The anomalous U(1)_{anom} symmetry and flavors from an SU(5) × SU(5)' GUT in Z_{12-I} orbifold compactification

NASA Astrophysics Data System (ADS)

Kim, Jihn E.; Kyae, Bumseok; Nam, Soonkeon

2017-12-01

In string compactifications, frequently the anomalous U(1) gauge symmetry appears which belongs to E_8 × E_8' of the heterotic string. This anomalous U(1) gauge boson obtains mass at the compactification scale (≈ 10^{18 } {GeV}) by absorbing one pseudoscalar (corresponding to the model-independent axion) from the second rank antisymmetric tensor field B_{MN}. Below the compactification scale a global symmetry U(1)_{anom} results whose charge Q_anom is the original gauge U(1) charge. This is the most natural global symmetry, realizing the "invisible" axion. This global symmetry U(1)_{anom} is suitable for a flavor symmetry. In the simplest compactification model with the flipped SU(5) grand unification, all the low energy parameters are calculated in terms of the vacuum expectation values of the standard model singlets.

Adventures in heterotic string phenomenology

NASA Astrophysics Data System (ADS)

Dundee, George Benjamin

In this Dissertation, we consider three topics in the study of effective field theories derived from orbifold compactifications of the heterotic string. In Chapter 2 we provide a primer for those interested in building models based on orbifold compactifications of the heterotic string. In Chapter 3, we analyze gauge coupling unification in the context of heterotic strings on anisotropic orbifolds. This construction is very much analogous to effective five dimensional orbifold GUT field theories. Our analysis assumes three fundamental scales, the string scale, M S, a compactification scale, MC, and a mass scale for some of the vector-like exotics, MEX; the other exotics are assumed to get mass at MS. In the particular models analyzed, we show that gauge coupling unification is not possible with MEX = M C and in fact we require MEX << MC ˜ 3 x 1016 GeV. We find that about 10% of the parameter space has a proton lifetime (from dimension six gauge exchange) 1033 yr ≲ tau(p → pi0e+) ≲ 1036 yr, which is potentially observable by the next generation of proton decay experiments. 80% of the parameter space gives proton lifetimes below Super-K bounds. In Chapter 4, we examine the relationship between the string coupling constant, gSTRING, and the grand unified gauge coupling constant, alphaGUT, in the models of Chapter 3. We find that the requirement that the theory be perturbative provides a non-trivial constraint on these models. Interestingly, there is a correlation between the proton decay rate (due to dimension six operators) and the string coupling constant in this class of models. Finally, we make some comments concerning the extension of these models to the six (and higher) dimensional case. In Chapter 5, we discuss the issues of supersymmetry breaking and moduli stabilization within the context of E8 ⊗ E8 heterotic orbifold constructions and, in particular, we focus on the class of "mini-landscape" models. These theories contain a non-Abelian hidden gauge sector which generates a non-perturbative superpotential leading to supersymmetry breaking and moduli stabilization. We demonstrate this effect in a simple model which contains many of the features of the more general construction. In addition, we argue that once supersymmetry is broken in a restricted sector of the theory, then all moduli are stabilized by supergravity effects. Finally, we obtain the low energy superparticle spectrum resulting from this simple model.

Warped unification, proton stability, and dark matter.

PubMed

Agashe, Kaustubh; Servant, Géraldine

2004-12-03

We show that solving the problem of baryon-number violation in nonsupersymmetric grand unified theories (GUT's) in warped higher-dimensional spacetime can lead to a stable Kaluza-Klein particle. This exotic particle has gauge quantum numbers of a right-handed neutrino, but carries fractional baryon number and is related to the top quark within the higher-dimensional GUT. A combination of baryon number and SU(3) color ensures its stability. Its relic density can easily be of the right value for masses in the 10 GeV-few TeV range. An exciting aspect of these models is that the entire parameter space will be tested at near future dark matter direct detection experiments. Other exotic GUT partners of the top quark are also light and can be produced at high energy colliders with distinctive signatures.

Symmetries at ultrahigh energies and searches for neutrino oscillations

NASA Astrophysics Data System (ADS)

Papageorgiu, E.

1995-02-01

Motivated by the possibility that new (gauge) symmetries which are broken at the grand- (string-) unification scale give rise to texture zeros in the fermion mass matrices which are at the origin of the hierarchy of masses and mixings we explore the effect of such zeros on the neutrino spectrum of SUSY-GUT models. We find that the quadratic-seesaw spectrum on which most expectations are focused is neither the only nor the most interesting possibility. Cases of strong νμ- ντ or νe- ντ mixing are present for a specific texture structure of the Yukawa matrices and experimental evidence can thus throw some light on the latter. In contrast if the quadratic-seesaw scenario should be confirmed very little could be said about the symmetries of the Yukawa sector.

Enhanced axion-photon coupling in GUT with hidden photon

NASA Astrophysics Data System (ADS)

Daido, Ryuji; Takahashi, Fuminobu; Yokozaki, Norimi

2018-05-01

We show that the axion coupling to photons can be enhanced in simple models with a single Peccei-Quinn field, if the gauge coupling unification is realized by a large kinetic mixing χ = O (0.1) between hypercharge and unbroken hidden U(1)H. The key observation is that the U(1)H gauge coupling should be rather strong to induce such large kinetic mixing, leading to enhanced contributions of hidden matter fields to the electromagnetic anomaly. We find that the axion-photon coupling is enhanced by about a factor of 10-100 with respect to the GUT-axion models with E / N = 8 / 3.

An experiment to detect gut monopoles

NASA Technical Reports Server (NTRS)

Macneill, G.; Fegan, D. J.

1985-01-01

Recent advances in the development of Grand Unification Theories have led to several interesting predictions. One of these states that Grand Unification Monopoles (GUMs) exist as solutions in may nonabelian gauge theories. Another consequence of Unification is the possibility of baryon decay. The efficiency of the water tank detector in registering a Rubakov type decay will vary with both the interaction length and the GUM's velocity, expressed in terms of beta ( 0.01). The efficiency decreases at large values of because of the limited resolving time of the detector (approx. 50 ns). At lower values of Beta the time between interactions is such that the criterion of 4 events in 2 mu s can no longer be satisfied. The Rubakov experiment has now been in operation for almost 2 years with an estimated live time of 80%. During this time no candidate events have been observed leading to an estimated upper limit on the flux of 7.82 x 0.00001 m(-2) d(-1) Sr(-1). The ionization loss detection system has only recently come on line and as yet no results are available from this experiment.

Weakly-interacting massive particles in non-supersymmetric SO(10) grand unified models

DOE PAGES

Nagata, Natsumi; Olive, Keith A.; Zheng, Jiaming

2015-10-28

Here, non-supersymmetric SO(10) grand unified theories provide a framework in which the stability of dark matter is explained while gauge coupling unification is realized. In this work, we systematically study this possibility by classifying weakly interacting dark matter candidates in terms of their quantum numbers of SU(2) L Ⓧ U(1) Y, B – L, and SU(2) R. We consider both scalar and fermion candidates. We show that the requirement of a sufficiently high unification scale to ensure a proton lifetime compatible with experimental constraints plays a strong role in selecting viable candidates. Among the scalar candidates originating from either amore » 16 or 144 of SO(10), only SU(2) L singlets with zero hypercharge or doublets with Y = 1/2 satisfy all constraints for SU(4) C Ⓧ SU(2) L Ⓧ SU(2) R and SU(3) C Ⓧ SU(2) L Ⓧ SU(2) R Ⓧ U(1) B–L intermediate scale gauge groups. Among fermion triplets with zero hypercharge, only a triplet in the 45 with intermediate group SU(4) C Ⓧ SU(2) L Ⓧ SU(2) R leads to solutions with M GUT > M int and a long proton lifetime. We find three models with weak doublets and Y = 1/2 as dark matter candidates for the SU(4) C Ⓧ SU(2) L Ⓧ SU(2) R and SU(4) C Ⓧ SU(2) L Ⓧ U(1) R intermediate scale gauge groups assuming a minimal Higgs content. We also discuss how these models may be tested at accelerators and in dark matter detection experiments.« less

Likelihood analysis of the sub-GUT MSSM in light of LHC 13-TeV data

NASA Astrophysics Data System (ADS)

Costa, J. C.; Bagnaschi, E.; Sakurai, K.; Borsato, M.; Buchmueller, O.; Citron, M.; De Roeck, A.; Dolan, M. J.; Ellis, J. R.; Flächer, H.; Heinemeyer, S.; Lucio, M.; Santos, D. Martínez; Olive, K. A.; Richards, A.; Weiglein, G.

2018-02-01

We describe a likelihood analysis using MasterCode of variants of the MSSM in which the soft supersymmetry-breaking parameters are assumed to have universal values at some scale M_in below the supersymmetric grand unification scale M_GUT, as can occur in mirage mediation and other models. In addition to M_in, such `sub-GUT' models have the 4 parameters of the CMSSM, namely a common gaugino mass m_{1/2}, a common soft supersymmetry-breaking scalar mass m_0, a common trilinear mixing parameter A and the ratio of MSSM Higgs vevs tan β , assuming that the Higgs mixing parameter μ > 0. We take into account constraints on strongly- and electroweakly-interacting sparticles from ˜ 36/fb of LHC data at 13 TeV and the LUX and 2017 PICO, XENON1T and PandaX-II searches for dark matter scattering, in addition to the previous LHC and dark matter constraints as well as full sets of flavour and electroweak constraints. We find a preference for M_in˜ 10^5 to 10^9 GeV, with M_in˜ M_GUT disfavoured by Δ χ ^2 ˜ 3 due to the BR(B_{s, d} → μ ^+μ ^-) constraint. The lower limits on strongly-interacting sparticles are largely determined by LHC searches, and similar to those in the CMSSM. We find a preference for the LSP to be a Bino or Higgsino with m_{\\tilde{χ }^01} ˜ 1 TeV, with annihilation via heavy Higgs bosons H / A and stop coannihilation, or chargino coannihilation, bringing the cold dark matter density into the cosmological range. We find that spin-independent dark matter scattering is likely to be within reach of the planned LUX-Zeplin and XENONnT experiments. We probe the impact of the (g-2)_μ constraint, finding similar results whether or not it is included.

SU(5) unification with TeV-scale leptoquarks

DOE PAGES

Cox, Peter; Kusenko, Alexander; Sumensari, Olcyr; ...

2017-03-07

It has previously been noted that SU(5) unification can be achieved via the simple addition of light scalar leptoquarks from two split 10 multiplets. We explore the parameter space of this model in detail and find that unification requires at least one leptoquark to have mass below ≈ 16 TeV. We point out that introducing splitting of the 24 allows the unification scale to be raised beyond 10 16 GeV, while a U(1) PQ symmetry can be imposed to forbid dangerous proton decay mediated by the light leptoquarks. The latest bounds from LHC searches are combined and we find thatmore » a leptoquark as light as 400 GeV is still permitted. Finally, we discuss the interesting possibility that the leptoquarks required for unification could also be responsible for the 2.6σ deviation observed in the ratio R K at LHCb.« less

Unification of gauge, family, and flavor symmetries illustrated in gauged SU(12) models

DOE PAGES

Albright, Carl H.; Feger, Robert P.; Kephart, Thomas W.

2016-04-25

In this study, to explain quark and lepton masses and mixing angles, one has to extend the standard model, and the usual practice is to put the quarks and leptons into irreducible representations of discrete groups. We argue that discrete flavor symmetries (and their concomitant problems) can be avoided if we extend the gauge group. In the framework of SU(12) we give explicit examples of models having varying degrees of predictability obtained by scanning over groups and representations and identifying cases with operators contributing to mass and mixing matrices that need little fine- tuning of prefactors. Fitting with quark andmore » lepton masses run to the GUT scale and known mixing angles allows us to make predictions for the neutrino masses and hierarchy, the octant of the atmospheric mixing angle, leptonic CP violation, Majorana phases, and the effective mass observed in neutrinoless double beta decay.« less

Theoretical uncertainties in the calculation of supersymmetric dark matter observables

NASA Astrophysics Data System (ADS)

Bergeron, Paul; Sandick, Pearl; Sinha, Kuver

2018-05-01

We estimate the current theoretical uncertainty in supersymmetric dark matter predictions by comparing several state-of-the-art calculations within the minimal supersymmetric standard model (MSSM). We consider standard neutralino dark matter scenarios — coannihilation, well-tempering, pseudoscalar resonance — and benchmark models both in the pMSSM framework and in frameworks with Grand Unified Theory (GUT)-scale unification of supersymmetric mass parameters. The pipelines we consider are constructed from the publicly available software packages SOFTSUSY, SPheno, FeynHiggs, SusyHD, micrOMEGAs, and DarkSUSY. We find that the theoretical uncertainty in the relic density as calculated by different pipelines, in general, far exceeds the statistical errors reported by the Planck collaboration. In GUT models, in particular, the relative discrepancies in the results reported by different pipelines can be as much as a few orders of magnitude. We find that these discrepancies are especially pronounced for cases where the dark matter physics relies critically on calculations related to electroweak symmetry breaking, which we investigate in detail, and for coannihilation models, where there is heightened sensitivity to the sparticle spectrum. The dark matter annihilation cross section today and the scattering cross section with nuclei also suffer appreciable theoretical uncertainties, which, as experiments reach the relevant sensitivities, could lead to uncertainty in conclusions regarding the viability or exclusion of particular models.

Vector-like quarks and leptons, SU(5) ⊗ SU(5) grand unification, and proton decay

NASA Astrophysics Data System (ADS)

Lee, Chang-Hun; Mohapatra, Rabindra N.

2017-02-01

SU(5) ⊗ SU(5) provides a minimal grand unification scheme for fermions and gauge forces if there are vector-like quarks and leptons in nature. We explore the gauge coupling unification in a non-supersymmetric model of this type, and study its implications for proton decay. The properties of vector-like quarks and intermediate scales that emerge from coupling unification play a central role in suppressing proton decay. We find that in this model, the familiar decay mode p → e +π0 may have a partial lifetime within the reach of currently planned experiments.

Gauge coupling unification and nonequilibrium thermal dark matter.

PubMed

Mambrini, Yann; Olive, Keith A; Quevillon, Jérémie; Zaldívar, Bryan

2013-06-14

We study a new mechanism for the production of dark matter in the Universe which does not rely on thermal equilibrium. Dark matter is populated from the thermal bath subsequent to inflationary reheating via a massive mediator whose mass is above the reheating scale T(RH). To this end, we consider models with an extra U(1) gauge symmetry broken at some intermediate scale (M(int) ≃ 10(10)-10(12) GeV). We show that not only does the model allow for gauge coupling unification (at a higher scale associated with grand unification) but it can provide a dark matter candidate which is a standard model singlet but charged under the extra U(1). The intermediate scale gauge boson(s) which are predicted in several E6/SO(10) constructions can be a natural mediator between dark matter and the thermal bath. We show that the dark matter abundance, while never having achieved thermal equilibrium, is fixed shortly after the reheating epoch by the relation T(RH)(3)/M(int)(4). As a consequence, we show that the unification of gauge couplings which determines M(int) also fixes the reheating temperature, which can be as high as T(RH) ≃ 10(11) GeV.

SU(6) GUT breaking on a projective plane

NASA Astrophysics Data System (ADS)

Anandakrishnan, Archana; Raby, Stuart

2013-03-01

We consider a 6-dimensional supersymmetric SU(6) gauge theory and compactify two extra-dimensions on a multiply-connected manifold with non-trivial topology. The SU(6) is broken down to the Standard Model gauge groups in two steps by an orbifold projection, followed by a Wilson line. The Higgs doublets of the low energy electroweak theory come from a chiral adjoint of SU(6). We thus have gauge-Higgs unification. The three families of the Standard Model can either be located in the 6D bulk or at 4D N=1 supersymmetric fixed points. We calculate the Kaluza-Klein spectrum of states arising as a result of the orbifolding. We also calculate the threshold corrections to the coupling constants due to this tower of states at the lowest compactification scale. We study the regions of parameter space of this model where the threshold corrections are consistent with low energy physics. We find that the couplings receive only logarithmic corrections at all scales. This feature can be attributed to the large N=2 6D SUSY of the underlying model.

Neutrino masses and mixings as an evidence of GUT, and the impact to (flavor changing) nucleon decay

NASA Astrophysics Data System (ADS)

Maekawa, Nobuhiro; Muramatsu, Yu

2017-11-01

First, we see that the observed data of quark and lepton masses and mixings, which has been completed by adding neutrino data, can be a qualitative signature of S U(5) grand unified theory (GUT). Actually, an assumption, 10 fields induce stronger hierarchy in Yukawa couplings than 5 ¯ fields, can explain all hierarchical structures of quark and lepton masses and mixings. Second, we see the attractiveness of E6 GUT, in which the above assumption in S U(5) GUT can be derived and as the result various Yukawa hierarchies of quarks and leptons can be obtained from only one basic hierarchy. Third, we compare the predictions for nucleon decay among several GUTs with S U(5), S O(10), and E6 unification group which satisfy the above important assumption for Yukawa hierarchy, since this understanding about Yukawa structures reduces the ambiguities in prediction of nucleon decay via superheavy gauge boson exchange. We stress the importance of observations for several decay modes. One of them is flavor changing nucleon decay, for example, P → π0 µ+, which is the decay mode that SuperKamiokande has reported two events in the signal region. This article is based on our works in Ref.[1, 2

Effects of grand unification interactions on weak symmetry breaking in supergravity theories

NASA Astrophysics Data System (ADS)

Moxhay, Peter; Yamamoto, Katsuji

Possible effects of grand unification interactions on SU(2) × U(1) breaking are investigated by explicitly considering a supersymmetric SU(5) model coupled to N = 1 supergravity. Some remarkable features concerning the effects of renormalization on the effective soft supersymmetry breaking terms of SU(5) in the GUT region MP - MG are clarified, which are relevant for determining the SU(3) × SU(2) × U(1) theory below MG. In particular, the (mass) 2 of the Higgs doublets, g Hm g2and g overlineHm g2, might become significantly small at M G (g H ⋍ g overlineH ≈ 0.1) through the effect of SU(5) couplings such as overlineHø EH . Then, gH can rather easily become negative below MG, so as to realize SU(2) × U(1) breaking naturally even for the "diet" top quark case ( mt ≈ 40 GeV). On the other hand, if g H ⋍ g overlineH ⋍ 1 at M G by neglecting the grand unification interactions, some careful tuning of μ32/ mg2 is required with an accuracy ⪅10 -2 to achieve SU(2) × U(1) breaking with "diet" top quark, though a mass term μ 32( overlineHH) may be present.

Grand unification and low scale implications: D2 parity for unification and neutrino masses

NASA Astrophysics Data System (ADS)

Tavartkiladze, Zurab

2014-06-01

The Grand Unified SU(5)-SU(5)' model, augmented with D2 Parity, is considered. The latter play crucial role for phenomenology. The model has several novel properties and gives interesting phenomenological implications. The charged leptons together with right handed (or sterile) neutrinos emerge es composite states. Within considered scenario, we study the charged fermion and neutrino mass generation. Moreover, we show that the model gives successful gauge coupling unification.

LHC phenomenology of natural MSSM with non-universal gaugino masses at the unification scale

NASA Astrophysics Data System (ADS)

Abe, Hiroyuki; Kawamura, Junichiro; Omura, Yuji

2015-08-01

In this letter, we study collider phenomenology in the supersymmetric Standard Model with a certain type of non-universal gaugino masses at the gauge coupling unification scale, motivated by the little hierarchy problem. In this scenario, especially the wino mass is relatively large compared to the gluino mass at the unification scale, and the heavy wino can relax the fine-tuning of the higgsino mass parameter, so-called μ-parameter. Besides, it will enhance the lightest Higgs boson mass due to the relatively large left-right mixing of top squarks through the renormalization group (RG) effect. Then 125 GeV Higgs boson could be accomplished, even if the top squarks are lighter than 1 TeV and the μ parameter is within a few hundreds GeV. The right-handed top squark tends to be lighter than the other sfermions due to the RG runnings, then we focus on the top squark search at the LHC. Since the top squark is almost right-handed and the higgsinos are nearly degenerate, 2 b + E T miss channel is the most sensitive to this scenario. We figure out current and expected experimental bounds on the lightest top squark mass and model parameters at the gauge coupling unification scale.

Phenomenology with F-theory S U (5 )

NASA Astrophysics Data System (ADS)

Leontaris, George K.; Shafi, Qaisar

2017-09-01

We explore the low-energy phenomenology of an F-theory-based S U (5 ) model which, in addition to the known quarks and leptons, contains Standard Model (SM) singlets and vectorlike color triplets and S U (2 ) doublets. Depending on their masses and couplings, some of these new particles may be observed at the LHC and future colliders. We discuss the restrictions by Cabibbo-Kobayashi-Maskawa matrix constraints on their mixing with the ordinary down quarks of the three chiral families. The model is consistent with gauge coupling unification at the usual supersymmetric GUT scale; dimension-five proton decay is adequately suppressed, while dimension-six decay mediated by the superheavy gauge bosons is enhanced by a factor of 5-7. The third generation charged fermion Yukawa couplings yield the corresponding low-energy masses in reasonable agreement with observations. The hierarchical nature of the masses of lighter generations is accounted for via nonrenormalizable interactions, with the perturbative vacuum expectation values (VEVs) of the SM singlet fields playing an essential role.

One leptoquark to unify them? Neutrino masses and unification in the light of (g - 2)μ, R D (⋆) and RK anomalies

NASA Astrophysics Data System (ADS)

Popov, Oleg; White, G. A.

2017-10-01

Leptoquarks have been proposed as a possible explanation of anomalies in B bar ↦D* τ ν bar decays, the apparent anomalies in (g - 2) μ experiments and a violation of lepton universality. Motivated by this, we examine other motivations of leptoquarks: radiatively induced neutrino masses in the presence of a discrete symmetry that prevents a tree level see-saw mechanism, gauge coupling unification, and vacuum stability at least up to the unification scale. We present a new model for radiatively generating a neutrino mass which can significantly improve gauge coupling unification at one loop. We discuss this, and other models in the light of recent work on flavour anomalies.

Effective field theory approach to trans-TeV supersymmetry: covariant matching, Yukawa unification and Higgs couplings

NASA Astrophysics Data System (ADS)

Wells, James D.; Zhang, Zhengkang

2018-05-01

Dismissing traditional naturalness concerns while embracing the Higgs boson mass measurement and unification motivates careful analysis of trans-TeV supersymmetric theories. We take an effective field theory (EFT) approach, matching the Minimal Supersymmetric Standard Model (MSSM) onto the Standard Model (SM) EFT by integrating out heavy superpartners, and evolving MSSM and SMEFT parameters according to renormalization group equations in each regime. Our matching calculation is facilitated by the recent covariant diagrams formulation of functional matching techniques, with the full one-loop SUSY threshold corrections encoded in just 30 diagrams. Requiring consistent matching onto the SMEFT with its parameters (those in the Higgs potential in particular) measured at low energies, and in addition requiring unification of bottom and tau Yukawa couplings at the scale of gauge coupling unification, we detail the solution space of superpartner masses from the TeV scale to well above. We also provide detailed views of parameter space where Higgs coupling measurements have probing capability at future colliders beyond the reach of direct superpartner searches at the LHC.

The Supersymmetric Fat Higgs

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harnik, Roni

2004-10-27

Supersymmetric models have traditionally been assumed to be perturbative up to high scales due to the requirement of calculable unification. In this note I review the recently proposed `Fat Higgs' model which relaxes the requirement of perturbativity. In this framework, an NMSSM-like trilinear coupling becomes strong at some intermediate scale. The NMSSM Higgses are meson composites of an asymptotically-free gauge theory. This allows us to raise the mass of the Higgs, thus alleviating the MSSM of its fine tuning problem. Despite the strong coupling at an intermediate scale, the UV completion allows us to maintain gauge coupling unification.

Split Dirac Supersymmetry: An Ultraviolet Completion of Higgsino Dark Matter

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fox, Patrick J.; Kribs, Graham D.; Martin, Adam

2014-10-07

Motivated by the observation that the Higgs quartic coupling runs to zero at an intermediate scale, we propose a new framework for models of split supersymmetry, in which gauginos acquire intermediate scale Dirac masses ofmore » $$\\sim 10^{8-11}$$ GeV. Scalar masses arise from one-loop finite contributions as well as direct gravity-mediated contributions. Like split supersymmetry, one Higgs doublet is fine-tuned to be light. The scale at which the Dirac gauginos are introduced to make the Higgs quartic zero is the same as is necessary for gauge coupling unification. Thus, gauge coupling unification persists (nontrivially, due to adjoint multiplets), though with a somewhat higher unification scale $$\\gtrsim 10^{17}$$ GeV. The $$\\mu$$-term is naturally at the weak scale, and provides an opportunity for experimental verification. We present two manifestations of Split Dirac Supersymmetry. In the "Pure Dirac" model, the lightest Higgsino must decay through R-parity violating couplings, leading to an array of interesting signals in colliders. In the "Hypercharge Impure" model, the bino acquires a Majorana mass that is one-loop suppressed compared with the Dirac gluino and wino. This leads to weak scale Higgsino dark matter whose overall mass scale, as well as the mass splitting between the neutral components, is naturally generated from the same UV dynamics. We outline the challenges to discovering pseudo-Dirac Higgsino dark matter in collider and dark matter detection experiments.« less

Common origin of 3.55 keV x-ray line and gauge coupling unification with left-right dark matter

NASA Astrophysics Data System (ADS)

Borah, Debasish; Dasgupta, Arnab; Patra, Sudhanwa

2017-12-01

We present a minimal left-right dark matter framework that can simultaneously explain the recently observed 3.55 keV x-ray line from several galaxy clusters and gauge coupling unification at high energy scale. Adopting a minimal dark matter strategy, we consider both left and right handed triplet fermionic dark matter candidates which are stable by virtue of a remnant Z2≃(-1 )B -L symmetry arising after the spontaneous symmetry breaking of left-right gauge symmetry to that of the standard model. A scalar bitriplet field is incorporated whose first role is to allow radiative decay of right handed triplet dark matter into the left handed one and a photon with energy 3.55 keV. The other role this bitriplet field at TeV scale plays is to assist in achieving gauge coupling unification at a high energy scale within a nonsupersymmetric S O (10 ) model while keeping the scale of left-right gauge symmetry around the TeV corner. Apart from solving the neutrino mass problem and giving verifiable new contributions to neutrinoless double beta decay and charged lepton flavor violation, the model with TeV scale gauge bosons can also give rise to interesting collider signatures like diboson excess, dilepton plus two jets excess reported recently in the large hadron collider data.

The minimal GUT with inflaton and dark matter unification

NASA Astrophysics Data System (ADS)

Chen, Heng-Yu; Gogoladze, Ilia; Hu, Shan; Li, Tianjun; Wu, Lina

2018-01-01

Giving up the solutions to the fine-tuning problems, we propose the non-supersymmetric flipped SU(5)× U(1)_X model based on the minimal particle content principle, which can be constructed from the four-dimensional SO(10) models, five-dimensional orbifold SO(10) models, and local F-theory SO(10) models. To achieve gauge coupling unification, we introduce one pair of vector-like fermions, which form a complete SU(5)× U(1)_X representation. The proton lifetime is around 5× 10^{35} years, neutrino masses and mixing can be explained via the seesaw mechanism, baryon asymmetry can be generated via leptogenesis, and the vacuum stability problem can be solved as well. In particular, we propose that inflaton and dark matter particles can be unified to a real scalar field with Z_2 symmetry, which is not an axion and does not have the non-minimal coupling to gravity. Such a kind of scenarios can be applied to the generic scalar dark matter models. Also, we find that the vector-like particle corrections to the B_s^0 masses might be about 6.6%, while their corrections to the K^0 and B_d^0 masses are negligible.

Higgs boson, sparticle masses and neutralino Dark Matter in Yukawa unified models

NASA Astrophysics Data System (ADS)

Un, Cem Salih

This dissertation collects our results that we obtain for a class of Yukawa unified SO(10) grand unified theories with non-universal soft supersymmetry breaking (SSB) gaugino mass parameters. As known for a long time, in contrast to its non-supersymmetrical version, SO(10) grand unified theories predict Yukawa coupling unification as well as gauge coupling and matter field unifications. The models considered in this thesis are assumed to be in the framework of gravity mediated supersymmetry breaking, and boundary conditions among the SSB terms are set by the group theoretical structure and breaking patterns of SO(10) at the grand unification scale (MGUT). In addition, we assume universality in the SSB mass terms assigned to the sfermion generations. Since Yukawa coupling unification implies contradictory mass relations for the first two generations, we consider a model with a larger Higgs sector. In this case, we assume that the MSSM Higgs doublets solely reside in 10 dimensional representation (10 H) of SO(10) and extra Higgs fields negligibly couple to the third generation sfermions in order to maintain Yukawa coupling unification for the third generation (when we mention Yukawa unification throughout this thesis, we mean Yukawa unification for the third family, a.k.a. t -b-tau Yukawa unification). First we consider a supersymmetric grand unified model in which SO(10) breaks into the MSSM via non-renormalizable dimension-5 operators involving non-singlet F--terms. In our case, we consider an F--term belonging to 54 dimensional representation of SO(10) and it develops a non-zero vacuum expectation value that non-trivially generates the SSB gaugino masses such that M 1 : M2 : M3 = --1 : --3 : 2. We consider the case with mu, M 1, M2 > 0 and M3 < 0 such that muM2 >0 and muM 3 < 0 always hold. This model with non-universal and relative-sign gaugino masses has one less parameter by setting the masses of Higgs doublets to be equivalent to each other at MGUT than those in the standard approach to Yukawa coupling unification. We briefly show also that Yukawa unification is possible even with one less parameter, if one considers a case in which all scalars of the MSSM including the Higgs doublets are assigned with the same SSB mass term. In the case of relative-sign SSB mass terms, the gaugino mass relation forms a subspace of SU(4)c x SU(2)L x SU(2) R (4-2-2). Even though 4-2-2 does not require gauge coupling unification, if one assumes that 4-2-2 breaks into the MSSM at an energy scale ˜ MGUT, then it can hold gauge coupling unification as well as Yukawa unification. As a generalization of the previous model, 4-2-2 results in a heavy spectrum for the color particles (˜ 3 TeV ) as well. We conclude this thesis by considering the anomalous magnetic moment of muon (muon g -- 2). First, we examine the conditions that are necessary in order to be consistent with the experimental measurements. Since the supersymmetric contribution to muon g -- 2 evolves as 1/M, where M is mass of the sparticle running in the loop, the MSSM needs to have light smuons and gauginos (bino and wino), while the 125 GeV Higgs boson requires heavier spectra. In order to resolve this conflict, we consider a case in which the first two generations of sfermions are split from the third generation in their SSB mass. Similarly the MSSM Higgs doublets have different masses from each other, while universality in gaugino masses is held. We show that our results can simultaneously be consistent with 125 GeV Higgs boson and muon g -- 2 within 1sigma deviation from its theoretical value. (Abstract shortened by UMI.)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chizhov, M. V., E-mail: mih@phys.uni-sofia.bg; Bednyakov, V. A., E-mail: bedny@jinr.ru

The gauge coupling unification can be achieved at a unification scale around 5×10{sup 13} GeV if the Standard Model scalar sector is extended with extra Higgs-like doublets. The relevant new scalar degrees of freedom in the form of chiral Z* and W* vector bosons might “be visible” already at about 700 GeV. Their eventual preferred coupling to the heavy quarks explains the non observation of these bosons in the first LHC run and provides promising expectation for the second LHC run.

Advantages of unity with SU(4)-color: Reflections through neutrino oscillations, baryogenesis and proton decay

NASA Astrophysics Data System (ADS)

Pati, Jogesh C.

2017-03-01

By way of paying tribute to Abdus Salam, I first recall the ideas of higher unification which the two of us introduced in 1972-73 to remove certain shortcomings in the status of particle physics prevailing then, and then present their current role in theory as well as experiments. These attempts initiated the idea of grand unification and provided the core symmetry-structure G(2, 2, 4) = SU(2)L × SU(2)R × SU(4)-color towards such a unification. Embodied with quark-lepton unification and left-right symmetry, the symmetry G(2, 2, 4) is uniquely chosen as being the minimal one that permits members of a family to belong to a single multiplet. The minimal extension of G(2, 2, 4) to a simple group is given by the attractive SO(10)-symmetry that was suggested a year later. The new concepts, and the many advantages introduced by this core symmetry (which are, of course, retained by SO(10) as well) are noted. These include explanations of the observed: (i) (rather weird) electroweak and color quantum numbers of the members of a family; (ii) quantization of electric charge; (iii) electron-proton charge-ratio being - 1; (iv) the co-existence of quarks and leptons; (v) likewise that of the three basic forces — the weak, electromagnetic and strong; (vi) the non-trivial cancelation of the triangle anomalies within each family; and opening the door for (vii) the appealing concept of parity being an exact symmetry of nature at the fundamental level. In addition, as a distinguishing feature, both because of SU(4)-color and independently because of SU(2)R as well, the symmetry G(2, 2, 4) introduced, to my knowledge, for the first time in the literature: (viii) a new kind of matter — the right-handed (RH) neutrino (νR) — as a compelling member of each family, and together with it; (ix) (B-L) as a local symmetry. The RH neutrions — contrary to prejudices held in the 1970’s against neutrinos being massive and thereby against the existence of νR’s as well — have in fact turned out to be an asset. They are needed to (a) understand naturally the tiny mass-scales observed in neutrino oscillations by combining the seesaw mechanism together with the unification ideas based on the symmetry SU(4)-color, and also (b) to implement the attractive mechanism of baryogenesis via leptogenesis. The quantitative success of the attempts as regards understanding both (a) and (b) are discussed in Sec. 6. These provide a clear support simultaneously for the following three features: (i) the seesaw mechanism, (ii) the SU(4)-color route to higher unification based on a symmetry like SO(10) or a string-derived G(2, 2, 4) symmetry in 4D, as opposed to alternative symmetries like SU(5) or even [SU(3)]3, and (iii) the (B-L)-breaking scale being close to the unification scale ˜ 2 × 1016 GeV. The observed dramatic meeting of the three gauge couplings in the context of low-energy supersymmetry, at a scale MU ˜ 2 × 1016 GeV, providing strong evidence in favor of the ideas of both grand unification and supersymmetry, is discussed in Sec. 3. The implications of such a meeting in the context of string-unification are briefly mentioned. Weighing the possibility of a stringy origin of gauge coupling unification versus the familiar problem of doublet-triplet splitting in supersymmetric SO(10) (or SU(5)), I discuss the common advantages as well as relative merits and demerits of an effective SO(10) versus a string-derived G(2, 2, 4) symmetry in 4D. In Sec. 7, I discuss the hallmark prediction of grand unification, viz. proton decay, which is a generic feature of most models of grand unification. I present results of works carried out in collaboration with Babu and Wilczek and most recently with Babu and Tavartkiladze on expectations for decay modes and lifetimes for proton decay, including upper limits for such lifetimes, in the context of a well-motivated class of supersymmetric SO(10)-models. In view of such expectations, I stress the pressing need for having the next-generation large underground detectors — like DUNE and HyperKamiokande — coupled to long-baseline neutrino beams to search simultaneously with high sensitivity for (a) proton decay, (b) neutrino oscillations and (c) supernova neutrinos. It is remarked that the potential for major discoveries through these searches would be high. Some concluding remarks on the invaluable roles of neutrinos and especially of proton decay in probing physics at the highest energy scales are made in the last section. The remarkable success of a class of supersymmetric grand unification models (discussed here) in explaining a large set of distinct phenomena is summarized. Noticing such a success and yet its limitations in addressing some fundamental issues within its premises, such as an understanding of the origin of the three families, and most importantly, the realization of a well-understood unified quantum theory of gravity describing reality, some wishes are expressed on the possible emergence and the desirable role of a string-derived grand-unified bridge between string/M-theory in higher dimensions and the world of phenomena at low energies.

Global fits of GUT-scale SUSY models with GAMBIT

NASA Astrophysics Data System (ADS)

Athron, Peter; Balázs, Csaba; Bringmann, Torsten; Buckley, Andy; Chrząszcz, Marcin; Conrad, Jan; Cornell, Jonathan M.; Dal, Lars A.; Edsjö, Joakim; Farmer, Ben; Jackson, Paul; Krislock, Abram; Kvellestad, Anders; Mahmoudi, Farvah; Martinez, Gregory D.; Putze, Antje; Raklev, Are; Rogan, Christopher; de Austri, Roberto Ruiz; Saavedra, Aldo; Savage, Christopher; Scott, Pat; Serra, Nicola; Weniger, Christoph; White, Martin

2017-12-01

We present the most comprehensive global fits to date of three supersymmetric models motivated by grand unification: the constrained minimal supersymmetric standard model (CMSSM), and its Non-Universal Higgs Mass generalisations NUHM1 and NUHM2. We include likelihoods from a number of direct and indirect dark matter searches, a large collection of electroweak precision and flavour observables, direct searches for supersymmetry at LEP and Runs I and II of the LHC, and constraints from Higgs observables. Our analysis improves on existing results not only in terms of the number of included observables, but also in the level of detail with which we treat them, our sampling techniques for scanning the parameter space, and our treatment of nuisance parameters. We show that stau co-annihilation is now ruled out in the CMSSM at more than 95% confidence. Stop co-annihilation turns out to be one of the most promising mechanisms for achieving an appropriate relic density of dark matter in all three models, whilst avoiding all other constraints. We find high-likelihood regions of parameter space featuring light stops and charginos, making them potentially detectable in the near future at the LHC. We also show that tonne-scale direct detection will play a largely complementary role, probing large parts of the remaining viable parameter space, including essentially all models with multi-TeV neutralinos.

Holographic Noise in Michelson Interferometers: A Direct Experimental Probe of Unification at the Planck Scale

ScienceCinema

Hogan, Craig

2017-12-22

Classical spacetime and quantum mass-energy form the basis of all of physics. They become inconsistent at the Planck scale, 5.4 times 10^{-44} seconds, which may signify a need for reconciliation in a unified theory. Although proposals for unified theories exist, a direct experimental probe of this scale, 16 orders of magnitude above Tevatron energy, has seemed hopelessly out of reach. However in a particular interpretation of holographic unified theories, derived from black hole evaporation physics, a world assembled out of Planck-scale waves displays effects of unification with a new kind of uncertainty in position at the Planck diffraction scale, the geometric mean of the Planck length and the apparatus size. In this case a new phenomenon may measurable, an indeterminacy of spacetime position that appears as noise in interferometers. The colloquium will discuss the theory of the effect, and our plans to build a holographic interferometer at Fermilab to measure it.

LHC phenomenology of SO(10) models with Yukawa unification

NASA Astrophysics Data System (ADS)

Anandakrishnan, Archana; Bryant, B. Charles; Raby, Stuart; Wingerter, Akın

2013-10-01

In this paper we study an SO(10) SUSY GUT with Yukawa unification for the third generation. We perform a global χ2 analysis given to obtain the GUT boundary conditions consistent with 11 low-energy observables, including the top, bottom and tau masses. We assume a universal mass, m16, for squarks and sleptons and a universal gaugino mass, M1/2. We then analyze the phenomenological consequences for the LHC for 15 benchmark models with fixed m16=20TeV and with varying values of the gluino mass. The goal of the present work is to (i) evaluate the lower bound on the gluino mass in our model coming from the most recent published data of CMS and (ii) to compare this bound with similar bounds obtained by CMS using simplified models. The bottom line is that the bounds coming from the same-sign dilepton analysis are comparable for our model and the simplified model studied assuming B(g˜→tt¯χ˜10)=100%. However the bounds coming from the purely hadronic analyses for our model are 10%-20% lower than obtained for the simplified models. This is due to the fact that for our models the branching ratio for the decay g˜→gχ˜1,20 is significant. Thus there are significantly fewer b-jets. We find a lower bound on the gluino mass in our models with Mg˜≳1000GeV. Finally, there is a theoretical upper bound on the gluino mass which increases with the value of m16. For m16≤30TeV, the gluino mass satisfies Mg˜≤2.8TeV at 90% C.L. Thus, unless we further increase the amount of fine-tuning, we expect gluinos to be discovered at LHC 14.

The minimal SUSY B - L model: simultaneous Wilson lines and string thresholds

DOE PAGES

Deen, Rehan; Ovrut, Burt A.; Purves, Austin

2016-07-08

In previous work, we presented a statistical scan over the soft supersymmetry breaking parameters of the minimal SUSY B - L model. For specificity of calculation, unification of the gauge parameters was enforced by allowing the two Z 3×Z 3 Wilson lines to have mass scales separated by approximately an order of magnitude. This introduced an additional “left-right” sector below the unification scale. In this paper, for three important reasons, we modify our previous analysis by demanding that the mass scales of the two Wilson lines be simultaneous and equal to an “average unification” mass U >. The present analysismore » is 1) more “natural” than the previous calculations, which were only valid in a very specific region of the Calabi-Yau moduli space, 2) the theory is conceptually simpler in that the left-right sector has been removed and 3) in the present analysis the lack of gauge unification is due to threshold effects — particularly heavy string thresholds, which we calculate statistically in detail. As in our previous work, the theory is renormalization group evolved from U > to the electroweak scale — being subjected, sequentially, to the requirement of radiative B - L and electroweak symmetry breaking, the present experimental lower bounds on the B - L vector boson and sparticle masses, as well as the lightest neutral Higgs mass of ~125 GeV. The subspace of soft supersymmetry breaking masses that satisfies all such constraints is presented and shown to be substantial.« less

Dark matter in E 6 Grand unification

NASA Astrophysics Data System (ADS)

Schwichtenberg, Jakob

2018-02-01

We discuss fermionic dark matter in non-supersymmetric E 6 Grand Unification. The fundamental representation of E 6 contains, in addition to the standard model fermions, exotic fermions and we argue that one of them is a viable, interesting dark matter candidate. Its stability is guaranteed by a discrete remnant symmetry, which is an unbroken subgroup of the E 6 gauge symmetry. We compute the symmetry breaking scales and the effect of possible threshold corrections by solving the renormalization group equations numerically after imposing gauge coupling unification. Since the Yukawa couplings of the exotic and the standard model fermions have a common origin, the mass of the dark matter particles is constrained. We find a mass range of 3 · 109 GeV ≲ m DM ≲ 1 · 1013 GeV for our E 6 dark matter candidate, which is within the reach of next-generation direct detection experiments.

Towards gauge coupling unification in left-right symmetric SU (3 )c×SU (3 )L×SU (3 )R×U (1 )X theories

NASA Astrophysics Data System (ADS)

Hati, Chandan; Patra, Sudhanwa; Reig, Mario; Valle, José W. F.; Vaquera-Araujo, C. A.

2017-07-01

We consider the possibility of gauge coupling unification within the simplest realizations of the SU (3 )c×SU (3 )L×SU (3 )R×U (1 )X gauge theory. We present a first exploration of the renormalization group equations governing the "bottom-up" evolution of the gauge couplings in a generic model with free normalization for the generators. Interestingly, we find that for a SU (3 )c×SU (3 )L×SU (3 )R×U (1 )X symmetry breaking scale MX as low as a few TeV one can achieve unification in the presence of leptonic octets. We briefly comment on possible grand unified theory frameworks which can embed the SU (3 )c×SU (3 )L×SU (3 )R×U (1 )X model as well as possible implications, such as lepton flavor violating physics at the LHC.

No-scale SU( 5) super-GUTs

DOE PAGES

Ellis, John; Evans, Jason L.; Nagata, Natsumi; ...

2017-04-12

We reconsider the minimal SU( 5) grand unified theory (GUT) in the context of no-scale supergravity inspired by string compactification scenarios, assuming that the soft supersymmetry-breaking parameters satisfy universality conditions at some input scale M in above the GUT scale M GUT. When setting up such a no-scale super-GUT model, special attention must be paid to avoiding the Scylla of rapid proton decay and the Charybdis of an excessive density of cold dark matter, while also having an acceptable mass for the Higgs boson. Furthermore, we do not find consistent solutions if none of the matter and Higgs fields aremore » assigned to twisted chiral supermultiplets, even in the presence of Giudice–Masiero terms. But, consistent solutions may be found if at least one fiveplet of GUT Higgs fields is assigned to a twisted chiral supermultiplet, with a suitable choice of modular weights. Spin-independent dark matter scattering may be detectable in some of these consistent solutions.« less

Maximal sfermion flavour violation in super-GUTs

DOE PAGES

Ellis, John; Olive, Keith A.; Velasco-Sevilla, Liliana

2016-10-20

We consider supersymmetric grand unified theories with soft supersymmetry-breaking scalar masses m 0 specified above the GUT scale (super-GUTs) and patterns of Yukawa couplings motivated by upper limits on flavour-changing interactions beyond the Standard Model. If the scalar masses are smaller than the gaugino masses m 1/2, as is expected in no-scale models, the dominant effects of renormalisation between the input scale and the GUT scale are generally expected to be those due to the gauge couplings, which are proportional to m 1/2 and generation independent. In this case, the input scalar masses m 0 may violate flavour maximally, amore » scenario we call MaxSFV, and there is no supersymmetric flavour problem. As a result, we illustrate this possibility within various specific super-GUT scenarios that are deformations of no-scale gravity« less

LHC-scale left-right symmetry and unification

NASA Astrophysics Data System (ADS)

Arbeláez, Carolina; Romão, Jorge C.; Hirsch, Martin; Malinský, Michal

2014-02-01

We construct a comprehensive list of nonsupersymmetric standard model extensions with a low-scale left-right (LR)-symmetric intermediate stage that may be obtained as simple low-energy effective theories within a class of renormalizable SO(10) grand unified theories. Unlike the traditional "minimal" LR models many of our example settings support a perfect gauge coupling unification even if the LR scale is in the LHC domain at a price of only (a few copies of) one or two types of extra fields pulled down to the TeV-scale ballpark. We discuss the main aspects of a potentially realistic model building conforming the basic constraints from the quark and lepton sector flavor structure, proton decay limits, etc. We pay special attention to the theoretical uncertainties related to the limited information about the underlying unified framework in the bottom-up approach, in particular, to their role in the possible extraction of the LR-breaking scale. We observe a general tendency for the models without new colored states in the TeV domain to be on the verge of incompatibility with the proton stability constraints.

Search for nucleon decays induced by GUT magnetic monopoles with the MACRO experiment

NASA Astrophysics Data System (ADS)

Ambrosio, M.; Antolini, R.; Auriemma, G.; Bakari, D.; Baldini, A.; Barbarino, G. C.; Barish, B. C.; Battistoni, G.; Becherini, Y.; Bellotti, R.; Bemporad, C.; Bernardini, P.; Bilokon, H.; Bloise, C.; Bower, C.; Brigida, M.; Bussino, S.; Cafagna, F.; Calicchio, M.; Campana, D.; Carboni, M.; Caruso, R.; Cecchini, S.; Cei, F.; Chiarella, V.; Choudhary, B. C.; Coutu, S.; Cozzi, M.; de Cataldo, G.; Dekhissi, H.; de Marzo, C.; de Mitri, I.; Derkaoui, J.; de Vincenzi, M.; di Credico, A.; Erriquez, O.; Favuzzi, C.; Forti, C.; Fusco, P.; Giacomelli, G.; Giannini, G.; Giglietto, N.; Giorgini, M.; Grassi, M.; Grillo, A.; Guarino, F.; Gustavino, C.; Habig, A.; Hanson, K.; Heinz, R.; Iarocci, E.; Katsavounidis, E.; Katsavounidis, I.; Kearns, E.; Kim, H.; Kyriazopoulou, S.; Lamanna, E.; Lane, C.; Levin, D. S.; Lipari, P.; Longley, N. P.; Longo, M. J.; Loparco, F.; Maaroufi, F.; Mancarella, G.; Mandrioli, G.; Manzoor, S.; Margiotta, A.; Marini, A.; Martello, D.; Marzari-Chiesa, A.; Mazziotta, M. N.; Michael, D. G.; Monacelli, P.; Montaruli, T.; Monteno, M.; Mufson, S.; Musser, J.; Nicolò, D.; Nolty, R.; Orth, C.; Osteria, G.; Palamara, O.; Patera, V.; Patrizii, L.; Pazzi, R.; Peck, C. W.; Perrone, L.; Petrera, S.; Pistilli, P.; Popa, V.; Rainò, A.; Reynoldson, J.; Ronga, F.; Rrhioua, A.; Satriano, C.; Scapparone, E.; Scholberg, K.; Sciubba, A.; Serra, P.; Sioli, M.; Sirri, G.; Sitta, M.; Spinelli, P.; Spinetti, M.; Spurio, M.; Steinberg, R.; Stone, J. L.; Sulak, L. R.; Surdo, A.; Tarlè, G.; Togo, V.; Vakili, M.; Walter, C. W.; Webb, R.

2002-12-01

The interaction of a Grand Unification Magnetic Monopole with a nucleon can lead to a barion-number violating process in which the nucleon decays into a lepton and one or more mesons (catalysis of nucleon decay). In this paper we report an experimental study of the effects of a catalysis process in the MACRO detector. Using a dedicated analysis we obtain new magnetic monopole (MM) flux upper limits at the level of \\char1263\\cdot 10^{-16} cm^{-2} s^{-1} sr^{-1} for 1.1\\cdot 10^{-4} le \\vertβ\\vert le 5\\cdot 10^{-3}, based on the search for catalysis events in the MACRO data. We also analyze the dependence of the MM flux limit on the catalysis cross section.

750 GeV diphotons: implications for supersymmetric unification

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hall, Lawrence J.; Harigaya, Keisuke; Nomura, Yasunori

2016-03-03

A recent signal of 750 GeV diphotons at the LHC can be explained within the framework of supersymmetric unification by the introduction of vector quarks and leptons with Yukawa couplings to a singlet S that describes the 750 GeV resonance. We study the most general set of theories that allow successful gauge coupling unification, and find that these Yukawa couplings are severely constrained by renormalization group behavior: they are independent of ultraviolet physics and flow to values at the TeV scale that we calculate precisely. As a consequence the vector quarks and leptons must be light; typically in the regionmore » of 375 GeV to 700 GeV, and in certain cases up to 1 TeV. The 750 GeV resonance may have a width less than the experimental resolution; alternatively, with the mass splitting between scalar and pseudoscalar components of S arising from one-loop diagrams involving vector fermions, we compute an apparent width of 10s of GeV.« less

Cosmological density fluctuations produced by vacuum strings

NASA Astrophysics Data System (ADS)

Vilenkin, A.

1981-04-01

Consideration is given to the possible role of vacuum domain strings produced in the grand unification phase transition in the early universe in the generation of the density fluctuations giving rise to galaxies. The cosmological evolution of the strings formed in the grand unification phase transition is analyzed, with attention given to possible mechanisms for the damping out of oscillations produced by tension in convoluted strings and closed loops. The cosmological density fluctuations introduced by infinite strings and closed loops smaller than the horizon are then shown to be capable of giving rise to mass condensations on a scale of approximately 10 to the 9th solar masses at the time of the decoupling of radiation from matter, around which the galaxies condense. Differences between the present theory and that suggested by Zel'dovich (1980) are pointed out, and it is noted that string formation at the grand unification phase transition is possible only if the manifold of the degenerate vacua of the gauge theory is not simply connected.

Probing Inflationary Cosmology: The Atacama B-Mode Search (ABS)

NASA Astrophysics Data System (ADS)

Essinger-Hileman, Thomas

Observations of the Cosmic Microwave Background (CMB) have provided compelling evidence for the Standard Model of Cosmology and have led to the most precise estimates of cosmological parameters to date. Through its sensitivity to gravitational waves, the CMB provides a glimpse into the state of the universe just 10-35 seconds after the Big Bang and of physics on grand-unification-theory (GUT) energy scales around 1016 GeV, some 13 orders of magnitude above the energies achievable by current terrestrial particle accelerators. A gravitational-wave background (GWB) in the early universe would leave a unique, odd-parity pattern of polarization in the CMB called B modes, the magnitude of which is characterized by the tensor-to-scalar ratio, r. A GWB is generically predicted to exist by inflationary theories, and the current generation of CMB polarization experiments will probe the interesting parameter space of r < 0.05 corresponding to single-field inflationary models at GUT scales. I detail the design and construction of the Atacama B-Mode Search (ABS), which aims to measure the polarization of the CMB at degree angular scales where the primordial B-mode signal is expected to peak. ABS is a 145-GHz polarimeter that will operate from a high-altitude site in the Atacama Desert of Chile, consisting of a 60-cm crossed-Dragone telescope with cryogenic primary and secondary reflectors; an array of 240 feedhorn-coupled, transition-edge-sensor, bolometric polarimeters; and, a continuously-rotating, warm, sapphire half-wave plate (HWP) that will provide modulation of the incoming polarization of light. In this thesis, I describe the optical, mechanical, and cryogenic design of the receiver, including the reflector design, focal-plane layout, HWP design, and free-space lowpass filters. I describe physical-optics modeling of the reflector and feedhorn to validate the optical design. A matrix model that allows the calculation of the Mueller matrix of the anti-reflection-coated HWP for arbitrary frequency and angle of incidence is outlined. This will provide a framework for characterizing the ABS HWP in the field. Finally, the development of metal-mesh free space filters for ABS is described. ABS is anticipated to measure or place an upper limit on the tensor-to-scalar ratio at a level of r ˜ 0.03.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ellis, John; Evans, Jason L.; Nagata, Natsumi

We reconsider the minimal SU( 5) grand unified theory (GUT) in the context of no-scale supergravity inspired by string compactification scenarios, assuming that the soft supersymmetry-breaking parameters satisfy universality conditions at some input scale M in above the GUT scale M GUT. When setting up such a no-scale super-GUT model, special attention must be paid to avoiding the Scylla of rapid proton decay and the Charybdis of an excessive density of cold dark matter, while also having an acceptable mass for the Higgs boson. Furthermore, we do not find consistent solutions if none of the matter and Higgs fields aremore » assigned to twisted chiral supermultiplets, even in the presence of Giudice–Masiero terms. But, consistent solutions may be found if at least one fiveplet of GUT Higgs fields is assigned to a twisted chiral supermultiplet, with a suitable choice of modular weights. Spin-independent dark matter scattering may be detectable in some of these consistent solutions.« less

Phase transitions triggered by quantum fluctuations in the inflationary universe

NASA Technical Reports Server (NTRS)

Nagasawa, Michiyasu; Yokoyama, Junichi

1991-01-01

The dynamics of a second-order phase transition during inflation, which is induced by time-variation of spacetime curvature, is studied as a natural mechanism to produce topological defects of typical grand unification scales such as cosmic strings or global textures. It is shown that their distribution is almost scale-invariant with small- and large-scale cutoffs. Also discussed is how these cutoffs are given.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ellis, John; Olive, Keith A.; Velasco-Sevilla, Liliana

We consider supersymmetric grand unified theories with soft supersymmetry-breaking scalar masses m 0 specified above the GUT scale (super-GUTs) and patterns of Yukawa couplings motivated by upper limits on flavour-changing interactions beyond the Standard Model. If the scalar masses are smaller than the gaugino masses m 1/2, as is expected in no-scale models, the dominant effects of renormalisation between the input scale and the GUT scale are generally expected to be those due to the gauge couplings, which are proportional to m 1/2 and generation independent. In this case, the input scalar masses m 0 may violate flavour maximally, amore » scenario we call MaxSFV, and there is no supersymmetric flavour problem. As a result, we illustrate this possibility within various specific super-GUT scenarios that are deformations of no-scale gravity« less

Hyperquarks and bosonic preon bound states

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schmid, Michael L.; Buchmann, Alfons J.

2009-11-01

In a model in which leptons, quarks, and the recently introduced hyperquarks are built up from two fundamental spin-(1/2) preons, the standard model weak gauge bosons emerge as preon bound states. In addition, the model predicts a host of new composite gauge bosons, in particular, those responsible for hyperquark and proton decay. Their presence entails a left-right symmetric extension of the standard model weak interactions and a scheme for a partial and grand unification of nongravitational interactions based on, respectively, the effective gauge groups SU(6){sub P} and SU(9){sub G}. This leads to a prediction of the Weinberg angle at lowmore » energies in good agreement with experiment. Furthermore, using evolution equations for the effective coupling strengths, we calculate the partial and grand unification scales, the hyperquark mass scale, as well as the mass and decay rate of the lightest hyperhadron.« less

Supersymmetry, Supergravity, and Unification

NASA Astrophysics Data System (ADS)

Nath, Pran

2016-12-01

Dedication; Preface; 1. A brief history of unification; 2. Gravitation; 3. Non-abelian gauge theory; 4. Spontaneous breaking of global and local symmetries; 5. The Standard Model; 6. Anomalies; 7. Effective Lagrangians; 8. Supersymmetry; 9. Grand unification; 10. MSSM Lagrangian; 11. N = 1 supergravity; 12. Coupling of supergravity with matter and gauge fields; 13. Supergravity grand unification; 14. Phenomenology of supergravity grand unification; 15. CP violation in supergravity unified theories; 16. Proton stability in supergravity unified theories; 17. Cosmology, astroparticle physics and SUGRA unification; 18. Extended supergravities and supergravities from superstrings; 19. Specialized topics; 20. The future of unification; 21. Appendices; 22. Notations, conventions, and formulae; 23. Physical constants; 24. List of books and reviews for further reading; Index.

Spectral flow as a map between N = (2 , 0)-models

NASA Astrophysics Data System (ADS)

Athanasopoulos, P.; Faraggi, A. E.; Gepner, D.

2014-07-01

The space of (2 , 0) models is of particular interest among all heterotic-string models because it includes the models with the minimal SO (10) unification structure, which is well motivated by the Standard Model of particle physics data. The fermionic Z2 ×Z2 heterotic-string models revealed the existence of a new symmetry in the space of string configurations under the exchange of spinors and vectors of the SO (10) GUT group, dubbed spinor-vector duality. In this paper we generalize this idea to arbitrary internal rational conformal field theories (RCFTs). We explain how the spectral flow operator normally acting within a general (2 , 2) theory can be used as a map between (2 , 0) models. We describe the details, give an example and propose more simple currents that can be used in a similar way.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gim, Yongwan; Kim, Wontae, E-mail: yongwan89@sogang.ac.kr, E-mail: wtkim@sogang.ac.kr

In warm inflation scenarios, radiation always exists, so that the radiation energy density is also assumed to be finite when inflation starts. To find out the origin of the non-vanishing initial radiation energy density, we revisit thermodynamic analysis for a warm inflation model and then derive an effective Stefan-Boltzmann law which is commensurate with the temperature-dependent effective potential by taking into account the non-vanishing trace of the total energy-momentum tensors. The effective Stefan-Boltzmann law shows that the zero energy density for radiation at the Grand Unification epoch increases until the inflation starts and it becomes eventually finite at the initialmore » stage of warm inflation. By using the above effective Stefan-Boltzmann law, we also study the cosmological scalar perturbation, and obtain the sufficient radiation energy density in order for GUT baryogenesis at the end of inflation.« less

SAT Encoding of Unification in EL

NASA Astrophysics Data System (ADS)

Baader, Franz; Morawska, Barbara

Unification in Description Logics has been proposed as a novel inference service that can, for example, be used to detect redundancies in ontologies. In a recent paper, we have shown that unification in EL is NP-complete, and thus of a complexity that is considerably lower than in other Description Logics of comparably restricted expressive power. In this paper, we introduce a new NP-algorithm for solving unification problems in EL, which is based on a reduction to satisfiability in propositional logic (SAT). The advantage of this new algorithm is, on the one hand, that it allows us to employ highly optimized state-of-the-art SAT solvers when implementing an EL-unification algorithm. On the other hand, this reduction provides us with a proof of the fact that EL-unification is in NP that is much simpler than the one given in our previous paper on EL-unification.

Discrete symmetries in the heterotic-string landscape

NASA Astrophysics Data System (ADS)

Athanasopoulos, P.

2015-07-01

We describe a new type of discrete symmetry that relates heterotic-string models. It is based on the spectral flow operator which normally acts within a general N = (2, 2) model and we use this operator to construct a map between N = (2, 0) models. The landscape of N = (2, 0) models is of particular interest among all heterotic-string models for two important reasons: Firstly, N =1 spacetime SUSY requires (2, 0) superconformal invariance and secondly, models with the well motivated by the Standard Model SO(10) unification structure are of this type. This idea was inspired by a new discrete symmetry in the space of fermionic ℤ2 × ℤ2 heterotic-string models that exchanges the spinors and vectors of the SO(10) GUT group, dubbed spinor-vector duality. We will describe how to generalize this to arbitrary internal rational Conformal Field Theories.

A Re-Unification of Two Competing Models for Document Retrieval.

ERIC Educational Resources Information Center

Bodoff, David

1999-01-01

Examines query-oriented versus document-oriented information retrieval and feedback learning. Highlights include a reunification of the two approaches for probabilistic document retrieval and for vector space model (VSM) retrieval; learning in VSM and in probabilistic models; multi-dimensional scaling; and ongoing field studies. (LRW)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Freese, Katherine; Kinney, William H., E-mail: ktfreese@umich.edu, E-mail: whkinney@buffalo.edu

Natural inflation is a good fit to all cosmic microwave background (CMB) data and may be the correct description of an early inflationary expansion of the Universe. The large angular scale CMB polarization experiment BICEP2 has announced a major discovery, which can be explained as the gravitational wave signature of inflation, at a level that matches predictions by natural inflation models. The natural inflation (NI) potential is theoretically exceptionally well motivated in that it is naturally flat due to shift symmetries, and in the simplest version takes the form V(φ) = Λ{sup 4} [1 ± cos(Nφ/f)]. A tensor-to-scalar ratio r > 0.1 as seen by BICEP2 requiresmore » the height of any inflationary potential to be comparable to the scale of grand unification and the width to be comparable to the Planck scale. The Cosine Natural Inflation model agrees with all cosmic microwave background measurements as long as f ≥ m{sub Pl} (where m{sub Pl} = 1.22 × 10{sup 19} GeV) and Λ ∼ m{sub GUT} ∼ 10{sup 16} GeV. This paper also discusses other variants of the natural inflation scenario: we show that axion monodromy with potential V∝ φ{sup 2/3} is inconsistent with the BICEP2 limits at the 95% confidence level, and low-scale inflation is strongly ruled out. Linear potentials V ∝ φ are inconsistent with the BICEP2 limit at the 95% confidence level, but are marginally consistent with a joint Planck/BICEP2 limit at 95%. We discuss the pseudo-Nambu Goldstone model proposed by Kinney and Mahanthappa as a concrete realization of low-scale inflation. While the low-scale limit of the model is inconsistent with the data, the large-field limit of the model is marginally consistent with BICEP2. All of the models considered predict negligible running of the scalar spectral index, and would be ruled out by a detection of running.« less

Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis

PubMed Central

Sung, Jaeyun; Kim, Seunghyeon; Cabatbat, Josephine Jill T.; Jang, Sungho; Jin, Yong-Su; Jung, Gyoo Yeol; Chia, Nicholas; Kim, Pan-Jun

2017-01-01

A system-level framework of complex microbe–microbe and host–microbe chemical cross-talk would help elucidate the role of our gut microbiota in health and disease. Here we report a literature-curated interspecies network of the human gut microbiota, called NJS16. This is an extensive data resource composed of ∼570 microbial species and 3 human cell types metabolically interacting through >4,400 small-molecule transport and macromolecule degradation events. Based on the contents of our network, we develop a mathematical approach to elucidate representative microbial and metabolic features of the gut microbial community in a given population, such as a disease cohort. Applying this strategy to microbiome data from type 2 diabetes patients reveals a context-specific infrastructure of the gut microbial ecosystem, core microbial entities with large metabolic influence, and frequently produced metabolic compounds that might indicate relevant community metabolic processes. Our network presents a foundation towards integrative investigations of community-scale microbial activities within the human gut. PMID:28585563

Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis.

PubMed

Sung, Jaeyun; Kim, Seunghyeon; Cabatbat, Josephine Jill T; Jang, Sungho; Jin, Yong-Su; Jung, Gyoo Yeol; Chia, Nicholas; Kim, Pan-Jun

2017-06-06

A system-level framework of complex microbe-microbe and host-microbe chemical cross-talk would help elucidate the role of our gut microbiota in health and disease. Here we report a literature-curated interspecies network of the human gut microbiota, called NJS16. This is an extensive data resource composed of ∼570 microbial species and 3 human cell types metabolically interacting through >4,400 small-molecule transport and macromolecule degradation events. Based on the contents of our network, we develop a mathematical approach to elucidate representative microbial and metabolic features of the gut microbial community in a given population, such as a disease cohort. Applying this strategy to microbiome data from type 2 diabetes patients reveals a context-specific infrastructure of the gut microbial ecosystem, core microbial entities with large metabolic influence, and frequently produced metabolic compounds that might indicate relevant community metabolic processes. Our network presents a foundation towards integrative investigations of community-scale microbial activities within the human gut.

International Scientific Terminology and Neologisms in the Course of Unification.

ERIC Educational Resources Information Center

Stoberski, Zygmunt

1978-01-01

Provides a list of international medical and pharmaceutical terminology in three stages of development: (1) established international terms; (2) neologisms in the course of unification; and (3) recent neologisms in the course of unification. (AM)

PUP: An Architecture to Exploit Parallel Unification in Prolog

DTIC Science & Technology

1988-03-01

environment stacking mo del similar to the Warren Abstract Machine [23] since it has been shown to be super ior to other known models (see [21]). The storage...execute in groups of independent operations. Unifications belonging to different group s may not overlap. Also unification operations belonging to the...since all parallel operations on the unification units must complete before any of the units can star t executing the next group of parallel

GOCE-based height system unification between Greece and Turkey. First considerations over marine and land areas

NASA Astrophysics Data System (ADS)

Vergos, Georgios S.; Erol, Bihter; Natsiopoulos, Dimitrios A.; Grigoriadis, Vassilios N.; Serkan Işık, Mustafa; Tziavos, Ilias N.

2016-04-01

The unification of local vertical Datums (LVDs) at a country-wide scale has gained significant attention lately, due to the availability of GOCE-based Global Geopotential Models (GGMs). The latter, offer unprecedented geoid height accuracies at the 1-1.5 cm level for spherical harmonic expansions to d/o 225-230. Within a single country, several LVDs may be used, especially in the event of islandic nations, therefore the unification of all of them to a single nation-wide LVD is of utmost importance. The same holds for neighboring countries, where the unification of their vertical datums is necessary as a tool of engineering, cross-border collaboration and environmental and risk management projects. The aforementioned set the main scope of the work carried out in the frame of the present study, which referred to the use of GOCE and GOCE/GRACE GGMs in order to unify the LVDs of Greece and Turkey. It is well-known that the two countries share common borders and are a path for large-scale engineering projects in the energy sector. Therefore, the availability of a common reference for orthometric heights in both countries and/or the determination of the relative offset of their individual zero-level geopotential value poses an emerging issue. The determination of the geopotential value Wo(LVD) for the Greek and Turkish LVDs was first carried out separately for each region performing as well different estimates for the marine area of the Aegean Sea and the terrestrial border-region along eastern Thrace. From that, possible biases of the Hellenic and Turkish LVDs themselves have been drawn and analyzed to determine spatial correlations. Then, the relative offset between the two LVDs was determined employing GPS/Levelling data for both areas and the latest GO-DIR-R5, GO-TIM-R5 and GOCO05s models as well as EGM2008. The estimation of the mean offset was used to provide as well a direct link between the Greek and Turkish LVDs with the IAG conventional value recently proposed as a Wo for a global WHS.

Reflections of the observer and the observed in quantum gravity

NASA Astrophysics Data System (ADS)

Ahluwalia, Dharam Vir

A broad brush impressionistic view of physics from the vantage point of someone living on a nearby dark-planet Zimpok is presented so as to argue that the observed and the observer are reflected in quantum gravity through a universal mass shared by neurones and a unification scale of the high energy physics.

Baryon number and lepton universality violation in leptoquark and diquark models

NASA Astrophysics Data System (ADS)

Assad, Nima; Fornal, Bartosz; Grinstein, Benjamín

2018-02-01

We perform a systematic study of models involving leptoquarks and diquarks with masses well below the grand unification scale and demonstrate that a large class of them is excluded due to rapid proton decay. After singling out the few phenomenologically viable color triplet and sextet scenarios, we show that there exist only two leptoquark models which do not suffer from tree-level proton decay and which have the potential for explaining the recently discovered anomalies in B meson decays. Both of those models, however, contain dimension five operators contributing to proton decay and require a new symmetry forbidding them to emerge at a higher scale. This has a particularly nice realization for the model with the vector leptoquark (3 , 1) 2 / 3, which points to a specific extension of the Standard Model, namely the Pati-Salam unification model, where this leptoquark naturally arises as the new gauge boson. We explore this possibility in light of recent B physics measurements. Finally, we analyze also a vector diquark model, discussing its LHC phenomenology and showing that it has nontrivial predictions for neutron-antineutron oscillation experiments.

Gut Microbiota Dynamics during Dietary Shift in Eastern African Cichlid Fishes

PubMed Central

Baldo, Laura; Riera, Joan Lluís; Tooming-Klunderud, Ave; Albà, M. Mar; Salzburger, Walter

2015-01-01

The gut microbiota structure reflects both a host phylogenetic history and a signature of adaptation to the host ecological, mainly trophic niches. African cichlid fishes, with their array of closely related species that underwent a rapid dietary niche radiation, offer a particularly interesting system to explore the relative contribution of these two factors in nature. Here we surveyed the host intra- and interspecific natural variation of the gut microbiota of five cichlid species from the monophyletic tribe Perissodini of lake Tanganyika, whose members transitioned from being zooplanktivorous to feeding primarily on fish scales. The outgroup riverine species Astatotilapia burtoni, largely omnivorous, was also included in the study. Fusobacteria, Firmicutes and Proteobacteria represented the dominant components in the gut microbiota of all 30 specimens analysed according to two distinct 16S rRNA markers. All members of the Perissodini tribe showed a homogenous pattern of microbial alpha and beta diversities, with no significant qualitative differences, despite changes in diet. The recent diet shift between zooplantkon- and scale-eaters simply reflects on a significant enrichment of Clostridium taxa in scale-eaters where they might be involved in the scale metabolism. Comparison with the omnivorous species A. burtoni suggests that, with increased host phylogenetic distance and/or increasing herbivory, the gut microbiota begins differentiating also at qualitative level. The cichlids show presence of a large conserved core of taxa and a small set of core OTUs (average 13–15%), remarkably stable also in captivity, and putatively favoured by both restricted microbial transmission among related hosts (putatively enhanced by mouthbrooding behavior) and common host constraints. This study sets the basis for a future large-scale investigation of the gut microbiota of cichlids and its adaptation in the process of the host adaptive radiation. PMID:25978452

Inflation at the electroweak scale

NASA Technical Reports Server (NTRS)

Knox, Lloyd; Turner, Michael S.

