cooperate for self-interested reasons, have been accepted for a long time. The idea that adaptation takes place at the level of groups is much more controversial. However, bringing together studies of development with those of evolution is taking away much of the heat in the debate about the evolution of group behaviour.

Teaching Evolution & the Nature of Science.

ERIC Educational Resources Information Center

Farber, Paul

2003-01-01

The theory of evolution provides direction in many fields, such as ecology, genetics, and embryology. Examines issues concerning the teaching of the subject in the United States. Presents a case study approach to teach about the nature of science using the theory of evolution. (SOE)

Star-Forming Regions in Orion as a Dust Evolution Laboratory

NASA Astrophysics Data System (ADS)

Wiebe, D.; Murga, M.; Sivkova, E.

2017-06-01

Star-forming regions (SFR) represent a convenient opportunity to study various processes related both to dust growth and to dust destruction. While extragalactic SFRs allow considering these processes in a wide range of metallicities, UV field intensities, etc., the Orion star-forming complex opens up a possibility to observe dust evolution with an unprecedented angular resolution. We review various observations related to dust evolution in some most prominent Orion regions, paying special attention to organic dust evolution, and introduce a new model of organic dust evolution.

Plasticity first: molecular signatures of a complex morphological trait in filamentous cyanobacteria.

PubMed

Koch, Robin; Kupczok, Anne; Stucken, Karina; Ilhan, Judith; Hammerschmidt, Katrin; Dagan, Tal

2017-08-31

Filamentous cyanobacteria that differentiate multiple cell types are considered the peak of prokaryotic complexity and their evolution has been studied in the context of multicellularity origins. Species that form true-branching filaments exemplify the most complex cyanobacteria. However, the mechanisms underlying the true-branching morphology remain poorly understood despite of several investigations that focused on the identification of novel genes or pathways. An alternative route for the evolution of novel traits is based on existing phenotypic plasticity. According to that scenario - termed genetic assimilation - the fixation of a novel phenotype precedes the fixation of the genotype. Here we show that the evolution of transcriptional regulatory elements constitutes a major mechanism for the evolution of new traits. We found that supplementation with sucrose reconstitutes the ancestral branchless phenotype of two true-branching Fischerella species and compared the transcription start sites (TSSs) between the two phenotypic states. Our analysis uncovers several orthologous TSSs whose transcription level is correlated with the true-branching phenotype. These TSSs are found in genes that encode components of the septosome and elongasome (e.g., fraC and mreB). The concept of genetic assimilation supplies a tenable explanation for the evolution of novel traits but testing its feasibility is hindered by the inability to recreate and study the evolution of present-day traits. We present a novel approach to examine transcription data for the plasticity first route and provide evidence for its occurrence during the evolution of complex colony morphology in true-branching cyanobacteria. Our results reveal a route for evolution of the true-branching phenotype in cyanobacteria via modification of the transcription level of pre-existing genes. Our study supplies evidence for the 'plasticity-first' hypothesis and highlights the importance of transcriptional regulation in the evolution of novel traits.

Evidence of correlated evolution and adaptive differentiation of stem and leaf functional traits in the herbaceous genus, Helianthus.

PubMed

Pilote, Alex J; Donovan, Lisa A

2016-12-01

Patterns of plant stem traits are expected to align with a "fast-slow" plant economic spectrum across taxa. Although broad patterns support such tradeoffs in field studies, tests of hypothesized correlated trait evolution and adaptive differentiation are more robust when taxa relatedness and environment are taken into consideration. Here we test for correlated evolution of stem and leaf traits and their adaptive differentiation across environments in the herbaceous genus, Helianthus. Stem and leaf traits of 14 species of Helianthus (28 populations) were assessed in a common garden greenhouse study. Phylogenetically independent contrasts were used to test for evidence of correlated evolution of stem hydraulic and biomechanical properties, correlated evolution of stem and leaf traits, and adaptive differentiation associated with source habitat environments. Among stem traits, there was evidence for correlated evolution of some hydraulic and biomechanical properties, supporting an expected tradeoff between stem theoretical hydraulic efficiency and resistance to bending stress. Population differentiation for suites of stem and leaf traits was found to be consistent with a "fast-slow" resource-use axis for traits related to water transport and use. Associations of population traits with source habitat characteristics supported repeated evolution of a resource-acquisitive "drought-escape" strategy in arid environments. This study provides evidence of correlated evolution of stem and leaf traits consistent with the fast-slow spectrum of trait combinations related to water transport and use along the stem-to-leaf pathway. Correlations of traits with source habitat characteristics further indicate that the correlated evolution is associated, at least in part, with adaptive differentiation of Helianthus populations among native habitats differing in climate. © 2016 Botanical Society of America.

The evolution of culture (or the lack thereof): mapping the conceptual space.

PubMed

Gadagkar, Raghavendra

2017-07-01

This short essay is based on a lecture that I gave at short notice on a subject in which I am by no means an expert. The combination of lack of expertise and time for preparation, created an unexpectedly unique opportunity for thinking outside the box. I decided not to try to read up (as there was no time in any case) but instead to organize the little that I already knew about cultural evolution in a systematic schema-I attempted to create a scaffolding, on which I could hang everything I knew about cultural evolution, and hopefully, everything I might ever discover about cultural evolution in the future. I considered three dimensions of the study of cultural evolution, namely (i) the phenomenon of cultural evolution, (ii) production of knowledge in the field of cultural evolution, and (iii) the consequences or applications of an understanding of the evolution of culture.

Mainstreaming Caenorhabditis elegans in experimental evolution.

PubMed

Gray, Jeremy C; Cutter, Asher D

2014-03-07

Experimental evolution provides a powerful manipulative tool for probing evolutionary process and mechanism. As this approach to hypothesis testing has taken purchase in biology, so too has the number of experimental systems that use it, each with its own unique strengths and weaknesses. The depth of biological knowledge about Caenorhabditis nematodes, combined with their laboratory tractability, positions them well for exploiting experimental evolution in animal systems to understand deep questions in evolution and ecology, as well as in molecular genetics and systems biology. To date, Caenorhabditis elegans and related species have proved themselves in experimental evolution studies of the process of mutation, host-pathogen coevolution, mating system evolution and life-history theory. Yet these organisms are not broadly recognized for their utility for evolution experiments and remain underexploited. Here, we outline this experimental evolution work undertaken so far in Caenorhabditis, detail simple methodological tricks that can be exploited and identify research areas that are ripe for future discovery.

Experimental Evolution with Caenorhabditis Nematodes

PubMed Central

Teotónio, Henrique; Estes, Suzanne; Phillips, Patrick C.; Baer, Charles F.

2017-01-01

The hermaphroditic nematode Caenorhabditis elegans has been one of the primary model systems in biology since the 1970s, but only within the last two decades has this nematode also become a useful model for experimental evolution. Here, we outline the goals and major foci of experimental evolution with C. elegans and related species, such as C. briggsae and C. remanei, by discussing the principles of experimental design, and highlighting the strengths and limitations of Caenorhabditis as model systems. We then review three exemplars of Caenorhabditis experimental evolution studies, underlining representative evolution experiments that have addressed the: (1) maintenance of genetic variation; (2) role of natural selection during transitions from outcrossing to selfing, as well as the maintenance of mixed breeding modes during evolution; and (3) evolution of phenotypic plasticity and its role in adaptation to variable environments, including host–pathogen coevolution. We conclude by suggesting some future directions for which experimental evolution with Caenorhabditis would be particularly informative. PMID:28592504

Modeling the Interrelationships among Pre-Service Science Teachers' Understanding and Acceptance of Evolution, Their Views on Nature of Science and Self-Efficacy Beliefs regarding Teaching Evolution

ERIC Educational Resources Information Center

Akyol, Gulsum; Tekkaya, Ceren; Sungur, Semra; Traynor, Anne

2012-01-01

This study proposed a path model of relationships among understanding and acceptance of evolution, views on nature of science, and self-efficacy beliefs regarding teaching evolution. A total of 415 pre-service science teachers completed a series of self-report instruments for the specified purpose. After the estimation of scale scores using…

Origin and evolution of planetary atmospheres

NASA Technical Reports Server (NTRS)

Pollack, J. B.; Yung, Y. L.

1980-01-01

The current understanding of the origin and evolution of the atmospheres of solar system objects is reviewed. Physical processes that control this evolution are described in an attempt to develop a set of general principles that can help guide studies of specific objects. Particular emphasis is placed on the planetary and satellite atmospheres of the inner solar system objects; current hypotheses on the origin and evolution of these objects are critically considered.

Evosystem Services: Rapid Evolution and the Provision of Ecosystem Services.

PubMed

Rudman, Seth M; Kreitzman, Maayan; Chan, Kai M A; Schluter, Dolph

2017-06-01

Evolution is recognized as the source of all organisms, and hence many ecosystem services. However, the role that contemporary evolution might play in maintaining and enhancing specific ecosystem services has largely been overlooked. Recent advances at the interface of ecology and evolution have demonstrated how contemporary evolution can shape ecological communities and ecosystem functions. We propose a definition and quantitative criteria to study how rapid evolution affects ecosystem services (here termed contemporary evosystem services) and present plausible scenarios where such services might exist. We advocate for the direct measurement of contemporary evosystem services to improve understanding of how changing environments will alter resource availability and human well-being, and highlight the potential utility of managing rapid evolution for future ecosystem services. Copyright © 2017 Elsevier Ltd. All rights reserved.

Experimental evolution and the dynamics of adaptation and genome evolution in microbial populations.

PubMed

Lenski, Richard E

2017-10-01

Evolution is an on-going process, and it can be studied experimentally in organisms with rapid generations. My team has maintained 12 populations of Escherichia coli in a simple laboratory environment for >25 years and 60 000 generations. We have quantified the dynamics of adaptation by natural selection, seen some of the populations diverge into stably coexisting ecotypes, described changes in the bacteria's mutation rate, observed the new ability to exploit a previously untapped carbon source, characterized the dynamics of genome evolution and used parallel evolution to identify the genetic targets of selection. I discuss what the future might hold for this particular experiment, briefly highlight some other microbial evolution experiments and suggest how the fields of experimental evolution and microbial ecology might intersect going forward.

What does convergent evolution mean? The interpretation of convergence and its implications in the search for limits to evolution

PubMed Central

Stayton, C. Tristan

2015-01-01

Convergent evolution is central to the study of life's evolutionary history. Researchers have documented the ubiquity of convergence and have used this ubiquity to make inferences about the nature of limits on evolution. However, these inferences are compromised by unrecognized inconsistencies in the definitions, measures, significance tests and inferred causes of convergent evolution. I review these inconsistencies and provide recommendations for standardizing studies of convergence. A fundamental dichotomy exists between definitions that describe convergence as a pattern and those that describe it as a pattern caused by a particular process. When this distinction is not acknowledged it becomes easy to assume that a pattern of convergence indicates that a particular process has been active, leading researchers away from alternative explanations. Convergence is not necessarily caused by limits to evolution, either adaptation or constraint; even substantial amounts of convergent evolution can be generated by a purely stochastic process. In the absence of null models, long lists of examples of convergent events do not necessarily indicate that convergence or any evolutionary process is ubiquitous throughout the history of life. Pattern-based definitions of convergence, coupled with quantitative measures and null models, must be applied before drawing inferences regarding large-scale limits to evolution. PMID:26640646

Environmental constraints and call evolution in torrent-dwelling frogs.

PubMed

Goutte, Sandra; Dubois, Alain; Howard, Samuel D; Marquez, Rafael; Rowley, Jodi J L; Dehling, J Maximilian; Grandcolas, Philippe; Rongchuan, Xiong; Legendre, Frédéric

2016-04-01

Although acoustic signals are important for communication in many taxa, signal propagation is affected by environmental properties. Strong environmental constraints should drive call evolution, favoring signals with greater transmission distance and content integrity in a given calling habitat. Yet, few empirical studies have verified this prediction, possibly due to a shortcoming in habitat characterization, which is often too broad. Here we assess the potential impact of environmental constraints on the evolution of advertisement call in four groups of torrent-dwelling frogs in the family Ranidae. We reconstruct the evolution of calling site preferences, both broadly categorized and at a finer scale, onto a phylogenetic tree for 148 species with five markers (∼3600 bp). We test models of evolution for six call traits for 79 species with regard to the reconstructed history of calling site preferences and estimate their ancestral states. We find that in spite of existing morphological constraints, vocalizations of torrent-dwelling species are most probably constrained by the acoustic specificities of torrent habitats and particularly their high level of ambient noise. We also show that a fine-scale characterization of calling sites allows a better perception of the impact of environmental constraints on call evolution. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

Adaptive evolution to novel predators facilitates the evolution of damselfly species range shifts.

PubMed

Siepielski, Adam M; Beaulieu, Jeremy M

2017-04-01

Most species have evolved adaptations to reduce the chances of predation. In many cases, adaptations to coexist with one predator generate tradeoffs in the ability to live with other predators. Consequently, the ability to live with one predator may limit the geographic distributions of species, such that adaptive evolution to coexist with novel predators may facilitate range shifts. In a case study with Enallagma damselflies, we used a comparative phylogenetic approach to test the hypothesis that adaptive evolution to live with a novel predator facilitates range size shifts. Our results suggest that the evolution of Enallagma shifting from living in ancestral lakes with fish as top predators, to living in lakes with dragonflies as predators, may have facilitated an increase in their range sizes. This increased range size likely arose because lakes with dragonflies were widespread, but unavailable as a habitat throughout much of the evolutionary history of Enallagma because they were historically maladapted to coexist with dragonfly predators. Additionally, the traits that have evolved as defenses against dragonflies also likely enhanced damselfly dispersal abilities. While many factors underlie the evolutionary history of species ranges, these results suggest a role for the evolution of predator-prey interactions. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

Phylogeny suggests nondirectional and isometric evolution of sexual size dimorphism in argiopine spiders.

PubMed

Cheng, Ren-Chung; Kuntner, Matjaž

2014-10-01

Sexual dimorphism describes substantial differences between male and female phenotypes. In spiders, sexual dimorphism research almost exclusively focuses on size, and recent studies have recovered steady evolutionary size increases in females, and independent evolutionary size changes in males. Their discordance is due to negative allometric size patterns caused by different selection pressures on male and female sizes (converse Rensch's rule). Here, we investigated macroevolutionary patterns of sexual size dimorphism (SSD) in Argiopinae, a global lineage of orb-weaving spiders with varying degrees of SSD. We devised a Bayesian and maximum-likelihood molecular species-level phylogeny, and then used it to reconstruct sex-specific size evolution, to examine general hypotheses and different models of size evolution, to test for sexual size coevolution, and to examine allometric patterns of SSD. Our results, revealing ancestral moderate sizes and SSD, failed to reject the Brownian motion model, which suggests a nondirectional size evolution. Contrary to predictions, male and female sizes were phylogenetically correlated, and SSD evolution was isometric. We interpret these results to question the classical explanations of female-biased SSD via fecundity, gravity, and differential mortality. In argiopines, SSD evolution may be driven by these or additional selection mechanisms, but perhaps at different phylogenetic scales. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

Fitting models of continuous trait evolution to incompletely sampled comparative data using approximate Bayesian computation.

PubMed

Slater, Graham J; Harmon, Luke J; Wegmann, Daniel; Joyce, Paul; Revell, Liam J; Alfaro, Michael E

2012-03-01

In recent years, a suite of methods has been developed to fit multiple rate models to phylogenetic comparative data. However, most methods have limited utility at broad phylogenetic scales because they typically require complete sampling of both the tree and the associated phenotypic data. Here, we develop and implement a new, tree-based method called MECCA (Modeling Evolution of Continuous Characters using ABC) that uses a hybrid likelihood/approximate Bayesian computation (ABC)-Markov-Chain Monte Carlo approach to simultaneously infer rates of diversification and trait evolution from incompletely sampled phylogenies and trait data. We demonstrate via simulation that MECCA has considerable power to choose among single versus multiple evolutionary rate models, and thus can be used to test hypotheses about changes in the rate of trait evolution across an incomplete tree of life. We finally apply MECCA to an empirical example of body size evolution in carnivores, and show that there is no evidence for an elevated rate of body size evolution in the pinnipeds relative to terrestrial carnivores. ABC approaches can provide a useful alternative set of tools for future macroevolutionary studies where likelihood-dependent approaches are lacking. © 2011 The Author(s). Evolution© 2011 The Society for the Study of Evolution.

Mapping biological ideas: Concept maps as knowledge integration tools for evolution education

NASA Astrophysics Data System (ADS)

Schwendimann, Beat Adrian

Many students leave school with a fragmented understanding of biology that does not allow them to connect their ideas to their everyday lives (Wandersee, 1989; Mintzes, Wandersee, & Novak, 1998; Mintzes, Wandersee, & Novak, 2000a). Understanding evolution ideas is seen as central to building an integrated knowledge of biology (Blackwell, Powell, & Dukes, 2003; Thagard & Findlay, 2010). However, the theory of evolution has been found difficult to understand as it incorporates a wide range of ideas from different areas (Bahar et al., 1999; Tsui & Treagust, 2003) and multiple interacting levels (Wilensky & Resnick, 1999; Duncan & Reiser, 2007; Hmelo-Silver et al., 2007). Research suggests that learners can hold a rich repertoire of co-existing alternative ideas of evolution (for example, Bishop & Anderson, 1990; Demastes, Good, & Peebles, 1996; Evans, 2008), especially of human evolution (for example, Nelson, 1986; Sinatra et al., 2003; Poling & Evans, 2004). Evolution ideas are difficult to understand because they often contradict existing alternative ideas (Mayr, 1982; Wolpert, 1994; Evans, 2008). Research suggests that understanding human evolution is a key to evolution education (for example, Blackwell et al., 2003; Besterman & Baggott la Velle, 2007). This dissertation research investigates how different concept mapping forms embedded in a collaborative technology-enhanced learning environment can support students' integration of evolution ideas using case studies of human evolution. Knowledge Integration (KI) (Linn et al., 2000; Linn et al., 2004) is used as the operational framework to explore concept maps as knowledge integration tools to elicit, add, critically distinguish, group, connect, and sort out alternative evolution ideas. Concept maps are a form of node-link diagram for organizing and representing connections between ideas as a semantic network (Novak & Gowin, 1984). This dissertation research describes the iterative development of a novel biology-specific form of concept map, called Knowledge Integration Map (KIM), which aims to help learners connect ideas across levels (for example, genotype and phenotype levels) towards an integrated understanding of evolution. Using a design-based research approach (Brown, 1992; Cobb et al., 2003), three iterative studies were implemented in ethically and economically diverse public high schools classrooms using the web-based inquiry science environment (WISE) (Linn et al., 2003; Linn et al., 2004). Study 1 investigates concept maps as generative assessment tools. Study 1A compares the concept map generation and critique process of biology novices and experts. Findings suggest that concept maps are sensitive to different levels of knowledge integration but require scaffolding and revision. Study 1B investigates the implementation of concept maps as summative assessment tools in a WISE evolution module. Results indicate that concept maps can reveal connections between students' alternative ideas of evolution. Study 2 introduces KIMs as embedded collaborative learning tools. After generating KIMs, student dyads revise KIMs through two different critique activities (comparison against an expert or peer generated KIM). Findings indicate that different critique activities can promote the use of different criteria for critique. Results suggest that the combination of generating and critiquing KIMs can support integrating evolution ideas but can be time-consuming. As time in biology classrooms is limited, study 3 distinguishes the learning effects from either generating or critiquing KIMs as more time efficient embedded learning tools. Findings suggest that critiquing KIMs can be more time efficient than generating KIMs. Using KIMs that include common alternative ideas for critique activities can create genuine opportunities for students to critically reflect on new and existing ideas. Critiquing KIMs can encourage knowledge integration by fostering self-monitoring of students' learning progress, identifying knowledge gaps, and distinguishing alternative evolution ideas. This dissertation research demonstrates that science instruction of complex topics, such as human evolution, can succeed through a combination of scaffolded inquiry activities using dynamic visualizations, explanation activities, and collaborative KIM activities. This research contributes to educational research and practice by describing ways to make KIMs effective and time efficient learning tools for evolution education. Supporting students' building of a more coherent understanding of core ideas of biology can foster their life-long interest and learning of science.

Region Evolution eXplorer - A tool for discovering evolution trends in ontology regions.

PubMed

Christen, Victor; Hartung, Michael; Groß, Anika

2015-01-01

A large number of life science ontologies has been developed to support different application scenarios such as gene annotation or functional analysis. The continuous accumulation of new insights and knowledge affects specific portions in ontologies and thus leads to their adaptation. Therefore, it is valuable to study which ontology parts have been extensively modified or remained unchanged. Users can monitor the evolution of an ontology to improve its further development or apply the knowledge in their applications. Here we present REX (Region Evolution eXplorer) a web-based system for exploring the evolution of ontology parts (regions). REX provides an analysis platform for currently about 1,000 versions of 16 well-known life science ontologies. Interactive workflows allow an explorative analysis of changing ontology regions and can be used to study evolution trends for long-term periods. REX is a web application providing an interactive and user-friendly interface to identify (un)stable regions in large life science ontologies. It is available at http://www.izbi.de/rex.

Organic chemical evolution

NASA Technical Reports Server (NTRS)

Chang, S.

1981-01-01

The course of organic chemical evolution preceding the emergence of life on earth is discussed based on evidence of processes occurring in interstellar space, the solar system and the primitive earth. Following a brief review of the equilibrium condensation model for the origin and evolution of the solar system, consideration is given to the nature and organic chemistry of interstellar clouds, comets, Jupiter, meteorites, Venus and Mars, and the prebiotic earth. Major issues to be resolved in the study of organic chemical evolution on earth are identified regarding condensation and accretion in the solar nebula, early geological evolution, the origin and evolution of the atmosphere, organic production rates, organic-inorganic interactions, environmental fluctuations, phase separation and molecular selectivity.

Evolution of complex dynamics

NASA Astrophysics Data System (ADS)

Wilds, Roy; Kauffman, Stuart A.; Glass, Leon

2008-09-01

We study the evolution of complex dynamics in a model of a genetic regulatory network. The fitness is associated with the topological entropy in a class of piecewise linear equations, and the mutations are associated with changes in the logical structure of the network. We compare hill climbing evolution, in which only mutations that increase the fitness are allowed, with neutral evolution, in which mutations that leave the fitness unchanged are allowed. The simple structure of the fitness landscape enables us to estimate analytically the rates of hill climbing and neutral evolution. In this model, allowing neutral mutations accelerates the rate of evolutionary advancement for low mutation frequencies. These results are applicable to evolution in natural and technological systems.

Earth Regime Network Evolution Study (ERNESt)

NASA Technical Reports Server (NTRS)

Menrad, Bob

2016-01-01

Speaker and Presenter at the Lincoln Laboratory Communications Workshop on April 5, 2016 at the Massachusetts Institute of Technology Lincoln Laboratory in Lexington, MA. A visual presentation titled Earth Regimes Network Evolution Study (ERNESt).

Radial variations of large-scale magnetohydrodynamic fluctuations in the solar wind

NASA Technical Reports Server (NTRS)

Burlaga, L. F.; Goldstein, M. L.

1983-01-01

Two time periods are studied for which comprehensive data coverage is available at both 1 AU using IMP-8 and ISEE-3 and beyond using Voyager 1. One of these periods is characterized by the predominance of corotating stream interactions. Relatively small scale transient flows characterize the second period. The evolution of these flows with heliocentric distance is studied using power spectral techniques. The evolution of the transient dominated period is consistent with the hypothesis of turbulent evolution including an inverse cascade of large scales. The evolution of the corotating period is consistent with the entrainment of slow streams by faster streams in a deterministic model.

Intratumoral heterogeneity and clonal evolution in blood malignancies and solid tumors.

PubMed

Varela, Ignacio; Menendez, Pablo; Sanjuan-Pla, Alejandra

2017-09-12

This meeting held at the University of Barcelona in March 2017, brought together scientists and clinicians worldwide to discuss current and future clinico-biological implications of intratumoral heterogeneity (ITH) and subclonal evolution in cancer diagnosis, patient stratification, and treatment resistance in diagnosis, treatment and follow-up. There was consensus that both longitudinal and tumor multi-region studies in matched samples are needed to better understand the dynamics of ITH. The contribution of the epigenome and microenvironment to ITH and subclone evolution remains understudied. It was recommended to combine computational, pathology and imaging tools to study the role of the microenvironment in subclone selection/evolution.

The Evolution of Haploid Chromosome Numbers in the Sunflower Family

PubMed Central

Mota, Lucie; Torices, Rubén; Loureiro, João

2016-01-01

Chromosome number changes during the evolution of angiosperms are likely to have played a major role in speciation. Their study is of utmost importance, especially now, as a probabilistic model is available to study chromosome evolution within a phylogenetic framework. In the present study, likelihood models of chromosome number evolution were fitted to the largest family of flowering plants, the Asteraceae. Specifically, a phylogenetic supertree of this family was used to reconstruct the ancestral chromosome number and infer genomic events. Our approach inferred that the ancestral chromosome number of the family is n = 9. Also, according to the model that best explained our data, the evolution of haploid chromosome numbers in Asteraceae was a very dynamic process, with genome duplications and descending dysploidy being the most frequent genomic events in the evolution of this family. This model inferred more than one hundred whole genome duplication events; however, it did not find evidence for a paleopolyploidization at the base of this family, which has previously been hypothesized on the basis of sequence data from a limited number of species. The obtained results and potential causes of these discrepancies are discussed. PMID:27797951

Current Status of Research in Teaching and Learning Evolution: I. Philosophical/Epistemological Issues

NASA Astrophysics Data System (ADS)

Smith, Mike U.

2010-06-01

Scholarship that addresses teaching and learning about evolution has rapidly increased in recent years. This review of that scholarship first addresses the philosophical/epistemological issues that impinge on teaching and learning about evolution, including the proper philosophical goals of evolution instruction; the correlational and possibly causal relationships among knowing, understanding, accepting, and believing; and the factors that affect student understanding, acceptance, and/or belief. Second, I summarize the specific epistemological issues involved, including empiricism, naturalism, philosophical vs methodological materialism, science vs religion as non-overlapping magisteria, and science as a way of knowing. Third, the paper critically reviews the strengths and weaknesses of the research tools available to measure the nature of science, epistemological beliefs, and especially the acceptance of evolution. Based on these findings, further research in these areas, especially study of the factors that cause lack of explanatory coherence as well as replications of studies that promise to explain current confusing findings about the interrelationships among student understanding, acceptance, and belief in evolution, are called for. In addition, this review calls for more longitudinal studies to delineate causal connections as well as improved measurement tools.

On the origin and early evolution of biological catalysis and other studies on chemical evolution

NASA Technical Reports Server (NTRS)

Oro, J.; Lazcano, A.

1991-01-01

One of the lines of research in molecular evolution which we have developed for the past three years is related to the experimental and theoretical study of the origin and early evolution of biological catalysis. In an attempt to understand the nature of the first peptidic catalysts and coenzymes, we have achieved the non-enzymatic synthesis of the coenzymes ADPG, GDPG, and CDP-ethanolamine, under conditions considered to have been prevalent on the primitive Earth. We have also accomplished the prebiotic synthesis of histidine, as well as histidyl-histidine, and we have measured the enhancing effects of this catalytic dipeptide on the dephosphorylation of deoxyribonucleotide monophosphates, the hydrolysis of oligo A, and the oligomerization 2', 3' cAMP. We reviewed and further developed the hypothesis that RNA preceded double stranded DNA molecules as a reservoir of cellular genetic information. This led us to undertake the study of extant RNA polymerases in an attempt to discover vestigial sequences preserved from early Archean times. In addition, we continued our studies of on the chemical evolution of organic compounds in the solar system and beyond.