1993-01-01

We present a model for slow-rollover inflation where the vacuum energy that drives inflation is of the order of G(F) exp -2; unlike most models, the conversion of vacuum energy to radiation ('reheating') is moderately efficient. The scalar field responsible for inflation is a standard-model singlet, develops a vacuum expectation value of 4 x 10 exp 6 GeV, has a mass of about 1 GeV, and can play a role in electroweak phenomena. We also discuss models where the energy scale of inflation is somewhat larger, but still well below the unification scale.

Trinification, the hierarchy problem, and inverse seesaw neutrino masses

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cauet, Christophe; Paes, Heinrich; Wiesenfeldt, Soeren

2011-05-01

In minimal trinification models light neutrino masses can be generated via a radiative seesaw mechanism, where the masses of the right-handed neutrinos originate from loops involving Higgs and fermion fields at the unification scale. This mechanism is absent in models aiming at solving or ameliorating the hierarchy problem, such as low-energy supersymmetry, since the large seesaw scale disappears. In this case, neutrino masses need to be generated via a TeV-scale mechanism. In this paper, we investigate an inverse seesaw mechanism and discuss some phenomenological consequences.

Carbohydrates and the human gut microbiota.

PubMed

Chassard, Christophe; Lacroix, Christophe

2013-07-01

Due to its scale and its important role in maintaining health, the gut microbiota can be considered as a 'new organ' inside the human body. Many complex carbohydrates are degraded and fermented by the human gut microbiota in the large intestine to both yield basic energy salvage and impact gut health through produced metabolites. This review will focus on the gut microbes and microbial mechanisms responsible for polysaccharides degradation and fermentation in the large intestine. Gut microbes and bacterial metabolites impact the host at many levels, including modulation of inflammation, and glucose and lipid metabolisms. A complex relationship occurs in the intestine between the human gut microbiota, diet and the host. Research on carbohydrates and gut microbiota composition and functionality is fast developing and will open opportunities for prevention and treatment of obesity, diabetes and other related metabolic disorders through manipulation of the gut ecosystem.

Multi-component fermionic dark matter and IceCube PeV scale neutrinos in left-right model with gauge unification

NASA Astrophysics Data System (ADS)

Borah, Debasish; Dasgupta, Arnab; Dey, Ujjal Kumar; Patra, Sudhanwa; Tomar, Gaurav

2017-09-01

We consider a simple extension of the minimal left-right symmetric model (LRSM) in order to explain the PeV neutrino events seen at the IceCube experiment from a heavy decaying dark matter. The dark matter sector is composed of two fermions: one at PeV scale and the other at TeV scale such that the heavier one can decay into the lighter one and two neutrinos. The gauge annihilation cross sections of PeV dark matter are not large enough to generate its relic abundance within the observed limit. We include a pair of real scalar triplets Ω L,R which can bring the thermally overproduced PeV dark matter abundance into the observed range through late time decay and consequent entropy release thereby providing a consistent way to obtain the correct relic abundance without violating the unitarity bound on dark matter mass. Another scalar field, a bitriplet under left-right gauge group is added to assist the heavier dark matter decay. The presence of an approximate global U(1) X symmetry can naturally explain the origin of tiny couplings required for long-lived nature of these decaying particles. We also show, how such an extended LRSM can be incorporated within a non-supersymmetric SO(10) model where the gauge coupling unification at a very high scale naturally accommodate a PeV scale intermediate symmetry, required to explain the PeV events at IceCube.

Development of Airborne Astronavigation for UK V-bombers and the Origin of Continuum Theory (CT): Some Personal Notes and Indications for its Future

NASA Astrophysics Data System (ADS)

Osmaston, Miles F.

I trace the historical and scientific origin of Continuum Theory, from its observationally enforced beginning in 1959, in never-to-be-repeated military circumstances, and follow this by a discussion of some of its more recent developments. The presence of this and of several other CT-related contributions to this symposium volume on Unified Field Mechanics can be justified by a view that CT, as currently developing, could, in a very real sense, be given an alternative name `Unified Aether Mechanics'. The substitution of `field' by `aether' reflects Newton's 1692 thesis that `fields' cannot exist per se, a view that persisted for over 200 years; they must have an agent or medium within which they exist and are communicated between objects. Hence the term `aether mechanics' would be appropriate. A principal aim in `unification', moreover, has always been the unification of gravitation into the family of forces. Einstein's response was the meanderings of space-time. CT achieves its unification into the electromagnetic family by its implementation of the Maxwell's equations aether, with insightful results, apparently regardless of scale. Particletied in nature, the existence of such an aether is was effectively demonstrated experimentally by the Michelson-Morley finding of 1887.

GUT models at current and future hadron colliders and implications to dark matter searches

NASA Astrophysics Data System (ADS)

Arcadi, Giorgio; Lindner, Manfred; Mambrini, Yann; Pierre, Mathias; Queiroz, Farinaldo S.

2017-08-01

Grand Unified Theories (GUT) offer an elegant and unified description of electromagnetic, weak and strong interactions at high energy scales. A phenomenological and exciting possibility to grasp GUT is to search for TeV scale observables arising from Abelian groups embedded in GUT constructions. That said, we use dilepton data (ee and μμ) that has been proven to be a golden channel for a wide variety of new phenomena expected in theories beyond the Standard Model to probe GUT-inspired models. Since heavy dilepton resonances feature high signal selection efficiencies and relatively well-understood backgrounds, stringent and reliable bounds can be placed on the mass of the Z‧ gauge boson arising in such theories. In this work, we obtain 95% C.L. limits on the Z‧ mass for several GUT-models using current and future proton-proton colliders with √{ s} = 13 TeV , 33 TeV ,and 100 TeV, and put them into perspective with dark matter searches in light of the next generation of direct detection experiments.

Investigating the properties of low-mass AGN and their connection to unification models

NASA Astrophysics Data System (ADS)

Hood, Carol Elizabeth

The most basic model of active galactic nuclei (AGN) suggest the observational differences between Type 1 and Type 2 objects are solely due to the orientation angle of the object. Although there are still some unanswered questions about the structures surrounding the central engines of the AGN, such as if the obscuring region is due to a dusty torus or an outflowing wind, observations (e.g. the detections of broad lines in the polarized light of some Type 2 objects) have proved consistent with predictions and continue to strengthen the case for unification. However, many are still searching for "true" Type 2 objects. These objects optically look like other Type 2 objects, but instead of having their broad line region blocked from the line-of-sight by the obscuring region, they are believed to lack the broad line region altogether. Others have predicted that at low luminosity or low accretion rate, the broad line region will disappear, leaving all objects to optically look like Type 2 objects, despite their level of intrinsic absorption. Low-mass (< 10^6 solar masses) AGN provide interesting environments in which these unification models can be studied. We present an in-depth multi-wavelength study of one of the prototypical low-mass AGN, POX 52, investigating the properties of the central engine along with that of the host galaxy. In addition, we examine the X-ray properties of a sample of Type 2 objects observed with XMM-Newton and the IR properties of a sample of both Type 1 and 2 objects observed with the Spitzer Infrared Spectrograph, in order to study the absorption properties of these objects and test the validity of unification models in the low-mass regime. We find little to no evidence of any "true" Type 2 objects in any of our samples, and show that in all tests preformed, low-mass AGN appear to simply be scaled-down versions of their more massive counterparts, keeping current unification models intact down to the lowest black hole masses probed to date.

77 FR 3787 - Notice of Submission of Proposed Information Collection to OMB; Family Unification Program (FUP)

Federal Register 2010, 2011, 2012, 2013, 2014

2012-01-25

... Proposed Information Collection to OMB; Family Unification Program (FUP) AGENCY: Office of the Chief... Paperwork Reduction Act. The Department is soliciting public comments on the subject proposal. Application for the Family Unification Program: Makes Housing Choice Vouchers available to eligible families to...

76 FR 11505 - Notice of Submission of Proposed Information Collection to OMB Family Unification Program (FUP)

Federal Register 2010, 2011, 2012, 2013, 2014

2011-03-02

... Proposed Information Collection to OMB Family Unification Program (FUP) AGENCY: Office of the Chief... Paperwork Reduction Act. The Department is soliciting public comments on the subject proposal. Application for the Family Unification Program: Makes Housing Choice Vouchers available to eligible families to...

77 FR 26565 - Notice of Submission of Proposed Information Collection to OMB Housing for Youth Aging Out of...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-04

.... This information collection will support research on the role of Family Unification Program vouchers in... Use: This information collection will support research on the role of Family Unification Program... agencies (PHA) that have an allotment of Family Unification program vouchers (n=300) to determine whether...

Unification of gauge and Yukawa couplings

NASA Astrophysics Data System (ADS)

Abdalgabar, Ammar; Khojali, Mohammed Omer; Cornell, Alan S.; Cacciapaglia, Giacomo; Deandrea, Aldo

2018-01-01

The unification of gauge and top Yukawa couplings is an attractive feature of gauge-Higgs unification models in extra-dimensions. This feature is usually considered difficult to obtain based on simple group theory analyses. We reconsider a minimal toy model including the renormalisation group running at one loop. Our results show that the gauge couplings unify asymptotically at high energies, and that this may result from the presence of an UV fixed point. The Yukawa coupling in our toy model is enhanced at low energies, showing that a genuine unification of gauge and Yukawa couplings may be achieved.

A model of comprehensive unification

NASA Astrophysics Data System (ADS)

Reig, Mario; Valle, José W. F.; Vaquera-Araujo, C. A.; Wilczek, Frank

2017-11-01

Comprehensive - that is, gauge and family - unification using spinors has many attractive features, but it has been challenged to explain chirality. Here, by combining an orbifold construction with more traditional ideas, we address that difficulty. Our candidate model features three chiral families and leads to an acceptable result for quantitative unification of couplings. A potential target for accelerator and astronomical searches emerges.

Human gut microbiota and healthy aging: Recent developments and future prospective.

PubMed

Kumar, Manish; Babaei, Parizad; Ji, Boyang; Nielsen, Jens

2016-10-27

The human gut microbiota alters with the aging process. In the first 2-3 years of life, the gut microbiota varies extensively in composition and metabolic functions. After this period, the gut microbiota demonstrates adult-like more stable and diverse microbial species. However, at old age, deterioration of physiological functions of the human body enforces the decrement in count of beneficial species (e.g. Bifidobacteria ) in the gut microbiota, which promotes various gut-related diseases (e.g. inflammatory bowel disease). Use of plant-based diets and probiotics/prebiotics may elevate the abundance of beneficial species and prevent gut-related diseases. Still, the connections between diet, microbes, and host are only partially known. To this end, genome-scale metabolic modeling can help to explore these connections as well as to expand the understanding of the metabolic capability of each species in the gut microbiota. This systems biology approach can also predict metabolic variations in the gut microbiota during ageing, and hereby help to design more effective probiotics/prebiotics.

Human gut microbiota and healthy aging: Recent developments and future prospective

PubMed Central

Kumar, Manish; Babaei, Parizad; Ji, Boyang; Nielsen, Jens

2016-01-01

The human gut microbiota alters with the aging process. In the first 2-3 years of life, the gut microbiota varies extensively in composition and metabolic functions. After this period, the gut microbiota demonstrates adult-like more stable and diverse microbial species. However, at old age, deterioration of physiological functions of the human body enforces the decrement in count of beneficial species (e.g. Bifidobacteria) in the gut microbiota, which promotes various gut-related diseases (e.g. inflammatory bowel disease). Use of plant-based diets and probiotics/prebiotics may elevate the abundance of beneficial species and prevent gut-related diseases. Still, the connections between diet, microbes, and host are only partially known. To this end, genome-scale metabolic modeling can help to explore these connections as well as to expand the understanding of the metabolic capability of each species in the gut microbiota. This systems biology approach can also predict metabolic variations in the gut microbiota during ageing, and hereby help to design more effective probiotics/prebiotics. PMID:28035338

Predictions from a flavour GUT model combined with a SUSY breaking sector

NASA Astrophysics Data System (ADS)

Antusch, Stefan; Hohl, Christian

2017-10-01

We discuss how flavour GUT models in the context of supergravity can be completed with a simple SUSY breaking sector, such that the flavour-dependent (non-universal) soft breaking terms can be calculated. As an example, we discuss a model based on an SU(5) GUT symmetry and A 4 family symmetry, plus additional discrete "shaping symmetries" and a ℤ 4 R symmetry. We calculate the soft terms and identify the relevant high scale input parameters, and investigate the resulting predictions for the low scale observables, such as flavour violating processes, the sparticle spectrum and the dark matter relic density.

Farnesoid X Receptor Signaling Shapes the Gut Microbiota and Controls Hepatic Lipid Metabolism.

PubMed

Zhang, Limin; Xie, Cen; Nichols, Robert G; Chan, Siu H J; Jiang, Changtao; Hao, Ruixin; Smith, Philip B; Cai, Jingwei; Simons, Margaret N; Hatzakis, Emmanuel; Maranas, Costas D; Gonzalez, Frank J; Patterson, Andrew D

2016-01-01

The gut microbiota modulates obesity and associated metabolic phenotypes in part through intestinal farnesoid X receptor (FXR) signaling. Glycine-β-muricholic acid (Gly-MCA), an intestinal FXR antagonist, has been reported to prevent or reverse high-fat diet (HFD)-induced and genetic obesity, insulin resistance, and fatty liver; however, the mechanism by which these phenotypes are improved is not fully understood. The current study investigated the influence of FXR activity on the gut microbiota community structure and function and its impact on hepatic lipid metabolism. Predictions about the metabolic contribution of the gut microbiota to the host were made using 16S rRNA-based PICRUSt ( p hylogenetic i nvestigation of c ommunities by r econstruction of u nobserved st ates), then validated using 1 H nuclear magnetic resonance-based metabolomics, and results were summarized by using genome-scale metabolic models. Oral Gly-MCA administration altered the gut microbial community structure, notably reducing the ratio of Firmicutes to Bacteroidetes and its PICRUSt-predicted metabolic function, including reduced production of short-chain fatty acids (substrates for hepatic gluconeogenesis and de novo lipogenesis) in the ceca of HFD-fed mice. Metabolic improvement was intestinal FXR dependent, as revealed by the lack of changes in HFD-fed intestine-specific Fxr -null ( Fxr ΔIE ) mice treated with Gly-MCA. Integrative analyses based on genome-scale metabolic models demonstrated an important link between Lactobacillus and Clostridia bile salt hydrolase activity and bacterial fermentation. Hepatic metabolite levels after Gly-MCA treatment correlated with altered levels of gut bacterial species. In conclusion, modulation of the gut microbiota by inhibition of intestinal FXR signaling alters host liver lipid metabolism and improves obesity-related metabolic dysfunction. IMPORTANCE The farnesoid X receptor (FXR) plays an important role in mediating the dialog between the host and gut microbiota, particularly through modulation of enterohepatic circulation of bile acids. Mounting evidence suggests that genetic ablation of Fxr in the gut or gut-restricted chemical antagonism of the FXR promotes beneficial health effects, including the prevention of nonalcoholic fatty liver disease in rodent models. However, questions remain unanswered, including whether modulation of FXR activity plays a role in shaping the gut microbiota community structure and function and what metabolic pathways of the gut microbiota contribute in an FXR-dependent manner to the host phenotype. In this report, new insights are gained into the metabolic contribution of the gut microbiota to the metabolic phenotypes, including establishing a link between FXR antagonism, bacterial bile salt hydrolase activity, and fermentation. Multiple approaches, including unique mouse models as well as metabolomics and genome-scale metabolic models, were employed to confirm these results.

Farnesoid X Receptor Signaling Shapes the Gut Microbiota and Controls Hepatic Lipid Metabolism

PubMed Central

Zhang, Limin; Xie, Cen; Nichols, Robert G.; Chan, Siu H. J.; Jiang, Changtao; Hao, Ruixin; Smith, Philip B.; Cai, Jingwei; Simons, Margaret N.; Hatzakis, Emmanuel; Maranas, Costas D.; Gonzalez, Frank J.

2016-01-01

ABSTRACT The gut microbiota modulates obesity and associated metabolic phenotypes in part through intestinal farnesoid X receptor (FXR) signaling. Glycine-β-muricholic acid (Gly-MCA), an intestinal FXR antagonist, has been reported to prevent or reverse high-fat diet (HFD)-induced and genetic obesity, insulin resistance, and fatty liver; however, the mechanism by which these phenotypes are improved is not fully understood. The current study investigated the influence of FXR activity on the gut microbiota community structure and function and its impact on hepatic lipid metabolism. Predictions about the metabolic contribution of the gut microbiota to the host were made using 16S rRNA-based PICRUSt (phylogenetic investigation of communities by reconstruction of unobserved states), then validated using 1H nuclear magnetic resonance-based metabolomics, and results were summarized by using genome-scale metabolic models. Oral Gly-MCA administration altered the gut microbial community structure, notably reducing the ratio of Firmicutes to Bacteroidetes and its PICRUSt-predicted metabolic function, including reduced production of short-chain fatty acids (substrates for hepatic gluconeogenesis and de novo lipogenesis) in the ceca of HFD-fed mice. Metabolic improvement was intestinal FXR dependent, as revealed by the lack of changes in HFD-fed intestine-specific Fxr-null (FxrΔIE) mice treated with Gly-MCA. Integrative analyses based on genome-scale metabolic models demonstrated an important link between Lactobacillus and Clostridia bile salt hydrolase activity and bacterial fermentation. Hepatic metabolite levels after Gly-MCA treatment correlated with altered levels of gut bacterial species. In conclusion, modulation of the gut microbiota by inhibition of intestinal FXR signaling alters host liver lipid metabolism and improves obesity-related metabolic dysfunction. IMPORTANCE The farnesoid X receptor (FXR) plays an important role in mediating the dialog between the host and gut microbiota, particularly through modulation of enterohepatic circulation of bile acids. Mounting evidence suggests that genetic ablation of Fxr in the gut or gut-restricted chemical antagonism of the FXR promotes beneficial health effects, including the prevention of nonalcoholic fatty liver disease in rodent models. However, questions remain unanswered, including whether modulation of FXR activity plays a role in shaping the gut microbiota community structure and function and what metabolic pathways of the gut microbiota contribute in an FXR-dependent manner to the host phenotype. In this report, new insights are gained into the metabolic contribution of the gut microbiota to the metabolic phenotypes, including establishing a link between FXR antagonism, bacterial bile salt hydrolase activity, and fermentation. Multiple approaches, including unique mouse models as well as metabolomics and genome-scale metabolic models, were employed to confirm these results. PMID:27822554

Germany Since Unification. Workshop Leader's Manual. An Introduction to Social Studies Instructional Resource Materials for Teaching about Germany Since Unification.

ERIC Educational Resources Information Center

Blankenship, Glen

This manual is designed to offer support for the instructional resources guides on "Germany since Unification." It provides the basis for a full-day inservice training session on the use of those materials. The format can be modified to meet the needs of leaders, audiences, and time frames. Using the materials developed by teachers and…

Preservation of three-dimensional spatial structure in the gut microbiome.

PubMed

Hasegawa, Yuko; Mark Welch, Jessica L; Rossetti, Blair J; Borisy, Gary G

2017-01-01

Preservation of three-dimensional structure in the gut is necessary in order to analyze the spatial organization of the gut microbiota and gut luminal contents. In this study, we evaluated preparation methods for mouse gut with the goal of preserving micron-scale spatial structure while performing fluorescence imaging assays. Our evaluation of embedding methods showed that commonly used media such as Tissue-Tek Optimal Cutting Temperature (OCT) compound, paraffin, and polyester waxes resulted in redistribution of luminal contents. By contrast, a hydrophilic methacrylate resin, Technovit H8100, preserved three-dimensional organization. Our mouse intestinal preparation protocol optimized using the Technovit H8100 embedding method was compatible with microbial fluorescence in situ hybridization (FISH) and other labeling techniques, including immunostaining and staining with both wheat germ agglutinin (WGA) and 4', 6-diamidino-2-phenylindole (DAPI). Mucus could be visualized whether the sample was fixed with paraformaldehyde (PFA) or with Carnoy's fixative. The protocol optimized in this study enabled simultaneous visualization of micron-scale spatial patterns formed by microbial cells in the mouse intestines along with biogeographical landmarks such as host-derived mucus and food particles.

Gut metabolome meets microbiome: A methodological perspective to understand the relationship between host and microbe.

PubMed

Lamichhane, Santosh; Sen, Partho; Dickens, Alex M; Orešič, Matej; Bertram, Hanne Christine

2018-04-30

It is well established that gut microbes and their metabolic products regulate host metabolism. The interactions between the host and its gut microbiota are highly dynamic and complex. In this review we present and discuss the metabolomic strategies to study the gut microbial ecosystem. We highlight the metabolic profiling approaches to study faecal samples aimed at deciphering the metabolic product derived from gut microbiota. We also discuss how metabolomics data can be integrated with metagenomics data derived from gut microbiota and how such approaches may lead to better understanding of the microbial functions. Finally, the emerging approaches of genome-scale metabolic modelling to study microbial co-metabolism and host-microbe interactions are highlighted. Copyright © 2018 Elsevier Inc. All rights reserved.

Gut microbiomes of mobile predators vary with landscape context and species identity.

PubMed

Tiede, Julia; Scherber, Christoph; Mutschler, James; McMahon, Katherine D; Gratton, Claudio

2017-10-01

Landscape context affects predator-prey interactions and predator diet composition, yet little is known about landscape effects on insect gut microbiomes, a determinant of physiology and condition. Here, we combine laboratory and field experiments to examine the effects of landscape context on the gut bacterial community and body condition of predatory insects. Under laboratory conditions, we found that prey diversity increased bacterial richness in insect guts. In the field, we studied the performance and gut microbiota of six predatory insect species along a landscape complexity gradient in two local habitat types (soybean fields vs. prairie). Insects from soy fields had richer gut bacteria and lower fat content than those from prairies, suggesting better feeding conditions in prairies. Species origin mediated landscape context effects, suggesting differences in foraging of exotic and native predators on a landscape scale. Overall, our study highlights complex interactions among gut microbiota, predator identity, and landscape context.

Frozen up dilaton and the GUT/Planck mass ratio

NASA Astrophysics Data System (ADS)

Davidson, Aharon; Ygael, Tomer

2017-09-01

By treating modulus and phase on equal footing, as prescribed by Dirac, local scale invariance can consistently accompany any Brans-Dicke ω-theory. We show that in the presence of a soft scale symmetry breaking term, the classical solution, if it exists, cannot be anything else but general relativistic. The dilaton modulus gets frozen up by the Weyl-Proca vector field, thereby constituting a gravitational quasi-Higgs mechanism. Assigning all grand unified scalars as dilatons, they enjoy Weyl universality, and upon symmetry breaking, the Planck (mass)2 becomes the sum of all their individual (VEV)2s. The emerging GUT/Planck (mass)2 ratio is thus ∼ ωgGUT2 / 4 π.

Reconstruction scenario in modified Horava-Lifshitz F( R) gravity with well-known scale factors

NASA Astrophysics Data System (ADS)

Jawad, Abdul; Rani, Shamaila

2015-05-01

In this paper, we analyze the behavior of pilgrim dark energy with G-O cutoff scale in modified Horava-Lifshitz F( R) gravity through correspondence scenario. We consider three well-known scale factors in which one scale factor describes the unification of matter dominated and accelerated phases and others are intermediate and bouncing forms. We obtain the models for these scale factors and obtain increasing behavior with the passage of time. We also extract equation of state parameter corresponding to these models. We observe that this parameter shows transition from phantom towards quintessence by crossing the phantom divide line in all cases. We also give comparison of our results of equation of state parameter with observational constraints.

The role of the S 3 GUT leptoquark in flavor universality and collider searches

NASA Astrophysics Data System (ADS)

Doršner, Ilja; Fajfer, Svjetlana; Faroughy, Darius A.; Košnik, Nejc

2017-10-01

We investigate the ability of the S 3 scalar leptoquark to address the recent hints of lepton universality violation in B meson decays. The S 3 leptoquark with quantum numbers (\\overline{3},3,1/3) naturally emerges in the context of an SU(5) GUT model without any conflict with the stringent limits from observed nucleon stability. Scalar leptoquark S 3 with left-handed couplings to 2nd and 3rd generations of charged leptons and down-type quarks seems well-suited to address both R K(∗) and R D(∗) . We quantify this suitability with numerical fits to a plethora of relevant flavor observables. The proposed SU(5) model calls for a second leptoquark state, i.e., \\tilde{R}_2 with quantum numbers ( 3 , 2 , 1 /6), if one is to generate gauge coupling unification and neutrino mass. We accordingly include it in our study to investigate \\tilde{R}_2 's ability to offset adverse effects of S 3 and thus improve a quality of numerical fits. A global fit of the leptoquark Yukawa couplings shows that large couplings of light S 3 to τ leptons are preferred. We furthermore identify B\\to {K}^{(\\ast )}\\overline{ν}ν as the most sensitive channel to probe the preferred region of parameter space. Large couplings of S 3 to τ leptons are finally confronted with the experimental searches for τ final states at the Large Hadron Collider. These searches comprise a study of decay products of the leptoquark pair production, as well as, and more importantly, an analysis of the high-mass ττ finalstates.

Le Chatelier's Principle in Sensation and Perception: Fractal-Like Enfolding at Different Scales

PubMed Central

Norwich, Kenneth H.

2010-01-01

Le Chatelier's principle asserts that a disturbance, when applied to a resting system may drive the system away from its equilibrium state, but will invoke a countervailing influence that will counteract the effect of the disturbance. When applied to the field of sensation and perception, a generalized stimulus will displace the system from equilibrium, and a generalized adaptation process will serve as the countervailing influence tending to reduce the impact of the stimulus. The principle applies at all levels, from the behavioral to the neural, the larger enfolding the smaller in fractal-like form. Le Chatelier's principle, so applied, leads to the unification of many concepts in sensory science. Ideas as diverse as sensory adaptation, reflex arcs, and simple deductive logic can be brought under the umbrella of a single orienting principle. Beyond unification, this principle allows us to approach many questions in pathophysiology from a different perspective. For example, we find new direction toward the reduction of phantom-limb pain and possibly of vertigo. PMID:21423359

Physics through the 1990s: Elementary-particle physics

NASA Astrophysics Data System (ADS)

The volume begins with a non-mathematical discussion of the motivation behind, and basic ideas of, elementary-particle physics theory and experiment. The progress over the past two decades with the quark model and unification of the electromagnetic and weak interactions is reviewed. Existing theoretical problems in the field, such as the origin of mass and the unification of the fundamental forces, are detailed, along with experimental programs to test the new theories. Accelerators, instrumentation, and detectors are described for both current and future facilities. Interactions with other areas of both theoretical and applied physics are presented. The sociology of the field is examined regarding the education of graduate students, the organization necessary in large-scale experiments, and the decision-making process involved in high-cost experiments. Finally, conclusions and recommendations for maintaining US excellence in theory and experiment are given. Appendices list both current and planned accelerators, and present statistical data on the US elementary-particle physics program. A glossary is included.

Physics through the 1990s: elementary-particle physics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1986-01-01

The volume begins with a non-mathematical discussion of the motivation behind, and basic ideas of, elementary-particle physics theory and experiment. The progress over the past two decades with the quark model and unification of the electromagnetic and weak interactions is reviewed. Existing theoretical problems in the field, such as the origin of mass and the unification of the fundamental forces, are detailed, along with experimental programs to test the new theories. Accelerators, instrumentation, and detectors are described for both current and future facilities. Interactions with other areas of both theoretical and applied physics are presented. The sociology of the fieldmore » is examined regarding the education of graduate students, the organization necessary in large-scale experiments, and the decision-making process involved in high-cost experiments. Finally, conclusions and recommendations for maintaining US excellence in theory and experiment are given. Appendices list both current and planned accelerators, and present statistical data on the US elementary-particle physics program. A glossary is included.« less

Symmetry Breaking, Unification, and Theories Beyond the Standard Model

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nomura, Yasunori

2009-07-31

A model was constructed in which the supersymmetric fine-tuning problem is solved without extending the Higgs sector at the weak scale. We have demonstrated that the model can avoid all the phenomenological constraints, while avoiding excessive fine-tuning. We have also studied implications of the model on dark matter physics and collider physics. I have proposed in an extremely simple construction for models of gauge mediation. We found that the {mu} problem can be simply and elegantly solved in a class of models where the Higgs fields couple directly to the supersymmetry breaking sector. We proposed a new way of addressingmore » the flavor problem of supersymmetric theories. We have proposed a new framework of constructing theories of grand unification. We constructed a simple and elegant model of dark matter which explains excess flux of electrons/positrons. We constructed a model of dark energy in which evolving quintessence-type dark energy is naturally obtained. We studied if we can find evidence of the multiverse.« less

Physics through the 1990s: Elementary-particle physics

NASA Technical Reports Server (NTRS)

1986-01-01

The volume begins with a non-mathematical discussion of the motivation behind, and basic ideas of, elementary-particle physics theory and experiment. The progress over the past two decades with the quark model and unification of the electromagnetic and weak interactions is reviewed. Existing theoretical problems in the field, such as the origin of mass and the unification of the fundamental forces, are detailed, along with experimental programs to test the new theories. Accelerators, instrumentation, and detectors are described for both current and future facilities. Interactions with other areas of both theoretical and applied physics are presented. The sociology of the field is examined regarding the education of graduate students, the organization necessary in large-scale experiments, and the decision-making process involved in high-cost experiments. Finally, conclusions and recommendations for maintaining US excellence in theory and experiment are given. Appendices list both current and planned accelerators, and present statistical data on the US elementary-particle physics program. A glossary is included.

125 GeV Higgs boson mass from 5D gauge-Higgs unification

NASA Astrophysics Data System (ADS)

Carson, Jason; Okada, Nobuchika

2018-03-01

In the context of a simple gauge-Higgs unification (GHU) scenario based on the gauge group SU(3)×U(1)^' in a 5D flat space-time, we investigate the possibility of reproducing the observed Higgs boson mass of around 125 GeV. We introduce bulk fermion multiplets with a bulk mass and a (half-)periodic boundary condition. In our analysis, we adopt a low-energy effective theoretical approach of the GHU scenario, where the running Higgs quartic coupling is required to vanish at the compactification scale. Under this "gauge-Higgs condition," we investigate the renormalization group evolution of the Higgs quartic coupling and find a relation between the bulk mass and the compactification scale so as to reproduce the 125 GeV Higgs boson mass. Through quantum corrections at the one-loop level, the bulk fermions contribute to the Higgs boson production and decay processes and deviate the Higgs boson signal strengths at the Large Hadron Collider experiments from the Standard Model (SM) predictions. Employing the current experimental data that show that the Higgs boson signal strengths for a variety of Higgs decay modes are consistent with the SM predictions, we obtain lower mass bounds on the lightest mode of the bulk fermions to be around 1 TeV.

Using experimental data to test and improve SUSY theories

NASA Astrophysics Data System (ADS)

Wang, Ting

There are several pieces of evidence that our world is described by a supersymmetric extension of the Standard Model. In this thesis, I assume this is the case and study how to use experimental data to test and improve supersymmetric standard models. Several experimental signatures and their implications are covered in this thesis: the result of the branching ratio of b → sgamma is used to put constraints on SUSY models; the measured time-dependent CP asymmetry in the B → φKS process is used to test unification scale models; the excess of positrons from cosmic rays helps us to test the property of the Lightest Supersymmetric Particle and the Cold Dark Matter production mechanisms; the LEP higgs search results are used to classify SUSY models; SUSY signatures at the Tevatron are used to distinguish different unification scale models; by considering the mu problem, SUSY theories are improved. Due to the large unknown parameter space, all of the above inputs should be used to partially reconstruct the soft Lagrangian, which is the central part of the model. Combining the results from these analysis, a significant amount of knowledge about the underlying theory has been learned. In the next several years, there will be more data coming. The methods and results in this thesis will be useful for dealing with future data.

Potential Beneficial Effects of Probiotics on Human Migraine Headache: A Literature Review.

PubMed

Dai, Yu-Jie; Wang, Hai-Yan; Wang, Xi-Jian; Kaye, Alan D; Sun, Yong-Hai

2017-02-01

Recent studies have shown that migraine headache is often associated with concomitant gastrointestinal diseases. There is a higher prevalence of headaches in patients with gastrointestinal disorders. These associations between migraine and gastrointestinal disorders suggest a potential link to a bidirectional modulation of gut microbiota and brain function. The underlying working mechanistic links between migraine and gastrointestinal diseases may include increased intestinal epithelial permeability and inflammation. This review presents an overview of the relationship between gut microbiota and brain function, especially with regard to migraine headache. Literature review. Anesthesia and Operation Center, Department of Anesthesiology, Chinese PLA General Hospital. The present investigation included a PubMed search using the following terms: migraine headache, gut microbiota, brain function, and probiotics. In this literature review, we mainly discussed the relationship between gut microbiota and brain function, especially with regard to migraine headache. The potential effects of probiotics supplement on migraine headache were also included. There is limited evidence from clinical studies of the positive effects of probiotics in patients with migraine headache. Large-scale randomized, placebo-controlled clinical trials are warranted to evaluate the clinical efficacy and safety of probiotics in patients with migraine headache. Similar to migraine headache, disorders of the brain involving depression and anxiety have been demonstrated to be associated with increased gut permeability. An improvement in gut microbiota and reduction of inflammation can have positive effects on strengthening gut and brain function. Moreover, it can be inferred that probiotics may have a beneficial effect on the frequency and severity of migraine headache attacks. Large-scale randomized, placebo-controlled studies are warranted in the future to evaluate the clinical efficacy and safety of probiotics in patients with migraine headache.Key words: Migraine headache, gut microbiota, brain function, probiotics.

Exploring a Variable-Resolution Approach for Simulating Regional Climate in the Rocky Mountain Region Using the VR-CESM

NASA Astrophysics Data System (ADS)

Wu, Chenglai; Liu, Xiaohong; Lin, Zhaohui; Rhoades, Alan M.; Ullrich, Paul A.; Zarzycki, Colin M.; Lu, Zheng; Rahimi-Esfarjani, Stefan R.

2017-10-01

The reliability of climate simulations and projections, particularly in the regions with complex terrains, is greatly limited by the model resolution. In this study we evaluate the variable-resolution Community Earth System Model (VR-CESM) with a high-resolution (0.125°) refinement over the Rocky Mountain region. The VR-CESM results are compared with observations, as well as CESM simulation at a quasi-uniform 1° resolution (UNIF) and Canadian Regional Climate Model version 5 (CRCM5) simulation at a 0.11° resolution. We find that VR-CESM is effective at capturing the observed spatial patterns of temperature, precipitation, and snowpack in the Rocky Mountains with the performance comparable to CRCM5, while UNIF is unable to do so. VR-CESM and CRCM5 simulate better the seasonal variations of precipitation than UNIF, although VR-CESM still overestimates winter precipitation whereas CRCM5 and UNIF underestimate it. All simulations distribute more winter precipitation along the windward (west) flanks of mountain ridges with the greatest overestimation in VR-CESM. VR-CESM simulates much greater snow water equivalent peaks than CRCM5 and UNIF, although the peaks are still 10-40% less than observations. Moreover, the frequency of heavy precipitation events (daily precipitation ≥ 25 mm) in VR-CESM and CRCM5 is comparable to observations, whereas the same events in UNIF are an order of magnitude less frequent. In addition, VR-CESM captures the observed occurrence frequency and seasonal variation of rain-on-snow days and performs better than UNIF and CRCM5. These results demonstrate the VR-CESM's capability in regional climate modeling over the mountainous regions and its promising applications for climate change studies.

Gut Microbes and the Brain: Paradigm Shift in Neuroscience

PubMed Central

Knight, Rob; Mazmanian, Sarkis K.; Cryan, John F.; Tillisch, Kirsten

2014-01-01

The discovery of the size and complexity of the human microbiome has resulted in an ongoing reevaluation of many concepts of health and disease, including diseases affecting the CNS. A growing body of preclinical literature has demonstrated bidirectional signaling between the brain and the gut microbiome, involving multiple neurocrine and endocrine signaling mechanisms. While psychological and physical stressors can affect the composition and metabolic activity of the gut microbiota, experimental changes to the gut microbiome can affect emotional behavior and related brain systems. These findings have resulted in speculation that alterations in the gut microbiome may play a pathophysiological role in human brain diseases, including autism spectrum disorder, anxiety, depression, and chronic pain. Ongoing large-scale population-based studies of the gut microbiome and brain imaging studies looking at the effect of gut microbiome modulation on brain responses to emotion-related stimuli are seeking to validate these speculations. This article is a summary of emerging topics covered in a symposium and is not meant to be a comprehensive review of the subject. PMID:25392516

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pati, Jogesh C.

As a tribute to Abdus Salam, I recall the initiation in 1972-73 of the idea of grand unification based on the view that lepton number is the fourth color. Motivated by aesthetic demands, these attempts led to the suggestion that the existing SU (2) x U (1) symmetry be extended minimally to the quark-lepton and left-right symmetric non-Abelian gauge structure G (2,2,4) = SU (2) L x SU (2) R x SU (4)-color. This served to unify members of a family within a single L-R self-conjugate multiplet. It also explained: the quantization of electric charge, the co-existence of quarks andmore » leptons, and that of their three basic forces $-$ weak, electromagnetic, and strong $-$ while providing the appealing possibility that nature is fundamentally left-right symmetric (parity-conserving). The minimal extension of the symmetry G (2,2,4) to a simple group is given by the attractive symmetry SO (10) that came a year later. The advantages of the core symmetry G (2,2,4), including those listed above (which are of course retained by SO (10) as well), are noted. These include the introductions of: (i) the right-handed neutrino as a compelling member of each family, (ii) (B-L) as a local symmetry, and (iii) the mass relation m (ν τ) Dirac = m top (M GUT). These three features, all arising due to SU(4)-color, as well as the gauge coupling uni cation scale (identi ed with the (B-L)- breaking scale), are crucially needed to understand the tiny mass-scales of the neutrino oscillations within the seesaw mechanism, and to implement successfully the mechanism of baryogenesis via leptogenesis. Implications of a well-motivated class of models based on supersymmetric SO(10) or a string-unified G(2, 2, 4) symmetry in 4D for (a) gauge coupling uni cation, (b) fermion masses and mixings, (c) neutrino osillations, (d) baryogenesis via leptogenesis, and last but not least (e) proton decay are presented. Recent works on the latter providing upper limits on proton lifetimes suggest that the potential for discovery of proton decay in the next-generation detectors would be high.« less

Neutrino mixing in SO(10) GUTs with a non-Abelian flavor symmetry in the hidden sector

NASA Astrophysics Data System (ADS)

Smirnov, Alexei Yu.; Xu, Xun-Jie

2018-05-01

The relation between the mixing matrices of leptons and quarks, UPMNS≈VCKM†U0 , where U0 is a matrix of special forms [e.g., bimaximal (BM) and tribimaximal], can be a clue for understanding the lepton mixing and neutrino masses. It may imply the grand unification and the existence of a hidden sector with certain symmetry that generates U0 and leads to the smallness of neutrino masses. We apply the residual symmetry approach to obtain U0. The residual symmetries of both the visible and hidden sectors are Z2×Z2 . Their embedding in a unified flavor group is considered. We find that there are only several possible structures of U0, including the BM mixing and matrices with elements determined by the golden ratio. Realization of the BM scenario based on the SO(10) grand unified theory with the S4 flavor group is presented. Generic features of this scenario are discussed, in particular, the prediction of C P phase 14 4 ° ≲δCP≲21 0 ° in the minimal version.

Five-dimensional Yang-Mills-Einstein supergravity on orbifold spacetimes: From phenomenology to M -theory

NASA Astrophysics Data System (ADS)

McReynolds, Sean

Five-dimensional N = 2 Yang-Mills-Einstein supergravity and its couplings to hyper and tensor multiplets are considered on an orbifold spacetime of the form M4 x S1/Gamma, where Gamma is a discrete group. As is well known in such cases, supersymmetry is broken to N = 1 on the orbifold fixed planes, and chiral 4D theories can be obtained from bulk hypermultiplets (or from the coupling of fixed-plane supported fields). Five-dimensional gauge symmetries are broken by boundary conditions for the fields, which are equivalent to some set of Gamma-parity assignments in the orbifold theory, allowing for arbitrary rank reduction. Furthermore, Wilson lines looping from one boundary to the other can break bulk gauge groups, or give rise to vacuum expectation values for scalars on the boundaries, which can result in spontaneous breaking of boundary gauge groups. The broken gauge symmetries do not survive as global symmetries of the low energy theories below the compactification scale due to 4 D minimal couplings to gauge fields. Axionic fields are a generic feature, just as in any compactification of M-theory (or string theory for that matter), and we exhibit the form of this field and its role as the QCD axion, capable of resolving the strong CP problem. The main motivation for the orbifold theories here is taken to be orbifold-GUTS, wherein a unified gauge group is sought in higher dimensions while allowing the orbifold reduction to handle problems such as rapid proton decay, exotic matter, mass hierarchies, etc. To that end, we discuss the allowable minimal SU(5), SO(10) and E6 GUT theories with all fields living in five dimensions. It is argued that, within the class of homogeneous quaternionic scalar manifolds characterizing the hypermultiplet couplings in 5D, supergravity admits a restricted set of theories that yield minimal phenomenological field content. In addition, non-compact gaugings are a novel feature of supergravity theories, and in particular we consider the example of an SU(5,1) YMESGT in which all of the fields of the theory are connected by local (susy and gauge) transformations that are symmetries of the Lagrangian. Such non-compact gaugings allow a novel type of gauge-Higgs unification in higher dimensions. The possibility of boundary-localized fields is considered only via anomaly arguments. (Abstract shortened by UMI.)

Unification of small and large time scales for biological evolution: deviations from power law.

PubMed

Chowdhury, Debashish; Stauffer, Dietrich; Kunwar, Ambarish

2003-02-14

We develop a unified model that describes both "micro" and "macro" evolutions within a single theoretical framework. The ecosystem is described as a dynamic network; the population dynamics at each node of this network describes the "microevolution" over ecological time scales (i.e., birth, ageing, and natural death of individual organisms), while the appearance of new nodes, the slow changes of the links, and the disappearance of existing nodes accounts for the "macroevolution" over geological time scales (i.e., the origination, evolution, and extinction of species). In contrast to several earlier claims in the literature, we observe strong deviations from power law in the regime of long lifetimes.

What Quasars Really Look Like: Unification of the Emission and Absorption Line Regions

NASA Technical Reports Server (NTRS)

Elvis, Martin

2000-01-01

We propose a simple unifying structure for the inner regions of quasars and AGN. This empirically derived model links together the broad absorption line (BALS), the narrow UV/X-ray ionized absorbers, the BELR, and the 5 Compton scattering/fluorescing regions into a single structure. The model also suggests an alternative origin for the large-scale bi-conical outflows. Some other potential implications of this structure are discussed.

Model of flavor unity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, J.E.

1980-12-15

An SU(7) model is presented toward a flavor unification for known particles. The t quark is not a partner of the b quark. There are three types of neutrinos and several: so far unobserved: light detectable particles (masses <300 GeV): a doubly charged lepton T/sup - -/, a Q=-4/3 quark x, and a Q=5/3 quark y. An intermediate mass scale is a necessity and there is no problem of magnetic monopoles.

Comment on "SU(5) octet scalar at the LHC"

NASA Astrophysics Data System (ADS)

Doršner, Ilja

2015-06-01

I address the validity of results presented in [S. Khalil, S. Salem, and M. Allam, Phys. Rev. D 89, 095011 (2014)] with regard to unification of gauge couplings within a particular S U (5 ) framework. The scalar sector of the proposed S U (5 ) model contains one 5-dimensional, one 24-dimensional, and one 45-dimensional representation. The authors discuss one specific unification scenario that supports the case for the LHC accessible color octet scalar. I show that the unification analysis in question is based on (i) an erroneous assumption related to the issue of nucleon stability and (ii) an incorrect input for the applicable set of renormalization group equations. This, in my view, invalidates the aforementioned gauge coupling unification study. I also question a source of the fermion mass relations presented in that work.

Naturalness in the Standard Model and beyond

NASA Astrophysics Data System (ADS)

Papaioannou, Anastasios Yiannaki

After an introduction to the Standard Model of particle physics and the unresolved question of naturalness posed by its treatment of electroweak symmetry breaking, we consider several different theoretical approaches that attempt to answer this question. First, we present work in which we consider the possibility that the Higgs boson, the long-sought hypothetical particle intimately associated with electroweak symmetry breaking, has a much larger mass than is usually assumed. Absent direct experimental evidence for a light Higgs boson (m ˜ O (100 GeV)), and precision electroweak data consistent with a light Higgs notwithstanding, we propose a heavier (m ˜ O (500 GeV)), thus more natural, Higgs boson. This heavy Higgs can be made consistent with the precision electroweak data if we also extend the Standard Model via the inclusion of new fermionic states near the weak energy scale. These new states, in addition to bringing the heavy Higgs boson in line with the precision data, also serve as a candidate for the elusive dark matter that pervades the universe. From there we go on to consider the problem of naturalness from the perspective of supersymmetry, one of the most popular candidates for physics beyond the Standard Model. In particular, the theory of the Next-to-Minimal Supersymmetric Standard Model (NMSSM) has found favor in its ability to solve the problem of naturalness posed by the Standard Model, in its hints at unification of the strong, weak, and electromagnetic interactions at high energies, and in its ability to provide supersymmetric particles as dark matter candidates. The NMSSM, however, requires rather large superpartner masses in order to accommodate a Higgs boson heavier than current experimental bounds while still maintaining gauge unification at high energies. We explore the possibility of new supersymmetric states at intermediate energies between the weak scale and the unification scale, which preserve gauge unification and allow a heavier Higgs, with only moderately heavy superpartners. Finally, we explore the possibility that previous attempts to resolve the naturalness problem may be too limited in scope. Perhaps the anthropic principle can instead provide a new way to answer such questions. We consider the intriguing scenario in which our observed universe is but one region of a much larger multi-verse, and the "constants" of nature are not constant after all, but take on a range of values. The anthropic principle's unique answer to the problem of naturalness is that only those regions of the multiverse with unnatural or "fine-tuned" parameters can give rise to the physical processes and structures that are necessary for our very existence; those regions with more natural values are dead universes where life is impossible. In particular, we examine an implementation of a unified physical theory, the Minimal Supersymmetric Standard Model (MSSM), within this multi-verse framework, and its consequences for the naturalness of electroweak symmetry breaking.

Sparticle spectroscopy of the minimal SO(10) model

DOE PAGES

Fukuyama, Takeshi; Okada, Nobuchika; Tran, Hieu Minh

2017-02-14

Here, the supersymmetric (SUSY) minimal SO(10) model is a well-motivated grand unified theory, where the Standard Model (SM) fermions have Yukawa couplings with only one 10-plet and onemore » $$\\overline{126}$$-plet Higgs fields and it is highly non-trivial if the realistic quark and lepton mass matrices can be reproduced in this context. It has been known that the best fit for all the SM fermion mass matrices is achieved by a vacuum expectation value of the $$\\overline{126}$$-plet Higgs field being at the intermediate scale of around O(10 13) GeV. Under the presence of the SO(10) symmetry breaking at the intermediate scale, the successful SM gauge coupling unification is at risk and likely to be spoiled. Recently, it has been shown that the low-energy fermion mass matrices, except for the down-quark mass predicted to be too low, are very well-fitted without the intermediate scale. In order to resolve the too-low down quark mass while keeping the other fittings intact, we consider SUSY threshold corrections to reproduce the right down quark mass. It turns out that this requires flavor-dependent soft parameters. Motivated by this fact, we calculate particle mass spectra at low energies with flavor-dependent sfermion masses at the grand unification scale. We present a benchmark particle mass spectrum which satisfies a variety of phenomenological constraints, in particular, the observed SM-like Higgs boson mass of around 125 GeV and the relic abundance of the neutralino dark matter as well as the experimental result of the muon anomalous magnetic moment. In the resultant mass spectrum, sleptons in the first and second generations, bino and winos are all light, and this scenario can be tested at the LHC Run-2 in the near future.« less

Developmental and gut-related changes to microbiomes of the cultured juvenile spiny lobster Panulirus ornatus.

PubMed

Ooi, Mei C; Goulden, Evan F; Smith, Gregory G; Nowak, Barbara F; Bridle, Andrew R

2017-12-01

With recent technologies making it possible for commercial scale closed life-cycle aquaculture production of spiny lobster (Panulirus ornatus) comes a strong impetus to further understand aspects of lobster health. The gut microbiome plays a crucial role in host health, affecting growth, digestion, immune responses and pathogen resistance. Herein we characterise and compare gut microbiomes across different developmental stages (6-7 days post-emergence [dpe], 52 dpe and 13 months post-emergence [mpe]) and gut regions (foregut, midgut and hindgut) of cultured P. ornatus juveniles. Gut samples were analysed using 16S rRNA next-generation sequencing. Core gut microbiomes of P. ornatus comprised the phyla Tenericutes and Proteobacteria. Within class Gammaproteobacteria, families Pseudoalteromonadaceae and Vibrionaceae were dominant members across the majority of the gut microbiomes. Characterisation of bacterial communities from 13 mpe lobsters indicated that the hindgut microbiome was more diverse and compositionally dissimilar to the foregut and midgut. The bacterial composition of the hindgut was more similar among younger juveniles (6-7 dpe and 52 dpe) compared to 13 mpe lobsters. This is the first study to explore gut microbiomes of spiny lobster juveniles. We demonstrate that the composition of the gut microbiome was shaped by gut region, whereas the structure of the hindgut microbiome was influenced by developmental stage. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Gut microbes and the brain: paradigm shift in neuroscience.

PubMed

Mayer, Emeran A; Knight, Rob; Mazmanian, Sarkis K; Cryan, John F; Tillisch, Kirsten

2014-11-12

The discovery of the size and complexity of the human microbiome has resulted in an ongoing reevaluation of many concepts of health and disease, including diseases affecting the CNS. A growing body of preclinical literature has demonstrated bidirectional signaling between the brain and the gut microbiome, involving multiple neurocrine and endocrine signaling mechanisms. While psychological and physical stressors can affect the composition and metabolic activity of the gut microbiota, experimental changes to the gut microbiome can affect emotional behavior and related brain systems. These findings have resulted in speculation that alterations in the gut microbiome may play a pathophysiological role in human brain diseases, including autism spectrum disorder, anxiety, depression, and chronic pain. Ongoing large-scale population-based studies of the gut microbiome and brain imaging studies looking at the effect of gut microbiome modulation on brain responses to emotion-related stimuli are seeking to validate these speculations. This article is a summary of emerging topics covered in a symposium and is not meant to be a comprehensive review of the subject. Copyright © 2014 the authors 0270-6474/14/3415490-07$15.00/0.

Calculational Schemes in GUTs

NASA Astrophysics Data System (ADS)

Kounnas, Costas

The following sections are included: * Introduction * Mass Spectrum in a Spontaneously Broken-Theory SU(5) - Minimal Model * Renormalization and Renormalization Group Equation (R.G.E.) * Step Approximation and Decoupling Theorem * Notion of the Effective Coupling Constant * First Estimation of MX, α(MX) and sin2θ(MW) * Renormalization Properties and Photon-Z Mixing * β-Function Definitions * Threshold Functions and Decoupling Theorem * MX-Determination * Proton Lifetime * sin2θ(μ)-Determination * Quark-Lepton Mass Relations (mb/mτ) * Overview of the Conventional GUTs - Hierarchy Problem * Stability of Hierarchy - Supersymmetric GUTS * Cosmologically Acceptable SUSY GUT Models * Radiative Breaking of SU(2) × U(1) — MW/MX Hierarchy Generation * No Scale Supergravity Models^{56,57} Dynamical Determination of M_{B}-M_{F} * Conclusion * References

Gut Microbiota Dysbiosis as Risk and Premorbid Factors of IBD and IBS Along the Childhood-Adulthood Transition.

PubMed

Putignani, Lorenza; Del Chierico, Federica; Vernocchi, Pamela; Cicala, Michele; Cucchiara, Salvatore; Dallapiccola, Bruno

2016-02-01

Gastrointestinal disorders, although clinically heterogeneous, share pathogenic mechanisms, including genetic susceptibility, impaired gut barrier function, altered microbiota, and environmental triggers (infections, social and behavioral factors, epigenetic control, and diet). Gut microbiota has been studied for inflammatory bowel disease (IBD) and irritable bowel syndrome (IBS) in either children or adults, while modifiable gut microbiota features, acting as risk and premorbid factors along the childhood-adulthood transition, have not been thoroughly investigated so far. Indeed, the relationship between variations of the entire host/microbiota/environmental scenario and clinical phenotypes is still not fully understood. In this respect, tracking gut dysbiosis grading may help deciphering host phenotype-genotype associations and microbiota shifts in an integrated top-down omics-based approach within large-scale pediatric and adult case-control cohorts. Large-scale gut microbiota signatures and host inflammation patterns may be integrated with dietary habits, under genetic and epigenetic constraints, providing gut dysbiosis profiles acting as risk predictors of IBD or IBS in preclinical cases. Tracking dysbiosis supports new personalized/stratified IBD and IBS prevention programmes, generating Decision Support System tools. They include (1) high risk or flare-up recurrence -omics-based dysbiosis profiles; (2) microbial and molecular biomarkers of health and disease; (3) -omics-based pipelines for laboratory medicine diagnostics; (4) health apps for self-management of score-based dietary profiles, which can be shared with clinicians for nutritional habit and lifestyle amendment; (5) -omics profiling data warehousing and public repositories for IBD and IBS profile consultation. Dysbiosis-related indexes can represent novel laboratory and clinical medicine tools preventing or postponing the disease, finally interfering with its natural history.

Model-based object classification using unification grammars and abstract representations

NASA Astrophysics Data System (ADS)

Liburdy, Kathleen A.; Schalkoff, Robert J.

1993-04-01

The design and implementation of a high level computer vision system which performs object classification is described. General object labelling and functional analysis require models of classes which display a wide range of geometric variations. A large representational gap exists between abstract criteria such as `graspable' and current geometric image descriptions. The vision system developed and described in this work addresses this problem and implements solutions based on a fusion of semantics, unification, and formal language theory. Object models are represented using unification grammars, which provide a framework for the integration of structure and semantics. A methodology for the derivation of symbolic image descriptions capable of interacting with the grammar-based models is described and implemented. A unification-based parser developed for this system achieves object classification by determining if the symbolic image description can be unified with the abstract criteria of an object model. Future research directions are indicated.

Non-alcoholic fatty liver disease, diet and gut microbiota

PubMed Central

Finelli, Carmine; Tarantino, Giovanni

2014-01-01

Non-alcoholic fatty liver disease (NAFLD) is a severe liver disease that is increasing in prevalence with the worldwide epidemic of obesity and its related insulin-resistance state. Evidence for the role of the gut microbiota in energy storage and the subsequent development of obesity and some of its related diseases is now well established. More recently, a new role of gut microbiota has emerged in NAFLD. The gut microbiota is involved in gut permeability, low-grade inflammation and immune balance, it modulates dietary choline metabolism, regulates bile acid metabolism and produces endogenous ethanol. All of these factors are molecular mechanisms by which the microbiota can induce NAFLD or its progression toward overt non-alcoholic steatohepatitis. Modification of the gut microbiota composition and/or its biochemical capacity by specific dietary or pharmacological interventions may advantageously affect host metabolism. Large-scale intervention trials, investigating the potential benefit of prebiotics and probiotics in improving cardiometabolic health in high-risk populations, are fervently awaited. PMID:26417275

Towards a complete Δ(27) × SO(10) GUT of flavour

NASA Astrophysics Data System (ADS)

Björkeroth, Fredrik

2017-09-01

We propose a renormalisable model based on Δ(27) family symmetry with an SO(10) grand unified theory (GUT) leading to a novel form of spontaneous geometrical CP violation. The symmetries are broken close to the GUT breaking scale to yield the minimal supersymmetric standard model with standard R-parity. Low-scale Yukawa structure is dictated by the coupling of matter to Δ(27) antitriplets \\bar φ whose vacuum expectation values are aligned in the CSD3 directions by the superpotential. Light physical Majorana neutrinos masses emerge from the seesaw mechanism within SO(10). The model predicts a normal neutrino mass hierarchy with the best-fit lightest neutrino mass m 1 ∼ 0.3 meV, CP-violating oscillation phase δl ≈ 280° and the remaining neutrino parameters all within 1σ of their best-fit experimental values.

Dark Matter from SUGRA GUTs: mSUGRA, NUSUGRA and Yukawa-unified SUGRA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Baer, Howard

2009-09-08

Gravity-mediated SUSY breaking models with R-parity conservation give rise to dark matter in the universe. I review neutralino dark matter in the minimal supergravity model (mSUGRA), models with non-universal soft SUSY breaking terms (NUSUGRA) which yield a well-tempered neutralino, and models with unified Yukawa couplings at the GUT scale (as may occur in an SO(10) SUSY GUT theory). These latter models have difficulty accomodating neutralino dark matter, but work very well if the dark matter particles are axions and axinos.

(In)dependence of 𝜃 in the Higgs regime without axions

NASA Astrophysics Data System (ADS)

Shifman, Mikhail; Vainshtein, Arkady

2017-05-01

We revisit the issue of the vacuum angle 𝜃 dependence in weakly coupled (Higgsed) Yang-Mills theories. Two most popular mechanisms for eliminating physical 𝜃 dependence are massless quarks and axions. Anselm and Johansen noted that the vacuum angle 𝜃EW, associated with the electroweak SU(2) in the Glashow-Weinberg-Salam model (Standard Model, SM), is unobservable although all fermion fields obtain masses through Higgsing and there is no axion. We generalize this idea to a broad class of Higgsed Yang-Mills theories. In the second part, we consider the consequences of Grand Unification. We start from a unifying group, e.g. SU(5), at a high ultraviolet scale and evolve the theory down within the Wilson procedure. If on the way to infrared the unifying group is broken down into a few factors, all factor groups inherit one and the same 𝜃 angle — that of the unifying group. We show that embedding the SM in SU(5) drastically changes the Anselm-Johansen conclusion: the electroweak vacuum angle 𝜃EW, equal to 𝜃QCD becomes in principle observable in ΔB = ΔL = ±1 processes. We also note in passing that if the axion mechanism is set up above the unification scale, we have one and the same axion in the electroweak theory and QCD, and their impacts are interdependent.

Fermion dark matter in gauge-Higgs unification

DOE PAGES

Maru, Nobuhito; Miyaji, Takashi; Okada, Nobuchika; ...

2017-07-11

Here, we propose a Majorana fermion dark matter in the context of a s imple gauge-Higgs Unification (GHU) scenario based on the gauge group SU(3)×U(1)' in 5-dimensional Minkowski space with a compactification of the 5th dimension on S 1/Z 2 orbifold. The dark matter particle is identified with the lightest mode in SU(3) triplet fermions additionally introduced in the 5-dimensional bulk. We find an allowed parameter region for the dark matter mass around a half of the Standard Model Higgs boson mass, which is consistent with the observed dark matter density and the constraint from the LUX 2016 result formore » the direct dark matter search. The entire allowed region will be covered by, for example, the LUX-ZEPLIN dark matter experiment in the near future. We also show that in the presence of the bulk SU(3) triplet fermions the 125 GeV Higgs boson mas s is reproduced through the renormalization group evolution of Higgs quartic coupling with the compactification scale of around 10 8 GeV.« less

What hadron collider is required to discover or falsify natural supersymmetry?

NASA Astrophysics Data System (ADS)

Baer, Howard; Barger, Vernon; Gainer, James S.; Huang, Peisi; Savoy, Michael; Serce, Hasan; Tata, Xerxes

2017-11-01

Weak scale supersymmetry (SUSY) remains a compelling extension of the Standard Model because it stabilizes the quantum corrections to the Higgs and W , Z boson masses. In natural SUSY models these corrections are, by definition, never much larger than the corresponding masses. Natural SUSY models all have an upper limit on the gluino mass, too high to lead to observable signals even at the high luminosity LHC. However, in models with gaugino mass unification, the wino is sufficiently light that supersymmetry discovery is possible in other channels over the entire natural SUSY parameter space with no worse than 3% fine-tuning. Here, we examine the SUSY reach in more general models with and without gaugino mass unification (specifically, natural generalized mirage mediation), and show that the high energy LHC (HE-LHC), a pp collider with √{ s } = 33 TeV, will be able to detect the SUSY signal over the entire allowed mass range. Thus, HE-LHC would either discover or conclusively falsify natural SUSY with better than 3% fine-tuning using a conservative measure that allows for correlations among the model parameters.

Gut microbiota dysbiosis and bacterial community assembly associated with cholesterol gallstones in large-scale study

PubMed Central

2013-01-01

Background Elucidating gut microbiota among gallstone patients as well as the complex bacterial colonization of cholesterol gallstones may help in both the prediction and subsequent lowered risk of cholelithiasis. To this end, we studied the composition of bacterial communities of gut, bile, and gallstones from 29 gallstone patients as well as the gut of 38 normal individuals, examining and analyzing some 299, 217 bacterial 16S rRNA gene sequences from 120 samples. Results First, as compared with normal individuals, in gallstone patients there were significant (P < 0.001) increases of gut bacterial phylum Proteobacteria and decreases of three gut bacterial genera, Faecalibacterium, Lachnospira, and Roseburia. Second, about 70% of gut bacterial operational taxonomic units (OTUs) from gallstone patients were detectable in the biliary tract and bacteria diversity of biliary tract was significantly (P < 0.001) higher than that of gut. Third, analysis of the biliary tract core microbiome (represented by 106 bacteria OTUs) among gallstone patients showed that 33.96% (36/106) of constituents can be matched to known bacterial species (15 of which have publicly available genomes). A genome-wide search of MDR, BSH, bG, and phL genes purpotedly associated with the formation of cholesterol gallstones showed that all 15 species with known genomes (e.g., Propionibacterium acnes, Bacteroides vulgates, and Pseudomonas putida) contained at least contained one of the four genes. This finding could potentially provide underlying information needed to explain the association between biliary tract microbiota and the formation of cholesterol gallstones. Conclusions To the best of our knowledge, this is the first study to discover gut microbiota dysbiosis among gallstone patients, the presence of which may be a key contributor to the complex bacteria community assembly linked with the presence of cholesterol gallstones. Likewise, this study also provides the first large-scale glimpse of biliary tract microbiota potentially associated with cholesterol gallstones. Such a characterization of the biliary tract core microbiome has potentially important biological and medical implications regarding the role of bacteria in the formation cholesterol gallstones. PMID:24083370

Unity of quark and lepton interactions with symplectic gauge symmetry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rajpoot, S.

1982-07-01

Properties of symplectic groups are reviewed and the gauge structure of Sp(2n) derived. The electroweak unification of leptons within Sp(8) gauge symmetry and grand unification of quarks and leptons within Sp(10) gauge symmetry are discussed.

Coverage of Unification Issue in North and South Korean Papers.

ERIC Educational Resources Information Center

Chang, Won H.

1981-01-01

Concludes that while the North Korean press gives more space to stories concerning the unification of the two Koreas than does the South, it is also more hostile and less varied in its coverage of the issue. (FL)

Differences in gut microbiota associated with age, sex, and stool consistency in healthy Japanese subjects.

PubMed

Takagi, Tomohisa; Naito, Yuji; Inoue, Ryo; Kashiwagi, Saori; Uchiyama, Kazuhiko; Mizushima, Katsura; Tsuchiya, Saeko; Dohi, Osamu; Yoshida, Naohisa; Kamada, Kazuhiro; Ishikawa, Takeshi; Handa, Osamu; Konishi, Hideyuki; Okuda, Kayo; Tsujimoto, Yoshimasa; Ohnogi, Hiromu; Itoh, Yoshito

2018-06-20

Human gut microbiota is involved in host health and disease development. Investigations of age-related and sex-related alterations in gut microbiota are limited, and the association between stool consistency and gut microbiota has not been fully investigated. We investigated gut microbiota differences related to age, sex, and stool consistency in healthy Japanese subjects. Two-hundred and seventy-seven healthy Japanese subjects aged 20-89 years were enrolled. Fecal samples were obtained to analyze the gut microbiome. We evaluated the association between stool consistency [Bristol stool scale (BSS)] and gut microbiota. Although there were significant differences in the microbial structure between males and females, the α-diversity of gut microbiota showed no difference between males and females or among age groups. There were significant increases in genera Prevotella, Megamonas, Fusobacterium, and Megasphaera and Bifidobacterium, Ruminococcus, and Akkermansia in males and females, respectively. The ratio of hard stools (BSS types 1 and 2) was higher in females; the ratio of loose stools (BSS type 6) was higher in males. No younger male had BSS type 1 or type 2. Fusobacterium in males was significantly higher in the loose consistency group, and Oscillospira was significantly higher in the hard consistency group in males; Campylobacter, SMB53, and Turicibacter were significantly higher in the hard consistency group in females. Several changes in gut microbiota were associated with age and sex. Stool consistency and gut microbiota associations emphasized the importance of stool consistency assessments to understand intestinal function.

How gut transcriptional function of Drosophila melanogaster varies with the presence and composition of the gut microbiota.

PubMed

Bost, Alyssa; Franzenburg, Soeren; Adair, Karen L; Martinson, Vincent G; Loeb, Greg; Douglas, Angela E

2018-04-01

Despite evidence from laboratory experiments that perturbation of the gut microbiota affects many traits of the animal host, our understanding of the effect of variation in microbiota composition on animals in natural populations is very limited. The core purpose of this study on the fruit fly Drosophila melanogaster was to identify the impact of natural variation in the taxonomic composition of gut bacterial communities on host traits, with the gut transcriptome as a molecular index of microbiota-responsive host traits. Use of the gut transcriptome was validated by demonstrating significant transcriptional differences between the guts of laboratory flies colonized with bacteria and maintained under axenic conditions. Wild Drosophila from six field collections made over two years had gut bacterial communities of diverse composition, dominated to varying extents by Acetobacteraceae and Enterobacteriaceae. The gut transcriptomes also varied among collections and differed markedly from those of laboratory flies. However, no overall relationship between variation in the wild fly transcriptome and taxonomic composition of the gut microbiota was evident at all taxonomic scales of bacteria tested for both individual fly genes and functional categories in Gene Ontology. We conclude that the interaction between microbiota composition and host functional traits may be confounded by uncontrolled variation in both ecological circumstance and host traits (e.g., genotype, age physiological condition) under natural conditions, and that microbiota effects on host traits identified in the laboratory should, therefore, be extrapolated to field population with great caution. © 2017 John Wiley & Sons Ltd.

Modelling survival: exposure pattern, species sensitivity and uncertainty.

PubMed

Ashauer, Roman; Albert, Carlo; Augustine, Starrlight; Cedergreen, Nina; Charles, Sandrine; Ducrot, Virginie; Focks, Andreas; Gabsi, Faten; Gergs, André; Goussen, Benoit; Jager, Tjalling; Kramer, Nynke I; Nyman, Anna-Maija; Poulsen, Veronique; Reichenberger, Stefan; Schäfer, Ralf B; Van den Brink, Paul J; Veltman, Karin; Vogel, Sören; Zimmer, Elke I; Preuss, Thomas G

2016-07-06

The General Unified Threshold model for Survival (GUTS) integrates previously published toxicokinetic-toxicodynamic models and estimates survival with explicitly defined assumptions. Importantly, GUTS accounts for time-variable exposure to the stressor. We performed three studies to test the ability of GUTS to predict survival of aquatic organisms across different pesticide exposure patterns, time scales and species. Firstly, using synthetic data, we identified experimental data requirements which allow for the estimation of all parameters of the GUTS proper model. Secondly, we assessed how well GUTS, calibrated with short-term survival data of Gammarus pulex exposed to four pesticides, can forecast effects of longer-term pulsed exposures. Thirdly, we tested the ability of GUTS to estimate 14-day median effect concentrations of malathion for a range of species and use these estimates to build species sensitivity distributions for different exposure patterns. We find that GUTS adequately predicts survival across exposure patterns that vary over time. When toxicity is assessed for time-variable concentrations species may differ in their responses depending on the exposure profile. This can result in different species sensitivity rankings and safe levels. The interplay of exposure pattern and species sensitivity deserves systematic investigation in order to better understand how organisms respond to stress, including humans.

Modelling survival: exposure pattern, species sensitivity and uncertainty

NASA Astrophysics Data System (ADS)

Ashauer, Roman; Albert, Carlo; Augustine, Starrlight; Cedergreen, Nina; Charles, Sandrine; Ducrot, Virginie; Focks, Andreas; Gabsi, Faten; Gergs, André; Goussen, Benoit; Jager, Tjalling; Kramer, Nynke I.; Nyman, Anna-Maija; Poulsen, Veronique; Reichenberger, Stefan; Schäfer, Ralf B.; van den Brink, Paul J.; Veltman, Karin; Vogel, Sören; Zimmer, Elke I.; Preuss, Thomas G.

2016-07-01

The General Unified Threshold model for Survival (GUTS) integrates previously published toxicokinetic-toxicodynamic models and estimates survival with explicitly defined assumptions. Importantly, GUTS accounts for time-variable exposure to the stressor. We performed three studies to test the ability of GUTS to predict survival of aquatic organisms across different pesticide exposure patterns, time scales and species. Firstly, using synthetic data, we identified experimental data requirements which allow for the estimation of all parameters of the GUTS proper model. Secondly, we assessed how well GUTS, calibrated with short-term survival data of Gammarus pulex exposed to four pesticides, can forecast effects of longer-term pulsed exposures. Thirdly, we tested the ability of GUTS to estimate 14-day median effect concentrations of malathion for a range of species and use these estimates to build species sensitivity distributions for different exposure patterns. We find that GUTS adequately predicts survival across exposure patterns that vary over time. When toxicity is assessed for time-variable concentrations species may differ in their responses depending on the exposure profile. This can result in different species sensitivity rankings and safe levels. The interplay of exposure pattern and species sensitivity deserves systematic investigation in order to better understand how organisms respond to stress, including humans.

Axion inflation, proton decay, and leptogenesis in S U (5 )×U (1 )P Q

NASA Astrophysics Data System (ADS)

Boucenna, Sofiane M.; Shafi, Qaisar

2018-04-01

We implement inflation in a nonsupersymmetric S U (5 ) model based on a nonminimal coupling of the axion field to gravity. The isocurvature fluctuations are adequately suppressed, axions comprise the dark matter, proton lifetime estimates are of order 8 ×1034- 3 ×1035 yr , and the observed baryon asymmetry arises via nonthermal leptogenesis. The presence of low-scale colored scalars ensures unification of the Standard Model gauge couplings and also helps in stabilizing the electroweak vacuum.

Deflected mirage mediation: a phenomenological framework for generalized supersymmetry breaking.

PubMed

Everett, Lisa L; Kim, Ian-Woo; Ouyang, Peter; Zurek, Kathryn M

2008-09-05

We present a general phenomenological framework for dialing between gravity mediation, gauge mediation, and anomaly mediation. The approach is motivated from recent developments in moduli stabilization, which suggest that gravity mediated terms can be effectively loop suppressed and thus comparable to gauge and anomaly mediated terms. The gauginos exhibit a mirage unification behavior at a "deflected" scale, and gluinos are often the lightest colored sparticles. The approach provides a rich setting in which to explore generalized supersymmetry breaking at the CERN Large Hadron Collider.

Unification of Gauge Couplings in the E{sub 6}SSM

DOE Office of Scientific and Technical Information (OSTI.GOV)

Athron, P.; King, S. F.; Luo, R.

2010-02-10

We argue that in the two--loop approximation gauge coupling unification in the exceptional supersymmetric standard model (E{sub 6}SSM) can be achieved for any phenomenologically reasonable value of alpha{sub 3}(M{sub Z}) consistent with the experimentally measured central value.

Unification of Fundamental Forces

NASA Astrophysics Data System (ADS)

Salam, Abdus; Taylor, Foreword by John C.

2005-10-01

Foreword John C. Taylor; 1. Unification of fundamental forces Abdus Salam; 2. History unfolding: an introduction to the two 1968 lectures by W. Heisenberg and P. A. M. Dirac Abdus Salam; 3. Theory, criticism, and a philosophy Werner Heisenberg; 4. Methods in theoretical physics Paul Adrian Maurice Dirac.

Exploring the Use of Enterprise Content Management Systems in Unification Types of Organizations

NASA Astrophysics Data System (ADS)

Izza Arshad, Noreen; Mehat, Mazlina; Ariff, Mohamed Imran Mohamed

2014-03-01

The aim of this paper is to better understand how highly standardized and integrated businesses known as unification types of organizations use Enterprise Content Management Systems (ECMS) to support their business processes. Multiple case study approach was used to study the ways two unification organizations use their ECMS in their daily work practices. Arising from these case studies are insights into the differing ways in which ECMS is used to support businesses. Based on the comparisons of the two cases, this study proposed that unification organizations may use ECMS in four ways, for: (1) collaboration, (2) information sharing that supports a standardized process structure, (3) building custom workflows that support integrated and standardized processes, and (4) providing links and access to information systems. These findings may guide organizations that are highly standardized and integrated in fashion, to achieve their intended ECMS-use, to understand reasons for ECMS failures and underutilization and to exploit technologies investments.

Searching the Future for the Legal Regime of Space Activities: the Need for Unification of National Space Legislation' Provisions

NASA Astrophysics Data System (ADS)

Negoda, S. A.

2002-01-01

space activities. For the future legal regime of space activities it is vital to preserve the existed principles and main provisions of the international space law. related legislations are developing rapidly. They become serious instrument for legal regulation of space activities. those projects with a foreign party involvement. Quite often partners in international space projects agree to choice a domestic law of one of them. They do this for defining a certain organizational and/or contractual issue (disputes settlement, for example) of the project. that such practice will spread widely. could help to preserve the existed important provisions of international space law (responsibility of states for their national activities, for instance). development of international space private law. We believe that solely special laws and regulations of national legislations could not regulate modern space activities. Being more and more commercial, space activities are becoming a real part of "downed to Earth" commercial activities. Therefore, in many countries provisions of civil, commercial, investment and other branches of national law are applied to such activities. which could low possible risks of such activities and to control them. Such unification seems to be suitable in the following fields: 1)implementation of provisions of international space law in national space laws; 2)definition of unified terminology, accepted by national laws of all parties; 3)unification in national legislations of a certain standards (insurance rates and rules, for instance); 4)unification in national laws of issues related to liability (for instance, a mutual wave of liability in certain types of 5)implementation in national laws of unified rules and procedures of space-related commercial disputes settlement; 6)unification of mechanisms for protection of space-related intellectual property. unification of their provisions. Special attention is paid to provisions of private law (including collision norms). conflicts between parties and national laws in light of expanding of application of national laws' provisions to space activities, 2) unification and further development of international space private law will help to maintain the authority of international public space law and to keep a proper hierarchy between these branches.

Generalized ghost pilgrim dark energy in F(T,TG) cosmology

NASA Astrophysics Data System (ADS)

Sharif, M.; Nazir, Kanwal

2016-07-01

This paper is devoted to study the generalized ghost pilgrim dark energy (PDE) model in F(T,TG) gravity with flat Friedmann-Robertson-Walker (FRW) universe. In this scenario, we reconstruct F(T,TG) models and evaluate the corresponding equation of state (EoS) parameter for different choices of the scale factors. We assume power-law scale factor, scale factor for unification of two phases, intermediate and bouncing scale factor. We study the behavior of reconstructed models and EoS parameters graphically. It is found that all the reconstructed models show decreasing behavior for PDE parameter u = -2. On the other hand, the EoS parameter indicates transition from dust-like matter to phantom era for all choices of the scale factor except intermediate for which this is less than - 1. We conclude that all the results are in agreement with PDE phenomenon.

Globally baryon symmetric cosmology, GUT spontaneous symmetry breaking, and the structure of the universe

NASA Technical Reports Server (NTRS)

Stecker, F. W.; Brown, R. W.

1979-01-01

Grand unified theories (GUT) such as SU(5), with spontaneous symmetry breaking, can lead more naturally to a globally baryon symmetric big bang cosmology with a domain structure than to a totally asymmetric cosmology. The symmetry is broken at random in causally independent domains, favoring neither a baryon nor an antibaryon excess on a universal scale. Because of the additional freedom in the high-energy physics allowed by such GUT gauge theories, new observational tests may be possible. Arguments in favor of this cosmology and various observational tests are discussed.

Explanatory Unification by Proofs in School Mathematics

ERIC Educational Resources Information Center

Komatsu, Kotaro; Fujita, Taro; Jones, Keith; Naoki, Sue

2018-01-01

Kitcher's idea of 'explanatory unification', while originally proposed in the philosophy of science, may also be relevant to mathematics education, as a way of enhancing student thinking and achieving classroom activity that is closer to authentic mathematical practice. There is, however, no mathematics education research treating explanatory…

Educational Systems and Rising Inequality: Eastern Germany after Unification

ERIC Educational Resources Information Center

von Below, Susanne; Powell, Justin J. W.; Roberts, Lance W.

2013-01-01

Educational systems considerably influence educational opportunities and the resulting social inequalities. Contrasting institutional regulations of both structures and contents, the authors present a typology of educational system types in Germany to analyze their effects on social inequality in eastern Germany after unification. After 1990, the…

Study of constrained minimal supersymmetry

NASA Astrophysics Data System (ADS)

Kane, G. L.; Kolda, Chris; Roszkowski, Leszek; Wells, James D.

1994-06-01

Taking seriously the phenomenological indications for supersymmetry we have made a detailed study of unified minimal SUSY, including many effects at the few percent level in a consistent fashion. We report here a general analysis of what can be studied without choosing a particular gauge group at the unification scale. Firstly, we find that the encouraging SUSY unification results of recent years do survive the challenge of a more complete and accurate analysis. Taking into account effects at the 5-10 % level leads to several improvements of previous results and allows us to sharpen our predictions for SUSY in the light of unification. We perform a thorough study of the parameter space and look for patterns to indicate SUSY predictions, so that they do not depend on arbitrary choices of some parameters or untested assumptions. Our results can be viewed as a fully constrained minimal SUSY standard model. The resulting model forms a well-defined basis for comparing the physics potential of different facilities. Very little of the acceptable parameter space has been excluded by CERN LEP or Fermilab so far, but a significant fraction can be covered when these accelerators are upgraded. A number of initial applications to the understanding of the values of mh and mt, the SUSY spectrum, detectability of SUSY at LEP II or Fermilab, B(b-->sγ), Γ(Z-->bb¯), dark matter, etc., are included in a separate section that might be of more interest to some readers than the technical aspects of model building. We formulate an approach to extracting SUSY parameters from data when superpartners are detected. For small tanβ or large mt both m1/2 and m0 are entirely bounded from above at ~1 TeV without having to use a fine-tuning constraint.

Unifying electromagnetism and gravitation without curvature

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schuetze, D.

1985-10-01

This paper is devoted to a five-dimensional unification of the gravitational theory of Hayashi and Shirafuji with electromagnetism. Interference effects are found between gravitational contributions of matter spin and electromagnetism. This unification becomes the classical Kaluza--Klein theory if contributions of the torsion tensor related with spin are neglected.

Representational Issues in Systemic Functional Grammar and Systemic Grammar and Functional Unification Grammar. ISI Reprint Series.

ERIC Educational Resources Information Center

Matthiessen, Christian; Kasper, Robert

Consisting of two separate papers, "Representational Issues in Systemic Functional Grammar," by Christian Matthiessen and "Systemic Grammar and Functional Unification Grammar," by Robert Kasper, this document deals with systemic aspects of natural language processing and linguistic theory and with computational applications of…

Vygotsky's Analysis of Children's Meaning Making Processes

ERIC Educational Resources Information Center

Mahn, Holbrook

2012-01-01

Vygotsky's work is extensive and covers many aspects of the development of children's meaning-making processes in social and cultural contexts. However, his main focus is on the examination of the unification of speaking and thinking processes. His investigation centers on the analysis of the entity created by this unification--an internal…

Corpus-Based Optimization of Language Models Derived from Unification Grammars

NASA Technical Reports Server (NTRS)

Rayner, Manny; Hockey, Beth Ann; James, Frankie; Bratt, Harry; Bratt, Elizabeth O.; Gawron, Mark; Goldwater, Sharon; Dowding, John; Bhagat, Amrita

2000-01-01

We describe a technique which makes it feasible to improve the performance of a language model derived from a manually constructed unification grammar, using low-quality untranscribed speech data and a minimum of human annotation. The method is on a medium-vocabulary spoken language command and control task.

Authenticity and Unification in Quechua Language Planning.

ERIC Educational Resources Information Center

Hornberger, Nancy H.; King, Kendall

1998-01-01

Examines the potentially problematic tension between the goals of authenticity and unification in Quechua-language planning. One case study examines the orthographic debate that arose in Peru, and the second case study concerns two indigenous communities in Saraguro in the Southern Ecuadorian highlands where Spanish predominates but two Quichua…

Experience with Acore: Implementing GHC with Actors

DTIC Science & Technology

1990-10-01

Our unification algorithm must differentiate between the two and perform the unification only from Foo to bar, no matter which of the two initially...variable Y. We :passive-unify it to X. Since X is uninstantiated, it buffers the : pasive -unify message. Now the guard goal, Y = ok is executed, and the

Emergence of microbial diversity due to cross-feeding interactions in a spatial model of gut microbial metabolism.

PubMed

Hoek, Milan J A van; Merks, Roeland M H

2017-05-16

The human gut contains approximately 10 14 bacteria, belonging to hundreds of different species. Together, these microbial species form a complex food web that can break down nutrient sources that our own digestive enzymes cannot handle, including complex polysaccharides, producing short chain fatty acids and additional metabolites, e.g., vitamin K. Microbial diversity is important for colonic health: Changes in the composition of the microbiota have been associated with inflammatory bowel disease, diabetes, obesity and Crohn's disease, and make the microbiota more vulnerable to infestation by harmful species, e.g., Clostridium difficile. To get a grip on the controlling factors of microbial diversity in the gut, we here propose a multi-scale, spatiotemporal dynamic flux-balance analysis model to study the emergence of metabolic diversity in a spatial gut-like, tubular environment. The model features genome-scale metabolic models (GEM) of microbial populations, resource sharing via extracellular metabolites, and spatial population dynamics and evolution. In this model, cross-feeding interactions emerge readily, despite the species' ability to metabolize sugars autonomously. Interestingly, the community requires cross-feeding for producing a realistic set of short-chain fatty acids from an input of glucose, If we let the composition of the microbial subpopulations change during invasion of adjacent space, a complex and stratified microbiota evolves, with subspecies specializing on cross-feeding interactions via a mechanism of compensated trait loss. The microbial diversity and stratification collapse if the flux through the gut is enhanced to mimic diarrhea. In conclusion, this in silico model is a helpful tool in systems biology to predict and explain the controlling factors of microbial diversity in the gut. It can be extended to include, e.g., complex nutrient sources, and host-microbiota interactions via the intestinal wall.

Effects of SO(10)-inspired scalar non-universality on the MSSM parameter space at large tanβ

NASA Astrophysics Data System (ADS)

Ramage, M. R.

2005-08-01

We analyze the parameter space of the ( μ>0, A=0) CMSSM at large tanβ with a small degree of non-universality originating from D-terms and Higgs-sfermion splitting inspired by SO(10) GUT models. The effects of such non-universalities on the sparticle spectrum and observables such as (, B(b→Xγ), the SUSY threshold corrections to the bottom mass and Ωh are examined in detail and the consequences for the allowed parameter space of the model are investigated. We find that even small deviations to universality can result in large qualitative differences compared to the universal case; for certain values of the parameters, we find, even at low m and m, that radiative electroweak symmetry breaking fails as a consequence of either |<0 or mA2<0. We find particularly large departures from the mSugra case for the neutralino relic density, which is sensitive to significant changes in the position and shape of the A resonance and a substantial increase in the Higgsino component of the LSP. However, we find that the corrections to the bottom mass are not sufficient to allow for Yukawa unification.

Doubling down on naturalness with a supersymmetric twin Higgs

NASA Astrophysics Data System (ADS)

Craig, Nathaniel; Howe, Kiel

2014-03-01

We show that naturalness of the weak scale can be comfortably reconciled with both LHC null results and observed Higgs properties provided the double protection of supersymmetry and the twin Higgs mechanism. This double protection radically alters conventional signs of naturalness at the LHC while respecting gauge coupling unification and precision electroweak limits. We find the measured Higgs mass, couplings, and percent-level naturalness of the weak scale are compatible with stops at ~ 3.5 TeV and higgsinos at ~ 1 TeV. The primary signs of naturalness in this scenario include modifications of Higgs couplings, a modest invisible Higgs width, resonant Higgs pair production, and an invisibly-decaying heavy Higgs.

Conceptual Revolution of the 20th Century Leading to One Grand Unified Concept -- The Quantum Vacuum

NASA Astrophysics Data System (ADS)

Sreekantan, B. V.

2014-07-01

Concepts and the relations between concepts are the basis for all our scientific understanding and explanation of the wide variety of constituents and phenomena in nature. Some of the fundamental concepts like space, time, matter, radiation, causality, etc. had remained unchanged for almost four hundred years from the time of the dawn of science. However all these underwent a drastic transformation in the 20th century because of two reasons. One, in the light of certain experimental findings two radical theories namely theory of relativity and theory of quantum mechanics replaced the classical theory that had dominated since Newton's time. Secondly, the science-technology spiral resulted in the discovery of very many new features of the universe both on the micro scale and on the mega scale. There was an exponential increase in our knowledge. These new facts could not be fitted into the old concepts. Apart from drastic revision, many new concepts had to be brought in. Despite all this, one very encouraging trend has been to discern a holistic synthesis and unification of the different concepts -- an endeavor that has been helped by experiments over a wide scale of energy and distances and most importantly from theoretical insights triggered by mathematical underpinnings. These developments in physics and astrophysics are pointing to one grand concept, namely, the "quantum vacuum" endowed with certain special properties, as the substratum from which all the constituents of the universe as well as the processes of the universe emerge, including the creation of the universe itself. This is the view, at least of some of the scientists. In this brief article the essence of these approaches toward unification is highlighted. Maybe life sciences can take a clue from these developments in physical sciences.

Cross Talk: The Microbiota and Neurodevelopmental Disorders

PubMed Central

Kelly, John R.; Minuto, Chiara; Cryan, John F.; Clarke, Gerard; Dinan, Timothy G.

2017-01-01

Humans evolved within a microbial ecosystem resulting in an interlinked physiology. The gut microbiota can signal to the brain via the immune system, the vagus nerve or other host-microbe interactions facilitated by gut hormones, regulation of tryptophan metabolism and microbial metabolites such as short chain fatty acids (SCFA), to influence brain development, function and behavior. Emerging evidence suggests that the gut microbiota may play a role in shaping cognitive networks encompassing emotional and social domains in neurodevelopmental disorders. Drawing upon pre-clinical and clinical evidence, we review the potential role of the gut microbiota in the origins and development of social and emotional domains related to Autism spectrum disorders (ASD) and schizophrenia. Small preliminary clinical studies have demonstrated gut microbiota alterations in both ASD and schizophrenia compared to healthy controls. However, we await the further development of mechanistic insights, together with large scale longitudinal clinical trials, that encompass a systems level dimensional approach, to investigate whether promising pre-clinical and initial clinical findings lead to clinical relevance. PMID:28966571

Modelling survival: exposure pattern, species sensitivity and uncertainty

PubMed Central

Ashauer, Roman; Albert, Carlo; Augustine, Starrlight; Cedergreen, Nina; Charles, Sandrine; Ducrot, Virginie; Focks, Andreas; Gabsi, Faten; Gergs, André; Goussen, Benoit; Jager, Tjalling; Kramer, Nynke I.; Nyman, Anna-Maija; Poulsen, Veronique; Reichenberger, Stefan; Schäfer, Ralf B.; Van den Brink, Paul J.; Veltman, Karin; Vogel, Sören; Zimmer, Elke I.; Preuss, Thomas G.

2016-01-01

The General Unified Threshold model for Survival (GUTS) integrates previously published toxicokinetic-toxicodynamic models and estimates survival with explicitly defined assumptions. Importantly, GUTS accounts for time-variable exposure to the stressor. We performed three studies to test the ability of GUTS to predict survival of aquatic organisms across different pesticide exposure patterns, time scales and species. Firstly, using synthetic data, we identified experimental data requirements which allow for the estimation of all parameters of the GUTS proper model. Secondly, we assessed how well GUTS, calibrated with short-term survival data of Gammarus pulex exposed to four pesticides, can forecast effects of longer-term pulsed exposures. Thirdly, we tested the ability of GUTS to estimate 14-day median effect concentrations of malathion for a range of species and use these estimates to build species sensitivity distributions for different exposure patterns. We find that GUTS adequately predicts survival across exposure patterns that vary over time. When toxicity is assessed for time-variable concentrations species may differ in their responses depending on the exposure profile. This can result in different species sensitivity rankings and safe levels. The interplay of exposure pattern and species sensitivity deserves systematic investigation in order to better understand how organisms respond to stress, including humans. PMID:27381500

An abundance of Epsilonproteobacteria revealed in the gut microbiome of the laboratory cultured sea urchin, Lytechinus variegatus

PubMed Central

Hakim, Joseph A.; Koo, Hyunmin; Dennis, Lacey N.; Kumar, Ranjit; Ptacek, Travis; Morrow, Casey D.; Lefkowitz, Elliot J.; Powell, Mickie L.; Bej, Asim K.; Watts, Stephen A.

2015-01-01

In this study, we have examined the bacterial community composition of the laboratory cultured sea urchin Lytechinus variegatus gut microbiome and its culture environment using NextGen amplicon sequencing of the V4 segment of the 16S rRNA gene, and downstream bioinformatics tools. Overall, the gut and tank water was dominated by Proteobacteria, whereas the feed consisted of a co-occurrence of Proteobacteria and Firmicutes at a high abundance. The gut tissue represented Epsilonproteobacteria as dominant, with order Campylobacterales at the highest relative abundance (>95%). However, the pharynx tissue was dominated by class Alphaproteobacteria. The gut digesta and egested fecal pellets had a high abundance of class Gammaproteobacteria, from which Vibrio was found to be the primary genus, and Epsilonproteobacteria, with genus Arcobacter occurring at a moderate level. At the class level, the tank water was dominated by Gammaproteobacteria, and the feed by Alphaproteobacteria. Multi-Dimensional Scaling analysis showed that the microbial community of the gut tissue clustered together, as did the pharynx tissue to the feed. The gut digesta and egested fecal pellets showed a similarity relationship to the tank water. Further analysis of Campylobacterales at a lower taxonomic level using the oligotyping method revealed 37 unique types across the 10 samples, where Oligotype 1 was primarily represented in the gut tissue. BLAST analysis identified Oligotype 1 to be Arcobacter sp., Sulfuricurvum sp., and Arcobacter bivalviorum at an identity level >90%. This study showed that although distinct microbial communities are evident across multiple components of the sea urchin gut ecosystem, there is a noticeable correlation between the overall microbial communities of the gut with the sea urchin L. variegatus culture environment. PMID:26528245

Advantages of unity with SU(4)-color: Reflections through neutrino oscillations, baryogenesis and proton decay

DOE PAGES

Pati, Jogesh C.

2017-03-24

As a tribute to Abdus Salam, I recall the initiation in 1972-73 of the idea of grand unification based on the view that lepton number is the fourth color. Motivated by aesthetic demands, these attempts led to the suggestion that the existing SU (2) x U (1) symmetry be extended minimally to the quark-lepton and left-right symmetric non-Abelian gauge structure G (2,2,4) = SU (2) L x SU (2) R x SU (4)-color. This served to unify members of a family within a single L-R self-conjugate multiplet. It also explained: the quantization of electric charge, the co-existence of quarks andmore » leptons, and that of their three basic forces $-$ weak, electromagnetic, and strong $-$ while providing the appealing possibility that nature is fundamentally left-right symmetric (parity-conserving). The minimal extension of the symmetry G (2,2,4) to a simple group is given by the attractive symmetry SO (10) that came a year later. The advantages of the core symmetry G (2,2,4), including those listed above (which are of course retained by SO (10) as well), are noted. These include the introductions of: (i) the right-handed neutrino as a compelling member of each family, (ii) (B-L) as a local symmetry, and (iii) the mass relation m (ν τ) Dirac = m top (M GUT). These three features, all arising due to SU(4)-color, as well as the gauge coupling uni cation scale (identi ed with the (B-L)- breaking scale), are crucially needed to understand the tiny mass-scales of the neutrino oscillations within the seesaw mechanism, and to implement successfully the mechanism of baryogenesis via leptogenesis. Implications of a well-motivated class of models based on supersymmetric SO(10) or a string-unified G(2, 2, 4) symmetry in 4D for (a) gauge coupling uni cation, (b) fermion masses and mixings, (c) neutrino osillations, (d) baryogenesis via leptogenesis, and last but not least (e) proton decay are presented. Recent works on the latter providing upper limits on proton lifetimes suggest that the potential for discovery of proton decay in the next-generation detectors would be high.« less

Europe '92: Consequences of the European Unification for Cultural Federalism in the Federal Republic of Germany.

ERIC Educational Resources Information Center

Berggreen, Ingeborg

1990-01-01

Discusses consequences of European unification in the Federal Republic of Germany. Focuses on the relationships between the European Community, the federal government of Germany, and the German states. Suggests that the German states are aware of their responsibility to give education and culture a European dimension. (NL)

77 FR 14538 - Announcement of Funding Awards Family Unification Program (FUP) Fiscal Year (FY) 2010

Federal Register 2010, 2011, 2012, 2013, 2014

2012-03-12

... announcement contains the consolidated names and addresses of the award recipients for this year under the FUP.... Appendix A Fiscal Year 2010 Funding Awards for the Family Unification Program Recipient Address City State... DEPARTMENT OF HOUSING AND URBAN DEVELOPMENT [Docket No. 5415-FA-15] Announcement of Funding Awards...

75 FR 79012 - Notice of Proposed Information Collection for Public Comment for the Family Unification Program...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-12-17

... Information Collection for Public Comment for the Family Unification Program (FUP) AGENCY: Office of the Assistant Secretary for Public and Indian Housing, HUD. ACTION: Notice. SUMMARY: The proposed information... Department is soliciting public comments on the subject proposal. DATES: Comments Due Date: February 15, 2011...

76 FR 66315 - Notice of Proposed Information Collection for Public Comment for the Family Unification Program...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-10-26

... Information Collection for Public Comment for the Family Unification Program (FUP) AGENCY: Office of the Assistant Secretary for Public and Indian Housing, HUD. ACTION: Notice. SUMMARY: The proposed information... Department is soliciting public comments on the subject proposal. DATES: Comments Due Date: December 27, 2011...

75 FR 28095 - Culturally Significant Object Imported for Exhibition Determinations: “E Ku Ana Ka Paia...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-19

... DEPARTMENT OF STATE [Public Notice: 7017] Culturally Significant Object Imported for Exhibition Determinations: ``E Ku Ana Ka Paia: Unification, Responsibility and the Ku Images'' SUMMARY: Notice is hereby... object to be included in the exhibition ``E Ku Ana Ka Paia: Unification, Responsibility and the Ku Images...

The Unification Space implemented as a localist neural net: predictions and error-tolerance in a constraint-based parser.

PubMed

Vosse, Theo; Kempen, Gerard

2009-12-01

We introduce a novel computer implementation of the Unification-Space parser (Vosse and Kempen in Cognition 75:105-143, 2000) in the form of a localist neural network whose dynamics is based on interactive activation and inhibition. The wiring of the network is determined by Performance Grammar (Kempen and Harbusch in Verb constructions in German and Dutch. Benjamins, Amsterdam, 2003), a lexicalist formalism with feature unification as binding operation. While the network is processing input word strings incrementally, the evolving shape of parse trees is represented in the form of changing patterns of activation in nodes that code for syntactic properties of words and phrases, and for the grammatical functions they fulfill. The system is capable, at least qualitatively and rudimentarily, of simulating several important dynamic aspects of human syntactic parsing, including garden-path phenomena and reanalysis, effects of complexity (various types of clause embeddings), fault-tolerance in case of unification failures and unknown words, and predictive parsing (expectation-based analysis, surprisal effects). English is the target language of the parser described.

Graviweak Unification, Invisible Universe and Dark Energy

NASA Astrophysics Data System (ADS)

Das, C. R.; Laperashvili, L. V.; Tureanu, A.

2013-07-01

We consider a graviweak unification model with the assumption of the existence of a hidden (invisible) sector of our Universe, parallel to the visible world. This Hidden World (HW) is assumed to be a Mirror World (MW) with broken mirror parity. We start with a diffeomorphism invariant theory of a gauge field valued in a Lie algebra g, which is broken spontaneously to the direct sum of the space-time Lorentz algebra and the Yang-Mills algebra: ˜ {g} = {{su}}(2) (grav)L ⊕ {{su}}(2)L — in the ordinary world, and ˜ {g}' = {{su}}(2){' (grav)}R ⊕ {{su}}(2)'R — in the hidden world. Using an extension of the Plebanski action for general relativity, we recover the actions for gravity, SU(2) Yang-Mills and Higgs fields in both (visible and invisible) sectors of the Universe, and also the total action. After symmetry breaking, all physical constants, including the Newton's constants, cosmological constants, Yang-Mills couplings, and other parameters, are determined by a single parameter g present in the initial action, and by the Higgs VEVs. The dark energy problem of this model predicts a too large supersymmetric breaking scale (MSUSY 1010GeV), which is not within the reach of the LHC experiments.

Muon g -2 in an alternative quasi-Yukawa unification with a less fine-tuned seesaw mechanism

NASA Astrophysics Data System (ADS)

Altın, Zafer; Ã-zdal, Ã.-zer; Ün, Cem Salih

2018-03-01

We explore the low-scale implications of the Pati-Salam Model including the TeV scale right-handed neutrinos interacting and mixing with the MSSM fields through the inverse seesaw (IS) mechanism in light of the muon anomalous magnetic moment (muon g -2 ) resolution and highlight the solutions which are compatible with the quasi-Yukawa unification condition (QYU). We find that the presence of the right-handed neutrinos causes heavy smuons as mμ ˜≳800 GeV in order to avoid tachyonic staus at the low scale. On the other hand, the sneutrinos can be as light as about 100 GeV, and along with the light charginos of mass ≲400 GeV , they can yield such large contributions to muon g -2 that the discrepancy between the experiment and the theory can be resolved. These solutions also require mχ˜1 ±≲400 GeV and mχ˜10≲200 . We also discuss such light chargino and neutralino along with the light stau (mτ ˜≳200 GeV ) in the light of current LHC results. Besides, the gluino mass lies in a range ˜[2.5 - 3.5 ] TeV , which is tested in near future experiments. In addition, the model predicts relatively light Higgsinos (μ ≲700 GeV ); hence, the second chargino mass is also light enough (≲700 GeV ) to contribute to muon g -2 . Light Higgsinos also yield less fine-tuning at the electroweak scale, and the regions compatible with muon g -2 restrict ΔEW≲100 strictly, and this region also satisfies the QYU condition. In addition, the ratios among the Yukawa couplings should be 1.8 ≲yt/yb≲2.6 , yτ/yb˜1.3 to yield correct fermion masses. Even though the right-handed neutrino Yukawa coupling can be varied freely, the solutions bound its range to 0.8 ≲yν/yb≲1.7 .

CARINA data synthesis project: pH data scale unification and cruise adjustments

NASA Astrophysics Data System (ADS)

Velo, A.; Pérez, F. F.; Lin, X.; Key, R. M.; Tanhua, T.; de La Paz, M.; Olsen, A.; van Heuven, S.; Jutterström, S.; Ríos, A. F.

2010-05-01

Data on carbon and carbon-relevant hydrographic and hydrochemical parameters from 188 previously non-publicly available cruise data sets in the Artic Mediterranean Seas (AMS), Atlantic Ocean and Southern Ocean have been retrieved and merged to a new database: CARINA (CARbon IN the Atlantic Ocean). These data have gone through rigorous quality control (QC) procedures to assure the highest possible quality and consistency. The data for most of the measured parameters in the CARINA database were objectively examined in order to quantify systematic differences in the reported values. Systematic biases found in the data have been corrected in the data products, three merged data files with measured, calculated and interpolated data for each of the three CARINA regions; AMS, Atlantic Ocean and Southern Ocean. Out of a total of 188 cruise entries in the CARINA database, 59 reported pH measured values. All reported pH data have been unified to the Sea-Water Scale (SWS) at 25 °C. Here we present details of the secondary QC of pH in the CARINA database and the scale unification to SWS at 25 °C. The pH scale has been converted for 36 cruises. Procedures of quality control, including crossover analysis between cruises and inversion analysis are described. Adjustments were applied to the pH values for 21 of the cruises in the CARINA dataset. With these adjustments the CARINA database is consistent both internally as well as with the GLODAP data, an oceanographic data set based on the World Hydrographic Program in the 1990s. Based on our analysis we estimate the internal consistency of the CARINA pH data to be 0.005 pH units. The CARINA data are now suitable for accurate assessments of, for example, oceanic carbon inventories and uptake rates, for ocean acidification assessment and for model validation.

Variation in Rural African Gut Microbiota Is Strongly Correlated with Colonization by Entamoeba and Subsistence

PubMed Central

Morton, Elise R.; Lynch, Joshua; Froment, Alain; Lafosse, Sophie; Heyer, Evelyne; Przeworski, Molly; Blekhman, Ran; Ségurel, Laure

2015-01-01

The human gut microbiota is impacted by host nutrition and health status and therefore represents a potentially adaptive phenotype influenced by metabolic and immune constraints. Previous studies contrasting rural populations in developing countries to urban industrialized ones have shown that industrialization is strongly correlated with patterns in human gut microbiota; however, we know little about the relative contribution of factors such as climate, diet, medicine, hygiene practices, host genetics, and parasitism. Here, we focus on fine-scale comparisons of African rural populations in order to (i) contrast the gut microbiota of populations inhabiting similar environments but having different traditional subsistence modes and either shared or distinct genetic ancestry, and (ii) examine the relationship between gut parasites and bacterial communities. Characterizing the fecal microbiota of Pygmy hunter-gatherers as well as Bantu individuals from both farming and fishing populations in Southwest Cameroon, we found that the gut parasite Entamoeba is significantly correlated with microbiome composition and diversity. We show that across populations, colonization by this protozoa can be predicted with 79% accuracy based on the composition of an individual's gut microbiota, and that several of the taxa most important for distinguishing Entamoeba absence or presence are signature taxa for autoimmune disorders. We also found gut communities to vary significantly with subsistence mode, notably with some taxa previously shown to be enriched in other hunter-gatherers groups (in Tanzania and Peru) also discriminating hunter-gatherers from neighboring farming or fishing populations in Cameroon. PMID:26619199

Building a Larger Tent for Public Health: Implications of the SOPHE-AAHE Unification

ERIC Educational Resources Information Center

Goodman, Robert Mark

2013-01-01

The unification of the American Association for Health Education (AAHE) and the Society for Public Health Education (SOPHE) generates a long-desired synergy, a ramping up of our leadership influence in promoting health. It also serves as an ongoing opportunity to reflect on how we synergize the distinct philosophic, scientific, and practical…

Principles of the Unification of Our Agency

ERIC Educational Resources Information Center

Roth, Klas

2011-01-01

Do we need principles of the unification of our agency, our mode of acting? Immanuel Kant and Christine Korsgaard argue that the reflective structure of our mind forces us to have some conception of ourselves, others and the world--including our agency--and that it is through will and reason, and in particular principles of our agency, that we…

A Solution to Moldova’s Transdniestrian Conflict: Regional Complex Interdependence

DTIC Science & Technology

2003-06-01

16 a. Reunion with Romania in 1918 and the Transdniestrian Factor...Russia (Soviet Union) and Romania for Bessarabia (MSSR), when Transdniestria was used as a psychological check factor. a. Reunion with Romania in 1918 ...fate of Bessarabia, resulting in unification with Romania in 1918 . However, that unification was not a welcome outcome for Bessarabians but rather

Lyndon, Johnson "Will" Seek and Accept a New Term as Northern Vermont University

ERIC Educational Resources Information Center

Spaulding, Jeb

2017-01-01

The Vermont State Colleges Board of Trustees has decided to combine two small state colleges--Lyndon State College and Johnson State College--that have been the access institutions for the northern and often most economically challenged region of Vermont. Northern Vermont University will result from the unification. The unification will multiply…

Threshold corrections to dimension-six proton decay operators in SUSY SU(5)

NASA Astrophysics Data System (ADS)

Kuwahara, Takumi

2017-11-01

Proton decay is a significant phenomenon to verify supersymmetric grand unified theories (SUSY GUTs). To predict the proton lifetime precisely, it is important to include the next-leading order (NLO) corrections to the proton decay operators. In this talk, we have shown threshold corrections to the dimension-six proton decay operators in the minimal SUSY SU(5) GUT, its extended models with extra matters, and the missing partner SUSY SU(5) GUT. As a result, we have found that the threshold effects give rise to corrections a few percent in the minimal setup and below 5% in its extension with extra matters in spite of a large unified coupling at the GUT scale. On the other hand, in the missing partner model the correction to the proton decay rate is suppression about 60% due to a number of component fields of 75 and their mass splitting.

A geographically-diverse collection of 418 human gut microbiome pathway genome databases

PubMed Central

Hahn, Aria S.; Altman, Tomer; Konwar, Kishori M.; Hanson, Niels W.; Kim, Dongjae; Relman, David A.; Dill, David L.; Hallam, Steven J.

2017-01-01

Advances in high-throughput sequencing are reshaping how we perceive microbial communities inhabiting the human body, with implications for therapeutic interventions. Several large-scale datasets derived from hundreds of human microbiome samples sourced from multiple studies are now publicly available. However, idiosyncratic data processing methods between studies introduce systematic differences that confound comparative analyses. To overcome these challenges, we developed GutCyc, a compendium of environmental pathway genome databases (ePGDBs) constructed from 418 assembled human microbiome datasets using MetaPathways, enabling reproducible functional metagenomic annotation. We also generated metabolic network reconstructions for each metagenome using the Pathway Tools software, empowering researchers and clinicians interested in visualizing and interpreting metabolic pathways encoded by the human gut microbiome. For the first time, GutCyc provides consistent annotations and metabolic pathway predictions, making possible comparative community analyses between health and disease states in inflammatory bowel disease, Crohn’s disease, and type 2 diabetes. GutCyc data products are searchable online, or may be downloaded and explored locally using MetaPathways and Pathway Tools. PMID:28398290

Biana: a software framework for compiling biological interactions and analyzing networks

PubMed Central

2010-01-01

Background The analysis and usage of biological data is hindered by the spread of information across multiple repositories and the difficulties posed by different nomenclature systems and storage formats. In particular, there is an important need for data unification in the study and use of protein-protein interactions. Without good integration strategies, it is difficult to analyze the whole set of available data and its properties. Results We introduce BIANA (Biologic Interactions and Network Analysis), a tool for biological information integration and network management. BIANA is a Python framework designed to achieve two major goals: i) the integration of multiple sources of biological information, including biological entities and their relationships, and ii) the management of biological information as a network where entities are nodes and relationships are edges. Moreover, BIANA uses properties of proteins and genes to infer latent biomolecular relationships by transferring edges to entities sharing similar properties. BIANA is also provided as a plugin for Cytoscape, which allows users to visualize and interactively manage the data. A web interface to BIANA providing basic functionalities is also available. The software can be downloaded under GNU GPL license from http://sbi.imim.es/web/BIANA.php. Conclusions BIANA's approach to data unification solves many of the nomenclature issues common to systems dealing with biological data. BIANA can easily be extended to handle new specific data repositories and new specific data types. The unification protocol allows BIANA to be a flexible tool suitable for different user requirements: non-expert users can use a suggested unification protocol while expert users can define their own specific unification rules. PMID:20105306

Biana: a software framework for compiling biological interactions and analyzing networks.

PubMed

Garcia-Garcia, Javier; Guney, Emre; Aragues, Ramon; Planas-Iglesias, Joan; Oliva, Baldo

2010-01-27

The analysis and usage of biological data is hindered by the spread of information across multiple repositories and the difficulties posed by different nomenclature systems and storage formats. In particular, there is an important need for data unification in the study and use of protein-protein interactions. Without good integration strategies, it is difficult to analyze the whole set of available data and its properties. We introduce BIANA (Biologic Interactions and Network Analysis), a tool for biological information integration and network management. BIANA is a Python framework designed to achieve two major goals: i) the integration of multiple sources of biological information, including biological entities and their relationships, and ii) the management of biological information as a network where entities are nodes and relationships are edges. Moreover, BIANA uses properties of proteins and genes to infer latent biomolecular relationships by transferring edges to entities sharing similar properties. BIANA is also provided as a plugin for Cytoscape, which allows users to visualize and interactively manage the data. A web interface to BIANA providing basic functionalities is also available. The software can be downloaded under GNU GPL license from http://sbi.imim.es/web/BIANA.php. BIANA's approach to data unification solves many of the nomenclature issues common to systems dealing with biological data. BIANA can easily be extended to handle new specific data repositories and new specific data types. The unification protocol allows BIANA to be a flexible tool suitable for different user requirements: non-expert users can use a suggested unification protocol while expert users can define their own specific unification rules.

Results from the ESA-funded project 'Height System Unification with GOCE'

NASA Astrophysics Data System (ADS)

Sideris, M. G.; Rangelova, E. V.; Gruber, T.; Rummel, R. F.; Woodworth, P. L.; Hughes, C. W.; Ihde, J.; Liebsch, G.; Schäfer, U.; Rülke, A.; Gerlach, C.; Haagmans, R.

2013-12-01

The paper summarizes the main results of a project, supported by the European Space Agency, whose main goal is to identify the impact of GOCE gravity field models on height system unification. In particular, the Technical University Munich, the University of Calgary and the National Oceanography Centre in Liverpool, together with the Bavarian Academy of Sciences, the Federal German Agency for Cartography and Geodesy, and the Geodetic Surveys of Canada, USA and Mexico, have investigated the role of GOCE-derived gravity and geoid models for regional and global height datum connection. GOCE provides three important components of height unification: highly accurate potential differences (geopotential numbers), a global geoid- or quasi-geoid-based reference surface for elevations that is independent of inaccuracies and inconsistencies of local and regional data, and a consistent way to refer to the same datum all the relevant gravimetric, topographic and oceanographic data. We introduce briefly the methodology that has been applied in order to unify height system in North America, North Atlantic Ocean and Europe, and present results obtained using the available GOCE-derived satellite-only geopotential models, and their combination with terrestrial data and ocean models. The effects of various factors, such as data noise, omission errors, indirect bias terms, ocean models and temporal variations, on height datum unification are also presented, highlighting their magnitude and importance in the estimation of offsets between vertical datums. Based on the experiences gained in this project, a general roadmap has been developed for height datum unification in regions with good, as well as poor, coverage in gravity and geodetic height and tide gauge control stations.

Unification of Forces: The Road to Jointness?

DTIC Science & Technology

1991-05-15

tend to resist large change--or innovation. Because organizations value "predictability, stability, and certainty," incremental change is the...preferred mode of behavior for organizations.29 Unification of the forces would be a large, rather than an incremental , change; thus, the services would...coordinating planning and bidgeting , providing unified direction, accounting and controlling weapons and equipment acquisition, eliminating duplication of

Gauge coupling unification and light exotica in string theory.

PubMed

Raby, Stuart; Wingerter, Akin

2007-08-03

In this Letter we consider the consequences for the CERN Large Hadron Collider of light vectorlike exotica with fractional electric charge. It is shown that such states are found in orbifold constructions of the heterotic string. Moreover, these exotica are consistent with gauge coupling unification at one loop, even though they do not come in complete multiplets of SU(5).

Korean Unification: The Way Forward

DTIC Science & Technology

2009-03-01

THE WAY FORWARD by Brian A. Forster March 2009 Thesis Advisor: Robert Weiner Second Reader: Christopher P .Twomey THIS PAGE ...INTENTIONALLY LEFT BLANK i REPORT DOCUMENTATION PAGE Form Approved OMB No. 0704-0188 Public reporting burden for this collection of information is...possibility of a unified Korean nation. 15. NUMBER OF PAGES 109 14. SUBJECT TERMS Korean Unification, The Republic of Korea, The Democratic People’s

3 CFR 8637 - Proclamation 8637 of March 16, 2011. 150th Anniversary of the Unification of Italy, 2011

Code of Federal Regulations, 2012 CFR

2012-01-01

... Italy lives on in the millions of American women and men of Italian descent who strengthen and enrich... we mark this important milestone in Italian history, we also honor the joint efforts of Americans and... 150th Anniversary of the Unification of Italy. I encourage all Americans to learn more about the history...

Starobinsky-like inflation, supercosmology and neutrino masses in no-scale flipped SU(5)

NASA Astrophysics Data System (ADS)

Ellis, John; Garcia, Marcos A. G.; Nagata, Natsumi; Nanopoulos, Dimitri V.; Olive, Keith A.

2017-07-01

We embed a flipped SU(5) × U(1) GUT model in a no-scale supergravity framework, and discuss its predictions for cosmic microwave background observables, which are similar to those of the Starobinsky model of inflation. Measurements of the tilt in the spectrum of scalar perturbations in the cosmic microwave background, ns, constrain significantly the model parameters. We also discuss the model's predictions for neutrino masses, and pay particular attention to the behaviours of scalar fields during and after inflation, reheating and the GUT phase transition. We argue in favor of strong reheating in order to avoid excessive entropy production which could dilute the generated baryon asymmetry.

The devil lies in the details: how variations in polysaccharide fine-structure impact the physiology and evolution of gut microbes

PubMed Central

Martens, Eric C.; Kelly, Amelia G.; Tauzin, Alexandra S.; Brumer, Harry

2014-01-01

The critical importance of gastrointestinal microbes to digestion of dietary fiber in humans and other mammals has been appreciated for decades. Symbiotic microorganisms expand mammalian digestive physiology by providing an armament of diverse polysaccharide degrading enzymes, which are largely absent in mammalian genomes. By out-sourcing this aspect of digestive physiology to our gut microbes, we maximize our ability to adapt to different carbohydrate nutrients on time scales as short as several hours, due to the ability of the gut microbial community to rapidly alter its physiology from meal-to-meal. Because of their ability to pick up new traits by lateral gene transfer, our gut microbes also enable adaption over time periods as long as centuries and millennia by adjusting their gene content to reflect cultural dietary trends. Despite a vast amount of sequence-based insight into the metabolic potential of gut microbes, the specific mechanisms by which symbiotic gut microorganisms recognize and attack complex carbohydrates remain largely undefined. Here, we review the recent literature on this topic and posit that numerous, subtle variations in polysaccharides diversify the spectrum of available nutrient niches, each of which may be best filled by a subset of microorganisms that possess the corresponding proteins to recognize and degrade different carbohydrates. Understanding these relationships at precise mechanistic levels will be essential to obtain a complete understanding of the forces shaping gut microbial ecology and genomic evolution, as well as devising strategies to intentionally manipulate the composition and physiology of the gut microbial community to improve health. PMID:25026064

Ecological Succession in the Honey Bee Gut: Shift in Lactobacillus Strain Dominance During Early Adult Development.

PubMed

Anderson, Kirk E; Rodrigues, Pedro A P; Mott, Brendon M; Maes, Patrick; Corby-Harris, Vanessa

2016-05-01

In many vertebrates, social interactions and nutrition can affect the colonization of gut symbionts across generations. In the highly social honey bee, it is unknown to what extent the hive environment and older worker individuals contribute to the generational transmission of core gut bacteria. We used high-throughput sequencing to investigate the effect of nest materials and social contact on the colonization and succession of core hindgut microbiota in workers. With only brief exposure to hive materials following natural eclosion, gut bacterial communities at 3 and 7 days contained phylotypes typically found in the guts of mature adults regardless of treatment. Continuous exposure to nest materials or direct social interactions with mature adults did not affect the diversity or abundance of gut bacterial communities at the scale examined. Similarly, a common pollen supplement fed by beekeepers during pollen dearth had no effect. A consideration of unique OTUs revealed extensive microbial succession independent of treatment. The dominant Lactobacillus strain at 3 days was largely replaced by a different strain at day 7, revealing the colonization signature of a pioneer species. Similar but less pronounced patterns were evident in less abundant OTU's, many of which may influence community succession via alteration of the gut environment. Our results indicate that the process of bacterial community colonization in the hindgut is resilient to changes in the nutritional, hive, and social environment. Greater taxonomic resolution is needed to accurately resolve questions of ecological succession and typical proportional variation within and between core members of the gut bacterial community.

D-term contributions and CEDM constraints in E6 × SU(2)F × U(1)A SUSY GUT model

NASA Astrophysics Data System (ADS)

Shigekami, Yoshihiro

2017-11-01

We focus on E6 × SU(2)F × U(1)A supersymmetric (SUSY) grand unified theory (GUT) model. In this model, realistic Yukawa hierarchies and mixings are realized by introducing all allowed interactions with 𝓞(1) coefficients. Moreover, we can take stop mass is smaller than the other sfermion masses. This type of spectrum called by natural SUSY type sfermion mass spectrum can suppress the SUSY contributions to flavor changing neutral current (FCNC) and stabilize weak scale at the same time. However, light stop predicts large up quark CEDM and stop contributions are not decoupled. Since there is Kobayashi-Maskawa phase, stop contributions to the up quark CEDM is severely constrained even if all SUSY breaking parameters and Higgsino mass parameter μ are real. In this model, real up Yukawa couplings are realized at the GUT scale because of spontaneous CP violation. Therefore CEDM bounds are satisfied, although up Yukawa couplings are complex at the SUSY scale through the renormalization equation group effects. We calculated the CEDMs and found that EDM constraints can be satisfied even if stop mass is 𝓞(1) TeV. In addition, we investigate the size of D-terms in this model. Since these D-term contributions is flavor dependent, the degeneracy of sfermion mass spectrum is destroyed and the size of D-term is strongly constrained by FCNCs when SUSY breaking scale is the weak scale. However, SUSY breaking scale is larger than 1 TeV in order to obtain 125 GeV Higgs mass, and therefore sizable D-term contribution is allowed. Furthermore, we obtained the non-trivial prediction for the difference of squared sfermion mass.

School Desegregation and Civil Society: The Unification of Alabama's Black and White Parent-Teacher Associations, 1954-1971

ERIC Educational Resources Information Center

Woyshner, Christine

2011-01-01

This articles discusses the unification of Alabama's black and white Parent-Teacher Associations from 1954 to 1971. Alabama was one of the last PTA state units to desegregate in the late 1960s, along with Arkansas, Georgia, Louisiana, Mississippi, South Carolina, and Texas. It was also the only state in which white members launched a successful…

Primordial monopoles, proton decay, gravity waves and GUT inflation

DOE PAGES

Şenoğuz, Vedat Nefer; Shafi, Qaisar

2015-11-18

Here, we consider non-supersymmetric GUT inflation models in which intermediate mass monopoles may survive inflation because of the restricted number of e-foldings experienced by the accompanying symmetry breaking. Thus, an observable flux of primordial magnetic monopoles, comparable to or a few orders below the Parker limitmay be present in the galaxy. The mass scale associated with the intermediate symmetry breaking is 10 13 GeVfor an observable flux level, with the corresponding monopoles an order of magnitude or so heavier. Examples based on SO(10)and E 6 yield such intermediate mass monopoles carrying respectively two and three units of Dirac magnetic charge.more » For GUT inflation driven by a gauge singlet scalar field with a Coleman–Weinberg or Higgs potential, compatibility with the Planck measurement of the scalar spectral index yields a Hubble constant (during horizon exit of cosmological scales) H~7–9 ×10 13 GeV, with the tensor to scalar ratio rpredicted to be ≳0.02. Proton lifetime estimates for decays mediated by the superheavy gauge bosons are also provided.« less

Human Gut Microbiome: Function Matters.

PubMed

Heintz-Buschart, Anna; Wilmes, Paul

2017-11-22

The human gut microbiome represents a complex ecosystem contributing essential functions to its host. Recent large-scale metagenomic studies have provided insights into its structure and functional potential. However, the functional repertoire which is actually contributed to human physiology remains largely unexplored. Here, by leveraging recent omics datasets, we challenge current assumptions regarding key attributes of the functional gut microbiome, in particular with respect to its variability. We further argue that the closing of existing gaps in functional knowledge should be addressed by a most-wanted gene list, the development and application of molecular and cellular high-throughput measurements, the development and sensible use of experimental models, as well as the direct study of observable molecular effects in the human host. Copyright © 2017 Elsevier Ltd. All rights reserved.

Maximum one-shot dissipated work from Rényi divergences

NASA Astrophysics Data System (ADS)

Yunger Halpern, Nicole; Garner, Andrew J. P.; Dahlsten, Oscar C. O.; Vedral, Vlatko

2018-05-01

Thermodynamics describes large-scale, slowly evolving systems. Two modern approaches generalize thermodynamics: fluctuation theorems, which concern finite-time nonequilibrium processes, and one-shot statistical mechanics, which concerns small scales and finite numbers of trials. Combining these approaches, we calculate a one-shot analog of the average dissipated work defined in fluctuation contexts: the cost of performing a protocol in finite time instead of quasistatically. The average dissipated work has been shown to be proportional to a relative entropy between phase-space densities, to a relative entropy between quantum states, and to a relative entropy between probability distributions over possible values of work. We derive one-shot analogs of all three equations, demonstrating that the order-infinity Rényi divergence is proportional to the maximum possible dissipated work in each case. These one-shot analogs of fluctuation-theorem results contribute to the unification of these two toolkits for small-scale, nonequilibrium statistical physics.

Maximum one-shot dissipated work from Rényi divergences.

PubMed

Yunger Halpern, Nicole; Garner, Andrew J P; Dahlsten, Oscar C O; Vedral, Vlatko

2018-05-01

Thermodynamics describes large-scale, slowly evolving systems. Two modern approaches generalize thermodynamics: fluctuation theorems, which concern finite-time nonequilibrium processes, and one-shot statistical mechanics, which concerns small scales and finite numbers of trials. Combining these approaches, we calculate a one-shot analog of the average dissipated work defined in fluctuation contexts: the cost of performing a protocol in finite time instead of quasistatically. The average dissipated work has been shown to be proportional to a relative entropy between phase-space densities, to a relative entropy between quantum states, and to a relative entropy between probability distributions over possible values of work. We derive one-shot analogs of all three equations, demonstrating that the order-infinity Rényi divergence is proportional to the maximum possible dissipated work in each case. These one-shot analogs of fluctuation-theorem results contribute to the unification of these two toolkits for small-scale, nonequilibrium statistical physics.

Antibiotics reduce genetic diversity of core species in the honeybee gut microbiome.

PubMed

Raymann, Kasie; Bobay, Louis-Marie; Moran, Nancy A

2018-04-01

The gut microbiome plays a key role in animal health, and perturbing it can have detrimental effects. One major source of perturbation to microbiomes, in humans and human-associated animals, is exposure to antibiotics. Most studies of how antibiotics affect the microbiome have used amplicon sequencing of highly conserved 16S rRNA sequences, as in a recent study showing that antibiotic treatment severely alters the species-level composition of the honeybee gut microbiome. But because the standard 16S rRNA-based methods cannot resolve closely related strains, strain-level changes could not be evaluated. To address this gap, we used amplicon sequencing of protein-coding genes to assess effects of antibiotics on fine-scale genetic diversity of the honeybee gut microbiota. We followed the population dynamics of alleles within two dominant core species of the bee gut community, Gilliamella apicola and Snodgrassella alvi, following antibiotic perturbation. Whereas we observed a large reduction in genetic diversity in G. apicola, S. alvi diversity was mostly unaffected. The reduction in G. apicola diversity accompanied an increase in the frequency of several alleles, suggesting resistance to antibiotic treatment. We find that antibiotic perturbation can cause major shifts in diversity and that the extent of these shifts can vary substantially across species. Thus, antibiotics impact not only species composition, but also allelic diversity within species, potentially affecting hosts if variants with particular functions are reduced or eliminated. Overall, we show that amplicon sequencing of protein-coding genes, without clustering into operational taxonomic units, provides an accurate picture of the fine-scale dynamics of microbial communities over time. © 2017 John Wiley & Sons Ltd.

Properties of Low-mass AGN as They Relate to Unification and Massive AGN

NASA Astrophysics Data System (ADS)

Hood, Carol E.

2011-01-01

Current unification models of AGN suggest the observational differences between Type 1 and Type 2 objects are solely due to the orientation angle of the object. Observations have proved consistent with predictions and continue to strengthen the case for unification, however, many are still searching for "true" Type 2 objects, including predictions of their formation due to low luminosity or low accretion rate. Low-mass (< 106solar masses) AGN provide interesting environments in which these unification models can be studied. We also aim to compare the properties of low-mass AGN with their more massive counterparts to look for structural similarities and differences over a more substantial range of luminosities and accretion rates than previously studied. We present an in-depth multi-wavelength study of one of the prototypical low-mass AGN, POX 52, investigating the properties of the central engine along with that of the host galaxy. This includes data from the VLA, Spitzer, 2MASS, HST, GALEX, XMM, and Chandra, providing us with one of the most comprehensive looks into low-mass AGN. Unlike the other prototypical low-mass AGN, NGC 4395, POX 52 resides in a dwarf elliptical galaxy, accreting at ≈ 0.35 the Eddington limit. Additionally, we examine a sample 41 Type 1 and Type 2 objects, including POX 52 and NGC 4395, with the Spitzer IRS and a sub-sample of those with XMM to study the absorption properties of low-mass AGN, to test the validity of unification models in the low-mass regime, and to investigate possible structural differences between objects with low and high mass black holes and accretion rates. We will discuss the IR spectral shape and present emission-line diagnostics for Type 1 and Type 2 AGNs at low masses.

Height system unification based on the Fixed Geodetic Boundary Value Problem with limited availability of gravity data

NASA Astrophysics Data System (ADS)

Porz, Lucas; Grombein, Thomas; Seitz, Kurt; Heck, Bernhard; Wenzel, Friedemann

2017-04-01

Regional height reference systems are generally related to individual vertical datums defined by specific tide gauges. The discrepancies of these vertical datums with respect to a unified global datum cause height system biases that range in an order of 1-2 m at a global scale. One approach for unification of height systems relates to the solution of a Geodetic Boundary Value Problem (GBVP). In particular, the fixed GBVP, using gravity disturbances as boundary values, is solved at GNSS/leveling benchmarks, whereupon height datum offsets can be estimated by least squares adjustment. In spherical approximation, the solution of the fixed GBVP is obtained by Hotine's spherical integral formula. However, this method relies on the global availability of gravity data. In practice, gravity data of the necessary resolution and accuracy is not accessible globally. Thus, the integration is restricted to an area within the vicinity of the computation points. The resulting truncation error can reach several meters in height, making height system unification without further consideration of this effect unfeasible. This study analyzes methods for reducing the truncation error by combining terrestrial gravity data with satellite-based global geopotential models and by modifying the integral kernel in order to accelerate the convergence of the resulting potential. For this purpose, EGM2008-derived gravity functionals are used as pseudo-observations to be integrated numerically. Geopotential models of different spectral degrees are implemented using a remove-restore-scheme. Three types of modification are applied to the Hotine-kernel and the convergence of the resulting potential is analyzed. In a further step, the impact of these operations on the estimation of height datum offsets is investigated within a closed loop simulation. A minimum integration radius in combination with a specific modification of the Hotine-kernel is suggested in order to achieve sub-cm accuracy for the estimation of height datum offsets.

Contemporary data communications and local networking principles

NASA Astrophysics Data System (ADS)

Chartrand, G. A.

1982-08-01

The most important issue of data communications today is networking which can be roughly divided into two catagories: local networking; and distributed processing. The most sought after aspect of local networking is office automation. Office automation really is the grand unification of all local communications and not of a new type of business office as the name might imply. This unification is the ability to have voice, data, and video carried by the same medium and managed by the same network resources. There are many different ways this unification can be done, and many manufacturers are designing systems to accomplish the task. Distributed processing attempts to share resources between computer systems and peripheral subsystems from the same or different manufacturers. There are several companies that are trying to solve both networking problems with the same network architecture.

Genome-resolved metaproteomic characterization of preterm infant gut microbiota development reveals species-specific metabolic shifts and variabilities during early life

DOE PAGES

Xiong, Weili; Brown, Christopher T.; Morowitz, Michael J.; ...

2017-07-10

Establishment of the human gut microbiota begins at birth. This early-life microbiota development can impact host physiology during infancy and even across an entire life span. But, the functional stability and population structure of the gut microbiota during initial colonization remain poorly understood. Metaproteomics is an emerging technology for the large-scale characterization of metabolic functions in complex microbial communities (gut microbiota). We applied a metagenome-informed metaproteomic approach to study the temporal and inter-individual differences of metabolic functions during microbial colonization of preterm human infants’ gut. By analyzing 30 individual fecal samples, we identified up to 12,568 protein groups for eachmore » of four infants, including both human and microbial proteins. With genome-resolved matched metagenomics, proteins were confidently identified at the species/strain level. The maximum percentage of the proteome detected for the abundant organisms was ~45%. A time-dependent increase in the relative abundance of microbial versus human proteins suggested increasing microbial colonization during the first few weeks of early life. We observed remarkable variations and temporal shifts in the relative protein abundances of each organism in these preterm gut communities. Given the dissimilarity of the communities, only 81 microbial EggNOG orthologous groups and 57 human proteins were observed across all samples. These conserved microbial proteins were involved in carbohydrate, energy, amino acid and nucleotide metabolism while conserved human proteins were related to immune response and mucosal maturation. We also identified seven proteome clusters for the communities and showed infant gut proteome profiles were unstable across time and not individual-specific. By applying a gut-specific metabolic module (GMM) analysis, we found that gut communities varied primarily in the contribution of nutrient (carbohydrates, lipids, and amino acids) utilization and short-chain fatty acid production. Overall, this study reports species-specific proteome profiles and metabolic functions of human gut microbiota during early colonization. In particular, our work contributes to reveal microbiota-associated shifts and variations in the metabolism of three major nutrient sources and short-chain fatty acid during colonization of preterm infant gut.« less

Genome-resolved metaproteomic characterization of preterm infant gut microbiota development reveals species-specific metabolic shifts and variabilities during early life

DOE Office of Scientific and Technical Information (OSTI.GOV)

Xiong, Weili; Brown, Christopher T.; Morowitz, Michael J.

Establishment of the human gut microbiota begins at birth. This early-life microbiota development can impact host physiology during infancy and even across an entire life span. But, the functional stability and population structure of the gut microbiota during initial colonization remain poorly understood. Metaproteomics is an emerging technology for the large-scale characterization of metabolic functions in complex microbial communities (gut microbiota). We applied a metagenome-informed metaproteomic approach to study the temporal and inter-individual differences of metabolic functions during microbial colonization of preterm human infants’ gut. By analyzing 30 individual fecal samples, we identified up to 12,568 protein groups for eachmore » of four infants, including both human and microbial proteins. With genome-resolved matched metagenomics, proteins were confidently identified at the species/strain level. The maximum percentage of the proteome detected for the abundant organisms was ~45%. A time-dependent increase in the relative abundance of microbial versus human proteins suggested increasing microbial colonization during the first few weeks of early life. We observed remarkable variations and temporal shifts in the relative protein abundances of each organism in these preterm gut communities. Given the dissimilarity of the communities, only 81 microbial EggNOG orthologous groups and 57 human proteins were observed across all samples. These conserved microbial proteins were involved in carbohydrate, energy, amino acid and nucleotide metabolism while conserved human proteins were related to immune response and mucosal maturation. We also identified seven proteome clusters for the communities and showed infant gut proteome profiles were unstable across time and not individual-specific. By applying a gut-specific metabolic module (GMM) analysis, we found that gut communities varied primarily in the contribution of nutrient (carbohydrates, lipids, and amino acids) utilization and short-chain fatty acid production. Overall, this study reports species-specific proteome profiles and metabolic functions of human gut microbiota during early colonization. In particular, our work contributes to reveal microbiota-associated shifts and variations in the metabolism of three major nutrient sources and short-chain fatty acid during colonization of preterm infant gut.« less

Genome-resolved metaproteomic characterization of preterm infant gut microbiota development reveals species-specific metabolic shifts and variabilities during early life.

PubMed

Xiong, Weili; Brown, Christopher T; Morowitz, Michael J; Banfield, Jillian F; Hettich, Robert L

2017-07-10

Establishment of the human gut microbiota begins at birth. This early-life microbiota development can impact host physiology during infancy and even across an entire life span. However, the functional stability and population structure of the gut microbiota during initial colonization remain poorly understood. Metaproteomics is an emerging technology for the large-scale characterization of metabolic functions in complex microbial communities (gut microbiota). We applied a metagenome-informed metaproteomic approach to study the temporal and inter-individual differences of metabolic functions during microbial colonization of preterm human infants' gut. By analyzing 30 individual fecal samples, we identified up to 12,568 protein groups for each of four infants, including both human and microbial proteins. With genome-resolved matched metagenomics, proteins were confidently identified at the species/strain level. The maximum percentage of the proteome detected for the abundant organisms was ~45%. A time-dependent increase in the relative abundance of microbial versus human proteins suggested increasing microbial colonization during the first few weeks of early life. We observed remarkable variations and temporal shifts in the relative protein abundances of each organism in these preterm gut communities. Given the dissimilarity of the communities, only 81 microbial EggNOG orthologous groups and 57 human proteins were observed across all samples. These conserved microbial proteins were involved in carbohydrate, energy, amino acid and nucleotide metabolism while conserved human proteins were related to immune response and mucosal maturation. We identified seven proteome clusters for the communities and showed infant gut proteome profiles were unstable across time and not individual-specific. Applying a gut-specific metabolic module (GMM) analysis, we found that gut communities varied primarily in the contribution of nutrient (carbohydrates, lipids, and amino acids) utilization and short-chain fatty acid production. Overall, this study reports species-specific proteome profiles and metabolic functions of human gut microbiota during early colonization. In particular, our work contributes to reveal microbiota-associated shifts and variations in the metabolism of three major nutrient sources and short-chain fatty acid during colonization of preterm infant gut.

Starobinsky-like inflation, supercosmology and neutrino masses in no-scale flipped SU(5)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ellis, John; Garcia, Marcos A.G.; Nagata, Natsumi

2017-07-01

We embed a flipped SU(5) × U(1) GUT model in a no-scale supergravity framework, and discuss its predictions for cosmic microwave background observables, which are similar to those of the Starobinsky model of inflation. Measurements of the tilt in the spectrum of scalar perturbations in the cosmic microwave background, n {sub s} , constrain significantly the model parameters. We also discuss the model's predictions for neutrino masses, and pay particular attention to the behaviours of scalar fields during and after inflation, reheating and the GUT phase transition. We argue in favor of strong reheating in order to avoid excessive entropymore » production which could dilute the generated baryon asymmetry.« less

Diet and gut microbiota of two supralittoral amphipods Orchestia montagui and Talitrus saltator living in different microhabitats

NASA Astrophysics Data System (ADS)

Abdelrhman, Khaled F. A.; Bacci, Giovanni; Nistri, Annamaria; Mengoni, Alessio; Ugolini, Alberto

2017-10-01

Talitrus saltator (Montagu) and Orchestia montagui Audouin live in different microhabitats of the same supralittoral belt. T. saltator can be found in the damp sand of beaches with scarce or absent wracked material near the water line. O. montagui is frequently found in the Posidonia banquettes or under wracked material, often in contact with the substrate. This study investigates the effect of diet on species-specific gut microbiota patterns in these talitrid species. Adults were collected and fed with artificial food (commercial fish food and pieces of blotting paper) for 51 days. Gut microbiota were analyzed at five time intervals (0 h, 24 h, 7, 23 and 51 days) by 16S rRNA gene metagenomic analysis and by estimating the relative abundance of cellulases (glycosyl hydrolase gene family 48, GHF48) gene copies. The gut microbiota of O. montagui was more affected than that of T. saltator by diet shift. Although the taxonomic profile of the gut microbiota varied with time in both species, with an increase of Protobacteria in O. montagui and of Actinobacteria and Bacteroidetes in T. saltator, genes involved in cellulose degradation (GHF48 family) showed a large-scale increase in O. montagui but not in T. saltator. We conclude that the diet variation has different influence on the composition of gut microbiota in the two talitrid species in accordance with their different alimentary habits: the more generalist T. saltator (detritivore, grazer, and scavenger) showed less changes in its gut microbiota composition than the more specialist O. montagui (detritivore and grazer), which strongly modified its gut microbiota composition by the captivity diet.

750 GeV diphotons: implications for supersymmetric unification II

DOE PAGES

Hall, Lawrence J.; Harigaya, Keisuke; Nomura, Yasunori

2016-07-29

Perturbative supersymmetric gauge coupling unification is possible in six theories where complete SU (5) TeV-scale multiplets of vector matter account for the size of the reported 750 GeV diphoton resonance, interpreted as a singlet multiplet S=(s+ia)/√2. One of these has a full generation of vector matter and a unified gauge coupling αG ~ 1. The diphoton signal rate is enhanced by loops of vector squarks and sleptons, especially when the trilinear A couplings are large. If the SH uH d coupling is absent, both s and a can contribute to the resonance, which may then have a large apparent widthmore » if the mass splitting from s and a arises from loops of vector matter. The width depends sensitively on A parameters and phases of the vector squark and slepton masses. Vector quarks and/or squarks are expected to be in reach of the LHC. If the SH uH d coupling is present, a leads to a narrow diphoton resonance, while a second resonance with decays s → hh, W +W – , ZZ is likely to be discovered at future LHC runs. In some of the theories a non-standard origin or running of the soft parameters is required, for example involving conformal hidden sector interactions.« less

Grand unification scale primordial black holes: consequences and constraints.

PubMed

Anantua, Richard; Easther, Richard; Giblin, John T

2009-09-11

A population of very light primordial black holes which evaporate before nucleosynthesis begins is unconstrained unless the decaying black holes leave stable relics. We show that gravitons Hawking radiated from these black holes would source a substantial stochastic background of high frequency gravititational waves (10(12) Hz or more) in the present Universe. These black holes may lead to a transient period of matter-dominated expansion. In this case the primordial Universe could be temporarily dominated by large clusters of "Hawking stars" and the resulting gravitational wave spectrum is independent of the initial number density of primordial black holes.

Proof-Term Synthesis on Dependent-Type Systems via Explicit Substitutions

DTIC Science & Technology

1999-11-01

oriented functional language OCaml , in about 50 lines. We have also implemented a higher-order unification algorithm for ground expressions. The soundness... OCaml , and it is electronically available by contacting the author. The underlying theory of the method proposed here is the An^-calculus. We believe...CORNES, Conception d’un langage de haut niveau de representation de preuves: recurrence par filtrage de motifs, unification en presence de types

Changes in Psychological Distress among East German Adolescents Facing German Unification: The Role of Commitment to the Old System and of Self-Efficacy Beliefs

ERIC Educational Resources Information Center

Pinquart, Martin; Silbereisen, Rainer K.; Juang, Linda P.

2004-01-01

Abrupt social change, such as the breakdown of a political system of the former communist states, presents a major adaptive challenge to the individual. The authors analyzed whether commitment to the old political system and high self-efficacy beliefs measured before German unification would predict change in psychological distress in East German…

On a radiative origin of the Standard Model from trinification

NASA Astrophysics Data System (ADS)

Camargo-Molina, José Eliel; Morais, António P.; Pasechnik, Roman; Wessén, Jonas

2016-09-01

In this work, we present a trinification-based grand unified theory incorporating a global SU(3) family symmetry that after a spontaneous breaking leads to a left-right symmetric model. Already at the classical level, this model can accommodate the matter content and the quark Cabbibo mixing in the Standard Model (SM) with only one Yukawa coupling at the unification scale. Considering the minimal low-energy scenario with the least amount of light states, we show that the resulting effective theory enables dynamical breaking of its gauge group down to that of the SM by means of radiative corrections accounted for by the renormalisation group evolution at one loop. This result paves the way for a consistent explanation of the SM breaking scale and fermion mass hierarchies.