Evaluation of advanced propulsion options for the next manned transportation system: Propulsion evolution study

NASA Technical Reports Server (NTRS)

Spears, L. T.; Kramer, R. D.

1990-01-01

The objectives were to examine launch vehicle applications and propulsion requirements for potential future manned space transportation systems and to support planning toward the evolution of Space Shuttle Main Engine (SSME) and Space Transportation Main Engine (STME) engines beyond their current or initial launch vehicle applications. As a basis for examinations of potential future manned launch vehicle applications, we used three classes of manned space transportation concepts currently under study: Space Transportation System Evolution, Personal Launch System (PLS), and Advanced Manned Launch System (AMLS). Tasks included studies of launch vehicle applications and requirements for hydrogen-oxygen rocket engines; the development of suggestions for STME engine evolution beyond the mid-1990's; the development of suggestions for STME evolution beyond the Advanced Launch System (ALS) application; the study of booster propulsion options, including LOX-Hydrocarbon options; the analysis of the prospects and requirements for utilization of a single engine configuration over the full range of vehicle applications, including manned vehicles plus ALS and Shuttle C; and a brief review of on-going and planned LOX-Hydrogen propulsion technology activities.

Molecular Evolution in Historical Perspective.

PubMed

Suárez-Díaz, Edna

2016-12-01

In the 1960s, advances in protein chemistry and molecular genetics provided new means for the study of biological evolution. Amino acid sequencing, nucleic acid hybridization, zone gel electrophoresis, and immunochemistry were some of the experimental techniques that brought about new perspectives to the study of the patterns and mechanisms of evolution. New concepts, such as the molecular evolutionary clock, and the discovery of unexpected molecular phenomena, like the presence of repetitive sequences in eukaryotic genomes, eventually led to the realization that evolution might occur at a different pace at the organismic and the molecular levels, and according to different mechanisms. These developments sparked important debates between defendants of the molecular and organismic approaches. The most vocal confrontations focused on the relation between primates and humans, and the neutral theory of molecular evolution. By the 1980s and 1990s, the construction of large protein and DNA sequences databases, and the development of computer-based statistical tools, facilitated the coming together of molecular and evolutionary biology. Although in its contemporary form the field of molecular evolution can be traced back to the last five decades, the field has deep roots in twentieth century experimental life sciences. For historians of science, the origins and consolidation of molecular evolution provide a privileged field for the study of scientific debates, the relation between technological advances and scientific knowledge, and the connection between science and broader social concerns.

Evidence of birth-and-death evolution of 5S rRNA gene in Channa species (Teleostei, Perciformes).

PubMed

Barman, Anindya Sundar; Singh, Mamta; Singh, Rajeev Kumar; Lal, Kuldeep Kumar

2016-12-01

In higher eukaryotes, minor rDNA family codes for 5S rRNA that is arranged in tandem arrays and comprises of a highly conserved 120 bp long coding sequence with a variable non-transcribed spacer (NTS). Initially the 5S rDNA repeats are considered to be evolved by the process of concerted evolution. But some recent reports, including teleost fishes suggested that evolution of 5S rDNA repeat does not fit into the concerted evolution model and evolution of 5S rDNA family may be explained by a birth-and-death evolution model. In order to study the mode of evolution of 5S rDNA repeats in Perciformes fish species, nucleotide sequence and molecular organization of five species of genus Channa were analyzed in the present study. Molecular analyses revealed several variants of 5S rDNA repeats (four types of NTS) and networks created by a neighbor net algorithm for each type of sequences (I, II, III and IV) did not show a clear clustering in species specific manner. The stable secondary structure is predicted and upstream and downstream conserved regulatory elements were characterized. Sequence analyses also shown the presence of two putative pseudogenes in Channa marulius. Present study supported that 5S rDNA repeats in genus Channa were evolved under the process of birth-and-death.

ISSOL Meeting, 7th, Barcelona, Spain, July 4-9, 1993. [Abstracts only

NASA Technical Reports Server (NTRS)

Ferris, James P. (Editor)

1994-01-01

The journal issue consists of abstracts presented at the International Society for the Study of the Origins of Life (ISSOL) conference. Topics include research on biological and chemical evolution including prebiotic evolution: cosmic and terrestrial; mechanisms of abiogenesis including synthesis and reactions of biomonomers; and analysis of cometary matter and its possible relationship to organic compounds on Earth. Theories and research on origins of ribonucleic acids (RNA), deoxyribonucleic acid (DNA), and other amino acids and complex proteins including their autocatalysis, replication, and translation are presented. Abiotic synthesis of biopolymers, mechanisms of the Genetic Code, precellular membrane systems and energetics are considered. Earth planetary evolution including early microfossils and geochemical conditions and simulations to study these conditions are discussed. The role of chirality in precellular evolution and the taxonomy and phylogeny of very simple organisms are reported. Past and future explorations in exobiology and space research directed toward study of the origins of life and solar system evolution are described.

Student Visual Communication of Evolution

ERIC Educational Resources Information Center

Oliveira, Alandeom W.; Cook, Kristin

2017-01-01

Despite growing recognition of the importance of visual representations to science education, previous research has given attention mostly to verbal modalities of evolution instruction. Visual aspects of classroom learning of evolution are yet to be systematically examined by science educators. The present study attends to this issue by exploring…

The influence of pedagogical content knowledge (PCK) for teaching macroevolution on student outcomes in a general education biology course

NASA Astrophysics Data System (ADS)

Walter, Emily Marie

This study investigated the influence of pedagogical content knowledge (PCK) for teaching macroevolution on non-science majors' knowledge of macroevolution and evolution acceptance. The nature and sources of an experienced faculty member's PCK and instruction as enacted PCK (Park & Oliver, 2008) were examined to consider the influence of these components on students' knowledge of macroevolution and evolution acceptance. The study used a mixed methods approach to understand how PCK influences student outcomes, and is one of the first to examine the influence of PCK on student outcomes at the post-secondary level. In addition, the study is one of few to document a significant relationship between knowledge of evolution and evolution acceptance, including how instruction influenced these outcomes. The case selected for study was a general education biology class: 270 students and their instructor. To examine the nature and sources of the instructor's PCK for teaching macroevolution, the course was observed in its entirety, the instructor was interviewed before, during, and after the evolution unit, and artifacts were collected from the evolution unit. Interview and observational protocols for the instructor were developed based on the Magnussson, Kracjik, & Borko (1999) model of PCK. The instructor was found to have deep knowledge of learners, and this knowledge in turn informed the other components of her PCK. Her knowledge of learners was built through reflecting on student exam outcomes, referencing the pedagogical literature, interactions with students, and discussions with colleagues. These findings have implications for faculty professional development. The influence of the course was examined both quantitatively and qualitatively. Students were surveyed using the Measure of Understanding of Macroevolution (Nadelson & Southerland, 2010a) the Measure of Acceptance of the Theory of Evolution (Rutledge & Warden, 1999, 2007). From pre- to post-test, students became significantly more accepting of evolution (p < .0001) and made significant gains in understanding macroevolution ( p < .0001). Knowledge of macroevolution and evolution acceptance were also significantly correlated (r[268] = .47, p < .01). Twelve students initially scoring low on both instruments also interviewed to examine how the instruction influenced their responses on the instruments. Nine of the students became more accepting of evolution, which they attributed to learning about the volume of evidence for evolution (especially transitional fossils) and learning about the history of life. These findings have important implications for evolution education policy and practice at the post-secondary level.

Integrative studies of cultural evolution: crossing disciplinary boundaries to produce new insights

PubMed Central

2018-01-01

Culture evolves according to dynamics on multiple temporal scales, from individuals' minute-by-minute behaviour to millennia of cultural accumulation that give rise to population-level differences. These dynamics act on a range of entities—including behavioural sequences, ideas and artefacts as well as individuals, populations and whole species—and involve mechanisms at multiple levels, from neurons in brains to inter-population interactions. Studying such complex phenomena requires an integration of perspectives from a diverse array of fields, as well as bridging gaps between traditionally disparate areas of study. In this article, which also serves as an introduction to the current special issue, we highlight some specific respects in which the study of cultural evolution has benefited and should continue to benefit from an integrative approach. We showcase a number of pioneering studies of cultural evolution that bring together numerous disciplines. These studies illustrate the value of perspectives from different fields for understanding cultural evolution, such as cognitive science and neuroanatomy, behavioural ecology, population dynamics, and evolutionary genetics. They also underscore the importance of understanding cultural processes when interpreting research about human genetics, neuroscience, behaviour and evolution. This article is part of the theme issue ‘Bridging cultural gaps: interdisciplinary studies in human cultural evolution’. PMID:29440515

Understanding Patterns of Evolution Acceptance--A New Implementation of the Measure of Acceptance of the Theory of Evolution (MATE) with Midwestern University Students

ERIC Educational Resources Information Center

Romine, William L.; Walter, Emily M.; Bosse, Ephiram; Todd, Amber N.

2017-01-01

We validate the Measure of Acceptance of the Theory of Evolution (MATE) on undergraduate students using the Rasch model and utilize the MATE to explore qualitatively how students express their acceptance of evolution. At least 24 studies have used the MATE, most with the assumption that it is unidimensional. However, we found that the MATE is best…

Physical observations of comets: Their composition, origin and evolution

NASA Technical Reports Server (NTRS)

Cochran, Anita L.; Barker, Edwin S.; Cochran, William D.

1991-01-01

The composition, origins, and evolution of comets were studied. The composition was studied using spectroscopic observations of primarily brighter comets at moderate and high resolution for the distribution of certain gases in the coma. The origins was addressed through an imaging search for the Kuiper belt of comets. The evolution was addressed by searching for a link between comets and asteroids using an imaging approach to search for an OH coma.

Proponents of Creationism but not Proponents of Evolution Frame the Origins Debate in Terms of Proof

NASA Astrophysics Data System (ADS)

Barnes, Ralph M.; Church, Rebecca A.

2013-03-01

In Study 1, 72 internet documents containing creationism, ID (intelligent design), or evolution content were selected for analysis. All instances of proof cognates (the word "proof" and related terms such as "proven", "disproof", etc.) contained within these documents were identified and labeled in terms of the manner in which the terms were used. In Study 2, frequency counts for six terms (proof, evidence, establish, experiment, test, trial) were conducted on a sample of peer-reviewed research articles in the journal Science and the 72 internet documents included in Study 1. Quantitative and qualitative analyses revealed that proponents of creationism were much more likely than proponents of evolution to frame the creationism/evolution issue in terms of proof (ID proponents fell partway between the other two). Proponents of creationism frequently described empirical data favoring their position as proof of their position. Even more frequently, proponents of creationism described evolutionary scientists as being engaged in failed attempts to prove the truth of the evolutionary position. Evolution documents included fewer proof cognates than creationism or ID documents and the few proof cognates found in evolution documents were rarely used to describe the status of the theory of evolution. Qualitative data analysis indicated that proof cognates were often used to indicate certainty. The asymmetry between evolution and creationism documents was limited primarily to proof cognates; there were no major asymmetries for the terms evidence, establish, experiment, test, and trial. The results may reveal differences in the epistemological commitments of the involved parties.

Evidence for adaptive radiation from a phylogenetic study of plant defenses

PubMed Central

Agrawal, Anurag A.; Fishbein, Mark; Halitschke, Rayko; Hastings, Amy P.; Rabosky, Daniel L.; Rasmann, Sergio

2009-01-01

One signature of adaptive radiation is a high level of trait change early during the diversification process and a plateau toward the end of the radiation. Although the study of the tempo of evolution has historically been the domain of paleontologists, recently developed phylogenetic tools allow for the rigorous examination of trait evolution in a tremendous diversity of organisms. Enemy-driven adaptive radiation was a key prediction of Ehrlich and Raven's coevolutionary hypothesis [Ehrlich PR, Raven PH (1964) Evolution 18:586–608], yet has remained largely untested. Here we examine patterns of trait evolution in 51 North American milkweed species (Asclepias), using maximum likelihood methods. We study 7 traits of the milkweeds, ranging from seed size and foliar physiological traits to defense traits (cardenolides, latex, and trichomes) previously shown to impact herbivores, including the monarch butterfly. We compare the fit of simple random-walk models of trait evolution to models that incorporate stabilizing selection (Ornstein-Ulenbeck process), as well as time-varying rates of trait evolution. Early bursts of trait evolution were implicated for 2 traits, while stabilizing selection was implicated for several others. We further modeled the relationship between trait change and species diversification while allowing rates of trait evolution to vary during the radiation. Species-rich lineages underwent a proportionately greater decline in latex and cardenolides relative to species-poor lineages, and the rate of trait change was most rapid early in the radiation. An interpretation of this result is that reduced investment in defensive traits accelerated diversification, and disproportionately so, early in the adaptive radiation of milkweeds. PMID:19805160

Social, moral, and temporal qualities: Pre-service teachers' considerations of evolution and creation

NASA Astrophysics Data System (ADS)

Hahn, Deirdre

The introduction of the theories of evolution into public education has created a history of misinterpretation and uncertainty about its application to understanding deep time and human origins. Conceptions about negative social and moral outcomes of evolution itself along with cognitive temporal constraints may be difficult for many individuals to uncouple from the scientific theory, serving to provoke the ongoing debate about the treatment of evolution in science education. This debate about teaching evolution is strongly influenced by groups who strive to add creationism to the science curriculum for a balanced treatment of human origins and to mediate implied negative social and moral outcomes of evolution. Individual conceptualization of evolution and creation may influence the choice of college students to teach science. This study is designed to examine if pre-service teachers' conceptualize an evolutionary and creationist process of human development using certain social, moral or temporal patterns; and if the patterns follow a negative conceptual theme. The pilot study explored 21 pre-service teachers' conceptual representation of an evolutionary process through personal narratives. Participants tended to link evolutionary changes with negative social and moral consequences and seemed to have difficulty envisioning change over time. The pilot study was expanded to include a quantitative examination of attribute patterns of an evolutionary and creationist developmental process. Seventy-three pre-service teachers participated in the second experiment and tended to fall evenly along a continuum of creationist and evolutionist beliefs about life. Using a chi-square and principle components analysis, participants were found to map concepts of evolution and creation onto each other using troubling attributes of development to distinguish negative change over time. A strong negative social and moral pattern of human development was found in the creation condition, though only a vague negative human developmental process was found for the evolution condition. Based on these results, pre-service teachers may not use evolution as a viable explanation of human origins, which may serve to contribute to evolution theory debates and discourage pre-service teachers' choice of being science instructors.

Relaxation of herbivore-mediated selection drives the evolution of genetic covariances between plant competitive and defense traits.

PubMed

Uesugi, Akane; Connallon, Tim; Kessler, André; Monro, Keyne

2017-06-01

Insect herbivores are important mediators of selection on traits that impact plant defense against herbivory and competitive ability. Although recent experiments demonstrate a central role for herbivory in driving rapid evolution of defense and competition-mediating traits, whether and how herbivory shapes heritable variation in these traits remains poorly understood. Here, we evaluate the structure and evolutionary stability of the G matrix for plant metabolites that are involved in defense and allelopathy in the tall goldenrod, Solidago altissima. We show that G has evolutionarily diverged between experimentally replicated populations that evolved in the presence versus the absence of ambient herbivory, providing direct evidence for the evolution of G by natural selection. Specifically, evolution in an herbivore-free habitat altered the orientation of G, revealing a negative genetic covariation between defense- and competition-related metabolites that is typically masked in herbivore-exposed populations. Our results may be explained by predictions of classical quantitative genetic theory, as well as the theory of acquisition-allocation trade-offs. The study provides compelling evidence that herbivory drives the evolution of plant genetic architecture. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

Tempo and mode of climatic niche evolution in Primates.

PubMed

Duran, Andressa; Pie, Marcio R

2015-09-01

Climatic niches have increasingly become a nexus in our understanding of a variety of ecological and evolutionary phenomena, from species distributions to latitudinal diversity gradients. Despite the increasing availability of comprehensive datasets on species ranges, phylogenetic histories, and georeferenced environmental conditions, studies on the evolution of climate niches have only begun to understand how niches evolve over evolutionary timescales. Here, using primates as a model system, we integrate recently developed phylogenetic comparative methods, species distribution patterns, and climatic data to explore primate climatic niche evolution, both among clades and over time. In general, we found that simple, constant-rate models provide a poor representation of how climatic niches evolve. For instance, there have been shifts in the rate of climatic niche evolution in several independent clades, particularly in response to the increasingly cooler climates of the past 10 My. Interestingly, rate accelerations greatly outnumbered rate decelerations. These results highlight the importance of considering more realistic evolutionary models that allow for the detection of heterogeneity in the tempo and mode of climatic niche evolution, as well as to infer possible constraining factors for species distributions in geographical space. © 2015 The Author(s). Evolution © 2015 The Society for the Study of Evolution.

Correlated evolution of migration and sexual dichromatism in the New World orioles (icterus).

PubMed

Friedman, Nicholas R; Hofmann, Christopher M; Kondo, Beatrice; Omland, Kevin E

2009-12-01

The evolution of sexual dimorphism has long been attributed to sexual selection, specifically as it would drive repeated gains of elaborate male traits. In contrast to this pattern, New World oriole species all exhibit elaborate male plumage, and the repeated gains of sexual dichromatism observed in the genus are due to losses of female elaboration. Interestingly, most sexually dichromatic orioles belong to migratory or temperate-breeding clades. Using character scoring and ancestral state reconstructions from two recent studies in Icterus, we tested a hypothesis of correlated evolution between migration and sexual dichromatism. We employed two discrete phylogenetic comparative approaches: the concentrated changes test and Pagel's discrete likelihood test. Our results show that the evolution of these traits is significantly correlated (CCT: uncorrected P < 0.05; ML: LRT = 12.470, P < 0.005). Indeed, our best model of character evolution suggests that gains of sexual dichromatism are 23 times more likely to occur in migratory taxa. This study demonstrates that a life-history trait with no direct relationship with sexual selection has a strong influence on the evolution of sexual dichromatism. We recommend that researchers further investigate the role of selection on elaborate female traits in the evolution of sexual dimorphism.

Advances for Studying Clonal Evolution in Cancer

PubMed Central

Raphael, Benjamin J.; Chen, Feng; Wendl, Michael C.

2013-01-01

The “clonal evolution” model of cancer emerged and “evolved” amid ongoing advances in technology, especially in recent years during which next generation sequencing instruments have provided ever higher resolution pictures of the genetic changes in cancer cells and heterogeneity in tumors. It has become increasingly clear that clonal evolution is not a single sequential process, but instead frequently involves simultaneous evolution of multiple subclones that co-exist because they are of similar fitness or are spatially separated. Co-evolution of subclones also occurs when they complement each other’s survival advantages. Recent studies have also shown that clonal evolution is highly heterogeneous: different individual tumors of the same type may undergo very different paths of clonal evolution. New methodological advancements, including deep digital sequencing of a mixed tumor population, single cell sequencing, and the development of more sophisticated computational tools, will continue to shape and reshape the models of clonal evolution. In turn, these will provide both an improved framework for the understanding of cancer progression and a guide for treatment strategies aimed at the elimination of all, rather than just some, of the cancer cells within a patient. PMID:23353056

Adaptability and evolution.

PubMed

Bateson, Patrick

2017-10-06

The capacity of organisms to respond in their own lifetimes to new challenges in their environments probably appeared early in biological evolution. At present few studies have shown how such adaptability could influence the inherited characteristics of an organism's descendants. In part, this has been because organisms have been treated as passive in evolution. Nevertheless, their effects on biological evolution are likely to have been important and, when they occurred, accelerated the pace of evolution. Ways in which this might have happened have been suggested many times since the 1870s. I review these proposals and discuss their relevance to modern thought.

Student Visual Communication of Evolution

NASA Astrophysics Data System (ADS)

Oliveira, Alandeom W.; Cook, Kristin

2017-06-01

Despite growing recognition of the importance of visual representations to science education, previous research has given attention mostly to verbal modalities of evolution instruction. Visual aspects of classroom learning of evolution are yet to be systematically examined by science educators. The present study attends to this issue by exploring the types of evolutionary imagery deployed by secondary students. Our visual design analysis revealed that students resorted to two larger categories of images when visually communicating evolution: spatial metaphors (images that provided a spatio-temporal account of human evolution as a metaphorical "walk" across time and space) and symbolic representations ("icons of evolution" such as personal portraits of Charles Darwin that simply evoked evolutionary theory rather than metaphorically conveying its conceptual contents). It is argued that students need opportunities to collaboratively critique evolutionary imagery and to extend their visual perception of evolution beyond dominant images.

Evolution across the Curriculum: Microbiology

PubMed Central

Burmeister, Alita R.; Smith, James J.

2016-01-01

An integrated understanding of microbiology and evolutionary biology is essential for students pursuing careers in microbiology and healthcare fields. In this Perspective, we discuss the usefulness of evolutionary concepts and an overall evolutionary framework for students enrolled in microbiology courses. Further, we propose a set of learning goals for students studying microbial evolution concepts. We then describe some barriers to microbial evolution teaching and learning and encourage the continued incorporation of evidence-based teaching practices into microbiology courses at all levels. Next, we review the current status of microbial evolution assessment tools and describe some education resources available for teaching microbial evolution. Successful microbial evolution education will require that evolution be taught across the undergraduate biology curriculum, with a continued focus on applications and applied careers, while aligning with national biology education reform initiatives. Journal of Microbiology & Biology Education PMID:27158306

Diversity of Students' Beliefs about Biological Evolution

ERIC Educational Resources Information Center

Clores, Michael A.; Limjap, Auxencia A.

2006-01-01

The purpose of this study was to determine the beliefs about biological evolution held by college freshman students in one Catholic university in the Philippines. After 4 weeks of constructivist-inspired instruction, interviews and journal entries revealed that the students have diverse beliefs about the theory of evolution. They posited…

Framing Evolution Discussion Intellectually

ERIC Educational Resources Information Center

Oliveira, Alandeom W.; Cook, Kristin; Buck, Gayle A.

2011-01-01

This study examines how a first-year biology teacher facilitates a series of whole-class discussions about evolution during the implementation of a problem-based unit. A communicative theoretical perspective is adopted wherein evolution discussions are viewed as social events that the teacher can frame intellectually (i.e., present or organize as…

Teaching Evolution: A Heuristic Study of Personal and Cultural Dissonance

ERIC Educational Resources Information Center

Grimes, Larry G.

2012-01-01

Darwinian evolution is a robustly supported scientific theory. Yet creationists continue to challenge its teaching in American public schools. Biology teachers in all 50 states are responsible for teaching science content standards that include evolution. As products of their backgrounds and affiliations teachers bring personal attitudes and…

Biology Teachers' Professional Development Needs for Teaching Evolution

ERIC Educational Resources Information Center

Friedrichsen, Patricia J.; Linke, Nicholas; Barnett, Ellen

2016-01-01

The social controversy surrounding the teaching of evolution puts pressure on secondary biology teachers to deemphasize or omit evolution from their curriculum. In this growing pressure, professional development can offer support to biology teachers. In this study, we surveyed secondary biology teachers in Missouri and report the data from…

Tuition vs. Intuition: Effects of Instruction on Naive Theories of Evolution

ERIC Educational Resources Information Center

Shtulman, Andrew; Calabi, Prassede

2013-01-01

Recent research suggests that a major obstacle to evolution understanding is an essentialist view of the biological world. The present study investigated the effects of formal biology instruction on such misconceptions. Participants (N = 291) completed an assessment of their understanding of six aspects of evolution (variation, inheritance,…

Muslim Egyptian and Lebanese Students' Conceptions of Biological Evolution

ERIC Educational Resources Information Center

BouJaoude, Saouma; Wiles, Jason R.; Asghar, Anila; Alters, Brian

2011-01-01

In this study, we investigated distinctions among the diversity of religious traditions represented by Lebanese and Egyptian Muslim high school students regarding their understanding and acceptance of biological evolution and how they relate the science to their religious beliefs. We explored secondary students' conceptions of evolution among…

Measuring and Understanding Public Opinion on Human Evolution

ERIC Educational Resources Information Center

Gwon, Misook

2012-01-01

The theory of evolution has long generated controversy in American society, but Americans' attitudes about human evolution are often neglected in studies of "culture wars" and the nature of mass belief systems more generally (Berkman and Plutzer 2010; Freeland and Houston 2009). Gallup and other survey organizations have polled…

Cybersecurity Dynamics

DTIC Science & Technology

2014-08-20

of Cybersecurity Dynamics emerged. Intuitively, Cybersecurity Dynamics describes the evolution of cybersecurity state as caused by cyber attack...Dynamics emerged. Intuitively, Cybersecurity Dynamics describes the evolution of cybersecurity state as caused by cyber attack-defense interactions...evolution of cyberse- curity state as caused by cyber attack-defense interactions. By studying Cybersecurity Dynamics, we can characterize the

The evolution of plant virus transmission pathways

Treesearch

Frédéric M. Hamelin; Linda J.S. Allen; Holly R. Prendeville; M. Reza Hajimorad; Michael J. Jeger

2016-01-01

The evolution of plant virus transmission pathways is studied through transmission via seed, pollen, oravector. We address the questions: under what circumstances does vector transmission make pollen transmission redundant? Can evolution lead to the coexistence of multiple virus transmission pathways? We restrict the analysis to an annual plant population in which...

Evolution Education in Policy and Practice: An Ethnographic Perspective

ERIC Educational Resources Information Center

Long, David E.

2012-01-01

Evolution education in the US is conducted unevenly, or in cases is absent. Showing the strength of ethnography as a means of deeper explication in science education, this article explores the interactions of policy and practice in evolution education. Discussing vignettes from a larger ethnographic study, Creationist rationales and practices…

Teaching Evolution: From SMART Objectives to Threshold Experience

ERIC Educational Resources Information Center

Wolf, Alexander; Akkaraju, Shylaja

2014-01-01

Despite the centrality of evolution to the study of biology, the pedagogical methods employed to teach the subject are often instructor-centered and rarely embedded in every topic throughout the curriculum. In addition, students' prior beliefs about evolution are often dismissed rather than incorporated into the classroom. In this article we…

Pulse Shape Evolution, HER X-1

NASA Technical Reports Server (NTRS)

VanParadijs, Johannes A.

1998-01-01

This study focuses on the pulse shape evolution and spectral properties of the X-ray binary Her X-1 with regard to the well known 35-day cycle of Her X-1. A follow-up set of RXTE observations has been conducted in RXTE AO-2 phase and the two observation sets are being analyzed together. We presented results of early analysis of pulse shape evolution in "Proceedings of the Fourth Compton Symposium." More advanced analysis was presented at the HEAD meeting in November, 1997 in Estes Park, Colorado. A related study of the 35-day cycle using RXTE/ASM data, which laid out the overall picture within which the more detailed PCA observations could be placed has also been conducted. The results of this study have been published in The Astrophysical Journal, vol. 510, 974. A pair of papers on the detailed pulse evolution and the spectral/color evolution are currently being prepared for publication. Some of the significant results of this study have been a confirmation of the detailed pulse profile changes at the end of the Main High state in Her X-1 first observed by GINGA, observations of the pulse evolution in several Short High states which agree with the pulse evolution pattern predicted using a disk occultation model in the PhD Thesis of Scott 1993, observation of a systematic lengthening of the eclipse egress during the Main High state of the 35-day phase and observation of a new type of extended eclipse ingress during which pulsations cease to observed during the Short High state.