Asymmetric dark matter models in SO(10)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nagata, Natsumi; Olive, Keith A.; Zheng, Jiaming, E-mail: natsumi@hep-th.phys.s.u-tokyo.ac.jp, E-mail: olive@physics.umn.edu, E-mail: zheng@physics.umn.edu

2017-02-01

We systematically study the possibilities for asymmetric dark matter in the context of non-supersymmetric SO(10) models of grand unification. Dark matter stability in SO(10) is guaranteed by a remnant Z{sub 2} symmetry which is preserved when the intermediate scale gauge subgroup of SO(10) is broken by a (\\bf 126) dimensional representation. The asymmetry in the dark matter states is directly generated through the out-of-equilibrium decay of particles around the intermediate scale, or transferred from the baryon/lepton asymmetry generated in the Standard Model sector by leptogenesis. We systematically classify possible asymmetric dark matter candidates in terms of their quantum numbers, andmore » derive the conditions for each case that the observed dark matter density is (mostly) explained by the asymmetry of dark matter particles.« less

Comparative Metagenomics Revealed Commonly Enriched Gene Sets in Human Gut Microbiomes

PubMed Central

Kurokawa, Ken; Itoh, Takehiko; Kuwahara, Tomomi; Oshima, Kenshiro; Toh, Hidehiro; Toyoda, Atsushi; Takami, Hideto; Morita, Hidetoshi; Sharma, Vineet K.; Srivastava, Tulika P.; Taylor, Todd D.; Noguchi, Hideki; Mori, Hiroshi; Ogura, Yoshitoshi; Ehrlich, Dusko S.; Itoh, Kikuji; Takagi, Toshihisa; Sakaki, Yoshiyuki; Hayashi, Tetsuya; Hattori, Masahira

2007-01-01

Numerous microbes inhabit the human intestine, many of which are uncharacterized or uncultivable. They form a complex microbial community that deeply affects human physiology. To identify the genomic features common to all human gut microbiomes as well as those variable among them, we performed a large-scale comparative metagenomic analysis of fecal samples from 13 healthy individuals of various ages, including unweaned infants. We found that, while the gut microbiota from unweaned infants were simple and showed a high inter-individual variation in taxonomic and gene composition, those from adults and weaned children were more complex but showed a high functional uniformity regardless of age or sex. In searching for the genes over-represented in gut microbiomes, we identified 237 gene families commonly enriched in adult-type and 136 families in infant-type microbiomes, with a small overlap. An analysis of their predicted functions revealed various strategies employed by each type of microbiota to adapt to its intestinal environment, suggesting that these gene sets encode the core functions of adult and infant-type gut microbiota. By analysing the orphan genes, 647 new gene families were identified to be exclusively present in human intestinal microbiomes. In addition, we discovered a conjugative transposon family explosively amplified in human gut microbiomes, which strongly suggests that the intestine is a ‘hot spot’ for horizontal gene transfer between microbes. PMID:17916580

Phylum Level Change in the Cecal and Fecal Gut Communities of Rats Fed Diets Containing Different Fermentable Substrates Supports a Role for Nitrogen as a Factor Contributing to Community Structure

PubMed Central

Kalmokoff, Martin; Franklin, Jeff; Petronella, Nicholas; Green, Judy; Brooks, Stephen P.J.

2015-01-01

Fermentation differs between the proximal and distal gut but little is known regarding how the bacterial communities differ or how they are influenced by diet. In order to investigate this, we compared community diversity in the cecum and feces of rats by 16S rRNA gene content and DNA shot gun metagenomics after feeding purified diets containing different fermentable substrates. Gut community composition was dependent on the source of fermentable substrate included in the diet. Cecal communities were dominated by Firmicutes, and contained a higher abundance of Lachnospiraceae compared to feces. In feces, community structure was shifted by varying degrees depending on diet towards the Bacteroidetes, although this change was not always evident from 16S rRNA gene data. Multi-dimensional scaling analysis (PCoA) comparing cecal and fecal metagenomes grouped by location within the gut rather than by diet, suggesting that factors in addition to substrate were important for community change in the distal gut. Differentially abundant genes in each environment supported this shift away from the Firmicutes in the cecum (e.g., motility) towards the Bacteroidetes in feces (e.g., Bacteroidales transposons). We suggest that this phylum level change reflects a shift to ammonia as the primary source of nitrogen used to support continued microbial growth in the distal gut. PMID:25954902

Phylum level change in the cecal and fecal gut communities of rats fed diets containing different fermentable substrates supports a role for nitrogen as a factor contributing to community structure.

PubMed

Kalmokoff, Martin; Franklin, Jeff; Petronella, Nicholas; Green, Judy; Brooks, Stephen P J

2015-05-06

Fermentation differs between the proximal and distal gut but little is known regarding how the bacterial communities differ or how they are influenced by diet. In order to investigate this, we compared community diversity in the cecum and feces of rats by 16S rRNA gene content and DNA shot gun metagenomics after feeding purified diets containing different fermentable substrates. Gut community composition was dependent on the source of fermentable substrate included in the diet. Cecal communities were dominated by Firmicutes, and contained a higher abundance of Lachnospiraceae compared to feces. In feces, community structure was shifted by varying degrees depending on diet towards the Bacteroidetes, although this change was not always evident from 16S rRNA gene data. Multi-dimensional scaling analysis (PCoA) comparing cecal and fecal metagenomes grouped by location within the gut rather than by diet, suggesting that factors in addition to substrate were important for community change in the distal gut. Differentially abundant genes in each environment supported this shift away from the Firmicutes in the cecum (e.g., motility) towards the Bacteroidetes in feces (e.g., Bacteroidales transposons). We suggest that this phylum level change reflects a shift to ammonia as the primary source of nitrogen used to support continued microbial growth in the distal gut.

On the extensive unification of digital-to-analog converters and kernels

NASA Astrophysics Data System (ADS)

Liao, Yanchu

2012-09-01

System administrators agree that scalable communication is an interesting new topic in the field of steganography, and leading analysts concur. After years of unfortunate re-search into context-free grammar, we argue the intuitive unification of fiber-optic cables and context-free grammar. Our focus here is not on whether sensor networks and randomized algorithms can collaborate to accomplish this aim, but rather on introducing an analysis of DHTs [2] (Soupy Coil).

THE COMMON MARKET AND EUROPEAN UNIFICATION,

DTIC Science & Technology

A study of the Common Market ; its past problems, current difficulties, and future possibilities are presented. The study consists of seven sections...each of which may be read independently: (1) an introduction to the Common Market ; (2) the Common Market and internal trade; (3) external economic...European Economic Community agriculture; and (7) the Common Market and European political unification. Statistical tables showing import and export data of the Common Market countries are appended. (Author)

Deductive Synthesis of the Unification Algorithm,

DTIC Science & Technology

1981-06-01

DEDUCTIVE SYNTHESIS OF THE I - UNIFICATION ALGORITHM Zohar Manna Richard Waldinger I F? Computer Science Department Artificial Intelligence Center...theorem proving," Artificial Intelligence Journal, Vol. 9, No. 1, pp. 1-35. Boyer, R. S. and J S. Moore [Jan. 19751, "Proving theorems about LISP...d’Intelligence Artificielle , U.E.R. de Luminy, Universit6 d’ Aix-Marseille II. Green, C. C. [May 1969], "Application of theorem proving to problem

The gut microbiome composition associates with bipolar disorder and illness severity.

PubMed

Evans, Simon J; Bassis, Christine M; Hein, Robert; Assari, Shervin; Flowers, Stephanie A; Kelly, Marisa B; Young, Vince B; Ellingrod, Vicky E; McInnis, Melvin G

2017-04-01

The gut microbiome is emerging as an important factor in regulating mental health yet it remains unclear what the target should be for psychiatric treatment. We aimed to elucidate the complement of the gut-microbiome community for individuals with bipolar disorder relative to controls; and test for relationships with burden of disease measures. We compared the stool microbiome from individuals with bipolar disorder (n = 115) and control subjects (n = 64) using 16S ribosomal RNA (rRNA) gene sequence analysis. Analysis of molecular variance (AMOVA) revealed global community case-control differences (AMOVA p = 0.047). Operational Taxonomical Unit (OTU) level analysis revealed significantly decreased fractional representation (p < 0.001) of Faecalibacterium after adjustment for age, sex, BMI and false discovery rate (FDR) correction at the p < 0.05 level. Within individuals with bipolar disorder, the fractional representation of Faecalibacterium associated with better self-reported health outcomes based on the Short Form Health Survey (SF12); the Patient Health Questionnaire (PHQ9); the Pittsburg Sleep Quality Index (PSQI); the Generalized Anxiety Disorder scale (GAD7); and the Altman Mania Rating Scale (ASRM), independent of covariates. This study provides the first detailed analysis of the gut microbiome relationships with multiple psychiatric domains from a bipolar population. The data support the hypothesis that targeting the microbiome may be an effective treatment paradigm for bipolar disorder. Copyright © 2016 Elsevier Ltd. All rights reserved.

Metaproteomics as a Complementary Approach to Gut Microbiota in Health and Disease

NASA Astrophysics Data System (ADS)

Petriz, Bernardo A.; Franco, Octávio L.

2017-01-01

Classic studies on phylotype profiling are limited to the identification of microbial constituents, where information is lacking about the molecular interaction of these bacterial communities with the host genome and the possible outcomes in host biology. A range of OMICs approaches have provided great progress linking the microbiota to health and disease. However, the investigation of this context through proteomic mass spectrometry-based tools is still being improved. Therefore, metaproteomics or community proteogenomics has emerged as a complementary approach to metagenomic data, as a field in proteomics aiming to perform large-scale characterization of proteins from environmental microbiota such as the human gut. The advances in molecular separation methods coupled with mass spectrometry (e.g. LC-MS/MS) and proteome bioinformatics have been fundamental in these novel large-scale metaproteomic studies, which have further been performed in a wide range of samples including soil, plant and human environments. Metaproteomic studies will make major progress if a comprehensive database covering the genes and expresses proteins from all gut microbial species is developed. To this end, we here present some of the main limitations of metaproteomic studies in complex microbiota environments such as the gut, also addressing the up-to-date pipelines in sample preparation prior to fractionation/separation and mass spectrometry analysis. In addition, a novel approach to the limitations of metagenomic databases is also discussed. Finally, prospects are addressed regarding the application of metaproteomic analysis using a unified host-microbiome gene database and other meta-OMICs platforms.

Modeling the small dark energy scale with a quintessential pseudoscalar boson

NASA Astrophysics Data System (ADS)

Kim, Jihn E.

2014-03-01

Democracy among the same type of particles is a useful paradigm in studying masses and interactions of particles with supersymmetry (SUSY) or without SUSY. This simple idea predicts the presence of massless particles. We attempt to use one of these massless pseudoscalar particles to generate the cosmological dark energy (DE) potential. To achieve the extremely shallow potential of DE, we require the pseudoscalar boson not couple to quantum chromodynamics (QCD) anomaly. Thus, we consider two pseudoscalars, one coupling to the QCD anomaly ( i.e., the QCD axion) and the other not coupling to the QCD anomaly. To obtain these two pseudoscalars, we introduce two approximate global U(1) symmetries to realize them as the pseudo-Goldstone bosons of the spontaneously broken U(1) symmetries. These global symmetries are dictated by a gravity-respecting discrete symmetry. Specifically, we consider an S 2( L) × S 2( R) × Z 10 R example and attempt to obtain the DE scale in terms of two observed fundamental mass scales, the grand unification scale M G and the electroweak scale υ ew.

The Rebirth of a World Power? German Unification and the Future of European Security

DTIC Science & Technology

1990-12-01

Government. 17 COSATI CODES 18 SUBJECT TERMS (Continue on reverse if necessary and identify by block number) FIELD GROUP SUB- GROUP German unification...in the balance of power system. Germany (and Prussia) was used as a territorial "shock absorber" to maintain a buffer between the great powers--a...European statecraft was not pressured by internal problems which later forced governments to take actions that aroused the suspicions and fears of the

North Korean Paradoxes. Circumstances, Costs, and Consequences of Korean Unification

DTIC Science & Technology

2005-01-01

consequences of Korean unification / Charles Wolf, Jr., Kamil Akramov. p. cm. "MG-333." Includes bibliographical references. ISBN 0-8330-3762-5 (pbk. : alk ...Institute of Technology NBER National Bureau for Economic Research OECD Organization for Economic Cooperation and Develoment OSD Office of the Secretary of...opment ( OECD ) with a per capita income over $10,000 and the other a "lights-out" but nuclear-capable dynastic state-is the riddle; how to link economic

Why is the supersymmetry breaking scale unnaturally high?

NASA Astrophysics Data System (ADS)

Feldstein, Brian; Yanagida, Tsutomu T.

2013-03-01

Evidence is mounting that natural supersymmetry at the weak scale is not realized in nature. On the other hand, string theory suggests that supersymmetry may be present at some energy scale, and gauge coupling unification implies that energy scale may be relatively low. A puzzling question is then why nature would prefer a low, but not completely natural supersymmetry breaking scale. Here we offer one possible explanation, which simultaneously addresses also the strong CP and μ problems. We introduce an axion, and suppose that the Peccei-Quinn and supersymmetry breaking scales are connected. If we further assume that R-parity is not conserved, then the axion is required to be dark matter, and the Peccei-Quinn/supersymmetry breaking scale is required to be at least ˜1012 GeV. Gravity mediation then yields scalar superpartners with masses of at least ˜ 100 TeV. The gauginos are likely to obtain loop-factor suppressed masses through anomaly mediation and higgsino threshold corrections, and thus may be accessible at the LHC. The axion should be probed at phase II of the ADMX experiment, and signs of R-parity violation may be seen in the properties of the gauginos.

Microbiota-based treatments in alcoholic liver disease.

PubMed

Sung, Hotaik; Kim, Seung Woo; Hong, Meegun; Suk, Ki Tae

2016-08-07

Gut microbiota plays a key role in the pathogenesis of alcoholic liver disease (ALD). Consumption of alcohol leads to increased gut permeability, small intestinal bacterial overgrowth, and enteric dysbiosis. These factors contribute to the increased translocation of microbial products to the liver via the portal tract. Subsequently, bacterial endotoxins such as lipopolysaccharide, in association with the Toll-like receptor 4 signaling pathway, induce a gamut of damaging immune responses in the hepatic milieu. Because of the close association between deleterious inflammation and ALD-induced microbiota imbalance, therapeutic approaches that seek to reestablish gut homeostasis should be considered in the treatment of alcoholic patients. To this end, a number of preliminary studies on probiotics have confirmed their effectiveness in suppressing proinflammatory cytokines and improving liver function in the context of ALD. In addition, there have been few studies linking the administration of prebiotics and antibiotics with reduction of alcohol-induced liver damage. Because these preliminary results are promising, large-scale randomized studies are warranted to elucidate the impact of these microbiota-based treatments on the gut flora and associated immune responses, in addition to exploring questions about optimal delivery. Finally, fecal microbiota transplant has been shown to be an effective method of modulating gut microbiota and deserve further investigation as a potential therapeutic option for ALD.

The human microbiome and bile acid metabolism: dysbiosis, dysmetabolism, disease and intervention.

PubMed

Jones, Mitchell L; Martoni, Christopher J; Ganopolsky, Jorge G; Labbé, Alain; Prakash, Satya

2014-04-01

Recent evidence indicates that the human gut microbiome plays a significant role in health and disease. Dysbiosis, defined as a pathological imbalance in a microbial community, is becoming increasingly appreciated as a 'central environmental factor' that is both associated with complex phenotypes and affected by host genetics, diet and antibiotic use. More recently, a link has been established between the dysmetabolism of bile acids (BAs) in the gut to dysbiosis. BAs, which are transformed by the gut microbiota, have been shown to regulate intestinal homeostasis and are recognized as signaling molecules in a wide range of metabolic processes. This review will examine the connection between BA metabolism as it relates to the gut microbiome and its implication in health and disease. A disrupted gut microbiome, including a reduction of bile salt hydrolase (BSH)-active bacteria, can significantly impair the metabolism of BAs and may result in an inability to maintain glucose homeostasis as well as normal cholesterol breakdown and excretion. To better understand the link between dysbiosis, BA dysmetabolism and chronic degenerative disease, large-scale metagenomic sequencing studies, metatranscriptomics, metaproteomics and metabolomics should continue to catalog functional diversity in the gastrointestinal tract of both healthy and diseased populations. Further, BSH-active probiotics should continue to be explored as treatment options to help restore metabolic levels.

The gut microbiota modulates host amino acid and glutathione metabolism in mice

PubMed Central

Mardinoglu, Adil; Shoaie, Saeed; Bergentall, Mattias; Ghaffari, Pouyan; Zhang, Cheng; Larsson, Erik; Bäckhed, Fredrik; Nielsen, Jens

2015-01-01

The gut microbiota has been proposed as an environmental factor that promotes the progression of metabolic diseases. Here, we investigated how the gut microbiota modulates the global metabolic differences in duodenum, jejunum, ileum, colon, liver, and two white adipose tissue depots obtained from conventionally raised (CONV-R) and germ-free (GF) mice using gene expression data and tissue-specific genome-scale metabolic models (GEMs). We created a generic mouse metabolic reaction (MMR) GEM, reconstructed 28 tissue-specific GEMs based on proteomics data, and manually curated GEMs for small intestine, colon, liver, and adipose tissues. We used these functional models to determine the global metabolic differences between CONV-R and GF mice. Based on gene expression data, we found that the gut microbiota affects the host amino acid (AA) metabolism, which leads to modifications in glutathione metabolism. To validate our predictions, we measured the level of AAs and N-acetylated AAs in the hepatic portal vein of CONV-R and GF mice. Finally, we simulated the metabolic differences between the small intestine of the CONV-R and GF mice accounting for the content of the diet and relative gene expression differences. Our analyses revealed that the gut microbiota influences host amino acid and glutathione metabolism in mice. PMID:26475342

Microbiota-based treatments in alcoholic liver disease

PubMed Central

Sung, Hotaik; Kim, Seung Woo; Hong, Meegun; Suk, Ki Tae

2016-01-01

Gut microbiota plays a key role in the pathogenesis of alcoholic liver disease (ALD). Consumption of alcohol leads to increased gut permeability, small intestinal bacterial overgrowth, and enteric dysbiosis. These factors contribute to the increased translocation of microbial products to the liver via the portal tract. Subsequently, bacterial endotoxins such as lipopolysaccharide, in association with the Toll-like receptor 4 signaling pathway, induce a gamut of damaging immune responses in the hepatic milieu. Because of the close association between deleterious inflammation and ALD-induced microbiota imbalance, therapeutic approaches that seek to reestablish gut homeostasis should be considered in the treatment of alcoholic patients. To this end, a number of preliminary studies on probiotics have confirmed their effectiveness in suppressing proinflammatory cytokines and improving liver function in the context of ALD. In addition, there have been few studies linking the administration of prebiotics and antibiotics with reduction of alcohol-induced liver damage. Because these preliminary results are promising, large-scale randomized studies are warranted to elucidate the impact of these microbiota-based treatments on the gut flora and associated immune responses, in addition to exploring questions about optimal delivery. Finally, fecal microbiota transplant has been shown to be an effective method of modulating gut microbiota and deserve further investigation as a potential therapeutic option for ALD. PMID:27547010

Gut microbiome composition is associated with temperament during early childhood

PubMed Central

Christian, Lisa M.; Galley, Jeffrey D.; Hade, Erinn M.; Schoppe-Sullivan, Sarah; Kamp-Dush, Claire; Bailey, Michael T.

2014-01-01

Background Understanding the dynamics of the gut-brain axis has clinical implications for physical and mental health conditions, including obesity and anxiety. As such disorders have early life antecedents, it is of value to determine if associations between the gut microbiome and behavior are present in early life in humans. Methods We used next generation pyrosequencing to examine associations between the community structure of the gut microbiome and maternal ratings of child temperament in 77 children at 18-27 months of age. It was hypothesized that children would differ in their gut microbial structure, as indicated by measures of alpha and beta diversity, based on their temperamental characteristics. Results Among both boys and girls, greater Surgency/Extraversion was associated greater phylogenetic diversity. In addition, among boys only, subscales loading on this composite scale were associated with differences in phylogenetic diversity, the Shannon Diversity index (SDI), beta diversity, and differences in abundances of Dialister, Rikenellaceae, Ruminococcaceae, and Parabacteroides. In girls only, higher Effortful Control was associated with a lower SDI score and differences in both beta diversity and Rikenellaceae were observed in relation to Fear. Some differences in dietary patterns were observed in relation to temperament, but these did not account for the observed differences in the microbiome. Conclusions Differences in gut microbiome composition, including alpha diversity, beta diversity, and abundances of specific bacterial species, were observed in association with temperament in toddlers. This study was cross-sectional and observational and, therefore, does not permit determination of the causal direction of effects. However, if bidirectional brain-gut relationships are present in humans in early life, this may represent an opportunity for intervention relevant to physical as well as mental health disorders. PMID:25449582

The Bamboo-Eating Giant Panda Harbors a Carnivore-Like Gut Microbiota, with Excessive Seasonal Variations

PubMed Central

Xue, Zhengsheng; Zhang, Wenping; Wang, Linghua; Hou, Rong; Zhang, Menghui; Fei, Lisong; Zhang, Xiaojun; Huang, He; Bridgewater, Laura C.; Jiang, Yi; Jiang, Chenglin; Zhao, Liping

2015-01-01

ABSTRACT The giant panda evolved from omnivorous bears. It lives on a bamboo-dominated diet at present, but it still retains a typical carnivorous digestive system and is genetically deficient in cellulose-digesting enzymes. To find out whether this endangered mammalian species, like other herbivores, has successfully developed a gut microbiota adapted to its fiber-rich diet, we conducted a 16S rRNA gene-based large-scale structural profiling of the giant panda fecal microbiota. Forty-five captive individuals were sampled in spring, summer, and late autumn within 1 year. Significant intraindividual variations in the diversity and structure of gut microbiota across seasons were observed in this population, which were even greater than the variations between individuals. Compared with published data sets involving 124 gut microbiota profiles from 54 mammalian species, these giant pandas, together with 9 captive and 7 wild individuals investigated previously, showed extremely low gut microbiota diversity and an overall structure that diverged from those of nonpanda herbivores but converged with those of carnivorous and omnivorous bears. The giant panda did not harbor putative cellulose-degrading phylotypes such as Ruminococcaceae and Bacteroides bacteria that are typically enriched in other herbivores, but instead, its microbiota was dominated by Escherichia/Shigella and Streptococcus bacteria. Members of the class Clostridia were common and abundant in the giant panda gut microbiota, but most of the members present were absent in other herbivores and were not phylogenetically related with known cellulolytic lineages. Therefore, the giant panda appears not to have evolved a gut microbiota compatible with its newly adopted diet, which may adversely influence the coevolutionary fitness of this herbivore. PMID:25991678

The gut microbiota and host health: a new clinical frontier

PubMed Central

Marchesi, Julian R; Adams, David H; Fava, Francesca; Hermes, Gerben D A; Hirschfield, Gideon M; Hold, Georgina; Quraishi, Mohammed Nabil; Kinross, James; Smidt, Hauke; Tuohy, Kieran M; Thomas, Linda V; Zoetendal, Erwin G; Hart, Ailsa

2016-01-01

Over the last 10–15 years, our understanding of the composition and functions of the human gut microbiota has increased exponentially. To a large extent, this has been due to new ‘omic’ technologies that have facilitated large-scale analysis of the genetic and metabolic profile of this microbial community, revealing it to be comparable in influence to a new organ in the body and offering the possibility of a new route for therapeutic intervention. Moreover, it might be more accurate to think of it like an immune system: a collection of cells that work in unison with the host and that can promote health but sometimes initiate disease. This review gives an update on the current knowledge in the area of gut disorders, in particular metabolic syndrome and obesity-related disease, liver disease, IBD and colorectal cancer. The potential of manipulating the gut microbiota in these disorders is assessed, with an examination of the latest and most relevant evidence relating to antibiotics, probiotics, prebiotics, polyphenols and faecal microbiota transplantation. PMID:26338727

The scientific data acquisition system of the GAMMA-400 space project

NASA Astrophysics Data System (ADS)

Bobkov, S. G.; Serdin, O. V.; Gorbunov, M. S.; Arkhangelskiy, A. I.; Topchiev, N. P.

2016-02-01

The description of scientific data acquisition system (SDAS) designed by SRISA for the GAMMA-400 space project is presented. We consider the problem of different level electronics unification: the set of reliable fault-tolerant integrated circuits fabricated on Silicon-on-Insulator 0.25 mkm CMOS technology and the high-speed interfaces and reliable modules used in the space instruments. The characteristics of reliable fault-tolerant very large scale integration (VLSI) technology designed by SRISA for the developing of computation systems for space applications are considered. The scalable net structure of SDAS based on Serial RapidIO interface including real-time operating system BAGET is described too.

Soft CP violation and the global matter-antimatter symmetry of the universe

NASA Technical Reports Server (NTRS)

Senjanovic, G.; Stecker, F. W.

1980-01-01

Scenarios for baryon production are considered within the context of SU(5) and SO(10) grand unified theories where CP violation arises spontaneously. The spontaneous CP symmetry breaking then results in a matter-antimatter domain structure in the universe. Two possible, distinct types of theories of soft CP violation are defined. In the first type the CP nonconservation originates only from the breaking of SU(2) sub L X U(1) symmetry, and in the second type, even at the unification temperature scale, CP violation can emerge as a result of symmetry breaking by the vacuum expectation values of the superheavy Higgs sector scalars.

Explaining the Supernova Data Without Accelerating Expansion

NASA Astrophysics Data System (ADS)

Stuckey, W. M.; McDevitt, T. J.; Silberstein, M.

2012-10-01

The 2011 Nobel Prize in Physics was awarded "for the discovery of the accelerating expansion of the universe through observations of distant supernovae." However, it is not the case that the type Ia supernova data necessitates accelerating expansion. Since we do not have a successful theory of quantum gravity, we should not assume general relativity (GR) will survive unification intact, especially on cosmological scales where tests are scarce. We provide a simple example of how GR cosmology may be modified to produce a decelerating Einstein-de Sitter cosmology (EdS) that accounts for the Union2 Compilation data as well as the accelerating ΛCDM (EdS plus a cosmological constant).

Exascale computing and big data

DOE PAGES

Reed, Daniel A.; Dongarra, Jack

2015-06-25

Scientific discovery and engineering innovation requires unifying traditionally separated high-performance computing and big data analytics. The tools and cultures of high-performance computing and big data analytics have diverged, to the detriment of both; unification is essential to address a spectrum of major research domains. The challenges of scale tax our ability to transmit data, compute complicated functions on that data, or store a substantial part of it; new approaches are required to meet these challenges. Finally, the international nature of science demands further development of advanced computer architectures and global standards for processing data, even as international competition complicates themore » openness of the scientific process.« less

Exascale computing and big data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reed, Daniel A.; Dongarra, Jack

Scientific discovery and engineering innovation requires unifying traditionally separated high-performance computing and big data analytics. The tools and cultures of high-performance computing and big data analytics have diverged, to the detriment of both; unification is essential to address a spectrum of major research domains. The challenges of scale tax our ability to transmit data, compute complicated functions on that data, or store a substantial part of it; new approaches are required to meet these challenges. Finally, the international nature of science demands further development of advanced computer architectures and global standards for processing data, even as international competition complicates themore » openness of the scientific process.« less

Graph Unification and Tangram Hypothesis Explanation Representation (GATHER) and System and Component Modeling Framework (SCMF)

DTIC Science & Technology

2008-08-01

services, DIDS and DMS, are deployable on the TanGrid system and are accessible via two APIs, a Java client and a servlet based interface. Additionally...but required the user to instantiate an IGraph object with several Java Maps containing the nodes, node attributes, edge types, and the connections...restrictions imposed by the bulk ingest process. Finally, once the bulk ingest process was available in the GraphUnification Java Archives (JAR), DC was

Unification of Electromagnetic Specifications and Standards. Part 2. Recommendations for Revisions of Existing Practices

DTIC Science & Technology

1983-02-28

tire, .v ,.,, DNA 5433F-2 I 1 UNIFICATION OF ELECTROMAGNETIC -’, SPECIFICATIONS AND STANDARDS Part Ih: Recommendations for Revisions of Existing...ADDRESSEE IS NO LONGER EMPLOYED BY" "• YOUR ORGANIZATION. ... : 1 ,S ::! ,.S ., UNCLASSIFIED SECURITY CLASSIFICATION OF THIS PAGE (When D.e. 6.e1e..c...REPORT DOCUMENTATION PAGE BEFORE COMPETISRM 1 . REPORT NUMBER 2. GOVT ACCESSION NO. 3. RECIPIENT’S CATALOG NUMBER DNA 5433F-2 1 /f9 I;’,71 4. TITLE

Distinct signals of the gauge-Higgs unification in e+e- collider experiments

NASA Astrophysics Data System (ADS)

Funatsu, Shuichiro; Hatanaka, Hisaki; Hosotani, Yutaka; Orikasa, Yuta

2017-12-01

Effects of Kaluza-Klein excited neutral vector bosons (Z‧ bosons) in the gauge-Higgs unification on e+e- → q bar q ,ℓ+ℓ- cross sections are studied, particularly in future e+e- collider experiments with polarized beams. Significant deviations in the energy and polarization dependence in σ (μ+μ-), the lepton forward-backward asymmetry, Rb (μ) ≡ σ (b bar b) / σ (μ+μ-) and the left-right asymmetry from the standard model are predicted.

Homeostasis of the gut barrier and potential biomarkers.

PubMed

Wells, Jerry M; Brummer, Robert J; Derrien, Muriel; MacDonald, Thomas T; Troost, Freddy; Cani, Patrice D; Theodorou, Vassilia; Dekker, Jan; Méheust, Agnes; de Vos, Willem M; Mercenier, Annick; Nauta, Arjen; Garcia-Rodenas, Clara L

2017-03-01

The gut barrier plays a crucial role by spatially compartmentalizing bacteria to the lumen through the production of secreted mucus and is fortified by the production of secretory IgA (sIgA) and antimicrobial peptides and proteins. With the exception of sIgA, expression of these protective barrier factors is largely controlled by innate immune recognition of microbial molecular ligands. Several specialized adaptations and checkpoints are operating in the mucosa to scale the immune response according to the threat and prevent overreaction to the trillions of symbionts inhabiting the human intestine. A healthy microbiota plays a key role influencing epithelial barrier functions through the production of short-chain fatty acids (SCFAs) and interactions with innate pattern recognition receptors in the mucosa, driving the steady-state expression of mucus and antimicrobial factors. However, perturbation of gut barrier homeostasis can lead to increased inflammatory signaling, increased epithelial permeability, and dysbiosis of the microbiota, which are recognized to play a role in the pathophysiology of a variety of gastrointestinal disorders. Additionally, gut-brain signaling may be affected by prolonged mucosal immune activation, leading to increased afferent sensory signaling and abdominal symptoms. In turn, neuronal mechanisms can affect the intestinal barrier partly by activation of the hypothalamus-pituitary-adrenal axis and both mast cell-dependent and mast cell-independent mechanisms. The modulation of gut barrier function through nutritional interventions, including strategies to manipulate the microbiota, is considered a relevant target for novel therapeutic and preventive treatments against a range of diseases. Several biomarkers have been used to measure gut permeability and loss of barrier integrity in intestinal diseases, but there remains a need to explore their use in assessing the effect of nutritional factors on gut barrier function. Future studies should aim to establish normal ranges of available biomarkers and their predictive value for gut health in human cohorts. Copyright © 2017 the American Physiological Society.

Like will to like: abundances of closely related species can predict susceptibility to intestinal colonization by pathogenic and commensal bacteria.

PubMed

Stecher, Bärbel; Chaffron, Samuel; Käppeli, Rina; Hapfelmeier, Siegfried; Freedrich, Susanne; Weber, Thomas C; Kirundi, Jorum; Suar, Mrutyunjay; McCoy, Kathy D; von Mering, Christian; Macpherson, Andrew J; Hardt, Wolf-Dietrich

2010-01-01

The intestinal ecosystem is formed by a complex, yet highly characteristic microbial community. The parameters defining whether this community permits invasion of a new bacterial species are unclear. In particular, inhibition of enteropathogen infection by the gut microbiota ( = colonization resistance) is poorly understood. To analyze the mechanisms of microbiota-mediated protection from Salmonella enterica induced enterocolitis, we used a mouse infection model and large scale high-throughput pyrosequencing. In contrast to conventional mice (CON), mice with a gut microbiota of low complexity (LCM) were highly susceptible to S. enterica induced colonization and enterocolitis. Colonization resistance was partially restored in LCM-animals by co-housing with conventional mice for 21 days (LCM(con21)). 16S rRNA sequence analysis comparing LCM, LCM(con21) and CON gut microbiota revealed that gut microbiota complexity increased upon conventionalization and correlated with increased resistance to S. enterica infection. Comparative microbiota analysis of mice with varying degrees of colonization resistance allowed us to identify intestinal ecosystem characteristics associated with susceptibility to S. enterica infection. Moreover, this system enabled us to gain further insights into the general principles of gut ecosystem invasion by non-pathogenic, commensal bacteria. Mice harboring high commensal E. coli densities were more susceptible to S. enterica induced gut inflammation. Similarly, mice with high titers of Lactobacilli were more efficiently colonized by a commensal Lactobacillus reuteri(RR) strain after oral inoculation. Upon examination of 16S rRNA sequence data from 9 CON mice we found that closely related phylotypes generally display significantly correlated abundances (co-occurrence), more so than distantly related phylotypes. Thus, in essence, the presence of closely related species can increase the chance of invasion of newly incoming species into the gut ecosystem. We provide evidence that this principle might be of general validity for invasion of bacteria in preformed gut ecosystems. This might be of relevance for human enteropathogen infections as well as therapeutic use of probiotic commensal bacteria.

Homeostasis of the gut barrier and potential biomarkers

PubMed Central

Brummer, Robert J.; Derrien, Muriel; MacDonald, Thomas T.; Troost, Freddy; Cani, Patrice D.; Theodorou, Vassilia; Dekker, Jan; Méheust, Agnes; de Vos, Willem M.; Mercenier, Annick; Nauta, Arjen; Garcia-Rodenas, Clara L.

2017-01-01

The gut barrier plays a crucial role by spatially compartmentalizing bacteria to the lumen through the production of secreted mucus and is fortified by the production of secretory IgA (sIgA) and antimicrobial peptides and proteins. With the exception of sIgA, expression of these protective barrier factors is largely controlled by innate immune recognition of microbial molecular ligands. Several specialized adaptations and checkpoints are operating in the mucosa to scale the immune response according to the threat and prevent overreaction to the trillions of symbionts inhabiting the human intestine. A healthy microbiota plays a key role influencing epithelial barrier functions through the production of short-chain fatty acids (SCFAs) and interactions with innate pattern recognition receptors in the mucosa, driving the steady-state expression of mucus and antimicrobial factors. However, perturbation of gut barrier homeostasis can lead to increased inflammatory signaling, increased epithelial permeability, and dysbiosis of the microbiota, which are recognized to play a role in the pathophysiology of a variety of gastrointestinal disorders. Additionally, gut-brain signaling may be affected by prolonged mucosal immune activation, leading to increased afferent sensory signaling and abdominal symptoms. In turn, neuronal mechanisms can affect the intestinal barrier partly by activation of the hypothalamus-pituitary-adrenal axis and both mast cell-dependent and mast cell-independent mechanisms. The modulation of gut barrier function through nutritional interventions, including strategies to manipulate the microbiota, is considered a relevant target for novel therapeutic and preventive treatments against a range of diseases. Several biomarkers have been used to measure gut permeability and loss of barrier integrity in intestinal diseases, but there remains a need to explore their use in assessing the effect of nutritional factors on gut barrier function. Future studies should aim to establish normal ranges of available biomarkers and their predictive value for gut health in human cohorts. PMID:27908847

Longer guts and higher food quality increase energy intake in migratory swans.

PubMed

van Gils, Jan A; Beekman, Jan H; Coehoorn, Pieter; Corporaal, Els; Dekkers, Ten; Klaassen, Marcel; van Kraaij, Rik; de Leeuw, Rinze; de Vries, Peter P

2008-11-01

1. Within the broad field of optimal foraging, it is increasingly acknowledged that animals often face digestive constraints rather than constraints on rates of food collection. This therefore calls for a formalization of how animals could optimize food absorption rates. 2. Here we generate predictions from a simple graphical optimal digestion model for foragers that aim to maximize their (true) metabolizable food intake over total time (i.e. including nonforaging bouts) under a digestive constraint. 3. The model predicts that such foragers should maintain a constant food retention time, even if gut length or food quality changes. For phenotypically flexible foragers, which are able to change the size of their digestive machinery, this means that an increase in gut length should go hand in hand with an increase in gross intake rate. It also means that better quality food should be digested more efficiently. 4. These latter two predictions are tested in a large avian long-distance migrant, the Bewick's swan (Cygnus columbianus bewickii), feeding on grasslands in its Dutch wintering quarters. 5. Throughout winter, free-ranging Bewick's swans, growing a longer gut and experiencing improved food quality, increased their gross intake rate (i.e. bite rate) and showed a higher digestive efficiency. These responses were in accordance with the model and suggest maintenance of a constant food retention time. 6. These changes doubled the birds' absorption rate. Had only food quality changed (and not gut length), then absorption rate would have increased by only 67%; absorption rate would have increased by only 17% had only gut length changed (and not food quality). 7. The prediction that gross intake rate should go up with gut length parallels the mechanism included in some proximate models of foraging that feeding motivation scales inversely to gut fullness. We plea for a tighter integration between ultimate and proximate foraging models.

Realising effective theories of tribrid inflation: are there effects from messenger fields?

NASA Astrophysics Data System (ADS)

Antusch, Stefan; Nolde, David

2015-09-01

Tribrid inflation is a variant of supersymmetric hybrid inflation in which the inflaton is a matter field (which can be charged under gauge symmetries) and inflation ends by a GUT-scale phase transition of a waterfall field. These features make tribrid inflation a promising framework for realising inflation with particularly close connections to particle physics. Superpotentials of tribrid inflation involve effective operators suppressed by some cutoff scale, which is often taken as the Planck scale. However, these operators may also be generated by integrating out messenger superfields with masses below the Planck scale, which is in fact quite common in GUT and/or flavour models. The values of the inflaton field during inflation can then lie above this mass scale, which means that for reliably calculating the model predictions one has to go beyond the effective theory description. We therefore discuss realisations of effective theories of tribrid inflation and specify in which cases effects from the messenger fields are expected, and under which conditions they can safely be neglected. In particular, we point out how to construct realisations where, despite the fact that the inflaton field values are above the messenger mass scale, the predictions for the observables are (to a good approximation) identical to the ones calculated in the effective theory treatment where the messenger mass scale is identified with the (apparent) cutoff scale.

Late-time cosmological phase transitions

NASA Technical Reports Server (NTRS)

Schramm, David N.

1991-01-01

It is shown that the potential galaxy formation and large scale structure problems of objects existing at high redshifts (Z approx. greater than 5), structures existing on scales of 100 M pc as well as velocity flows on such scales, and minimal microwave anisotropies ((Delta)T/T) (approx. less than 10(exp -5)) can be solved if the seeds needed to generate structure form in a vacuum phase transition after decoupling. It is argued that the basic physics of such a phase transition is no more exotic than that utilized in the more traditional GUT scale phase transitions, and that, just as in the GUT case, significant random Gaussian fluctuations and/or topological defects can form. Scale lengths of approx. 100 M pc for large scale structure as well as approx. 1 M pc for galaxy formation occur naturally. Possible support for new physics that might be associated with such a late-time transition comes from the preliminary results of the SAGE solar neutrino experiment, implying neutrino flavor mixing with values similar to those required for a late-time transition. It is also noted that a see-saw model for the neutrino masses might also imply a tau neutrino mass that is an ideal hot dark matter candidate. However, in general either hot or cold dark matter can be consistent with a late-time transition.

Superresolution Imaging Captures Carbohydrate Utilization Dynamics in Human Gut Symbionts

PubMed Central

Karunatilaka, Krishanthi S.; Cameron, Elizabeth A.; Martens, Eric C.; Koropatkin, Nicole M.

2014-01-01

ABSTRACT Gut microbes play a key role in human health and nutrition by catabolizing a wide variety of glycans via enzymatic activities that are not encoded in the human genome. The ability to recognize and process carbohydrates strongly influences the structure of the gut microbial community. While the effects of diet on the microbiota are well documented, little is known about the molecular processes driving metabolism. To provide mechanistic insight into carbohydrate catabolism in gut symbionts, we studied starch processing in real time in the model Bacteroides thetaiotaomicron starch utilization system (Sus) by single-molecule fluorescence. Although previous studies have explored Sus protein structure and function, the transient interactions, assembly, and collaboration of these outer membrane proteins have not yet been elucidated in live cells. Our live-cell superresolution imaging reveals that the polymeric starch substrate dynamically recruits Sus proteins, serving as an external scaffold for bacterial membrane assembly of the Sus complex, which may promote efficient capturing and degradation of starch. Furthermore, by simultaneously localizing multiple Sus outer membrane proteins on the B. thetaiotaomicron cell surface, we have characterized the dynamics and stoichiometry of starch-induced Sus complex assembly on the molecular scale. Finally, based on Sus protein knockout strains, we have discerned the mechanism of starch-induced Sus complex assembly in live anaerobic cells with nanometer-scale resolution. Our insights into the starch-induced outer membrane protein assembly central to this conserved nutrient uptake mechanism pave the way for the development of dietary or pharmaceutical therapies to control Bacteroidetes in the intestinal tract to enhance human health and treat disease. PMID:25389179

Spatial organization of a model 15-member human gut microbiota established in gnotobiotic mice

PubMed Central

Mark Welch, Jessica L.; Hasegawa, Yuko; McNulty, Nathan P.; Gordon, Jeffrey I.; Borisy, Gary G.

2017-01-01

Knowledge of the spatial organization of the gut microbiota is important for understanding the physical and molecular interactions among its members. These interactions are thought to influence microbial succession, community stability, syntrophic relationships, and resiliency in the face of perturbations. The complexity and dynamism of the gut microbiota pose considerable challenges for quantitative analysis of its spatial organization. Here, we illustrate an approach for addressing this challenge, using (i) a model, defined 15-member consortium of phylogenetically diverse, sequenced human gut bacterial strains introduced into adult gnotobiotic mice fed a polysaccharide-rich diet, and (ii) in situ hybridization and spectral imaging analysis methods that allow simultaneous detection of multiple bacterial strains at multiple spatial scales. Differences in the binding affinities of strains for substrates such as mucus or food particles, combined with more rapid replication in a preferred microhabitat, could, in principle, lead to localized clonally expanded aggregates composed of one or a few taxa. However, our results reveal a colonic community that is mixed at micrometer scales, with distinct spatial distributions of some taxa relative to one another, notably at the border between the mucosa and the lumen. Our data suggest that lumen and mucosa in the proximal colon should be conceptualized not as stratified compartments but as components of an incompletely mixed bioreactor. Employing the experimental approaches described should allow direct tests of whether and how specified host and microbial factors influence the nature and functional contributions of “microscale” mixing to the dynamic operations of the microbiota in health and disease. PMID:29073107

Introduction of an agent-based multi-scale modular architecture for dynamic knowledge representation of acute inflammation.

PubMed

An, Gary

2008-05-27

One of the greatest challenges facing biomedical research is the integration and sharing of vast amounts of information, not only for individual researchers, but also for the community at large. Agent Based Modeling (ABM) can provide a means of addressing this challenge via a unifying translational architecture for dynamic knowledge representation. This paper presents a series of linked ABMs representing multiple levels of biological organization. They are intended to translate the knowledge derived from in vitro models of acute inflammation to clinically relevant phenomenon such as multiple organ failure. ABM development followed a sequence starting with relatively direct translation from in-vitro derived rules into a cell-as-agent level ABM, leading on to concatenated ABMs into multi-tissue models, eventually resulting in topologically linked aggregate multi-tissue ABMs modeling organ-organ crosstalk. As an underlying design principle organs were considered to be functionally composed of an epithelial surface, which determined organ integrity, and an endothelial/blood interface, representing the reaction surface for the initiation and propagation of inflammation. The development of the epithelial ABM derived from an in-vitro model of gut epithelial permeability is described. Next, the epithelial ABM was concatenated with the endothelial/inflammatory cell ABM to produce an organ model of the gut. This model was validated against in-vivo models of the inflammatory response of the gut to ischemia. Finally, the gut ABM was linked to a similarly constructed pulmonary ABM to simulate the gut-pulmonary axis in the pathogenesis of multiple organ failure. The behavior of this model was validated against in-vivo and clinical observations on the cross-talk between these two organ systems. A series of ABMs are presented extending from the level of intracellular mechanism to clinically observed behavior in the intensive care setting. The ABMs all utilize cell-level agents that encapsulate specific mechanistic knowledge extracted from in vitro experiments. The execution of the ABMs results in a dynamic representation of the multi-scale conceptual models derived from those experiments. These models represent a qualitative means of integrating basic scientific information on acute inflammation in a multi-scale, modular architecture as a means of conceptual model verification that can potentially be used to concatenate, communicate and advance community-wide knowledge.

Natural tuning: towards a proof of concept

NASA Astrophysics Data System (ADS)

Dubovsky, Sergei; Gorbenko, Victor; Mirbabayi, Mehrdad

2013-09-01

The cosmological constant problem and the absence of new natural physics at the electroweak scale, if confirmed by the LHC, may either indicate that the nature is fine-tuned or that a refined notion of naturalness is required. We construct a family of toy UV complete quantum theories providing a proof of concept for the second possibility. Low energy physics is described by a tuned effective field theory, which exhibits relevant interactions not protected by any symmetries and separated by an arbitrary large mass gap from the new "gravitational" physics, represented by a set of irrelevant operators. Nevertheless, the only available language to describe dynamics at all energy scales does not require any fine-tuning. The interesting novel feature of this construction is that UV physics is not described by a fixed point, but rather exhibits asymptotic fragility. Observation of additional unprotected scalars at the LHC would be a smoking gun for this scenario. Natural tuning also favors TeV scale unification.

SO(10) supersymmetric grand unified theories

NASA Astrophysics Data System (ADS)

Dermisek, Radovan

The origin of the fermion mass hierarchy is one of the most challenging problems in elementary particle physics. In the standard model fermion masses and mixing angles are free parameters. Supersymmetric grand unified theories provide a beautiful framework for physics beyond the standard model. In addition to gauge coupling unification these theories provide relations between quark and lepton masses within families, and with additional family symmetry the hierarchy between families can be generated. We present a predictive SO(10) supersymmetric grand unified model with D 3 x U(1) family symmetry. The hierarchy in fermion masses is generated by the family symmetry breaking D 3 x U(1) → ZN → nothing. This model fits the low energy data in the charged fermion sector quite well. We discuss the prediction of this model for the proton lifetime in light of recent SuperKamiokande results and present a clear picture of the allowed spectra of supersymmetric particles. Finally, the detailed discussion of the Yukawa coupling unification of the third generation particles is provided. We find a narrow region is consistent with t, b, tau Yukawa unification for mu > 0 (suggested by b → sgamma and the anomalous magnetic moment of the muon) with A0 ˜ -1.9m16, m10 ˜ 1.4m16, m16 ≳ 1200 GeV and mu, M1/2 ˜ 100--500 GeV. Demanding Yukawa unification thus makes definite predictions for Higgs and sparticle masses.

Pushing HTCondor and glideinWMS to 200K+ Jobs in a Global Pool for CMS before Run 2

NASA Astrophysics Data System (ADS)

Balcas, J.; Belforte, S.; Bockelman, B.; Gutsche, O.; Khan, F.; Larson, K.; Letts, J.; Mascheroni, M.; Mason, D.; McCrea, A.; Saiz-Santos, M.; Sfiligoi, I.

2015-12-01

The CMS experiment at the LHC relies on HTCondor and glideinWMS as its primary batch and pilot-based Grid provisioning system. So far we have been running several independent resource pools, but we are working on unifying them all to reduce the operational load and more effectively share resources between various activities in CMS. The major challenge of this unification activity is scale. The combined pool size is expected to reach 200K job slots, which is significantly bigger than any other multi-user HTCondor based system currently in production. To get there we have studied scaling limitations in our existing pools, the biggest of which tops out at about 70K slots, providing valuable feedback to the development communities, who have responded by delivering improvements which have helped us reach higher and higher scales with more stability. We have also worked on improving the organization and support model for this critical service during Run 2 of the LHC. This contribution will present the results of the scale testing and experiences from the first months of running the Global Pool.

Microbiome restoration diet improves digestion, cognition and physical and emotional wellbeing.

PubMed

Lawrence, Kate; Hyde, Jeannette

2017-01-01

Manipulating gut bacteria in the microbiome, through the use of probiotics and prebiotics, has been found to have an influence on both physical and emotional wellbeing. This study uses a dietary manipulation 'The Gut Makeover' designed to elicit positive changes to the gut bacteria within the microbiome. 21 healthy participants undertook 'The Gut Makeover' for a four week period. Weight and various aspects of health were assessed pre and post intervention using the Functional Medicine Medical Symptoms Questionnaire (MSQ). Paired sample t-tests revealed a significant reduction in self-reported weight at the end of the intervention. Adverse medical symptoms related to digestion, cognition and physical and emotional wellbeing, were also significantly reduced during the course of the dietary intervention. The intervention, designed to manipulate gut bacteria, had a significant impact on digestion, reducing IBS type symptoms in this non-clinical population. There was also a striking reduction in negative symptoms related to cognition, memory and emotional wellbeing, including symptoms of anxiety and depression. Dietary gut microbiome manipulations may have the power to exert positive physical and psychological health benefits, of a similar nature to those reported in studies using pre and probiotics. The small sample size and lack of control over confounding variables means that it will be important to replicate these findings in larger-scale controlled, prospective, clinical trials. This dietary microbiome intervention has the potential to improve physical and emotional wellbeing in the general population but also to be investigated as a treatment option for individuals with conditions as diverse as IBS, anxiety, depression and Alzheimer's disease.

Feed additives shift gut microbiota and enrich antibiotic resistance in swine gut.

PubMed

Zhao, Yi; Su, Jian-Qiang; An, Xin-Li; Huang, Fu-Yi; Rensing, Christopher; Brandt, Kristian Koefoed; Zhu, Yong-Guan

2018-04-15

Antibiotic resistance genes (ARGs) are emerging environmental contaminants posing a threat to public health. Antibiotics and metals are widely used as feed additives and could consequently affect ARGs in swine gut. In this study, high-throughput quantitative polymerase chain reaction (HT-qPCR) based ARG chip and next-generation 16S rRNA gene amplicon sequencing data were analyzed using multiple statistical approaches to profile the antibiotic resistome and investigate its linkages to antibiotics and metals used as feed additives and to the microbial community composition in freshly collected swine manure samples from three large-scale Chinese pig farms. A total of 146 ARGs and up to 1.3×10 10 total ARG copies per gram of swine feces were detected. ARGs conferring resistance to aminoglycoside, macrolide-lincosamide-streptogramin B (MLSB) and tetracycline were dominant in pig gut. Total abundance of ARGs was positively correlated with in-feed antibiotics, microbial biomass and abundance of mobile genetic elements (MGEs) (P<0.05). A significant correlation between microbial communities and ARG profiles was observed by Procrustes analysis. Network analysis revealed that Bacteroidetes and Firmicutes were the most dominant phyla co-occurring with specific ARGs. Partial redundancy analysis indicated that the variance in ARG profiles could be primarily attributed to antibiotics and metals in feed (31.8%), gut microbial community composition (23.3%) and interaction between feed additives and community composition (16.5%). These results suggest that increased levels of in-feed additives could aggravate the enrichment of ARGs and MGEs in swine gut. Copyright © 2017 Elsevier B.V. All rights reserved.

Unraveling the processes shaping mammalian gut microbiomes over evolutionary time

PubMed Central

Groussin, Mathieu; Mazel, Florent; Sanders, Jon G.; Smillie, Chris S.; Lavergne, Sébastien; Thuiller, Wilfried; Alm, Eric J.

2017-01-01

Whether mammal–microbiome interactions are persistent and specific over evolutionary time is controversial. Here we show that host phylogeny and major dietary shifts have affected the distribution of different gut bacterial lineages and did so on vastly different bacterial phylogenetic resolutions. Diet mostly influences the acquisition of ancient and large microbial lineages. Conversely, correlation with host phylogeny is mostly seen among more recently diverged bacterial lineages, consistent with processes operating at similar timescales to host evolution. Considering microbiomes at appropriate phylogenetic scales allows us to model their evolution along the mammalian tree and to infer ancient diets from the predicted microbiomes of mammalian ancestors. Phylogenetic analyses support co-speciation as having a significant role in the evolution of mammalian gut microbiome compositions. Highly co-speciating bacterial genera are also associated with immune diseases in humans, laying a path for future studies that probe these co-speciating bacteria for signs of co-evolution. PMID:28230052

Grand unified theories, topological defects, and ultrahigh-energy cosmic rays

NASA Technical Reports Server (NTRS)

Bhattacharjee, Pijushpani; Hill, Christopher T.; Schramm, David N.

1992-01-01

The ultrahigh-energy (UHE) proton and neutrino spectra resulting from collapse or annihilations of topological defects surviving from the GUT era are calculated. Irrespective of the specific process under consideration (which determines the overall normalization of the spectrum), the UHE proton spectrum always 'recovers' at approximately 1.8 x 10 exp 11 GeV after a partial Greisen-Zatsepin-Kuz'min 'cutoff' at approximately 5 x 10 exp 10 GeV and continues to a GUT-scale energy with a universal shape determined by the physics of hadronic jet fragmentation. Implications of the results are discussed.

Grand unified theories, topological defects and ultrahigh-energy cosmic rays

NASA Technical Reports Server (NTRS)

Bhattacharjee, Pijushpani; Hill, Christopher T.; Schramm, David N.

1991-01-01

The ultrahigh-energy (UHE) proton and neutrino spectra resulting from collapse or annihilations of topological defects surviving from the GUT era are calculated. Irrespective of the specific process under consideration (which determines the overall normalization of the spectrum), the UHE proton spectrum always 'recovers' at approximately 1.8 x 10 exp 11 GeV after a partial Greisen-Zatsepin-Kuz'min 'cutoff' at approximately 5 x 10 exp 10 GeV and continues to a GUT-scale energy with a universal shape determined by the physics of hadronic jet fragmentation. Implications of our results are discussed.

Phylogenetic and ecological factors impact the gut microbiota of two Neotropical primate species.

PubMed

Amato, Katherine R; Martinez-Mota, Rodolfo; Righini, Nicoletta; Raguet-Schofield, Melissa; Corcione, Fabiana Paola; Marini, Elisabetta; Humphrey, Greg; Gogul, Grant; Gaffney, James; Lovelace, Elijah; Williams, LaShanda; Luong, Albert; Dominguez-Bello, Maria Gloria; Stumpf, Rebecca M; White, Bryan; Nelson, Karen E; Knight, Rob; Leigh, Steven R

2016-03-01

Recent studies suggest that variation in diet across time and space results in changes in the mammalian gut microbiota. This variation may ultimately impact host ecology by altering nutritional status and health. Wild animal populations provide an excellent opportunity for understanding these interactions. However, compared to clinical studies, microbial research targeting wild animals is currently limited, and many published studies focus only on a single population of a single host species. In this study we utilize fecal samples from two species of howler monkey (Alouatta pigra and A. palliata) collected at four sites to investigate factors influencing the gut microbiota at three scales: taxonomic (host species), ecosystemic (forest type), and local (habitat disturbance/season). The results demonstrate that the effect of host species on the gut microbiota is stronger than the effect of host forest type, which is stronger than the effect of habitat disturbance or seasonality. Nevertheless, within host species, gut microbiota composition differs in response to forest type, habitat disturbance, and season. Variations in the effect size of these factors are associated both with host species and environment. This information may be beneficial for understanding ecological and evolutionary questions associated with Mesoamerican howler monkeys, as well as determining conservation challenges facing each species. These mechanisms may also provide insight into the ecology of other species of howler monkeys, non-human primates, and mammals.

Multiwavelength Study of Active Galaxies

NASA Astrophysics Data System (ADS)

Singh, Veeresh

2010-08-01

Seyfert galaxies are a subclass of active galaxies and are categorized as nearby, low luminosity, radio-quiet Active Galactic Nuclei (AGN) hosted in spiral or lenticular galaxies. Demographically, Seyfert galaxies may account for ~ 10% of the entire population of active galaxies in the nearby universe. Seyfert galaxies are classified mainly into two subclasses named as `type 1' and `type 2' Seyferts, based on the presence and absence of broad permitted emission lines in their optical spectra, respectively. Detection of broad permitted emission lines in some Seyfert type 2s observed in the polarized light laid the foundation of the Seyfert unification scheme, which hypothesizes that Seyfert type 1s and type 2s belong to the same parent population and appear different solely due to the differing orientations of the obscuring material having a torus-like geometry around the AGN (Antonucci and Miller 1985; Antonucci 1993). The primary objective of this thesis work is to examine the validity and limitations of the orientation and obscuration based Seyfert unification scheme using multiwavelength (mainly X-ray and radio) observations. The key issue in testing the Seyfert unification scheme has been acquiring a well defined rigorously selected Seyfert sample. I have argued that the Seyfert samples based on flux limited surveys at optical, IR, UV and X-ray are likely to be biased against obscured and faint sources. In order to test the predictions of Seyfert unification scheme I use a sample based on properties (i.e., cosmological redshift, [OIII] emission line luminosity, absolute bulge magnitude, absolute stellar magnitude of the host galaxy and the Hubble stage of the host galaxy) that are independent to the orientation of the obscuring torus, host galaxy and the AGN axis. Furthermore, two Seyfert subtypes of our sample have matched distributions in the orientation-independent properties and this ensures the intrinsic similarity between two Seyfert subtypes within the framework of the unification scheme. In other words, it is ensured that the two subtypes being compared are not selected from entirely different parts of the evolution function (redshift, luminosity, bulge magnitude, stellar luminosity of the host galaxy and Hubble type of the host galaxy). To study the X-ray spectral properties of two Seyfert subtypes I use the XMM-Newton pn data. The 0.5 - 10 keV X-ray spectra of Seyfert galaxies are generally best fitted with a model consists of: an absorbed power law with exponential cut-off which contains cold absorption from the Galactic hydrogen column density together with absorption from neutral gas at the redshift of the source; a narrow Gaussian line fitted to the Fe K_alpha line at 6.4 keV; a soft excess component characterized by either a steep power law and/or a thermal plasma model with temperature kT and in some cases, reflection component characterized by the reflection from an isotropically illuminated cold slab, (model `pexrav' in XSPEC) is required. Partial covering of the primary AGN power law component is also required for the best fit in some sources. There are several type 2 sources in our sample in which the hard (2.0 - 10.0 keV) part of the X-ray spectrum is best fitted with a reflection component alone (`pexrav' model). The statistical comparisons of the X-ray spectral properties show that in compared to Seyfert type 1s, the type 2s exhibit lower X-ray luminosities in soft (0.5 - 2.0 keV) and hard (2.0 - 10.0) X-ray bands, higher X-ray absorbing column densities, higher equivalent widths of Fe K line, and lower flux ratios of hard X-ray (2.0 - 10.0 keV) to [OIII]. In both the Seyfert subtypes, the X-ray luminosity is moderately correlated with the pc-scale, kpc-scale radio luminosities and [OIII] line luminosity, in a similar fashion. A large fraction ~ 60 - 70% of type 2 Seyferts of our sample are likely to be Compton-thick and as a case study of a Compton-thick AGN, we studied the broad-band 0.5 - 50 keV X-ray spectral properties of NGC 5135 using Suzaku (XIS and HID) data to unveil the nature and geometry of obscuring torus. To test the predictions of the Seyfert unification scheme in the radio regime, I studied the radio properties of Seyfert galaxies using Giant Meterwave Radio Telescope (GMRT) observations carried out at 240 MHz/610 MHz, and NRAO VLA Sky Survey observations at 1.4 GHz and VLA 5 GHz observations from the literature. The four point (240 MHz, 610 MHz, 1.4 GHz, 5.0 GHz) integrated radio spectra of the two Seyfert subtypes are similar and fairly steep (i.e., spectral index ~ -0.7). Radio luminosity distributions at 240 MHz, 610 MHz, 1.4 GHz and 5.0 GHz are also similar for the Seyfert type 1s and type 2s. The study on radio - IR luminosity correlations shows that for both the Seyfert subtypes, the total 610 MHz and 240 MHz radio luminosities are moderately correlated with near-IR, mid-IR luminosities while the correlation becomes poorer with far-IR luminosities. Furthermore, the 12 micron, 25 micron, 60 micron and 100 micron IR luminosity distributions are also statistically simil! ar for the Seyfert type 1s and type 2s. I conclude that the statistical comparisons of the X-ray, radio and IR properties of the two Seyfert subtypes of our sample are consistent with the obscuration and orientation based unification scheme.

The Impact of International and Domestic Factors on the Military Outcomes of National Unification: A Study of Four Historical Cases with Lessons for Korean Unification

DTIC Science & Technology

2014-06-01

between projecting an image of strength and convincing the world that it valued the city-state’s economic success and the laissez - faire sociopolitical...immediately. Poland had not existed as a country when World War I was fought, but its native leadership had a window of opportunity afterward to...reforms in the late 1980s removed from East Germany’s Communist leadership the support that they had long depended on, and the East German people took

The need for an intermediate mass scale in GUTs

NASA Technical Reports Server (NTRS)

Shafi, Q.

1983-01-01

The minimal SU(5) grand unified field theory (GUT) model fails to resolve the strong charge parity (CP) problem, suffers from the cosmological monopole problem, sheds no light on the nature of the 'dark' mass in the universe, and predicts an unacceptably low value for the baryon asymmetry. All these problems can be overcome in suitable grand unified axion models with an intermediate mass scale of about 10 to the 11th power to 10 to the 12th power GeV. An example based on the gauge group SO(10) is presented. Among other things, it predicts that the axions comprise the 'dark' mass in the universe, and that there exists a galactic monopole flux of 10 to the -8th power to 10 to the -7th power/sq cm/yr. Other topics that are briefly discussed include proton decay, family symmetry, neutrino masses and the gauge hierarchy problem.

Effective sextic superpotential and B-L violation in NMSGUT

NASA Astrophysics Data System (ADS)

Aulakh, C. S.; Awasthi, R. L.; Krishna, Shri

2017-10-01

We list operators of the superpotential of the effective MSSM that emerge from the NMSGUT up to sextic degree. We give illustrative expressions for the coefficients in terms of NMSGUT parameters. We also estimate the impact of GUT scale threshold corrections on these effective operators in view of the demonstration that B violation via quartic superpotential terms can be suppressed to acceptable levels after including such corrections in the NMSGUT. We find a novel B, B-L violating quintic operator that leads to the decay mode n→ e^- K^+. We also remark that the threshold corrections to the Type-I seesaw mechanism make the deviation of right-handed neutrino masses from the GUT scale more natural while Type-II seesaw neutrino masses, which earlier tended to utterly negligible receive threshold enhancement. Our results are of relevance for analysing B-L violating operator-based, sphaleron-safe, baryogenesis.

The gut microbiota and host health: a new clinical frontier.

PubMed

Marchesi, Julian R; Adams, David H; Fava, Francesca; Hermes, Gerben D A; Hirschfield, Gideon M; Hold, Georgina; Quraishi, Mohammed Nabil; Kinross, James; Smidt, Hauke; Tuohy, Kieran M; Thomas, Linda V; Zoetendal, Erwin G; Hart, Ailsa

2016-02-01

Over the last 10-15 years, our understanding of the composition and functions of the human gut microbiota has increased exponentially. To a large extent, this has been due to new 'omic' technologies that have facilitated large-scale analysis of the genetic and metabolic profile of this microbial community, revealing it to be comparable in influence to a new organ in the body and offering the possibility of a new route for therapeutic intervention. Moreover, it might be more accurate to think of it like an immune system: a collection of cells that work in unison with the host and that can promote health but sometimes initiate disease. This review gives an update on the current knowledge in the area of gut disorders, in particular metabolic syndrome and obesity-related disease, liver disease, IBD and colorectal cancer. The potential of manipulating the gut microbiota in these disorders is assessed, with an examination of the latest and most relevant evidence relating to antibiotics, probiotics, prebiotics, polyphenols and faecal microbiota transplantation. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/

Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates.

PubMed

Vandeputte, Doris; Falony, Gwen; Vieira-Silva, Sara; Tito, Raul Y; Joossens, Marie; Raes, Jeroen

2016-01-01

The assessment of potentially confounding factors affecting colon microbiota composition is essential to the identification of robust microbiome based disease markers. Here, we investigate the link between gut microbiota variation and stool consistency using Bristol Stool Scale classification, which reflects faecal water content and activity, and is considered a proxy for intestinal colon transit time. Through 16S rDNA Illumina profiling of faecal samples of 53 healthy women, we evaluated associations between microbiome richness, Bacteroidetes:Firmicutes ratio, enterotypes, and genus abundance with self-reported, Bristol Stool Scale-based stool consistency. Each sample's microbiota growth potential was calculated to test whether transit time acts as a selective force on gut bacterial growth rates. Stool consistency strongly correlates with all known major microbiome markers. It is negatively correlated with species richness, positively associated to the Bacteroidetes:Firmicutes ratio, and linked to Akkermansia and Methanobrevibacter abundance. Enterotypes are distinctly distributed over the BSS-scores. Based on the correlations between microbiota growth potential and stool consistency scores within both enterotypes, we hypothesise that accelerated transit contributes to colon ecosystem differentiation. While shorter transit times can be linked to increased abundance of fast growing species in Ruminococcaceae-Bacteroides samples, hinting to a washout avoidance strategy of faster replication, this trend is absent in Prevotella-enterotyped individuals. Within this enterotype adherence to host tissue therefore appears to be a more likely bacterial strategy to cope with washout. The strength of the associations between stool consistency and species richness, enterotypes and community composition emphasises the crucial importance of stool consistency assessment in gut metagenome-wide association studies. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/

Phylogenetic ecology at world scale, a new fusion between ecology and evolution.

PubMed

Westoby, Mark

2006-07-01

One fusion between ecology and evolution is well established, under the title of population biology. The years 2006-2020 will see a new fusion, likely to prove equally creative. Inputs from ecology to this second fusion will be worldwide data sets for ecological traits across many species. Inputs from evolution will be phylogenetic trees with well-resolved topology and with increasingly tight geological dates for each branch point. There will be unification of two aims: first to explain the spread of different ways of making a living, across the range of present-day species; and second, to narrate the evolutionary history that has led up to present-day ecology.

Viscous Flow

NASA Astrophysics Data System (ADS)

Ockendon, Hilary; Ockendon, John

1995-01-01

Viscous flow crops up in many real-life situations such as aerodynamics and lubrication, and because of its universality it is a paradigm for the application of mathematics to the real world. This book is a coherent account of the ways in which mathematics can both give insight into viscous flow and suggest analogies and implications for other branches of applied mathematics. The authors place particular emphasis on the unification brought about by the use of asymptotic analysis and scaling properties and the use of everyday observations from the real world (especially industry) to illustrate the theory. The book is aimed at final-year undergraduate and beginning graduate students in applied mathematics, physics, and engineering courses on fluid flow.

Discovery of proton decay: A must for theory, a challenge for experiment

NASA Astrophysics Data System (ADS)

Pati, Jogesh C.

2000-08-01

It is noted that, but for one missing piece—proton decay—the evidence in support of grand unification is now strong. It includes: (i) the observed family-structure, (ii) the meeting of the gauge couplings, (iii) neutrino-oscillations, (iv) the intricate pattern of the masses and mixings of all fermions, including the neutrinos, and (v) the need for B-L as a generator, to implement baryogenesis. Taken together, these not only favor grand unification but in fact select out a particular route to such unification, based on the ideas of supersymmetry, SU(4)-color and left-right symmetry. Thus they point to the relevance of an effective string-unified G(224) or SO(10)-symmetry. A concrete proposal is presented, within a predictive SO(10)/G(224)-framework, that successfully describes the masses and mixings of all fermions, including the neutrinos—with eight predictions, all in agreement with observation. Within this framework, a systematic study of proton decay is carried out, which pays special attention to its dependence on the fermion masses, including the superheavy Majorana masses of the right-handed neutrinos. The study shows that a conservative upper limit on the proton lifetime is about (1/2-1)×1034yrs, with ν¯K+ being the dominant decay mode, and as a distinctive feature, μ+K0 being prominent. This in turn strongly suggests that an improvement in the current sensitivity by a factor of five to ten (compared to SuperK) ought to reveal proton decay. Otherwise some promising and remarkably successful ideas on unification would suffer a major setback.

MODEL TESTS AND 3D ELASTIC FINITE ELEMENT ANALYSIS FOR STEEL PIPE PILES WITH WINGS IN STALLED IN SOIL CEMENT COLUMN

NASA Astrophysics Data System (ADS)

Tamai, Toshiyuki; Teramoto, Shuntarou; Kimura, Makoto

Steel pipe piles with wings installed in soil cement column is a composite foundation of pile consisting of soil improvement with cement and steel pipe with wings. This type of pile shows higher vertical bearing capacity when compared to steel pipe piles that are installed without soil cement. It is thought the wings contribute to higher bearing capacity of this type of piles. The wings are also thought to play the role of structural unification of pile foundations and load transfer. In this study, model test and 3D elastic finite element analysis was carried out in order to elucidate the effect of wings on the structural unification of pile foundation and the load transfer mechanism. Firstly, the model test was carried out in order to grasp the influence of pile with and without wings, the shape of wings of the pile and the unconfined compression strength of the soil cement on the structural unification of the pile foundation. The numerical analysis of the model test was then carried out on the intermediate part of the pile foundation with wings and mathematical model developed. Finally load tran sfer mechanism was checked for the entire length of the pile through this mathematical model and the load sharing ratio of the wings and stress distribution occurring in the soil cement clarified. In addition, the effect of the wing interval on the structural unification of the pile foundation and load transfer was also checked and clarified.

Assessment of the suitability of GOCE-based geoid models for the unification of the North American vertical datums

NASA Astrophysics Data System (ADS)

Amjadiparvar, Babak; Sideris, Michael

2015-04-01

Precise gravimetric geoid heights are required when the unification of vertical datums is performed using the Geodetic Boundary Value Problem (GBVP) approach. Five generations of Global Geopotential Models (GGMs) derived from Gravity field and steady-state Ocean Circulation Explorer (GOCE) observations have been computed and released so far (available via IAG's International Centre for Global Earth Models, ICGEM, http://icgem.gfz-potsdam.de/ICGEM/). The performance of many of these models with respect to geoid determination has been studied in order to select the best performing model to be used in height datum unification in North America. More specifically, Release-3, 4 and 5 of the GOCE-based global geopotential models have been evaluated using GNSS-levelling data as independent control values. Comparisons against EGM2008 show that each successive release improves upon the previous one, with Release-5 models showing an improvement over EGM2008 in Canada and CONUS between spherical harmonic degrees 100 and 210. In Alaska and Mexico, a considerable improvement over EGM2008 was brought by the Release-5 models when used up to spherical harmonic degrees of 250 and 280, respectively. The positive impact of the Release-5 models was also felt when a gravimetric geoid was computed using the GOCE-based GGMs together with gravity and topography data in Canada. This geoid model, with appropriately modified Stokes kernel between spherical harmonic degrees 190 and 260, performed better than the official Canadian gravimetric geoid model CGG2013, thus illustrating the advantages of using the latest release GOCE-based models for vertical datum unification in North America.

Towards anatomic scale agent-based modeling with a massively parallel spatially explicit general-purpose model of enteric tissue (SEGMEnT_HPC).

PubMed

Cockrell, Robert Chase; Christley, Scott; Chang, Eugene; An, Gary

2015-01-01

Perhaps the greatest challenge currently facing the biomedical research community is the ability to integrate highly detailed cellular and molecular mechanisms to represent clinical disease states as a pathway to engineer effective therapeutics. This is particularly evident in the representation of organ-level pathophysiology in terms of abnormal tissue structure, which, through histology, remains a mainstay in disease diagnosis and staging. As such, being able to generate anatomic scale simulations is a highly desirable goal. While computational limitations have previously constrained the size and scope of multi-scale computational models, advances in the capacity and availability of high-performance computing (HPC) resources have greatly expanded the ability of computational models of biological systems to achieve anatomic, clinically relevant scale. Diseases of the intestinal tract are exemplary examples of pathophysiological processes that manifest at multiple scales of spatial resolution, with structural abnormalities present at the microscopic, macroscopic and organ-levels. In this paper, we describe a novel, massively parallel computational model of the gut, the Spatially Explicitly General-purpose Model of Enteric Tissue_HPC (SEGMEnT_HPC), which extends an existing model of the gut epithelium, SEGMEnT, in order to create cell-for-cell anatomic scale simulations. We present an example implementation of SEGMEnT_HPC that simulates the pathogenesis of ileal pouchitis, and important clinical entity that affects patients following remedial surgery for ulcerative colitis.

ESA BRAT (Broadview Radar Altimetry Toolbox) and GUT (GOCE User Toolbox) toolboxes

NASA Astrophysics Data System (ADS)

Benveniste, J.; Ambrozio, A.; Restano, M.

2016-12-01

The Broadview Radar Altimetry Toolbox (BRAT) is a collection of tools designed to facilitate the processing of radar altimetry data from previous and current altimetry missions, including the upcoming Sentinel-3A L1 and L2 products. A tutorial is included providing plenty of use cases. BRAT's future release (4.0.0) is planned for September 2016. Based on the community feedback, the frontend has been further improved and simplified whereas the capability to use BRAT in conjunction with MATLAB/IDL or C/C++/Python/Fortran, allowing users to obtain desired data bypassing the data-formatting hassle, remains unchanged. Several kinds of computations can be done within BRAT involving the combination of data fields, that can be saved for future uses, either by using embedded formulas including those from oceanographic altimetry, or by implementing ad-hoc Python modules created by users to meet their needs. BRAT can also be used to quickly visualise data, or to translate data into other formats, e.g. from NetCDF to raster images. The GOCE User Toolbox (GUT) is a compilation of tools for the use and the analysis of GOCE gravity field models. It facilitates using, viewing and post-processing GOCE L2 data and allows gravity field data, in conjunction and consistently with any other auxiliary data set, to be pre-processed by beginners in gravity field processing, for oceanographic and hydrologic as well as for solid earth applications at both regional and global scales. Hence, GUT facilitates the extensive use of data acquired during GRACE and GOCE missions. In the current 3.0 version, GUT has been outfitted with a graphical user interface allowing users to visually program data processing workflows. Further enhancements aiming at facilitating the use of gradients, the anisotropic diffusive filtering, and the computation of Bouguer and isostatic gravity anomalies have been introduced. Packaged with GUT is also GUT's VCM (Variance-Covariance Matrix) tool for analysing GOCE's variance-covariance matrices. BRAT and GUT toolboxes can be freely downloaded, along with ancillary material, at https://earth.esa.int/brat and https://earth.esa.int/gut.

The BRAT and GUT Couple: Broadview Radar Altimetry and GOCE User Toolboxes

NASA Astrophysics Data System (ADS)

Benveniste, J.; Restano, M.; Ambrózio, A.

2017-12-01

The Broadview Radar Altimetry Toolbox (BRAT) is a collection of tools designed to facilitate the processing of radar altimetry data from previous and current altimetry missions, including Sentinel-3A L1 and L2 products. A tutorial is included providing plenty of use cases. BRAT's next release (4.2.0) is planned for October 2017. Based on the community feedback, the front-end has been further improved and simplified whereas the capability to use BRAT in conjunction with MATLAB/IDL or C/C++/Python/Fortran, allowing users to obtain desired data bypassing the data-formatting hassle, remains unchanged. Several kinds of computations can be done within BRAT involving the combination of data fields, that can be saved for future uses, either by using embedded formulas including those from oceanographic altimetry, or by implementing ad-hoc Python modules created by users to meet their needs. BRAT can also be used to quickly visualise data, or to translate data into other formats, e.g. from NetCDF to raster images. The GOCE User Toolbox (GUT) is a compilation of tools for the use and the analysis of GOCE gravity field models. It facilitates using, viewing and post-processing GOCE L2 data and allows gravity field data, in conjunction and consistently with any other auxiliary data set, to be pre-processed by beginners in gravity field processing, for oceanographic and hydrologic as well as for solid earth applications at both regional and global scales. Hence, GUT facilitates the extensive use of data acquired during GRACE and GOCE missions. In the current 3.1 version, GUT has been outfitted with a graphical user interface allowing users to visually program data processing workflows. Further enhancements aiming at facilitating the use of gradients, the anisotropic diffusive filtering, and the computation of Bouguer and isostatic gravity anomalies have been introduced. Packaged with GUT is also GUT's Variance-Covariance Matrix tool (VCM). BRAT and GUT toolboxes can be freely downloaded, along with ancillary material, at https://earth.esa.int/brat and https://earth.esa.int/gut.

Development of the honey bee gut microbiome throughout the queen-rearing process.

PubMed

Tarpy, David R; Mattila, Heather R; Newton, Irene L G

2015-05-01

The European honey bee (Apis mellifera) is used extensively to produce hive products and for crop pollination, but pervasive concerns about colony health and population decline have sparked an interest in the microbial communities that are associated with these important insects. Currently, only the microbiome of workers has been characterized, while little to nothing is known about the bacterial communities that are associated with queens, even though their health and proper function are central to colony productivity. Here, we provide a large-scale analysis of the gut microbiome of honey bee queens during their developmental trajectory and through the multiple colonies that host them as part of modern queen-rearing practices. We found that queen microbiomes underwent a dramatic shift in size and composition as they aged and encountered different worker populations and colony environments. Queen microbiomes were dominated by enteric bacteria in early life but were comprised primarily of alphaproteobacteria at maturity. Furthermore, queen gut microbiomes did not reflect those of the workers who tended them and, indeed, they lacked many of the bacteria that are considered vital to workers. While worker gut microbiotas were consistent across the unrelated colony populations sampled, the microbiotas of the related queens were highly variable. Bacterial communities in mature queen guts were similar in size to those of mature workers and were characterized by dominant and specific alphaproteobacterial strains known to be associated with worker hypopharyngeal glands. Our results suggest a model in which queen guts are colonized by bacteria from workers' glands, in contrast to routes of maternal inoculation for other animal microbiomes. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Human gut bacterial communities are altered by addition of cruciferous vegetables to a controlled fruit- and vegetable-free diet.

PubMed

Li, Fei; Hullar, Meredith A J; Schwarz, Yvonne; Lampe, Johanna W

2009-09-01

In the human gut, commensal bacteria metabolize food components that typically serve as energy sources. These components have the potential to influence gut bacterial community composition. Cruciferous vegetables, such as broccoli and cabbage, contain distinctive compounds that can be utilized by gut bacteria. For example, glucosinolates can be hydrolyzed by certain bacteria, and dietary fibers can be fermented by a range of species. We hypothesized that cruciferous vegetable consumption would alter growth of certain bacteria, thereby altering bacterial community composition. We tested this hypothesis in a randomized, crossover, controlled feeding study. Fecal samples were collected from 17 participants at the end of 2 14-d intake periods: a low-phytochemical, low-fiber basal diet (i.e. refined grains without fruits or vegetables) and a high ("double") cruciferous vegetable diet [basal diet + 14 g cruciferous vegetables/(kg body weightd)]. Fecal bacterial composition was analyzed by the terminal restriction fragment length polymorphism (tRFLP) method using the bacterial 16S ribosomal RNA gene and nucleotide sequencing. Using blocked multi-response permutation procedures analysis, we found that overall bacterial community composition differed between the 2 consumption periods (delta = 0.603; P = 0.011). The bacterial community response to cruciferous vegetables was individual-specific, as revealed by nonmetric multidimensional scaling ordination analysis. Specific tRFLP fragments that characterized each of the diets were identified using indicator species analysis. Putative species corresponding to these fragments were identified through gene sequencing as Eubacterium hallii, Phascolarctobacterium faecium, Burkholderiales spp., Alistipes putredinis, and Eggerthella spp. In conclusion, human gut bacterial community composition was altered by cruciferous vegetable consumption, which could ultimately influence gut metabolism of bioactive food components and host exposure to these compounds.

Steering Endogenous Butyrate Production in the Intestinal Tract of Broilers as a Tool to Improve Gut Health

PubMed Central

Onrust, Lonneke; Ducatelle, Richard; Van Driessche, Karolien; De Maesschalck, Celine; Vermeulen, Karen; Haesebrouck, Freddy; Eeckhaut, Venessa; Van Immerseel, Filip

2015-01-01

The ban on antimicrobial growth promoters and efforts to reduce therapeutic antibiotic usage has led to major problems of gastrointestinal dysbiosis in livestock production in Europe. Control of dysbiosis without the use of antibiotics requires a thorough understanding of the interaction between the microbiota and the host mucosa. The gut microbiota of the healthy chicken is highly diverse, producing various metabolic end products, including gases and fermentation acids. The distal gut knows an abundance of bacteria from within the Firmicutes Clostridium clusters IV and XIVa that produce butyric acid, which is one of the metabolites that are sensed by the host as a signal. The host responds by strengthening the epithelial barrier, reducing inflammation, and increasing the production of mucins and antimicrobial peptides. Stimulating the colonization and growth of butyrate-producing bacteria thus may help optimizing gut health. Various strategies are available to stimulate butyrate production in the distal gut. These include delivery of prebiotic substrates that are broken down by bacteria into smaller molecules which are then used by butyrate producers, a concept called cross-feeding. Xylo-oligosaccharides (XOS) are such compounds as they can be converted to lactate, which is further metabolized to butyrate. Probiotic lactic acid producers can be supplied to support the cross-feeding reactions. Direct feeding of butyrate-producing Clostridium cluster IV and XIVa strains are a future tool provided that large scale production of strictly anaerobic bacteria can be optimized. Current results of strategies that promote butyrate production in the gut are promising. Nevertheless, our current understanding of the intestinal ecosystem is still insufficient, and further research efforts are needed to fully exploit the capacity of these strategies. PMID:26734618

Reflections on the nature of the concepts of field in physics

NASA Astrophysics Data System (ADS)

Pombo, C.

2012-12-01

This paper is a short introduction on the analysis of the concepts of field in physics, showing their different natures. It comprises a study on the development of observers based on observational realism, a physical epistemology in development, on the basis of analytical psychology. This epistemology incorporates and justify the proposition of R. Carnap, of separating observational and theoretical domains of a theory, and gives a criterion for this separation. The basis of three theories are discussed, where concepts of field emerge. We discuss the different origins and meanings of these fields, from an epistemological point of view, in their respective theories. The aim of this paper is to form a basis of discussion to be applied in the analysis of other theories where concepts of field are present, to reach a better understanding of the contemporary programs of unification. We would like to clarify if these programs are intended for unification of fields as elements of the physical reality, fields as explanations for the observations, unification of their theories, or other possible cases.

Low-luminosity Blazars in Wise: A Mid-infrared View of Unification

NASA Astrophysics Data System (ADS)

Plotkin, Richard M.; Anderson, S. F.; Brandt, W. N.; Markoff, S.; Shemmer, O.; Wu, J.

2012-01-01

We use the preliminary data release from the Wide-Field Infrared Survey Explorer (WISE) to perform the first statistical study on the mid-infrared (IR) properties of a large number ( 102) of BL Lac objects -- low-luminosity Active Galactic Nuclei (AGN) with a jet beamed toward the Earth. As expected, many BL Lac objects are so highly beamed that their jet synchrotron emission dominates their IR spectral energy distributions (SEDs), and the shape of their SEDs in the IR correlates well with SED peak frequency. In other BL Lac objects, the jet is not strong enough to completely dilute the rest of the AGN, and we do not see observational signatures of the dusty torus from these weakly beamed BL Lac objects. While at odds with simple unification, the missing torus is consistent with recent suggestions that BL Lac objects are fed by radiatively inefficient accretion flows. We discuss implications on the ``nature vs. nurture" debate for FR I and FR II galaxies, and also on the standard orientation-based AGN unification model.

Comparative gut microbiota and resistome profiling of intensive care patients receiving selective digestive tract decontamination and healthy subjects.

PubMed

Buelow, Elena; Bello González, Teresita D J; Fuentes, Susana; de Steenhuijsen Piters, Wouter A A; Lahti, Leo; Bayjanov, Jumamurat R; Majoor, Eline A M; Braat, Johanna C; van Mourik, Maaike S M; Oostdijk, Evelien A N; Willems, Rob J L; Bonten, Marc J M; van Passel, Mark W J; Smidt, Hauke; van Schaik, Willem

2017-08-14

The gut microbiota is a reservoir of opportunistic pathogens that can cause life-threatening infections in critically ill patients during their stay in an intensive care unit (ICU). To suppress gut colonization with opportunistic pathogens, a prophylactic antibiotic regimen, termed "selective decontamination of the digestive tract" (SDD), is used in some countries where it improves clinical outcome in ICU patients. Yet, the impact of ICU hospitalization and SDD on the gut microbiota remains largely unknown. Here, we characterize the composition of the gut microbiota and its antimicrobial resistance genes ("the resistome") of ICU patients during SDD and of healthy subjects. From ten patients that were acutely admitted to the ICU, 30 fecal samples were collected during ICU stay. Additionally, feces were collected from five of these patients after transfer to a medium-care ward and cessation of SDD. Feces from ten healthy subjects were collected twice, with a 1-year interval. Gut microbiota and resistome composition were determined using 16S rRNA gene phylogenetic profiling and nanolitre-scale quantitative PCRs. The microbiota of the ICU patients differed from the microbiota of healthy subjects and was characterized by lower microbial diversity, decreased levels of Escherichia coli and of anaerobic Gram-positive, butyrate-producing bacteria of the Clostridium clusters IV and XIVa, and an increased abundance of Bacteroidetes and enterococci. Four resistance genes (aac(6')-Ii, ermC, qacA, tetQ), providing resistance to aminoglycosides, macrolides, disinfectants, and tetracyclines, respectively, were significantly more abundant among ICU patients than in healthy subjects, while a chloramphenicol resistance gene (catA) and a tetracycline resistance gene (tetW) were more abundant in healthy subjects. The gut microbiota of SDD-treated ICU patients deviated strongly from the gut microbiota of healthy subjects. The negative effects on the resistome were limited to selection for four resistance genes. While it was not possible to disentangle the effects of SDD from confounding variables in the patient cohort, our data suggest that the risks associated with ICU hospitalization and SDD on selection for antibiotic resistance are limited. However, we found evidence indicating that recolonization of the gut by antibiotic-resistant bacteria may occur upon ICU discharge and cessation of SDD.

Hilltop supernatural inflation and SUSY unified models

NASA Astrophysics Data System (ADS)

Kohri, Kazunori; Lim, C. S.; Lin, Chia-Min; Mimura, Yukihiro

2014-01-01

In this paper, we consider high scale (100TeV) supersymmetry (SUSY) breaking and realize the idea of hilltop supernatural inflation in concrete particle physics models based on flipped-SU(5)and Pati-Salam models in the framework of supersymmetric grand unified theories (SUSY GUTs). The inflaton can be a flat direction including right-handed sneutrino and the waterfall field is a GUT Higgs. The spectral index is ns = 0.96 which fits very well with recent data by PLANCK satellite. There is no both thermal and non-thermal gravitino problems. Non-thermal leptogenesis can be resulted from the decay of right-handed sneutrino which plays (part of) the role of inflaton.

Accretion Rate: An Axis Of Agn Unification

NASA Astrophysics Data System (ADS)

Trump, Jonathan R.; Impey, C. D.; Kelly, B. C.

2011-01-01

We show how accretion rate governs the physical properties of broad-line, narrow-line, and lineless active galactic nuclei (AGNs). We avoid the systematic errors plaguing previous studies of AGN accretion rate by using accurate accretion luminosities from well-sampled multiwavelength SEDs from the Cosmic Evolution Survey (COSMOS), and accurate black hole masses derived from virial scaling relations (for broad-line AGNs) or host-AGN relations (for narrow-line and lineless AGNs). In general, broad emission lines are present only at the highest accretion rates (L/L_Edd>0.01), and these rapidly accreting AGNs are observed as broad-line AGNs or possibly as obscured narrow-line AGNs. Narrow-line and lineless AGNs at lower specific accretion rates (L/L_Edd<0.01) are unobscured and yet lack a broad line region. The disappearance of the broad emission lines is caused by an expanding radiatively inefficient accretion flow (RIAF) at the inner radius of the accretion disk. The presence of the RIAF also drives L/L_Edd<0.01 narrow-line and lineless AGNs to be 10-100 times more radio-luminous than broad-line AGNs, since the unbound nature of the RIAF means it is easier to form a radio outflow. The IR torus signature also tends to become weaker or disappear from L/L_Edd<0.01 AGNs, although there may be additional mid-IR synchrotron emission associated with the RIAF. Together these results suggest that specific accretion rate is an important physical "axis" of AGN unification, described by a simple model.

Implications of the CMS search for W R on grand unification

NASA Astrophysics Data System (ADS)

Bandyopadhyay, Triparno; Brahmachari, Biswajoy; Raychaudhuri, Amitava

2016-02-01

The CMS experiment at the Large Hadron Collider has reported a 2.8σ excess in the (2 e)(2 jets) channel around 2.1 TeV. Interpretation of this data is reconsidered in terms of the production of a right-handed weak gauge boson, W R , of the left-right symmetric model and in an SO(10) grand unified theory abiding by the Extended Survival Hypothesis. The left-right symmetric model can be consistent with this excess if (a) the heavy right-handed neutrino has a mass near W R , or (b) if g L ≠ g R , or (c) the right-handed CKM matrix is nontrivial. Combinations of the above possibilities are also viable. A W R with a mass in the TeV region if embedded in SO(10) is not compatible with g L = g R . Rather, it implies 0 .64 ≤ g R /g L ≤ 0 .78. Further, a unique symmetry-breaking route — the order being left-right discrete symmetry breaking first, followed by SU(4) C and finally SU(2) R — to the standard model is picked out. The L ↔ R discrete symmetry has to be broken at around 1016 GeV. The grand unification scale is pushed to 1018 GeV making the detection of proton decay in ongoing searches rather unlikely. The SU(4) C breaking scale can be at its allowed lower limit of 106 GeV so that n-overline{n} oscillation or flavour changing processes such as K L → μe and B d,s → μe may be detectable. The Higgs scalar multiplets responsible for SO(10) symmetry breaking at various stages are uniquely identified so long as one adheres to a minimalist principle. We also remark, en passant, about a partially unified Pati-Salam model.

Supersymmetric Model-Building in the Era of LHC Data: From Struggles with Naturalness to the Simple Delights of Fine-Tuning

NASA Astrophysics Data System (ADS)

Zorawski, Thomas

The Standard Model (SM) of particle physics has withstood decades of experimental tests, making it the crowning achievement of 20th century physics. However, it is not a complete description of nature. Observations have revealed that most of the matter in the universe is not of the baryonic form described in the SM but rather something else known as dark matter. The SM also has theoretical shortcomings: 1) No explanation for the widely-varying masses of different particles (flavor puzzle); 2) Failure of the couplings that characterize the strength of the three SM forces to unify at a high energy scale; 3) Instability of the Higgs mass (hierarchy problem). The simplest version of supersymmetry (SUSY) introduces a partner for each SM particle, resulting in the Minimal Supersymmetric Standard Model (MSSM). The lightest of these is stable and an appealing dark matter candidate, and the extra particle content yields good gauge coupling unification. Most model-building, however, has been inspired by the natural solution that the MSSM provides to the hierarchy problem when the superpartner masses are close to the weak scale, leading to the paradigm of the Natural (weak-scale) MSSM. Although the first run of the Large Hadron Collider (LHC) did not operate at the design energy, the data is already in tension with the idea of naturalness, as the bounds on some superpartner masses in vanilla models are significantly above the weak scale. We address this by constructing a hybrid of the two most appealing SUSY breaking mechanisms (gauge and anomaly mediation) that compresses part of the superpartner spectrum and reduces experimental sensitivity, thereby loosening the constraints. Nonetheless, the recent discovery of a Higgs-like particle at the LHC with a mass around 125 GeV that can only be obtained in the weak-scale MSSM with fairly heavy superpartners casts serious doubt on naturalness. It does, however, point in the direction of a different paradigm in the MSSM known as Split SUSY, where only the superpartners that are potential dark matter candidates are light. We present a simple realization of a modification of Split SUSY, called Mini-Split SUSY, where all of the superpartner masses are determined by just one parameter. We show that it easily accommodates the Higgs mass, preserves gauge coupling unification, and has a good dark matter candidate. We then exploit the defining features of the Mini-Split framework to obtain a radiative solution to the flavor puzzle, where the hierarchy of SM particle masses is explained by successive orders of quantum corrections.

Successful collection of stool samples for microbiome analyses from a large community-based population of elderly men.

PubMed

Abrahamson, Melanie; Hooker, Elizabeth; Ajami, Nadim J; Petrosino, Joseph F; Orwoll, Eric S

2017-09-01

The relationship of the gastrointestinal microbiome to health and disease is of major research interest, including the effects of the gut microbiota on age related conditions. Here we report on the outcome of a project to collect stool samples on a large number of community dwelling elderly men using the OMNIgene-GUT stool/feces collection kit (OMR-200, DNA Genotek, Ottawa, Canada). Among 1,328 men who were eligible for stool collection, 982 (74%) agreed to participate and 951 submitted samples. The collection process was reported to be acceptable, almost all samples obtained were adequate, the process of sample handling by mail was uniformly successful. The DNA obtained provided excellent results in microbiome analyses, yielding an abundance of species and a diversity of taxa as would be predicted. Our results suggest that population studies of older participants involving remote stool sample collection are feasible. These approaches would allow large scale research projects of the association of the gut microbiota with important clinical outcomes.

Comparison between geodetic and oceanographic approaches to estimate mean dynamic topography for vertical datum unification: evaluation at Australian tide gauges

NASA Astrophysics Data System (ADS)

Filmer, M. S.; Hughes, C. W.; Woodworth, P. L.; Featherstone, W. E.; Bingham, R. J.

2018-04-01

The direct method of vertical datum unification requires estimates of the ocean's mean dynamic topography (MDT) at tide gauges, which can be sourced from either geodetic or oceanographic approaches. To assess the suitability of different types of MDT for this purpose, we evaluate 13 physics-based numerical ocean models and six MDTs computed from observed geodetic and/or ocean data at 32 tide gauges around the Australian coast. We focus on the viability of numerical ocean models for vertical datum unification, classifying the 13 ocean models used as either independent (do not contain assimilated geodetic data) or non-independent (do contain assimilated geodetic data). We find that the independent and non-independent ocean models deliver similar results. Maximum differences among ocean models and geodetic MDTs reach >150 mm at several Australian tide gauges and are considered anomalous at the 99% confidence level. These differences appear to be of geodetic origin, but without additional independent information, or formal error estimates for each model, some of these errors remain inseparable. Our results imply that some ocean models have standard deviations of differences with other MDTs (using geodetic and/or ocean observations) at Australian tide gauges, and with levelling between some Australian tide gauges, of ˜ ± 50 mm . This indicates that they should be considered as an alternative to geodetic MDTs for the direct unification of vertical datums. They can also be used as diagnostics for errors in geodetic MDT in coastal zones, but the inseparability problem remains, where the error cannot be discriminated between the geoid model or altimeter-derived mean sea surface.

Pushing HTCondor and glideinWMS to 200K+ Jobs in a Global Pool for CMS before Run 2

DOE Office of Scientific and Technical Information (OSTI.GOV)

Balcas, J.; Belforte, S.; Bockelman, B.

2015-12-23

The CMS experiment at the LHC relies on HTCondor and glideinWMS as its primary batch and pilot-based Grid provisioning system. So far we have been running several independent resource pools, but we are working on unifying them all to reduce the operational load and more effectively share resources between various activities in CMS. The major challenge of this unification activity is scale. The combined pool size is expected to reach 200K job slots, which is significantly bigger than any other multi-user HTCondor based system currently in production. To get there we have studied scaling limitations in our existing pools, themore » biggest of which tops out at about 70K slots, providing valuable feedback to the development communities, who have responded by delivering improvements which have helped us reach higher and higher scales with more stability. We have also worked on improving the organization and support model for this critical service during Run 2 of the LHC. This contribution will present the results of the scale testing and experiences from the first months of running the Global Pool.« less

A large-scale forest fragmentation experiment: the Stability of Altered Forest Ecosystems Project.

PubMed

Ewers, Robert M; Didham, Raphael K; Fahrig, Lenore; Ferraz, Gonçalo; Hector, Andy; Holt, Robert D; Kapos, Valerie; Reynolds, Glen; Sinun, Waidi; Snaddon, Jake L; Turner, Edgar C

2011-11-27

Opportunities to conduct large-scale field experiments are rare, but provide a unique opportunity to reveal the complex processes that operate within natural ecosystems. Here, we review the design of existing, large-scale forest fragmentation experiments. Based on this review, we develop a design for the Stability of Altered Forest Ecosystems (SAFE) Project, a new forest fragmentation experiment to be located in the lowland tropical forests of Borneo (Sabah, Malaysia). The SAFE Project represents an advance on existing experiments in that it: (i) allows discrimination of the effects of landscape-level forest cover from patch-level processes; (ii) is designed to facilitate the unification of a wide range of data types on ecological patterns and processes that operate over a wide range of spatial scales; (iii) has greater replication than existing experiments; (iv) incorporates an experimental manipulation of riparian corridors; and (v) embeds the experimentally fragmented landscape within a wider gradient of land-use intensity than do existing projects. The SAFE Project represents an opportunity for ecologists across disciplines to participate in a large initiative designed to generate a broad understanding of the ecological impacts of tropical forest modification.

A large-scale forest fragmentation experiment: the Stability of Altered Forest Ecosystems Project

PubMed Central

Ewers, Robert M.; Didham, Raphael K.; Fahrig, Lenore; Ferraz, Gonçalo; Hector, Andy; Holt, Robert D.; Kapos, Valerie; Reynolds, Glen; Sinun, Waidi; Snaddon, Jake L.; Turner, Edgar C.

2011-01-01

Opportunities to conduct large-scale field experiments are rare, but provide a unique opportunity to reveal the complex processes that operate within natural ecosystems. Here, we review the design of existing, large-scale forest fragmentation experiments. Based on this review, we develop a design for the Stability of Altered Forest Ecosystems (SAFE) Project, a new forest fragmentation experiment to be located in the lowland tropical forests of Borneo (Sabah, Malaysia). The SAFE Project represents an advance on existing experiments in that it: (i) allows discrimination of the effects of landscape-level forest cover from patch-level processes; (ii) is designed to facilitate the unification of a wide range of data types on ecological patterns and processes that operate over a wide range of spatial scales; (iii) has greater replication than existing experiments; (iv) incorporates an experimental manipulation of riparian corridors; and (v) embeds the experimentally fragmented landscape within a wider gradient of land-use intensity than do existing projects. The SAFE Project represents an opportunity for ecologists across disciplines to participate in a large initiative designed to generate a broad understanding of the ecological impacts of tropical forest modification. PMID:22006969

Towards Anatomic Scale Agent-Based Modeling with a Massively Parallel Spatially Explicit General-Purpose Model of Enteric Tissue (SEGMEnT_HPC)

PubMed Central

Cockrell, Robert Chase; Christley, Scott; Chang, Eugene; An, Gary

2015-01-01

Perhaps the greatest challenge currently facing the biomedical research community is the ability to integrate highly detailed cellular and molecular mechanisms to represent clinical disease states as a pathway to engineer effective therapeutics. This is particularly evident in the representation of organ-level pathophysiology in terms of abnormal tissue structure, which, through histology, remains a mainstay in disease diagnosis and staging. As such, being able to generate anatomic scale simulations is a highly desirable goal. While computational limitations have previously constrained the size and scope of multi-scale computational models, advances in the capacity and availability of high-performance computing (HPC) resources have greatly expanded the ability of computational models of biological systems to achieve anatomic, clinically relevant scale. Diseases of the intestinal tract are exemplary examples of pathophysiological processes that manifest at multiple scales of spatial resolution, with structural abnormalities present at the microscopic, macroscopic and organ-levels. In this paper, we describe a novel, massively parallel computational model of the gut, the Spatially Explicitly General-purpose Model of Enteric Tissue_HPC (SEGMEnT_HPC), which extends an existing model of the gut epithelium, SEGMEnT, in order to create cell-for-cell anatomic scale simulations. We present an example implementation of SEGMEnT_HPC that simulates the pathogenesis of ileal pouchitis, and important clinical entity that affects patients following remedial surgery for ulcerative colitis. PMID:25806784

Axion predictions in SO(10) × U(1)PQ models

NASA Astrophysics Data System (ADS)

Ernst, Anne; Ringwald, Andreas; Tamarit, Carlos

2018-02-01

Non-supersymmetric Grand Unified SO(10) × U(1)PQ models have all the ingredients to solve several fundamental problems of particle physics and cosmology — neutrino masses and mixing, baryogenesis, the non-observation of strong CP violation, dark matter, inflation — in one stroke. The axion — the pseudo Nambu-Goldstone boson arising from the spontaneous breaking of the U(1)PQ Peccei-Quinn symmetry — is the prime dark matter candidate in this setup. We determine the axion mass and the low energy couplings of the axion to the Standard Model particles, in terms of the relevant gauge symmetry breaking scales. We work out the constraints imposed on the latter by gauge coupling unification. We discuss the cosmological and phenomenological implications.

CHAIRMEN'S PREFACE AND EDITORS' NOTE: Unification of Fundamental Interactions

NASA Astrophysics Data System (ADS)

Brink, Lars; Nilsson, Jan S.; Salomonson, Per; Skagerstam, Bo-Sture

1987-01-01

Chairmen's PrefaceIn 1984 we obtained a grant from the Nobel Foundation to organize a Nobel Symposium on "Unification of the Fundamental Interactions". In our proposal which we submitted in the fall of 1983 we stated that we wanted to cover the various attempts to unification such as GUT'S, supergravity, Kaluza-Klein theories and superstrings. What has happened in particle physics since then is already history. With the realization that certain superstring theories could be anomaly free, it became clear that these models could encompass earlier attempts to unification as well as solving the fundamental problem of quantum gravity. The excitement that some of us had felt for some time now spread through most of the particle physics community and this excitement certainly was evident during the Symposium. With the international advisory committee we originally chose a list of around 30 invitees which could best represent the various subjects listed above. When it came to the final planning of the programme essentially all talks dealt with superstrings! We were very fortunate that almost all of the invitees managed to come to the Symposium. From the western world only three were unable to participate, André Neveu, Steven Weinberg and Bruno Zumino. We certainly missed them during the meeting. We were particularly happy that Stephen Hawking managed to take part actively. Our real problem was to get participants from the Soviet Union. Out of eight invitations only one came through. We were very happy to have Renata Kallosh, who really did her utmost to enlighten us about not only her own work but also about recent progress in the USSR, However, we were very sorry that in spite of all our letters, telegrammes and endless attempts to get telephone calls through and despite the good relations between the Swedish and Soviet Academies of Sciences we had to miss Ludwig Faddeev, Valodja Gribov, Andrej Linde, Victor Ogievetsky, Sasha Polyakov, Misha Shifman and Arkadij Vainshtein. We had hoped that the Nobel Symposium should be a signal for improved relations between East and West, but in this respect we failed. The Symposium was held in the small town of Marstrand, a summer resort on an island outside Göteborg. The idea was to have it relatively close to home and to show the participants perhaps the best part of the local nature. Another motive was to keep the participants semi-isolated to provide ample time for discussions. With the somewhat heavy programme we found that even so, the days were not long enough. This Symposium was the second Nobel Symposium on elementary particle physics. The first one, also organized by our group, was held in 1968. We hope and believe that the next one need not be awaited another 18 years! The Symposium was made possible by a generous grant from the Nobel Foundation. An additional grant from the Royal Swedish Academy of Sciences was also essential. A grant from Nordita made it possible to invite some ten Nordic observers. We also gratefully acknowledge help with the organization of the Symposium from the city of Goteborg, the city of Kungälv, Volvo, Skandinaviska Enskilda banken, Ericsson AB and IBM Sweden. We thank all the participants for all their efforts, to come to our remote part of the world, to give excellent talks, to write up their talks astonishingly quickly and to share with us so much of their knowledge and expertise. Last but not least we are indebted to the members of the organizing committee, members of the group and the secretarial staff. Goteborg, August 1986 Editors' NoteIn these Proceedings the lectures are given in the order of their oral presentation at the Symposium. Regrettably, a few contributors could not participate (V. Gribov, A. Linde, V. Ogievetsky, M. Shifman and A. M. Polyakov). Their contributions have been placed close to the end of the Proceedings. As these authors did not have the opportunity of correcting the proofs, responsibility for printing errors must rest with the Editors. It is a pleasure to thank all the authors for their enthusiastic and rapid response in our efforts to bring the contributions to the stage of printing. Without the efficient and fruitful collaboration with Physica Scripta the publication of these Proceedings would have been substantially delayed.

Unification Principle and a Geometric Field Theory

NASA Astrophysics Data System (ADS)

Wanas, Mamdouh I.; Osman, Samah N.; El-Kholy, Reham I.

2015-08-01

In the context of the geometrization philosophy, a covariant field theory is constructed. The theory satisfies the unification principle. The field equations of the theory are constructed depending on a general differential identity in the geometry used. The Lagrangian scalar used in the formalism is neither curvature scalar nor torsion scalar, but an alloy made of both, the W-scalar. The physical contents of the theory are explored depending on different methods. The analysis shows that the theory is capable of dealing with gravity, electromagnetism and material distribution with possible mutual interactions. The theory is shown to cover the domain of general relativity under certain conditions.

By design: James Clerk Maxwell and the evangelical unification of science.

PubMed

Stanley, Matthew

2012-03-01

James Clerk Maxwell's electromagnetic theory famously unified many of the Victorian laws of physics. This essay argues that Maxwell saw a deep theological significance in the unification of physical laws. He postulated a variation on the design argument that focused on the unity of phenomena rather than Paley's emphasis on complexity. This argument of Maxwell's is shown to be connected to his particular evangelical religious views. His evangelical perspective provided encouragement for him to pursue a unified physics that supplemented his other philosophical, technical and social influences. Maxwell's version of the argument from design is also contrasted with modern 'intelligent-design' theory.

Magnetic conveyor belt for transporting and merging trapped atom clouds.

PubMed

Hänsel, W; Reichel, J; Hommelhoff, P; Hänsch, T W

2001-01-22

We demonstrate an integrated magnetic device which transports cold atoms near a surface with very high positioning accuracy. Time-dependent currents in a lithographic conductor pattern create a moving chain of potential wells; atoms are transported in these wells while remaining confined in all three dimensions. We achieve mean fluxes up to 10(6) s(-1) with a negligible heating rate. An extension of this device allows merging of atom clouds by unification of two Ioffe-Pritchard potentials. The unification, which we demonstrate experimentally, can be performed without loss of phase space density. This novel, all-magnetic atom manipulation offers exciting perspectives, such as trapped-atom interferometry.

Divided Countries, Divided Mind 1: Psycho-Social Issues in Adaptation Problems of North Korean Defectors

PubMed Central

2008-01-01

A review of studies on the adaptation problems of North Korean defectors in South Korean society and studies of people's adaptation to political and cultural changes in other countries suggests that similar adaptation problems may occur in the process of and after unification. Defectors have various adaptation problems and some of them have psychiatric disorders such as depression and post-traumatic stress disorder (PTSD). The reasons for this were revealed to be the difference in the culture and personality between South and North Korea, which have developed for the last 60 years without any communication with each other, in spite of their common racial and cultural heritage. Economic factors including the lack of skills and knowledge for working at industrialized and competitive society like South Korean society, also aggravate the severity of such adaptation problems. Research on defectors' adaptation problems and on the differences in the culture and mentality between North and South Korea can provide useful information on what kinds of problems may arise during the process of and after unification and what should be done to achieve mutual adaptation and harmonious and peaceful unification. PMID:20046402

A Strategy Toward Reconstructing the Healthcare System of a Unified Korea

PubMed Central

Lee, Yo Han; Kim, Seok Hyang; Shin, Hyun-Woung; Lee, Jin Yong; Kim, Beomsoo; Kim, Young Ae; Yoon, Jangho; Shin, Young Seok

2013-01-01

This road map aims to establish a stable and integrated healthcare system for the Korean Peninsula by improving health conditions and building a foundation for healthcare in North Korea through a series of effective healthcare programs. With a basic time frame extending from the present in stages towards unification, the roadmap is composed of four successive phases. The first and second phases, each expected to last five years, respectively, focus on disease treatment and nutritional treatment. These phases would thereby safeguard the health of the most vulnerable populations in North Korea, while fulfilling the basic health needs of other groups by modernizing existing medical facilities. Based on the gains of the first two phases, the third phase, for ten years, would prepare for unification of the Koreas by promoting the health of all the North Korean people and improving basic infrastructural elements such as health workforce capacity and medical institutions. The fourth phase, assuming that unification will take place, provides fundamental principles and directions for establishing an integrated healthcare system across the Korean Peninsula. We are hoping to increase the consistency of the program and overcome several existing concerns of the current program with this roadmap. PMID:23766871

A strategy toward reconstructing the healthcare system of a unified Korea.

PubMed

Lee, Yo Han; Yoon, Seok-Jun; Kim, Seok Hyang; Shin, Hyun-Woung; Lee, Jin Yong; Kim, Beomsoo; Kim, Young Ae; Yoon, Jangho; Shin, Young Seok

2013-05-01

This road map aims to establish a stable and integrated healthcare system for the Korean Peninsula by improving health conditions and building a foundation for healthcare in North Korea through a series of effective healthcare programs. With a basic time frame extending from the present in stages towards unification, the roadmap is composed of four successive phases. The first and second phases, each expected to last five years, respectively, focus on disease treatment and nutritional treatment. These phases would thereby safeguard the health of the most vulnerable populations in North Korea, while fulfilling the basic health needs of other groups by modernizing existing medical facilities. Based on the gains of the first two phases, the third phase, for ten years, would prepare for unification of the Koreas by promoting the health of all the North Korean people and improving basic infrastructural elements such as health workforce capacity and medical institutions. The fourth phase, assuming that unification will take place, provides fundamental principles and directions for establishing an integrated healthcare system across the Korean Peninsula. We are hoping to increase the consistency of the program and overcome several existing concerns of the current program with this roadmap.

Geoid modeling in Mexico and the collaboration with Central America and the Caribbean.

NASA Astrophysics Data System (ADS)

Avalos, D.; Gomez, R.

2012-12-01

The model of geoidal heights for Mexico, named GGM10, is presented as a geodetic tool to support vertical positioning in the context of regional height system unification. It is a purely gravimetric solution computed by the Stokes-Helmert technique in resolution of 2.5 arc minutes. This product from the Instituto Nacional de Estadistica y Geografia (INEGI) is released together with a series of 10 gravimetric models which add to the improvements in description of the gravity field. In the recent years, the INEGI joined the initiative of the U.S. National Geodetic Survey and the Canada's Geodetic Survey Division to promote the regional height system unification. In an effort to further improve the compatibility among national geoid models in the region, the INEGI has begun to champion a network of specialists that includes national representatives from Central America and the Caribbean. Through the opening of opportunities for training and more direct access to international agreements and discussions, the tropical region is gaining participation. Now a significantly increased number of countries is pushing for a future North and Central American geoid-based vertical datum as support of height system unification.eoidal height in Mexico, mapped from the model GGM10.

Hilltop supernatural inflation and SUSY unified models

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kohri, Kazunori; Lim, C.S.; Lin, Chia-Min

2014-01-01

In this paper, we consider high scale (100TeV) supersymmetry (SUSY) breaking and realize the idea of hilltop supernatural inflation in concrete particle physics models based on flipped-SU(5)and Pati-Salam models in the framework of supersymmetric grand unified theories (SUSY GUTs). The inflaton can be a flat direction including right-handed sneutrino and the waterfall field is a GUT Higgs. The spectral index is n{sub s} = 0.96 which fits very well with recent data by PLANCK satellite. There is no both thermal and non-thermal gravitino problems. Non-thermal leptogenesis can be resulted from the decay of right-handed sneutrino which plays (part of) themore » role of inflaton.« less

Non-universal Z‧ from fluxed GUTs

NASA Astrophysics Data System (ADS)

Crispim Romao, Miguel; King, Stephen F.; Leontaris, George K.

2018-07-01

We make a first systematic study of non-universal TeV scale neutral gauge bosons Z‧ arising naturally from a class of F-theory inspired models broken via SU (5) by flux. The phenomenological models we consider may originate from semi-local F-theory GUTs arising from a single E8 point of local enhancement, assuming the minimal Z2 monodromy in order to allow for a renormalisable top quark Yukawa coupling. We classify such non-universal anomaly-free U(1) ‧ models requiring a minimal low energy spectrum and also allowing for a vector-like family. We discuss to what extent such models can account for the anomalous B-decay ratios RK and RK*.

Postprandial remodeling of the gut microbiota in Burmese pythons

PubMed Central

Costello, Elizabeth K.; Gordon, Jeffrey I.; Secor, Stephen M.; Knight, Rob

2014-01-01

The vertebrate gut microbiota evolved in an environment typified by periodic fluctuations in nutrient availability, yet little is known about its responses to host feeding and fasting. Because many model species (e.g., mice) are adapted to lifestyles of frequent small meals, we turned to the Burmese python, a sit-and-wait foraging snake that consumes large prey at long intervals (>1 month), to examine the effects of a dynamic nutrient milieu on the gut microbiota. We employed multiplexed 16S rRNA gene pyrosequencing to characterize bacterial communities harvested from the intestines of fasted and digesting snakes, and from their rodent meal. In this unprecedented survey of a reptilian host, we found that Bacteroidetes and Firmicutes numerically dominated the python gut. In the large intestine, fasting was associated with increased abundances of the genera Bacteroides, Rikenella, Synergistes, and Akkermansia, and reduced overall diversity. A marked postprandial shift in bacterial community configuration occurred. Between 12 hours and 3 days after feeding, Firmicutes, including the taxa Clostridium, Lactobacillus, and Peptostreptococcaceae, gradually outnumbered the fasting-dominant Bacteroidetes, and overall ‘species’-level diversity increased significantly. Most lineages appeared to be indigenous to the python rather than ingested with the meal, but a dietary source of Lactobacillus could not be ruled out. Thus, the observed large-scale alterations of the gut microbiota that accompany the Burmese python's own dramatic physiological and morphological changes during feeding and fasting emphasize the need to consider both microbial and host cellular responses to nutrient flux. The Burmese python may provide a unique model for dissecting these interrelationships. PMID:20520652

The bamboo-eating giant panda harbors a carnivore-like gut microbiota, with excessive seasonal variations.

PubMed

Xue, Zhengsheng; Zhang, Wenping; Wang, Linghua; Hou, Rong; Zhang, Menghui; Fei, Lisong; Zhang, Xiaojun; Huang, He; Bridgewater, Laura C; Jiang, Yi; Jiang, Chenglin; Zhao, Liping; Pang, Xiaoyan; Zhang, Zhihe

2015-05-19

The giant panda evolved from omnivorous bears. It lives on a bamboo-dominated diet at present, but it still retains a typical carnivorous digestive system and is genetically deficient in cellulose-digesting enzymes. To find out whether this endangered mammalian species, like other herbivores, has successfully developed a gut microbiota adapted to its fiber-rich diet, we conducted a 16S rRNA gene-based large-scale structural profiling of the giant panda fecal microbiota. Forty-five captive individuals were sampled in spring, summer, and late autumn within 1 year. Significant intraindividual variations in the diversity and structure of gut microbiota across seasons were observed in this population, which were even greater than the variations between individuals. Compared with published data sets involving 124 gut microbiota profiles from 54 mammalian species, these giant pandas, together with 9 captive and 7 wild individuals investigated previously, showed extremely low gut microbiota diversity and an overall structure that diverged from those of nonpanda herbivores but converged with those of carnivorous and omnivorous bears. The giant panda did not harbor putative cellulose-degrading phylotypes such as Ruminococcaceae and Bacteroides bacteria that are typically enriched in other herbivores, but instead, its microbiota was dominated by Escherichia/Shigella and Streptococcus bacteria. Members of the class Clostridia were common and abundant in the giant panda gut microbiota, but most of the members present were absent in other herbivores and were not phylogenetically related with known cellulolytic lineages. Therefore, the giant panda appears not to have evolved a gut microbiota compatible with its newly adopted diet, which may adversely influence the coevolutionary fitness of this herbivore. The giant panda, an endangered mammalian species endemic to western China, is well known for its unique bamboo diet. Unlike other herbivores that have successfully evolved anatomically specialized digestive systems to efficiently deconstruct fibrous plant matter, the giant panda still retains a gastrointestinal tract typical of carnivores. We characterized the fecal bacterial communities from a giant panda population to determine whether this animal relies on its symbiotic gut microbiota to cope with the complex carbohydrates that dominate its diet, as is common in other herbivores. We found that the giant panda gut microbiota is low in diversity and highly variable across seasons. It also shows an overall composition typical of bears and entirely differentiated from other herbivores, with low levels of putative cellulose-digesting bacteria. The gut microbiota of this herbivore, therefore, may not have well adapted to its highly fibrous diet, suggesting a potential link with its poor digestive efficiency. Copyright © 2015 Xue et al.

Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study.

PubMed

Kang, Dae-Wook; Adams, James B; Gregory, Ann C; Borody, Thomas; Chittick, Lauren; Fasano, Alessio; Khoruts, Alexander; Geis, Elizabeth; Maldonado, Juan; McDonough-Means, Sharon; Pollard, Elena L; Roux, Simon; Sadowsky, Michael J; Lipson, Karen Schwarzberg; Sullivan, Matthew B; Caporaso, J Gregory; Krajmalnik-Brown, Rosa

2017-01-23

Autism spectrum disorders (ASD) are complex neurobiological disorders that impair social interactions and communication and lead to restricted, repetitive, and stereotyped patterns of behavior, interests, and activities. The causes of these disorders remain poorly understood, but gut microbiota, the 10 13 bacteria in the human intestines, have been implicated because children with ASD often suffer gastrointestinal (GI) problems that correlate with ASD severity. Several previous studies have reported abnormal gut bacteria in children with ASD. The gut microbiome-ASD connection has been tested in a mouse model of ASD, where the microbiome was mechanistically linked to abnormal metabolites and behavior. Similarly, a study of children with ASD found that oral non-absorbable antibiotic treatment improved GI and ASD symptoms, albeit temporarily. Here, a small open-label clinical trial evaluated the impact of Microbiota Transfer Therapy (MTT) on gut microbiota composition and GI and ASD symptoms of 18 ASD-diagnosed children. MTT involved a 2-week antibiotic treatment, a bowel cleanse, and then an extended fecal microbiota transplant (FMT) using a high initial dose followed by daily and lower maintenance doses for 7-8 weeks. The Gastrointestinal Symptom Rating Scale revealed an approximately 80% reduction of GI symptoms at the end of treatment, including significant improvements in symptoms of constipation, diarrhea, indigestion, and abdominal pain. Improvements persisted 8 weeks after treatment. Similarly, clinical assessments showed that behavioral ASD symptoms improved significantly and remained improved 8 weeks after treatment ended. Bacterial and phagedeep sequencing analyses revealed successful partial engraftment of donor microbiota and beneficial changes in the gut environment. Specifically, overall bacterial diversity and the abundance of Bifidobacterium, Prevotella, and Desulfovibrio among other taxa increased following MTT, and these changes persisted after treatment stopped (followed for 8 weeks). This exploratory, extended-duration treatment protocol thus appears to be a promising approach to alter the gut microbiome and virome and improve GI and behavioral symptoms of ASD. Improvements in GI symptoms, ASD symptoms, and the microbiome all persisted for at least 8 weeks after treatment ended, suggesting a long-term impact. This trial was registered on the ClinicalTrials.gov, with the registration number  NCT02504554.

Strings: A possible alternative explanation for the Unification of Gravitation Field and Electromagnetic Field

NASA Astrophysics Data System (ADS)

Rivera, Susana

Throughout the last century, since the last decades of the XIX century, until present day, there had been many attempts to achieve the unification of the Forces of Nature. First unification was done by James Clerk Maxwell, with his Electromagnetic Theory. Then Max Plank developed his Quantum Theory. In 1905, Albert Einstein gave birth to the Special Relativity Theory, and in 1916 he came out with his General Relativity Theory. He noticed that there was an evident parallelism between the Gravitational Force, and the Electromagnetic Force. So, he tried to unify these forces of Nature. But Quantum Theory interposed on his way. On the 1940’s it had been developed the Quantum Electrodynamics (QED), and with it, the unified field theory had an arise interest. On the 60’s and 70’s there was developed the Quantum Chromodynamics (QCD). Along with these theories came the discovery of the strong interaction force and weak interaction force. And though there had been many attempts to unify all these forces of the nature, it could only be achieved the Unification of strong interaction, weak interaction and Electromagnetic Force. On the late 80”s and throughout the last two decades, theories such as “super-string theory”, “or the “M-theory”, among others, groups of Scientists, had been doing grand efforts and finally they came out with the unification of the forces of nature, being the only limitation the use of more than 11 dimensions. Using an ingenious mathematical tool known as the super symmetries, based on the Kaluza - Klein work, they achieve this goal. The strings of these theories are in the rank of 10-33 m. Which make them undetectable. There are many other string theories. The GEUFT theory is based on the existence of concentrated energy lines, which vibrates, expands and contracts, submitting and absorbing energy, matter and antimatter, and which yields a determined geometry, that gives as a result the formation of stars, galaxies, nebulae, clusters on the Macrocosmic level, and that allows the formation of fundamental particles on the Microcosmic level. The strings are described by a function named Symbiosis (σ), which depends on four energetic contributions: (1) Radiation Energy (2) Plasma Energy (3) Conducted Flux Energy and (4) Mass Energy. There is an intimate relation between them, and depending on the value they have at a certain moment and at a certain time, the string dynamics and its geometry are settled. That means that symbiosis describes the strings state in any point of the geometer - energy field. σ = F [Er(σ), Ep(σ), Ef(σ), Em(σ)] (1) This work is an attempt to achieve the unification of the forces of nature, based on the existence of a four dimension Universe.

Neutralino pair production at the photon-photon collider for the τ̃-coannihilation scenario

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sonmez, Nasuf, E-mail: nsonmez@cern.ch

Supersymmetry (SUSY) is a theory which gives an explanation for the strong and electroweak interactions from the grand unification scale down to the weak scale. The search for supersymmetric particles still continues at full speed at the LHC without success. The main task at the ILC is complementing the LHC result and also search for new physics. In this study, the neutralino pair production via photon-photon collision is studied for the t̃-coannihilation scenario in the context of MSSM at the ILC. In the calculation, all the possible one loop diagrams are taken into account for the photon-photon interaction. We presentmore » the production cross section and distribution of various observables for the lightest and next-to-lightest neutralino pairs for benchmark models which are specifically presented in the light of LHC8 data analysis, employing these benchmark models for neutralino pair production could show the potential of the ILC concerning the dark matter searches in supersymmetry.« less

The Halo Occupation Distribution of obscured quasars: revisiting the unification model

NASA Astrophysics Data System (ADS)

Mitra, Kaustav; Chatterjee, Suchetana; DiPompeo, Michael A.; Myers, Adam D.; Zheng, Zheng

2018-06-01

We model the projected angular two-point correlation function (2PCF) of obscured and unobscured quasars selected using the Wide-field Infrared Survey Explorer (WISE), at a median redshift of z ˜ 1 using a five parameter Halo Occupation Distribution (HOD) parametrization, derived from a cosmological hydrodynamic simulation by Chatterjee et al. The HOD parametrization was previously used to model the 2PCF of optically selected quasars and X-ray bright active galactic nuclei (AGNs) at z ˜ 1. The current work shows that a single HOD parametrization can be used to model the population of different kinds of AGN in dark matter haloes suggesting the universality of the relationship between AGN and their host dark matter haloes. Our results show that the median halo mass of central quasar hosts increases from optically selected (4.1^{+0.3}_{-0.4} × 10^{12} h^{-1} M_{⊙}) and infra-red (IR) bright unobscured populations (6.3^{+6.2}_{-2.3} × 10^{12} h^{-1} M_{⊙}) to obscured quasars (10.0^{+2.6}_{-3.7} × 10^{12} h^{-1} M_{⊙}), signifying an increase in the degree of clustering. The projected satellite fractions also increase from optically bright to obscured quasars and tend to disfavour a simple `orientation only' theory of active galactic nuclei unification. Our results also show that future measurements of the small-scale clustering of obscured quasars can constrain current theories of galaxy evolution where quasars evolve from an IR-bright obscured phase to the optically bright unobscured phase.

Fermionic minimal dark matter in 5D gauge-Higgs unification

NASA Astrophysics Data System (ADS)

Maru, Nobuhito; Okada, Nobuchika; Okada, Satomi

2017-12-01

We propose a minimal dark matter (MDM) scenario in the context of a simple gauge-Higgs unification (GHU) model based on the gauge group S U (3 )×U (1 )' in five-dimensional Minkowski space with a compactification of the fifth dimension on the 1S/Z2 orbifold. A pair of vectorlike S U (3 ) multiplet fermions in a higher-dimensional representation is introduced in the bulk, and the DM particle is identified with the lightest mass eigenstate among the components in the multiplets. In the original model description, the DM particle communicates with the Standard Model (SM) particles only through the bulk gauge interaction, and hence our model is the GHU version of the MDM scenario. There are two typical realizations of the DM particle in four-dimensional effective theory: (i) the DM particle is mostly composed of the SM S U (2 )L multiplets, or (ii) the DM is mostly composed of the SM S U (2 )L singlets. Since the case (i) is very similar to the original MDM scenario, we focus on the case (ii), which is a realization of the Higgs-portal DM scenario in the context of the GHU model. We identify an allowed parameter region to be consistent with the current experimental constraints, which will be fully covered by the direct dark matter detection experiments in the near future. In the presence of the bulk multiplet fermions in higher-dimensional S U (3 ) representations, we reproduce the 125 GeV Higgs boson mass through the renormalization group evolution of Higgs quartic coupling with the compactification scale of 10-100 TeV.

Hierarchy problem and BSM physics

NASA Astrophysics Data System (ADS)

Bhattacharyya, Gautam

2017-10-01

The `hierarchy problem' plagues the Standard Model of particle physics. The source of this problem is our inability to answer the following question: Why is the Higgs mass so much below the GUT or Planck scale? A brief description about how `supersymmetry' and `composite Higgs' address this problem is given here.

Wilsonian dark matter in string derived Z' model

NASA Astrophysics Data System (ADS)

Delle Rose, L.; Faraggi, A. E.; Marzo, C.; Rizos, J.

2017-09-01

The dark matter issue is among the most perplexing in contemporary physics. The problem is more enigmatic due to the wide range of possible solutions, ranging from the ultralight to the supermassive. String theory gives rise to plausible dark matter candidates due to the breaking of the non-Abelian grand unified theory (GUT) symmetries by Wilson lines. The physical spectrum then contains states that do not satisfy the quantization conditions of the unbroken GUT symmetry. Given that the Standard Model states are identified with broken GUT representations, and provided that any ensuing symmetry breakings are induced by components of GUT states, a remnant discrete symmetry remains that forbids the decay of the Wilsonian states. A class of such states are obtained in a heterotic-string-derived Z' model. The model exploits the spinor-vector duality symmetry, observed in the fermionic Z2×Z2 heterotic-string orbifolds, to generate a Z'∈E6 symmetry that may remain unbroken down to low energies. The E6 symmetry is broken at the string level with discrete Wilson lines. The Wilsonian dark matter candidates in the string-derived model are S O (10 ), and hence Standard Model, singlets and possess non-E6 U(1)Z' charges. Depending on the U(1)Z' breaking scale and the reheating temperature they give rise to different scenarios for the relic abundance, and are in accordance with the cosmological constraints.

A proposal for unification of fatigue crack growth law

NASA Astrophysics Data System (ADS)

Kobelev, V.

2017-05-01

In the present paper, the new fractional-differential dependences of cycles to failure for a given initial crack length upon the stress amplitude in the linear fracture approach are proposed. The anticipated unified propagation function describes the infinitesimal crack length growths per increasing number of load cycles, supposing that the load ratio remains constant over the load history. Two unification fractional-differential functions with different number of fitting parameters are proposed. An alternative, threshold formulations for the fractional-differential propagation functions are suggested. The mean stress dependence is the immediate consequence from the considered laws. The corresponding formulas for crack length over the number of cycles are derived in closed form.

Unification of the family of Garrison-Wright's phases.

PubMed

Cui, Xiao-Dong; Zheng, Yujun

2014-07-24

Inspired by Garrison and Wight's seminal work on complex-valued geometric phases, we generalize the concept of Pancharatnam's "in-phase" in interferometry and further develop a theoretical framework for unification of the abelian geometric phases for a biorthogonal quantum system modeled by a parameterized or time-dependent nonhermitian hamiltonian with a finite and nondegenerate instantaneous spectrum, that is, the family of Garrison-Wright's phases, which will no longer be confined in the adiabatic and nonadiabatic cyclic cases. Besides, we employ a typical example, Bethe-Lamb model, to illustrate how to apply our theory to obtain an explicit result for the Garrison-Wright's noncyclic geometric phase, and also to present its potential applications in quantum computation and information.

The mind-body connection in irritable bowel syndrome: A randomised controlled trial of hypnotherapy as a treatment.

PubMed

Phillips-Moore, Julie S; Talley, Nicholas J; Jones, Michael P

2015-01-01

Hypnotherapy has been reported as being beneficial in the treatment of irritable bowel syndrome (IBS). We aimed to test the hypothesis that patients with IBS treated 'holistically' by hypnosis (i.e. by combined psychological and physiological symptom imagery) would have greater improvement in their IBS symptoms than patients treated by hypnosis using standard 'gut-directed' hypnotherapy, and both would be superior to simple relaxation therapy. Patients ( n  = 51) with Rome II criteria were randomised to 'individualised' (holistic) hypnotherapy, standard 'gut-directed' hypnotherapy or relaxation therapy for a period of 11 weeks with two follow-up assessments at 2 weeks and at 3 months after the completion of the trial. The primary outcome was bowel symptom severity scale (BSSS). All the participants in this study improved their IBS symptoms (pain, bloating, constipation and diarrhoea) and physical functioning at the end of the treatment from baseline, but this was not significantly different across the treatment arms. Neither 'individualised' nor 'gut-directed' hypnotherapy is superior to relaxation therapy in IBS.

Improving microbial fitness in the mammalian gut by in vivo temporal functional metagenomics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yaung, Stephanie J.; Deng, Luxue; Li, Ning

Elucidating functions of commensal microbial genes in the mammalian gut is challenging because many commensals are recalcitrant to laboratory cultivation and genetic manipulation. We present Temporal FUnctional Metagenomics sequencing (TFUMseq), a platform to functionally mine bacterial genomes for genes that contribute to fitness of commensal bacteria in vivo. Our approach uses metagenomic DNA to construct large-scale heterologous expression libraries that are tracked over time in vivo by deep sequencing and computational methods. To demonstrate our approach, we built a TFUMseq plasmid library using the gut commensal Bacteroides thetaiotaomicron (Bt) and introduced Escherichia coli carrying this library into germfree mice. Populationmore » dynamics of library clones revealed Bt genes conferring significant fitness advantages in E. coli over time, including carbohydrate utilization genes, with a Bt galactokinase central to early colonization, and subsequent dominance by a Bt glycoside hydrolase enabling sucrose metabolism coupled with co-evolution of the plasmid library and E. coli genome driving increased galactose utilization. Here, our findings highlight the utility of functional metagenomics for engineering commensal bacteria with improved properties, including expanded colonization capabilities in vivo.« less

Improving microbial fitness in the mammalian gut by in vivo temporal functional metagenomics

DOE PAGES

Yaung, Stephanie J.; Deng, Luxue; Li, Ning; ...

2015-03-11

Elucidating functions of commensal microbial genes in the mammalian gut is challenging because many commensals are recalcitrant to laboratory cultivation and genetic manipulation. We present Temporal FUnctional Metagenomics sequencing (TFUMseq), a platform to functionally mine bacterial genomes for genes that contribute to fitness of commensal bacteria in vivo. Our approach uses metagenomic DNA to construct large-scale heterologous expression libraries that are tracked over time in vivo by deep sequencing and computational methods. To demonstrate our approach, we built a TFUMseq plasmid library using the gut commensal Bacteroides thetaiotaomicron (Bt) and introduced Escherichia coli carrying this library into germfree mice. Populationmore » dynamics of library clones revealed Bt genes conferring significant fitness advantages in E. coli over time, including carbohydrate utilization genes, with a Bt galactokinase central to early colonization, and subsequent dominance by a Bt glycoside hydrolase enabling sucrose metabolism coupled with co-evolution of the plasmid library and E. coli genome driving increased galactose utilization. Here, our findings highlight the utility of functional metagenomics for engineering commensal bacteria with improved properties, including expanded colonization capabilities in vivo.« less

Effect of two bakery products on short-term food intake and gut-hormones in young adults: a pilot study.

PubMed

Santaliestra-Pasías, A M; Garcia-Lacarte, M; Rico, M C; Aguilera, C M; Moreno, L A

2015-08-01

The aim of this study is to compare the effect of conventional bread and a whole grain bread on appetite and energy intake, satiety and satiety gut-hormones. A randomized controlled crossover pilot study was carried out in 11 university students (age: 18.7 ± 0.9 years; body mass index: 22.7 ± 2.7 kg/m(2)). Participants consumed two different mid-morning cereal-based snacks, including a conventional or whole grain bread. Two testing days were completed, including satiety questionnaires, blood sampling and consumption of standardized breakfast, mid-morning test-snacks and ad libitum lunch. Several gut-hormones were analysed and satiation was assessed using Visual Analogue Scale scores. The consumption of whole grain bread increased satiety perception, decreased the remained energy intake during the testing day, and decreased the postprandial response of peptide YY, compared with conventional bread (p < 0.005). These data suggest that the consumption of whole grain bread might be a useful strategy to improve satiety.

Regulation of Lactobacillus casei Sorbitol Utilization Genes Requires DNA-Binding Transcriptional Activator GutR and the Conserved Protein GutM▿

PubMed Central

Alcántara, Cristina; Sarmiento-Rubiano, Luz Adriana; Monedero, Vicente; Deutscher, Josef; Pérez-Martínez, Gaspar; Yebra, María J.

2008-01-01

Sequence analysis of the five genes (gutRMCBA) downstream from the previously described sorbitol-6-phosphate dehydrogenase-encoding Lactobacillus casei gutF gene revealed that they constitute a sorbitol (glucitol) utilization operon. The gutRM genes encode putative regulators, while the gutCBA genes encode the EIIC, EIIBC, and EIIA proteins of a phosphoenolpyruvate-dependent sorbitol phosphotransferase system (PTSGut). The gut operon is transcribed as a polycistronic gutFRMCBA messenger, the expression of which is induced by sorbitol and repressed by glucose. gutR encodes a transcriptional regulator with two PTS-regulated domains, a galactitol-specific EIIB-like domain (EIIBGat domain) and a mannitol/fructose-specific EIIA-like domain (EIIAMtl domain). Its inactivation abolished gut operon transcription and sorbitol uptake, indicating that it acts as a transcriptional activator. In contrast, cells carrying a gutB mutation expressed the gut operon constitutively, but they failed to transport sorbitol, indicating that EIIBCGut negatively regulates GutR. A footprint analysis showed that GutR binds to a 35-bp sequence upstream from the gut promoter. A sequence comparison with the presumed promoter region of gut operons from various firmicutes revealed a GutR consensus motif that includes an inverted repeat. The regulation mechanism of the L. casei gut operon is therefore likely to be operative in other firmicutes. Finally, gutM codes for a conserved protein of unknown function present in all sequenced gut operons. A gutM mutant, the first constructed in a firmicute, showed drastically reduced gut operon expression and sorbitol uptake, indicating a regulatory role also for GutM. PMID:18676710

Grand unified brane world scenario

NASA Astrophysics Data System (ADS)

Arai, Masato; Blaschke, Filip; Eto, Minoru; Sakai, Norisuke

2017-12-01

We present a field theoretical model unifying grand unified theory (GUT) and brane world scenario. As a concrete example, we consider S U (5 ) GUT in 4 +1 dimensions where our 3 +1 dimensional spacetime spontaneously arises on five domain walls. A field-dependent gauge kinetic term is used to localize massless non-Abelian gauge fields on the domain walls and to assure the charge universality of matter fields. We find the domain walls with the symmetry breaking S U (5 )→S U (3 )×S U (2 )×U (1 ) as a global minimum and all the undesirable moduli are stabilized with the mass scale of MGUT. Profiles of massless standard model particles are determined as a consequence of wall dynamics. The proton decay can be exponentially suppressed.

Pseudosmooth tribrid inflation

NASA Astrophysics Data System (ADS)

Antusch, Stefan; Nolde, David; Rehman, Mansoor Ur

2012-08-01

We explore a new class of supersymmetric models of inflation where the inflaton is realised as a combination of a Higgs field and (gauge non-singlet) matter fields, using a ``tribrid'' structure of the superpotential. Inflation is associated with a phase transition around GUT scale energies. The inflationary trajectory already preselects the later vacuum after inflation, which has the advantage of automatically avoiding the production of dangerous topological defects at the end of inflation. While at first sight the models look similar to smooth inflation, they feature a waterfall and are therefore only pseudosmooth. The new class of models offers novel possibilities for realising inflation in close contact with particle physics, for instance with supersymmetric GUTs or with supersymmetric flavour models based on family symmetries.

Fish gut microbiota analysis differentiates physiology and behavior of invasive Asian carp and indigenous American fish

USGS Publications Warehouse

Ye, Lin; Amberg, Jon J.; Chapman, Duane C.; Gaikowski, Mark P.; Liu, Wen-Tso

2014-01-01

Gut microbiota of invasive Asian silver carp (SVCP) and indigenous planktivorous gizzard shad (GZSD) in Mississippi river basin were compared using 16S rRNA gene pyrosequencing. Analysis of more than 440 000 quality-filtered sequences obtained from the foregut and hindgut of GZSD and SVCP revealed high microbial diversity in these samples. GZSD hindgut (GZSD_H) samples (n=23) with >7000 operational taxonomy units (OTUs) exhibited the highest alpha-diversity indices followed by SVCP foregut (n=15), GZSD foregut (n=9) and SVCP hindgut (SVCP_H) (n=24). UniFrac distance-based non-metric multidimensional scaling (NMDS) analysis showed that the microbiota of GZSD_H and SVCP_H were clearly separated into two clusters: samples in the GZSD cluster were observed to vary by sampling location and samples in the SVCP cluster by sampling date. NMDS further revealed distinct microbial community between foregut to hindgut for individual GZSD and SVCP. Cyanobacteria, Proteobacteria, Actinobacteria and Bacteroidetes were detected as the predominant phyla regardless of fish or gut type. The high abundance of Cyanobacteria observed was possibly supported by their role as the fish’s major food source. Furthermore, unique and shared OTUs and OTUs in each gut type were identified, three OTUs from the order Bacteroidales, the genus Bacillariophyta and the genus Clostridium were found significantly more abundant in GZSD_H (14.9–22.8%) than in SVCP_H (0.13–4.1%) samples. These differences were presumably caused by the differences in the type of food sources including bacteria ingested, the gut morphology and digestion, and the physiological behavior between GZSD and SVCP.

[Laboratory unification: advantages and disadvantages for clinical microbiology].

PubMed

Andreu, Antonia; Matas, Lurdes

2010-10-01

This article aims to reflect on which areas or tasks of microbiology laboratories could be unified with those of clinical biochemistry, hematology, immunology or pathology laboratories to benefit patients and the health system, as well as the areas that should remain independent since their amalgamation would not only fail to provide a benefit but could even jeopardize the quality of microbiological diagnosis, and consequently patient care. To do this, the distinct analytic phases of diagnosis are analyzed, and the advantages and disadvantages of amalgamation are evaluated in each phase. The pros and cons of the unification of certain areas such as the computer system, occupational risk units, customer service, purchasing logistics, and materials storage, etc, are also discussed. Lastly, the effect of unification on urgent microbiology diagnosis is analyzed. Microbiological diagnosis should be unique. The microbiologist should perform an overall evaluation of the distinct techniques used for a particular patient, both those that involve direct diagnosis (staining, culture, antigen detection techniques or molecular techniques) and indirect diagnosis (antibody detection). Moreover, the microbiology laboratory should be independent, with highly trained technicians and specialists in microbiology that provide added value as experts in infection and as key figures in the process of establishing a correct etiological diagnosis. Copyright © 2010 Elsevier España S.L. All rights reserved.

a Heavy Higgs Boson from Flavor and Electroweak Symmetry Unification

NASA Astrophysics Data System (ADS)

Fabbrichesi, Marco

2005-08-01

We present a unified picture of flavor and electroweak symmetry breaking based on a nonlinear sigma model spontaneously broken at the TeV scale. Flavor and Higgs bosons arise as pseudo-Goldstone modes. Explicit collective symmetry breaking yields stable vacuum expectation values and masses protected at one loop by the little-Higgs mechanism. The coupling to the fermions generates well-definite mass textures--according to a U(1) global flavor symmetry--that correctly reproduce the mass hierarchies and mixings of quarks and leptons. The model is more constrained than usual little-Higgs models because of bounds on weak and flavor physics. The main experimental signatures testable at the LHC are a rather large mass mh0 = 317 ± 80 GeV for the (lightest) Higgs boson.

Earthquakes and sea level - Space and terrestrial metrology on a changing planet

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bilham, R.