An AzTEC 1.1-mm survey for ULIRGs in the field of the Galaxy Cluster MS0451.6-0305

NASA Astrophysics Data System (ADS)

Wardlow, J. L.; Smail, Ian; Wilson, G. W.; Yun, M. S.; Coppin, K. E. K.; Cybulski, R.; Geach, J. E.; Ivison, R. J.; Aretxaga, I.; Austermann, J. E.; Edge, A. C.; Fazio, G. G.; Huang, J.; Hughes, D. H.; Kodama, T.; Kang, Y.; Kim, S.; Mauskopf, P. D.; Perera, T. A.; Scott, K. S.

2010-02-01

We have undertaken a deep (σ ~ 1.1 mJy) 1.1-mm survey of the z = 0.54 cluster MS0451.6-0305 using the AzTEC camera on the James Clerk Maxwell Telescope. We detect 36 sources with signal-to-noise ratio (S/N) >= 3.5 in the central 0.10 deg2 and present the AzTEC map, catalogue and number counts. We identify counterparts to 18 sources (50 per cent) using radio, mid-infrared, Spitzer InfraRed Array Camera (IRAC) and Submillimetre Array data. Optical, near- and mid-infrared spectral energy distributions are compiled for the 14 of these galaxies with detectable counterparts, which are expected to contain all likely cluster members. We then use photometric redshifts and colour selection to separate background galaxies from potential cluster members and test the reliability of this technique using archival observations of submillimetre galaxies. We find two potential MS0451-03 members, which, if they are both cluster galaxies, have a total star formation rate (SFR) of ~100Msolaryr-1 - a significant fraction of the combined SFR of all the other galaxies in MS0451-03. We also examine the stacked rest-frame mid-infrared, millimetre and radio emission of cluster members below our AzTEC detection limit, and find that the SFRs of mid-IR-selected galaxies in the cluster and redshift-matched field populations are comparable. In contrast, the average SFR of the morphologically classified late-type cluster population is nearly three times less than the corresponding redshift-matched field galaxies. This suggests that these galaxies may be in the process of being transformed on the red sequence by the cluster environment. Our survey demonstrates that although the environment of MS0451-03 appears to suppress star formation in late-type galaxies, it can support active, dust-obscured mid-IR galaxies and potentially millimetre-detected LIRGs.

HIFI Spectroscopy of H2O Submillimeter Lines in Nuclei of Actively Star-forming Galaxies

NASA Astrophysics Data System (ADS)

Liu, L.; Weiß, A.; Perez-Beaupuits, J. P.; Güsten, R.; Liu, D.; Gao, Y.; Menten, K. M.; van der Werf, P.; Israel, F. P.; Harris, A.; Martin-Pintado, J.; Requena-Torres, M. A.; Stutzki, J.

2017-09-01

We present a systematic survey of multiple velocity-resolved H2O spectra using Herschel/Heterodyne Instrument for the Far Infrared (HIFI) toward nine nearby actively star-forming galaxies. The ground-state and low-excitation lines (E up ≤ 130 K) show profiles with emission and absorption blended together, while absorption-free medium-excitation lines (130 K ≤ E up ≤ 350 K) typically display line shapes similar to CO. We analyze the HIFI observation together with archival SPIRE/PACS H2O data using a state-of-the-art 3D radiative transfer code that includes the interaction between continuum and line emission. The water excitation models are combined with information on the dust and CO spectral line energy distribution to determine the physical structure of the interstellar medium (ISM). We identify two ISM components that are common to all galaxies: a warm ({T}{dust}˜ 40{--}70 K), dense (n({{H}})˜ {10}5{--}{10}6 {{cm}}-3) phase that dominates the emission of medium-excitation H2O lines. This gas phase also dominates the far-IR emission and the CO intensities for {J}{up}> 8. In addition, a cold ({T}{dust}˜ 20{--}30 K), dense (n({{H}})˜ {10}4{--}{10}5 {{cm}}-3), more extended phase is present. It outputs the emission in the low-excitation H2O lines and typically also produces the prominent line absorption features. For the two ULIRGs in our sample (Arp 220 and Mrk 231) an even hotter and more compact (R s ≤ 100 pc) region is present, which is possibly linked to AGN activity. We find that collisions dominate the water excitation in the cold gas and for lines with {E}{up}≤slant 300 K and {E}{up}≤slant 800 K in the warm and hot component, respectively. Higher-energy levels are mainly excited by IR pumping.

The Dense Molecular Gas and Nuclear Activity in the ULIRG IRAS 13120–5453

DOE Office of Scientific and Technical Information (OSTI.GOV)

Privon, G. C.; Treister, E.; Aalto, S.

2017-02-01

We present new Atacama Large Millimeter/submillimeter Array Band 7 (∼340 GHz) observations of the dense gas tracers HCN, HCO{sup +}, and CS in the local, single-nucleus, ultraluminous infrared galaxy IRAS 13120–5453. We find centrally enhanced HCN (4–3) emission, relative to HCO{sup +} (4–3), but do not find evidence for radiative pumping of HCN. Considering the size of the starburst (0.5 kpc) and the estimated supernovae rate of ∼1.2 yr{sup −1}, the high HCN/HCO{sup +} ratio can be explained by an enhanced HCN abundance as a result of mechanical heating by the supernovae, though the active galactic nucleus and winds maymore » also contribute additional mechanical heating. The starburst size implies a high Σ{sub IR} of 4.7 × 10{sup 12} L {sub ⊙} kpc{sup −2}, slightly below predictions of radiation-pressure limited starbursts. The HCN line profile has low-level wings, which we tentatively interpret as evidence for outflowing dense molecular gas. However, the dense molecular outflow seen in the HCN line wings is unlikely to escape the Galaxy and is destined to return to the nucleus and fuel future star formation. We also present modeling of Herschel observations of the H{sub 2}O lines and find a nuclear dust temperature of ∼40 K. IRAS 13120–5453 has a lower dust temperature and Σ{sub IR} than is inferred for the systems termed “compact obscured nuclei (CONs)” (such as Arp 220 and Mrk 231). If IRAS 13120–5453 has undergone a CON phase, we are likely witnessing it at a time when the feedback has already inflated the nuclear ISM and diluted star formation in the starburst/active galactic nucleus core.« less

Imperfect information facilitates the evolution of reciprocity.

PubMed

Kurokawa, Shun

2016-06-01

The existence of cooperation demands explanation since cooperation is costly to the actor. Reciprocity has long been regarded as a potential explanatory mechanism for the existence of cooperation. Reciprocity is a mechanism wherein a cooperator responds to an opponent's behavior by switching his/her own behavior. Hence, a possible problematic case relevant to the theory of reciprocity evolution arises when the mechanism is such that the information regarding an opponent's behavior is imperfect. Although it has been confirmed also by previous theoretical studies that imperfect information interferes with the evolution of reciprocity, this argument is based on the assumption that there are no mistakes in behavior. And, a previous study presumed that it might be expected that when such mistakes occur, reciprocity can more readily evolve in the case of imperfect information than in the case of perfect information. The reason why the previous study considers so is that in the former case, reciprocators can miss defections incurred by other reciprocators' mistakes due to imperfect information, allowing cooperation to persist when such reciprocators meet. However, contrary to this expectation, the previous study has shown that even when mistakes occur, imperfect information interferes with the evolution of reciprocity. Nevertheless, the previous study assumed that payoffs are linear (i.e., that the effect of behavior is additive and there are no synergetic effects). In this study, we revisited the same problem but removed the assumption that payoffs are linear. We used evolutionarily stable strategy analysis to compare the condition for reciprocity to evolve when mistakes occur and information is imperfect with the condition for reciprocity to evolve when mistakes occur and information is perfect. Our study revealed that when payoffs are not linear, imperfect information can facilitate the evolution of reciprocity when mistakes occur; while when payoffs are linear, imperfect information disturbs the evolution of reciprocity even when mistakes occur. Imperfect information can encourage the evolution of cooperation. Copyright © 2016 Elsevier Inc. All rights reserved.

Evolution of motor innervation to vertebrate fins and limbs.

PubMed

Murakami, Yasunori; Tanaka, Mikiko

2011-07-01

The evolution and diversification of vertebrate behaviors associated with locomotion depend highly on the functional transformation of paired appendages. Although the evolution of fins into limbs has long been a focus of interest to scientists, the evolution of neural control during this transition has not received much attention. Recent studies have provided significant progress in the understanding of the genetic and developmental bases of the evolution of fin/limb motor circuitry in vertebrates. Here we compare the organization of the motor neurons in the spinal cord of various vertebrates. We also discuss recent advances in our understanding of these events and how they can provide a mechanistic explanation for the evolution of fin/limb motor circuitry in vertebrates. Copyright © 2011 Elsevier Inc. All rights reserved.

Science, religion, and society: the problem of evolution in America.

PubMed

Coyne, Jerry A

2012-08-01

American resistance to accepting evolution is uniquely high among First World countries. This is due largely to the extreme religiosity of the United States, which is much higher than that of comparably advanced nations, and to the resistance of many religious people to the facts and supposed implications of evolution. The prevalence of religious belief in the United States suggests that outreach by scientists alone will not have a huge effect in increasing the acceptance of evolution, nor will the strategy of trying to convince the faithful that evolution is compatible with their religion. Because creationism is a symptom of religion, another strategy to promote evolution involves loosening the grip of faith on America. This is easier said than done, for recent sociological surveys show that religion is highly correlated with the dysfunctionality of a society, and various measures of societal health show that the United States is one of the most socially dysfunctional First World countries. Widespread acceptance of evolution in America, then, may have to await profound social change. © 2012 The Author(s). Evolution© 2012 The Society for the Study of Evolution.

First steps in experimental cancer evolution

PubMed Central

Taylor, Tiffany B; Johnson, Louise J; Jackson, Robert W; Brockhurst, Michael A; Dash, Philip R

2013-01-01

Evolutionary processes play a central role in the development, progression and response to treatment of cancers. The current challenge facing researchers is to harness evolutionary theory to further our understanding of the clinical progression of cancers. Central to this endeavour will be the development of experimental systems and approaches by which theories of cancer evolution can be effectively tested. We argue here that the experimental evolution approach – whereby evolution is observed in real time and which has typically employed microorganisms – can be usefully applied to cancer. This approach allows us to disentangle the ecological causes of natural selection, identify the genetic basis of evolutionary changes and determine their repeatability. Cell cultures used in cancer research share many of the desirable traits that make microorganisms ideal for studying evolution. As such, experimental cancer evolution is feasible and likely to give great insight into the selective pressures driving the evolution of clinically destructive cancer traits. We highlight three areas of evolutionary theory with importance to cancer biology that are amenable to experimental evolution: drug resistance, social evolution and resource competition. Understanding the diversity, persistence and evolution of cancers is vital for treatment and drug development, and an experimental evolution approach could provide strategic directions and focus for future research. PMID:23745144

Earth Regimes Network Evolution Study (ERNESt): Introducing the Space Mobile Network

NASA Technical Reports Server (NTRS)

Menrad, Bob

2016-01-01

Speaker and Presenter at the Lincoln Laboratory Communications Workshop on April 5, 2016 at the Massachusetts Institute of Technology Lincoln Laboratory in Lexington, MA. A visual presentation titled Earth Regimes Network Evolution Study (ERNESt).

Genes involved in convergent evolution of eusociality in bees

PubMed Central

Woodard, S. Hollis; Fischman, Brielle J.; Venkat, Aarti; Hudson, Matt E.; Varala, Kranthi; Cameron, Sydney A.; Clark, Andrew G.; Robinson, Gene E.

2011-01-01

Eusociality has arisen independently at least 11 times in insects. Despite this convergence, there are striking differences among eusocial lifestyles, ranging from species living in small colonies with overt conflict over reproduction to species in which colonies contain hundreds of thousands of highly specialized sterile workers produced by one or a few queens. Although the evolution of eusociality has been intensively studied, the genetic changes involved in the evolution of eusociality are relatively unknown. We examined patterns of molecular evolution across three independent origins of eusociality by sequencing transcriptomes of nine socially diverse bee species and combining these data with genome sequence from the honey bee Apis mellifera to generate orthologous sequence alignments for 3,647 genes. We found a shared set of 212 genes with a molecular signature of accelerated evolution across all eusocial lineages studied, as well as unique sets of 173 and 218 genes with a signature of accelerated evolution specific to either highly or primitively eusocial lineages, respectively. These results demonstrate that convergent evolution can involve a mosaic pattern of molecular changes in both shared and lineage-specific sets of genes. Genes involved in signal transduction, gland development, and carbohydrate metabolism are among the most prominent rapidly evolving genes in eusocial lineages. These findings provide a starting point for linking specific genetic changes to the evolution of eusociality. PMID:21482769

Practices and Perspectives of College Instructors on Addressing Religious Beliefs When Teaching Evolution.

PubMed

Barnes, M Elizabeth; Brownell, Sara E

2016-01-01

Evolution is a core concept of biology, and yet many college biology students do not accept evolution because of their religious beliefs. However, we do not currently know how instructors perceive their role in helping students accept evolution or how they address the perceived conflict between religion and evolution when they teach evolution. This study explores instructor practices and beliefs related to mitigating students' perceived conflict between religion and evolution. Interviews with 32 instructors revealed that many instructors do not believe it is their goal to help students accept evolution and that most instructors do not address the perceived conflict between religion and evolution. Instructors cited many barriers to discussing religion in the context of evolution in their classes, most notably the instructors' own personal beliefs that religion and evolution may be incompatible. These data are exploratory and are intended to stimulate a series of questions about how we as college biology instructors teach evolution. © 2016 M. E. Barnes and S. E. Brownell. CBE—Life Sciences Education © 2016 The American Society for Cell Biology. This article is distributed by The American Society for Cell Biology under license from the author(s). It is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (http://creativecommons.org/licenses/by-nc-sa/3.0).

Genome-Wide Identification of Regulatory Sequences Undergoing Accelerated Evolution in the Human Genome.

PubMed

Dong, Xinran; Wang, Xiao; Zhang, Feng; Tian, Weidong

2016-10-01

Accelerated evolution of regulatory sequence can alter the expression pattern of target genes, and cause phenotypic changes. In this study, we used DNase I hypersensitive sites (DHSs) to annotate putative regulatory sequences in the human genome, and conducted a genome-wide analysis of the effects of accelerated evolution on regulatory sequences. Working under the assumption that local ancient repeat elements of DHSs are under neutral evolution, we discovered that ∼0.44% of DHSs are under accelerated evolution (ace-DHSs). We found that ace-DHSs tend to be more active than background DHSs, and are strongly associated with epigenetic marks of active transcription. The target genes of ace-DHSs are significantly enriched in neuron-related functions, and their expression levels are positively selected in the human brain. Thus, these lines of evidences strongly suggest that accelerated evolution on regulatory sequences plays important role in the evolution of human-specific phenotypes. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Globular-cluster stars - Results of theoretical evolution and pulsation studies compared with the observations.

NASA Technical Reports Server (NTRS)

Iben, I., Jr.

1971-01-01

Survey of recently published studies on globular clusters, and comparison of stellar evolution and pulsation theory with reported observations. The theory of stellar evolution is shown to be capable of describing, in principle, the behavior of a star through all quasi-static stages. Yet, as might be expected, estimates of bulk properties obtained by comparing observations with results of pulsation and stellar atmosphere theory differ somewhat from estimates of these same properties obtained by comparing observations with results of evolution theory. A description is given of how such estimates are obtained, and suggestions are offered as to where the weak points in each theory may lie.

Study of geometric phase using classical coupled oscillators

NASA Astrophysics Data System (ADS)

Bhattacharjee, Sharba; Dey, Biprateep; Mohapatra, Ashok K.

2018-05-01

We illustrate the geometric phase associated with the cyclic dynamics of a classical system of coupled oscillators. We use an analogy between a classical coupled oscillator and a two-state quantum mechanical system to represent the evolution of the oscillator on an equivalent Hilbert space, which may be represented as a trajectory on the surface of a sphere. The cyclic evolution of the system leads to a change in phase, which consists of a dynamic phase along with an additional phase shift dependent on the geometry of the evolution. A simple experiment suitable for advanced undergraduate students is designed to study the geometric phase incurred during cyclic evolution of a coupled oscillator.

Evolution of bacterial life-history traits is sensitive to community structure.

PubMed

Ketola, Tarmo; Mikonranta, Lauri; Mappes, Johanna

2016-06-01

Very few studies have experimentally assessed the evolutionary effects of species interactions within the same trophic level. Here we show that when Serratia marcescens evolve in multispecies communities, their growth rate exceeds the growth rate of the bacteria that evolved alone, whereas the biomass yield gets lower. In addition to the community effects per se, we found that few species in the communities caused strong effects on S. marcescens evolution. The results indicate that evolutionary responses (of a focal species) are different in communities, compared to species evolving alone. Moreover, selection can lead to very different outcomes depending on the community structure. Such context dependencies cast doubt on our ability to predict the course of evolution in the wild, where species often inhabit very different kinds of communities. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

Cancer in light of experimental evolution.

PubMed

Sprouffske, Kathleen; Merlo, Lauren M F; Gerrish, Philip J; Maley, Carlo C; Sniegowski, Paul D

2012-09-11

Cancer initiation, progression, and the emergence of therapeutic resistance are evolutionary phenomena of clonal somatic cell populations. Studies in microbial experimental evolution and the theoretical work inspired by such studies are yielding deep insights into the evolutionary dynamics of clonal populations, yet there has been little explicit consideration of the relevance of this rapidly growing field to cancer biology. Here, we examine how the understanding of mutation, selection, and spatial structure in clonal populations that is emerging from experimental evolution may be applicable to cancer. Along the way, we discuss some significant ways in which cancer differs from the model systems used in experimental evolution. Despite these differences, we argue that enhanced prediction and control of cancer may be possible using ideas developed in the context of experimental evolution, and we point out some prospects for future research at the interface between these traditionally separate areas. Copyright © 2012 Elsevier Ltd. All rights reserved.

Comparative methods for the analysis of gene-expression evolution: an example using yeast functional genomic data.

PubMed

Oakley, Todd H; Gu, Zhenglong; Abouheif, Ehab; Patel, Nipam H; Li, Wen-Hsiung

2005-01-01

Understanding the evolution of gene function is a primary challenge of modern evolutionary biology. Despite an expanding database from genomic and developmental studies, we are lacking quantitative methods for analyzing the evolution of some important measures of gene function, such as gene-expression patterns. Here, we introduce phylogenetic comparative methods to compare different models of gene-expression evolution in a maximum-likelihood framework. We find that expression of duplicated genes has evolved according to a nonphylogenetic model, where closely related genes are no more likely than more distantly related genes to share common expression patterns. These results are consistent with previous studies that found rapid evolution of gene expression during the history of yeast. The comparative methods presented here are general enough to test a wide range of evolutionary hypotheses using genomic-scale data from any organism.

Real-time divergent evolution in plants driven by pollinators

PubMed Central

Gervasi, Daniel D. L.; Schiestl, Florian P

2017-01-01

Pollinator-driven diversification is thought to be a major source of floral variation in plants. Our knowledge of this process is, however, limited to indirect assessments of evolutionary changes. Here, we employ experimental evolution with fast cycling Brassica rapa plants to demonstrate adaptive evolution driven by different pollinators. Our study shows pollinator-driven divergent selection as well as divergent evolution in plant traits. Plants pollinated by bumblebees evolved taller size and more fragrant flowers with increased ultraviolet reflection. Bumblebees preferred bumblebee-pollinated plants over hoverfly-pollinated plants at the end of the experiment, showing that plants had adapted to the bumblebees' preferences. Plants with hoverfly pollination became shorter, had reduced emission of some floral volatiles, but increased fitness through augmented autonomous self-pollination. Our study demonstrates that changes in pollinator communities can have rapid consequences on the evolution of plant traits and mating system. PMID:28291771

Experimental evolution gone wild.

PubMed

Scheinin, M; Riebesell, U; Rynearson, T A; Lohbeck, K T; Collins, S

2015-05-06

Because of their large population sizes and rapid cell division rates, marine microbes have, or can generate, ample variation to fuel evolution over a few weeks or months, and subsequently have the potential to evolve in response to global change. Here we measure evolution in the marine diatom Skeletonema marinoi evolved in a natural plankton community in CO2-enriched mesocosms deployed in situ. Mesocosm enclosures are typically used to study how the species composition and biogeochemistry of marine communities respond to environmental shifts, but have not been used for experimental evolution to date. Using this approach, we detect a large evolutionary response to CO2 enrichment in a focal marine diatom, where population growth rate increased by 1.3-fold in high CO2-evolved lineages. This study opens an exciting new possibility of carrying out in situ evolution experiments to understand how marine microbial communities evolve in response to environmental change.

A new technique for calculations of binary stellar evolution, with application to magnetic braking

NASA Technical Reports Server (NTRS)

Rappaport, S.; Joss, P. C.; Verbunt, F.

1983-01-01

The development of appropriate computer programs has made it possible to conduct studies of stellar evolution which are more detailed and accurate than the investigations previously feasible. However, the use of such programs can also entail some serious drawbacks which are related to the time and expense required for the work. One approach for overcoming these drawbacks involves the employment of simplified stellar evolution codes which incorporate the essential physics of the problem of interest without attempting either great generality or maximal accuracy. Rappaport et al. (1982) have developed a simplified code to study the evolution of close binary stellar systems composed of a collapsed object and a low-mass secondary. The present investigation is concerned with a more general, but still simplified, technique for calculating the evolution of close binary systems with collapsed binaries and mass-losing secondaries.

Cancer in Light of Experimental Evolution

PubMed Central

Sprouffske, Kathleen; Merlo, Lauren M.F.; Gerrish, Philip J.; Maley, Carlo C.; Sniegowski, Paul D.

2012-01-01

Cancer initiation, progression, and the emergence of therapeutic resistance are evolutionary phenomena of clonal somatic cell populations. Studies in microbial experimental evolution and the theoretical work inspired by such studies are yielding deep insights into the evolutionary dynamics of clonal populations, yet there has been little explicit consideration of the relevance of this rapidly growing field to cancer biology. Here, we examine how the understanding of mutation, selection, and spatial structure in clonal populations that is emerging from experimental evolution may be applicable to cancer. Along the way, we discuss some significant ways in which cancer differs from the model systems used in experimental evolution. Despite these differences, we argue that enhanced prediction and control of cancer may be possible using ideas developed in the context of experimental evolution, and we point out some prospects for future research at the interface between these traditionally separate areas. PMID:22975007

Teaching of evolution in public schools: A cross-cultural examination

NASA Astrophysics Data System (ADS)

Stewart, Joshua M.

The current study sought to examine how the cultural settings of Colorado, United States, and Baden-Wurttemberg, Germany, influenced perspectives, understandings, and acceptance of college students who want to become teachers (i.e., prospective teachers) in regard to the theory of evolution, creationism, and intelligent design with both quantitative and qualitative components. The quantitative sample for the study consisted of 221 German prospective teachers from Baden-Wurttemberg and 231 United States prospective teachers from Colorado. The quantitative component consisted of a 42-item survey with both Likert and true/false items to examine how (1) country of origin, (2) religious participation, and (3) educational background influence students' views and understandings of the theory of evolution and alternative conceptions. Additionally, in a Likert 6-item motivated reasoning task (a theoretical construct), prospective teachers were asked to read and critique arguments supporting and opposing the theory of evolution; differences in how students critiqued arguments were hypothesized to demonstrate biases. For a separate sample from the same locations (8 German and 11 United States students), a qualitative component examined prospective teachers' positions on teaching the theory of evolution in public schools. Prospective teachers were asked to provide support for their position, anticipate opposing arguments, and implications that both positions would have for students. Lastly, prospective teachers were also asked to explain and define the theory of evolution. The current study aided in examining how teachers' perspectives, understandings, and acceptance impacted what was taught in the science classroom. The researcher found that country of origin, religious behavior, and educational background predicted prospective teachers' responses to numerous criterion variables used in the current study. Further, qualitative results expressed major differences between prospective teachers' views regarding the inclusion of evolution or alternative conceptions in public schools, between Colorado and Baden-Wurttemberg. As a potential indicator, findings from the current study may be useful in understanding potential differences between these two countries, in regard to perceptions of the theory of evolution and alternative conceptions. Further, findings from the current study might also inform how these topics might be covered in educational settings with a lowered risk of conflict.

Frameworks of reference: How (some) college students think about biological evolution

NASA Astrophysics Data System (ADS)

Filisky, Michael

1999-12-01

Evolution, a key concept for understanding all of biology, is often misunderstood by students from elementary school to graduate school. In order to teach evolution effectively, as well as to teach the biological concepts necessary for understanding evolution, teachers need to understand the initial ideas that students bring with them to the learning experience. Research has shown that many students are likely to hold alternative conceptions that may block their ability to learn evolution. The goal of this study is to contribute to the effectiveness of teaching evolution at the high school and college levels both by investigating concepts that students bring with them to their first college study of evolution, and by examining the conceptual frameworks that support these students as they construct new understanding. This study was executed in two stages. An initial survey of evolutionary understanding was administered to 203 undergraduate students in two courses at two universities in the area of Boston, MA. The surveys elicited short, written responses to five real and fictitious scenarios about biological inheritance and evolutionary change. Responses were coded into categories of concepts. The data were analyzed for patterns of understanding. Students exhibiting concepts from each of the major categories were randomly selected to participate in the subsequent interview stage of the study. Interviews with six of the students were conducted based on an interview guide employing scenarios similar to those from the survey. Analyses of the interview transcripts included the construction of detailed concept maps for each response followed by narratives of each interviewee's conceptual frameworks. The results of both stages of the study revealed a range of alternative conceptions about evolution, including scientifically acceptable Darwinian ideas and other ideas---including Lamarckian inheritance of acquired characteristics---are not accepted by modern science. The interviews revealed a range of reasoning styles and frameworks that explained how students could find these ideas plausible. The study concludes with recommendations for further research on the understanding of evolutionary topics; for adaptations of the research methods; and for teaching strategies to address the findings.

Characterization of Inclusions in Evolution of Sodium Sulfate Using Terahertz Time-domain Spectroscopy.

PubMed

Bao, Rima; Wu, Zhikui; Li, Hao; Wang, Fang; Miao, Xinyang; Feng, Chengjing

2017-01-01

The study of fluid inclusion is one of the important means to understanding the evolution of mineral crystals, and can therefore provide original information of mineral evolution. In the process of evolution, outside factors such as temperature and pressure, directly affect the number and size of inclusions, and thus are related to the properties of crystals. In this paper, terahertz time-domain spectroscopy (THz-TDS) was used to detect sodium sulfate crystals with different growth temperatures, and absorption coefficient spectra of the samples were obtained. It is suggested that the evolution of sodium sulfate could be divided into two stages, and 80°C was the turning point. X-ray diffraction (XRD) and polarizing microscopy were used to support this conclusion. The research showed that THz-TDS could characterize the evolution of mineral crystals, and it had a unique advantage in terms of crystal evolution.

Convergent and divergent evolution in carnivorous pitcher plant traps.

PubMed

Thorogood, Chris J; Bauer, Ulrike; Hiscock, Simon J

2018-02-01

Contents Summary 1035 I. Introduction 1035 II. Evolution of the pitcher 1036 III. Convergent evolution 1036 IV. Divergent evolution 1038 V. Adaptive radiation and speciation 1040 VI. Conclusions and perspectives 1040 Acknowledgements 1040 References 1040 SUMMARY: The pitcher trap is a striking example of convergent evolution across unrelated carnivorous plant lineages. Convergent traits that have evolved across pitcher plant lineages are essential for trap function, suggesting that key selective pressures are in action. Recent studies have also revealed patterns of divergent evolution in functional pitcher morphology within genera. Adaptations to differences in local prey assemblages may drive such divergence and, ultimately, speciation. Here, we review recent research on convergent and divergent evolution in pitcher plant traps, with a focus on the genus Nepenthes, which we propose as a new model for research into adaptive radiation and speciation. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Genomic investigations of evolutionary dynamics and epistasis in microbial evolution experiments.