1991-02-01

A review is presented of the stability and scale of crustal deformation metrology which has particular relevance to monitoring deformation associated with sea level and earthquakes. Developments in space geodesy and crustal deformation metrology in the last two decades have the potential to acquire a homogeneous global data set for monitoring relative horizontal and vertical motions of the earth's surface to within several millimeters. New tools discussed for forecasting sea level rise and damaging earthquakes include: very long baseline interferometry, satellite laser ranging, the principles of GPS geodesy, and new sea level sensors. Space geodesy permits a unified global basismore » for future metrology of the earth, and the continued availability of the GPS is currently fundamental to this unification.« less

Gut Microbiota-brain Axis

PubMed Central

Wang, Hong-Xing; Wang, Yu-Ping

2016-01-01

Objective: To systematically review the updated information about the gut microbiota-brain axis. Data Sources: All articles about gut microbiota-brain axis published up to July 18, 2016, were identified through a literature search on PubMed, ScienceDirect, and Web of Science, with the keywords of “gut microbiota”, “gut-brain axis”, and “neuroscience”. Study Selection: All relevant articles on gut microbiota and gut-brain axis were included and carefully reviewed, with no limitation of study design. Results: It is well-recognized that gut microbiota affects the brain's physiological, behavioral, and cognitive functions although its precise mechanism has not yet been fully understood. Gut microbiota-brain axis may include gut microbiota and their metabolic products, enteric nervous system, sympathetic and parasympathetic branches within the autonomic nervous system, neural-immune system, neuroendocrine system, and central nervous system. Moreover, there may be five communication routes between gut microbiota and brain, including the gut-brain's neural network, neuroendocrine-hypothalamic-pituitary-adrenal axis, gut immune system, some neurotransmitters and neural regulators synthesized by gut bacteria, and barrier paths including intestinal mucosal barrier and blood-brain barrier. The microbiome is used to define the composition and functional characteristics of gut microbiota, and metagenomics is an appropriate technique to characterize gut microbiota. Conclusions: Gut microbiota-brain axis refers to a bidirectional information network between the gut microbiota and the brain, which may provide a new way to protect the brain in the near future. PMID:27647198

Lepton jets and low-mass sterile neutrinos at hadron colliders

NASA Astrophysics Data System (ADS)

Dube, Sourabh; Gadkari, Divya; Thalapillil, Arun M.

2017-09-01

Sterile neutrinos, if they exist, are potential harbingers for physics beyond the Standard Model. They have the capacity to shed light on our flavor sector, grand unification frameworks, dark matter sector and origins of baryon antibaryon asymmetry. There have been a few seminal studies that have broached the subject of sterile neutrinos with low, electroweak-scale masses (i.e. ΛQCD≪mNR≪mW± ) and investigated their reach at hadron colliders using lepton jets. These preliminary studies nevertheless assume background-free scenarios after certain selection criteria which are overly optimistic and untenable in realistic situations. These lead to incorrect projections. The unique signal topology and challenging hadronic environment also make this mass-scale regime ripe for a careful investigation. With the above motivations, we attempt to perform the first systematic study of low, electroweak-scale, right-handed neutrinos at hadron colliders, in this unique signal topology. There are currently no active searches at hadron colliders for sterile neutrino states in this mass range, and we frame the study in the context of the 13 TeV high-luminosity Large Hadron Collider and the proposed FCC-hh/SppC 100 TeV p p -collider.

Dark matter, proton decay and other phenomenological constraints in F-SU(5)

NASA Astrophysics Data System (ADS)

Li, Tianjun; Maxin, James A.; Nanopoulos, Dimitri V.; Walker, Joel W.

2011-07-01

We study gravity mediated supersymmetry breaking in F-SU(5) and its low-energy supersymmetric phenomenology. The gaugino masses are not unified at the traditional grand unification scale, but we nonetheless have the same one-loop gaugino mass relation at the electroweak scale as minimal supergravity (mSUGRA). We introduce parameters testable at the colliders to measure the small second loop deviation from the mSUGRA gaugino mass relation at the electroweak scale. In the minimal SU(5) model with gravity mediated supersymmetry breaking, we show that the deviations from the mSUGRA gaugino mass relations are within 5%. However, in F-SU(5), we predict the deviations from the mSUGRA gaugino mass relations to be larger due to the presence of vector-like particles, which can be tested at the colliders. We determine the viable parameter space that satisfies all the latest experimental constraints and find it is consistent with the CDMS II experiment. Further, we compute the cross-sections of neutralino annihilations into gamma-rays and compare to the first published Fermi-LAT measurement. Finally, the corresponding range of proton lifetime predictions is calculated and found to be within reach of the future Hyper-Kamiokande and DUSEL experiments.

Subterranean gravity and other deep hole geophysics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stacey, F.D.

1983-01-01

The early history of the determination of the Newtonian gravitational constant, G, was closely linked with the developments of geodesy and gravity surveying. The current search for non-Newtonian effects that may provide an experimental guide to unification theories has led to our retracting some of this history. Modern geophysical techniques and facilities, using especially mines and deep ocean probes, permit absolute measurements of G for distance scales up to a few kilometers. Although the accuracy of the very long range determinations cannot equal that of the best laboratory measurements, they are crucial to assessment of the possibility of a scalemore » dependence of G. Preliminary data give values of G on a scale 100-1000 m biased about 1% higher than the laboratory value. Possibilities of systematic error compel us to question this apparently significant bias but it provides the incentive for better controlled large scale experiments. Several are in progress or under development. A particular difficulty concerns the measurement of in situ density. Even for hard rock, release from overburden pressure causes microcracks and pores to open. Natural pore closure is effective only with deep burial and for this reason there are advantages in deep instrument placement for several geophysical studies.« less

In vitro fermentation of alternansucrase raffinose acceptor products by human gut bacteria

USDA-ARS?s Scientific Manuscript database

In this work, in vitro fermentation of alternansucrase raffinose acceptor products, previously fractionated according to their degree of polymerization (DP; from DP4 to DP10) was carried out using pH-controlled small scale batch cultures at 37ºC under anaerobic conditions with human faeces. Bifidog...

Three-dimensional mechanisms of macro-to-micro-scale transport and absorption enhancement by gut villi motions

NASA Astrophysics Data System (ADS)

Wang, Yanxing; Brasseur, James G.

2017-06-01

We evaluate the potential for physiological control of intestinal absorption by the generation of "micromixing layers" (MMLs) induced by coordinated motions of mucosal villi coupled with lumen-scale "macro" eddying motions generated by gut motility. To this end, we apply a three-dimensional (3D) multigrid lattice-Boltzmann model of a lid-driven macroscale cavity flow with microscale fingerlike protuberances at the lower surface. Integrated with a previous 2D study of leaflike villi, we generalize to 3D the 2D mechanisms found there to enhance nutrient absorption by controlled villi motility. In three dimensions, increased lateral spacing within villi within groups that move axially with the macroeddy reduces MML strength and absorptive enhancement relative to two dimensions. However, lateral villi motions create helical 3D particle trajectories that enhance absorption rate to the level of axially moving 2D leaflike villi. The 3D enhancements are associated with interesting fundamental adjustments to 2D micro-macro-motility coordination mechanisms and imply a refined potential for physiological or pharmaceutical control of intestinal absorption.

Heavy-lifting of gauge theories by cosmic inflation

NASA Astrophysics Data System (ADS)

Kumar, Soubhik; Sundrum, Raman

2018-05-01

Future measurements of primordial non-Gaussianity can reveal cosmologically produced particles with masses of order the inflationary Hubble scale and their interactions with the inflaton, giving us crucial insights into the structure of fundamental physics at extremely high energies. We study gauge-Higgs theories that may be accessible in this regime, carefully imposing the constraints of gauge symmetry and its (partial) Higgsing. We distinguish two types of Higgs mechanisms: (i) a standard one in which the Higgs scale is constant before and after inflation, where the particles observable in non-Gaussianities are far heavier than can be accessed by laboratory experiments, perhaps associated with gauge unification, and (ii) a "heavy-lifting" mechanism in which couplings to curvature can result in Higgs scales of order the Hubble scale during inflation while reducing to far lower scales in the current era, where they may now be accessible to collider and other laboratory experiments. In the heavy-lifting option, renormalization-group running of terrestrial measurements yield predictions for cosmological non-Gaussianities. If the heavy-lifted gauge theory suffers a hierarchy problem, such as does the Standard Model, confirming such predictions would demonstrate a striking violation of the Naturalness Principle. While observing gauge-Higgs sectors in non-Gaussianities will be challenging given the constraints of cosmic variance, we show that it may be possible with reasonable precision given favorable couplings to the inflationary dynamics.

Building unified geospatial data for land-change modeling—A case study in the area of Richmond, Virginia

USGS Publications Warehouse

Donato, David I.; Shapiro, Jason L.

2016-12-13

An effort to build a unified collection of geospatial data for use in land-change modeling (LCM) led to new insights into the requirements and challenges of building an LCM data infrastructure. A case study of data compilation and unification for the Richmond, Va., Metropolitan Statistical Area (MSA) delineated the problems of combining and unifying heterogeneous data from many independent localities such as counties and cities. The study also produced conclusions and recommendations for use by the national LCM community, emphasizing the critical need for simple, practical data standards and conventions for use by localities. This report contributes an uncopyrighted core glossary and a much needed operational definition of data unification.

GUT Model Hierarchies from Intersecting Branes

NASA Astrophysics Data System (ADS)

Kokorelis, Christos

2002-08-01

By employing D6-branes intersecting at angles in D = 4 type I strings, we construct the first examples of three generation string GUT models (PS-A class), that contain at low energy exactly the standard model spectrum with no extra matter and/or extra gauge group factors. They are based on the group SU(4)C × SU(2)L × SU(2)R. The models are non-supersymmetric, even though SUSY is unbroken in the bulk. Baryon number is gauged and its anomalies are cancelled through a generalized Green-Schwarz mechanism. We also discuss models (PS-B class) which at low energy have the standard model augmented by an anomaly free U(1) symmetry and show that multibrane wrappings correspond to a trivial redefinition of the surviving global U(1) at low energies. There are no colour triplet couplings to mediate proton decay and proton is stable. The models are compatible with a low string scale of energy less that 650 GeV and are directly testable at present or future accelerators as they predict the existence of light left handed weak fermion doublets at energies between 90 and 246 GeV. The neutrinos get a mass through an unconventional see-saw mechanism. The mass relation me = md at the GUT scale is recovered. Imposing supersymmetry at particular intersections generates non-zero Majorana masses for right handed neutrinos as well providing the necessary singlets needed to break the surviving anomaly free U(1), thus suggesting a gauge symmetry breaking method that can be applied in general left-right symmetric models.

Dietary microbial phytase exerts mixed effects on the gut health of tilapia: a possible reason for the null effect on growth promotion.

PubMed

Hu, Jun; Ran, Chao; He, Suxu; Cao, Yanan; Yao, Bin; Ye, Yuantu; Zhang, Xuezhen; Zhou, Zhigang

2016-06-01

The present study evaluated the effects of dietary microbial phytase on the growth and gut health of hybrid tilapia (Oreochromis niloticus ♀×Oreochromis aureus ♂), focusing on the effect on intestinal histology, adhesive microbiota and expression of immune-related cytokine genes. Tilapia were fed either control diet or diet supplemented with microbial phytase (1000 U/kg). Each diet was randomly assigned to four groups of fish reared in cages (3×3×2 m). After 12 weeks of feeding, weight gain and feed conversion ratio of tilapia were not significantly improved by dietary microbial phytase supplementation. However, significantly higher level of P content in the scales, tighter and more regular intestinal mucosa folds were observed in the microbial phytase group and the microvilli density was significantly increased. The adhesive gut bacterial communities were strikingly altered by microbial phytase supplementation (0·41

Non-minimal quartic inflation in supersymmetric SO(10)

DOE PAGES

Leontaris, George K.; Okada, Nobuchika; Shafi, Qaisar

2016-12-16

Here, we describe how quartic (λφ 4) inflation with non-minimal coupling to gravity is realized in realistic supersymmetric SO(10)models. In a well-motivated example the 16 -more » $$\\overline{16}$$ Higgs multiplets, which break SO(10) to SU(5) and yield masses for the right-handed neutrinos, provide the inflaton field φ. Thus, leptogenesis is a natural outcome in this class of SO(10) models. Moreover, the adjoint (45-plet) Higgs also acquires a GUT scale value during inflation so that the monopole problem is evaded. The scalar spectral index n s in good agreement with the observations and r, the tensor to scalar ratio, is predicted for realistic values of GUT parameters to be of order 10 -3-10 -2.« less

Blueprints of the no-scale multiverse at the LHC

NASA Astrophysics Data System (ADS)

Li, Tianjun; Maxin, James A.; Nanopoulos, Dimitri V.; Walker, Joel W.

2011-09-01

We present a contemporary perspective on the String Landscape and the Multiverse of plausible string, M- and F-theory vacua. In contrast to traditional statistical classifications and capitulation to the anthropic principle, we seek only to demonstrate the existence of a nonzero probability for a universe matching our own observed physics within the solution ensemble. We argue for the importance of No-Scale Supergravity as an essential common underpinning for the spontaneous emergence of a cosmologically flat universe from the quantum “nothingness.” Concretely, we continue to probe the phenomenology of a specific model which is testable at the LHC and Tevatron. Dubbed No-Scale F-SU(5), it represents the intersection of the Flipped SU(5) Grand Unified Theory (GUT) with extra TeV-Scale vectorlike multiplets derived out of F-theory, and the dynamics of No-Scale Supergravity, which in turn imply a very restricted set of high-energy boundary conditions. By secondarily minimizing the minimum of the scalar Higgs potential, we dynamically determine the ratio tan⁡β≃15-20 of up- to down-type Higgs vacuum expectation values (VEVs), the universal gaugino boundary mass M1/2≃450GeV, and, consequently, also the total magnitude of the GUT-scale Higgs VEVs, while constraining the low-energy standard model gauge couplings. In particular, this local minimum minimorum lies within the previously described “golden strip,” satisfying all current experimental constraints. We emphasize, however, that the overarching goal is not to establish why our own particular universe possesses any number of specific characteristics, but rather to tease out what generic principles might govern the superset of all possible universes.

Unification of Intercontinental Height Systems based on the Fixed Geodetic Boundary Value Problem - A Case Study in Spherical Approximation

NASA Astrophysics Data System (ADS)

Grombein, T.; Seitz, K.; Heck, B.

2013-12-01

In general, national height reference systems are related to individual vertical datums defined by specific tide gauges. The discrepancy of these vertical datums causes height system biases that range in an order of 1-2 m at a global scale. Continental height systems can be connected by spirit leveling and gravity measurements along the leveling lines as performed for the definition of the European Vertical Reference Frame. In order to unify intercontinental height systems, an indirect connection is needed. For this purpose, global geopotential models derived from recent satellite missions like GOCE provide an important contribution. However, to achieve a highly-precise solution, a combination with local terrestrial gravity data is indispensable. Such combinations result in the solution of a Geodetic Boundary Value Problem (GBVP). In contrast to previous studies, mostly related to the traditional (scalar) free GBVP, the present paper discusses the use of the fixed GBVP for height system unification, where gravity disturbances instead of gravity anomalies are applied as boundary values. The basic idea of our approach is a conversion of measured gravity anomalies to gravity disturbances, where unknown datum parameters occur that can be associated with height system biases. In this way, the fixed GBVP can be extended by datum parameters for each datum zone. By evaluating the GBVP at GNSS/leveling benchmarks, the unknown datum parameters can be estimated in a least squares adjustment. Beside the developed theory, we present numerical results of a case study based on the spherical fixed GBVP and boundary values simulated by the use of the global geopotential model EGM2008. In a further step, the impact of approximations like linearization as well as topographic and ellipsoidal effects is taken into account by suitable reduction and correction terms.

Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon

PubMed Central

2014-01-01

Background Elucidating disease and developmental dysfunction requires understanding variation in phenotype. Single-species model organism anatomy ontologies (ssAOs) have been established to represent this variation. Multi-species anatomy ontologies (msAOs; vertebrate skeletal, vertebrate homologous, teleost, amphibian AOs) have been developed to represent ‘natural’ phenotypic variation across species. Our aim has been to integrate ssAOs and msAOs for various purposes, including establishing links between phenotypic variation and candidate genes. Results Previously, msAOs contained a mixture of unique and overlapping content. This hampered integration and coordination due to the need to maintain cross-references or inter-ontology equivalence axioms to the ssAOs, or to perform large-scale obsolescence and modular import. Here we present the unification of anatomy ontologies into Uberon, a single ontology resource that enables interoperability among disparate data and research groups. As a consequence, independent development of TAO, VSAO, AAO, and vHOG has been discontinued. Conclusions The newly broadened Uberon ontology is a unified cross-taxon resource for metazoans (animals) that has been substantially expanded to include a broad diversity of vertebrate anatomical structures, permitting reasoning across anatomical variation in extinct and extant taxa. Uberon is a core resource that supports single- and cross-species queries for candidate genes using annotations for phenotypes from the systematics, biodiversity, medical, and model organism communities, while also providing entities for logical definitions in the Cell and Gene Ontologies. The ontology release files associated with the ontology merge described in this manuscript are available at: http://purl.obolibrary.org/obo/uberon/releases/2013-02-21/ Current ontology release files are available always available at: http://purl.obolibrary.org/obo/uberon/releases/ PMID:25009735

Morphology of AGN Emission Line Regions in SDSS-IV MaNGA Survey

NASA Astrophysics Data System (ADS)

He, Zhicheng; Sun, Ai-Lei; Zakamska, Nadia L.; Wylezalek, Dominika; Kelly, Michael; Greene, Jenny E.; Rembold, Sandro B.; Riffel, Rogério; Riffel, Rogemar A.

2018-05-01

Extended narrow-line regions (NLRs) around active galactic nuclei (AGN) are shaped by the distribution of gas in the host galaxy and by the geometry of the circumnuclear obscuration, and thus they can be used to test the AGN unification model. In this work, we quantify the morphologies of the narrow-line regions in 308 nearby AGNs (z = 0 - 0.14, Lbol˜1042.4 - 44.1 erg s-1) from the MaNGA survey. Based on the narrow-line region maps, we find that a large fraction (81%) of these AGN have bi-conical NLR morphology. The distribution of their measured opening angles suggests that the intrinsic opening angles of the ionization cones has a mean value of 85-98° with a finite spread of 39-44° (1-σ). Our inferred opening angle distribution implies a number ratio of type I to type II AGN of 1:1.6-2.3, consistent with other measurements of the type I / type II ratio at low AGN luminosities. Combining these measurements with the WISE photometry data, we find that redder mid-IR color (lower effective temperature of dust) corresponds to stronger and narrower photo-ionized bicones. This relation is in agreement with the unification model that suggests that the bi-conical narrow-line regions are shaped by a toroidal dusty structure within a few pc from the AGN. Furthermore, we find a significant alignment between the minor axis of host galaxy disks and AGN ionization cones. Together, these findings suggest that obscuration on both circumnuclear (˜pc) and galactic (˜ kpc) scales are important in shaping and orienting the AGN narrow-line regions.

Cellulose digestion in primitive hexapods: Effect of ingested antibiotics on gut microbial populations and gut cellulase levels in the firebrat,Thermobia domestica (Zygentoma, Lepismatidae).

PubMed

Treves, D S; Martin, M M

1994-08-01

Antibiotic feeding studies were conducted on the firebrat,Thermobia domestica (Zygentoma, Lepismatidae) to determine if the insect's gut cellulases were of insect or microbial origin. Firebrats were fed diets containing either nystatin, metronidazole, streptomycin, tetracycline, or an antibiotic cocktail consisting of all four antibiotics, and then their gut microbial populations and gut cellulase levels were monitored and compared with the gut microbial populations and gut cellulase levels in firebrats feeding on antibiotic-free diets. Each antibiotic significantly reduced the firebrat's gut micro-flora. Nystatin reduced the firebrat's viable gut fungi by 89%. Tetracycline and the antibiotic cocktail reduced the firebrat's viable gut bacteria by 81% and 67%, respectively, and metronidazole, streptomycin, tetracycline, and the antibiotic cocktail reduced the firebrat's total gut flora by 35%, 32%, 55%, and 64%, respectively. Although antibiotics significantly reduced the firebrat's viable and total gut flora, gut cellulase levels in firebrats fed antibiotics were not significantly different from those in firebrats on an antibiotic-free diet. Furthermore, microbial populations in the firebrat's gut decreased significantly over time, even in firebrats feeding on the antibiotic-free diet, without corresponding decreases in gut cellulase levels. Based on this evidence, we conclude that the gut cellulases of firebrats are of insect origin. This conclusion implies that symbiont-independent cellulose digestion is a primitive trait in insects and that symbiont-mediated cellulose digestion is a derived condition.

Unification of quantum information theory

NASA Astrophysics Data System (ADS)

Abeyesinghe, Anura

We present the unification of many previously disparate results in noisy quantum Shannon theory and the unification of all of noiseless quantum Shannon theory. More specifically we deal here with bipartite, unidirectional, and memoryless quantum Shannon theory. We find all the optimal protocols and quantify the relationship between the resources used, both for the one-shot and for the ensemble case, for what is arguably the most fundamental task in quantum information theory: sharing entangled states between a sender and a receiver. We find that all of these protocols are derived from our one-shot superdense coding protocol and relate nicely to each other. We then move on to noisy quantum information theory and give a simple, direct proof of the "mother" protocol, or rather her generalization to the Fully Quantum Slepian-Wolf protocol (FQSW). FQSW simultaneously accomplishes two goals: quantum communication-assisted entanglement distillation, and state transfer from the sender to the receiver. As a result, in addition to her other "children," the mother protocol generates the state merging primitive of Horodecki, Oppenheim, and Winter as well as a new class of distributed compression protocols for correlated quantum sources, which are optimal for sources described by separable density operators. Moreover, the mother protocol described here is easily transformed into the so-called "father" protocol, demonstrating that the division of single-sender/single-receiver protocols into two families was unnecessary: all protocols in the family are children of the mother.

The mind–body connection in irritable bowel syndrome: A randomised controlled trial of hypnotherapy as a treatment

PubMed Central

Talley, Nicholas J; Jones, Michael P

2015-01-01

Background: Hypnotherapy has been reported as being beneficial in the treatment of irritable bowel syndrome (IBS). We aimed to test the hypothesis that patients with IBS treated ‘holistically’ by hypnosis (i.e. by combined psychological and physiological symptom imagery) would have greater improvement in their IBS symptoms than patients treated by hypnosis using standard ‘gut-directed’ hypnotherapy, and both would be superior to simple relaxation therapy. Methods: Patients (n = 51) with Rome II criteria were randomised to ‘individualised’ (holistic) hypnotherapy, standard ‘gut-directed’ hypnotherapy or relaxation therapy for a period of 11 weeks with two follow-up assessments at 2 weeks and at 3 months after the completion of the trial. The primary outcome was bowel symptom severity scale (BSSS). Results: All the participants in this study improved their IBS symptoms (pain, bloating, constipation and diarrhoea) and physical functioning at the end of the treatment from baseline, but this was not significantly different across the treatment arms. Conclusion: Neither ‘individualised’ nor ‘gut-directed’ hypnotherapy is superior to relaxation therapy in IBS. PMID:28070348

Variability in larval gut pH regulation defines sensitivity to ocean acidification in six species of the Ambulacraria superphylum.

PubMed

Hu, Marian; Tseng, Yung-Che; Su, Yi-Hsien; Lein, Etienne; Lee, Hae-Gyeong; Lee, Jay-Ron; Dupont, Sam; Stumpp, Meike

2017-10-11

The unusual rate and extent of environmental changes due to human activities may exceed the capacity of marine organisms to deal with this phenomenon. The identification of physiological systems that set the tolerance limits and their potential for phenotypic buffering in the most vulnerable ontogenetic stages become increasingly important to make large-scale projections. Here, we demonstrate that the differential sensitivity of non-calcifying Ambulacraria (echinoderms and hemichordates) larvae towards simulated ocean acidification is dictated by the physiology of their digestive systems. Gastric pH regulation upon experimental ocean acidification was compared in six species of the superphylum Ambulacraria. We observed a strong correlation between sensitivity to ocean acidification and the ability to regulate gut pH. Surprisingly, species with tightly regulated gastric pH were more sensitive to ocean acidification. This study provides evidence that strict maintenance of highly alkaline conditions in the larval gut of Ambulacraria early life stages may dictate their sensitivity to decreases in seawater pH. These findings highlight the importance of identifying and understanding pH regulatory systems in marine larval stages that may contribute to substantial energetic challenges under near-future ocean acidification scenarios. © 2017 The Author(s).

Deep-sea bacterial communities in sediments and guts of deposit-feeding holothurians in Portuguese canyons (NE Atlantic)

NASA Astrophysics Data System (ADS)

Amaro, Teresa; Witte, Harry; Herndl, Gerhard J.; Cunha, Marina R.; Billett, David S. M.

2009-10-01

Deposit-feeding holothurians often dominate the megafauna in bathyal deep-sea settings, in terms of both abundance and biomass. Molpadia musculus is particularly abundant at about 3400 m depth in the Nazaré Canyon on the NE Atlantic Continental Margin. However, these high abundances are unusual for burrowing species at this depth. The objective of this research was to understand the reasons of the massive occurrence of these molpadiid holothurians in the Nazaré Canyon. To address this question we investigated possible trophic interactions with bacteria at sites where the organic content of the sediment was different (Setúbal and Cascais Canyons, NE Atlantic Continental Margin). The molecular fingerprinting technique of Denaturing Gradient Gel Electrophoresis (DGGE) with band sequencing, combined with non-metric multi-dimensional scaling and statistical analyses, was used to compare the bacterial community diversity in canyon sediments and holothurian gut contents. Our results suggest that M. musculus does not need to develop a specialised gut bacterial community to aid digestion where the sediment is rich in organic matter (Nazaré Canyon); in contrast, such a community may be developed where the sediment is poorer in organic matter (Cascais Canyon).

Equivalence of MAXENT and Poisson point process models for species distribution modeling in ecology.

PubMed

Renner, Ian W; Warton, David I

2013-03-01

Modeling the spatial distribution of a species is a fundamental problem in ecology. A number of modeling methods have been developed, an extremely popular one being MAXENT, a maximum entropy modeling approach. In this article, we show that MAXENT is equivalent to a Poisson regression model and hence is related to a Poisson point process model, differing only in the intercept term, which is scale-dependent in MAXENT. We illustrate a number of improvements to MAXENT that follow from these relations. In particular, a point process model approach facilitates methods for choosing the appropriate spatial resolution, assessing model adequacy, and choosing the LASSO penalty parameter, all currently unavailable to MAXENT. The equivalence result represents a significant step in the unification of the species distribution modeling literature. Copyright © 2013, The International Biometric Society.

Generalized uncertainty principle and quantum gravity phenomenology

NASA Astrophysics Data System (ADS)

Bosso, Pasquale

The fundamental physical description of Nature is based on two mutually incompatible theories: Quantum Mechanics and General Relativity. Their unification in a theory of Quantum Gravity (QG) remains one of the main challenges of theoretical physics. Quantum Gravity Phenomenology (QGP) studies QG effects in low-energy systems. The basis of one such phenomenological model is the Generalized Uncertainty Principle (GUP), which is a modified Heisenberg uncertainty relation and predicts a deformed canonical commutator. In this thesis, we compute Planck-scale corrections to angular momentum eigenvalues, the hydrogen atom spectrum, the Stern-Gerlach experiment, and the Clebsch-Gordan coefficients. We then rigorously analyze the GUP-perturbed harmonic oscillator and study new coherent and squeezed states. Furthermore, we introduce a scheme for increasing the sensitivity of optomechanical experiments for testing QG effects. Finally, we suggest future projects that may potentially test QG effects in the laboratory.

Modelling atmospheric flows with adaptive moving meshes

NASA Astrophysics Data System (ADS)

Kühnlein, Christian; Smolarkiewicz, Piotr K.; Dörnbrack, Andreas

2012-04-01

An anelastic atmospheric flow solver has been developed that combines semi-implicit non-oscillatory forward-in-time numerics with a solution-adaptive mesh capability. A key feature of the solver is the unification of a mesh adaptation apparatus, based on moving mesh partial differential equations (PDEs), with the rigorous formulation of the governing anelastic PDEs in generalised time-dependent curvilinear coordinates. The solver development includes an enhancement of the flux-form multidimensional positive definite advection transport algorithm (MPDATA) - employed in the integration of the underlying anelastic PDEs - that ensures full compatibility with mass continuity under moving meshes. In addition, to satisfy the geometric conservation law (GCL) tensor identity under general moving meshes, a diagnostic approach is proposed based on the treatment of the GCL as an elliptic problem. The benefits of the solution-adaptive moving mesh technique for the simulation of multiscale atmospheric flows are demonstrated. The developed solver is verified for two idealised flow problems with distinct levels of complexity: passive scalar advection in a prescribed deformational flow, and the life cycle of a large-scale atmospheric baroclinic wave instability showing fine-scale phenomena of fronts and internal gravity waves.

The minimal SUSY B - L model: from the unification scale to the LHC

DOE PAGES

Ovrut, Burt A.; Purves, Austin; Spinner, Sogee

2015-06-26

Here, this paper introduces a random statistical scan over the high-energy initial parameter space of the minimal SUSY B - L model — denoted as the B - L MSSM. Each initial set of points is renormalization group evolved to the electroweak scale — being subjected, sequentially, to the requirement of radiative B - L and electroweak symmetry breaking, the present experimental lower bounds on the B - L vector boson and sparticle masses, as well as the lightest neutral Higgs mass of ~125 GeV. The subspace of initial parameters that satisfies all such constraints is presented, shown to bemore » robust and to contain a wide range of different configurations of soft supersymmetry breaking masses. The low-energy predictions of each such “valid” point — such as the sparticle mass spectrum and, in particular, the LSP — are computed and then statistically analyzed over the full subspace of valid points. Finally, the amount of fine-tuning required is quantified and compared to the MSSM computed using an identical random scan. The B - L MSSM is shown to generically require less fine-tuninng.« less

Gauss-Bonnet cosmology unifying late and early-time acceleration eras with intermediate eras

NASA Astrophysics Data System (ADS)

Oikonomou, V. K.

2016-07-01

In this paper we demonstrate that with vacuum F(G) gravity it is possible to describe the unification of late and early-time acceleration eras with the radiation and matter domination era. The Hubble rate of the unified evolution contains two mild singularities, so called Type IV singularities, and the evolution itself has some appealing features, such as the existence of a deceleration-acceleration transition at late times. We also address quantitatively a fundamental question related to modified gravity models description of cosmological evolution: Is it possible for all modified gravity descriptions of our Universe evolution, to produce a nearly scale invariant spectrum of primordial curvature perturbations? As we demonstrate, the answer for the F(G) description is no, since the resulting power spectrum is not scale invariant, in contrast to the F(R) description studied in the literature. Therefore, although the cosmological evolution can be realized in the context of vacuum F(G) gravity, the evolution is not compatible with the observational data, in contrast to the F(R) gravity description of the same cosmological evolution.

Making Temporal Logic Calculational: A Tool for Unification and Discovery

NASA Astrophysics Data System (ADS)

Boute, Raymond

In temporal logic, calculational proofs beyond simple cases are often seen as challenging. The situation is reversed by making temporal logic calculational, yielding shorter and clearer proofs than traditional ones, and serving as a (mental) tool for unification and discovery. A side-effect of unifying theories is easier access by practicians. The starting point is a simple generic (software tool independent) Functional Temporal Calculus (FTC). Specific temporal logics are then captured via endosemantic functions. This concept reflects tacit conventions throughout mathematics and, once identified, is general and useful. FTC also yields a reasoning style that helps discovering theorems by calculation rather than just proving given facts. This is illustrated by deriving various theorems, most related to liveness issues in TLA+, and finding strengthenings of known results. Educational issues are addressed in passing.

Comparison of proposed alternative methods for rescaling dialysis dose: resting energy expenditure, high metabolic rate organ mass, liver size, and body surface area.

PubMed

Daugirdas, John T; Levin, Nathan W; Kotanko, Peter; Depner, Thomas A; Kuhlmann, Martin K; Chertow, Glenn M; Rocco, Michael V

2008-01-01

A number of denominators for scaling the dose of dialysis have been proposed as alternatives to the urea distribution volume (V). These include resting energy expenditure (REE), mass of high metabolic rate organs (HMRO), visceral mass, and body surface area. Metabolic rate is an unlikely denominator as it varies enormously among humans with different levels of activity and correlates poorly with the glomerular filtration rate. Similarly, scaling based on HMRO may not be optimal, as many organs with high metabolic rates such as spleen, brain, and heart are unlikely to generate unusually large amounts of uremic toxins. Visceral mass, in particular the liver and gut, has potential merit as a denominator for scaling; liver size is related to protein intake and the liver, along with the gut, is known to be responsible for the generation of suspected uremic toxins. Surface area is time-honored as a scaling method for glomerular filtration rate and scales similarly to liver size. How currently recommended dialysis doses might be affected by these alternative rescaling methods was modeled by applying anthropometric equations to a large group of dialysis patients who participated in the HEMO study. The data suggested that rescaling to REE would not be much different from scaling to V. Scaling to HMRO mass would mandate substantially higher dialysis doses for smaller patients of either gender. Rescaling to liver mass would require substantially more dialysis for women compared with men at all levels of body size. Rescaling to body surface area would require more dialysis for smaller patients of either gender and also more dialysis for women of any size. Of these proposed alternative rescaling measures, body surface area may be the best, because it reflects gender-based scaling of liver size and thereby the rate of generation of uremic toxins.

Recruitment and establishment of the gut microbiome in arctic shorebirds.

PubMed

Grond, Kirsten; Lanctot, Richard B; Jumpponen, Ari; Sandercock, Brett K

2017-12-01

Gut microbiota play a key role in host health. Mammals acquire gut microbiota during birth, but timing of gut microbial recruitment in birds is unknown. We evaluated whether precocial chicks from three species of arctic-breeding shorebirds acquire gut microbiota before or after hatching, and then documented the rate and compositional dynamics of accumulation of gut microbiota. Contrary to earlier reports of microbial recruitment before hatching in chickens, quantitative PCR and Illumina sequence data indicated negligible microbiota in the guts of shorebird embryos before hatching. Analyses of chick feces indicated an exponential increase in bacterial abundance of guts 0-2 days post-hatch, followed by stabilization. Gut communities were characterized by stochastic recruitment and convergence towards a community dominated by Clostridia and Gammaproteobacteria. We conclude that guts of shorebird chicks are likely void of microbiota prior to hatch, but that stable gut microbiome establishes as early as 3 days of age, probably from environmental inocula. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Honeybee gut microbiota promotes host weight gain via bacterial metabolism and hormonal signaling

PubMed Central

Powell, J. Elijah; Steele, Margaret I.; Dietrich, Carsten; Moran, Nancy A.

2017-01-01

Social bees harbor a simple and specialized microbiota that is spatially organized into different gut compartments. Recent results on the potential involvement of bee gut communities in pathogen protection and nutritional function have drawn attention to the impact of the microbiota on bee health. However, the contributions of gut microbiota to host physiology have yet to be investigated. Here we show that the gut microbiota promotes weight gain of both whole body and the gut in individual honey bees. This effect is likely mediated by changes in host vitellogenin, insulin signaling, and gustatory response. We found that microbial metabolism markedly reduces gut pH and redox potential through the production of short-chain fatty acids and that the bacteria adjacent to the gut wall form an oxygen gradient within the intestine. The short-chain fatty acid profile contributed by dominant gut species was confirmed in vitro. Furthermore, metabolomic analyses revealed that the gut community has striking impacts on the metabolic profiles of the gut compartments and the hemolymph, suggesting that gut bacteria degrade plant polymers from pollen and that the resulting metabolites contribute to host nutrition. Our results demonstrate how microbial metabolism affects bee growth, hormonal signaling, behavior, and gut physicochemical conditions. These findings indicate that the bee gut microbiota has basic roles similar to those found in some other animals and thus provides a model in studies of host–microbe interactions. PMID:28420790

Mind-altering with the gut: Modulation of the gut-brain axis with probiotics.

PubMed

Kim, Namhee; Yun, Misun; Oh, Young Joon; Choi, Hak-Jong

2018-03-01

It is increasingly evident that bidirectional interactions exist among the gastrointestinal tract, the enteric nervous system, and the central nervous system. Recent preclinical and clinical trials have shown that gut microbiota plays an important role in these gut-brain interactions. Furthermore, alterations in gut microbiota composition may be associated with pathogenesis of various neurological disorders, including stress, autism, depression, Parkinson's disease, and Alzheimer's disease. Therefore, the concepts of the microbiota-gut-brain axis is emerging. Here, we review the role of gut microbiota in bidirectional interactions between the gut and the brain, including neural, immune-mediated, and metabolic mechanisms. We highlight recent advances in the understanding of probiotic modulation of neurological and neuropsychiatric disorders via the gut-brain axis.

Diet, gut microbiota and cognition.

PubMed

Proctor, Cicely; Thiennimitr, Parameth; Chattipakorn, Nipon; Chattipakorn, Siriporn C

2017-02-01

The consumption of a diet high in fat and sugar can lead to the development of obesity, type 2 diabetes mellitus (T2DM), cardiovascular disease and cognitive decline. In the human gut, the trillions of harmless microorganisms harboured in the host's gastrointestinal tract are called the 'gut microbiota'. Consumption of a diet high in fat and sugar changes the healthy microbiota composition which leads to an imbalanced microbial population in the gut, a phenomenon known as "gut dysbiosis". It has been shown that certain types of gut microbiota are linked to the pathogenesis of obesity. In addition, long-term consumption of a high fat diet is associated with cognitive decline. It has recently been proposed that the gut microbiota is part of a mechanistic link between the consumption of a high fat diet and the impaired cognition of an individual, termed "microbiota-gut-brain axis". In this complex relationship between the gut, the brain and the gut microbiota, there are several types of gut microbiota and host mechanisms involved. Most of these mechanisms are still poorly understood. Therefore, this review comprehensively summarizes the current evidence from mainly in vivo (rodent and human) studies of the relationship between diet, gut microbiota and cognition. The possible mechanisms that the diet and the gut microbiota have on cognition are also presented and discussed.

Interactions between a Sap Beetle, Sabal Palm, Scale Insect, Filamentous Fungi and Yeast, with Discovery of Potential Antifungal Compounds

PubMed Central

Cline, Andrew R.; Skelley, Paul E.; Kinnee, Scott A.; Rooney-Latham, Suzanne; Winterton, Shaun L.; Borkent, Christopher J.; Audisio, Paolo

2014-01-01

The multi-trophic relationship between insects, yeast, and filamentous fungi is reported on sabal palm (Sabal palmetto (Walter) Lodd. ex Schult. & Schult. f.). Gut content analyses and observations of adult and larval feeding of the sap beetle Brachypeplus glaber LeConte indicate that niche partitioning of fungal food substrata occurs between adults and larvae. This is the first report of specific mycophagous niche partitioning among beetle life stages based on gut content analyses. Fungi isolated from the beetle gut of adults, larvae, and pupae include species of Fusarium Link, Cladosporium Link, and Penicillium Link, which were differentially ingested by larvae and adults; Fusarium solani and Penicillium species in larvae, whereas F. oxysoproum, F. verticillioides, and Cladosporium in adults. These data indicate the first species-level host data for Brachypeplus Erichson species. Fusarium proliferatum (Matsush.) Nirenberg was the most commonly occurring fungal gut component, being isolated from the palm as well as gut of larvae, pupae, and adults; representing a commonly shared food resource. One species of yeast, Meyerozyma caribbica (Vaughan-Mart. et al.) Kurtzman & Suzuki (basionym = Pichia caribbica), was isolated from all life stages and is likely responsible for anti-fungal properties observed in the pupae and represents a promising source of antifungal compounds; rearing and diagnostic protocols are provided to aid biomedical researchers. Feeding and cleaning behaviors are documented using time-lapse video-micrography, and discussed in a behavioral and functional morphological context. Adults spent long periods feeding, often >1/3 of the two-hour observation period. A generic adult body posture was observed during feeding, and included substrate antennation before and after ingestion. Adult grooming behaviors were manifested in distinct antennal and tarsal cleaning mechanisms. Larval behaviors were different from adults, and larvae feeding on Fusarium fungi immediately ceased all subsequent feeding. This is the first ethogram for any adult or larval sap beetle. PMID:24586669

Anti-inflammatory effect of microbial consortia during the utilization of dietary polysaccharides.

PubMed

Thomson, Pamela; Medina, Daniel A; Ortúzar, Verónica; Gotteland, Martín; Garrido, Daniel

2018-07-01

The gut microbiome has a significant impact on host health, especially at the metabolic level. Dietary compounds arriving at the colon have a large influence on the composition of the gut microbiome. High fiber diets have been associated to health benefits that are mediated in great part by short chain fatty acids (SCFA). Gut microbial interactions are relevant for the utilization of complex carbohydrates in the gut microbiome. In this work we characterized the utilization of two dietary polysaccharides by combinations of representative adult gut microbes, and the impact of their activities on a cellular inflammation model. Paired combinations of Bifidobacterium adolescentis, Bacteroides dorei, Lactobacillus plantarum, Escherichia coli and Clostridium symbiosum were grown in inulin or xylan as carbon source. Their relative abundance, substrate consumption and major SCFAs produced were determined. Higher cell growth was observed during inulin consumption, and B. adolescentis and L. plantarum were dominant in co-cultures. The co-culture of B. dorei and C. symbiosum was dominant in xylan. In several cases the combined bacterial growth was lower in co-cultures than monocultures, with a few exceptions of synergistic growth between microorganisms. Inulin fermentation resulted in larger acetate and lactate concentrations, and several combinations grown in xylan containing C. symbiosum were characterized by high amounts of butyrate. These microbial consortia were scaled to batch bioreactor fermentations reaching high cell densities and similar profiles to co-culture experiments. Interestingly, a microbial combination producing high amounts of butyrate was able to reduce IL-8 expression in HT-29 cells co-incubated with TNFα. In summary, this work shows that microbial interactions during the utilization of dietary polysaccharides are complex and substrate dependent. Moreover, certain combinations deploy potent anti-inflammatory effects, which are independent of individual microbial growth, and could be mediated in part by higher butyrate production. Copyright © 2018 Elsevier Ltd. All rights reserved.

Anxiety, Depression, and the Microbiome: A Role for Gut Peptides.

PubMed

Lach, Gilliard; Schellekens, Harriet; Dinan, Timothy G; Cryan, John F

2018-01-01

The complex bidirectional communication between the gut and the brain is finely orchestrated by different systems, including the endocrine, immune, autonomic, and enteric nervous systems. Moreover, increasing evidence supports the role of the microbiome and microbiota-derived molecules in regulating such interactions; however, the mechanisms underpinning such effects are only beginning to be resolved. Microbiota-gut peptide interactions are poised to be of great significance in the regulation of gut-brain signaling. Given the emerging role of the gut-brain axis in a variety of brain disorders, such as anxiety and depression, it is important to understand the contribution of bidirectional interactions between peptide hormones released from the gut and intestinal bacteria in the context of this axis. Indeed, the gastrointestinal tract is the largest endocrine organ in mammals, secreting dozens of different signaling molecules, including peptides. Gut peptides in the systemic circulation can bind cognate receptors on immune cells and vagus nerve terminals thereby enabling indirect gut-brain communication. Gut peptide concentrations are not only modulated by enteric microbiota signals, but also vary according to the composition of the intestinal microbiota. In this review, we will discuss the gut microbiota as a regulator of anxiety and depression, and explore the role of gut-derived peptides as signaling molecules in microbiome-gut-brain communication. Here, we summarize the potential interactions of the microbiota with gut hormones and endocrine peptides, including neuropeptide Y, peptide YY, pancreatic polypeptide, cholecystokinin, glucagon-like peptide, corticotropin-releasing factor, oxytocin, and ghrelin in microbiome-to-brain signaling. Together, gut peptides are important regulators of microbiota-gut-brain signaling in health and stress-related psychiatric illnesses.

General bounds in Hybrid Natural Inflation

NASA Astrophysics Data System (ADS)

Germán, Gabriel; Herrera-Aguilar, Alfredo; Hidalgo, Juan Carlos; Sussman, Roberto A.; Tapia, José

2017-12-01

Recently we have studied in great detail a model of Hybrid Natural Inflation (HNI) by constructing two simple effective field theories. These two versions of the model allow inflationary energy scales as small as the electroweak scale in one of them or as large as the Grand Unification scale in the other, therefore covering the whole range of possible energy scales. In any case the inflationary sector of the model is of the form V(phi)=V0 (1+a cos(phi/f)) where 0<= a<1 and the end of inflation is triggered by an independent waterfall field. One interesting characteristic of this model is that the slow-roll parameter epsilon(phi) is a non-monotonic function of phi presenting a maximum close to the inflection point of the potential. Because the scalar spectrum Script Ps(k) of density fluctuations when written in terms of the potential is inversely proportional to epsilon(phi) we find that Script Ps(k) presents a minimum at phimin. The origin of the HNI potential can be traced to a symmetry breaking phenomenon occurring at some energy scale f which gives rise to a (massless) Goldstone boson. Non-perturbative physics at some temperature T

Gut microbiome and its role in cardiovascular diseases.

PubMed

Ahmadmehrabi, Shadi; Tang, W H Wilson

2017-11-01

In recent years, an interest in intestinal microbiota-host interactions has increased due to many findings about the impact of gut bacteria on human health and disease. Dysbiosis, a change in the composition of the gut microbiota, has been associated with much pathology, including cardiovascular diseases (CVD). This article will review normal functions of the gut microbiome, its link to CVD, and potential therapeutic interventions. The recently discovered contribution of gut microbiota-derived molecules in the development of heart disease and its risk factors has significantly increased attention towards the connection between our gut and heart. The gut microbiome is virtually an endocrine organ, arguably the largest, capable of contributing to and reacting to circulating signaling molecules within the host. Gut microbiota-host interactions occur through many pathways, including trimethylamine-N-oxide and short-chain fatty acids. These molecules and others have been linked to much pathology including chronic kidney disease, atherosclerosis, and hypertension. Although our understanding of gut microbiota-host interactions has increased recently; many questions remain about the mechanistic links between the gut microbiome and CVD. With further research, we may one day be able to add gut microbiota profiles as an assessable risk factor for CVD and target therapies towards the gut microbiota.

Gut epithelial inducible heat-shock proteins and their modulation by diet and the microbiota

PubMed Central

Arnal, Marie-Edith

2016-01-01

The epidemic of metabolic diseases has raised questions about the interplay between the human diet and the gut and its microbiota. The gut has two vital roles: nutrient absorption and intestinal barrier function. Gut barrier defects are involved in many diseases. Excess energy intake disturbs the gut microbiota and favors body entry of microbial compounds that stimulate chronic metabolic inflammation. In this context, the natural defense mechanisms of gut epithelial cells and the potential to boost them nutritionally warrant further study. One such important defense system is the activation of inducible heat-shock proteins (iHSPs) which protect the gut epithelium against oxidative stress and inflammation. Importantly, various microbial components can induce the expression of iHSPs. This review examines gut epithelial iHSPs as the main targets of microbial signals and nutrients and presents data on diseases involving disturbances of gut epithelial iHSPs. In addition, a broad literature analysis of dietary modulation of gut epithelial iHSPs is provided. Future research aims should include the identification of gut microbes that can optimize gut-protective iHSPs and the evaluation of iHSP-mediated health benefits of nutrients and food components. PMID:26883882

Black-holes-hedgehogs in the false vacuum and a new physics beyond the Standard Model

NASA Astrophysics Data System (ADS)

Das, C. R.; Laperashvili, L. V.; Sidharth, B. G.; Nielsen, H. B.

2017-12-01

In the present talk, we consider the existence of the two degenerate universal vacua: a) the first Electroweak vacuum at v = 246 GeV - “true vacuum”, and b) the second Planck scale “false vacuum” at v 2 ∼ 1018 GeV. In these vacua, we investigated the different topological defects. The main aim of this paper is an investigation of the hedgehog’s configurations as defects of the false vacuum. In the framework of the f(R) gravity, suggested by authors in their Gravi-Weak Unification model, we obtained a black hole solution, which corresponds to a “hedgehog” - global monopole, “swallowed” by a black-hole with mass ∼ 1019 GeV. These black-holes form a lattice-like structure of the vacuum at the Planck scale. Considering the results of the hedgehog lattice theory in the framework of the SU(2) Yang-Mills gauge-invariant theory with hedgehogs in the Wilson loops, we have used the critical value of temperature for the hedgehog’s confinement phase. This result gave us the possibility to conclude that there exist triplet Higgs fields which can contribute to the SM at the energy scale ≃ 104 ∼ 105 GeV. Showing a new physics at the scale 10÷100 TeV, these triplet Higgs particles can provide the stability of the EW-vacuum of the SM.

The problem of pattern and scale in ecology: what have we learned in 20 years?

PubMed

Chave, Jérôme

2013-05-01

Over the past 20 years, major advances have clarified how ecological patterns inform theory, and how in turn theory informs applied ecology. Also, there has been an increased recognition that the problem of scale at which ecological processes should be considered is critical if we are to produce general predictions. Ecological dynamics is always stochastic at small scales, but variability is conditional on the scale of description. The radical changes in the scope and aims of ecology over the past decades reflect in part the need to address pressing societal issues of environmental change. Technological advances in molecular biology, global positioning, sensing instrumentation and computational power should not be overlooked as an explanation for these radical changes. However, I argue that conceptual unification across ecology, genetics, evolution and physiology has fostered even more fertile questions. We are moving away from the view that evolution is played in a fixed ecological theatre: the theatre is being rapidly and relentlessly redesigned by the players themselves. The maintenance of ecosystem functions depends on shifts in species assemblages and on cellular metabolism, not only on flows of energy and matter. These findings have far reaching implications for our understanding of how ecosystem function and biodiversity will withstand (or not) environmental changes in the 21st century. © 2013 John Wiley & Sons Ltd/CNRS.

Renormalization group flow of the Higgs potential

NASA Astrophysics Data System (ADS)

Gies, Holger; Sondenheimer, René

2018-01-01

We summarize results for local and global properties of the effective potential for the Higgs boson obtained from the functional renormalization group, which allows one to describe the effective potential as a function of both scalar field amplitude and renormalization group scale. This sheds light onto the limitations of standard estimates which rely on the identification of the two scales and helps in clarifying the origin of a possible property of meta-stability of the Higgs potential. We demonstrate that the inclusion of higher-dimensional operators induced by an underlying theory at a high scale (GUT or Planck scale) can relax the conventional lower bound on the Higgs mass derived from the criterion of absolute stability. This article is part of the Theo Murphy meeting issue `Higgs cosmology'.

Sensations induced by medium and long chain triglycerides: role of gastric tone and hormones

PubMed Central

Barbera, R; Peracchi, M; Brighenti, F; Cesana, B; Bianchi, P; Basilisco, G

2000-01-01

BACKGROUND—The relative roles of gastric relaxation and the neuroendocrine signals released by the small intestine in the perception of nutrient induced sensations are controversial. The different effects of long chain (LCT) and medium chain (MCT) triglyceride ingestion on perception, gastric relaxation, and hormonal release may help to elucidate the mechanisms underlying nutrient induced sensations.
AIMS—To compare the effects of intraduodenal LCT and MCT infusions on perception, gastric tone, and plasma gut hormone levels in healthy subjects.
SUBJECTS—Nine fasting healthy volunteers.
METHODS—The subjects received duodenal infusions of saline followed by LCTs and MCTs in a randomised order on two different days. The sensations were rated on a visual analogue scale. Gastric tone was measured using a barostat, and plasma gut hormone levels by radioimmunoassay.
RESULTS—LCT infusion increased satiation scores, reduced gastric tone, and increased the levels of plasma cholecystokinin, gastric inhibitory polypeptide, neurotensin, and pancreatic polypeptide. MCT infusion reduced gastric tone but did not significantly affect perception or plasma gut hormone levels. LCTs produced greater gastric relaxation than MCTs.
CONCLUSIONS—The satiation induced by intraduodenal LCT infusion seems to involve changes in gastric tone and plasma gut hormone levels. The gastric relaxation induced by MCT infusion, together with the absence of any significant change in satiation scores and plasma hormone levels, suggests that, at least up to a certain level, gastric relaxation is not sufficient to induce satiation and that nutrient induced gastric relaxation may occur through cholecystokinin independent mechanisms.


Keywords: gastric tone; triglyceride; hormones; satiation; cholecystokinin; nutrients PMID:10601051

Patient satisfaction after gut-directed hypnotherapy in irritable bowel syndrome.

PubMed

Lindfors, P; Ljótsson, B; Bjornsson, E; Abrahamsson, H; Simrén, M

2013-02-01

Gut-directed hypnotherapy is an effective treatment option for irritable bowel syndrome (IBS). However, clinical observations suggest that patient satisfaction with hypnotherapy is not always associated with improvement in IBS symptoms. We evaluated 83 patients with IBS treated with gut-directed hypnotherapy (1 h week(-1), 12 weeks). After the treatment period, patients reported their satisfaction with the treatment (ranging from 1 = not at all satisfied, to 5 = very satisfied) and completed questionnaires to assess IBS symptom severity, quality of life, cognitive function, sense of coherence, depression, and anxiety before and after treatment. After hypnotherapy improved IBS symptom severity, quality of life, cognitive function, and anxiety were seen. Thirty patients (36%) were very satisfied with the treatment and 57 (69%) patients scored 4 or 5 on the patient satisfaction scale. Patient satisfaction was associated with less severe IBS symptoms and better quality of life after the treatment. In a multiple linear regression analysis, only the quality of life domain sexual relations was independently associated with patient satisfaction after hypnotherapy, explaining 22% of the variance. Using 25% reduction of IBS symptom severity to define an IBS symptom responder, 52% of the responders were very satisfied with hypnotherapy, but this was also true for 31% in the non-responder group. Patient satisfaction with gut-directed hypnotherapy in IBS is associated with improvement of quality of life and gastrointestinal (GI) symptoms. However, other factors unrelated to GI symptoms also seems to be of importance for patient satisfaction, as a substantial proportion of patients without GI symptom improvement were also very satisfied with this treatment option. © 2012 Blackwell Publishing Ltd.

Compartmentalized microbial composition, oxygen gradients and nitrogen fixation in the gut of Odontotaenius disjunctus.

PubMed

Ceja-Navarro, Javier A; Nguyen, Nhu H; Karaoz, Ulas; Gross, Stephanie R; Herman, Donald J; Andersen, Gary L; Bruns, Thomas D; Pett-Ridge, Jennifer; Blackwell, Meredith; Brodie, Eoin L

2014-01-01

Coarse woody debris is an important biomass pool in forest ecosystems that numerous groups of insects have evolved to take advantage of. These insects are ecologically important and represent useful natural analogs for biomass to biofuel conversion. Using a range of molecular approaches combined with microelectrode measurements of oxygen, we have characterized the gut microbiome and physiology of Odontotaenius disjunctus, a wood-feeding beetle native to the eastern United States. We hypothesized that morphological and physiological differences among gut regions would correspond to distinct microbial populations and activities. In fact, significantly different communities were found in the foregut (FG), midgut (MG)/posterior hindgut (PHG) and anterior hindgut (AHG), with Actinobacteria and Rhizobiales being more abundant toward the FG and PHG. Conversely, fermentative bacteria such as Bacteroidetes and Clostridia were more abundant in the AHG, and also the sole region where methanogenic Archaea were detected. Although each gut region possessed an anaerobic core, micron-scale profiling identified radial gradients in oxygen concentration in all regions. Nitrogen fixation was confirmed by (15)N2 incorporation, and nitrogenase gene (nifH) expression was greatest in the AHG. Phylogenetic analysis of nifH identified the most abundant transcript as related to Ni-Fe nitrogenase of a Bacteroidetes species, Paludibacter propionicigenes. Overall, we demonstrate not only a compartmentalized microbiome in this beetle digestive tract but also sharp oxygen gradients that may permit aerobic and anaerobic metabolism to occur within the same regions in close proximity. We provide evidence for the microbial fixation of N2 that is important for this beetle to subsist on woody biomass.

Review article: the gut microbiome in inflammatory bowel disease-avenues for microbial management.

PubMed

McIlroy, J; Ianiro, G; Mukhopadhya, I; Hansen, R; Hold, G L

2018-01-01

The concept of an altered collective gut microbiota rather than identification of a single culprit is possibly the most significant development in inflammatory bowel disease research. We have entered the "omics" era, which now allows us to undertake large-scale/high-throughput microbiota analysis which may well define how we approach diagnosis and treatment of inflammatory bowel disease (IBD) in the future, with a strong steer towards personalised therapeutics. To assess current epidemiological, experimental and clinical evidence of the current status of knowledge relating to the gut microbiome, and its role in IBD, with emphasis on reviewing the evidence relating to microbial therapeutics and future microbiome modulating therapeutics. A Medline search including items 'intestinal microbiota/microbiome', 'inflammatory bowel disease', 'ulcerative colitis', 'Crohn's disease', 'faecal microbial transplantation', 'dietary manipulation' was performed. Disease remission and relapse are associated with microbial changes in both mucosal and luminal samples. In particular, a loss of species richness in Crohn's disease has been widely observed. Existing therapeutic approaches broadly fall into 3 categories, namely: accession, reduction or indirect modulation of the microbiome. In terms of microbial therapeutics, faecal microbial transplantation appears to hold the most promise; however, differences in study design/methodology mean it is currently challenging to elegantly translate results into clinical practice. Existing approaches to modulate the gut microbiome are relatively unrefined. Looking forward, the future of microbiome-modulating therapeutics looks bright with several novel strategies/technologies on the horizon. Taken collectively, it is clear that ignoring the microbiome in IBD is not an option. © 2017 John Wiley & Sons Ltd.

Microbiota-gut-brain axis and the central nervous system.

PubMed

Zhu, Xiqun; Han, Yong; Du, Jing; Liu, Renzhong; Jin, Ketao; Yi, Wei

2017-08-08

The gut and brain form the gut-brain axis through bidirectional nervous, endocrine, and immune communications. Changes in one of the organs will affect the other organs. Disorders in the composition and quantity of gut microorganisms can affect both the enteric nervous system and the central nervous system (CNS), thereby indicating the existence of a microbiota-gut-brain axis. Due to the intricate interactions between the gut and the brain, gut symbiotic microorganisms are closely associated with various CNS diseases, such as Parkinson's disease, Alzheimer's disease, schizophrenia, and multiple sclerosis. In this paper, we will review the latest advances of studies on the correlation between gut microorganisms and CNS functions & diseases.

The gut microbiota and its relationship to diet and obesity

PubMed Central

Clarke, Siobhan F.; Murphy, Eileen F.; Nilaweera, Kanishka; Ross, Paul R.; Shanahan, Fergus; O’Toole, Paul W.; Cotter, Paul D.

2012-01-01

Obesity develops from a prolonged imbalance of energy intake and energy expenditure. However, the relatively recent discovery that the composition and function of the gut microbiota impacts on obesity has lead to an explosion of interest in what is now a distinct research field. Here, research relating to the links between the gut microbiota, diet and obesity will be reviewed under five major headings: (1) the gut microbiota of lean and obese animals, (2) the composition of the gut microbiota of lean and obese humans, (3) the impact of diet on the gut microbiota, (4) manipulating the gut microbiota and (5) the mechanisms by which the gut microbiota can impact on weight gain. PMID:22572830

The Expensive-Tissue Hypothesis in Vertebrates: Gut Microbiota Effect, a Review.

PubMed

Huang, Chun Hua; Yu, Xin; Liao, Wen Bo

2018-06-17

The gut microbiota is integral to an organism’s digestive structure and has been shown to play an important role in producing substrates for gluconeogenesis and energy production, vasodilator, and gut motility. Numerous studies have demonstrated that variation in diet types is associated with the abundance and diversity of the gut microbiota, a relationship that plays a significant role in nutrient absorption and affects gut size. The Expensive-Tissue Hypothesis states (ETH) that the metabolic requirement of relatively large brains is offset by a corresponding reduction of the other tissues, such as gut size. However, how the trade-off between gut size and brain size in vertebrates is associated with the gut microbiota through metabolic requirements still remains unexplored. Here, we review research relating to and discuss the potential influence of gut microbiota on the ETH.

The impact of rearing environment on the development of gut microbiota in tilapia larvae

PubMed Central

Giatsis, Christos; Sipkema, Detmer; Smidt, Hauke; Heilig, Hans; Benvenuti, Giulia; Verreth, Johan; Verdegem, Marc

2015-01-01

This study explores the effect of rearing environment on water bacterial communities (BC) and the association with those present in the gut of Nile tilapia larvae (Oreochromis niloticus, Linnaeus) grown in either recirculating or active suspension systems. 454 pyrosequencing of PCR-amplified 16S rRNA gene fragments was applied to characterize the composition of water, feed and gut bacteria communities. Observed changes in water BC over time and differences in water BCs between systems were highly correlated with corresponding water physico-chemical properties. Differences in gut bacterial communities during larval development were correlated with differences in water communities between systems. The correlation of feed BC with those in the gut was minor compared to that between gut and water, reflected by the fact that 4 to 43 times more OTUs were shared between water and gut than between gut and feed BC. Shared OTUs between water and gut suggest a successful transfer of microorganisms from water into the gut, and give insight about the niche and ecological adaptability of water microorganisms inside the gut. These findings suggest that steering of gut microbial communities could be possible through water microbial management derived by the design and functionality of the rearing system. PMID:26658351

Supergroup.

ERIC Educational Resources Information Center

Thomsen, Dietrick E.

1979-01-01

Supersymmetry is a newly developed principle with which theorists are attempting to continue the work of unification. This article examines the principle of supersymmetry at the subatomic level and relates it to the quest for a unity theory. (MA)

Structure of Manila Clam (Ruditapes philippinarum) Microbiota at the Organ Scale in Contrasting Sets of Individuals.

PubMed

Meisterhans, Guillaume; Raymond, Natalie; Girault, Emilie; Lambert, Christophe; Bourrasseau, Line; de Montaudouin, Xavier; Garabetian, Frédéric; Jude-Lemeilleur, Florence

2016-01-01

Marine invertebrate microbiota has a key function in host physiology and health. To date, knowledge about bivalve microbiota is poorly documented except public health concerns. This study used a molecular approach to characterize the microbiota associated with the bivalve Manila clam (Ruditapes philippinarum) by determining (1) the difference among organs either or not under the influence of host habitat, (2) small-scale variability of microbiota, and (3) the experimental response of the Manila clam microbiota submitted to different lateral transmissions. These questions were investigated by sampling two groups of individuals living in contrasting habitats and carrying out a transplant experiment. Manila clam microbiota (i.e., bacterial community structure) was determined at organ-scale (gills, gut, and a pool of remaining tissues) by capillary electrophoresis DNA fingerprinting (CE fingerprinting). The Manila clam microbiota structure differed among organs indicating a selection of Manila clam microbiota at organ scale. Habitat strongly influenced gill and gut microbiota. In contrast, microbiota associated with remaining tissues was similar between group individuals suggesting that these communities are mostly autochthonous, i.e., Manila clam specific. Transplant experiment showed that improving living condition did not induce any change in microbiota associated with remaining tissues. In contrast, the reduction in individual habitat quality led to individuals in declining health as strongly suggested by the increase in phagocytosis activity and decrease in condition index together with the change in internal organ microbiota. This study provides a first description of the Manila clam holobiont which can withstand disturbance and respond opportunistically to improved environmental conditions.

Unification with vector-like fermions and signals at LHC

NASA Astrophysics Data System (ADS)

Bhattacherjee, Biplob; Byakti, Pritibhajan; Kushwaha, Ashwani; Vempati, Sudhir K.

2018-05-01

We look for minimal extensions of Standard Model with vector like fermions leading to precision unification of gauge couplings. Constraints from proton decay, Higgs stability and perturbativity are considered. The simplest models contain several copies of vector fermions in two different (incomplete) representations. Some of these models encompass Type III seesaw mechanism for neutrino masses whereas some others have a dark matter candidate. In all the models, at least one of the candidates has non-trivial representation under SU(3)color. In the limit of vanishing Yukawa couplings, new QCD bound states are formed, which can be probed at LHC. The present limits based on results from 13 TeV already probe these particles for masses around a TeV. Similar models can be constructed with three or four vector representations, examples of which are presented.

Requirements for energy based constitutive modeling in tire mechanics

NASA Technical Reports Server (NTRS)

Luchini, John R.; Peters, Jim M.; Mars, Will V.

1995-01-01

The history, requirements, and theoretical basis of a new energy based constitutive model for (rubber) material elasticity, hysteresis, and failure are presented. Energy based elasticity is handled by many constitutive models, both in one dimension and in three dimensions. Conversion of mechanical energy to heat can be modeled with viscoelasticity or as structural hysteresis. We are seeking unification of elasticity, hysteresis, and failure mechanisms such as fatigue and wear. An energy state characterization for failure criteria of (rubber) materials may provide this unification and also help explain the interaction of temperature effects with failure mechanisms which are described as creation of growth of internal crack surface. Improved structural modeling of tires with FEM should result from such a unified constitutive theory. The theory will also guide experimental work and should enable better interpretation of the results of computational stress analyses.

Why do larval helminths avoid the gut of intermediate hosts?

PubMed

Parker, G A; Ball, M A; Chubb, J C

2009-10-07

In complex life cycles, larval helminths typically migrate from the gut to exploit the tissues of their intermediate hosts. Yet the definitive host's gut is overwhelmingly the most favoured site for adult helminths to release eggs. Vertebrate nematodes with one-host cycles commonly migrate to a site in the host away from the gut before returning to the gut for reproduction; those with complex cycles occupy sites exclusively in the intermediate host's tissues or body spaces, and may or may not show tissue migration before (typically) returning to the gut in the definitive host. We develop models to explain the patterns of exploitation of different host sites, and in particular why larval helminths avoid the intermediate host's gut, and adult helminths favour it. Our models include the survival costs of migration between sites, and maximise fitness (=expected lifetime number of eggs produced by a given helminth propagule) in seeking the optimal strategy (host gut versus host tissue exploitation) under different growth, mortality, transmission and reproductive rates in the gut and tissues (i.e. sites away from the gut). We consider the relative merits of the gut and tissues, and conclude that (i) growth rates are likely to be higher in the tissues, (ii) mortality rates possibly higher in the gut (despite the immunological inertness of the gut lumen), and (iii) that there are very high benefits to egg release in the gut. The models show that these growth and mortality relativities would account for the common life history pattern of avoidance of the intermediate host's gut because the tissues offer a higher growth rate/mortality rate ratio (discounted by the costs of migration), and make a number of testable predictions. Though nematode larvae in paratenic hosts usually migrate to the tissues, unlike larvae in intermediates, they sometimes remain in the gut, which is predicted since in paratenics mortality rate and migration costs alone determine the site to be exploited.

Computational Unification: a Vision for Connecting Researchers

NASA Astrophysics Data System (ADS)

Troy, R. M.; Kingrey, O. J.

2002-12-01

Computational Unification of science, once only a vision, is becoming a reality. This technology is based upon a scientifically defensible, general solution for Earth Science data management and processing. The computational unification of science offers a real opportunity to foster inter and intra-discipline cooperation, and the end of 're-inventing the wheel'. As we move forward using computers as tools, it is past time to move from computationally isolating, "one-off" or discipline-specific solutions into a unified framework where research can be more easily shared, especially with researchers in other disciplines. The author will discuss how distributed meta-data, distributed processing and distributed data objects are structured to constitute a working interdisciplinary system, including how these resources lead to scientific defensibility through known lineage of all data products. Illustration of how scientific processes are encapsulated and executed illuminates how previously written processes and functions are integrated into the system efficiently and with minimal effort. Meta-data basics will illustrate how intricate relationships may easily be represented and used to good advantage. Retrieval techniques will be discussed including trade-offs of using meta-data versus embedded data, how the two may be integrated, and how simplifying assumptions may or may not help. This system is based upon the experience of the Sequoia 2000 and BigSur research projects at the University of California, Berkeley, whose goals were to find an alternative to the Hughes EOS-DIS system and is presently offered by Science Tools corporation, of which the author is a principal.

Lie-Santilli isoapproach to the unification of gravity and electromagnetism

DOE Office of Scientific and Technical Information (OSTI.GOV)

Animalu, A.O.E.

1996-06-01

The author reviews the problem of Einstein`s original proposal for the unification of gravity and electromagnetism in space-time differential geometry along the lines of the recent contributions by A.A. Logunov, R.M. Santilli, D.F. Lopez and others. The author presents a new method of unification based on the Lie-Santilli isotopic theory whereby the unified field tensor g = (g{sub {mu}{nu}}) is constructed from the symmetric Riemannian gravitational tensor, g = (g{mu}{nu}), and the antisymmetric electromagnetic field tensor F = (F{sub {mu}{nu}}) via an isotopic lifting g {yields} {cflx g} = Fg of the type of Lax pairing, where det F {ne}more » 0, the unified field {cflx g} satisfies Logunov-Santilli equations while g and F are treated as Lax pair. Because of Santilli`s isotopic equivalence between Minkowskian and Riemannian geometries, the author infers that in the Minkowskian limit F = f, g = {eta}, the metric {eta} satisfies Lax`s equation of motion {partial_derivative}{eta}/{partial_derivative}t = f{eta} {minus} {eta}f which insures the conservation of the eigenvalues of g. The invariance of the electromagnetic group of transformations (F) in Minkowski space is determined by the eigenvalue equations, det (F{sub {mu}{nu}}){minus}{lambda}{eta}{sub {mu}{nu}} = 0, from which the author deduces a Lie-isotopic {open_quotes}extended{close_quotes} relativity principle. A wave equation for a spin-2 particle in the unified field is derived, and the experimental consequences of the theory are discussed.« less

Impact of dietary fibers on nutrient management and detoxification organs: Gut, liver, and kidneys

USDA-ARS?s Scientific Manuscript database

Increased dietary fiber (DF) intake elicits a wide range of physiological effects, not just locally in the gut, but systemically. Dietary fibers can greatly alter the gut milieu by impacting the gut microbiome, which in turn influences the gut barrier, gastrointestinal immune and endocrine response...

The role of gut peptides in the gut-brain-axis of livestock

USDA-ARS?s Scientific Manuscript database

Gut peptides are small hormones produced within the gut that are involved in many biological processes including, but not limited to, appetite regulation, mucosal growth, and metabolism regulation. Some peptides, such as cholecystokinin (CCK) and xenin-25 may affect appetite by altering gut motilit...

Innate immunity and gut-microbe mutualism in Drosophila.

PubMed

Ryu, Ji-Hwan; Ha, Eun-Mi; Lee, Won-Jae

2010-04-01

Metazoan guts face a wide variety of microorganisms upon exposure to the environment, including beneficial symbionts, non-symbionts, food-borne microbes and life-threatening pathogens. Recent evidence has shown that the innate immunity of gut epithelia, such as anti-microbial peptide- and reactive oxygen species-based immune systems, actively participate in gut-microbe homeostasis by shaping the commensal community while efficiently eliminating unwanted bacteria. Therefore, elucidation of the regulatory mechanism by which gut innate immunity occurs at the molecular level will provide a novel perspective of gut-microbe mutualisms as well as of gut diseases caused by alterations in the innate immunity.

Mechanisms of inflammation-driven bacterial dysbiosis in the gut

PubMed Central

Zeng, MY; Inohara, N; Nuñez, G

2018-01-01

The gut microbiota has diverse and essential roles in host metabolism, development of the immune system and as resistance to pathogen colonization. Perturbations of the gut microbiota, termed gut dysbiosis, are commonly observed in diseases involving inflammation in the gut, including inflammatory bowel disease, infection, colorectal cancer and food allergies. Importantly, the inflamed microenvironment in the gut is particularly conducive to blooms of Enterobacteriaceae, which acquire fitness benefits while other families of symbiotic bacteria succumb to environmental changes inflicted by inflammation. Here we summarize studies that examined factors in the inflamed gut that contribute to blooms of Enterobacterieaceae, and highlight potential approaches to restrict Enterobacterial blooms in treating diseases that are otherwise complicated by overgrowth of virulent Enterobacterial species in the gut. PMID:27554295

Ménage à trois in the human gut: interactions between host, bacteria and phages.