PubMed

Jerison, Elizabeth R; Desai, Michael M

2015-12-01

Microbial evolution experiments enable us to watch adaptation in real time, and to quantify the repeatability and predictability of evolution by comparing identical replicate populations. Further, we can resurrect ancestral types to examine changes over evolutionary time. Until recently, experimental evolution has been limited to measuring phenotypic changes, or to tracking a few genetic markers over time. However, recent advances in sequencing technology now make it possible to extensively sequence clones or whole-population samples from microbial evolution experiments. Here, we review recent work exploiting these techniques to understand the genomic basis of evolutionary change in experimental systems. We first focus on studies that analyze the dynamics of genome evolution in microbial systems. We then survey work that uses observations of sequence evolution to infer aspects of the underlying fitness landscape, concentrating on the epistatic interactions between mutations and the constraints these interactions impose on adaptation. Copyright © 2015 Elsevier Ltd. All rights reserved.

Genome-Wide Identification of Regulatory Sequences Undergoing Accelerated Evolution in the Human Genome

PubMed Central

Dong, Xinran; Wang, Xiao; Zhang, Feng; Tian, Weidong

2016-01-01

Accelerated evolution of regulatory sequence can alter the expression pattern of target genes, and cause phenotypic changes. In this study, we used DNase I hypersensitive sites (DHSs) to annotate putative regulatory sequences in the human genome, and conducted a genome-wide analysis of the effects of accelerated evolution on regulatory sequences. Working under the assumption that local ancient repeat elements of DHSs are under neutral evolution, we discovered that ∼0.44% of DHSs are under accelerated evolution (ace-DHSs). We found that ace-DHSs tend to be more active than background DHSs, and are strongly associated with epigenetic marks of active transcription. The target genes of ace-DHSs are significantly enriched in neuron-related functions, and their expression levels are positively selected in the human brain. Thus, these lines of evidences strongly suggest that accelerated evolution on regulatory sequences plays important role in the evolution of human-specific phenotypes. PMID:27401230

Biology Professors' and Teachers' Positions Regarding Biological Evolution and Evolution Education in a Middle Eastern Society

ERIC Educational Resources Information Center

BouJaoude, Saouma; Asghar, Anila; Wiles, Jason R.; Jaber, Lama; Sarieddine, Diana; Alters, Brian

2011-01-01

This study investigated three questions: (1) What are Lebanese secondary school (Grade 9-12) biology teachers' and university biology professors' positions regarding biological evolution?, (2) How do participants' religious affiliations relate to their positions about evolutionary science?, and (3) What are participants' positions regarding…

Academic Preparation in Biology and Advocacy for Teaching Evolution: Biology versus Non-Biology Teachers

ERIC Educational Resources Information Center

Nehm, Ross H.; Kim, Sun Young; Sheppard, Keith

2009-01-01

Despite considerable focus on evolution knowledge-belief relationships, little research has targeted populations with strong content backgrounds, such as undergraduate degrees in biology. This study (1) measured precertified biology and non-biology teachers' (n = 167) knowledge of evolution and the nature of science; (2) quantified teacher…

Enhancing Student Explanations of Evolution: Comparing Elaborating and Competing Theory Prompts

ERIC Educational Resources Information Center

Donnelly, Dermot F.; Namdar, Bahadir; Vitale, Jonathan M.; Lai, Kevin; Linn, Marcia C.

2016-01-01

In this study, we explore how two different prompt types within an online computer-based inquiry learning environment enhance 392 7th grade students' explanations of evolution with three teachers. In the "elaborating" prompt condition, students are prompted to write explanations that support the accepted theory of evolution. In the…

Pragmatics and the aims of language evolution.

PubMed

Scott-Phillips, Thomas C

2017-02-01

Pragmatics has historically played a relatively peripheral role in language evolution research. This is a profound mistake. Here I describe how a pragmatic perspective can inform language evolution in the most fundamental way: by making clear what the natural objects of study are, and hence what the aims of the field should be.

Lie symmetries for systems of evolution equations

NASA Astrophysics Data System (ADS)

Paliathanasis, Andronikos; Tsamparlis, Michael

2018-01-01

The Lie symmetries for a class of systems of evolution equations are studied. The evolution equations are defined in a bimetric space with two Riemannian metrics corresponding to the space of the independent and dependent variables of the differential equations. The exact relation of the Lie symmetries with the collineations of the bimetric space is determined.

Evolution in Health and Disease: The Role of Evolutionary Biology in the Medical Curriculum

ERIC Educational Resources Information Center

Downie, J. R.

2004-01-01

Recent work has emphasised the relevance of evolutionary processes to medical thinking and practice. However, medical curricular revisions, in reducing basic science content, have often excluded evolution. This study establishes the extent of inclusion of evolution in UK medical courses, reports on the level of medical student rejection of…

Presenting Global Warming and Evolution as Public Health Issues to Encourage Acceptance of Scientific Evidence

ERIC Educational Resources Information Center

Stover, Shawn K.; McArthur, Laurence B.; Mabry, Michelle L.

2013-01-01

Although evidence supporting anthropogenic global warming and evolution by natural selection is considerable, the public does not embrace these concepts. The current study explores the hypothesis that individuals will become more receptive to scientific viewpoints if evidence for evolution and implications of global warming are presented as issues…

Factors Influencing Junior High School Teachers' Computer-Based Instructional Practices Regarding Their Instructional Evolution Stages

ERIC Educational Resources Information Center

Hsu, Ying-Shao; Wu, Hsin-Kai; Hwang, Fu-Kwun

2007-01-01

Sandholtz, Ringstaff, & Dwyer (1996) list five stages in the "evolution" of a teacher's capacity for computer-based instruction--entry, adoption, adaptation, appropriation and invention--which hereafter will be called the teacher's computer-based instructional evolution. In this study of approximately six hundred junior high school…

The Nature of Evolution

ERIC Educational Resources Information Center

Alles, David L.

2005-01-01

The nature of evolution, the historical change in the universe, and the change that is caused by the workings of the dynamic processes at the smallest and largest scales are studied. It is viewed that the cumulative change in the historical systems is caused by evolution, which is a type of causal relationship and evolutionary processes could be…

Generation of Werner states and preservation of entanglement in a noisy environment [rapid communication

NASA Astrophysics Data System (ADS)

Jakóbczyk, Lech; Jamróz, Anna

2005-12-01

We study the influence of noisy environment on the evolution of two-atomic system in the presence of collective damping. Generation of Werner states as asymptotic stationary states of evolution is described. We also show that for some initial states the amount of entanglement is preserved during the evolution.

Dynamic Creative Interaction Networks and Team Creativity Evolution: A Longitudinal Study

ERIC Educational Resources Information Center

Jiang, Hui; Zhang, Qing-Pu; Zhou, Yang

2018-01-01

To assess the dynamical effects of creative interaction networks on team creativity evolution, this paper elaborates a theoretical framework that links the key elements of creative interaction networks, including node, edge and network structure, to creativity in teams. The process of team creativity evolution is divided into four phases,…

Monogamy, strongly bonded groups, and the evolution of human social structure.

PubMed

Chapais, Bernard

2013-01-01

Human social evolution has most often been treated in a piecemeal fashion, with studies focusing on the evolution of specific components of human society such as pair-bonding, cooperative hunting, male provisioning, grandmothering, cooperative breeding, food sharing, male competition, male violence, sexual coercion, territoriality, and between-group conflicts. Evolutionary models about any one of those components are usually concerned with two categories of questions, one relating to the origins of the component and the other to its impact on the evolution of human cognition and social life. Remarkably few studies have been concerned with the evolution of the entity that integrates all components, the human social system itself. That social system has as its core feature human social structure, which I define here as the common denominator of all human societies in terms of group composition, mating system, residence patterns, and kinship structures. The paucity of information on the evolution of human social structure poses substantial problems because that information is useful, if not essential, to assess both the origins and impact of any particular aspect of human society. Copyright © 2013 Wiley Periodicals, Inc.

Historical and contingent factors affect re-evolution of a complex feature lost during mass extinction in communities of digital organisms.

PubMed

Yedid, G; Ofria, C A; Lenski, R E

2008-09-01

Re-evolution of complex biological features following the extinction of taxa bearing them remains one of evolution's most interesting phenomena, but is not amenable to study in fossil taxa. We used communities of digital organisms (computer programs that self-replicate, mutate and evolve), subjected to periods of low resource availability, to study the evolution, loss and re-evolution of a complex computational trait, the function EQU (bit-wise logical equals). We focused our analysis on cases where the pre-extinction EQU clade had surviving descendents at the end of the extinction episode. To see if these clades retained the capacity to re-evolve EQU, we seeded one set of multiple subreplicate 'replay' populations using the most abundant survivor of the pre-extinction EQU clade, and another set with the actual end-extinction ancestor of the organism in which EQU re-evolved following the extinction episode. Our results demonstrate that stochastic, historical, genomic and ecological factors can lead to constraints on further adaptation, and facilitate or hinder re-evolution of a complex feature.

Evolution and development in cave animals: from fish to crustaceans.

PubMed

Protas, Meredith; Jeffery, William R

2012-01-01

Cave animals are excellent models to study the general principles of evolution as well as the mechanisms of adaptation to a novel environment: the perpetual darkness of caves. In this article, two of the major model systems used to study the evolution and development (evo-devo) of cave animals are described: the teleost fish Astyanax mexicanus and the isopod crustacean Asellus aquaticus. The ways in which these animals match the major attributes expected of an evo-devo cave animal model system are described. For both species, we enumerate the regressive and constructive troglomorphic traits that have evolved during their adaptation to cave life, the developmental and genetic basis of these traits, the possible evolutionary forces responsible for them, and potential new areas in which these model systems could be used for further exploration of the evolution of cave animals. Furthermore, we compare the two model cave animals to investigate the mechanisms of troglomorphic evolution. Finally, we propose a few other cave animal systems that would be suitable for development as additional models to obtain a more comprehensive understanding of the developmental and genetic mechanisms involved in troglomorphic evolution.

Experimental evolution in biofilm populations

PubMed Central

Steenackers, Hans P.; Parijs, Ilse; Foster, Kevin R.; Vanderleyden, Jozef

2016-01-01

Biofilms are a major form of microbial life in which cells form dense surface associated communities that can persist for many generations. The long-life of biofilm communities means that they can be strongly shaped by evolutionary processes. Here, we review the experimental study of evolution in biofilm communities. We first provide an overview of the different experimental models used to study biofilm evolution and their associated advantages and disadvantages. We then illustrate the vast amount of diversification observed during biofilm evolution, and we discuss (i) potential ecological and evolutionary processes behind the observed diversification, (ii) recent insights into the genetics of adaptive diversification, (iii) the striking degree of parallelism between evolution experiments and real-life biofilms and (iv) potential consequences of diversification. In the second part, we discuss the insights provided by evolution experiments in how biofilm growth and structure can promote cooperative phenotypes. Overall, our analysis points to an important role of biofilm diversification and cooperation in bacterial survival and productivity. Deeper understanding of both processes is of key importance to design improved antimicrobial strategies and diagnostic techniques. PMID:26895713

Anthropogenic fire drives the evolution of seed traits

PubMed Central

Gómez-González, Susana; Torres-Díaz, Cristian; Bustos-Schindler, Carlos; Gianoli, Ernesto

2011-01-01

Fire is a major disturbance affecting ecosystems worldwide. Phylogenetic studies have shown that the evolution of seed persistence (fire resistance) is associated with fire frequency or severity. However, the existence of specific seed traits resulting from natural selection mediated by fire remains a key question in plant evolution. We evaluated the role of fire in the evolution of seed traits from a microevolutionary perspective, using as a study system a native forb from the Chilean matorral, where fire is a novel, anthropogenic disturbance. We show that anthropogenic fires are shaping the evolution of seed traits such as pubescence and shape. Among-population variation in seed pubescence, shape, and pericarp thickness was strongly associated with fire frequency, and within a population, fire selected those plants with more pubescent seeds, thicker pericarps, and less rounded seeds. Seed pubescence and shape were shown to be heritable traits. Our findings provide insights into the understanding of the evolution of seed traits in fire-prone environments and demonstrate that human-made fires can be driving evolutionary changes in plant species from ecosystems where fires do not occur naturally. PMID:22065739

Experimental evolution in biofilm populations.

PubMed

Steenackers, Hans P; Parijs, Ilse; Dubey, Akanksha; Foster, Kevin R; Vanderleyden, Jozef

2016-05-01

Biofilms are a major form of microbial life in which cells form dense surface associated communities that can persist for many generations. The long-life of biofilm communities means that they can be strongly shaped by evolutionary processes. Here, we review the experimental study of evolution in biofilm communities. We first provide an overview of the different experimental models used to study biofilm evolution and their associated advantages and disadvantages. We then illustrate the vast amount of diversification observed during biofilm evolution, and we discuss (i) potential ecological and evolutionary processes behind the observed diversification, (ii) recent insights into the genetics of adaptive diversification, (iii) the striking degree of parallelism between evolution experiments and real-life biofilms and (iv) potential consequences of diversification. In the second part, we discuss the insights provided by evolution experiments in how biofilm growth and structure can promote cooperative phenotypes. Overall, our analysis points to an important role of biofilm diversification and cooperation in bacterial survival and productivity. Deeper understanding of both processes is of key importance to design improved antimicrobial strategies and diagnostic techniques. © FEMS 2016.

Anthropogenic fire drives the evolution of seed traits.

PubMed

Gómez-González, Susana; Torres-Díaz, Cristian; Bustos-Schindler, Carlos; Gianoli, Ernesto

2011-11-15

Fire is a major disturbance affecting ecosystems worldwide. Phylogenetic studies have shown that the evolution of seed persistence (fire resistance) is associated with fire frequency or severity. However, the existence of specific seed traits resulting from natural selection mediated by fire remains a key question in plant evolution. We evaluated the role of fire in the evolution of seed traits from a microevolutionary perspective, using as a study system a native forb from the Chilean matorral, where fire is a novel, anthropogenic disturbance. We show that anthropogenic fires are shaping the evolution of seed traits such as pubescence and shape. Among-population variation in seed pubescence, shape, and pericarp thickness was strongly associated with fire frequency, and within a population, fire selected those plants with more pubescent seeds, thicker pericarps, and less rounded seeds. Seed pubescence and shape were shown to be heritable traits. Our findings provide insights into the understanding of the evolution of seed traits in fire-prone environments and demonstrate that human-made fires can be driving evolutionary changes in plant species from ecosystems where fires do not occur naturally.

Gain in Student Understanding of the Role of Random Variation in Evolution Following Teaching Intervention Based on Luria-Delbruck Experiment†

PubMed Central

Robson, Rachel L.; Burns, Susan

2011-01-01

Undergraduate students in introductory biology classes are typically saddled with pre-existing popular beliefs that impede their ability to learn about biological evolution. One of the most common misconceptions about evolution is that the environment causes advantageous mutations, rather than the correct view that mutations occur randomly and the environment only selects for mutants with advantageous traits. In this study, a significant gain in student understanding of the role of randomness in evolution was observed after students participated in an inquiry-based pedagogical intervention based on the Luria-Delbruck experiment. Questionnaires with isomorphic questions regarding environmental selection among random mutants were administered to study participants (N = 82) in five separate sections of a sophomore-level microbiology class before and after the teaching intervention. Demographic data on each participant was also collected, in a way that preserved anonymity. Repeated measures analysis showed that post-test scores were significantly higher than pre-test scores with regard to the questions about evolution (F(1, 77) = 25.913, p < 0.001). Participants’ pre-existing beliefs about evolution had no significant effect on gain in understanding of this concept. This study indicates that conducting and discussing an experiment about phage resistance in E. coli may improve student understanding of the role of stochastic events in evolution more broadly, as post-test answers showed that students were able to apply the lesson of the Luria-Delbruck experiment to other organisms subjected to other kinds of selection. PMID:23653732

Loess deposits since early Pleistocene in northeast China and implications for desert evolution in east China

NASA Astrophysics Data System (ADS)

Sun, Miao; Zhang, Xujiao; Tian, Mingzhong; Liu, Ru; He, Zexin; Qi, Lin; Qiao, Yansong

2018-04-01

Loess deposits and deserts are regarded as coupled geological systems and loess deposits on the periphery of deserts can often be used to reconstruct desert evolution. Previous studies of desert evolution in Asia are mainly concentrated in northwest China and the China Loess Plateau, and little is known about long-term desert evolution in east China. In this study, we selected the Sishijiazi loess section in the Chifeng area in northeast China to study the long-term evolution of the desert in east China. A high-resolution magnetostratigraphy combined with optically stimulated luminescence dating indicated that the age of the section base is approximately 1.02 Ma. The Brunhes-Matuyama boundary is at the depth of 39.8 m in loess unit L8, and the upper boundary of the Jaramillo Subchron is at the depth of 60.8 m in paleosol S10. The results of grain-size analysis indicate a coarsening grain-size trend in the past 1.0 Ma. In addition, based on grain-size variations, the desert evolution in east China since ∼1.0 Ma can be divided into three stages: stability from 1.0 to 0.8 Ma, desert recession from 0.8 to 0.5 Ma, and gradual expansion since 0.5 Ma. Our results further indicate that the evolution of desert in east China was mainly controlled by changes in global ice volume, and that the uplift of the Tibetan Plateau may have had an additional effect.

Convergent and correlated evolution of major life-history traits in the angiosperm genus Leucadendron (Proteaceae).

PubMed

Tonnabel, Jeanne; Mignot, Agnès; Douzery, Emmanuel J P; Rebelo, Anthony G; Schurr, Frank M; Midgley, Jeremy; Illing, Nicola; Justy, Fabienne; Orcel, Denis; Olivieri, Isabelle

2014-10-01

Natural selection is expected to cause convergence of life histories among taxa as well as correlated evolution of different life-history traits. Here, we quantify the extent of convergence of five key life-history traits (adult fire survival, seed storage, degree of sexual dimorphism, pollination mode, and seed-dispersal mode) and test hypotheses about their correlated evolution in the genus Leucadendron (Proteaceae) from the fire-prone South African fynbos. We reconstructed a new molecular phylogeny of this highly diverse genus that involves more taxa and molecular markers than previously. This reconstruction identifies new clades that were not detected by previous molecular study and morphological classifications. Using this new phylogeny and robust methods that account for phylogenetic uncertainty, we show that the five life-history traits studied were labile during the evolutionary history of the genus. This diversity allowed us to tackle major questions about the correlated evolution of life-history strategies. We found that species with longer seed-dispersal distances tended to evolve lower pollen-dispersal distance, that insect-pollinated species evolved decreased sexual dimorphism, and that species with a persistent soil seed-bank evolved toward reduced fire-survival ability of adults. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

Genome structure drives patterns of gene family evolution in ciliates, a case study using Chilodonella uncinata (Protista, Ciliophora, Phyllopharyngea).

PubMed

Gao, Feng; Song, Weibo; Katz, Laura A

2014-08-01

In most lineages, diversity among gene family members results from gene duplication followed by sequence divergence. Because of the genome rearrangements during the development of somatic nuclei, gene family evolution in ciliates involves more complex processes. Previous work on the ciliate Chilodonella uncinata revealed that macronuclear β-tubulin gene family members are generated by alternative processing, in which germline regions are alternatively used in multiple macronuclear chromosomes. To further study genome evolution in this ciliate, we analyzed its transcriptome and found that (1) alternative processing is extensive among gene families; and (2) such gene families are likely to be C. uncinata specific. We characterized additional macronuclear and micronuclear copies of one candidate alternatively processed gene family-a protein kinase domain containing protein (PKc)-from two C. uncinata strains. Analysis of the PKc sequences reveals that (1) multiple PKc gene family members in the macronucleus share some identical regions flanked by divergent regions; and (2) the shared identical regions are processed from a single micronuclear chromosome. We discuss analogous processes in lineages across the eukaryotic tree of life to provide further insights on the impact of genome structure on gene family evolution in eukaryotes. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

Effects of conformism on the cultural evolution of social behaviour.

PubMed

Molleman, Lucas; Pen, Ido; Weissing, Franz J

2013-01-01

Models of cultural evolution study how the distribution of cultural traits changes over time. The dynamics of cultural evolution strongly depends on the way these traits are transmitted between individuals by social learning. Two prominent forms of social learning are payoff-based learning (imitating others that have higher payoffs) and conformist learning (imitating locally common behaviours). How payoff-based and conformist learning affect the cultural evolution of cooperation is currently a matter of lively debate, but few studies systematically analyse the interplay of these forms of social learning. Here we perform such a study by investigating how the interaction of payoff-based and conformist learning affects the outcome of cultural evolution in three social contexts. First, we develop a simple argument that provides insights into how the outcome of cultural evolution will change when more and more conformist learning is added to payoff-based learning. In a social dilemma (e.g. a Prisoner's Dilemma), conformism can turn cooperation into a stable equilibrium; in an evasion game (e.g. a Hawk-Dove game or a Snowdrift game) conformism tends to destabilize the polymorphic equilibrium; and in a coordination game (e.g. a Stag Hunt game), conformism changes the basin of attraction of the two equilibria. Second, we analyse a stochastic event-based model, revealing that conformism increases the speed of cultural evolution towards pure equilibria. Individual-based simulations as well as the analysis of the diffusion approximation of the stochastic model by and large confirm our findings. Third, we investigate the effect of an increasing degree of conformism on cultural group selection in a group-structured population. We conclude that, in contrast to statements in the literature, conformism hinders rather than promotes the evolution of cooperation.

Stochasticity versus determinism: consequences for realistic gene regulatory network modelling and evolution.

PubMed

Jenkins, Dafyd J; Stekel, Dov J

2010-02-01

Gene regulation is one important mechanism in producing observed phenotypes and heterogeneity. Consequently, the study of gene regulatory network (GRN) architecture, function and evolution now forms a major part of modern biology. However, it is impossible to experimentally observe the evolution of GRNs on the timescales on which living species evolve. In silico evolution provides an approach to studying the long-term evolution of GRNs, but many models have either considered network architecture from non-adaptive evolution, or evolution to non-biological objectives. Here, we address a number of important modelling and biological questions about the evolution of GRNs to the realistic goal of biomass production. Can different commonly used simulation paradigms, in particular deterministic and stochastic Boolean networks, with and without basal gene expression, be used to compare adaptive with non-adaptive evolution of GRNs? Are these paradigms together with this goal sufficient to generate a range of solutions? Will the interaction between a biological goal and evolutionary dynamics produce trade-offs between growth and mutational robustness? We show that stochastic basal gene expression forces shrinkage of genomes due to energetic constraints and is a prerequisite for some solutions. In systems that are able to evolve rates of basal expression, two optima, one with and one without basal expression, are observed. Simulation paradigms without basal expression generate bloated networks with non-functional elements. Further, a range of functional solutions was observed under identical conditions only in stochastic networks. Moreover, there are trade-offs between efficiency and yield, indicating an inherent intertwining of fitness and evolutionary dynamics.

Dynamic evolution characteristics of a fractional order hydropower station system

NASA Astrophysics Data System (ADS)

Gao, Xiang; Chen, Diyi; Yan, Donglin; Xu, Beibei; Wang, Xiangyu

2018-01-01

This paper investigates the dynamic evolution characteristics of the hydropower station by introducing the fractional order damping forces. A careful analysis of the dynamic characteristics of the generator shaft system is carried out under different values of fractional order. It turns out the vibration state of the axis coordinates has a certain evolution law with the increase of the fractional order. Significantly, the obtained law exists in the horizontal evolution and vertical evolution of the dynamical behaviors. Meanwhile, some interesting dynamical phenomena were found in this process. The outcomes of this study enrich the nonlinear dynamic theory from the engineering practice of hydropower stations.

The evolution of cell types in animals: emerging principles from molecular studies.

PubMed

Arendt, Detlev

2008-11-01

Cell types are fundamental units of multicellular life but their evolution is obscure. How did the first cell types emerge and become distinct in animal evolution? What were the sets of cell types that existed at important evolutionary nodes that represent eumetazoan or bilaterian ancestors? How did these ancient cell types diversify further during the evolution of organ systems in the descending evolutionary lines? The recent advent of cell type molecular fingerprinting has yielded initial insights into the evolutionary interrelationships of cell types between remote animal phyla and has allowed us to define some first principles of cell type diversification in animal evolution.

Transverse momentum dependent parton distributions at small- x

DOE PAGES

Xiao, Bo-Wen; Yuan, Feng; Zhou, Jian

2017-05-23

We study the transverse momentum dependent (TMD) parton distributions at small-x in a consistent framework that takes into account the TMD evolution and small-x evolution simultaneously. The small-x evolution effects are included by computing the TMDs at appropriate scales in terms of the dipole scattering amplitudes, which obey the relevant Balitsky–Kovchegov equation. Meanwhile, the TMD evolution is obtained by resumming the Collins–Soper type large logarithms emerged from the calculations in small-x formalism into Sudakov factors.

The resolved history of galaxy evolution.

PubMed

Brinchmann, Jarle

2002-12-15

We briefly review the study of the evolution of galaxies from an observational point of view, with particular emphasis on the role of the Hubble Space Telescope in probing the evolution of the different morphological types of galaxy. We show how using the stellar mass of galaxies as a tracer of evolution can improve our understanding of the physical process taking place before turning our eyes towards the future and giving an overview of what we can expect from future advances in technology.

Transverse momentum dependent parton distributions at small-x

NASA Astrophysics Data System (ADS)

Xiao, Bo-Wen; Yuan, Feng; Zhou, Jian

2017-08-01

We study the transverse momentum dependent (TMD) parton distributions at small-x in a consistent framework that takes into account the TMD evolution and small-x evolution simultaneously. The small-x evolution effects are included by computing the TMDs at appropriate scales in terms of the dipole scattering amplitudes, which obey the relevant Balitsky-Kovchegov equation. Meanwhile, the TMD evolution is obtained by resumming the Collins-Soper type large logarithms emerged from the calculations in small-x formalism into Sudakov factors.

Transverse momentum dependent parton distributions at small- x

DOE Office of Scientific and Technical Information (OSTI.GOV)

Xiao, Bo-Wen; Yuan, Feng; Zhou, Jian

We study the transverse momentum dependent (TMD) parton distributions at small-x in a consistent framework that takes into account the TMD evolution and small-x evolution simultaneously. The small-x evolution effects are included by computing the TMDs at appropriate scales in terms of the dipole scattering amplitudes, which obey the relevant Balitsky–Kovchegov equation. Meanwhile, the TMD evolution is obtained by resumming the Collins–Soper type large logarithms emerged from the calculations in small-x formalism into Sudakov factors.

In situ/Operando studies of electrocatalysts using hard X-ray spectroscopy

DOE PAGES

Lassalle-Kaiser, Benedikt; Gul, Sheraz; Kern, Jan; ...

2017-05-02

This review focuses on the use of X-ray absorption and emission spectroscopy techniques using hard X-rays to study electrocatalysts under in situ/operando conditions. The importance and the versatility of methods in the study of electrodes in contact with the electrolytes are described, when they are being cycled through the catalytic potentials during the progress of the oxygen-evolution, oxygen reduction and hydrogen evolution reactions. The catalytic oxygen evolution reaction is illustrated with examples using three oxides, Co, Ni and Mn, and two sulfides, Mo and Co. These are used as examples for the hydrogen evolution reaction. A bimetallic, bifunctional oxygen evolvingmore » and oxygen reducing Ni/Mn oxide is also presented. The various advantages and constraints in the use of these techniques and the future outlook are discussed.« less

Gene networks and the evolution of plant morphology.