PubMed

Mirzaei, Mohammadali Khan; Maurice, Corinne F

2017-07-01

The human gut is host to one of the densest microbial communities known, the gut microbiota, which contains bacteria, archaea, viruses, fungi and other microbial eukaryotes. Bacteriophages in the gut are largely unexplored, despite their potential to regulate bacterial communities and thus human health. In addition to helping us understand gut homeostasis, applying an ecological perspective to the study of bacterial and phage communities in the gut will help us to understand how this microbial system functions. For example, temporal studies of bacteria, phages and host immune cells in the gut during health and disease could provide key information about disease development and inform therapeutic treatments, whereas understanding the regulation of the replication cycles of phages could help harness the gut microbiota to improve disease outcomes. As the most abundant biological entities in our gut, we must consider bacteriophages in our pursuit of personalized medicine.

The influence of gut microbiota on drug metabolism and toxicity

PubMed Central

Li, Houkai; He, Jiaojiao; Jia, Wei

2017-01-01

Introduction Gut microbiota plays critical roles in drug metabolism. The individual variation of gut microbiota contributes to the interindividual differences towards drug therapy including drug-induced toxicity and efficacy. Accordingly, the investigation and elucidation of gut microbial impacts on drug metabolism and toxicity will not only facilitate the way of personalized medicine, but also improve the rational drug design. Areas covered This review provide an overview on the microbiota-host cometabolism on drug metabolism and summarize 30 clinical drugs which are co-metabolized by host and gut microbiota. Moreover, this review is specifically focused on elucidating the gut microbial modulation on some clinical drugs, in which the gut microbial influences on drug metabolism, drug-induced toxicity and efficacy are intensively discussed. Expert opinion The gut microbial contribution to drug metabolism and toxicity is increasingly recognized, but remains largely unexplored due to the extremely complex relationship between gut microbiota and host. The mechanistic elucidation of gut microbiota in drug metabolism is critical before any practical progress in drug design or personalized medicine could be made by modulating human gut microbiota, which is predominantly relied on the technical innovations such as metagenomics and metabolomics, as well as the integration of multi-disciplinary knowledge. PMID:26569070

The human gut resistome.

PubMed

van Schaik, Willem

2015-06-05

In recent decades, the emergence and spread of antibiotic resistance among bacterial pathogens has become a major threat to public health. Bacteria can acquire antibiotic resistance genes by the mobilization and transfer of resistance genes from a donor strain. The human gut contains a densely populated microbial ecosystem, termed the gut microbiota, which offers ample opportunities for the horizontal transfer of genetic material, including antibiotic resistance genes. Recent technological advances allow microbiota-wide studies into the diversity and dynamics of the antibiotic resistance genes that are harboured by the gut microbiota ('the gut resistome'). Genes conferring resistance to antibiotics are ubiquitously present among the gut microbiota of humans and most resistance genes are harboured by strictly anaerobic gut commensals. The horizontal transfer of genetic material, including antibiotic resistance genes, through conjugation and transduction is a frequent event in the gut microbiota, but mostly involves non-pathogenic gut commensals as these dominate the microbiota of healthy individuals. Resistance gene transfer from commensals to gut-dwelling opportunistic pathogens appears to be a relatively rare event but may contribute to the emergence of multi-drug resistant strains, as is illustrated by the vancomycin resistance determinants that are shared by anaerobic gut commensals and the nosocomial pathogen Enterococcus faecium.

The human gut resistome

PubMed Central

van Schaik, Willem

2015-01-01

In recent decades, the emergence and spread of antibiotic resistance among bacterial pathogens has become a major threat to public health. Bacteria can acquire antibiotic resistance genes by the mobilization and transfer of resistance genes from a donor strain. The human gut contains a densely populated microbial ecosystem, termed the gut microbiota, which offers ample opportunities for the horizontal transfer of genetic material, including antibiotic resistance genes. Recent technological advances allow microbiota-wide studies into the diversity and dynamics of the antibiotic resistance genes that are harboured by the gut microbiota (‘the gut resistome’). Genes conferring resistance to antibiotics are ubiquitously present among the gut microbiota of humans and most resistance genes are harboured by strictly anaerobic gut commensals. The horizontal transfer of genetic material, including antibiotic resistance genes, through conjugation and transduction is a frequent event in the gut microbiota, but mostly involves non-pathogenic gut commensals as these dominate the microbiota of healthy individuals. Resistance gene transfer from commensals to gut-dwelling opportunistic pathogens appears to be a relatively rare event but may contribute to the emergence of multi-drug resistant strains, as is illustrated by the vancomycin resistance determinants that are shared by anaerobic gut commensals and the nosocomial pathogen Enterococcus faecium. PMID:25918444

The gut microenvironment of sediment-dwelling Chironomus plumosus larvae as characterised with O2, pH, and redox microsensors.

PubMed

Stief, Peter; Eller, Gundula

2006-09-01

We devised a set-up in which microsensors can be used for characterising the gut microenvironment of aquatic macrofauna. In a small flow cell, we measured microscale gradients through dissected guts (O(2), pH, redox potential [E ( h )]), in the haemolymph (O(2)), and towards the body surface (O(2)) of Chironomus plumosus larvae. The gut microenvironment was compared with the chemical conditions in the lake sediment in which the animals reside and feed. When the dissected guts were incubated at the same nominal O(2) concentration as in haemolymph, the gut content was completely anoxic and had pH and E ( h ) values slightly lower than in the ambient sediment. When the dissected guts were artificially oxygenated, the volumetric O(2)-consumption rates of the gut content were at least 10x higher than in the sediment. Using these potential O(2)-consumption rates in a cylindrical diffusion-reaction model, it was predicted that diffusion of O(2) from the haemolymph to the gut could not oxygenate the gut content under in vivo conditions. Additionally, the potential O(2)-consumption rates were so high that the intake of dissolved O(2) along with feeding could be ruled out to oxygenate the gut content. We conclude that microorganisms present in the gut of C. plumosus cannot exhibit an aerobic metabolism. The presented microsensor technique and the data analysis are applicable to guts of other macrofauna species with cutaneous respiration.

THE SUZAKU VIEW OF THE DISK-JET CONNECTION IN THE LOW-EXCITATION RADIO GALAXY NGC 6251

DOE Office of Scientific and Technical Information (OSTI.GOV)

Evans, D. A.; Kraft, R. P.; Lee, J. C.

We present results from an 87 ks Suzaku observation of the canonical low-excitation radio galaxy (LERG) NGC 6251. We have previously suggested that LERGs violate conventional active galactic nucleus unification schemes: they may lack an obscuring torus and are likely to accrete in a radiatively inefficient manner, with almost all of the energy released by the accretion process being channeled into powerful jets. We model the 0.5-20 keV Suzaku spectrum with a single power law of photon index {Gamma} = 1.82{sup +0.04} {sub -0.05}, together with two collisionally ionized plasma models whose parameters are consistent with the known galaxy- andmore » group-scale thermal emission. Our observations confirm that there are no signatures of obscured, accretion-related X-ray emission in NGC 6251, and we show that the luminosity of any such component must be substantially sub-Eddington in nature.« less

Unification and new particles at the LHC

DOE Office of Scientific and Technical Information (OSTI.GOV)

Arkani-Hamed, Nima; D’Agnolo, Raffaele Tito; Low, Matthew

Precision gauge coupling uni cation is one of the primary quantitative successes of low energy or split supersymmetry. Preserving this success puts severe restrictions on possible matter and gauge sectors that might appear at collider-accessible energies. In this study we enumerate new gauge sectors which are compatible with uni cation, consisting of horizontal gauge groups acting on vector-like matter charged under the Standard Model. Interestingly, almost all of these theories are in the supersymmetric conformal window at high energies and con ne quickly after the superpartners are decoupled. For a range of scalar masses compatible with both moderately tuned andmore » minimally split supersymmetry, the con ning dynamics happen at the multi-TeV scale, leading to a spectrum of multiple spin-0 and spin-1 resonances accessible to the LHC, with unusual quantum numbers and striking decay patterns.« less

Class of Exact Solutions for a Cosmological Model of Unified Gravitational and Quintessence Fields

NASA Astrophysics Data System (ADS)

Asenjo, Felipe A.; Hojman, Sergio A.

2017-07-01

A new approach to tackle Einstein equations for an isotropic and homogeneous Friedmann-Robertson-Walker Universe in the presence of a quintessence scalar field is devised. It provides a way to get a simple exact solution to these equations. This solution determines the quintessence potential uniquely and it differs from solutions which have been used to study inflation previously. It relays on a unification of geometry and dark matter implemented through the definition of a functional relation between the scale factor of the Universe and the quintessence field. For a positive curvature Universe, this solution produces perpetual accelerated expansion rate of the Universe, while the Hubble parameter increases abruptly, attains a maximum value and decreases thereafter. The behavior of this cosmological solution is discussed and its main features are displayed. The formalism is extended to include matter and radiation.

Unification and new particles at the LHC

DOE PAGES

Arkani-Hamed, Nima; D’Agnolo, Raffaele Tito; Low, Matthew; ...

2016-11-14

Precision gauge coupling uni cation is one of the primary quantitative successes of low energy or split supersymmetry. Preserving this success puts severe restrictions on possible matter and gauge sectors that might appear at collider-accessible energies. In this study we enumerate new gauge sectors which are compatible with uni cation, consisting of horizontal gauge groups acting on vector-like matter charged under the Standard Model. Interestingly, almost all of these theories are in the supersymmetric conformal window at high energies and con ne quickly after the superpartners are decoupled. For a range of scalar masses compatible with both moderately tuned andmore » minimally split supersymmetry, the con ning dynamics happen at the multi-TeV scale, leading to a spectrum of multiple spin-0 and spin-1 resonances accessible to the LHC, with unusual quantum numbers and striking decay patterns.« less

Probing the stability of superheavy dark matter particles with high-energy neutrinos

DOE Office of Scientific and Technical Information (OSTI.GOV)

Esmaili, Arman; Peres, Orlando L.G.; Ibarra, Alejandro, E-mail: aesmaili@ifi.unicamp.br, E-mail: ibarra@tum.de, E-mail: orlando@ifi.unicamp.br

2012-11-01

Two of the most fundamental properties of the dark matter particle, the mass and the lifetime, are only weakly constrained by the astronomical and cosmological evidence of dark matter. We derive in this paper lower limits on the lifetime of dark matter particles with masses in the range 10TeV−10{sup 15}TeV from the non-observation of ultrahigh energy neutrinos in the AMANDA, IceCube, Auger and ANITA experiments. For dark matter particles which produce neutrinos in a two body or a three body leptonic decay, we find that the dark matter lifetime must be longer than O(10{sup 26}−10{sup 28})s for masses between 10more » TeV and the Grand Unification scale. Finally, we also calculate, for concrete particle physics scenarios, the limits on the strength of the interactions that induce the dark matter decay.« less

Likelihood analysis of supersymmetric SU(5) GUTs

DOE PAGES

Bagnaschi, Emanuele; Costa, J. C.; Sakurai, K.; ...

2017-02-16

Here, we perform a likelihood analysis of the constraints from accelerator experiments and astrophysical observations on supersymmetric (SUSY) models with SU(5) boundary conditions on soft SUSY-breaking parameters at the GUT scale. The parameter space of the models studied has 7 parameters: a universal gaugino massmore » $$m_{1/2}$$, distinct masses for the scalar partners of matter fermions in five- and ten-dimensional representations of SU(5), $$m_5$$ and $$m_{10}$$, and for the $$\\mathbf{5}$$ and $$\\mathbf{\\bar 5}$$ Higgs representations $$m_{H_u}$$ and $$m_{H_d}$$, a universal trilinear soft SUSY-breaking parameter $$A_0$$, and the ratio of Higgs vevs $$\\tan \\beta$$. In addition to previous constraints from direct sparticle searches, low-energy and flavour observables, we incorporate constraints based on preliminary results from 13 TeV LHC searches for jets + MET events and long-lived particles, as well as the latest PandaX-II and LUX searches for direct Dark Matter detection. In addition to previously-identified mechanisms for bringing the supersymmetric relic density into the range allowed by cosmology, we identify a novel $${\\tilde u_R}/{\\tilde c_R} - \\tilde{\\chi}^0_1$$ coannihilation mechanism that appears in the supersymmetric SU(5) GUT model and discuss the role of $${\\tilde \

Multi-Omics Analysis Reveals a Correlation between the Host Phylogeny, Gut Microbiota and Metabolite Profiles in Cyprinid Fishes

PubMed Central

Li, Tongtong; Long, Meng; Li, Huan; Gatesoupe, François-Joël; Zhang, Xujie; Zhang, Qianqian; Feng, Dongyue; Li, Aihua

2017-01-01

Gut microbiota play key roles in host nutrition and metabolism. However, little is known about the relationship between host genetics, gut microbiota and metabolic profiles. Here, we used high-throughput sequencing and gas chromatography/mass spectrometry approaches to characterize the microbiota composition and the metabolite profiles in the gut of five cyprinid fish species with three different feeding habits raised under identical husbandry conditions. Our results showed that host species and feeding habits significantly affect not only gut microbiota composition but also metabolite profiles (ANOSIM, p ≤ 0.05). Mantel test demonstrated that host phylogeny, gut microbiota, and metabolite profiles were significantly related to each other (p ≤ 0.05). Additionally, the carps with the same feeding habits had more similarity in gut microbiota composition and metabolite profiles. Various metabolites were correlated positively with bacterial taxa involved in food degradation. Our results shed new light on the microbiome and metabolite profiles in the gut content of cyprinid fishes, and highlighted the correlations between host genotype, fish gut microbiome and putative functions, and gut metabolite profiles. PMID:28367147

Brain Gut Microbiome Interactions and Functional Bowel Disorders

PubMed Central

Mayer, Emeran A.; Savidge, Tor; Shulman, Robert J.

2014-01-01

Alterations in the bidirectional interactions between the gut and the nervous system play an important role in IBS pathophysiology and symptom generation. A body of largely preclinical evidence suggests that the gut microbiota can modulate these interactions. Characterizations of alterations of gut microbiota in unselected IBS patients, and assessment of changes in subjective symptoms associated with manipulations of the gut microbiota with prebiotics, probiotics and antibiotics support a small, but poorly defined role of dybiosis in overall IBS symptoms. It remains to be determined if the observed abnormalities are a consequence of altered top down signaling from the brain to the gut and microbiota, if they are secondary to a primary perturbation of the microbiota, and if they play a role in the development of altered brain gut interactions early in life. Different mechanisms may play role in subsets of patients. Characterization of gut microbiome alterations in large cohorts of well phenotyped patients as well as evidence correlating gut metabolites with specific abnormalities in the gut brain axis are required to answer these questions. PMID:24583088

A review of metabolic potential of human gut microbiome in human nutrition.

PubMed

Yadav, Monika; Verma, Manoj Kumar; Chauhan, Nar Singh

2018-03-01

The human gut contains a plethora of microbes, providing a platform for metabolic interaction between the host and microbiota. Metabolites produced by the gut microbiota act as a link between gut microbiota and its host. These metabolites act as messengers having the capacity to alter the gut microbiota. Recent advances in the characterization of the gut microbiota and its symbiotic relationship with the host have provided a platform to decode metabolic interactions. The human gut microbiota, a crucial component for dietary metabolism, is shaped by the genetic, epigenetic and dietary factors. The metabolic potential of gut microbiota explains its significance in host health and diseases. The knowledge of interactions between microbiota and host metabolism, as well as modification of microbial ecology, is really beneficial to have effective therapeutic treatments for many diet-related diseases in near future. This review cumulates the information to map the role of human gut microbiota in dietary component metabolism, the role of gut microbes derived metabolites in human health and host-microbe metabolic interactions in health and diseases.

Supergravity and the Unification of the Laws of Physics

ERIC Educational Resources Information Center

Freedman, Daniel Z.; van Nieuwenhuizen, Peter

1978-01-01

In this new theory the gravitational force arises from a symmetry relating particles with vastly different properties. The ultimate result may be a unified theory of all the basic forces in nature. (Author/BB)

The Search for Proton Decay.

ERIC Educational Resources Information Center

Marshak, Marvin L.

1984-01-01

Provides the rationale for and examples of experiments designed to test the stability of protons and bound neutrons. Also considers the unification question, cosmological implications, current and future detectors, and current status of knowledge on proton decay. (JN)

The regulation of host cellular and gut microbial metabolism in the development and prevention of colorectal cancer.

PubMed

Zhou, Cheng-Bei; Fang, Jing-Yuan

2018-01-23

Metabolism regulation is crucial in colorectal cancer (CRC) and has emerged as a remarkable field currently. The cellular metabolism of glucose, amino acids and lipids in CRC are all reprogrammed. Each of them changes tumour microenvironment, modulates bacterial composition and activity, and eventually promotes CRC development. Metabolites such as short chain fatty acids, secondary bile acids, N-nitroso compounds, hydrogen sulphide, polyphenols and toxins like fragilysin, FadA, cytolethal distending toxin and colibactin play a dual role in CRC. The relationship of gut microbe-metabolite is essential in remodelling intestinal microbial ecology composition and metabolic activity. It regulates the metabolism of colonic epithelial cells and changes the tumour microenvironment in CRC. Microbial metabolism manipulation has been considered to be potentially preventive in CRC, but more large-scale clinical trials are required before their application in clinical practice in the near future.

The effect of zebra mussel consumption on growth of freshwater drum in Lake Erie

USGS Publications Warehouse

French, John R. P.; Bur, Michael T.

1996-01-01

We examined food habits and scale annuli of freshwater drum (Aplodinotus grunniens) from western Lake Erie to determine whether increasing predation on zebra mussels (Dreissena polymorpha) had affected growth of freshwater drum. The volume of zebra mussels in drum guts was greater in older fish. Growth of age classes 3–4, which consumed few zebra mussels, was greater in the most productive year for zebra mussels, July 1990–August 1991, than in three prior years. The total lengths of 5-year-old drum changed little. The mean total length of 6-year-old females has declined since the zebra mussel invaded Lake Erie, even through mussels comprised more than two-thirds of gut samples in these fish. These studies suggest that zebra mussels may not benefit freshwater drum when serving as a staple in the diet. PDF

Superstring-inspired SO(10) GUT model with intermediate scale

NASA Astrophysics Data System (ADS)

Sasaki, Ken

1987-12-01

A new mechanism is proposed for the mixing of Weinberg-Salam Higgs fields in superstring-inspired SO(10) models with no SO(10) singlet fields. The higher-dimensional terms in the superpotential can generate both Higgs field mixing and a small mass for the physical neutrino. I would like to thank Professor C. Iso for hospitality extended to me at the Tokyo Institute of Technology.

The Microbiota, the Gut and the Brain in Eating and Alcohol Use Disorders: A ‘Ménage à Trois’?

PubMed Central

Temko, Jamie E.; Bouhlal, Sofia; Farokhnia, Mehdi; Lee, Mary R.; Cryan, John F.; Leggio, Lorenzo

2017-01-01

Abstract Aims Accumulating evidence for the influence of the gut microbiota on the bidirectional communication along the gut-brain axis suggests a role of the gut microbiota in eating disorders (EDs) and alcohol and substance use disorders. The potential influence of altered gut microbiota (dysbiosis) on behaviors associated with such disorders may have implications for developing therapeutic interventions. Methods A systematic review of preclinical and clinical studies evaluating the gut microbiota, EDs and alcohol and substance use disorders was conducted using MEDLINE, Embase and Web of Science databases with the objective being to examine the role of the gut microbiota in behavioral correlates of these disorders. Original papers focused on the gut microbiota and potential behavioral implications were deemed eligible for consideration. Results The resulting 12 publications were limited to gut microbiota studies related to EDs and alcohol and substance use disorders. Some studies suggest that dysbiosis and gut microbial byproducts may influence the pathophysiology of EDs via direct and indirect interference with peptide hormone signaling. Additionally, dysbiosis was shown to be correlated with alcohol use disorder-related symptoms, i.e. craving, depression and anxiety. Finally, a mouse study suggests that manipulations in the gut microbiota may affect cocaine-related behaviors. Conclusions Promising, albeit preliminary, findings suggest a potential role of the gut microbiota in behavioral correlates of EDs and alcohol and substance use disorders. Short summary Preliminary evidence exists supporting the role of the gut microbiota in eating disorders and alcohol and substance use disorders, although additional investigation is needed to determine what is causative versus epiphenomenological. PMID:28482009

Functional Comparison of Bacteria from the Human Gut and Closely Related Non-Gut Bacteria Reveals the Importance of Conjugation and a Paucity of Motility and Chemotaxis Functions in the Gut Environment.

PubMed

Dobrijevic, Dragana; Abraham, Anne-Laure; Jamet, Alexandre; Maguin, Emmanuelle; van de Guchte, Maarten

2016-01-01

The human GI tract is a complex and still poorly understood environment, inhabited by one of the densest microbial communities on earth. The gut microbiota is shaped by millennia of evolution to co-exist with the host in commensal or symbiotic relationships. Members of the gut microbiota perform specific molecular functions important in the human gut environment. This can be illustrated by the presence of a highly expanded repertoire of proteins involved in carbohydrate metabolism, in phase with the large diversity of polysaccharides originating from the diet or from the host itself that can be encountered in this environment. In order to identify other bacterial functions that are important in the human gut environment, we investigated the distribution of functional groups of proteins in a group of human gut bacteria and their close non-gut relatives. Complementary to earlier global comparisons between different ecosystems, this approach should allow a closer focus on a group of functions directly related to the gut environment while avoiding functions related to taxonomically divergent microbiota composition, which may or may not be relevant for gut homeostasis. We identified several functions that are overrepresented in the human gut bacteria which had not been recognized in a global approach. The observed under-representation of certain other functions may be equally important for gut homeostasis. Together, these analyses provide us with new information about this environment so critical to our health and well-being.

Functional Comparison of Bacteria from the Human Gut and Closely Related Non-Gut Bacteria Reveals the Importance of Conjugation and a Paucity of Motility and Chemotaxis Functions in the Gut Environment

PubMed Central

Dobrijevic, Dragana; Abraham, Anne-Laure; Jamet, Alexandre; Maguin, Emmanuelle; van de Guchte, Maarten

2016-01-01

The human GI tract is a complex and still poorly understood environment, inhabited by one of the densest microbial communities on earth. The gut microbiota is shaped by millennia of evolution to co-exist with the host in commensal or symbiotic relationships. Members of the gut microbiota perform specific molecular functions important in the human gut environment. This can be illustrated by the presence of a highly expanded repertoire of proteins involved in carbohydrate metabolism, in phase with the large diversity of polysaccharides originating from the diet or from the host itself that can be encountered in this environment. In order to identify other bacterial functions that are important in the human gut environment, we investigated the distribution of functional groups of proteins in a group of human gut bacteria and their close non-gut relatives. Complementary to earlier global comparisons between different ecosystems, this approach should allow a closer focus on a group of functions directly related to the gut environment while avoiding functions related to taxonomically divergent microbiota composition, which may or may not be relevant for gut homeostasis. We identified several functions that are overrepresented in the human gut bacteria which had not been recognized in a global approach. The observed under-representation of certain other functions may be equally important for gut homeostasis. Together, these analyses provide us with new information about this environment so critical to our health and well-being. PMID:27416027

Incorporating the gut microbiota into models of human and non-human primate ecology and evolution.

PubMed

Amato, Katherine R

2016-01-01

The mammalian gut is home to a diverse community of microbes. Advances in technology over the past two decades have allowed us to examine this community, the gut microbiota, in more detail, revealing a wide range of influences on host nutrition, health, and behavior. These host-gut microbe interactions appear to shape host plasticity and fitness in a variety of contexts, and therefore represent a key factor missing from existing models of human and non-human primate ecology and evolution. However, current studies of the gut microbiota tend to include limited contextual data or are clinical, making it difficult to directly test broad anthropological hypotheses. Here, I review what is known about the animal gut microbiota and provide examples of how gut microbiota research can be integrated into the study of human and non-human primate ecology and evolution with targeted data collection. Specifically, I examine how the gut microbiota may impact primate diet, energetics, disease resistance, and cognition. While gut microbiota research is proliferating rapidly, especially in the context of humans, there remain important gaps in our understanding of host-gut microbe interactions that will require an anthropological perspective to fill. Likewise, gut microbiota research will be an important tool for filling remaining gaps in anthropological research. © 2016 Wiley Periodicals, Inc.

The role of gut bacteria in Schmallenberg virus transmission by Culicoides biting midges

USDA-ARS?s Scientific Manuscript database

When an arbo-virus enters a vector it will first enter the gut system of this insect before entering cells of the insect body. Once in the gut-system, arbo-viruses and gut microbiota can interact with each other. We wondered if different gut bacterial communities could influence virus infection of b...

Baryogenesis in false vacuum

NASA Astrophysics Data System (ADS)

Hamada, Yuta; Yamada, Masatoshi

2017-09-01

The null result in the LHC may indicate that the standard model is not drastically modified up to very high scales, such as the GUT/string scale. Having this in the mind, we suggest a novel leptogenesis scenario realized in the false vacuum of the Higgs field. If the Higgs field develops a large vacuum expectation value in the early universe, a lepton number violating process is enhanced, which we use for baryogenesis. To demonstrate the scenario, several models are discussed. For example, we show that the observed baryon asymmetry is successfully generated in the standard model with higher-dimensional operators.

Renormalization group flow of the Higgs potential.

PubMed

Gies, Holger; Sondenheimer, René

2018-03-06

We summarize results for local and global properties of the effective potential for the Higgs boson obtained from the functional renormalization group, which allows one to describe the effective potential as a function of both scalar field amplitude and renormalization group scale. This sheds light onto the limitations of standard estimates which rely on the identification of the two scales and helps in clarifying the origin of a possible property of meta-stability of the Higgs potential. We demonstrate that the inclusion of higher-dimensional operators induced by an underlying theory at a high scale (GUT or Planck scale) can relax the conventional lower bound on the Higgs mass derived from the criterion of absolute stability.This article is part of the Theo Murphy meeting issue 'Higgs cosmology'. © 2018 The Author(s).

Can We Prevent Obesity-Related Metabolic Diseases by Dietary Modulation of the Gut Microbiota?1

PubMed Central

2016-01-01

Obesity increases the risk of type 2 diabetes, cardiovascular diseases, and certain cancers, which are among the leading causes of death worldwide. Obesity and obesity-related metabolic diseases are characterized by specific alterations in the human gut microbiota. Experimental studies with gut microbiota transplantations in mice and in humans indicate that a specific gut microbiota composition can be the cause and not just the consequence of the obese state and metabolic disease, which suggests a potential for gut microbiota modulation in prevention and treatment of obesity-related metabolic diseases. In addition, dietary intervention studies have suggested that modulation of the gut microbiota can improve metabolic risk markers in humans, but a causal role of the gut microbiota in such studies has not yet been established. Here, we review and discuss the role of the gut microbiota in obesity-related metabolic diseases and the potential of dietary modulation of the gut microbiota in metabolic disease prevention and treatment. PMID:26773017

The human gut microbiota and virome: Potential therapeutic implications.

PubMed

Scarpellini, Emidio; Ianiro, Gianluca; Attili, Fabia; Bassanelli, Chiara; De Santis, Adriano; Gasbarrini, Antonio

2015-12-01

Human gut microbiota is a complex ecosystem with several functions integrated in the host organism (metabolic, immune, nutrients absorption, etc.). Human microbiota is composed by bacteria, yeasts, fungi and, last but not least, viruses, whose composition has not been completely described. According to previous evidence on pathogenic viruses, the human gut harbours plant-derived viruses, giant viruses and, only recently, abundant bacteriophages. New metagenomic methods have allowed to reconstitute entire viral genomes from the genetic material spread in the human gut, opening new perspectives on the understanding of the gut virome composition, the importance of gut microbiome, and potential clinical applications. This review reports the latest evidence on human gut "virome" composition and its function, possible future therapeutic applications in human health in the context of the gut microbiota, and attempts to clarify the role of the gut "virome" in the larger microbial ecosystem. Copyright © 2015 Editrice Gastroenterologica Italiana S.r.l. Published by Elsevier Ltd. All rights reserved.

In vitro organogenesis of gut-like structures from mouse embryonic stem cells.

PubMed

Kuwahara, M; Ogaeri, T; Matsuura, R; Kogo, H; Fujimoto, T; Torihashi, S

2004-04-01

Embryonic stem (ES) cells have pluripotency and give rise to many cell types and tissues, including representatives of all three germ layers in the embryo. We have reported previously that mouse ES cells formed contracting gut-like organs from embryoid bodies (EBs). These gut-like structures contracted spontaneously, and had large lumens surrounded by three layers, i.e. epithelium, lamina propria and muscularis. Ganglia were scattered along the periphery, and interstitial cells of Cajal (ICC) were distributed among the smooth muscle cells. In the present study, to determine whether they can be a model of gut organogenesis, we investigated the formation process of the gut-like structures in comparison with embryonic gut development. As a result, we found that the fundamental process of formation in vitro was similar to embryonic gut development in vivo. The result indicates that the gut-like structure is a useful tool not only for developmental study to determine the factors that induce gut organogenesis, but also for studies of enteric neurone and ICC development.

Metabolic adaptation to a high-fat diet is associated with a change in the gut microbiota.

PubMed

Serino, Matteo; Luche, Elodie; Gres, Sandra; Baylac, Audrey; Bergé, Mathieu; Cenac, Claire; Waget, Aurelie; Klopp, Pascale; Iacovoni, Jason; Klopp, Christophe; Mariette, Jerome; Bouchez, Olivier; Lluch, Jerome; Ouarné, Francoise; Monsan, Pierre; Valet, Philippe; Roques, Christine; Amar, Jacques; Bouloumié, Anne; Théodorou, Vassilia; Burcelin, Remy

2012-04-01

The gut microbiota, which is considered a causal factor in metabolic diseases as shown best in animals, is under the dual influence of the host genome and nutritional environment. This study investigated whether the gut microbiota per se, aside from changes in genetic background and diet, could sign different metabolic phenotypes in mice. The unique animal model of metabolic adaptation was used, whereby C57Bl/6 male mice fed a high-fat carbohydrate-free diet (HFD) became either diabetic (HFD diabetic, HFD-D) or resisted diabetes (HFD diabetes-resistant, HFD-DR). Pyrosequencing of the gut microbiota was carried out to profile the gut microbial community of different metabolic phenotypes. Inflammation, gut permeability, features of white adipose tissue, liver and skeletal muscle were studied. Furthermore, to modify the gut microbiota directly, an additional group of mice was given a gluco-oligosaccharide (GOS)-supplemented HFD (HFD+GOS). Despite the mice having the same genetic background and nutritional status, a gut microbial profile specific to each metabolic phenotype was identified. The HFD-D gut microbial profile was associated with increased gut permeability linked to increased endotoxaemia and to a dramatic increase in cell number in the stroma vascular fraction from visceral white adipose tissue. Most of the physiological characteristics of the HFD-fed mice were modulated when gut microbiota was intentionally modified by GOS dietary fibres. The gut microbiota is a signature of the metabolic phenotypes independent of differences in host genetic background and diet.

Interplay between the gut microbiota and immune responses of ayu (Plecoglossus altivelis) during Vibrio anguillarum infection.

PubMed

Nie, Li; Zhou, Qian-Jin; Qiao, Yan; Chen, Jiong

2017-09-01

Gut microbiota plays fundamental roles in protection against pathogen invasion. However, the mechanism and extent of responses of gut microbiota to pathogenic infection are poorly understood. This study investigated the gut bacterial communities and immune responses of ayu (Plecoglossus altivelis) upon exposure to Vibrio anguillarum. The succession of V. anguillarum infection was evidenced by increased expression of immune genes and bacterial loads in ayu tissues, which in turn altered the composition and predicted functions of gut bacterial community. The dynamics of gut bacterial diversity and evenness were temporally stable in control ayu but were reduced in infected subjects, particularly at the late stages of infection. Variations in the gut microbiota were significantly associated with the expression levels of TNF-α (P = 0.019) and IL-1 β (P = 0.013). The profiles of certain gut bacterial taxa were indicative of V. anguillarum infection. Compared with healthy controls, the ayu infected with V. anguillarum possessed less complex, fewer connected, and lower cooperative gut bacterial interspecies interaction, coinciding with significant shifts in keystone species. These findings imply that V. anguillarum infection substantially disrupted the compositions and interspecies interaction of ayu gut bacterial community, thereby altering gut microbial-mediated functions and inducing host immune responses. This study provides an integrated overview on the interaction between the gut microbiota and host immune responses to pathogen infection from an ecological perspective. Copyright © 2017 Elsevier Ltd. All rights reserved.

Dysbiosis and compositional alterations with aging in the gut microbiota of patients with heart failure

PubMed Central

Kamo, Takehiro; Suda, Wataru; Saga-Kamo, Akiko; Shimizu, Yu; Yagi, Hiroki; Liu, Qing; Nomura, Seitaro; Naito, Atsuhiko T.; Takeda, Norifumi; Harada, Mutsuo; Toko, Haruhiro; Kumagai, Hidetoshi; Ikeda, Yuichi; Takimoto, Eiki; Suzuki, Jun-ichi; Honda, Kenya; Morita, Hidetoshi; Hattori, Masahira; Komuro, Issei

2017-01-01

Emerging evidence has suggested a potential impact of gut microbiota on the pathophysiology of heart failure (HF). However, it is still unknown whether HF is associated with dysbiosis in gut microbiota. We investigated the composition of gut microbiota in patients with HF to elucidate whether gut microbial dysbiosis is associated with HF. We performed 16S ribosomal RNA gene sequencing of fecal samples obtained from 12 HF patients and 12 age-matched healthy control (HC) subjects, and analyzed the differences in gut microbiota. We further compared the composition of gut microbiota of 12 HF patients younger than 60 years of age with that of 10 HF patients 60 years of age or older. The composition of gut microbial communities of HF patients was distinct from that of HC subjects in both unweighted and weighted UniFrac analyses. Eubacterium rectale and Dorea longicatena were less abundant in the gut microbiota of HF patients than in that of HC subjects. Compared to younger HF patients, older HF patients had diminished proportions of Bacteroidetes and larger quantities of Proteobacteria. The genus Faecalibacterium was depleted, while Lactobacillus was enriched in the gut microbiota of older HF patients. These results suggest that patients with HF harbor significantly altered gut microbiota, which varies further according to age. New concept of heart-gut axis has a great potential for breakthroughs in the development of novel diagnostic and therapeutic approach for HF. PMID:28328981

Effects of wheat bran extract rich in arabinoxylan oligosaccharides and resistant starch on overnight glucose tolerance and markers of gut fermentation in healthy young adults.

PubMed

Boll, Elin V Johansson; Ekström, Linda M N K; Courtin, Christophe M; Delcour, Jan A; Nilsson, Anne C; Björck, Inger M E; Östman, Elin M

2016-06-01

Specific combinations of dietary fiber (DF) have been observed to result in improved glucose tolerance at a subsequent standardized breakfast. Arabinoxylan oligosaccharides (AXOS) are considered as DF with prebiotic potential, but so far no studies have investigated their metabolic effects in humans. This randomized cross-over study evaluated the overnight impact of breads containing AXOS-rich wheat bran extract and resistant starch (RS, Hi-Maize), separately or combined, on glucose tolerance, related metabolic parameters and markers of gut fermentation in healthy subjects. Evening reference and test products were: (1) reference white wheat flour bread (WWB), WWB supplemented with (2) AXOS and RS (WWB + AXOS + RS), (3) an increased content of either AXOS (WWB + hiAXOS) or (4) RS (WWB + hiRS). At the subsequent standardized breakfast, blood was sampled for 3 h to monitor glucose, insulin, nonesterified fatty acids, glucagon-like peptide (GLP)-1 and GLP-2. Breath hydrogen (H2) and short chain fatty acids (SCFA) were measured as markers of gut fermentation, and subjective appetite was rated using visual analog scales. Dose-dependent decreases in glucose responses were observed with increased AXOS over the duration of 3 h. Insulin sensitivity index was improved in the morning after the WWB + hiAXOS evening meal. An increase in breath H2 concentration and circulating SCFA was observed in the morning after both evening meals containing AXOS. The present study indicates that AXOS have the potential of improving glucose tolerance in an overnight perspective and suggested mechanisms are improved insulin sensitivity and increased gut fermentation.

Gut microbiota, metabolome and immune signatures in patients with uncomplicated diverticular disease.

PubMed

Barbara, Giovanni; Scaioli, Eleonora; Barbaro, Maria Raffaella; Biagi, Elena; Laghi, Luca; Cremon, Cesare; Marasco, Giovanni; Colecchia, Antonio; Picone, Gianfranco; Salfi, Nunzio; Capozzi, Francesco; Brigidi, Patrizia; Festi, Davide

2017-07-01

The engagement of the gut microbiota in the development of symptoms and complications of diverticular disease has been frequently hypothesised. Our aim was to explore colonic immunocytes, gut microbiota and the metabolome in patients with diverticular disease in a descriptive, cross-sectional, pilot study. Following colonoscopy with biopsy and questionnaire phenotyping, patients were classified into diverticulosis or symptomatic uncomplicated diverticular disease; asymptomatic subjects served as controls. Mucosal immunocytes, in the diverticular region and in unaffected sites, were quantified with immunohistochemistry. Mucosa and faecal microbiota were analysed by the phylogenetic platform high taxonomic fingerprint (HTF)-Microbi.Array, while the metabolome was assessed by 1 H nuclear magnetic resonance. Compared with controls, patients with diverticula, regardless of symptoms, had a >70% increase in colonic macrophages. Their faecal microbiota showed depletion of Clostridium cluster IV. Clostridium cluster IX, Fusobacterium and Lactobacillaceae were reduced in symptomatic versus asymptomatic patients. A negative correlation was found between macrophages and mucosal Clostridium cluster IV and Akkermansia . Urinary and faecal metabolome changes in diverticular disease involved the hippurate and kynurenine pathways. Six urinary molecules allowed to discriminate diverticular disease and control groups with >95% accuracy. Patients with colonic diverticular disease show depletion of microbiota members with anti-inflammatory activity associated with mucosal macrophage infiltration. Metabolome profiles were linked to inflammatory pathways and gut neuromotor dysfunction and showed the ability to discriminate diverticular subgroups and controls. These data pave the way for further large-scale studies specifically aimed at identifying microbiota signatures with a potential diagnostic value in patients with diverticular disease. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.

Large-scale comparative metagenomics of Blastocystis, a common member of the human gut microbiome

PubMed Central

Beghini, Francesco; Pasolli, Edoardo; Truong, Tin Duy; Putignani, Lorenza; Cacciò, Simone M; Segata, Nicola

2017-01-01

The influence of unicellular eukaryotic microorganisms on human gut health and disease is still largely unexplored. Blastocystis spp. commonly colonize the gut, but its clinical significance and ecological role are currently unsettled. We have developed a high-sensitivity bioinformatic pipeline to detect Blastocystis subtypes (STs) from shotgun metagenomics, and applied it to 12 large data sets, comprising 1689 subjects of different geographic origin, disease status and lifestyle. We confirmed and extended previous observations on the high prevalence the microrganism in the population (14.9%), its non-random and ST-specific distribution, and its ability to cause persistent (asymptomatic) colonization. These findings, along with the higher prevalence observed in non-westernized individuals, the lack of positive association with any of the disease considered, and decreased presence in individuals with dysbiosis associated with colorectal cancer and Crohn’s disease, strongly suggest that Blastocystis is a component of the healthy gut microbiome. Further, we found an inverse association between body mass index and Blastocystis, and strong co-occurrence with archaeal organisms (Methanobrevibacter smithii) and several bacterial species. The association of specific microbial community structures with Blastocystis was confirmed by the high predictability (up to 0.91 area under the curve) of the microorganism colonization based on the species-level composition of the microbiome. Finally, we reconstructed and functionally profiled 43 new draft Blastocystis genomes and discovered a higher intra subtype variability of ST1 and ST2 compared with ST3 and ST4. Altogether, we provide an in-depth epidemiologic, ecological, and genomic analysis of Blastocystis, and show how metagenomics can be crucial to advance population genomics of human parasites. PMID:28837129

Slow intestinal transit contributes to elevate urinary p-cresol level in Italian autistic children.

PubMed

Gabriele, Stefano; Sacco, Roberto; Altieri, Laura; Neri, Cristina; Urbani, Andrea; Bravaccio, Carmela; Riccio, Maria Pia; Iovene, Maria Rosaria; Bombace, Francesca; De Magistris, Laura; Persico, Antonio M

2016-07-01

The uremic toxin p-cresol (4-methylphenol) is either of environmental origin or can be synthetized from tyrosine by cresol-producing bacteria present in the gut lumen. Elevated p-cresol amounts have been previously found in the urines of Italian and French autism spectrum disorder (ASD) children up until 8 years of age, and may be associated with autism severity or with the intensity of abnormal behaviors. This study aims to investigate the mechanism producing elevated urinary p-cresol in ASD. Urinary p-cresol levels were thus measured by High Performance Liquid Chromatography in a sample of 53 Italian ASD children assessed for (a) presence of Clostridium spp. strains in the gut by means of an in vitro fecal stool test and of Clostridium difficile-derived toxin A/B in the feces, (b) intestinal permeability using the lactulose/mannitol (LA/MA) test, (c) frequent use of antibiotics due to recurrent infections during the first 2 years of postnatal life, and (d) stool habits with the Bristol Stool Form Scale. Chronic constipation was the only variable significantly associated with total urinary p-cresol concentration (P < 0.05). No association was found with presence of Clostridium spp. in the gut flora (P = 0.92), augmented intestinal permeability (P = 0.18), or frequent use of antibiotics in early infancy (P = 0.47). No ASD child was found to carry C. difficile in the gut or to release toxin A/B in the feces. In conclusion, urinary p-cresol levels are elevated in young ASD children with increased intestinal transit time and chronic constipation. Autism Res 2016, 9: 752-759. © 2015 International Society for Autism Research, Wiley Periodicals, Inc. © 2015 International Society for Autism Research, Wiley Periodicals, Inc.

New Therapeutic Drugs from Bioactive Natural Molecules: the Role of Gut Microbiota Metabolism in Neurodegenerative Diseases.

PubMed

Di Meo, Francesco; Donato, Stella; Di Pardo, Alba; Maglione, Vittorio; Filosa, Stefania; Crispi, Stefania

2018-04-03

The gut-brain axis is considered a neuroendocrine system, which connects brain and gastrointestinal tract and plays an important role in stress response. The homeostasis of gut-brain axis is important for healthy conditions and its alterations are associated to neurological disorders and neurodegenerative diseases. Gut microbiota is a dynamic ecosystem that can be altered by external factors such as diet composition, antibiotics or xenobiotics. Recent advances in gut microbiota analyses indicate that the gut bacterial community plays a key role in maintaining normal brain functions. Recent metagenomic analyses have elucidated that the relationship between gut and brain, either in normal or in pathological conditions, reflects the existence of a "microbiota-gut-brain" axis. Gut microbiota composition can be influenced by dietary ingestion of probiotics or natural bioactive molecules such as prebiotics and polyphenols. Their derivatives coming from microbiota metabolism can affect both gut bacterial composition and brain biochemistry. Modifications of microbiota composition by natural bioactive molecules could be used to restore the altered brain functions, which characterize neurodegenerative diseases, leading to consider these compounds as novel therapeutic strategies for the treatment of neuropathologies. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

Seasonal variation in nutrient utilization shapes gut microbiome structure and function in wild giant pandas.

PubMed

Wu, Qi; Wang, Xiao; Ding, Yun; Hu, Yibo; Nie, Yonggang; Wei, Wei; Ma, Shuai; Yan, Li; Zhu, Lifeng; Wei, Fuwen

2017-09-13

Wild giant pandas use different parts of bamboo (shoots, leaves and stems) and different bamboo species at different times of the year. Their usage of bamboo can be classified temporally into a distinct leaf stage, shoot stage and transition stage. An association between this usage pattern and variation in the giant panda gut microbiome remains unknown. Here, we found associations using a gut metagenomic approach and nutritional analyses whereby diversity of the gut microbial community in the leaf and shoot stages was significantly different. Functional metagenomic analysis showed that in the leaf stage, bacteria species over-represented genes involved in raw fibre utilization and cell cycle control. Thus, raw fibre utilization by the gut microbiome was guaranteed during the nutrient-deficient leaf stage by reinforcing gut microbiome robustness. During the protein-abundant shoot stage, the functional capacity of the gut microbiome expanded to include prokaryotic secretion and signal transduction activity, suggesting active interactions between the gut microbiome and host. These results illustrate that seasonal nutrient variation in wild giant pandas substantially influences gut microbiome composition and function. Nutritional interactions between gut microbiomes and hosts appear to be complex and further work is needed. © 2017 The Author(s).

In vivo aerobic metabolism of the rainbow trout gut and the effects of an acute temperature increase and stress event.

PubMed

Brijs, Jeroen; Gräns, Albin; Hjelmstedt, Per; Sandblom, Erik; van Nuland, Nicole; Berg, Charlotte; Axelsson, Michael

2018-05-24

The fish gut is responsible for numerous potentially energetically costly processes, yet, little is known about its metabolism. Here, we provide the first in vivo measurements for aerobic metabolism of the gut in a teleost fish by measuring gut blood flow, as well as arterial and portal venous oxygen content. At 10°C, gut oxygen uptake rates were 4.3±0.5 ml O 2 h -1 kg -1 (∼11% of whole animal oxygen uptake). Following acute warming to 15°C, gut blood flow increased ∼3.4-fold and gut oxygen uptake rate increased ∼3.7-fold (16.0±3.3 ml O 2 h -1 kg -1 ), now representing ∼25% of whole animal oxygen uptake. Although gut blood flow decreased following an acute stress event at 15°C, gut oxygen uptake remained unchanged due to a ∼2-fold increase in oxygen extraction. The high metabolic thermal sensitivity of the gut discovered here could have important implications on the overall aerobic capacity and performance of fish and warrants further investigations. © 2018. Published by The Company of Biologists Ltd.

Social status shapes the bacterial and fungal gut communities of the honey bee.

PubMed

Yun, Ji-Hyun; Jung, Mi-Ja; Kim, Pil Soo; Bae, Jin-Woo

2018-01-31

Despite the fungal abundance in honey and bee bread, little is known about the fungal gut community of the honey bee and its effect on host fitness. Using pyrosequencing of the 16S rRNA gene and ITS2 region amplicons, we analysed the bacterial and fungal gut communities of the honey bee as affected by the host social status. Both communities were significantly affected by the host social status. The bacterial gut community was similar to those characterised in previous studies. The fungal gut communities of most worker bees were highly dominated by Saccharomyces but foraging bees and queens were colonised by diverse fungal species and Zygosaccharomyces, respectively. The high fungal density and positive correlation between Saccharomyces species and Lactobacillus species, known yeast antagonists, were only observed in the nurse bee; this suggested that the conflict between Saccharomyces and Lactobacillus was compromised by the metabolism of the host and/or other gut microbes. PICRUSt analysis revealed significant differences in enriched gene clusters of the bacterial gut communities of the nurse and foraging bees, suggesting that different host social status might induce changes in the gut microbiota, and, that consequently, gut microbial community shifts to adapt to the gut environment.

Home - Deep Underground Neutrino ExperimentDeep Underground Neutrino

Science.gov Websites

understanding of neutrinos and their role in the universe. DUNE prototype detectors are under construction at understanding of neutrinos and their role in the universe. DUNE_Forces_011116_FINAL Unification of Forces With

A human gut phage catalog correlates the gut phageome with type 2 diabetes.

PubMed

Ma, Yingfei; You, Xiaoyan; Mai, Guoqin; Tokuyasu, Taku; Liu, Chenli

2018-02-01

Substantial efforts have been made to link the gut bacterial community to many complex human diseases. Nevertheless, the gut phages are often neglected. In this study, we used multiple bioinformatic methods to catalog gut phages from whole-community metagenomic sequencing data of fecal samples collected from both type II diabetes (T2D) patients (n = 71) and normal Chinese adults (n = 74). The definition of phage operational taxonomic units (pOTUs) and identification of large phage scaffolds (n = 2567, ≥ 10 k) revealed a comprehensive human gut phageome with a substantial number of novel sequences encoding genes that were unrelated to those in known phages. Interestingly, we observed a significant increase in the number of gut phages in the T2D group and, in particular, identified 7 pOTUs specific to T2D. This finding was further validated in an independent dataset of 116 T2D and 109 control samples. Co-occurrence/exclusion analysis of the bacterial genera and pOTUs identified a complex core interaction between bacteria and phages in the human gut ecosystem, suggesting that the significant alterations of the gut phageome cannot be explained simply by co-variation with the altered bacterial hosts. Alterations in the gut bacterial community have been linked to the chronic disease T2D, but the role of gut phages therein is not well understood. This is the first study to identify a T2D-specific gut phageome, indicating the existence of other mechanisms that might govern the gut phageome in T2D patients. These findings suggest the importance of the phageome in T2D risk, which warrants further investigation.

Mycotoxin: Its Impact on Gut Health and Microbiota

PubMed Central

Liew, Winnie-Pui-Pui; Mohd-Redzwan, Sabran

2018-01-01

The secondary metabolites produced by fungi known as mycotoxins, are capable of causing mycotoxicosis (diseases and death) in human and animals. Contamination of feedstuffs as well as food commodities by fungi occurs frequently in a natural manner and is accompanied by the presence of mycotoxins. The occurrence of mycotoxins' contamination is further stimulated by the on-going global warming as reflected in some findings. This review comprehensively discussed the role of mycotoxins (trichothecenes, zearalenone, fumonisins, ochratoxins, and aflatoxins) toward gut health and gut microbiota. Certainly, mycotoxins cause perturbation in the gut, particularly in the intestinal epithelial. Recent insights have generated an entirely new perspective where there is a bi-directional relationship exists between mycotoxins and gut microbiota, thus suggesting that our gut microbiota might be involved in the development of mycotoxicosis. The bacteria–xenobiotic interplay for the host is highlighted in this review article. It is now well established that a healthy gut microbiota is largely responsible for the overall health of the host. Findings revealed that the gut microbiota is capable of eliminating mycotoxin from the host naturally, provided that the host is healthy with a balance gut microbiota. Moreover, mycotoxins have been demonstrated for modulation of gut microbiota composition, and such alteration in gut microbiota can be observed up to species level in some of the studies. Most, if not all, of the reported effects of mycotoxins, are negative in terms of intestinal health, where beneficial bacteria are eliminated accompanied by an increase of the gut pathogen. The interactions between gut microbiota and mycotoxins have a significant role in the development of mycotoxicosis, particularly hepatocellular carcinoma. Such knowledge potentially drives the development of novel and innovative strategies for the prevention and therapy of mycotoxin contamination and mycotoxicosis. PMID:29535978

Contrasting digestive strategies in four New Zealand herbivorous fishes as reflected by carbohydrase activity profiles.

PubMed

Skea, G L; Mountfort, D O; Clements, K D

2007-01-01

Enzymatic degradation of algal carbohydrates was examined in the New Zealand herbivorous fishes Parma alboscapularis (Pomacentridae), Aplodactylus etheridgii (Aplodactylidae), Girella tricuspidata and G. cyanea (Girellidae). Enzyme extract taken from the anterior gut wall, gut fluid and microbial pellet from sections sampled along the gut were tested for activity against starch, carrageenan, agarose and carboxymethylcellulose. Hydrolysis of starch was greater than for all other substrates tested. Endogenous (host-produced) activity in the anterior gut fluid varied between species in the order G. tricuspidata (7700 units mL(-1))>G. cyanea (2300 units mL(-1))>P. alboscapularis (2000)>A. etheridgii (1400 units mL(-1)) where one unit is equivalent to 1 mug of reducing sugar released per minute. Activity decreased markedly along the gut in all cases, so that at the posterior end of the gut only 0.3-8% of the anterior activity remained in the gut fluid. Enzyme activity against structural carbohydrates was lower than that against starch, and was of exogenous (produced by resident microbiota) origin in all species although the location of activity along the gut differed. The microbial extract of A. etheridgii displayed the highest activity against carrageenan and agarose in all gut sections, reaching maxima of 47 units mL(-1) against carrageenan and 35 units mL(-1) against agarose in the mid-gut microbial extract. Carrageenase and agarase activity in the other three species was <10 units mL(-1) for all gut sections. Results suggest that carrageenan and agarose are potentially important substrates for microbial fermentation, particularly in A. etheridgii, and that there is microbial activity in the mid-gut of this species, rather than primarily in the hind-gut as in other herbivorous species.

The Tie That Binds:. A Fundamental Unit of `Change' in Space and Time

NASA Astrophysics Data System (ADS)

Beichler, James E.

2013-09-01

Why, despite all efforts to the contrary, have attempts at unification based on the supposedly more fundamental quantum theory failed miserably? The truth is that the essential idea or concept of the quantum itself has never been fully understood. What is the quantum, or rather, what is its ultimate nature? Science may be able to work adequately with the quantum; in a sense science is quite articulate in the language of the quantum, i.e., its mathematical interpretation of the quantum mechanics, but science has no idea of the true physical nature of the quantum. Scientists and philosophers have wasted energy and efforts on irrelevant issues such as the debate over determinism and indeterminism instead of carefully analyzing the physical source of the quantum. Only with a true understanding of the physical nature of the quantum will the unification of the quantum and relativity ever become a reality.

Unification of force and substance.

PubMed

Wilczek, Frank

2016-08-28

Maxwell's mature presentation of his equations emphasized the unity of electromagnetism and mechanics, subsuming both as 'dynamical systems'. That intuition of unity has proved both fruitful, as a source of pregnant concepts, and broadly inspiring. A deep aspect of Maxwell's work is its use of redundant potentials, and the associated requirement of gauge symmetry. Those concepts have become central to our present understanding of fundamental physics, but they can appear to be rather formal and esoteric. Here I discuss two things: the physical significance of gauge invariance, in broad terms; and some tantalizing prospects for further unification, building on that concept, that are visible on the horizon today. If those prospects are realized, Maxwell's vision of the unity of field and substance will be brought to a new level.This article is part of the themed issue 'Unifying physics and technology in light of Maxwell's equations'. © 2016 The Author(s).

Unification and mechanistic detail as drivers of model construction: models of networks in economics and sociology.

PubMed

Kuorikoski, Jaakko; Marchionni, Caterina

2014-12-01

We examine the diversity of strategies of modelling networks in (micro) economics and (analytical) sociology. Field-specific conceptions of what explaining (with) networks amounts to or systematic preference for certain kinds of explanatory factors are not sufficient to account for differences in modelling methodologies. We argue that network models in both sociology and economics are abstract models of network mechanisms and that differences in their modelling strategies derive to a large extent from field-specific conceptions of the way in which a good model should be a general one. Whereas the economics models aim at unification, the sociological models aim at a set of mechanism schemas that are extrapolatable to the extent that the underlying psychological mechanisms are general. These conceptions of generality induce specific biases in mechanistic explanation and are related to different views of when knowledge from different fields should be seen as relevant.

Particle physics in the very early universe

NASA Technical Reports Server (NTRS)

Schramm, D. N.

1981-01-01

Events in the very early big bang universe in which elementary particle physics effects may have been dominant are discussed, with attention to the generation of a net baryon number by way of grand unification theory, and emphasis on the possible role of massive neutrinos in increasing current understanding of various cosmological properties and of the constraints placed on neutrino properties by cosmology. It is noted that when grand unification theories are used to describe very early universe interactions, an initially baryon-symmetrical universe can evolve a net baryon excess of 10 to the -9th to 10 to the -11th per photon, given reasonable parameters. If neutrinos have mass, the bulk of the mass of the universe may be in the form of leptons, implying that the form of matter most familiar to physical science may not be the dominant form of matter in the universe.

Parsing with logical variables (logic-based programming systems)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Finin, T.W.; Stone Palmer, M.

1983-01-01

Logic based programming systems have enjoyed an increasing popularity in applied AI work in the last few years. One of the contributions to computational linguistics made by the logic programming paradigm has been the definite clause grammar. In comparing DCGS with previous parsing mechanisms such as ATNS, certain clear advantages are seen. The authors feel that the most important of these advantages are due to the use of logical variables with unification as the fundamental operation on them. To illustrate the power of the logical variable, they have implemented an experimental atn system which treats atn registers as logical variablesmore » and provides a unification operation over them. They aim to simultaneously encourage the use of the powerful mechanisms available in DCGS and demonstrate that some of these techniques can be captured without reference to a resolution theorem prover. 14 references.« less

Theoretical & Experimental Research in Weak, Electromagnetic & Strong Interactions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nandi, Satyanarayan; Babu, Kaladi; Rizatdinova, Flera

The conducted research spans a wide range of topics in the theoretical, experimental and phenomenological aspects of elementary particle interactions. Theory projects involve topics in both the energy frontier and the intensity frontier. The experimental research involves energy frontier with the ATLAS Collaboration at the Large Hadron Collider (LHC). In theoretical research, novel ideas going beyond the Standard Model with strong theoretical motivations were proposed, and their experimental tests at the LHC and forthcoming neutrino facilities were outlined. These efforts fall into the following broad categories: (i) TeV scale new physics models for LHC Run 2, including left-right symmetry andmore » trinification symmetry, (ii) unification of elementary particles and forces, including the unification of gauge and Yukawa interactions, (iii) supersummetry and mechanisms of supersymmetry breaking, (iv) superworld without supersymmetry, (v) general models of extra dimensions, (vi) comparing signals of extra dimensions with those of supersymmetry, (vii) models with mirror quarks and mirror leptons at the TeV scale, (viii) models with singlet quarks and singlet Higgs and their implications for Higgs physics at the LHC, (ix) new models for the dark matter of the universe, (x) lepton flavor violation in Higgs decays, (xi) leptogenesis in radiative models of neutrino masses, (xii) light mediator models of non-standard neutrino interactions, (xiii) anomalous muon decay and short baseline neutrino anomalies, (xiv) baryogenesis linked to nucleon decay, and (xv) a new model for recently observed diboson resonance at the LHC and its other phenomenological implications. The experimental High Energy Physics group has been, and continues to be, a successful and productive contributor to the ATLAS experiment at the LHC. Members of the group performed search for gluinos decaying to stop and top quarks, new heavy gauge bosons decaying to top and bottom quarks, and vector-like quarks produced in pairs and decaying to light quarks. Members of the OSU group played a leading role in the detailed optimization studies for the future ATLAS Inner Tracker (ITk), which will be installed during the Phase-II upgrade, replacing the current tracking system. The proposed studies aim to enhance the ATLAS discovery potential in the high-luminosity LHC era. The group members have contributed to the calibration of algorithms for identifying boosted vector bosons and b-jets, which will help expand the ATLAS reach in many searches for new physics.« less

No Gut No Gain! Enteral Bile Acid Treatment Preserves Gut Growth but Not Parenteral Nutrition-Associated Liver Injury in a Novel Extensive Short Bowel Animal Model.

PubMed

Villalona, Gustavo; Price, Amber; Blomenkamp, Keith; Manithody, Chandrashekhara; Saxena, Saurabh; Ratchford, Thomas; Westrich, Matthew; Kakarla, Vindhya; Pochampally, Shruthika; Phillips, William; Heafner, Nicole; Korremla, Niraja; Greenspon, Jose; Guzman, Miguel A; Kumar Jain, Ajay

2018-04-27

Parenteral nutrition (PN) provides nutrition intravenously; however, this life-saving therapy is associated with significant liver disease. Recent evidence indicates improvement in PN-associated injury in animals with intact gut treated with enteral bile acid (BA), chenodeoxycholic acid (CDCA), and a gut farnesoid X receptor (FXR) agonist, which drives the gut-liver cross talk (GLCT). We hypothesized that similar improvement could be translated in animals with short bowel syndrome (SBS). Using piglets, we developed a novel 90% gut-resected SBS model. Fifteen SBS piglets receiving PN were given CDCA or control (vehicle control) for 2 weeks. Tissue and serum were analyzed posteuthanasia. CDCA increased gut FXR (quantitative polymerase chain reaction; P = .008), but not downstream FXR targets. No difference in gut fibroblast growth factor 19 (FGF19; P = .28) or hepatic FXR (P = .75), FGF19 (P = .86), FGFR4 (P = .53), or Cholesterol 7 α-hydroxylase (P = .61) was noted. PN resulted in cholestasis; however, no improvement was noted with CDCA. Hepatic fibrosis or immunostaining for Ki67, CD3, or Cytokeratin 7 was not different with CDCA. PN resulted in gut atrophy. CDCA preserved (P = .04 vs control) gut mass and villous/crypt ratio. The median (interquartile range) for gut mass for control was 0.28 (0.17-0.34) and for CDCA was 0.33 (0.26-0.46). We note that, unlike in animals with intact gut, in an SBS animal model there is inadequate CDCA-induced activation of gut-derived signaling to cause liver improvement. Thus, it appears that activation of GLCT is critically dependent on the presence of adequate gut. This is clinically relevant because it suggests that BA therapy may not be as effective for patients with SBS. © 2018 American Society for Parenteral and Enteral Nutrition.

Orexigenic Hormone Ghrelin Attenuates Local and Remote Organ Injury after Intestinal Ischemia-Reperfusion

PubMed Central

Wu, Rongqian; Dong, Weifeng; Ji, Youxin; Zhou, Mian; Marini, Corrado P.; Ravikumar, Thanjavur S.; Wang, Ping

2008-01-01

Background Gut ischemia/reperfusion (I/R) injury is a serious condition in intensive care patients. Activation of immune cells adjacent to the huge endothelial cell surface area of the intestinal microvasculature produces initially local and then systemic inflammatory responses. Stimulation of the vagus nerve can rapidly attenuate systemic inflammatory responses through inhibiting the activation of macrophages and endothelial cells. Ghrelin, a novel orexigenic hormone, is produced predominately in the gastrointestinal system. Ghrelin receptors are expressed at a high density in the dorsal vagal complex of the brain stem. In this study, we investigated the regulation of the cholinergic anti-inflammatory pathway by the novel gastrointestinal hormone, ghrelin, after gut I/R. Methods and Findings Gut ischemia was induced by placing a microvascular clip across the superior mesenteric artery for 90 min in male adult rats. Our results showed that ghrelin levels were significantly reduced after gut I/R and that ghrelin administration inhibited pro-inflammatory cytokine release, reduced neutrophil infiltration, ameliorated intestinal barrier dysfunction, attenuated organ injury, and improved survival after gut I/R. Administration of a specific ghrelin receptor antagonist worsened gut I/R-induced organ injury and mortality. To determine whether ghrelin's beneficial effects after gut I/R require the intact vagus nerve, vagotomy was performed in sham and gut I/R animals immediately prior to the induction of gut ischemia. Our result showed that vagotomy completely eliminated ghrelin's beneficial effect after gut I/R. To further confirm that ghrelin's beneficial effects after gut I/R are mediated through the central nervous system, intracerebroventricular administration of ghrelin was performed at the beginning of reperfusion after 90-min gut ischemia. Our result showed that intracerebroventricular injection of ghrelin also protected the rats from gut I/R injury. Conclusions These findings suggest that ghrelin attenuates excessive inflammation and reduces organ injury after gut I/R through activation of the cholinergic anti-inflammatory pathway. PMID:18431503

Antibiotic-induced changes in the microbiota disrupt redox dynamics in the gut

PubMed Central

Reese, Aspen T; Cho, Eugenia H; Klitzman, Bruce; Nichols, Scott P; Wisniewski, Natalie A; Villa, Max M; Durand, Heather K; Jiang, Sharon; Midani, Firas S; Nimmagadda, Sai N; O'Connell, Thomas M; Wright, Justin P; Deshusses, Marc A

2018-01-01

How host and microbial factors combine to structure gut microbial communities remains incompletely understood. Redox potential is an important environmental feature affected by both host and microbial actions. We assessed how antibiotics, which can impact host and microbial function, change redox state and how this contributes to post-antibiotic succession. We showed gut redox potential increased within hours of an antibiotic dose in mice. Host and microbial functioning changed under treatment, but shifts in redox potentials could be attributed specifically to bacterial suppression in a host-free ex vivo human gut microbiota model. Redox dynamics were linked to blooms of the bacterial family Enterobacteriaceae. Ecological succession to pre-treatment composition was associated with recovery of gut redox, but also required dispersal from unaffected gut communities. As bacterial competition for electron acceptors can be a key ecological factor structuring gut communities, these results support the potential for manipulating gut microbiota through managing bacterial respiration. PMID:29916366

Dysbiosis of gut microbiota and microbial metabolites in Parkinson's Disease.

PubMed

Sun, Meng-Fei; Shen, Yan-Qin

2018-04-26

Gut microbial dysbiosis and alteration of microbial metabolites in Parkinson's disease (PD) have been increasingly reported. Dysbiosis in the composition and abundance of gut microbiota can affect both the enteric nervous system and the central nervous system (CNS), indicating the existence of a microbiota-gut-brain axis and thereby causing CNS diseases. Disturbance of the microbiota-gut-brain axis has been linked to specific microbial products that are related to gut inflammation and neuroinflammation. Future directions should therefore focus on the exploration of specific gut microbes or microbial metabolites that contribute to the development of PD. Microbiota-targeted interventions, such as antibiotics, probiotics and fecal microbiota transplantation, have been shown to favorably affect host health. In this review, recent findings regarding alterations and the role of gut microbiota and microbial metabolites in PD are summarized, and potential molecular mechanisms and microbiota-targeted interventions in PD are discussed. Copyright © 2018. Published by Elsevier B.V.

The Second Brain: Is the Gut Microbiota a Link Between Obesity and Central Nervous System Disorders?

PubMed Central

Ochoa-Repáraz, Javier; Kasper, Lloyd H.

2016-01-01

The gut-brain axis is a bi-directional integrated system composed by immune, endocrine and neuronal components by which the gap between the gut microbiota and the brain is significantly impacted. An increasing number of different gut microbial species are now postulated to regulate brain function in health and disease. The westernized diet is hypothesized to be the cause of the current obesity levels in many countries, a major socio-economical health problem. Experimental and epidemiological evidence suggest that the gut microbiota is responsible for significant immunologic, neuronal and endocrine changes that lead to obesity. We hypothesize that the gut microbiota, and changes associated with diet, affect the gut-brain axis and may possibly contribute to the development of mental illness. In this review, we discuss the links between diet, gut dysbiosis, obesity, and immunologic and neurologic diseases that impact brain function and behavior. PMID:26865085

The Second Brain: Is the Gut Microbiota a Link Between Obesity and Central Nervous System Disorders?

PubMed

Ochoa-Repáraz, Javier; Kasper, Lloyd H

2016-03-01

The gut-brain axis is a bi-directional integrated system composed by immune, endocrine, and neuronal components by which the gap between the gut microbiota and the brain is significantly impacted. An increasing number of different gut microbial species are now postulated to regulate brain function in health and disease. The westernized diet is hypothesized to be the cause of the current obesity levels in many countries, a major socio-economical health problem. Experimental and epidemiological evidence suggest that the gut microbiota is responsible for significant immunologic, neuronal, and endocrine changes that lead to obesity. We hypothesize that the gut microbiota, and changes associated with diet, affect the gut-brain axis and may possibly contribute to the development of mental illness. In this review, we discuss the links between diet, gut dysbiosis, obesity, and immunologic and neurologic diseases that impact brain function and behavior.

Non-celiac gluten sensitivity triggers gut dysbiosis, neuroinflammation, gut-brain axis dysfunction, and vulnerability for dementia.

PubMed

Daulatzai, Mak Adam

2015-01-01

The non-celiac gluten sensitivity (NCGS) is a chronic functional gastrointestinal disorder which is very common world wide. The human gut harbors microbiota which has a wide variety of microbial organisms; they are mainly symbiotic and important for well being. However, "dysbiosis" - i.e. an alteration in normal commensal gut microbiome with an increase in pathogenic microbes, impacts homeostasis/health. Dysbiosis in NCGS causes gut inflammation, diarrhea, constipation, visceral hypersensitivity, abdominal pain, dysfunctional metabolic state, and peripheral immune and neuro-immune communication. Thus, immune-mediated gut and extra-gut dysfunctions, due to gluten sensitivity with comorbid diarrhea, may last for decades. A significant proportion of NCGS patients may chronically consume alcohol, non-steroidal anti-inflammatory drugs, and fatty diet, as well as suffer from various comorbid disorders. The above pathophysiological substrate and dysbiosis are underpinned by dysfunctional bidirectional "Gut-Brain Axis" pathway. Pathogenic gut microbiota is known to upregulate gut- and systemic inflammation (due to lipopolysaccharide from pathogenic bacteria and synthesis of pro-inflammatory cytokines); they enhance energy harvest, cause obesity, insulin resistance, and dysfunctional vago-vagal gut-brain axis. Conceivably, the above cascade of pathology may promote various pathophysiological mechanisms, neuroinflammation, and cognitive dysfunction. Hence, dysbiosis, gut inflammation, and chronic dyshomeostasis are of great clinical relevance. It is argued here that we need to be aware of NCGS and its chronic pathophysiological impact. Therapeutic measures including probiotics, vagus nerve stimulation, antioxidants, alpha 7 nicotinic receptor agonists, and corticotropin-releasing factor receptor 1 antagonist may ameliorate neuroinflammation and oxidative stress in NCGS; they may therefore, prevent cognitive dysfunction and vulnerability to Alzheimer's disease.

Pycnoscelus surinamensis cockroach gut microbiota respond consistently to a fungal diet without mirroring those of fungus-farming termites.

PubMed

Richards, Callum; Otani, Saria; Mikaelyan, Aram; Poulsen, Michael

2017-01-01

The gut microbiotas of cockroaches and termites play important roles in the symbiotic digestion of dietary components, such as lignocellulose. Diet has been proposed as a primary determinant of community structure within the gut, acting as a selection force to shape the diversity observed within this "bioreactor", and as a key factor for the divergence of the termite gut microbiota from the omnivorous cockroach ancestor. The gut microbiota in most termites supports primarily the breakdown of lignocellulose, but the fungus-farming sub-family of higher termites has become similar in gut microbiota to the ancestral omnivorous cockroaches. To assess the importance of a fungus diet as a driver of community structure, we compare community compositions in the guts of experimentally manipulated Pycnoscelus surinamensis cockroaches fed on fungus cultivated by fungus-farming termites. MiSeq amplicon analysis of gut microbiotas from 49 gut samples showed a step-wise gradient pattern in community similarity that correlated with an increase in the proportion of fungal material provided to the cockroaches. Comparison of the taxonomic composition of manipulated communities to that of gut communities of a fungus-feeding termite species showed that although some bacteria OTUs shared by P. surinamensis and the farming termites increased in the guts of cockroaches on a fungal diet, cockroach communities remained distinct from those of termites. These results demonstrate that a fungal diet can play a role in structuring gut community composition, but at the same time exemplifies how original community compositions constrain the magnitude of such change.