PubMed

Das Gupta, Mainak; Tsiantis, Miltos

2018-06-06

Elaboration of morphology depends on the precise orchestration of gene expression by key regulatory genes. The hierarchy and relationship among the participating genes is commonly known as gene regulatory network (GRN). Therefore, the evolution of morphology ultimately occurs by the rewiring of gene network structures or by the co-option of gene networks to novel domains. The availability of high-resolution expression data combined with powerful statistical tools have opened up new avenues to formulate and test hypotheses on how diverse gene networks influence trait development and diversity. Here we summarize recent studies based on both big-data and genetics approaches to understand the evolution of plant form and physiology. We also discuss recent genome-wide investigations on how studying open-chromatin regions may help study the evolution of gene expression patterns. Copyright © 2018. Published by Elsevier Ltd.

Pigmentation in Xiphophorus: an emerging system in ecological and evolutionary genetics.

PubMed

Culumber, Zachary W

2014-02-01

The genus Xiphophorus has great potential to contribute to the study of vertebrate pigmentation and elucidating the relative influence of ecology, physiology, and behavior on evolution at the molecular level. More importantly, the association between pigmentation and a functional oncogene offers the potential to understand the evolution and maintenance of cancer-causing genetic elements. Using criteria laid out recently in the literature, I demonstrate the power of the Xiphophorus system for studying pigment evolution through integrative organismal biology. Using the most recent phylogeny, the phylogenetic distribution of several important pigmentation loci are reevaluated. I then review support for existing hypotheses of the functional importance of pigmentation. Finally, new observations and hypotheses regarding some of the characteristics of pigment patterns in natural populations and open questions and future directions in the study of the evolution of these traits are discussed.

Sex-biased dispersal, kin selection and the evolution of sexual conflict.

PubMed

Faria, Gonçalo S; Varela, Susana A M; Gardner, Andy

2015-10-01

There is growing interest in resolving the curious disconnect between the fields of kin selection and sexual selection. Rankin's (2011, J. Evol. Biol. 24, 71-81) theoretical study of the impact of kin selection on the evolution of sexual conflict in viscous populations has been particularly valuable in stimulating empirical research in this area. An important goal of that study was to understand the impact of sex-specific rates of dispersal upon the coevolution of male-harm and female-resistance behaviours. But the fitness functions derived in Rankin's study do not flow from his model's assumptions and, in particular, are not consistent with sex-biased dispersal. Here, we develop new fitness functions that do logically flow from the model's assumptions, to determine the impact of sex-specific patterns of dispersal on the evolution of sexual conflict. Although Rankin's study suggested that increasing male dispersal always promotes the evolution of male harm and that increasing female dispersal always inhibits the evolution of male harm, we find that the opposite can also be true, depending upon parameter values. © 2015 The Authors. Journal of Evolutionary Biology published by John Wiley & Sons Ltd on behalf of European Society for Evolutionary Biology.

Testing for adaptive evolution of the female reproductive protein ZPC in mammals, birds and fishes reveals problems with the M7-M8 likelihood ratio test.

PubMed

Berlin, Sofia; Smith, Nick G C

2005-11-10

Adaptive evolution appears to be a common feature of reproductive proteins across a very wide range of organisms. A promising way of addressing the evolutionary forces responsible for this general phenomenon is to test for adaptive evolution in the same gene but among groups of species, which differ in their reproductive biology. One can then test evolutionary hypotheses by asking whether the variation in adaptive evolution is consistent with the variation in reproductive biology. We have attempted to apply this approach to the study of a female reproductive protein, zona pellucida C (ZPC), which has been previously shown by the use of likelihood ratio tests (LRTs) to be under positive selection in mammals. We tested for evidence of adaptive evolution of ZPC in 15 mammalian species, in 11 avian species and in six fish species using three different LRTs (M1a-M2a, M7-M8, and M8a-M8). The only significant findings of adaptive evolution came from the M7-M8 test in mammals and fishes. Since LRTs of adaptive evolution may yield false positives in some situations, we examined the properties of the LRTs by several different simulation methods. When we simulated data to test the robustness of the LRTs, we found that the pattern of evolution in ZPC generates an excess of false positives for the M7-M8 LRT but not for the M1a-M2a or M8a-M8 LRTs. This bias is strong enough to have generated the significant M7-M8 results for mammals and fishes. We conclude that there is no strong evidence for adaptive evolution of ZPC in any of the vertebrate groups we studied, and that the M7-M8 LRT can be biased towards false inference of adaptive evolution by certain patterns of non-adaptive evolution.

Preservice teachers: Future first responders in the evolution versus intelligent design battle

NASA Astrophysics Data System (ADS)

Strauss, Jeffrey M.

The American Association for the Advancement of Science (AAAS) states that evolution is the unifying theme from which all biological science is to be organized and it is the basic principle that guides the majority of biology curricula in the American public school systems today. Previous research indicates a widespread lack of acceptance by the American public of the veracity of this theory and even less agreement that it should be taught as the only theory of human origins in the public schools. Many studies have also documented students' difficulties in learning, or accepting, the theory of evolution. From the time of the Scopes trial in the 1920s, to landmark Supreme Court decisions in the seventies and eighties, the manner of how evolution should taught has been an issue of contention. The most recent challenge to evolution's putative privileged place is called the intelligent design movement which seeks recognition as a competing scientific theory in a way that scientific creationism was never able to be recognized. While there has been much research conducted on the issue of student and teacher acceptance of the theory of evolution, until recently there have been few documented studies of the preservice teacher. To help fill this gap a survey based quantitative study of 330 preservice teachers from both a public and private Southern California university credentialing program was conducted. Their positions regarding the teaching of evolution in the public schools as well as their own beliefs about the importance of the issue were assessed. Results revealed that a majority (52%) was against the teaching of the theory of evolution as the only scientific theory of origins and that over 38% believed that intelligent design should be taught as an alternate or competing theory. Factors that identified this latter group were strongly held religious beliefs, a conservative political ideology, a low level of acceptance of the scientific consensus for the validity about the theory of evolution, and a misunderstanding regarding the nature of science (NOS).

Study regarding the density evolution of messages and the characteristic functions associated of a LDPC code

NASA Astrophysics Data System (ADS)

Drăghici, S.; Proştean, O.; Răduca, E.; Haţiegan, C.; Hălălae, I.; Pădureanu, I.; Nedeloni, M.; (Barboni Haţiegan, L.

2017-01-01

In this paper a method with which a set of characteristic functions are associated to a LDPC code is shown and also functions that represent the evolution density of messages that go along the edges of a Tanner graph. Graphic representations of the density evolution are shown respectively the study and simulation of likelihood threshold that render asymptotic boundaries between which there are decodable codes were made using MathCad V14 software.

[Evolution of episiotomy. Following 2 types of care].

PubMed

Martín Jiménez, E; Menesas Escribano, M J; Castejón Martin, D; Gil Martínez, C; Pérez Doblado, P; Rodríguez, B P

2001-11-01

Unified care when treating an episiotomy is essential to avoid complications which develop during puerperium. An analysis was carried out by means of a comparative clinical study of two groups of primiparous women, the evolution of their episiotomy in terms of the application of 0.4% providone-iodine" in eight qualitative variables analyzed independently. Due to its greater influence on the evolution of an episiotomy, this study evaluated in more depth one of these variables which defines its quality: dehiscence.

The Stochastic Evolution of a Protocell: The Gillespie Algorithm in a Dynamically Varying Volume

PubMed Central

Carletti, T.; Filisetti, A.

2012-01-01

We propose an improvement of the Gillespie algorithm allowing us to study the time evolution of an ensemble of chemical reactions occurring in a varying volume, whose growth is directly related to the amount of some specific molecules, belonging to the reactions set. This allows us to study the stochastic evolution of a protocell, whose volume increases because of the production of container molecules. Several protocell models are considered and compared with the deterministic models. PMID:22536297

Evolution of semilocal string networks. II. Velocity estimators

NASA Astrophysics Data System (ADS)

Lopez-Eiguren, A.; Urrestilla, J.; Achúcarro, A.; Avgoustidis, A.; Martins, C. J. A. P.

2017-07-01

We continue a comprehensive numerical study of semilocal string networks and their cosmological evolution. These can be thought of as hybrid networks comprised of (nontopological) string segments, whose core structure is similar to that of Abelian Higgs vortices, and whose ends have long-range interactions and behavior similar to that of global monopoles. Our study provides further evidence of a linear scaling regime, already reported in previous studies, for the typical length scale and velocity of the network. We introduce a new algorithm to identify the position of the segment cores. This allows us to determine the length and velocity of each individual segment and follow their evolution in time. We study the statistical distribution of segment lengths and velocities for radiation- and matter-dominated evolution in the regime where the strings are stable. Our segment detection algorithm gives higher length values than previous studies based on indirect detection methods. The statistical distribution shows no evidence of (anti)correlation between the speed and the length of the segments.

Grid Integration Studies: Advancing Clean Energy Planning and Deployment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Katz, Jessica; Chernyakhovskiy, Ilya

2016-07-01

Integrating significant variable renewable energy (VRE) into the grid requires an evolution in power system planning and operation. To plan for this evolution, power system stakeholders can undertake grid integration studies. This Greening the Grid document reviews grid integration studies, common elements, questions, and guidance for system planners.

Measuring cancer evolution from the genome.

PubMed

Graham, Trevor A; Sottoriva, Andrea

2017-01-01

The temporal dynamics of cancer evolution remain elusive, because it is impractical to longitudinally observe cancers unperturbed by treatment. Consequently, our knowledge of how cancers grow largely derives from inferences made from a single point in time - the endpoint in the cancer's evolution, when it is removed from the body and studied in the laboratory. Fortuitously however, the cancer genome, by virtue of ongoing mutations that uniquely mark clonal lineages within the tumour, provides a rich, yet surreptitious, record of cancer development. In this review, we describe how a cancer's genome can be analysed to reveal the temporal history of mutation and selection, and discuss why both selective and neutral evolution feature prominently in carcinogenesis. We argue that selection in cancer can only be properly studied once we have some understanding of what the absence of selection looks like. We review the data describing punctuated evolution in cancer, and reason that punctuated phenotype evolution is consistent with both gradual and punctuated genome evolution. We conclude that, to map and predict evolutionary trajectories during carcinogenesis, it is critical to better understand the relationship between genotype change and phenotype change. Copyright © 2016 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd. Copyright © 2016 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

Trends in the sand: Directional evolution in the shell shape of recessing scallops (Bivalvia: Pectinidae).

PubMed

Sherratt, Emma; Alejandrino, Alvin; Kraemer, Andrew C; Serb, Jeanne M; Adams, Dean C

2016-09-01

Directional evolution is one of the most compelling evolutionary patterns observed in macroevolution. Yet, despite its importance, detecting such trends in multivariate data remains a challenge. In this study, we evaluate multivariate evolution of shell shape in 93 bivalved scallop species, combining geometric morphometrics and phylogenetic comparative methods. Phylomorphospace visualization described the history of morphological diversification in the group; revealing that taxa with a recessing life habit were the most distinctive in shell shape, and appeared to display a directional trend. To evaluate this hypothesis empirically, we extended existing methods by characterizing the mean directional evolution in phylomorphospace for recessing scallops. We then compared this pattern to what was expected under several alternative evolutionary scenarios using phylogenetic simulations. The observed pattern did not fall within the distribution obtained under multivariate Brownian motion, enabling us to reject this evolutionary scenario. By contrast, the observed pattern was more similar to, and fell within, the distribution obtained from simulations using Brownian motion combined with a directional trend. Thus, the observed data are consistent with a pattern of directional evolution for this lineage of recessing scallops. We discuss this putative directional evolutionary trend in terms of its potential adaptive role in exploiting novel habitats. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

Adaptive evolution in locomotor performance: How selective pressures and functional relationships produce diversity.

PubMed

Scales, Jeffrey A; Butler, Marguerite A

2016-01-01

Despite the complexity of nature, most comparative studies of phenotypic evolution consider selective pressures in isolation. When competing pressures operate on the same system, it is commonly expected that trade-offs will occur that will limit the evolution of phenotypic diversity, however, it is possible that interactions among selective pressures may promote diversity instead. We explored the evolution of locomotor performance in lizards in relation to possible selective pressures using the Ornstein-Uhlenbeck process. Here, we show that a combination of selection based on foraging mode and predator escape is required to explain variation in performance phenotypes. Surprisingly, habitat use contributed little explanatory power. We find that it is possible to evolve very different abilities in performance which were previously thought to be tightly correlated, supporting a growing literature that explores the many-to-one mapping of morphological design. Although we generally find the expected trade-off between maximal exertion and speed, this relationship surprisingly disappears when species experience selection for both performance types. We conclude that functional integration need not limit adaptive potential, and that an integrative approach considering multiple major influences on a phenotype allows a more complete understanding of adaptation and the evolution of diversity. © 2015 The Author(s). Evolution © 2015 The Society for the Study of Evolution.

A Cross-Cultural Comparison of Korean and American Science Teachers' Views of Evolution and the Nature of Science

NASA Astrophysics Data System (ADS)

Kim, Sun Young; Nehm, Ross H.

2011-01-01

Despite a few international comparisons of the evolutionary beliefs of the general public, comparatively less research has focused on science teachers. Cross-cultural studies offer profitable opportunities for exploring the interactions among knowledge and belief variables in regard to evolution in different socio-cultural contexts. We investigated the evolutionary worldviews of pre-service science teachers from Asia (specifically South Korea), a region often excluded from international comparisons. We compared Korean and American science teachers': (1) understandings of evolution and the nature of science, and (2) acceptance of evolution in order to elucidate how knowledge and belief relationships are manifested in different cultural contexts. We found that Korean science teachers exhibited 'moderate' evolutionary acceptance levels comparable to or lower than American science teacher samples. Gender was significantly related to Korean teachers' evolution content knowledge and acceptance of evolution, with female Christian biology teachers displaying the lowest values on all measures. Korean science teachers' understandings of nature of science were significantly related to their acceptance and understanding of evolution; this relationship appears to transcend cultural boundaries. Our new data on Korean teachers, combined with studies from more than 20 other nations, expose the global nature of science teacher ambivalence or antipathy toward evolutionary knowledge.

Investigation of shear damage considering the evolution of anisotropy

NASA Astrophysics Data System (ADS)

Kweon, S.

2013-12-01

The damage that occurs in shear deformations in view of anisotropy evolution is investigated. It is widely believed in the mechanics research community that damage (or porosity) does not evolve (increase) in shear deformations since the hydrostatic stress in shear is zero. This paper proves that the above statement can be false in large deformations of simple shear. The simulation using the proposed anisotropic ductile fracture model (macro-scale) in this study indicates that hydrostatic stress becomes nonzero and (thus) porosity evolves (increases or decreases) in the simple shear deformation of anisotropic (orthotropic) materials. The simple shear simulation using a crystal plasticity based damage model (meso-scale) shows the same physics as manifested in the above macro-scale model that porosity evolves due to the grain-to-grain interaction, i.e., due to the evolution of anisotropy. Through a series of simple shear simulations, this study investigates the effect of the evolution of anisotropy, i.e., the rotation of the orthotropic axes onto the damage (porosity) evolution. The effect of the evolutions of void orientation and void shape onto the damage (porosity) evolution is investigated as well. It is found out that the interaction among porosity, the matrix anisotropy and void orientation/shape plays a crucial role in the ductile damage of porous materials.

Gene duplication and the evolution of phenotypic diversity in insect societies.

PubMed

Chau, Linh M; Goodisman, Michael A D

2017-12-01

Gene duplication is an important evolutionary process thought to facilitate the evolution of phenotypic diversity. We investigated if gene duplication was associated with the evolution of phenotypic differences in a highly social insect, the honeybee Apis mellifera. We hypothesized that the genetic redundancy provided by gene duplication could promote the evolution of social and sexual phenotypes associated with advanced societies. We found a positive correlation between sociality and rate of gene duplications across the Apoidea, indicating that gene duplication may be associated with sociality. We also discovered that genes showing biased expression between A. mellifera alternative phenotypes tended to be found more frequently than expected among duplicated genes than singletons. Moreover, duplicated genes had higher levels of caste-, sex-, behavior-, and tissue-biased expression compared to singletons, as expected if gene duplication facilitated phenotypic differentiation. We also found that duplicated genes were maintained in the A. mellifera genome through the processes of conservation, neofunctionalization, and specialization, but not subfunctionalization. Overall, we conclude that gene duplication may have facilitated the evolution of social and sexual phenotypes, as well as tissue differentiation. Thus this study further supports the idea that gene duplication allows species to evolve an increased range of phenotypic diversity. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

Information Mining of Spatio-Temporal Evolution of Lakes Based on Multiple Dynamic Measurements

NASA Astrophysics Data System (ADS)

Feng, W.; Chen, J.

2017-09-01

Lakes are important water resources and integral parts of the natural ecosystem, and it is of great significance to study the evolution of lakes. The area of each lake increased and decreased at the same time in natural condition, only but the net change of lakes' area is the result of the bidirectional evolution of lakes. In this paper, considering the effects of net fragmentation, net attenuation, swap change and spatial invariant part in lake evolution, a comprehensive evaluation indexes of lake dynamic evolution were defined,. Such degree contains three levels of measurement: 1) the swap dynamic degree (SDD) reflects the space activity of lakes in the study period. 2) the attenuation dynamic degree (ADD) reflects the net attenuation of lakes into non-lake areas. 3) the fragmentation dynamic degree (FDD) reflects the trend of lakes to be divided and broken into smaller lakes. Three levels of dynamic measurement constitute the three-dimensional "Swap - attenuation - fragmentation" dynamic evolution measurement system of lakes. To show its effectiveness, the dynamic measurement was applied to lakes in Jianghan Plain, the middle Yangtze region of China for a more detailed analysis of lakes from 1984 to 2014. In combination with spatial-temporal location characteristics of lakes, the hidden information in lake evolution in the past 30 years can be revealed.

Evolution of Venomous Cartilaginous and Ray-Finned Fishes.

PubMed

Smith, W Leo; Stern, Jennifer H; Girard, Matthew G; Davis, Matthew P

2016-11-01

Venom and its associated delivery systems have evolved in numerous animal groups ranging from jellyfishes to spiders, lizards, shrews, and the male platypus. Building off new data and previously published anatomical and molecular studies, we explore the evolution of and variation within venomous fishes. We show the results of the first multi-locus, ordinal-level phylogenetic analysis of cartilaginous (Chondrichthyes) and ray-finned (Actinopterygii) fishes that hypothesizes 18 independent evolutions of this specialization. Ancestral-states reconstruction indicates that among the 2386-2962 extant venomous fishes, envenomed structures have evolved four times in cartilaginous fishes, once in eels (Anguilliformes), once in catfishes (Siluriformes), and 12 times in spiny-rayed fishes (Acanthomorpha). From our anatomical studies and phylogenetic reconstruction, we show that dorsal spines are the most common envenomed structures (∼95% of venomous fish species and 15 independent evolutions). In addition to envenomed spines, fishes have also evolved venomous fangs (2% of venomous fish species, two independent evolutions), cleithral spines (2% of venomous fish species, one independent evolution), and opercular or subopercular spines (1% of venomous fish species, three independent evolutions). © The Author 2016. Published by Oxford University Press on behalf of the Society for Integrative and Comparative Biology. All rights reserved. For permissions please email: journals.permissions@oup.com.

High School Biology Teachers' Views on Teaching Evolution: Implications for Science Teacher Educators

NASA Astrophysics Data System (ADS)

Hermann, Ronald S.

2013-06-01

In the US, there may be few scientific concepts that students maintain preconceived ideas about as strongly and passionately as they do with regard to evolution. At the confluence of a multitude of social, religious, political, and scientific factors lies the biology teacher. This phenomenological study provides insight into the salient aspects of teaching evolution as viewed by public high school biology teachers. Transcribed interviews were coded, and data were sorted resulting in key themes regarding teachers' views of evolution education. These themes are presented against the backdrop of extant literature on the teaching and learning of evolution. Suggestions for science teacher educators are presented such that we can modify teacher preparation programs to better prepare science teachers to meet the challenges of teaching evolution.

Linear optics only allows every possible quantum operation for one photon or one port

NASA Astrophysics Data System (ADS)

Moyano-Fernández, Julio José; Garcia-Escartin, Juan Carlos

2017-01-01

We study the evolution of the quantum state of n photons in m different modes when they go through a lossless linear optical system. We show that there are quantum evolution operators U that cannot be built with linear optics alone unless the number of photons or the number of modes is equal to one. The evolution for single photons can be controlled with the known realization of any unitary proved by Reck, Zeilinger, Bernstein and Bertani. The evolution for a single mode corresponds to the trivial evolution in a phase shifter. We analyze these two cases and prove that any other combination of the number of photons and modes produces a Hilbert state too large for the linear optics system to give any desired evolution.

Amino acid Alphabet Size in Protein Evolution Experiments: Better to Search a Small library Thoroughly or a Large Library Sparsely?

PubMed Central

Muñoz, Enrique

2015-01-01

We compare the results obtained from searching a smaller library thoroughly versus searching a more diverse, larger library sparsely. We study protein evolution with reduced amino acid alphabets, by simulating directed evolution experiments at three different alphabet sizes: 20, 5 and 2. We employ a physical model for evolution, the generalized NK model, that has proved successful in modeling protein evolution, antibody evolution, and T cell selection. We find that antibodies with higher affinity are found by searching a library with a larger alphabet sparsely than by searching a smaller library thoroughly, even with well-designed reduced libraries. We find ranked amino acid usage frequencies in agreement with observations of the CDR-H3 variable region of human antibodies. PMID:18375453

Adapting clinical paradigms to the challenges of cancer clonal evolution.

PubMed

Murugaesu, Nirupa; Chew, Su Kit; Swanton, Charles

2013-06-01

Emerging evidence suggests that cancer branched evolution may affect biomarker validation, clinical outcome, and emergence of drug resistance. The changing spatial and temporal nature of cancer subclonal architecture during the disease course suggests the need for longitudinal prospective studies of cancer evolution and robust and clinically implementable pathologic definitions of intratumor heterogeneity, genetic diversity, and chromosomal instability. Furthermore, subclonal heterogeneous events in tumors may evade detection through conventional biomarker strategies and influence clinical outcome. Minimally invasive methods for the study of cancer evolution and new approaches to clinical study design, incorporating understanding of the dynamics of tumor clonal architectures through treatment and during acquisition of drug resistance, have been suggested as important areas for development. Coordinated efforts will be required by the scientific and clinical trial communities to adapt to the challenges of detecting infrequently occurring somatic events that may influence clinical outcome and to understand the dynamics of cancer evolution and the waxing and waning of tumor subclones over time in advanced metastatic epithelial malignancies. Copyright © 2013 American Society for Investigative Pathology. Published by Elsevier Inc. All rights reserved.

E-learning process maturity level: a conceptual framework

NASA Astrophysics Data System (ADS)

Rahmah, A.; Santoso, H. B.; Hasibuan, Z. A.

2018-03-01

ICT advancement is a sure thing with the impact influencing many domains, including learning in both formal and informal situations. It leads to a new mindset that we should not only utilize the given ICT to support the learning process, but also improve it gradually involving a lot of factors. These phenomenon is called e-learning process evolution. Accordingly, this study attempts to explore maturity level concept to provide the improvement direction gradually and progression monitoring for the individual e-learning process. Extensive literature review, observation, and forming constructs are conducted to develop a conceptual framework for e-learning process maturity level. The conceptual framework consists of learner, e-learning process, continuous improvement, evolution of e-learning process, technology, and learning objectives. Whilst, evolution of e-learning process depicted as current versus expected conditions of e-learning process maturity level. The study concludes that from the e-learning process maturity level conceptual framework, it may guide the evolution roadmap for e-learning process, accelerate the evolution, and decrease the negative impact of ICT. The conceptual framework will be verified and tested in the future study.

Scientific Results of the Nasa-sponsored Study Project on Mars: Evolution of Its Climate and Atmosphere

NASA Technical Reports Server (NTRS)

Clifford, Stephen M.; Greeley, Ronald; Haberle, Robert M.

1988-01-01

The scientific highlights of the Mars: Evolution of its Climate and Atmosphere (MECA) study project are reviewed and some of the important issues in Martian climate research that remain unresolved are discussed.

A Gene Gravity Model for the Evolution of Cancer Genomes: A Study of 3,000 Cancer Genomes across 9 Cancer Types.

PubMed

Cheng, Feixiong; Liu, Chuang; Lin, Chen-Ching; Zhao, Junfei; Jia, Peilin; Li, Wen-Hsiung; Zhao, Zhongming

2015-09-01

Cancer development and progression result from somatic evolution by an accumulation of genomic alterations. The effects of those alterations on the fitness of somatic cells lead to evolutionary adaptations such as increased cell proliferation, angiogenesis, and altered anticancer drug responses. However, there are few general mathematical models to quantitatively examine how perturbations of a single gene shape subsequent evolution of the cancer genome. In this study, we proposed the gene gravity model to study the evolution of cancer genomes by incorporating the genome-wide transcription and somatic mutation profiles of ~3,000 tumors across 9 cancer types from The Cancer Genome Atlas into a broad gene network. We found that somatic mutations of a cancer driver gene may drive cancer genome evolution by inducing mutations in other genes. This functional consequence is often generated by the combined effect of genetic and epigenetic (e.g., chromatin regulation) alterations. By quantifying cancer genome evolution using the gene gravity model, we identified six putative cancer genes (AHNAK, COL11A1, DDX3X, FAT4, STAG2, and SYNE1). The tumor genomes harboring the nonsynonymous somatic mutations in these genes had a higher mutation density at the genome level compared to the wild-type groups. Furthermore, we provided statistical evidence that hypermutation of cancer driver genes on inactive X chromosomes is a general feature in female cancer genomes. In summary, this study sheds light on the functional consequences and evolutionary characteristics of somatic mutations during tumorigenesis by propelling adaptive cancer genome evolution, which would provide new perspectives for cancer research and therapeutics.

A Gene Gravity Model for the Evolution of Cancer Genomes: A Study of 3,000 Cancer Genomes across 9 Cancer Types

PubMed Central

Lin, Chen-Ching; Zhao, Junfei; Jia, Peilin; Li, Wen-Hsiung; Zhao, Zhongming

2015-01-01

Cancer development and progression result from somatic evolution by an accumulation of genomic alterations. The effects of those alterations on the fitness of somatic cells lead to evolutionary adaptations such as increased cell proliferation, angiogenesis, and altered anticancer drug responses. However, there are few general mathematical models to quantitatively examine how perturbations of a single gene shape subsequent evolution of the cancer genome. In this study, we proposed the gene gravity model to study the evolution of cancer genomes by incorporating the genome-wide transcription and somatic mutation profiles of ~3,000 tumors across 9 cancer types from The Cancer Genome Atlas into a broad gene network. We found that somatic mutations of a cancer driver gene may drive cancer genome evolution by inducing mutations in other genes. This functional consequence is often generated by the combined effect of genetic and epigenetic (e.g., chromatin regulation) alterations. By quantifying cancer genome evolution using the gene gravity model, we identified six putative cancer genes (AHNAK, COL11A1, DDX3X, FAT4, STAG2, and SYNE1). The tumor genomes harboring the nonsynonymous somatic mutations in these genes had a higher mutation density at the genome level compared to the wild-type groups. Furthermore, we provided statistical evidence that hypermutation of cancer driver genes on inactive X chromosomes is a general feature in female cancer genomes. In summary, this study sheds light on the functional consequences and evolutionary characteristics of somatic mutations during tumorigenesis by propelling adaptive cancer genome evolution, which would provide new perspectives for cancer research and therapeutics. PMID:26352260

Genomewide analysis of reassortment and evolution of human influenza A(H3N2) viruses circulating between 1968 and 2011.

PubMed

Westgeest, Kim B; Russell, Colin A; Lin, Xudong; Spronken, Monique I J; Bestebroer, Theo M; Bahl, Justin; van Beek, Ruud; Skepner, Eugene; Halpin, Rebecca A; de Jong, Jan C; Rimmelzwaan, Guus F; Osterhaus, Albert D M E; Smith, Derek J; Wentworth, David E; Fouchier, Ron A M; de Graaf, Miranda

2014-03-01

Influenza A(H3N2) viruses became widespread in humans during the 1968 H3N2 virus pandemic and have been a major cause of influenza epidemics ever since. These viruses evolve continuously by reassortment and genomic evolution. Antigenic drift is the cause for the need to update influenza vaccines frequently. Using two data sets that span the entire period of circulation of human influenza A(H3N2) viruses, it was shown that influenza A(H3N2) virus evolution can be mapped to 13 antigenic clusters. Here we analyzed the full genomes of 286 influenza A(H3N2) viruses from these two data sets to investigate the genomic evolution and reassortment patterns. Numerous reassortment events were found, scattered over the entire period of virus circulation, but most prominently in viruses circulating between 1991 and 1998. Some of these reassortment events persisted over time, and one of these coincided with an antigenic cluster transition. Furthermore, selection pressures and nucleotide and amino acid substitution rates of all proteins were studied, including those of the recently discovered PB1-N40, PA-X, PA-N155, and PA-N182 proteins. Rates of nucleotide and amino acid substitutions were most pronounced for the hemagglutinin, neuraminidase, and PB1-F2 proteins. Selection pressures were highest in hemagglutinin, neuraminidase, matrix 1, and nonstructural protein 1. This study of genotype in relation to antigenic phenotype throughout the period of circulation of human influenza A(H3N2) viruses leads to a better understanding of the evolution of these viruses. Each winter, influenza virus infects approximately 5 to 15% of the world's population, resulting in significant morbidity and mortality. Influenza A(H3N2) viruses evolve continuously by reassortment and genomic evolution. This leads to changes in antigenic recognition (antigenic drift) which make it necessary to update vaccines against influenza A(H3N2) viruses frequently. In this study, the relationship of genetic evolution to antigenic change spanning the entire period of A(H3N2) virus circulation was studied for the first time. The results presented in this study contribute to a better understanding of genetic evolution in correlation with antigenic evolution of influenza A(H3N2) viruses.

Formal Definitions of Unbounded Evolution and Innovation Reveal Universal Mechanisms for Open-Ended Evolution in Dynamical Systems.

PubMed

Adams, Alyssa; Zenil, Hector; Davies, Paul C W; Walker, Sara Imari

2017-04-20

Open-ended evolution (OEE) is relevant to a variety of biological, artificial and technological systems, but has been challenging to reproduce in silico. Most theoretical efforts focus on key aspects of open-ended evolution as it appears in biology. We recast the problem as a more general one in dynamical systems theory, providing simple criteria for open-ended evolution based on two hallmark features: unbounded evolution and innovation. We define unbounded evolution as patterns that are non-repeating within the expected Poincare recurrence time of an isolated system, and innovation as trajectories not observed in isolated systems. As a case study, we implement novel variants of cellular automata (CA) where the update rules are allowed to vary with time in three alternative ways. Each is capable of generating conditions for open-ended evolution, but vary in their ability to do so. We find that state-dependent dynamics, regarded as a hallmark of life, statistically out-performs other candidate mechanisms, and is the only mechanism to produce open-ended evolution in a scalable manner, essential to the notion of ongoing evolution. This analysis suggests a new framework for unifying mechanisms for generating OEE with features distinctive to life and its artifacts, with broad applicability to biological and artificial systems.

Learning Evolution and the Nature of Science Using Evolutionary Computing and Artificial Life

ERIC Educational Resources Information Center

Pennock, Robert T.

2007-01-01

Because evolution in natural systems happens so slowly, it is difficult to design inquiry-based labs where students can experiment and observe evolution in the way they can when studying other phenomena. New research in evolutionary computation and artificial life provides a solution to this problem. This paper describes a new A-Life software…

Parent-Child Conversations about Evolution in the Context of an Interactive Museum Display

ERIC Educational Resources Information Center

Shtulman, Andrew; Checa, Isabel

2012-01-01

The theory of evolution by natural selection has revolutionized the biological sciences yet remains confusing and controversial to the public at large. This study explored how a particular segment of the public--visitors to a natural history museum--reason about evolution in the context of an interactive cladogram, or evolutionary tree. The…

Changes in Acceptance of Evolution in a College-Level General Education Course

ERIC Educational Resources Information Center

Grossman, W. Eric; Fleet, Christine M.

2017-01-01

Evolutionary theory is central to the biological sciences, and to critical aspects of everyday life, and yet a significant proportion of Americans reject evolution. Our study sets out to examine the role of a second year college general education course in affecting students' acceptance of evolution. We report three years of data using the Measure…

The Use of Narrative to Promote Primary School Children's Understanding of Evolution

ERIC Educational Resources Information Center

Browning, Emma; Hohenstein, Jill

2015-01-01

This study explores learning about evolution when information is presented in either a narrative or an expository text (ET). Narratives engage the imagination, and consequently may allow children to overcome conceptual constraints that make evolution difficult to comprehend. Participants were 16 Year One, 21 Year Two and 25 Year Three pupils from…

The Mismatch among Students' Views about Nature of Science, Acceptance of Evolution, and Evolutionary Science Understandings

ERIC Educational Resources Information Center

Cavallo, Ann M. L.; White, Kevin J.; McCall, David

2011-01-01

This study explored interrelationships among high school students' views about nature of science (NOS), acceptance of evolution, and conceptual understanding of evolution, and the extent to which these may have shifted from pre- to post-instruction on evolutionary theory. Eighty-one students enrolled in ninth-grade Biology responded to…

Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat

USDA-ARS?s Scientific Manuscript database

Cycles of whole genome duplication (WGD) and diploidization are hallmarks of eukaryotic genome evolution and speciation. Polyploid wheat (Triticum aestivum) has had a massive increase in genome size largely due to recent WGDs. How these processes may impact the dynamics of gene evolution was studied...

Biology Students' and Teachers' Religious Beliefs and Attitudes towards Theory of Evolution

ERIC Educational Resources Information Center

Ozay Kose, Esra

2010-01-01

Evolution has not being well addressed in schools partly because it is a controversial topic in religious views. In the present study, it is explored to what extent Turkish secondary school biology teachers and students accommodate the theory of biological evolution with their religious beliefs. Two-hundred fifty secondary school students and…

Perceptions of High School Biology Teachers in Christian Schools on Relationships between Religious Beliefs and Teaching Evolution

ERIC Educational Resources Information Center

Mangahas, Ana Marie E.

2017-01-01

This mixed method study explored Christian teachers' beliefs in religious schools on evolution, their attitudes toward evolution, and their perceptions on the effect of those beliefs on the teaching of evolutionary content. Teachers (N = 52) from Association for Christian Schools International (ACSI) accredited schools in California and Hawaii…

A new chromosome was born: comparative chromosome painting in Boechera.

PubMed

Koch, Marcus A

2015-09-01

Comparative chromosome painting is a powerful tool to study the evolution of chromosomes and genomes. Analyzing karyotype evolution in cruciferous plants highlights the origin of aberrant chromosomes in apomictic Boechera and further establishes the cruciferous plants as important model system for our understanding of plant chromosome and genome evolution. Copyright © 2015 Elsevier Ltd. All rights reserved.

The GAENE--Generalized Acceptance of EvolutioN Evaluation: Development of a New Measure of Evolution Acceptance

ERIC Educational Resources Information Center

Smith, Mike U.; Snyder, Scott W.; Devereaux, Randolph S.

2016-01-01

The present study reports the development of a brief, quantitative, web-based, psychometrically sound measure--the Generalized Acceptance of EvolutioN Evaluation (GAENE, pronounced "gene") in a format that is useful in large and small groups, in research, and in classroom settings. The measure was designed to measure only evolution…

College Students' Use of Science Content during Socioscientific Issues Negotiation: Impact of Evolution Understanding and Acceptance

ERIC Educational Resources Information Center

Fowler, Samantha R.

2009-01-01

The purpose of this study was to explore the evolution science content used during college students' negotiation of biology-based socioscientific issues (SSI) and examine how it related to students' conceptual understanding and acceptance of biological evolution. Specific research questions were, (1a) what specific evolutionary science content do…

Introducing Preservice Teachers to Issues Surrounding Evolution and Creationism via a Mock Trial.

ERIC Educational Resources Information Center

Helgeson, Lars J.; Hoover, John; Sheehan, James

2002-01-01

Describes cooperation between social studies and science education professors to introduce preservice teachers to the evolution versus creationism debate via a mock trial. Uses a hypothetical situation in which a 6th grade teacher was fired for not balancing evolution and creationism in his teaching. Reports that the mock trial slightly increased…

Darwinian perspectives on the evolution of human languages.

PubMed

Pagel, Mark

2017-02-01

Human languages evolve by a process of descent with modification in which parent languages give rise to daughter languages over time and in a manner that mimics the evolution of biological species. Descent with modification is just one of many parallels between biological and linguistic evolution that, taken together, offer up a Darwinian perspective on how languages evolve. Combined with statistical methods borrowed from evolutionary biology, this Darwinian perspective has brought new opportunities to the study of the evolution of human languages. These include the statistical inference of phylogenetic trees of languages, the study of how linguistic traits evolve over thousands of years of language change, the reconstruction of ancestral or proto-languages, and using language change to date historical events.

Using Decision Structures for Policy Analysis in Software Product-line Evolution - A Case Study

NASA Astrophysics Data System (ADS)

Sarang, Nita; Sanglikar, Mukund A.

Project management decisions are the primary basis for project success (or failure). Mostly, such decisions are based on an intuitive understanding of the underlying software engineering and management process and have a likelihood of being misjudged. Our problem domain is product-line evolution. We model the dynamics of the process by incorporating feedback loops appropriate to two decision structures: staffing policy, and the forces of growth associated with long-term software evolution. The model is executable and supports project managers to assess the long-term effects of possible actions. Our work also corroborates results from earlier studies of E-type systems, in particular the FEAST project and the rules for software evolution, planning and management.

Microcephaly genes evolved adaptively throughout the evolution of eutherian mammals

PubMed Central

2014-01-01

Background Genes associated with the neurodevelopmental disorder microcephaly display a strong signature of adaptive evolution in primates. Comparative data suggest a link between selection on some of these loci and the evolution of primate brain size. Whether or not either positive selection or this phenotypic association are unique to primates is unclear, but recent studies in cetaceans suggest at least two microcephaly genes evolved adaptively in other large brained mammalian clades. Results Here we analyse the evolution of seven microcephaly loci, including three recently identified loci, across 33 eutherian mammals. We find extensive evidence for positive selection having acted on the majority of these loci not just in primates but also across non-primate mammals. Furthermore, the patterns of selection in major mammalian clades are not significantly different. Using phylogenetically corrected comparative analyses, we find that the evolution of two microcephaly loci, ASPM and CDK5RAP2, are correlated with neonatal brain size in Glires and Euungulata, the two most densely sampled non-primate clades. Conclusions Together with previous results, this suggests that ASPM and CDK5RAP2 may have had a consistent role in the evolution of brain size in mammals. Nevertheless, several limitations of currently available data and gene-phenotype tests are discussed, including sparse sampling across large evolutionary distances, averaging gene-wide rates of evolution, potential phenotypic variation and evolutionary reversals. We discuss the implications of our results for studies of the genetic basis of brain evolution, and explicit tests of gene-phenotype hypotheses. PMID:24898820

Darwinian evolution in the light of genomics

PubMed Central

Koonin, Eugene V.

2009-01-01

Comparative genomics and systems biology offer unprecedented opportunities for testing central tenets of evolutionary biology formulated by Darwin in the Origin of Species in 1859 and expanded in the Modern Synthesis 100 years later. Evolutionary-genomic studies show that natural selection is only one of the forces that shape genome evolution and is not quantitatively dominant, whereas non-adaptive processes are much more prominent than previously suspected. Major contributions of horizontal gene transfer and diverse selfish genetic elements to genome evolution undermine the Tree of Life concept. An adequate depiction of evolution requires the more complex concept of a network or ‘forest’ of life. There is no consistent tendency of evolution towards increased genomic complexity, and when complexity increases, this appears to be a non-adaptive consequence of evolution under weak purifying selection rather than an adaptation. Several universals of genome evolution were discovered including the invariant distributions of evolutionary rates among orthologous genes from diverse genomes and of paralogous gene family sizes, and the negative correlation between gene expression level and sequence evolution rate. Simple, non-adaptive models of evolution explain some of these universals, suggesting that a new synthesis of evolutionary biology might become feasible in a not so remote future. PMID:19213802

Uniparental Inheritance Promotes Adaptive Evolution in Cytoplasmic Genomes.

PubMed

Christie, Joshua R; Beekman, Madeleine

2017-03-01

Eukaryotes carry numerous asexual cytoplasmic genomes (mitochondria and plastids). Lacking recombination, asexual genomes should theoretically suffer from impaired adaptive evolution. Yet, empirical evidence indicates that cytoplasmic genomes experience higher levels of adaptive evolution than predicted by theory. In this study, we use a computational model to show that the unique biology of cytoplasmic genomes-specifically their organization into host cells and their uniparental (maternal) inheritance-enable them to undergo effective adaptive evolution. Uniparental inheritance of cytoplasmic genomes decreases competition between different beneficial substitutions (clonal interference), promoting the accumulation of beneficial substitutions. Uniparental inheritance also facilitates selection against deleterious cytoplasmic substitutions, slowing Muller's ratchet. In addition, uniparental inheritance generally reduces genetic hitchhiking of deleterious substitutions during selective sweeps. Overall, uniparental inheritance promotes adaptive evolution by increasing the level of beneficial substitutions relative to deleterious substitutions. When we assume that cytoplasmic genome inheritance is biparental, decreasing the number of genomes transmitted during gametogenesis (bottleneck) aids adaptive evolution. Nevertheless, adaptive evolution is always more efficient when inheritance is uniparental. Our findings explain empirical observations that cytoplasmic genomes-despite their asexual mode of reproduction-can readily undergo adaptive evolution. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Uniparental Inheritance Promotes Adaptive Evolution in Cytoplasmic Genomes

PubMed Central

Christie, Joshua R.; Beekman, Madeleine

2017-01-01

Eukaryotes carry numerous asexual cytoplasmic genomes (mitochondria and plastids). Lacking recombination, asexual genomes should theoretically suffer from impaired adaptive evolution. Yet, empirical evidence indicates that cytoplasmic genomes experience higher levels of adaptive evolution than predicted by theory. In this study, we use a computational model to show that the unique biology of cytoplasmic genomes—specifically their organization into host cells and their uniparental (maternal) inheritance—enable them to undergo effective adaptive evolution. Uniparental inheritance of cytoplasmic genomes decreases competition between different beneficial substitutions (clonal interference), promoting the accumulation of beneficial substitutions. Uniparental inheritance also facilitates selection against deleterious cytoplasmic substitutions, slowing Muller’s ratchet. In addition, uniparental inheritance generally reduces genetic hitchhiking of deleterious substitutions during selective sweeps. Overall, uniparental inheritance promotes adaptive evolution by increasing the level of beneficial substitutions relative to deleterious substitutions. When we assume that cytoplasmic genome inheritance is biparental, decreasing the number of genomes transmitted during gametogenesis (bottleneck) aids adaptive evolution. Nevertheless, adaptive evolution is always more efficient when inheritance is uniparental. Our findings explain empirical observations that cytoplasmic genomes—despite their asexual mode of reproduction—can readily undergo adaptive evolution. PMID:28025277

Strategic Foresight Process - Improvements for the Hungarian Ministry of Defense

DTIC Science & Technology

2016-06-01

enough to appropriately prepare for the migration crisis. This thesis introduces the evolution and main concepts of Futures Studies and Foresight. It...to appropriately prepare for the migration crisis. This thesis introduces the evolution and main concepts of Futures Studies and Foresight. It...STRATEGIC FORESIGHT .................................................................................3  A.  FUTURES STUDIES

Within-Host Evolution of Human Influenza Virus.

PubMed

Xue, Katherine S; Moncla, Louise H; Bedford, Trevor; Bloom, Jesse D

2018-03-10

The rapid global evolution of influenza virus begins with mutations that arise de novo in individual infections, but little is known about how evolution occurs within hosts. We review recent progress in understanding how and why influenza viruses evolve within human hosts. Advances in deep sequencing make it possible to measure within-host genetic diversity in both acute and chronic influenza infections. Factors like antigenic selection, antiviral treatment, tissue specificity, spatial structure, and multiplicity of infection may affect how influenza viruses evolve within human hosts. Studies of within-host evolution can contribute to our understanding of the evolutionary and epidemiological factors that shape influenza virus's global evolution. Copyright © 2018 Elsevier Ltd. All rights reserved.

Wolf-Rayet stars, black holes and the first detected gravitational wave source

NASA Astrophysics Data System (ADS)

Bogomazov, A. I.; Cherepashchuk, A. M.; Lipunov, V. M.; Tutukov, A. V.

2018-01-01

The recently discovered burst of gravitational waves GW150914 provides a good new chance to verify the current view on the evolution of close binary stars. Modern population synthesis codes help to study this evolution from two main sequence stars up to the formation of two final remnant degenerate dwarfs, neutron stars or black holes (Masevich and Tutukov, 1988). To study the evolution of the GW150914 predecessor we use the ;Scenario Machine; code presented by Lipunov et al. (1996). The scenario modeling conducted in this study allowed to describe the evolution of systems for which the final stage is a massive BH+BH merger. We find that the initial mass of the primary component can be 100÷140M⊙ and the initial separation of the components can be 50÷350R⊙. Our calculations show the plausibility of modern evolutionary scenarios for binary stars and the population synthesis modeling based on it.

Bacterial flagella and Type III secretion: case studies in the evolution of complexity.

PubMed

Pallen, M J; Gophna, U

2007-01-01

Bacterial flagella at first sight appear uniquely sophisticated in structure, so much so that they have even been considered 'irreducibly complex' by the intelligent design movement. However, a more detailed analysis reveals that these remarkable pieces of molecular machinery are the product of processes that are fully compatible with Darwinian evolution. In this chapter we present evidence for such processes, based on a review of experimental studies, molecular phylogeny and microbial genomics. Several processes have played important roles in flagellar evolution: self-assembly of simple repeating subunits, gene duplication with subsequent divergence, recruitment of elements from other systems ('molecular bricolage'), and recombination. We also discuss additional tentative new assignments of homology (FliG with MgtE, FliO with YscJ). In conclusion, rather than providing evidence of intelligent design, flagellar and non-flagellar Type III secretion systems instead provide excellent case studies in the evolution of complex systems from simpler components.

Understanding Student Approaches to Learning Evolution in the Context of their Perceptions of the Relationship between Science and Religion

NASA Astrophysics Data System (ADS)

Yasri, Pratchayapong; Mancy, Rebecca

2014-01-01

This study investigates a range of positions that learners take on the relationship between science and religion and the potential for these positions to explain student approaches when learning about evolution. A phenomenographic study based on interviews with nine students studying in Christian high schools in Thailand led to the identification of five distinct positions on the relationship between science and religion. Each position was associated with a characteristic pattern of learning about evolution that could be explained as an attempt by the students to align their particular learning approach with their position. Three of the positions have the potential to support scientifically valid understandings of evolution while avoiding emotional conflict. We suggest that knowledge of the range of positions and associated learning approaches can help educators to focus on the form and timing of support of benefit to those holding different viewpoints.

Evolution Analysis of Simple Sequence Repeats in Plant Genome.

PubMed

Qin, Zhen; Wang, Yanping; Wang, Qingmei; Li, Aixian; Hou, Fuyun; Zhang, Liming

2015-01-01

Simple sequence repeats (SSRs) are widespread units on genome sequences, and play many important roles in plants. In order to reveal the evolution of plant genomes, we investigated the evolutionary regularities of SSRs during the evolution of plant species and the plant kingdom by analysis of twelve sequenced plant genome sequences. First, in the twelve studied plant genomes, the main SSRs were those which contain repeats of 1-3 nucleotides combination. Second, in mononucleotide SSRs, the A/T percentage gradually increased along with the evolution of plants (except for P. patens). With the increase of SSRs repeat number the percentage of A/T in C. reinhardtii had no significant change, while the percentage of A/T in terrestrial plants species gradually declined. Third, in dinucleotide SSRs, the percentage of AT/TA increased along with the evolution of plant kingdom and the repeat number increased in terrestrial plants species. This trend was more obvious in dicotyledon than monocotyledon. The percentage of CG/GC showed the opposite pattern to the AT/TA. Forth, in trinucleotide SSRs, the percentages of combinations including two or three A/T were in a rising trend along with the evolution of plant kingdom; meanwhile with the increase of SSRs repeat number in plants species, different species chose different combinations as dominant SSRs. SSRs in C. reinhardtii, P. patens, Z. mays and A. thaliana showed their specific patterns related to evolutionary position or specific changes of genome sequences. The results showed that, SSRs not only had the general pattern in the evolution of plant kingdom, but also were associated with the evolution of the specific genome sequence. The study of the evolutionary regularities of SSRs provided new insights for the analysis of the plant genome evolution.

Temporal and spatial evolution characteristics of water environment quality in Heze

NASA Astrophysics Data System (ADS)

Gao, Qian; Zhao, Qiang; Li, Xiumei

2018-06-01

The evolution of water environment is relatively complicated. The study of its characteristics is helpful to grasp the general direction of spatial and temporal evolution of water environment in Heze city, and to carry out water resources development and water environment protection more rationally. The comprehensive pollution index method for calculation, and the observed data are handled by Excel. In order to facilitate the analysis of the basin, Arcgis is utilized to map the watershed map. In addition, for the spatial evolution, surfer12 is used to analyze the spatial evolution characteristics the spatial evolution, and to draw the pictures of spatial evolution of chemical oxygen demand and water quality evolution. The study shows that: (1) In Heze, the quality of water environment has been improved year by year from 2006 to 2013. In 2014, the water environment has deteriorated. The content of volatile phenol has increased greatly, and the evolution trend of COD is close to the trend of the comprehensive pollution index. (2) In terms of Spatial state of water environment, the water quality of Zhuzhao New River and Wanfu River is poor, and Dongyu River water quality is better. Zhuzhao New River and Wanfu River water qualityis often worse than grade V or V, and Dongyu River water quality is mostly maintained in the grade Ⅳ. Through the analysis on the spatial revolution characteristics of water quality and chemical oxygen demand(COD),as a result, water quality is poor in the northern region,and the water quality in the southern region is better in Heze. Although the water quality has changed in recent years, the overall pattern is relatively stable.

The effects of self-interstitial clusters on cascade defect evolution beyond the primary damage state

DOE Office of Scientific and Technical Information (OSTI.GOV)

Heinisch, H.L.

1997-04-01

The intracascade evolution of the defect distributions of cascades in copper is investigated using stochastic annealing simulations applied to cascades generated with molecular dynamics (MD). The temperature and energy dependencies of annihilation, clustering and free defect production are determined for individual cascades. The annealing simulation results illustrate the strong influence on intracascade evolution of the defect configuration existing in the primary damage state. Another factor significantly affecting the evolution of the defect distribution is the rapid one-dimensional diffusion of small, glissile interstitial loops produced directly in cascades. This phenomenon introduces a cascade energy dependence of defect evolution that is apparentmore » only beyond the primary damage state, amplifying the need for further study of the annealing phase of cascade evolution and for performing many more MD cascade simulations at higher energies.« less

Item Feature Effects in Evolution Assessment

ERIC Educational Resources Information Center

Nehm, Ross H.; Ha, Minsu

2011-01-01

Despite concerted efforts by science educators to understand patterns of evolutionary reasoning in science students and teachers, the vast majority of evolution education studies have failed to carefully consider or control for item feature effects in knowledge measurement. Our study explores whether robust contextualization patterns emerge within…

Unpredictable evolution in a 30-year study of Darwin's finches.

PubMed

Grant, Peter R; Grant, B Rosemary

2002-04-26

Evolution can be predicted in the short term from a knowledge of selection and inheritance. However, in the long term evolution is unpredictable because environments, which determine the directions and magnitudes of selection coefficients, fluctuate unpredictably. These two features of evolution, the predictable and unpredictable, are demonstrated in a study of two populations of Darwin's finches on the Galápagos island of Daphne Major. From 1972 to 2001, Geospiza fortis (medium ground finch) and Geospiza scandens (cactus finch) changed several times in body size and two beak traits. Natural selection occurred frequently in both species and varied from unidirectional to oscillating, episodic to gradual. Hybridization occurred repeatedly though rarely, resulting in elevated phenotypic variances in G. scandens and a change in beak shape. The phenotypic states of both species at the end of the 30-year study could not have been predicted at the beginning. Continuous, long-term studies are needed to detect and interpret rare but important events and nonuniform evolutionary change.

Evolution of vacuum bubbles embedded in inhomogeneous spacetimes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pannia, Florencia Anabella Teppa; Bergliaffa, Santiago Esteban Perez, E-mail: fteppa@fcaglp.unlp.edu.ar, E-mail: sepbergliaffa@gmail.com

We study the propagation of bubbles of new vacuum in a radially inhomogeneous background filled with dust or radiation, and including a cosmological constant, as a first step in the analysis of the influence of inhomogeneities in the evolution of an inflating region. We also compare the cases with dust and radiation backgrounds and show that the evolution of the bubble in radiation environments is notably different from that in the corresponding dust cases, both for homogeneous and inhomogeneous ambients, leading to appreciable differences in the evolution of the proper radius of the bubble.

Artificial evolution: a new path for artificial intelligence?

PubMed

Husbands, P; Harvey, I; Cliff, D; Miller, G

1997-06-01

Recently there have been a number of proposals for the use of artificial evolution as a radically new approach to the development of control systems for autonomous robots. This paper explains the artificial evolution approach, using work at Sussex to illustrate it. The paper revolves around a case study on the concurrent evolution of control networks and visual sensor morphologies for a mobile robot. Wider intellectual issues surrounding the work are discussed, as is the use of more abstract evolutionary simulations as a new potentially useful tool in theoretical biology.

Influence of particle shape on the microstructure evolution and the mechanical properties of granular materials

NASA Astrophysics Data System (ADS)

Tian, Jianqiu; Liu, Enlong; Jiang, Lian; Jiang, Xiaoqiong; Sun, Yi; Xu, Ran

2018-06-01

In order to study the influence of particle shape on the microstructure evolution and the mechanical properties of granular materials, a two-dimensional DEM analysis of samples with three particle shapes, including circular particles, triangular particles, and elongated particles, is proposed here to simulate the direct shear tests of coarse-grained soils. For the numerical test results, analyses are conducted in terms of particle rotations, fabric evolution, and average path length evolution. A modified Rowe's stress-dilatancy equation is also proposed and successfully fitted onto simulation data.

White dwarf evolution - Cradle-to-grave constraints via pulsation

NASA Technical Reports Server (NTRS)

Kawaler, Steven D.

1990-01-01

White dwarf evolution, particularly in the early phases, is not very strongly constrained by observation. Fortunately, white dwarfs undergo nonradial pulsation in three distinct regions of the H-R diagram. These pulsations provide accurate masses, surface compositional structure and rotation velocities, and help constrain other important physical properties. We demonstrate the application of the tools of stellar seismology to white dwarf evolution using the hot white dwarf star PG 1159-035 and the cool DAV (or ZZ Ceti) stars as examples. From pulsation studies, significant challenges to the theory of white dwarf evolution emerge.

High school biology evolution learning experiences in a rural context: a case of and for cultural border crossing

NASA Astrophysics Data System (ADS)

Borgerding, Lisa A.

2017-03-01

Although the concept of "rural" is difficult to define, rural science education provides the possibility for learning centered upon a strong connection to the local community. Rural American adolescents tend to be more religious than their urban counterparts and less accepting of evolution than their non-rural peers. Because the status and perception of evolutionary theory may be very different within the students' lifeworlds and the subcultures of the science classroom and science itself, a cultural border crossing metaphor can be applied to evolution teaching and learning. This study examines how a teacher may serve as a cultural border crossing tour guide for students at a rural high school as they explore the concept of biological evolution in their high school biology class. Data collection entailed two formal teacher interviews, field note observations of two biology class periods each day for 16 days during the Evolution unit, individual interviews with 14 students, student evolution acceptance surveys, student evolution content tests, and classroom artifacts. The major findings center upon three themes regarding how this teacher and these students had largely positive evolution learning experiences even as some students continued to reject evolution. First, the teacher strategically positioned himself in two ways: using his unique "local" trusted position in the community and school and taking a position in which he did not personally represent science by instead consistently teaching evolution "according to scientists." Second, his instruction honored local "rural" funds of knowledge with respect to local knowledge of nature and by treating students' religious knowledge as a form of local expertise about one set of answers to questions also addressed by evolution. Third, the teacher served as a border crossing "tour guide" by helping students identify how the culture of science and the culture of their lifeworlds may differ with respect to evolutionary theory. Students negotiated the cultural borders for learning evolution in several ways, and different types of border crossings are described. The students respected the teacher's apparent neutrality, sensitivity toward multiple positions, explicit attention to religion/evolution, and transparency of purposes for teaching evolution. These findings add to the current literature on rural science education by highlighting local funds of knowledge for evolution learning and how rural teachers may help students navigate seemingly hazardous scientific topics. The study's findings also add to the current evolution education literature by examining how students' religious perspectives may be respected as a form of expertise about questions of origins by allowing students to examine similarities and differences between scientific and religious approaches to questions of biological origins and change.

Gamma-ray luminosity and photon index evolution of FSRQ blazars and contribution to the gamma-ray background

DOE Office of Scientific and Technical Information (OSTI.GOV)

Singal, J.; Ko, A.; Petrosian, V., E-mail: jsingal@richmond.edu

We present the redshift evolutions and distributions of the gamma-ray luminosity and photon spectral index of flat spectrum radio quasar (FSRQ) type blazars, using non-parametric methods to obtain the evolutions and distributions directly from the data. The sample we use for analysis consists of almost all FSRQs observed with a greater than approximately 7σ detection threshold in the first-year catalog of the Fermi Gamma-ray Space Telescope's Large Area Telescope, with redshifts as determined from optical spectroscopy by Shaw et al. We find that FSQRs undergo rapid gamma-ray luminosity evolution, but negligible photon index evolution, with redshift. With these evolutions accountedmore » for we determine the density evolution and luminosity function of FSRQs and calculate their total contribution to the extragalactic gamma-ray background radiation, resolved and unresolved, which is found to be 16(+10/–4)%, in agreement with previous studies.« less

The impact of rapid evolution on population dynamics in the wild: experimental test of eco-evolutionary dynamics.

PubMed

Turcotte, Martin M; Reznick, David N; Hare, J Daniel

2011-11-01

Rapid evolution challenges the assumption that evolution is too slow to impact short-term ecological dynamics. This insight motivates the study of 'Eco-Evolutionary Dynamics' or how evolution and ecological processes reciprocally interact on short time scales. We tested how rapid evolution impacts concurrent population dynamics using an aphid (Myzus persicae) and an undomesticated host (Hirschfeldia incana) in replicated wild populations. We manipulated evolvability by creating non-evolving (single clone) and potentially evolving (two-clone) aphid populations that contained genetic variation in intrinsic growth rate. We observed significant evolution in two-clone populations whether or not they were exposed to predators and competitors. Evolving populations grew up to 42% faster and attained up to 67% higher density, compared with non-evolving control populations but only in treatments exposed to competitors and predators. Increased density also correlates with relative fitness of competing clones suggesting a full eco-evolutionary dynamic cycle defined as reciprocal interactions between evolution and density. © 2011 Blackwell Publishing Ltd/CNRS.

The definition, recognition, and interpretation of convergent evolution, and two new measures for quantifying and assessing the significance of convergence.

PubMed

Stayton, C Tristan

2015-08-01

Convergent evolution is an important phenomenon in the history of life. Despite this, there is no common definition of convergence used by biologists. Instead, several conceptually different definitions are employed. The primary dichotomy is between pattern-based definitions, where independently evolved similarity is sufficient for convergence, and process-based definitions, where convergence requires a certain process to produce this similarity. The unacknowledged diversity of definitions can lead to problems in evolutionary research. Process-based definitions may bias researchers away from studying or recognizing other sources of independently evolved similarity, or lead researchers to interpret convergent patterns as necessarily caused by a given process. Thus, pattern-based definitions are recommended. Existing measures of convergence are reviewed, and two new measures are developed. Both are pattern based and conceptually minimal, quantifying nothing but independently evolved similarity. One quantifies the amount of phenotypic distance between two lineages that is closed by subsequent evolution; the other simply counts the number of lineages entering a region of phenotypic space. The behavior of these measures is explored in simulations; both show acceptable Type I and Type II error. The study of convergent evolution will be facilitated if researchers are explicit about working definitions of convergence and adopt a standard toolbox of convergence measures. © 2015 The Author(s). Evolution © 2015 The Society for the Study of Evolution.

The importance of mechanisms for the evolution of cooperation

PubMed Central

van den Berg, Pieter; Weissing, Franz J.

2015-01-01

Studies aimed at explaining the evolution of phenotypic traits have often solely focused on fitness considerations, ignoring underlying mechanisms. In recent years, there has been an increasing call for integrating mechanistic perspectives in evolutionary considerations, but it is not clear whether and how mechanisms affect the course and outcome of evolution. To study this, we compare four mechanistic implementations of two well-studied models for the evolution of cooperation, the Iterated Prisoner's Dilemma (IPD) game and the Iterated Snowdrift (ISD) game. Behavioural strategies are either implemented by a 1 : 1 genotype–phenotype mapping or by a simple neural network. Moreover, we consider two different scenarios for the effect of mutations. The same set of strategies is feasible in all four implementations, but the probability that a given strategy arises owing to mutation is largely dependent on the behavioural and genetic architecture. Our individual-based simulations show that this has major implications for the evolutionary outcome. In the ISD, different evolutionarily stable strategies are predominant in the four implementations, while in the IPD each implementation creates a characteristic dynamical pattern. As a consequence, the evolved average level of cooperation is also strongly dependent on the underlying mechanism. We argue that our findings are of general relevance for the evolution of social behaviour, pleading for the integration of a mechanistic perspective in models of social evolution. PMID:26246554

Continuously growing rodent molars result from a predictable quantitative evolutionary change over 50 million years

PubMed Central

Mushegyan, Vagan; Eronen, Jussi T.; Lawing, A. Michelle; Sharir, Amnon; Janis, Christine; Jernvall, Jukka; Klein, Ophir D.

2015-01-01

Summary The fossil record is widely informative about evolution, but fossils are not systematically used to study the evolution of stem cell-driven renewal. Here, we examined evolution of the continuous growth (hypselodonty) of rodent molar teeth, which is fuelled by the presence of dental stem cells. We studied occurrences of 3500 North American rodent fossils, ranging from 50 million years ago (mya) to 2 mya. We examined changes in molar height to determine if evolution of hypselodonty shows distinct patterns in the fossil record, and we found that hypselodont taxa emerged through intermediate forms of increasing crown height. Next, we designed a Markov simulation model, which replicated molar height increases throughout the Cenozoic, and, moreover, evolution of hypselodonty. Thus, by extension, the retention of the adult stem-cell niche appears to be a predictable quantitative rather than a stochastic qualitative process. Our analyses predict that hypselodonty will eventually become the dominant phenotype. PMID:25921530

Preparing Preservice K-8 Teachers for the Public School: Improving Evolution Attitudes, Misconceptions, and Legal Confusion

ERIC Educational Resources Information Center

Vaughn, Ashley R.; Robbins, Jennifer R.

2017-01-01

Evolutionary theory is a central tenet of biological science, and it is essential for all science teachers, early childhood through secondary, to have a clear understanding of not only the science behind evolution, but also the legal precedents for teaching evolution in the classroom. This study examines the effectiveness of a curriculum on…

Evolution in the Southeastern USA: Factors Influencing Acceptance and Rejection in Pre-Service Science Teachers

ERIC Educational Resources Information Center

Glaze, Amanda L.; Goldston, M. Jenice; Dantzler, John

2015-01-01

Evolution continues to be a controversial topic around the world but nowhere is this more apparent locally than in the Southeastern region of the USA. In this study, we explored acceptance and rejection of evolution among pre-service science teachers in a teaching college in the rural Southeast and sought to determine (1) what relationships exist…

Knowledge of and Attitudes toward Evolution in a Population of Community College Students

ERIC Educational Resources Information Center

Flower, Patricia

2006-01-01

Much attention has been given to the opposition toward the teaching of evolution at the K-12 level and the movement to include alternative theories, such as Intelligent Design (ID), in the science curriculum. However, very little is known regarding the attitudes of community college students toward the study of evolution and the inclusion of ID in…

Surface phenomena and the evolution of radiating fluid spheres in general relativity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Herrera, L.; Jimenez, J.; Esculpi, M.

1989-10-01

A method used to study the evolution of radiating spheres (Herrera, Jimenez, and Ruggeri) is extended to the case in which surface phenomena are taken into account. The equations have been integrated numerically for a model derived from the Schwarzschild interior solution, bringing out the effects of surface tension on the evolution of the spheres. 17 refs.

Lateral gene transfer in a heavy metal-contaminated-groundwater microbial community

DOE PAGES

Hemme, Christopher L.; Green, Stefan J.; Rishishwar, Lavanya; ...

2016-04-05

Here, unraveling the drivers controlling the response and adaptation of biological communities to environmental change, especially anthropogenic activities, is a central but poorly understood issue in ecology and evolution. Comparative genomics studies suggest that lateral gene transfer (LGT) is a major force driving microbial genome evolution, but its role in the evolution of microbial communities remains elusive.

Exploring Relations among Preservice Elementary Teachers' Ideas about Evolution, Understanding of Relevant Science Concepts, and College Science Coursework

ERIC Educational Resources Information Center

Rice, Diana C.; Kaya, Sibel

2012-01-01

This study investigated the relations among preservice elementary teachers' ideas about evolution, their understanding of basic science concepts and college science coursework. Forty-two percent of 240 participants did not accept the theory of human evolution, but held inconsistent ideas about related topics, such as co-existence of humans and…

The Role of Metaphor in Darwin and the Implications for Teaching Evolution

ERIC Educational Resources Information Center

Pramling, Niklas

2009-01-01

This article is about the role of metaphor in scientific knowledge formation and reasoning. These issues are studied by means of an example of the theory of evolution through natural selection. The premise is that the theory of evolution contains a set of problems regarding metaphor. A second premise is that these problems have to be handled in…

Deciphering MERS-CoV Evolution in Dromedary Camels.

PubMed

Du, Lin; Han, Guan-Zhu

2016-02-01

The emergence of the Middle East respiratory syndrome coronavirus (MERS-CoV) poses a potential threat to global public health. Many aspects of the evolution and transmission of MERS-CoV in its animal reservoir remain unclear. A recent study provides new insights into the evolution and transmission of MERS-CoV in dromedary camels. Copyright © 2015 Elsevier Ltd. All rights reserved.

Human Origins: Problems in the Interpretation of New Evidence. Third Edition. AAAS Study Guides on Contemporary Problems.

ERIC Educational Resources Information Center

Almquist, Alan J.; Cronin, John E.

This Chautauqua-type short course in human evolution is divided into two parts: The Biochemical Evidence for Human Evolution, and the Fossil Evidence for Human Evolution. The first part covers the comparison of macromolecular differences between species. This includes comparison of DNA base-ratios and amino acid substitution in enzymes and other…

Evolution in the Caribbean Classroom: A Critical Analysis of the Role of Biology Teachers and Science Standards in Shaping Evolution Instruction in Belize

ERIC Educational Resources Information Center

Nunez, Elvis Enrique; Pringle, Rose M.; Showalter, Kevin Tyler

2012-01-01

A survey of the literature on evolution instruction provides evidence that teachers' personal views and understandings can shape instructional approaches and content delivered in science classrooms regardless of established science standards. This study is the first to quantify evolutionary worldviews of in-service teachers in the Caribbean,…

Transforming Misconceptions: Using Transformative Experience to Promote Positive Affect and Conceptual Change in Students Learning about Biological Evolution

ERIC Educational Resources Information Center

Heddy, Benjamin C.; Sinatra, Gale M.

2013-01-01

Teaching and learning about complex scientific content, such as biological evolution, is challenging in part because students have a difficult time seeing the relevance of evolution in their everyday lives. The purpose of this study was to explore the effectiveness of the Teaching for Transformative Experiences in Science (TTES) model (Pugh, 2002)…

Active Cocatalysts for Photocatalytic Hydrogen Evolution Derived from Nickel or Cobalt Amine Complexes.

PubMed

Huang, Yi; Zhang, Bin

2017-11-20

A cost-effective and robust strategy for the anchoring of molecular hydrogen evolution cocatalysts onto semiconductors has recently been reported. The composite materials were highly efficient and stable towards photocatalytic H 2 evolution. This study provides guidance for the design and construction of highly active heterogeneous photocatalysts. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Successive gain of insulator proteins in arthropod evolution.

PubMed

Heger, Peter; George, Rebecca; Wiehe, Thomas

2013-10-01

Alteration of regulatory DNA elements or their binding proteins may have drastic consequences for morphological evolution. Chromatin insulators are one example of such proteins and play a fundamental role in organizing gene expression. While a single insulator protein, CTCF (CCCTC-binding factor), is known in vertebrates, Drosophila melanogaster utilizes six additional factors. We studied the evolution of these proteins and show here that-in contrast to the bilaterian-wide distribution of CTCF-all other D. melanogaster insulators are restricted to arthropods. The full set is present exclusively in the genus Drosophila whereas only two insulators, Su(Hw) and CTCF, existed at the base of the arthropod clade and all additional factors have been acquired successively at later stages. Secondary loss of factors in some lineages further led to the presence of different insulator subsets in arthropods. Thus, the evolution of insulator proteins within arthropods is an ongoing and dynamic process that reshapes and supplements the ancient CTCF-based system common to bilaterians. Expansion of insulator systems may therefore be a general strategy to increase an organism's gene regulatory repertoire and its potential for morphological plasticity. © 2013 The Authors. Evolution published by Wiley Periodicals, Inc. on behalf of The Society for the Study of Evolution.

Expanding the eco-evolutionary context of herbicide resistance research.

PubMed

Neve, Paul; Busi, Roberto; Renton, Michael; Vila-Aiub, Martin M

2014-09-01

The potential for human-driven evolution in economically and environmentally important organisms in medicine, agriculture and conservation management is now widely recognised. The evolution of herbicide resistance in weeds is a classic example of rapid adaptation in the face of human-mediated selection. Management strategies that aim to slow or prevent the evolution of herbicide resistance must be informed by an understanding of the ecological and evolutionary factors that drive selection in weed populations. Here, we argue for a greater focus on the ultimate causes of selection for resistance in herbicide resistance studies. The emerging fields of eco-evolutionary dynamics and applied evolutionary biology offer a means to achieve this goal and to consider herbicide resistance in a broader and sometimes novel context. Four relevant research questions are presented, which examine (i) the impact of herbicide dose on selection for resistance, (ii) plant fitness in herbicide resistance studies, (iii) the efficacy of herbicide rotations and mixtures and (iv) the impacts of gene flow on resistance evolution and spread. In all cases, fundamental ecology and evolution have the potential to offer new insights into herbicide resistance evolution and management. © 2014 Society of Chemical Industry.

Tempo and Mode of the Evolution of Venom and Poison in Tetrapods.

PubMed

Harris, Richard J; Arbuckle, Kevin

2016-06-23

Toxic weaponry in the form of venom and poison has evolved in most groups of animals, including all four major lineages of tetrapods. Moreover, the evolution of such traits has been linked to several key aspects of the biology of toxic animals including life-history and diversification. Despite this, attempts to investigate the macroevolutionary patterns underlying such weaponry are lacking. In this study we analyse patterns of venom and poison evolution across reptiles, amphibians, mammals, and birds using a suite of phylogenetic comparative methods. We find that each major lineage has a characteristic pattern of trait evolution, but mammals and reptiles evolve under a surprisingly similar regime, whilst that of amphibians appears to be particularly distinct and highly contrasting compared to other groups. Our results also suggest that the mechanism of toxin acquisition may be an important distinction in such evolutionary patterns; the evolution of biosynthesis is far less dynamic than that of sequestration of toxins from the diet. Finally, contrary to the situation in amphibians, other tetrapod groups show an association between the evolution of toxic weaponry and higher diversification rates. Taken together, our study provides the first broad-scale analysis of macroevolutionary patterns of venom and poison throughout tetrapods.

Tempo and Mode of the Evolution of Venom and Poison in Tetrapods

PubMed Central

Harris, Richard J.; Arbuckle, Kevin

2016-01-01

Toxic weaponry in the form of venom and poison has evolved in most groups of animals, including all four major lineages of tetrapods. Moreover, the evolution of such traits has been linked to several key aspects of the biology of toxic animals including life-history and diversification. Despite this, attempts to investigate the macroevolutionary patterns underlying such weaponry are lacking. In this study we analyse patterns of venom and poison evolution across reptiles, amphibians, mammals, and birds using a suite of phylogenetic comparative methods. We find that each major lineage has a characteristic pattern of trait evolution, but mammals and reptiles evolve under a surprisingly similar regime, whilst that of amphibians appears to be particularly distinct and highly contrasting compared to other groups. Our results also suggest that the mechanism of toxin acquisition may be an important distinction in such evolutionary patterns; the evolution of biosynthesis is far less dynamic than that of sequestration of toxins from the diet. Finally, contrary to the situation in amphibians, other tetrapod groups show an association between the evolution of toxic weaponry and higher diversification rates. Taken together, our study provides the first broad-scale analysis of macroevolutionary patterns of venom and poison throughout tetrapods. PMID:27348001

Testing of some assumptions about biodegradability in soil as measured by carbon dioxide evolution

DOE Office of Scientific and Technical Information (OSTI.GOV)

El-Din Sharabi, N.; Bartha, R.

1993-04-01

The Toxic Substance Control Act calls for a premanufacturing review of novel chemical substances including their biodegradability. Carbon dioxide evolution, using non-labeled carbon or [sup 14]C, is a common method of testing. This study examines assumptions of carbon dioxide evolution testing. Test substances used included: glucose, adipic acid, benzoic acid, and n-hexadecane. Chemical composition other than carbon content appears to influence minimally the percentages conversion to CO[sub 2]. However, that although CO[sub 2] evolution seemed proportional to the carbon content and concentration of the test substance, at least one-half of the evolved net CO[sub 2] did not come directly frommore » the test substance. Conversion to CO[sub 2] in the soil appeared to depend on carbon content only. In experiments of 1 month or longer, the net CO[sub 2] evolution in response to substrate may be above 100% of the added substrate carbon. Whether this applies to all substrate additions remains to be studied. The authors conclude that net CO[sub 2] and [sup 14]CO[sub 2] evolution measurements are useful as a first-tier tests for assessing biodegradability in soil. 11 refs., 6 figs.« less

The Effects of Stellar Dynamics on the Evolution of Young, Dense Stellar Systems

NASA Astrophysics Data System (ADS)

Belkus, H.; van Bever, J.; Vanbeveren, D.

In this paper, we report on first results of a project in Brussels in which we study the effects of stellar dynamics on the evolution of young dense stellar systems using 3 decades of expertise in massive-star evolution and our population (number and spectral) synthesis code. We highlight an unconventionally formed object scenario (UFO-scenario) for Wolf Rayet binaries and study the effects of a luminous blue variable-type instability wind mass-loss formalism on the formation of intermediate-mass black holes.

Comparative evolution of the inverse problems (Introduction to an interdisciplinary study of the inverse problems)

NASA Technical Reports Server (NTRS)

Sabatier, P. C.

1972-01-01

The progressive realization of the consequences of nonuniqueness imply an evolution of both the methods and the centers of interest in inverse problems. This evolution is schematically described together with the various mathematical methods used. A comparative description is given of inverse methods in scientific research, with examples taken from mathematics, quantum and classical physics, seismology, transport theory, radiative transfer, electromagnetic scattering, electrocardiology, etc. It is hoped that this paper will pave the way for an interdisciplinary study of inverse problems.

Shape Optimization of Rubber Bushing Using Differential Evolution Algorithm

PubMed Central

2014-01-01

The objective of this study is to design rubber bushing at desired level of stiffness characteristics in order to achieve the ride quality of the vehicle. A differential evolution algorithm based approach is developed to optimize the rubber bushing through integrating a finite element code running in batch mode to compute the objective function values for each generation. Two case studies were given to illustrate the application of proposed approach. Optimum shape parameters of 2D bushing model were determined by shape optimization using differential evolution algorithm. PMID:25276848

Laboratory insights into the chemical and kinetic evolution of several organic molecules under simulated Mars surface UV radiation conditions

NASA Astrophysics Data System (ADS)

Poch, O.; Kaci, S.; Stalport, F.; Szopa, C.; Coll, P.

2014-11-01

The search for organic carbon at the surface of Mars, as clues of past habitability or remnants of life, is a major science goal of Mars' exploration. Understanding the chemical evolution of organic molecules under current martian environmental conditions is essential to support the analyses performed in situ. What molecule can be preserved? What is the timescale of organic evolution at the surface? This paper presents the results of laboratory investigations dedicated to monitor the evolution of organic molecules when submitted to simulated Mars surface ultraviolet radiation (190-400 nm), mean temperature (218 ± 2 K) and pressure (6 ± 1 mbar) conditions. Experiments are done with the MOMIE simulation setup (for Mars Organic Molecules Irradiation and Evolution) allowing both a qualitative and quantitative characterization of the evolution the tested molecules undergo (Poch, O. et al. [2013]. Planet. Space Sci. 85, 188-197). The chemical structures of the solid products and the kinetic parameters of the photoreaction (photolysis rate, half-life and quantum efficiency of photodecomposition) are determined for glycine, urea, adenine and chrysene. Mellitic trianhydride is also studied in order to complete a previous study done with mellitic acid (Stalport, F., Coll, P., Szopa, C., Raulin, F. [2009]. Astrobiology 9, 543-549), by studying the evolution of mellitic trianhydride. The results show that solid layers of the studied molecules have half-lives of 10-103 h at the surface of Mars, when exposed directly to martian UV radiation. However, organic layers having aromatic moieties and reactive chemical groups, as adenine and mellitic acid, lead to the formation of photoresistant solid residues, probably of macromolecular nature, which could exhibit a longer photostability. Such solid organic layers are found in micrometeorites or could have been formed endogenously on Mars. Finally, the quantum efficiencies of photodecomposition at wavelengths from 200 to 250 nm, determined for each of the studied molecules, range from 10-2 to 10-6 molecule photon-1 and apply for isolated molecules exposed at the surface of Mars. These kinetic parameters provide essential inputs for numerical modeling of the evolution of Mars' current reservoir of organic molecules. Organic molecules adsorbed on martian minerals may have different kinetic parameters and lead to different endproducts. The present study paves the way for the interpretation of more complex simulation experiments where organics will be mixed with martian mineral analogs.

Rate of resistance evolution and polymorphism in long- and short-lived hosts.

PubMed

Bruns, Emily; Hood, Michael E; Antonovics, Janis

2015-02-01

Recent theoretical work has shown that long-lived hosts are expected to evolve higher equilibrium levels of disease resistance than shorter-lived hosts, but questions of how longevity affects the rate of resistance evolution and the maintenance of polymorphism remain unanswered. Conventional wisdom suggests that adaptive evolution should occur more slowly in long-lived organisms than in short-lived organisms. However, the opposite may be true for the evolution of disease-resistance traits where exposure to disease, and therefore the strength of selection for resistance increases with longevity. In a single locus model of innate resistance to a frequency-dependent, sterilizing disease, longer lived hosts evolved resistance more rapidly than short-lived hosts. Moreover, resistance in long-lived hosts could only be polymorphic for more costly and more extreme resistance levels than short-lived hosts. The increased rate of evolution occurred in spite of longer generation times because longer-lived hosts had both a longer period of exposure to disease as well as higher disease prevalence. Qualitatively similar results were found when the model was extended to mortality-inducing diseases, or to density-dependent transmission modes. Our study shows that the evolutionary dynamics of host resistance is determined by more than just levels of resistance and cost, but is highly sensitive to the life-history traits of the host. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

SWS2 visual pigment evolution as a test of historically contingent patterns of plumage color evolution in warblers.

PubMed

Bloch, Natasha I; Morrow, James M; Chang, Belinda S W; Price, Trevor D

2015-02-01

Distantly related clades that occupy similar environments may differ due to the lasting imprint of their ancestors-historical contingency. The New World warblers (Parulidae) and Old World warblers (Phylloscopidae) are ecologically similar clades that differ strikingly in plumage coloration. We studied genetic and functional evolution of the short-wavelength-sensitive visual pigments (SWS2 and SWS1) to ask if altered color perception could contribute to the plumage color differences between clades. We show SWS2 is short-wavelength shifted in birds that occupy open environments, such as finches, compared to those in closed environments, including warblers. Phylogenetic reconstructions indicate New World warblers were derived from a finch-like form that colonized from the Old World 15-20 Ma. During this process, the SWS2 gene accumulated six substitutions in branches leading to New World warblers, inviting the hypothesis that passage through a finch-like ancestor resulted in SWS2 evolution. In fact, we show spectral tuning remained similar across warblers as well as the finch ancestor. Results reject the hypothesis of historical contingency based on opsin spectral tuning, but point to evolution of other aspects of visual pigment function. Using the approach outlined here, historical contingency becomes a generally testable theory in systems where genotype and phenotype can be connected. © 2014 The Author(s). Evolution © 2014 The Society for the Study of Evolution.

Rules of co-occurring mutations characterize the antigenic evolution of human influenza A/H3N2, A/H1N1 and B viruses.

PubMed

Chen, Haifen; Zhou, Xinrui; Zheng, Jie; Kwoh, Chee-Keong

2016-12-05

The human influenza viruses undergo rapid evolution (especially in hemagglutinin (HA), a glycoprotein on the surface of the virus), which enables the virus population to constantly evade the human immune system. Therefore, the vaccine has to be updated every year to stay effective. There is a need to characterize the evolution of influenza viruses for better selection of vaccine candidates and the prediction of pandemic strains. Studies have shown that the influenza hemagglutinin evolution is driven by the simultaneous mutations at antigenic sites. Here, we analyze simultaneous or co-occurring mutations in the HA protein of human influenza A/H3N2, A/H1N1 and B viruses to predict potential mutations, characterizing the antigenic evolution. We obtain the rules of mutation co-occurrence using association rule mining after extracting HA1 sequences and detect co-mutation sites under strong selective pressure. Then we predict the potential drifts with specific mutations of the viruses based on the rules and compare the results with the "observed" mutations in different years. The sites under frequent mutations are in antigenic regions (epitopes) or receptor binding sites. Our study demonstrates the co-occurring site mutations obtained by rule mining can capture the evolution of influenza viruses, and confirms that cooperative interactions among sites of HA1 protein drive the influenza antigenic evolution.

The evolution of parental care in insects: A test of current hypotheses.

PubMed

Gilbert, James D J; Manica, Andrea

2015-05-01

Which sex should care for offspring is a fundamental question in evolution. Invertebrates, and insects in particular, show some of the most diverse kinds of parental care of all animals, but to date there has been no broad comparative study of the evolution of parental care in this group. Here, we test existing hypotheses of insect parental care evolution using a literature-compiled phylogeny of over 2000 species. To address substantial uncertainty in the insect phylogeny, we use a brute force approach based on multiple random resolutions of uncertain nodes. The main transitions were between no care (the probable ancestral state) and female care. Male care evolved exclusively from no care, supporting models where mating opportunity costs for caring males are reduced-for example, by caring for multiple broods-but rejecting the "enhanced fecundity" hypothesis that male care is favored because it allows females to avoid care costs. Biparental care largely arose by males joining caring females, and was more labile in Holometabola than in Hemimetabola. Insect care evolution most closely resembled amphibian care in general trajectory. Integrating these findings with the wealth of life history and ecological data in insects will allow testing of a rich vein of existing hypotheses. © 2015 The Author(s). Evolution published by Wiley Periodicals, Inc. on behalf of The Society for the Study of Evolution.

Directional cultural change by modification and replacement of memes.

PubMed

Cardoso, Gonçalo C; Atwell, Jonathan W

2011-01-01

Evolutionary approaches to culture remain contentious. A source of contention is that cultural mutation may be substantial and, if it drives cultural change, then current evolutionary models are not adequate. But we lack studies quantifying the contribution of mutations to directional cultural change. We estimated the contribution of one type of cultural mutations--modification of memes--to directional cultural change using an amenable study system: learned birdsongs in a species that recently entered an urban habitat. Many songbirds have higher minimum song frequency in cities, to alleviate masking by low-frequency noise. We estimated that the input of meme modifications in an urban songbird population explains about half the extent of the population divergence in song frequency. This contribution of cultural mutations is large, but insufficient to explain the entire population divergence. The remaining divergence is due to selection of memes or creation of new memes. We conclude that the input of cultural mutations can be quantitatively important, unlike in genetic evolution, and that it operates together with other mechanisms of cultural evolution. For this and other traits, in which the input of cultural mutations might be important, quantitative studies of cultural mutation are necessary to calibrate realistic models of cultural evolution. © 2010 The Author(s). Evolution© 2010 The Society for the Study of Evolution.

Phylogenetic study of recombinant strains of Potato virus Y

USDA-ARS?s Scientific Manuscript database

Potato virus Y (PVY) exists as a complex of strains, including a growing number of recombinants. Evolution of PVY proceeds through accumulation of mutations and more rapidly through recombination. Here, the role of recombination in PVY evolution and the origin of common PVY recombinants were studied...

Comparative population genomics of maize domestication and improvement

USDA-ARS?s Scientific Manuscript database

Domestication and modern breeding represent exemplary case studies of evolution in action. Maize is an outcrossing species with a complex genome, and an understanding of maize evolution is thus relevant for both plant and animal systems. This study is the largest plant resequencing effort to date, ...

Experimental test of an eco-evolutionary dynamic feedback loop between evolution and population density in the green peach aphid.

PubMed

Turcotte, Martin M; Reznick, David N; Daniel Hare, J

2013-05-01

An eco-evolutionary feedback loop is defined as the reciprocal impacts of ecology on evolutionary dynamics and evolution on ecological dynamics on contemporary timescales. We experimentally tested for an eco-evolutionary feedback loop in the green peach aphid, Myzus persicae, by manipulating initial densities and evolution. We found strong evidence that initial aphid density alters the rate and direction of evolution, as measured by changes in genotype frequencies through time. We also found that evolution of aphids within only 16 days, or approximately three generations, alters the rate of population growth and predicts density compared to nonevolving controls. The impact of evolution on population dynamics also depended on density. In one evolution treatment, evolution accelerated population growth by up to 10.3% at high initial density or reduced it by up to 6.4% at low initial density. The impact of evolution on population growth was as strong as or stronger than that caused by a threefold change in intraspecific density. We found that, taken together, ecological condition, here intraspecific density, alters evolutionary dynamics, which in turn alter concurrent population growth rate (ecological dynamics) in an eco-evolutionary feedback loop. Our results suggest that ignoring evolution in studies predicting population dynamics might lead us to over- or underestimate population density and that we cannot predict the evolutionary outcome within aphid populations without considering population size.

Conservative and compensatory evolution in oxidative phosphorylation complexes of angiosperms with highly divergent rates of mitochondrial genome evolution.

PubMed

Havird, Justin C; Whitehill, Nicholas S; Snow, Christopher D; Sloan, Daniel B

2015-12-01

Interactions between nuclear and mitochondrial gene products are critical for eukaryotic cell function. Nuclear genes encoding mitochondrial-targeted proteins (N-mt genes) experience elevated rates of evolution, which has often been interpreted as evidence of nuclear compensation in response to elevated mitochondrial mutation rates. However, N-mt genes may be under relaxed functional constraints, which could also explain observed increases in their evolutionary rate. To disentangle these hypotheses, we examined patterns of sequence and structural evolution in nuclear- and mitochondrial-encoded oxidative phosphorylation proteins from species in the angiosperm genus Silene with vastly different mitochondrial mutation rates. We found correlated increases in N-mt gene evolution in species with fast-evolving mitochondrial DNA. Structural modeling revealed an overrepresentation of N-mt substitutions at positions that directly contact mutated residues in mitochondrial-encoded proteins, despite overall patterns of conservative structural evolution. These findings support the hypothesis that selection for compensatory changes in response to mitochondrial mutations contributes to the elevated rate of evolution in N-mt genes. We discuss these results in light of theories implicating mitochondrial mutation rates and mitonuclear coevolution as drivers of speciation and suggest comparative and experimental approaches that could take advantage of heterogeneity in rates of mtDNA evolution across eukaryotes to evaluate such theories. © 2015 The Author(s). Evolution © 2015 The Society for the Study of Evolution.

Evolution and Personal Religious Belief: Christian University Biology-Related Majors' Search for Reconciliation

ERIC Educational Resources Information Center

Winslow, Mark W.; Staver, John R.; Scharmann, Lawrence C.

2011-01-01

The goal of this study was to explore Christian biology-related majors' perceptions of conflicts between evolution and their religious beliefs. This naturalistic study utilized a case study design of 15 undergraduate biology-related majors at or recent biology-related graduates from a mid-western Christian university. The broad sources of data…

The molecular origin and evolution of dim-light vision in mammals.

PubMed

Bickelmann, Constanze; Morrow, James M; Du, Jing; Schott, Ryan K; van Hazel, Ilke; Lim, Steve; Müller, Johannes; Chang, Belinda S W

2015-11-01

The nocturnal origin of mammals is a longstanding hypothesis that is considered instrumental for the evolution of endothermy, a potential key innovation in this successful clade. This hypothesis is primarily based on indirect anatomical inference from fossils. Here, we reconstruct the evolutionary history of rhodopsin--the vertebrate visual pigment mediating the first step in phototransduction at low-light levels--via codon-based model tests for selection, combined with gene resurrection methods that allow for the study of ancient proteins. Rhodopsin coding sequences were reconstructed for three key nodes: Amniota, Mammalia, and Theria. When expressed in vitro, all sequences generated stable visual pigments with λMAX values similar to the well-studied bovine rhodopsin. Retinal release rates of mammalian and therian ancestral rhodopsins, measured via fluorescence spectroscopy, were significantly slower than those of the amniote ancestor, indicating altered molecular function possibly related to nocturnality. Positive selection along the therian branch suggests adaptive evolution in rhodopsin concurrent with therian ecological diversification events during the Mesozoic that allowed for an exploration of the environment at varying light levels. © 2015 The Author(s). Evolution © 2015 The Society for the Study of Evolution.

Effect of micro-oxygenation and wood type on the phenolic composition and color of an aged red wine.

PubMed

Sánchez-Iglesias, Montserrat; González-Sanjosé, Ma Luisa; Pérez-Magariño, Silvia; Ortega-Heras, Miriam; González-Huerta, Carlos

2009-12-23

Many studies have recently been published focused on the effects of micro-oxygenation on the quality of wines, its application modes, and doses, etc. However, there are still few scientific papers on how previously micro-oxygenated wines perform during storage or barrel aging. This study focused on the evolution of the phenolic composition, especially of anthocyanins, and color, together with astringency and tannins, during micro-oxygenation before barrel aging. In addition, to evaluate whether wine evolution during aging depends on barrel type, wines were aged in four different oak barrel types. Tempranillo wines, some micro-oxygenated before malolactic fermentation and others not, were aged for 12 months in American, French, Central European, and Spanish oak, following wine evolution during that period. The study was carried out for two consecutive vintages. Results showed that all wines evolved similarly; therefore, the micro-oxygenation treatment neither accelerated nor delayed the typical changes of aging. Slightly different evolutions were detected according to the barrel wood type, whether or not the wine was micro-oxygenated. The varied evolutions must therefore be associated with the differences from each oak type (structure, grain and density, composition, etc.).

Tightly congruent bursts of lineage and phenotypic diversification identified in a continental ant radiation.

PubMed

Price, Shauna L; Etienne, Rampal S; Powell, Scott

2016-04-01

Adaptive diversification is thought to be shaped by ecological opportunity. A prediction of this ecological process of diversification is that it should result in congruent bursts of lineage and phenotypic diversification, but few studies have found this expected association. Here, we study the relationship between rates of lineage diversification and body size evolution in the turtle ants, a diverse Neotropical clade. Using a near complete, time-calibrated phylogeny we investigated lineage diversification dynamics and body size disparity through model fitting analyses and estimation of per-lineage rates of cladogenesis and phenotypic evolution. We identify an exceptionally high degree of congruence between the high rates of lineage and body size diversification in a young clade undergoing renewed diversification in the ecologically distinct Chacoan biogeographical region of South America. It is likely that the region presented turtle ants with novel ecological opportunity, which facilitated a nested burst of diversification and phenotypic evolution within the group. Our results provide a compelling quantitative example of tight congruence between rates of lineage and phenotypic diversification, meeting the key predicted pattern of adaptive diversification shaped by ecological opportunity. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

Experimental evolution of female traits under different levels of intersexual conflict in Drosophila melanogaster.

PubMed

Nandy, B; Gupta, V; Udaykumar, N; Samant, M A; Sen, S; Prasad, N G

2014-02-01

A number of studies have documented the evolution of female resistance to mate-harm in response to the alteration of intersexual conflict in the populations. However, the life-history consequence of such evolution is still a subject of debate. In this study, we subjected replicate populations of Drosophila melanogaster to different levels of sexual conflict (generated by altering the operational sex ratio) for over 45 generations. Our results suggest that females from populations experiencing higher level of intersexual conflict evolved increased resistance to mate-harm, in terms of both longevity and progeny production. Females from the populations with low conflict were significantly heavier at eclosion and were more susceptible to mate-harm in terms of progeny production under continuous exposure to the males. However, these females produced more progeny upon single mating and had significantly higher longevity in absence of any male exposure-a potential evidence of trade-offs between resistance-related traits and other life-history traits, such as fecundity and longevity. We also report tentative evidence, suggesting an increased male cost of interacting with more resistant females. © 2013 The Author(s). Evolution © 2013 The Society for the Study of Evolution.

Is a larger refuge always better? Dispersal and dose in pesticide resistance evolution.

PubMed

Takahashi, Daisuke; Yamanaka, Takehiko; Sudo, Masaaki; Andow, David A

2017-06-01

The evolution of resistance against pesticides is an important problem of modern agriculture. The high-dose/refuge strategy, which divides the landscape into treated and nontreated (refuge) patches, has proven effective at delaying resistance evolution. However, theoretical understanding is still incomplete, especially for combinations of limited dispersal and partially recessive resistance. We reformulate a two-patch model based on the Comins model and derive a simple quadratic approximation to analyze the effects of limited dispersal, refuge size, and dominance for high efficacy treatments on the rate of evolution. When a small but substantial number of heterozygotes can survive in the treated patch, a larger refuge always reduces the rate of resistance evolution. However, when dominance is small enough, the evolutionary dynamics in the refuge population, which is indirectly driven by migrants from the treated patch, mainly describes the resistance evolution in the landscape. In this case, for small refuges, increasing the refuge size will increase the rate of resistance evolution. Our analysis distils major driving forces from the model, and can provide a framework for understanding directional selection in source-sink environments. © 2017 The Author(s). Evolution published by Wiley Periodicals, Inc. on behalf of The Society for the Study of Evolution.

Slowly switching between environments facilitates reverse evolution in small populations.

PubMed

Tan, Longzhi; Gore, Jeff

2012-10-01

Natural populations must constantly adapt to ever-changing environmental conditions. A particularly interesting question is whether such adaptations can be reversed by returning the population to an ancestral environment. Such evolutionary reversals have been observed in both natural and laboratory populations. However, the factors that determine the reversibility of evolution are still under debate. The time scales of environmental change vary over a wide range, but little is known about how the rate of environmental change influences the reversibility of evolution. Here, we demonstrate computationally that slowly switching between environments increases the reversibility of evolution for small populations that are subject to only modest clonal interference. For small populations, slow switching reduces the mean number of mutations acquired in a new environment and also increases the probability of reverse evolution at each of these "genetic distances." As the population size increases, slow switching no longer reduces the genetic distance, thus decreasing the evolutionary reversibility. We confirm this effect using both a phenomenological model of clonal interference and also a Wright-Fisher stochastic simulation that incorporates genetic diversity. Our results suggest that the rate of environmental change is a key determinant of the reversibility of evolution, and provides testable hypotheses for experimental evolution. © 2012 The Author(s). Evolution© 2012 The Society for the Study of Evolution.

Alternate pathways of body shape evolution translate into common patterns of locomotor evolution in two clades of lizards.

PubMed

Bergmann, Philip J; Irschick, Duncan J

2010-06-01

Body shape has a fundamental impact on organismal function, but it is unknown how functional morphology and locomotor performance and kinematics relate across a diverse array of body shapes. We showed that although patterns of body shape evolution differed considerably between lizards of the Phrynosomatinae and Lerista, patterns of locomotor evolution coincided between clades. Specifically, we found that the phrynosomatines evolved a stocky phenotype through body widening and limb shortening, whereas Lerista evolved elongation through body lengthening and limb shortening. In both clades, relative limb length played a key role in locomotor evolution and kinematic strategies, with long-limbed species moving faster and taking longer strides. In Lerista, the body axis also influenced locomotor evolution. Similar patterns of locomotor evolution were likely due to constraints on how the body can move. However, these common patterns of locomotor evolution between the two clades resulted in different kinematic strategies and levels of performance among species because of their morphological differences. Furthermore, we found no evidence that distinct body shapes are adaptations to different substrates, as locomotor kinematics did not change on loose or solid substrates. Our findings illustrate the importance of studying kinematics to understand the mechanisms of locomotor evolution and phenotype-function relationships.

Bridging Inter- and Intraspecific Trait Evolution with a Hierarchical Bayesian Approach.

PubMed

Kostikova, Anna; Silvestro, Daniele; Pearman, Peter B; Salamin, Nicolas

2016-05-01

The evolution of organisms is crucially dependent on the evolution of intraspecific variation. Its interactions with selective agents in the biotic and abiotic environments underlie many processes, such as intraspecific competition, resource partitioning and, eventually, species formation. Nevertheless, comparative models of trait evolution neither allow explicit testing of hypotheses related to the evolution of intraspecific variation nor do they simultaneously estimate rates of trait evolution by accounting for both trait mean and variance. Here, we present a model of phenotypic trait evolution using a hierarchical Bayesian approach that simultaneously incorporates interspecific and intraspecific variation. We assume that species-specific trait means evolve under a simple Brownian motion process, whereas species-specific trait variances are modeled with Brownian or Ornstein-Uhlenbeck processes. After evaluating the power of the method through simulations, we examine whether life-history traits impact evolution of intraspecific variation in the Eriogonoideae (buckwheat family, Polygonaceae). Our model is readily extendible to more complex scenarios of the evolution of inter- and intraspecific variation and presents a step toward more comprehensive comparative models for macroevolutionary studies. © The Author(s) 2016. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Traditional Chinese medicine and the positive correlation with homeostatic evolution of human being: based on medical perspective.

PubMed

Wang, Jie-Hua

2012-08-01

Adaptation is an eternal theme of biological evolution. The paper aims at exploring the conception of positive correlation between traditional Chinese medicine (TCM) and human homeostatic evolution based on medical perspective. Discussions mainly involve TCM conforming to natural laws and natural evolution of life, spontaneous harmonization of yin and yang and operating system of human self-healing, modern human immunology and human endogenous immune function in TCM, self-homeostasis of human micro-ecological state and balance mechanism on regulating base in TCM, as well as adaptation-eternal theme of biological evolution and safeguarding adaptability-value of TCM. In perspective of medicine, theory and practice of TCM are in positive correlation with human homeostatic evolution, and what TCM tries to maintain is human intrinsic adaptive capability to disease and nature. Therefore, it is the core value of TCM, which is to be further studied, explored, realized and known to the world.

The isotopic and chemical evolution of planets: Mars as a missing link

NASA Technical Reports Server (NTRS)

Depaolo, D. J.

1988-01-01

The study of planetary bodies has advanced to a stage where it is possible to contemplate general models for the chemical and physical evolution of planetary interiors, which might be referred to as UMPES (Unified Models of Planetary Evolution and Structure). UMPES would be able to predict the internal evolution and structure of a planet given certain input parameters such as mass, distance from the sun, and a time scale for accretion. Such models are highly dependent on natural observations because the basic material properties of planetary interiors, and the processes that take place during the evolution of planets are imperfectly understood. The idea of UMPES was particularly unrealistic when the only information available was from the earth. However, advances have been made in the understanding of the general aspects of planetary evolution now that there is geochemical and petrological data available for the moon and for meteorites.

Lunar initial Nd-143/Nd-144 - Differential evolution of the lunar crust and mantle

NASA Technical Reports Server (NTRS)

Lugmair, G. W.; Marti, K.

1978-01-01

The Sm-Nd evolution of Apollo 15 green glass is discussed. The ICE age (intercept with chondritic evolution) of 3.8 + or - 0.4 eons overlaps the range of reported (Ar-39)-(Ar-40) ages and implies a distinct source region for green glass, characterized by very low and unfractionated REE abundances. Evidence is presented that LINd (lunar initial Nd) is compatible with a 'chondritic'-type Nd isotopic evolution as observed in the Juvinas meteorite. This normalization is used to study the Sm-Nd system of various lunar rock types. The results obtained from a limited number of rocks clearly indicate differential Sm-Nd evolution for the lunar crust and mantle. High-Ti basalts returned by the Apollo 11 and 17 missions were derived from distinct source regions. The Nd-143 evolution in KREEP requires a source region which is clearly distinct from any mantle reservoir.

Clinical management of resistance evolution in a bacterial infection: A case study.

PubMed

Woods, Robert J; Read, Andrew F

2015-10-10

We report the case of a patient with a chronic bacterial infection that could not be cured. Drug treatment became progressively less effective due to antibiotic resistance, and the patient died, in effect from overwhelming evolution. Even though the evolution of drug resistance was recognized as a major threat, and the fundamentals of drug resistance evolution are well understood, it was impossible to make evidence-based decisions about the evolutionary risks associated with the various treatment options. We present this case to illustrate the urgent need for translational research in the evolutionary medicine of antibiotic resistance. © The Author(s) 2015. Published by Oxford University Press on behalf of the Foundation for Evolution, Medicine, and Public Health.

The evolution of complex life.

PubMed

Billingham, J

1989-01-01

In considering the probabilities that intelligent life might exist elsewhere in the Universe, it is important to ask questions about the factors governing the emergence of complex living organisms in the context of evolutionary biology, planetary environments and events in space. Two important problems arise. First, what can be learned about the general laws governing the evolution of complex life anywhere in space by studying its history on the Earth? Second, how is the evolution of complex life affected by events in space? To address these problems, a series of Science Workshops on the Evolution of Complex Life was held at the Ames Research Center. Included in this paper are highlights of those workshops, with particular emphasis on the first question, namely the evolution of complex extraterrestrial life.

Molecular evolution and the latitudinal biodiversity gradient.

PubMed

Dowle, E J; Morgan-Richards, M; Trewick, S A

2013-06-01

Species density is higher in the tropics (low latitude) than in temperate regions (high latitude) resulting in a latitudinal biodiversity gradient (LBG). The LBG must be generated by differential rates of speciation and/or extinction and/or immigration among regions, but the role of each of these processes is still unclear. Recent studies examining differences in rates of molecular evolution have inferred a direct link between rate of molecular evolution and rate of speciation, and postulated these as important drivers of the LBG. Here we review the molecular genetic evidence and examine the factors that might be responsible for differences in rates of molecular evolution. Critical to this is the directionality of the relationship between speciation rates and rates of molecular evolution.

Exploring stellar evolution with gravitational-wave observations

NASA Astrophysics Data System (ADS)

Dvorkin, Irina; Uzan, Jean-Philippe; Vangioni, Elisabeth; Silk, Joseph

2018-05-01

Recent detections of gravitational waves from merging binary black holes opened new possibilities to study the evolution of massive stars and black hole formation. In particular, stellar evolution models may be constrained on the basis of the differences in the predicted distribution of black hole masses and redshifts. In this work we propose a framework that combines galaxy and stellar evolution models and use it to predict the detection rates of merging binary black holes for various stellar evolution models. We discuss the prospects of constraining the shape of the time delay distribution of merging binaries using just the observed distribution of chirp masses. Finally, we consider a generic model of primordial black hole formation and discuss the possibility of distinguishing it from stellar-origin black holes.

Community evolution mining and analysis in social network

NASA Astrophysics Data System (ADS)

Liu, Hongtao; Tian, Yuan; Liu, Xueyan; Jian, Jie

2017-03-01

With the development of digital and network technology, various social platforms emerge. These social platforms have greatly facilitated access to information, attracting more and more users. They use these social platforms every day to work, study and communicate, so every moment social platforms are generating massive amounts of data. These data can often be modeled as complex networks, making large-scale social network analysis possible. In this paper, the existing evolution classification model of community has been improved based on community evolution relationship over time in dynamic social network, and the Evolution-Tree structure is proposed which can show the whole life cycle of the community more clearly. The comparative test result shows that the improved model can excavate the evolution relationship of the community well.

Kinetoplastid phylogenetics, with special reference to the evolution of parasitic trypanosomes.

PubMed

Stevens, J R

2008-09-01

To fully understand the evolutionary history of parasitic kinetoplastids and to understand the context within which the evolution of each parasite group has developed, an understanding not just of the parasites, but of all kinetoplastids is required. Accordingly, this paper provides an overview of kinetoplastid evolution and systematics, including coverage of the proposal by Moreira et al. (2004) to divide kinetoplasts into Prokinetoplastina (Ichthyobodo and Perkinsiella) and Metakinetoplastina (other bodonids and trypanosomatids). The implications of such a revision, with regard to correctly identifying outgroup taxa for studies of evolution within taxa of medical importance, are addressed, together with a more detailed review of the evolution and origins of the trypanosomes in the light of new phylogenies, new approaches and revisions in kinetoplastid systematics.

Do State Science Standards Matter?: Comparing Student Perceptions of the Coverage of Evolution in Indiana & Ohio Public High Schools

ERIC Educational Resources Information Center

Bandoli, James H.

2008-01-01

In 2000, Lerner published a study sponsored by the Fordham Foundation comparing state standards regarding the teaching of evolution. He reviewed standards from 49 states and the District of Columbia, and graded the standards based on their treatment of evolution. Indiana and nine other states received a grade of A ("very good or…

Process and metaphors in the evolutionary paradigm

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ho, M.; Fox, S

1988-01-01

Presents thinking on the processes and interpretation of biological evolution, emphasizing the study of biological processes as they occur in living organisms and their communities, rather than through mechanical or statistical models. Contributors explore processes and metaphors in evolution, the origin of the genetic code, new genetic mechanisms and their implications for the formation of new species, panbiogeography, the active role of behavior in evolution, sociobiology, and more.

The 25 kW power module evolution study. Part 3: Conceptual designs for power module evolution. Volume 1: Power module evolution

NASA Technical Reports Server (NTRS)

1979-01-01

Candidate power module confugurations which will directly support an evolutionary scenario allowing growth from 25 kW to 100 kW are described. The growth rationale is structured to support a nominal scenario for sortie mission support to the POrbiter and to free-flying payloads during the 1983 to 1990 era.

Theories of Evolution, Science (Experimental): 5315.42.

ERIC Educational Resources Information Center

Adams, Joseph P.

This is an in-depth course of study of the historical attempts to explain the evolutionary process and of recent developments pertinent to the study of biomedical evolution. Topics included in the module are: (1) ancient concepts of the evolutionary process; (2) various aspects of Lamarckism, Darwinism and neo-Darwinism, including substantiating…

KINETIC STUDIES RELATED TO THE LIMB (LIMESTONE INJECTION MULTISTAGE BURNER) BURNER

EPA Science Inventory

The report gives results of theoretical and experimental studies of subjects related to the limestone injection multistage burner (LIMB). The main findings include data on the rate of evolution of H2S from different coals and on the dependence of the rate of evolution on the dist...

Evolution of Medication Administration Workflow in Implementing Electronic Health Record System

ERIC Educational Resources Information Center

Huang, Yuan-Han

2013-01-01

This study focused on the clinical workflow evolutions when implementing the health information technology (HIT). The study especially emphasized on administrating medication when the electronic health record (EHR) systems were adopted at rural healthcare facilities. Mixed-mode research methods, such as survey, observation, and focus group, were…

Evolution of Observation: Implementing Programmatic Change

ERIC Educational Resources Information Center

Bender-Slack, Delane A.; Young, Teresa

2013-01-01

In the study reported, we examine the evolution of preservice teacher observation, focusing on the essential nature of observation to preservice teachers' learning about teaching while in the field. The study was 3 years long, and it involved 79 preservice teachers during semester-long language arts methods courses in early childhood and…

Secondary School Students' Reasoning about Evolution

ERIC Educational Resources Information Center

To, Cheryl; Tenenbaum, Harriet R.; Hogh, Henriette

2017-01-01

This study examined age differences in young people's understanding of evolution theory in secondary school. A second aim of this study was to propose a new coding scheme that more accurately described students' conceptual understanding about evolutionary theory. We argue that coding schemes adopted in previous research may have overestimated…

The Distance Education Evolution: Issues and Case Studies

ERIC Educational Resources Information Center

Monolescu, Dominique; Schifter, Catherine; Greenwood, Linda

2004-01-01

"The Distance Education Evolution: Case Studies" addresses issues regarding the development and design of online courses, and the implementation and evaluation of an online learning program. Several chapters include design strategies for online courses that range from the specific to the universal. Many authors address pedagogical issues from both…