Comparison of the Distal Gut Microbiota from People and Animals in Africa

PubMed Central

Ellis, Richard J.; Bruce, Kenneth D.; Jenkins, Claire; Stothard, J. Russell; Ajarova, Lilly; Mugisha, Lawrence; Viney, Mark E.

2013-01-01

The gut microbiota plays a key role in the maintenance of healthy gut function as well as many other aspects of health. High-throughput sequence analyses have revealed the composition of the gut microbiota, showing that there is a core signature to the human gut microbiota, as well as variation in its composition between people. The gut microbiota of animals is also being investigated. We are interested in the relationship between bacterial taxa of the human gut microbiota and those in the gut microbiota of domestic and semi-wild animals. While it is clear that some human gut bacterial pathogens come from animals (showing that human – animal transmission occurs), the extent to which the usually non-pathogenic commensal taxa are shared between humans and animals has not been explored. To investigate this we compared the distal gut microbiota of humans, cattle and semi-captive chimpanzees in communities that are geographically sympatric in Uganda. The gut microbiotas of these three host species could be distinguished by the different proportions of bacterial taxa present. We defined multiple operational taxonomic units (OTUs) by sequence similarity and found evidence that some OTUs were common between human, cattle and chimpanzees, with the largest number of shared OTUs occurring between chimpanzees and humans, as might be expected with their close physiological similarity. These results show the potential for the sharing of usually commensal bacterial taxa between humans and other animals. This suggests that further investigation of this phenomenon is needed to fully understand how it drives the composition of human and animal gut microbiotas. PMID:23355898

Cospeciation of gut microbiota with hominids

PubMed Central

Moeller, Andrew H.; Caro-Quintero, Alejandro; Mjungu, Deus; Georgiev, Alexander V.; Lonsdorf, Elizabeth V.; Muller, Martin N.; Pusey, Anne E.; Peeters, Martine; Hahn, Beatrice H.; Ochman, Howard

2016-01-01

The evolutionary origins of the bacterial lineages that populate the human gut are unknown. Here we show that multiple lineages of the predominant bacterial taxa in the gut arose via cospeciation with humans, chimpanzees, bonobos, and gorillas over the past 15 million years. Analyses of strain-level bacterial diversity within hominid gut microbiomes revealed that clades of Bacteroidaceae and Bifidobacteriaceae have been maintained exclusively within host lineages across hundreds of thousands of host generations. Divergence times of these cospeciating gut bacteria are congruent with those of hominids, indicating that nuclear, mitochondrial, and gut bacterial genomes diversified in concert during hominid evolution. This study identifies human gut bacteria descended from ancient symbionts that speciated simultaneously with humans and the African apes. PMID:27463672

The Reciprocal Interactions between Polyphenols and Gut Microbiota and Effects on Bioaccessibility

PubMed Central

Ozdal, Tugba; Sela, David A.; Xiao, Jianbo; Boyacioglu, Dilek; Chen, Fang; Capanoglu, Esra

2016-01-01

As of late, polyphenols have increasingly interested the scientific community due to their proposed health benefits. Much of this attention has focused on their bioavailability. Polyphenol–gut microbiota interactions should be considered to understand their biological functions. The dichotomy between the biotransformation of polyphenols into their metabolites by gut microbiota and the modulation of gut microbiota composition by polyphenols contributes to positive health outcomes. Although there are many studies on the in vivo bioavailability of polyphenols, the mutual relationship between polyphenols and gut microbiota is not fully understood. This review focuses on the biotransformation of polyphenols by gut microbiota, modulation of gut microbiota by polyphenols, and the effects of these two-way mutual interactions on polyphenol bioavailability, and ultimately, human health. PMID:26861391

Gut Microbiota and Nonalcoholic Fatty Liver Disease: Insights on Mechanisms and Therapy

PubMed Central

Ma, Junli; Zhou, Qihang; Li, Houkai

2017-01-01

The gut microbiota plays critical roles in development of obese-related metabolic diseases such as nonalcoholic fatty liver disease (NAFLD), type 2 diabetes(T2D), and insulin resistance(IR), highlighting the potential of gut microbiota-targeted therapies in these diseases. There are various ways that gut microbiota can be manipulated, including through use of probiotics, prebiotics, synbiotics, antibiotics, and some active components from herbal medicines. In this review, we review the main roles of gut microbiota in mediating the development of NAFLD, and the advances in gut microbiota-targeted therapies for NAFLD in both the experimental and clinical studies, as well as the conclusions on the prospect of gut microbiota-targeted therapies in the future. PMID:29035308

Leptoquark mechanism of neutrino masses within the grand unification framework

NASA Astrophysics Data System (ADS)

Doršner, Ilja; Fajfer, Svjetlana; Košnik, Nejc

2017-06-01

We demonstrate the viability of the one-loop neutrino mass mechanism within the framework of grand unification when the loop particles comprise scalar leptoquarks (LQs) and quarks of the matching electric charge. This mechanism can be implemented in both supersymmetric and non-supersymmetric models and requires the presence of at least one LQ pair. The appropriate pairs for the neutrino mass generation via the up-type and down-type quark loops are S_3-R_2 and S_{1, 3}-\\tilde{R}_2, respectively. We consider two distinct regimes for the LQ masses in our analysis. The first regime calls for very heavy LQs in the loop. It can be naturally realized with the S_{1, 3}-\\tilde{R}_2 scenarios when the LQ masses are roughly between 10^{12} and 5 × 10^{13} GeV. These lower and upper bounds originate from experimental limits on partial proton decay lifetimes and perturbativity constraints, respectively. Second regime corresponds to the collider accessible LQs in the neutrino mass loop. That option is viable for the S_3-\\tilde{R}_2 scenario in the models of unification that we discuss. If one furthermore assumes the presence of the type II see-saw mechanism there is an additional contribution from the S_3-R_2 scenario that needs to be taken into account beside the type II see-saw contribution itself. We provide a complete list of renormalizable operators that yield necessary mixing of all aforementioned LQ pairs using the language of SU(5). We furthermore discuss several possible embeddings of this mechanism in SU(5) and SO(10) gauge groups.

Variants of kinetically modified non-minimal Higgs inflation in supergravity

NASA Astrophysics Data System (ADS)

Pallis, C.

2016-10-01

We consider models of chaotic inflation driven by the real parts of a conjugate pair of Higgs superfields involved in the spontaneous breaking of a grand unification symmetry at a scale assuming its Supersymmetric (SUSY) value. Employing Kähler potentials with a prominent shift-symmetric part proportional to c- and a tiny violation, proportional to c+, included in a logarithm we show that the inflationary observables provide an excellent match to the recent Planck and BICAP2/Keck Array results setting, e.g., 6.4 · 10-3 lesssim r± = c+/c- lesssim 1/N where N = 2 or 3 is the prefactor of the logarithm. Deviations of these prefactors from their integer values above are also explored and a region where hilltop inflation occurs is localized. Moreover, we analyze two distinct possible stabilization mechanisms for the non-inflaton accompanying superfield, one tied to higher order terms and one with just quadratic terms within the argument of a logarithm with positive prefactor NS < 6. In all cases, inflation can be attained for subplanckian inflaton values with the corresponding effective theories retaining the perturbative unitarity up to the Planck scale.

G{sub 2}-MSSM: An M theory motivated model of particle physics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Acharya, Bobby S.; Bobkov, Konstantin; Kane, Gordon L.

2008-09-15

We continue our study of the low energy implications of M theory vacua on G{sub 2}-manifolds, undertaken in B. S. Acharya, K. Bobkov, G. L. Kane, P. Kumar, and J. Shao, Phys. Rev. D 76, 126010 (2007); B. Acharya, K. Bobkov, G. Kane, P. Kumar, and D. Vaman, Phys. Rev. Lett. 97, 191601 (2006), where it was shown that the moduli can be stabilized and a TeV scale generated, with the Planck scale as the only dimensionful input. A well-motivated phenomenological model, the G{sub 2}-MSSM, can be naturally defined within the above framework. In this paper, we study some ofmore » the important phenomenological features of the G{sub 2}-MSSM. In particular, the soft supersymmetry breaking parameters and the superpartner spectrum are computed. The G{sub 2}-MSSM generically gives rise to light gauginos and heavy scalars with wino lightest supersymmetric particles when one tunes the cosmological constant. Electroweak symmetry breaking is present but fine-tuned. The G{sub 2}-MSSM is also naturally consistent with precision gauge coupling unification. The phenomenological consequences for cosmology and collider physics of the G{sub 2}-MSSM will be reported in more detail soon.« less

Is long-term change in the abyssal Northeast Atlantic driven by qualitative changes in export flux? Evidence from selective feeding in deep-sea holothurians

NASA Astrophysics Data System (ADS)

Wigham, in deep-sea holothurians [review article] B. D.; Hudson, I. R.; Billett, D. S. M.; Wolff, G. A.

2003-12-01

The Porcupine Abyssal Plain (NE Atlantic) time-series has shown large, wide-scale, changes in the composition of the benthic community at 4800 m depth (48°50‧N, 16°30‧W). The abundance of holothurians has increased significantly since 1996 and one species in particular, Amperimarosea, has increased in abundance by three orders of magnitude. Environmental forcing in the form of phytodetrital food supply to the benthos is believed to be driving these changes. Chlorophyll and carotenoid pigments were determined from the gut sediments of seven species of abyssal holothurian, sampled from the Porcupine Abyssal Plain during Autumn 2000 and Spring 2002. These two samples fell either side of the main phytoplankton bloom in the NE Atlantic, providing an opportunity for seasonal comparisons. Significant inter-species differences in pigment profiles were observed among the seven species. Seasonal differences were noted among four species sampled in both time periods. All seven species were collected from the same geographical area and depth. As algal pigments cannot be synthesised by the holothurians, they provide good biomarkers for the composition of the phytodetritus. Differences in pigments from gut sediment profiles are indicative of selective feeding among the holothurians. A.rosea had a gut profile dominated by the pigments zeaxanthin, chlorophyll a/echineone and β-carotene; these pigments were all present in significantly smaller quantities in the other species. The high quantities of these pigments are indicative of a diet rich in cyanobacteria. The gut sediments of A. rosea also lacked many chloropigments characteristic of other phytoplankton groups, which were observed in the guts of other holothurian species. Ovarian tissue for the five species taken in the pre-spring bloom 2002 sample were examined. All species showed similar carotenoid profiles, dominated by zeaxanthin, echinenone and β-carotene, all of which are important compounds for reproductive success in echinoderms. The differences in gut pigment profiles highlight the potential for several species of deposit-feeding holothurians to partition the same phytodetrital food source, possibly providing a mechanism for maintaining the high diversity of deposit feeders at abyssal depths. The dominance of reproductively important carotenoids in the guts and gonads of A. rosea may highlight the ability of this species to rapidly utilise any change in the composition of the phytodetrital flux and translate that advantage into a successful reproductive and recruitment event. The results are discussed in relation to work on bathyal holothurians and the potential for food-driven regime shifts in both the abyssal and bathyal Northeast Atlantic.

Dietary Factors Modulate Colonic Tumorigenesis Through the Interaction of Gut Microbiota and Host Chloride Channels.

PubMed

Zhang, Yong; Kang, Chao; Wang, Xiao-Lan; Zhou, Min; Chen, Meng-Ting; Zhu, Xiao-Hui; Liu, Kai; Wang, Bin; Zhang, Qian-Yong; Zhu, Jun-Dong; Mi, Man-Tian

2018-03-01

In recent decades, the association among diet, gut microbiota, and the risk of colorectal cancer (CRC) has been established. Gut microbiota and associated metabolites, such as bile acids and butyrate, are now known to play a key role in CRC development. The aim of this study is to identify that the progression to CRC is influenced by cholic acid, sodium butyrate, a high-fat diet, or different dose of dihydromyricetin (DMY) interacted with gut microbiota. An AOM/DSS (azoxymethan/dextran sodium sulfate) model is established to study the gut microbiota compsition before and after tumor formation during colitis-induced tumorigenesis. All above dietary factors profoundly influence the composition of gut microbiota and host colonic tumorigenesis. In addition, mice with DMY-modified initial microbiota display different degrees of chemically induced tumorigenesis. Mechanism analysis reveals that gut microbiota-associated chloride channels participated in colon tumorigenesis. Gut microbiota changes occur in the hyperproliferative stage before tumor formation. Gut microbiota and host chloride channels, both of which are regulated by dietary factors, are associated with CRC development. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Understanding the Molecular Mechanisms of the Interplay Between Herbal Medicines and Gut Microbiota.

PubMed

Xu, Jun; Chen, Hu-Biao; Li, Song-Lin

2017-09-01

Herbal medicines (HMs) are much appreciated for their significant contribution to human survival and reproduction by remedial and prophylactic management of diseases. Defining the scientific basis of HMs will substantiate their value and promote their modernization. Ever-increasing evidence suggests that gut microbiota plays a crucial role in HM therapy by complicated interplay with HM components. This interplay includes such activities as: gut microbiota biotransforming HM chemicals into metabolites that harbor different bioavailability and bioactivity/toxicity from their precursors; HM chemicals improving the composition of gut microbiota, consequently ameliorating its dysfunction as well as associated pathological conditions; and gut microbiota mediating the interactions (synergistic and antagonistic) between the multiple chemicals in HMs. More advanced experimental designs are recommended for future study, such as overall chemical characterization of gut microbiota-metabolized HMs, direct microbial analysis of HM-targeted gut microbiota, and precise gut microbiota research model development. The outcomes of such research can further elucidate the interactions between HMs and gut microbiota, thereby opening a new window for defining the scientific basis of HMs and for guiding HM-based drug discovery. © 2016 Wiley Periodicals, Inc.

Are the Gut Bacteria Telling Us to Eat or Not to Eat? Reviewing the Role of Gut Microbiota in the Etiology, Disease Progression and Treatment of Eating Disorders.

PubMed

Lam, Yan Y; Maguire, Sarah; Palacios, Talia; Caterson, Ian D

2017-06-14

Traditionally recognized as mental illnesses, eating disorders are increasingly appreciated to be biologically-driven. There is a growing body of literature that implicates a role of the gut microbiota in the etiology and progression of these conditions. Gut bacteria may act on the gut-brain axis to alter appetite control and brain function as part of the genesis of eating disorders. As the illnesses progress, extreme feeding patterns and psychological stress potentially feed back to the gut ecosystem that can further compromise physiological, cognitive, and social functioning. Given the established causality between dysbiosis and metabolic diseases, an altered gut microbial profile is likely to play a role in the co-morbidities of eating disorders with altered immune function, short-chain fatty acid production, and the gut barrier being the key mechanistic links. Understanding the role of the gut ecosystem in the pathophysiology of eating disorders will provide critical insights into improving current treatments and developing novel microbiome-based interventions that will benefit patients with eating disorders.

Diminution of the gut resistome after a gut microbiota-targeted dietary intervention in obese children

PubMed Central

Wu, Guojun; Zhang, Chenhong; Wang, Jing; Zhang, Feng; Wang, Ruirui; Shen, Jian; Wang, Linghua; Pang, Xiaoyan; Zhang, Xiaojun; Zhao, Liping; Zhang, Menghui

2016-01-01

The gut microbiome represents an important reservoir of antibiotic resistance genes (ARGs). Effective methods are urgently needed for managing the gut resistome to fight against the antibiotic resistance threat. In this study, we show that a gut microbiota-targeted dietary intervention, which shifts the dominant fermentation of gut bacteria from protein to carbohydrate, significantly diminished the gut resistome and alleviated metabolic syndrome in obese children. Of the non-redundant metagenomic gene catalog of ~2 × 106 microbial genes, 399 ARGs were identified in 131 gene types and conferred resistance to 47 antibiotics. Both the richness and diversity of the gut resistome were significantly reduced after the intervention. A total of 201 of the 399 ARGs were carried in 120 co-abundance gene groups (CAGs) directly binned from the gene catalog across both pre-and post-intervention samples. The intervention significantly reduced several CAGs in Klebsiella, Enterobacter and Escherichia, which were the major hubs for multiple resistance gene types. Thus, dietary intervention may become a potentially effective method for diminishing the gut resistome. PMID:27044409

Diminution of the gut resistome after a gut microbiota-targeted dietary intervention in obese children.

PubMed

Wu, Guojun; Zhang, Chenhong; Wang, Jing; Zhang, Feng; Wang, Ruirui; Shen, Jian; Wang, Linghua; Pang, Xiaoyan; Zhang, Xiaojun; Zhao, Liping; Zhang, Menghui

2016-04-05

The gut microbiome represents an important reservoir of antibiotic resistance genes (ARGs). Effective methods are urgently needed for managing the gut resistome to fight against the antibiotic resistance threat. In this study, we show that a gut microbiota-targeted dietary intervention, which shifts the dominant fermentation of gut bacteria from protein to carbohydrate, significantly diminished the gut resistome and alleviated metabolic syndrome in obese children. Of the non-redundant metagenomic gene catalog of ~2 × 10(6) microbial genes, 399 ARGs were identified in 131 gene types and conferred resistance to 47 antibiotics. Both the richness and diversity of the gut resistome were significantly reduced after the intervention. A total of 201 of the 399 ARGs were carried in 120 co-abundance gene groups (CAGs) directly binned from the gene catalog across both pre-and post-intervention samples. The intervention significantly reduced several CAGs in Klebsiella, Enterobacter and Escherichia, which were the major hubs for multiple resistance gene types. Thus, dietary intervention may become a potentially effective method for diminishing the gut resistome.

Allometry of animal-microbe interactions and global census of animal-associated microbes.

PubMed

Kieft, Thomas L; Simmons, Karen A

2015-07-07

Animals live in close association with microorganisms, mostly prokaryotes, living in or on them as commensals, mutualists or parasites, and profoundly affecting host fitness. Most animal-microbe studies focus on microbial community structure; for this project, allometry (scaling of animal attributes with animal size) was applied to animal-microbe relationships across a range of species spanning 12 orders of magnitude in animal mass, from nematodes to whales. Microbial abundances per individual animal were gleaned from published literature and also microscopically counted in three species. Abundance of prokaryotes/individual versus animal mass scales as a nearly linear power function (exponent = 1.07, R(2) = 0.94). Combining this power function with allometry of animal abundance indicates that macrofauna have an outsized share of animal-associated microorganisms. The total number of animal-associated prokaryotes in Earth's land animals was calculated to be 1.3-1.4 × 10(25) cells and the total of marine animal-associated microbes was calculated to be 8.6-9.0 × 10(24) cells. Animal-associated microbes thus total 2.1-2.3 × 10(25) of the approximately 10(30) prokaryotes on the Earth. Microbes associated with humans comprise 3.3-3.5% of Earth's animal-associated microbes, and domestic animals harbour 14-20% of all animal-associated microbes, adding a new dimension to the scale of human impact on the biosphere. This novel allometric power function may reflect underlying mechanisms involving the transfer of energy and materials between microorganisms and their animal hosts. Microbial diversity indices of animal gut communities and gut microbial species richness for 60 mammals did not indicate significant scaling relationships with animal body mass; however, further research in this area is warranted. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

The fusion of MBB with VFW finally brought to completion

NASA Technical Reports Server (NTRS)

1981-01-01

Two newspaper type articles describing the final, long awaited unification of the two German Air and Space companies, MBB and VFW are presented. Government participation in this "fusion" arrangement and the advantages expected to accrue are discussed.

76 FR 15209 - 150th Anniversary of the Unification of Italy, 2011

Federal Register 2010, 2011, 2012, 2013, 2014

2011-03-21

... millions of American women and men of Italian descent who strengthen and enrich our Nation. Italy and the..., and the universal human rights our countries both respect and uphold. As we mark this important...

Gravitational Self-Energy as the Litmus of Reality

NASA Astrophysics Data System (ADS)

Jones, K. R. W.

It is argued that the correct physical treatment of self-energy in Newtonian quantum gravity offers a constrained and predictive discriminator for the interpretation of ψ, and thus a clear point of departure for the unification of modern physics.

Theory and phenomenology of Planckian interacting massive particles as dark matter

NASA Astrophysics Data System (ADS)

Garny, Mathias; Palessandro, Andrea; Sandora, McCullen; Sloth, Martin S.

2018-02-01

Planckian Interacting Dark Matter (PIDM) is a minimal scenario of dark matter assuming only gravitational interactions with the standard model and with only one free parameter, the PIDM mass. PIDM can be successfully produced by gravitational scattering in the thermal plasma of the Standard Model sector after inflation in the PIDM mass range from TeV up to the GUT scale, if the reheating temperature is sufficiently high. The minimal assumption of a GUT scale PIDM mass can be tested in the future by measurements of the primordial tensor-to-scalar ratio. While large primordial tensor modes would be in tension with the QCD axion as dark matter in a large mass range, it would favour the PIDM as a minimal alternative to WIMPs. Here we generalise the previously studied scalar PIDM scenario to the case of fermion, vector and tensor PIDM scenarios, and show that the phenomenology is nearly identical, independent of the spin of the PIDM. We also consider the specific realisation of the PIDM as the Kaluza-Klein excitation of the graviton in orbifold compactifications of string theory, as well as in models of monodromy inflation and in Higgs inflation. Finally we discuss the possibility of indirect detection of PIDM through non-perturbative decay.

The gut microbiota, obesity and insulin resistance

USDA-ARS?s Scientific Manuscript database

The human gut is densely populated by commensal and symbiotic microbes (the "gut microbiota"), with the majority of the constituent microorganisms being bacteria. Accumulating evidence indicates that the gut microbiota plays a significant role in the development of obesity, obesity-associated inflam...

Composition of the bacterial community in the gut of the pine engraver, Ips pini (Say) (Coloptera) colonizing red pine

Treesearch

Italo Jr. Delalibera; Archana Vasanthakumar; Benjamin J. Burwitz; Patrick D. Schloss; Kier D. Klepzig; Jo Handelsman; Kenneth F. Raffa

2007-01-01

The gut bacterial community of a bark beetle, the pine engraver Ips pini (Say), was characterized using culture-dependent and culture-independent methods. Bacteria from individual guts of larvae, pupae and adults were cultured and DNA was extracted from samples of pooled larval guts. Analysis of 16S rRNA gene sequences amplified directly from the gut...

[Research advances in the relationship between childhood malnutrition and gut microbiota].

PubMed

Wang, Hui-Hui; Wen, Fei-Qiu; Wei, Ju-Rong

2016-11-01

Childhood malnutrition is an important disease threatening healthy growth of children worldwide. Gut microbiota has close links to food digestion, absorption and intestinal function. Current research considers that alterations in gut microbiota have been strongly implicated in childhood malnutrition. This review article addresses the latest understanding and evidence of interrelationship between gut microbiota and individual nutrition status, the changes of gut microbiota in different types of malnutrition, and the attribution of gut microbiota in the treatment and prognosis of malnutrition. It provides in depth understanding of childhood malnutrition from the perspective of microbiome.

Impact of whole grains on the gut microbiota: the next frontier for oats?

PubMed

Rose, Devin J

2014-10-01

The gut microbiota plays important roles in proper gut function and can contribute to or help prevent disease. Whole grains, including oats, constitute important sources of nutrients for the gut microbiota and contribute to a healthy gut microbiome. In particular, whole grains provide NSP and resistant starch, unsaturated TAG and complex lipids, and phenolics. The composition of these constituents is unique in oats compared with other whole grains. Therefore, oats may contribute distinctive effects on gut health relative to other grains. Studies designed to determine these effects may uncover new human-health benefits of oat consumption.

Insights into the gut microbiota of freshwater shrimp and its associations with the surrounding microbiota and environmental factors.

PubMed

Zhao, Yanting; Duan, Cuilan; Zhang, Xuxiang; Chen, Huangen; Ren, Hongqiang; Yin, Ying; Ye, Lin

2018-04-23

The gut microbiota of aquatic animals plays a crucial role in host health through nutrient acquisition and outcompetition of pathogens. In this study, based on the high-throughput sequencing of 16S rRNA gene amplicons, we examined the bacterial communities in the gut of freshwater shrimp ( Macrobrachium nipponense ) and in their living environments (sediment and pond water) and analyzed the effects of abiotic and biotic factors on the shrimp gut bacterial communities. High bacterial heterogeneity was observed in the freshwater shrimp gut samples, and the result indicated that both the surrounding bacterial community and water quality factors (particularly dissolved oxygen and temperature) could affect the shrimp gut bacterial community. Despite the observed heterogeneity, 57 genera, constituting 38~99% of the total genera in each of the 40 shrimp gut samples, were identified as the main bacterial population in the gut of M. nipponense . In addition, a high diversity and abundance of lactic acid bacteria (26 genera), which could play significant roles in the digestion process in shrimp, were observed in the shrimp gut samples. Overall, this study provides insights into the gut bacterial communities of freshwater shrimp and basic information for shrimp farming regarding the application of probiotics and disease prevention.

CD4+ lymphocytes control gut epithelial apoptosis and mediate survival in sepsis.

PubMed

Stromberg, Paul E; Woolsey, Cheryl A; Clark, Andrew T; Clark, Jessica A; Turnbull, Isaiah R; McConnell, Kevin W; Chang, Katherine C; Chung, Chun-Shiang; Ayala, Alfred; Buchman, Timothy G; Hotchkiss, Richard S; Coopersmith, Craig M

2009-06-01

Lymphocytes help determine whether gut epithelial cells proliferate or differentiate but are not known to affect whether they live or die. Here, we report that lymphocytes play a controlling role in mediating gut epithelial apoptosis in sepsis but not under basal conditions. Gut epithelial apoptosis is similar in unmanipulated Rag-1(-/-) and wild-type (WT) mice. However, Rag-1(-/-) animals have a 5-fold augmentation in gut epithelial apoptosis following cecal ligation and puncture (CLP) compared to septic WT mice. Reconstitution of lymphocytes in Rag-1(-/-) mice via adoptive transfer decreases intestinal apoptosis to levels seen in WT animals. Subset analysis indicates that CD4(+) but not CD8(+), gammadelta, or B cells are responsible for the antiapoptotic effect of lymphocytes on the gut epithelium. Gut-specific overexpression of Bcl-2 in transgenic mice decreases mortality following CLP. This survival benefit is lymphocyte dependent since gut-specific overexpression of Bcl-2 fails to alter survival when the transgene is overexpressed in Rag-1(-/-) mice. Further, adoptively transferring lymphocytes to Rag-1(-/-) mice that simultaneously overexpress gut-specific Bcl-2 results in improved mortality following sepsis. Thus, sepsis unmasks CD4(+) lymphocyte control of gut apoptosis that is not present under homeostatic conditions, which acts as a key determinant of both cellular survival and host mortality.

Fish gut-liver immunity during homeostasis or inflammation revealed by integrative transcriptome and proteome studies

NASA Astrophysics Data System (ADS)

Wu, Nan; Song, Yu-Long; Wang, Bei; Zhang, Xiang-Yang; Zhang, Xu-Jie; Wang, Ya-Li; Cheng, Ying-Yin; Chen, Dan-Dan; Xia, Xiao-Qin; Lu, Yi-Shan; Zhang, Yong-An

2016-11-01

The gut-associated lymphoid tissue, connected with liver via bile and blood, constructs a local immune environment of both defense and tolerance. The gut-liver immunity has been well-studied in mammals, yet in fish remains largely unknown, even though enteritis as well as liver and gallbladder syndrome emerged as a limitation in aquaculture. In this study, we performed integrative bioinformatic analysis for both transcriptomic (gut and liver) and proteomic (intestinal mucus and bile) data, in both healthy and infected tilapias. We found more categories of immune transcripts in gut than liver, as well as more adaptive immune in gut meanwhile more innate in liver. Interestingly reduced differential immune transcripts between gut and liver upon inflammation were also revealed. In addition, more immune proteins in bile than intestinal mucus were identified. And bile probably providing immune effectors to intestinal mucus upon inflammation was deduced. Specifically, many key immune transcripts in gut or liver as well as key immune proteins in mucus or bile were demonstrated. Accordingly, we proposed a hypothesized profile of fish gut-liver immunity, during either homeostasis or inflammation. Current data suggested that fish gut and liver may collaborate immunologically while keep homeostasis using own strategies, including potential unique mechanisms.

Targeting gut microbiome: A novel and potential therapy for autism.

PubMed

Yang, Yongshou; Tian, Jinhu; Yang, Bo

2018-02-01

Autism spectrum disorder (ASD) is a severely neurodevelopmental disorder that impairs a child's ability to communicate and interact with others. Children with neurodevelopmental disorder, including ASD, are regularly affected by gastrointestinal problems and dysbiosis of gut microbiota. On the other hand, humans live in a co-evolutionary association with plenty of microorganisms that resident on the exposed and internal surfaces of our bodies. The microbiome, refers to the collection of microbes and their genetic material, confers a variety of physiologic benefits to the host in many key aspects of life as well as being responsible for some diseases. A large body of preclinical literature indicates that gut microbiome plays an important role in the bidirectional gut-brain axis that communicates between the gut and central nervous system. Moreover, accumulating evidences suggest that the gut microbiome is involved in the pathogenesis of ASD. The present review introduces the increasing evidence suggesting the reciprocal interaction network among microbiome, gut and brain. It also discusses the possible mechanisms by which gut microbiome influences the etiology of ASD via altering gut-brain axis. Most importantly, it highlights the new findings of targeting gut microbiome, including probiotic treatment and fecal microbiota transplant, as novel and potential therapeutics for ASD diseases. Copyright © 2017 Elsevier Inc. All rights reserved.

The role of gut microbiota in health and disease: In vitro modeling of host-microbe interactions at the aerobe-anaerobe interphase of the human gut.

PubMed

von Martels, Julius Z H; Sadaghian Sadabad, Mehdi; Bourgonje, Arno R; Blokzijl, Tjasso; Dijkstra, Gerard; Faber, Klaas Nico; Harmsen, Hermie J M

2017-04-01

The microbiota of the gut has many crucial functions in human health. Dysbiosis of the microbiota has been correlated to a large and still increasing number of diseases. Recent studies have mostly focused on analyzing the associations between disease and an aberrant microbiota composition. Functional studies using (in vitro) gut models are required to investigate the precise interactions that occur between specific bacteria (or bacterial mixtures) and gut epithelial cells. As most gut bacteria are obligate or facultative anaerobes, studying their effect on oxygen-requiring human gut epithelial cells is technically challenging. Still, several (anaerobic) bacterial-epithelial co-culture systems have recently been developed that mimic host-microbe interactions occurring in the human gut, including 1) the Transwell "apical anaerobic model of the intestinal epithelial barrier", 2) the Host-Microbiota Interaction (HMI) module, 3) the "Human oxygen-Bacteria anaerobic" (HoxBan) system, 4) the human gut-on-a-chip and 5) the HuMiX model. This review discusses the role of gut microbiota in health and disease and gives an overview of the characteristics and applications of these novel host-microbe co-culture systems. Copyright © 2017 Elsevier Ltd. All rights reserved.

Diet, Environments, and Gut Microbiota. A Preliminary Investigation in Children Living in Rural and Urban Burkina Faso and Italy.

PubMed

De Filippo, Carlotta; Di Paola, Monica; Ramazzotti, Matteo; Albanese, Davide; Pieraccini, Giuseppe; Banci, Elena; Miglietta, Franco; Cavalieri, Duccio; Lionetti, Paolo

2017-01-01

Diet is one of the main factors that affects the composition of gut microbiota. When people move from a rural environment to urban areas, and experience improved socio-economic conditions, they are often exposed to a "globalized" Western type diet. Here, we present preliminary observations on the metagenomic scale of microbial changes in small groups of African children belonging to the same ethnicity and living in different environments, compared to children living on the urban area of Florence (Italy). We analyzed dietary habits and, by pyrosequencing of the 16S rRNA gene, gut microbiota profiles from fecal samples of children living in a rural village of Burkina Faso ( n = 11), of two groups of children living in different urban settings (Nanoro town, n = 8; Ouagadougou, the capital city, n = 5) and of a group of Italian children ( n = 13). We observed that when foods of animal origin, those rich in fat and simple sugars are introduced into a traditional African diet, composed of cereals, legumes and vegetables, the gut microbiota profiles changes. Microbiota of rural children retain a geographically unique bacterial reservoir ( Prevotella , Treponema , and Succinivibrio ), assigned to ferment fiber and polysaccharides from vegetables. Independently of geography and ethnicity, in children living in urban areas these bacterial genera were progressively outcompeted by bacteria more suited to the metabolism of animal protein, fat and sugar rich foods, similarly to Italian children, as resulted by PICRUSt (Phylogenetic Investigation of Communities by Reconstruction of Unobserved States), a predictive functional profiling of microbial communities using 16S rRNA marker gene. Consequently, we observed a progressive reduction of SCFAs measured by gas chromatography-mass spectrometry, in urban populations, especially in Italian children, respect to rural ones. Our results even if in a limited number of individuals point out that dietary habit modifications in the course of urbanization play a role in shaping gut microbiota, and that ancient microorganisms, such as fiber-degrading bacteria, are at risk of being eliminated by the fast paced globalization of foods and by the advent of westernized lifestyle.

Fermented Milk Containing Lactobacillus casei Strain Shirota Preserves the Diversity of the Gut Microbiota and Relieves Abdominal Dysfunction in Healthy Medical Students Exposed to Academic Stress.

PubMed

Kato-Kataoka, Akito; Nishida, Kensei; Takada, Mai; Kawai, Mitsuhisa; Kikuchi-Hayakawa, Hiroko; Suda, Kazunori; Ishikawa, Hiroshi; Gondo, Yusuke; Shimizu, Kensuke; Matsuki, Takahiro; Kushiro, Akira; Hoshi, Ryoutaro; Watanabe, Osamu; Igarashi, Tomoki; Miyazaki, Kouji; Kuwano, Yuki; Rokutan, Kazuhito

2016-06-15

Stress-induced abdominal dysfunction is an attractive target for probiotics. To investigate the effects of the probiotic Lactobacillus casei strain Shirota on abdominal dysfunction, a double-blind, placebo-controlled trial was conducted with healthy medical students undertaking an authorized nationwide examination for academic advancement. For 8 weeks, until the day before the examination, 23 and 24 subjects consumed an L. casei strain Shirota-fermented milk and a placebo milk daily, respectively. In addition to assessments of abdominal symptoms, psychophysical state, and salivary stress markers, gene expression changes in peripheral blood leukocytes and composition of the gut microbiota were analyzed using DNA microarray analysis and 16S rRNA gene amplicon sequence analysis, respectively, before and after the intervention. Stress-induced increases in a visual analog scale measuring feelings of stress, the total score of abdominal dysfunction, and the number of genes with changes in expression of more than 2-fold in leukocytes were significantly suppressed in the L. casei strain Shirota group compared with those in the placebo group. A significant increase in salivary cortisol levels before the examination was observed only in the placebo group. The administration of L. casei strain Shirota, but not placebo, significantly reduced gastrointestinal symptoms. Moreover, 16S rRNA gene amplicon sequencing demonstrated that the L. casei strain Shirota group had significantly higher numbers of species, a marker of the alpha-diversity index, in their gut microbiota and a significantly lower percentage of Bacteroidaceae than the placebo group. Our findings indicate that the daily consumption of probiotics, such as L. casei strain Shirota, preserves the diversity of the gut microbiota and may relieve stress-associated responses of abdominal dysfunction in healthy subjects exposed to stressful situations. A novel clinical trial was conducted with healthy medical students under examination stress conditions. It was demonstrated that the daily consumption of lactic acid bacteria provided health benefits to prevent the onset of stress-associated abdominal symptoms and a good change of gut microbiota in healthy medical students. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

Seasonal, spatial, and maternal effects on gut microbiome in wild red squirrels.

PubMed

Ren, Tiantian; Boutin, Stan; Humphries, Murray M; Dantzer, Ben; Gorrell, Jamieson C; Coltman, David W; McAdam, Andrew G; Wu, Martin

2017-12-21

Our understanding of gut microbiota has been limited primarily to findings from human and laboratory animals, but what shapes the gut microbiota in nature remains largely unknown. To fill this gap, we conducted a comprehensive study of gut microbiota of a well-studied North American red squirrel (Tamiasciurus hudsonicus) population. Red squirrels are territorial, solitary, and live in a highly seasonal environment and therefore represent a very attractive system to study factors that drive the temporal and spatial dynamics of gut microbiota. For the first time, this study revealed significant spatial patterns of gut microbiota within a host population, suggesting limited dispersal could play a role in shaping and maintaining the structure of gut microbial communities. We also found a remarkable seasonal rhythm in red squirrel's gut microbial composition manifested by a tradeoff between relative abundance of two genera Oscillospira and Corpococcus and clearly associated with seasonal variation in diet availability. Our results show that in nature, environmental factors exert a much stronger influence on gut microbiota than host-associated factors including age and sex. Despite strong environmental effects, we found clear evidence of individuality and maternal effects, but host genetics did not seem to be a significant driver of the gut microbial communities in red squirrels. Taken together, the results of this study emphasize the importance of external ecological factors rather than host attributes in driving temporal and spatial patterns of gut microbiota in natural environment.

The Potential Link between Gut Microbiota and IgE-Mediated Food Allergy in Early Life

PubMed Central

Molloy, John; Allen, Katrina; Collier, Fiona; Tang, Mimi L. K.; Ward, Alister C.; Vuillermin, Peter

2013-01-01

There has been a dramatic rise in the prevalence of IgE-mediated food allergy over recent decades, particularly among infants and young children. The cause of this increase is unknown but one putative factor is a change in the composition, richness and balance of the microbiota that colonize the human gut during early infancy. The coevolution of the human gastrointestinal tract and commensal microbiota has resulted in a symbiotic relationship in which gut microbiota play a vital role in early life immune development and function, as well as maintenance of gut wall epithelial integrity. Since IgE mediated food allergy is associated with immune dysregulation and impaired gut epithelial integrity there is substantial interest in the potential link between gut microbiota and food allergy. Although the exact link between gut microbiota and food allergy is yet to be established in humans, recent experimental evidence suggests that specific patterns of gut microbiota colonization may influence the risk and manifestations of food allergy. An understanding of the relationship between gut microbiota and food allergy has the potential to inform both the prevention and treatment of food allergy. In this paper we review the theory and evidence linking gut microbiota and IgE-mediated food allergy in early life. We then consider the implications and challenges for future research, including the techniques of measuring and analyzing gut microbiota, and the types of studies required to advance knowledge in the field. PMID:24351744

Factors influencing the grass carp gut microbiome and its effect on metabolism.

PubMed

Ni, Jiajia; Yan, Qingyun; Yu, Yuhe; Zhang, Tanglin

2014-03-01

Gut microbiota have attracted extensive attention recently because of their important role in host metabolism, immunity and health maintenance. The present study focused on factors affecting the gut microbiome of grass carp (Ctenopharyngodon idella) and further explored the potential effect of the gut microbiome on metabolism. Totally, 43.39 Gb of screened metagenomic sequences obtained from 24 gut samples were fully analysed. We detected 1228 phylotypes (116 Archaea and 1112 Bacteria), most of which belonged to the phyla Firmicutes, Proteobacteria and Fusobacteria. Totally, 41335 of the detected open reading frames (ORFs) were matched to Kyoto Encyclopedia of Genes and Genomes pathways, and carbohydrate and amino acid metabolism was the main matched pathway deduced from the annotated ORFs. Redundancy analysis based on the phylogenetic composition and gene composition of the gut microbiome indicated that gut fullness and feeding (i.e. ryegrass vs. commercial feed, and pond-cultured vs. wild) were significantly related to the gut microbiome. Moreover, many biosynthesis and metabolism pathways of carbohydrates, amino acids and lipids were significantly enhanced by the gut microbiome in ryegrass-fed grass carp. These findings suggest that the metabolic role played by the gut microbiome in grass carp can be affected by feeding. These findings contribute to the field of fish gut microbial ecology and also provide a basis for follow-up functional studies. © 2013 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

The gut-kidney axis in chronic renal failure: A new potential target for therapy.

PubMed

Khoury, Tawfik; Tzukert, Keren; Abel, Roy; Abu Rmeileh, Ayman; Levi, Ronen; Ilan, Yaron

2017-07-01

Evidence is accumulating to consider the gut microbiome as a central player in the gut-kidney axis. Microbiome products, such as advanced glycation end products, phenols, and indoles, are absorbed into the circulation but are cleared by normal-functioning kidneys. These products then become toxic and contribute to the uremic load and to the progression of chronic kidney failure. In this review, we discuss the gut-kidney interaction under the state of chronic kidney failure as well as the potential mechanisms by which a change in the gut flora (termed gut dysbiosis) in chronic kidney disease (CKD) exacerbates uremia and leads to further progression of CKD and inflammation. Finally, the potential therapeutic interventions to target the gut microbiome in CKD are discussed. © 2016 International Society for Hemodialysis.

Bacterial-modulated host immunity and stem cell activation for gut homeostasis.

PubMed

Lee, Won-Jae

2009-10-01

Although it is widely accepted that dynamic cross-talk between gut epithelia and microorganisms must occur to achieve gut homeostasis, the critical mechanisms by which gut-microbe interactions are regulated remain uncertain. In this issue of Genes & Development, Buchon and colleagues (pp. 2333-2344) revealed that the reaction of the gut to microorganisms is not restricted to activating immune systems, but extends to integrated responses essential for gut tissue homeostasis, including self-renewal and the differentiation of stem cells. Further investigation of the connection between immune response and stem cell regulation at the molecular level in the microbe-laden mucosal epithelia will accelerate our understanding of the regulatory mechanisms of gut homeostasis and of the pathogenesis of diseases such as chronic inflammatory diseases and colorectal cancers.

Impacts of Gut Bacteria on Human Health and Diseases

PubMed Central

Zhang, Yu-Jie; Li, Sha; Gan, Ren-You; Zhou, Tong; Xu, Dong-Ping; Li, Hua-Bin

2015-01-01

Gut bacteria are an important component of the microbiota ecosystem in the human gut, which is colonized by 1014 microbes, ten times more than the human cells. Gut bacteria play an important role in human health, such as supplying essential nutrients, synthesizing vitamin K, aiding in the digestion of cellulose, and promoting angiogenesis and enteric nerve function. However, they can also be potentially harmful due to the change of their composition when the gut ecosystem undergoes abnormal changes in the light of the use of antibiotics, illness, stress, aging, bad dietary habits, and lifestyle. Dysbiosis of the gut bacteria communities can cause many chronic diseases, such as inflammatory bowel disease, obesity, cancer, and autism. This review summarizes and discusses the roles and potential mechanisms of gut bacteria in human health and diseases. PMID:25849657

Molecular Insight into Gut Microbiota and Rheumatoid Arthritis.

PubMed

Wu, Xiaohao; He, Bing; Liu, Jin; Feng, Hui; Ma, Yinghui; Li, Defang; Guo, Baosheng; Liang, Chao; Dang, Lei; Wang, Luyao; Tian, Jing; Zhu, Hailong; Xiao, Lianbo; Lu, Cheng; Lu, Aiping; Zhang, Ge

2016-03-22

Rheumatoid arthritis (RA) is a systemic, inflammatory, and autoimmune disorder. Gut microbiota play an important role in the etiology of RA. With the considerable progress made in next-generation sequencing techniques, the identified gut microbiota difference between RA patients and healthy individuals provides an updated overview of the association between gut microbiota and RA. We reviewed the reported correlation and underlying molecular mechanisms among gut microbiota, the immune system, and RA. It has become known that gut microbiota contribute to the pathogenesis of RA via multiple molecular mechanisms. The progressive understanding of the dynamic interaction between gut microbiota and their host will help in establishing a highly individualized management for each RA patient, and achieve a better efficacy in clinical practice, or even discovering new drugs for RA.

Analysis of gut microbial regulation of host gene expression along the length of the gut and regulation of gut microbial ecology through MyD88.

PubMed

Larsson, Erik; Tremaroli, Valentina; Lee, Ying Shiuan; Koren, Omry; Nookaew, Intawat; Fricker, Ashwana; Nielsen, Jens; Ley, Ruth E; Bäckhed, Fredrik

2012-08-01

The gut microbiota has profound effects on host physiology but local host-microbial interactions in the gut are only poorly characterised and are likely to vary from the sparsely colonised duodenum to the densely colonised colon. Microorganisms are recognised by pattern recognition receptors such as Toll-like receptors, which signal through the adaptor molecule MyD88. To identify host responses induced by gut microbiota along the length of the gut and whether these required MyD88, transcriptional profiles of duodenum, jejunum, ileum and colon were compared from germ-free and conventionally raised wild-type and Myd88-/- mice. The gut microbial ecology was assessed by 454-based pyrosequencing and viruses were analysed by PCR. The gut microbiota modulated the expression of a large set of genes in the small intestine and fewer genes in the colon but surprisingly few microbiota-regulated genes required MyD88 signalling. However, MyD88 was essential for microbiota-induced colonic expression of the antimicrobial genes Reg3β and Reg3γ in the epithelium, and Myd88 deficiency was associated with both a shift in bacterial diversity and a greater proportion of segmented filamentous bacteria in the small intestine. In addition, conventionally raised Myd88-/- mice had increased expression of antiviral genes in the colon, which correlated with norovirus infection in the colonic epithelium. This study provides a detailed description of tissue-specific host transcriptional responses to the normal gut microbiota along the length of the gut and demonstrates that the absence of MyD88 alters gut microbial ecology.

Sex-Specific Effects of Organophosphate Diazinon on the Gut Microbiome and Its Metabolic Functions.

PubMed

Gao, Bei; Bian, Xiaoming; Mahbub, Ridwan; Lu, Kun

2017-02-01

There is growing recognition of the significance of the gut microbiome to human health, and the association between a perturbed gut microbiome with human diseases has been established. Previous studies also show the role of environmental toxicants in perturbing the gut microbiome and its metabolic functions. The wide agricultural use of diazinon, an organophosphate insecticide, has raised serious environmental health concerns since it is a potent neurotoxicant. With studies demonstrating the presence of a microbiome-gut-brain axis, it is possible that gut microbiome perturbation may also contribute to diazinon toxicity. We investigated the impact of diazinon exposure on the gut microbiome composition and its metabolic functions in C57BL/6 mice. We used a combination of 16S rRNA gene sequencing, metagenomics sequencing, and mass spectrometry-based metabolomics profiling in a mouse model to examine the functional impact of diazinon on the gut microbiome. 16S rRNA gene sequencing revealed that diazinon exposure significantly perturbed the gut microbiome, and metagenomic sequencing found that diazinon exposure altered the functional metagenome. Moreover, metabolomics profiling revealed an altered metabolic profile arising from exposure. Of particular significance, these changes were more pronounced for male mice than for female mice. Diazinon exposure perturbed the gut microbiome community structure, functional metagenome, and associated metabolic profiles in a sex-specific manner. These findings may provide novel insights regarding perturbations of the gut microbiome and its functions as a potential new mechanism contributing to diazinon neurotoxicity and, in particular, its sex-selective effects. Citation: Gao B, Bian X, Mahbub R, Lu K. 2017. Sex-specific effects of organophosphate diazinon on the gut microbiome and its metabolic functions. Environ Health Perspect 125:198-206; http://dx.doi.org/10.1289/EHP202.

Gut microbiota and host metabolism in liver cirrhosis

PubMed Central

Usami, Makoto; Miyoshi, Makoto; Yamashita, Hayato

2015-01-01

The gut microbiota has the capacity to produce a diverse range of compounds that play a major role in regulating the activity of distal organs and the liver is strategically positioned downstream of the gut. Gut microbiota linked compounds such as short chain fatty acids, bile acids, choline metabolites, indole derivatives, vitamins, polyamines, lipids, neurotransmitters and neuroactive compounds, and hypothalamic-pituitary-adrenal axis hormones have many biological functions. This review focuses on the gut microbiota and host metabolism in liver cirrhosis. Dysbiosis in liver cirrhosis causes serious complications, such as bacteremia and hepatic encephalopathy, accompanied by small intestinal bacterial overgrowth and increased intestinal permeability. Gut dysbiosis in cirrhosis and intervention with probiotics and synbiotics in a clinical setting is reviewed and evaluated. Recent studies have revealed the relationship between gut microbiota and host metabolism in chronic metabolic liver disease, especially, non-alcoholic fatty liver disease, alcoholic liver disease, and with the gut microbiota metabolic interactions in dysbiosis related metabolic diseases such as diabetes and obesity. Recently, our understanding of the relationship between the gut and liver and how this regulates systemic metabolic changes in liver cirrhosis has increased. The serum lipid levels of phospholipids, free fatty acids, polyunsaturated fatty acids, especially, eicosapentaenoic acid, arachidonic acid, and docosahexaenoic acid have significant correlations with specific fecal flora in liver cirrhosis. Many clinical and experimental reports support the relationship between fatty acid metabolism and gut-microbiota. Various blood metabolome such as cytokines, amino acids, and vitamins are correlated with gut microbiota in probiotics-treated liver cirrhosis patients. The future evaluation of the gut-microbiota-liver metabolic network and the intervention of these relationships using probiotics, synbiotics, and prebiotics, with sufficient nutrition could aid the development of treatments and prevention for liver cirrhosis patients. PMID:26556989

Gut microbiota and host metabolism in liver cirrhosis.

PubMed

Usami, Makoto; Miyoshi, Makoto; Yamashita, Hayato

2015-11-07

The gut microbiota has the capacity to produce a diverse range of compounds that play a major role in regulating the activity of distal organs and the liver is strategically positioned downstream of the gut. Gut microbiota linked compounds such as short chain fatty acids, bile acids, choline metabolites, indole derivatives, vitamins, polyamines, lipids, neurotransmitters and neuroactive compounds, and hypothalamic-pituitary-adrenal axis hormones have many biological functions. This review focuses on the gut microbiota and host metabolism in liver cirrhosis. Dysbiosis in liver cirrhosis causes serious complications, such as bacteremia and hepatic encephalopathy, accompanied by small intestinal bacterial overgrowth and increased intestinal permeability. Gut dysbiosis in cirrhosis and intervention with probiotics and synbiotics in a clinical setting is reviewed and evaluated. Recent studies have revealed the relationship between gut microbiota and host metabolism in chronic metabolic liver disease, especially, non-alcoholic fatty liver disease, alcoholic liver disease, and with the gut microbiota metabolic interactions in dysbiosis related metabolic diseases such as diabetes and obesity. Recently, our understanding of the relationship between the gut and liver and how this regulates systemic metabolic changes in liver cirrhosis has increased. The serum lipid levels of phospholipids, free fatty acids, polyunsaturated fatty acids, especially, eicosapentaenoic acid, arachidonic acid, and docosahexaenoic acid have significant correlations with specific fecal flora in liver cirrhosis. Many clinical and experimental reports support the relationship between fatty acid metabolism and gut-microbiota. Various blood metabolome such as cytokines, amino acids, and vitamins are correlated with gut microbiota in probiotics-treated liver cirrhosis patients. The future evaluation of the gut-microbiota-liver metabolic network and the intervention of these relationships using probiotics, synbiotics, and prebiotics, with sufficient nutrition could aid the development of treatments and prevention for liver cirrhosis patients.

The Presence of a Functionally Tripartite Through-Gut in Ctenophora Has Implications for Metazoan Character Trait Evolution.

PubMed

Presnell, Jason S; Vandepas, Lauren E; Warren, Kaitlyn J; Swalla, Billie J; Amemiya, Chris T; Browne, William E

2016-10-24

The current paradigm of gut evolution assumes that non-bilaterian metazoan lineages either lack a gut (Porifera and Placozoa) or have a sac-like gut (Ctenophora and Cnidaria) and that a through-gut originated within Bilateria [1-8]. An important group for understanding early metazoan evolution is Ctenophora (comb jellies), which diverged very early from the animal stem lineage [9-13]. The perception that ctenophores possess a sac-like blind gut with only one major opening remains a commonly held misconception [4, 5, 7, 14, 15]. Despite descriptions of the ctenophore digestive system dating to Agassiz [16] that identify two openings of the digestive system opposite of the mouth-called "excretory pores" by Chun [17], referred to as an "anus" by Main [18], and coined "anal pores" by Hyman [19]-contradictory reports, particularly prominent in recent literature, posit that waste products are primarily expelled via the mouth [4, 5, 7, 14, 19-23]. Here we demonstrate that ctenophores possess a unidirectional, functionally tripartite through-gut and provide an updated interpretation for the evolution of the metazoan through-gut. Our results resolve lingering questions regarding the functional anatomy of the ctenophore gut and long-standing misconceptions about waste removal in ctenophores. Moreover, our results present an intriguing evolutionary quandary that stands in stark contrast to the current paradigm of gut evolution: either (1) the through-gut has its origins very early in the metazoan stem lineage or (2) the ctenophore lineage has converged on an arrangement of organs functionally similar to the bilaterian through-gut. Copyright © 2016 Elsevier Ltd. All rights reserved.

Structure and function of the healthy pre-adolescent pediatric gut microbiome

USDA-ARS?s Scientific Manuscript database

The gut microbiome influences myriad host functions, including nutrient acquisition, immune modulation, brain development, and behavior. Although human gut microbiota are recognized to change as we age, information regarding the structure and function of the gut microbiome during childhood is limite...

The gut microbiota and the brain-gut-kidney axis in hypertension and chronic kidney disease.

PubMed

Yang, Tao; Richards, Elaine M; Pepine, Carl J; Raizada, Mohan K

2018-07-01

Crosstalk between the gut microbiota and the host has attracted considerable attention owing to its involvement in diverse diseases. Chronic kidney disease (CKD) is commonly associated with hypertension and is characterized by immune dysregulation, metabolic disorder and sympathetic activation, which are all linked to gut dysbiosis and altered host-microbiota crosstalk. In this Review, we discuss the complex interplay between the brain, the gut, the microbiota and the kidney in CKD and hypertension and explain our brain-gut-kidney axis hypothesis for the pathogenesis of these diseases. Consideration of the role of the brain-gut-kidney axis in the maintenance of normal homeostasis and of dysregulation of this axis in CKD and hypertension could lead to the identification of novel therapeutic targets. In addition, the discovery of unique microbial communities and their associated metabolites and the elucidation of brain-gut-kidney signalling are likely to fill fundamental knowledge gaps leading to innovative research, clinical trials and treatments for CKD and hypertension.

Mechanisms Linking the Gut Microbiome and Glucose Metabolism

PubMed Central

Kratz, Mario; Damman, Chris J.; Hullarg, Meredith

2016-01-01

Context: Type 2 diabetes mellitus is associated with gastrointestinal dysbiosis involving both compositional and functional changes in the gut microbiome. Changes in diet and supplementation with probiotics and prebiotics (ie, fermentable fibers) can induce favorable changes in gut bacterial species and improve glucose homeostasis. Objective: This paper will review the data supporting several potential mechanisms whereby gut dysbiosis contributes to metabolic dysfunction, including microbiota driven increases in systemic lipopolysaccharide concentrations, changes in bile acid metabolism, alterations in short chain fatty acid production, alterations in gut hormone secretion, and changes in circulating branched-chain amino acids. Methods: Data for this review were identified by searching English language references from PubMed and relevant articles. Conclusions: Understanding the mechanisms linking the gut microbiome to glucose metabolism, and the relevant compositional and functional characteristics of the gut microbiome, will help direct future research to develop more targeted approaches or novel compounds aimed at restoring a more healthy gut microbiome as a new approach to prevent and treat type 2 diabetes mellitus and related metabolic conditions. PMID:26938201

The influence of proton pump inhibitors and other commonly used medication on the gut microbiota.

PubMed

Imhann, Floris; Vich Vila, Arnau; Bonder, Marc Jan; Lopez Manosalva, Ailine G; Koonen, Debby P Y; Fu, Jingyuan; Wijmenga, Cisca; Zhernakova, Alexandra; Weersma, Rinse K

2017-07-04

Proton pump inhibitors (PPIs), used to treat gastro-esophageal reflux and prevent gastric ulcers, are among the most widely used drugs in the world. The use of PPIs is associated with an increased risk of enteric infections. Since the gut microbiota can, depending on composition, increase or decrease the risk of enteric infections, we investigated the effect of PPI-use on the gut microbiota. We discovered profound differences in the gut microbiota of PPI users: 20% of their bacterial taxa were statistically significantly altered compared with those of non-users. Moreover, we found that it is not only PPIs, but also antibiotics, antidepressants, statins and other commonly used medication were associated with distinct gut microbiota signatures. As a consequence, commonly used medications could affect how the gut microbiota resist enteric infections, promote or ameliorate gut inflammation, or change the host's metabolism. More studies are clearly needed to understand the role of commonly used medication in altering the gut microbiota as well as the subsequent health consequences.

Gut microbiota and metabolic syndrome.

PubMed

Festi, Davide; Schiumerini, Ramona; Eusebi, Leonardo Henry; Marasco, Giovanni; Taddia, Martina; Colecchia, Antonio

2014-11-21

Gut microbiota exerts a significant role in the pathogenesis of the metabolic syndrome, as confirmed by studies conducted both on humans and animal models. Gut microbial composition and functions are strongly influenced by diet. This complex intestinal "superorganism" seems to affect host metabolic balance modulating energy absorption, gut motility, appetite, glucose and lipid metabolism, as well as hepatic fatty storage. An impairment of the fine balance between gut microbes and host's immune system could culminate in the intestinal translocation of bacterial fragments and the development of "metabolic endotoxemia", leading to systemic inflammation and insulin resistance. Diet induced weight-loss and bariatric surgery promote significant changes of gut microbial composition, that seem to affect the success, or the inefficacy, of treatment strategies. Manipulation of gut microbiota through the administration of prebiotics or probiotics could reduce intestinal low grade inflammation and improve gut barrier integrity, thus, ameliorating metabolic balance and promoting weight loss. However, further evidence is needed to better understand their clinical impact and therapeutic use.

Impact of the gut microbiota on inflammation, obesity, and metabolic disease.

PubMed

Boulangé, Claire L; Neves, Ana Luisa; Chilloux, Julien; Nicholson, Jeremy K; Dumas, Marc-Emmanuel

2016-04-20

The human gut harbors more than 100 trillion microbial cells, which have an essential role in human metabolic regulation via their symbiotic interactions with the host. Altered gut microbial ecosystems have been associated with increased metabolic and immune disorders in animals and humans. Molecular interactions linking the gut microbiota with host energy metabolism, lipid accumulation, and immunity have also been identified. However, the exact mechanisms that link specific variations in the composition of the gut microbiota with the development of obesity and metabolic diseases in humans remain obscure owing to the complex etiology of these pathologies. In this review, we discuss current knowledge about the mechanistic interactions between the gut microbiota, host energy metabolism, and the host immune system in the context of obesity and metabolic disease, with a focus on the importance of the axis that links gut microbes and host metabolic inflammation. Finally, we discuss therapeutic approaches aimed at reshaping the gut microbial ecosystem to regulate obesity and related pathologies, as well as the challenges that remain in this area.

The "Gut Feeling": Breaking Down the Role of Gut Microbiome in Multiple Sclerosis.

PubMed

Freedman, Samantha N; Shahi, Shailesh K; Mangalam, Ashutosh K

2018-01-01

Multiple sclerosis (MS) is a chronic neuroinflammatory disease of the central nervous system with unknown etiology. Recently, the gut microbiota has emerged as a potential factor in the development of MS, with a number of studies having shown that patients with MS exhibit gut dysbiosis. The gut microbiota helps the host remain healthy by regulating various functions, including food metabolism, energy homeostasis, maintenance of the intestinal barrier, inhibition of colonization by pathogenic organisms, and shaping of both mucosal and systemic immune responses. Alteration of the gut microbiota, and subsequent changes in its metabolic network that perturb this homeostasis, may lead to intestinal and systemic disorders such as MS. Here we discuss the findings of recent MS microbiome studies and potential mechanisms through which gut microbiota can predispose to, or protect against, MS. These findings highlight the need of an improved understanding of the interactions between the microbiota and host for developing therapies based on gut commensals with which to treat MS.

Regulation of energy balance by a gut-brain axis and involvement of the gut microbiota.

PubMed

Bauer, Paige V; Hamr, Sophie C; Duca, Frank A

2016-02-01

Despite significant progress in understanding the homeostatic regulation of energy balance, successful therapeutic options for curbing obesity remain elusive. One potential target for the treatment of obesity is via manipulation of the gut-brain axis, a complex bidirectional communication system that is crucial in maintaining energy homeostasis. Indeed, ingested nutrients induce secretion of gut peptides that act either via paracrine signaling through vagal and non-vagal neuronal relays, or in an endocrine fashion via entry into circulation, to ultimately signal to the central nervous system where appropriate responses are generated. We review here the current hypotheses of nutrient sensing mechanisms of enteroendocrine cells, including the release of gut peptides, mainly cholecystokinin, glucagon-like peptide-1, and peptide YY, and subsequent gut-to-brain signaling pathways promoting a reduction of food intake and an increase in energy expenditure. Furthermore, this review highlights recent research suggesting this energy regulating gut-brain axis can be influenced by gut microbiota, potentially contributing to the development of obesity.

Ex vivo gut culture for studying differentiation and migration of small intestinal epithelial cells

PubMed Central

Fu, Xing; Du, Min

2018-01-01

Epithelial cultures are commonly used for studying gut health. However, due to the absence of mesenchymal cells and gut structure, epithelial culture systems including recently developed three-dimensional organoid culture cannot accurately represent in vivo gut development, which requires intense cross-regulation of the epithelial layer with the underlying mesenchymal tissue. In addition, organoid culture is costly. To overcome this, a new culture system was developed using mouse embryonic small intestine. Cultured intestine showed spontaneous peristalsis, indicating the maintenance of the normal gut physiological structure. During 10 days of ex vivo culture, epithelial cells moved along the gut surface and differentiated into different epithelial cell types, including enterocytes, Paneth cells, goblet cells and enteroendocrine cells. We further used the established ex vivo system to examine the role of AMP-activated protein kinase (AMPK) on gut epithelial health. Tamoxifen-induced AMPKα1 knockout vastly impaired epithelial migration and differentiation of the developing ex vivo gut, showing the crucial regulatory function of AMPK α1 in intestinal health. PMID:29643147

Gut microbiota and metabolic syndrome

PubMed Central

Festi, Davide; Schiumerini, Ramona; Eusebi, Leonardo Henry; Marasco, Giovanni; Taddia, Martina; Colecchia, Antonio

2014-01-01

Gut microbiota exerts a significant role in the pathogenesis of the metabolic syndrome, as confirmed by studies conducted both on humans and animal models. Gut microbial composition and functions are strongly influenced by diet. This complex intestinal “superorganism” seems to affect host metabolic balance modulating energy absorption, gut motility, appetite, glucose and lipid metabolism, as well as hepatic fatty storage. An impairment of the fine balance between gut microbes and host’s immune system could culminate in the intestinal translocation of bacterial fragments and the development of “metabolic endotoxemia”, leading to systemic inflammation and insulin resistance. Diet induced weight-loss and bariatric surgery promote significant changes of gut microbial composition, that seem to affect the success, or the inefficacy, of treatment strategies. Manipulation of gut microbiota through the administration of prebiotics or probiotics could reduce intestinal low grade inflammation and improve gut barrier integrity, thus, ameliorating metabolic balance and promoting weight loss. However, further evidence is needed to better understand their clinical impact and therapeutic use. PMID:25473159

Osborne Reynolds pipe flow: Direct simulation from laminar through gradual transition to fully developed turbulence.

PubMed

Wu, Xiaohua; Moin, Parviz; Adrian, Ronald J; Baltzer, Jon R

2015-06-30

The precise dynamics of breakdown in pipe transition is a century-old unresolved problem in fluid mechanics. We demonstrate that the abruptness and mysteriousness attributed to the Osborne Reynolds pipe transition can be partially resolved with a spatially developing direct simulation that carries weakly but finitely perturbed laminar inflow through gradual rather than abrupt transition arriving at the fully developed turbulent state. Our results with this approach show during transition the energy norms of such inlet perturbations grow exponentially rather than algebraically with axial distance. When inlet disturbance is located in the core region, helical vortex filaments evolve into large-scale reverse hairpin vortices. The interaction of these reverse hairpins among themselves or with the near-wall flow when they descend to the surface from the core produces small-scale hairpin packets, which leads to breakdown. When inlet disturbance is near the wall, certain quasi-spanwise structure is stretched into a Lambda vortex, and develops into a large-scale hairpin vortex. Small-scale hairpin packets emerge near the tip region of the large-scale hairpin vortex, and subsequently grow into a turbulent spot, which is itself a local concentration of small-scale hairpin vortices. This vortex dynamics is broadly analogous to that in the boundary layer bypass transition and in the secondary instability and breakdown stage of natural transition, suggesting the possibility of a partial unification. Under parabolic base flow the friction factor overshoots Moody's correlation. Plug base flow requires stronger inlet disturbance for transition. Accuracy of the results is demonstrated by comparing with analytical solutions before breakdown, and with fully developed turbulence measurements after the completion of transition.

Osborne Reynolds pipe flow: Direct simulation from laminar through gradual transition to fully developed turbulence

PubMed Central

Wu, Xiaohua; Moin, Parviz; Adrian, Ronald J.; Baltzer, Jon R.

2015-01-01

The precise dynamics of breakdown in pipe transition is a century-old unresolved problem in fluid mechanics. We demonstrate that the abruptness and mysteriousness attributed to the Osborne Reynolds pipe transition can be partially resolved with a spatially developing direct simulation that carries weakly but finitely perturbed laminar inflow through gradual rather than abrupt transition arriving at the fully developed turbulent state. Our results with this approach show during transition the energy norms of such inlet perturbations grow exponentially rather than algebraically with axial distance. When inlet disturbance is located in the core region, helical vortex filaments evolve into large-scale reverse hairpin vortices. The interaction of these reverse hairpins among themselves or with the near-wall flow when they descend to the surface from the core produces small-scale hairpin packets, which leads to breakdown. When inlet disturbance is near the wall, certain quasi-spanwise structure is stretched into a Lambda vortex, and develops into a large-scale hairpin vortex. Small-scale hairpin packets emerge near the tip region of the large-scale hairpin vortex, and subsequently grow into a turbulent spot, which is itself a local concentration of small-scale hairpin vortices. This vortex dynamics is broadly analogous to that in the boundary layer bypass transition and in the secondary instability and breakdown stage of natural transition, suggesting the possibility of a partial unification. Under parabolic base flow the friction factor overshoots Moody’s correlation. Plug base flow requires stronger inlet disturbance for transition. Accuracy of the results is demonstrated by comparing with analytical solutions before breakdown, and with fully developed turbulence measurements after the completion of transition. PMID:26080447

Osborne Reynolds pipe flow: Direct simulation from laminar through gradual transition to fully developed turbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wu, Xiaohua; Moin, Parviz; Adrian, Ronald J.

We report that the precise dynamics of breakdown in pipe transition is a century-old unresolved problem in fluid mechanics. We demonstrate that the abruptness and mysteriousness attributed to the Osborne Reynolds pipe transition can be partially resolved with a spatially developing direct simulation that carries weakly but finitely perturbed laminar inflow through gradual rather than abrupt transition arriving at the fully developed turbulent state. Our results with this approach show during transition the energy norms of such inlet perturbations grow exponentially rather than algebraically with axial distance. When inlet disturbance is located in the core region, helical vortex filaments evolvemore » into large-scale reverse hairpin vortices. The interaction of these reverse hairpins among themselves or with the near-wall flow when they descend to the surface from the core produces small-scale hairpin packets, which leads to breakdown. When inlet disturbance is near the wall, certain quasi-spanwise structure is stretched into a Lambda vortex, and develops into a large-scale hairpin vortex. Small-scale hairpin packets emerge near the tip region of the large-scale hairpin vortex, and subsequently grow into a turbulent spot, which is itself a local concentration of small-scale hairpin vortices. This vortex dynamics is broadly analogous to that in the boundary layer bypass transition and in the secondary instability and breakdown stage of natural transition, suggesting the possibility of a partial unification. Under parabolic base flow the friction factor overshoots Moody’s correlation. Plug base flow requires stronger inlet disturbance for transition. Finally, accuracy of the results is demonstrated by comparing with analytical solutions before breakdown, and with fully developed turbulence measurements after the completion of transition.« less

Osborne Reynolds pipe flow: Direct simulation from laminar through gradual transition to fully developed turbulence

DOE PAGES

Wu, Xiaohua; Moin, Parviz; Adrian, Ronald J.; ...

2015-06-15

We report that the precise dynamics of breakdown in pipe transition is a century-old unresolved problem in fluid mechanics. We demonstrate that the abruptness and mysteriousness attributed to the Osborne Reynolds pipe transition can be partially resolved with a spatially developing direct simulation that carries weakly but finitely perturbed laminar inflow through gradual rather than abrupt transition arriving at the fully developed turbulent state. Our results with this approach show during transition the energy norms of such inlet perturbations grow exponentially rather than algebraically with axial distance. When inlet disturbance is located in the core region, helical vortex filaments evolvemore » into large-scale reverse hairpin vortices. The interaction of these reverse hairpins among themselves or with the near-wall flow when they descend to the surface from the core produces small-scale hairpin packets, which leads to breakdown. When inlet disturbance is near the wall, certain quasi-spanwise structure is stretched into a Lambda vortex, and develops into a large-scale hairpin vortex. Small-scale hairpin packets emerge near the tip region of the large-scale hairpin vortex, and subsequently grow into a turbulent spot, which is itself a local concentration of small-scale hairpin vortices. This vortex dynamics is broadly analogous to that in the boundary layer bypass transition and in the secondary instability and breakdown stage of natural transition, suggesting the possibility of a partial unification. Under parabolic base flow the friction factor overshoots Moody’s correlation. Plug base flow requires stronger inlet disturbance for transition. Finally, accuracy of the results is demonstrated by comparing with analytical solutions before breakdown, and with fully developed turbulence measurements after the completion of transition.« less

Redefining the gut as the motor of critical illness

PubMed Central

Mittal, Rohit; Coopersmith, Craig M.

2013-01-01

The gut is hypothesized to play a central role in the progression of sepsis and multiple organ dysfunction syndrome. Critical illness alters gut integrity by increasing epithelial apoptosis and permeability and by decreasing epithelial proliferation and mucus integrity. Additionally, toxic gut-derived lymph induces distant organ injury. Although the endogenous microflora ordinarily exist in a symbiotic relationship with the gut epithelium, severe physiologic insults alter this relationship, leading to induction of virulence factors in the microbiome, which, in turn, can perpetuate or worsen critical illness. This review highlights newly discovered ways in which the gut acts as the motor that perpetuates the systemic inflammatory response in critical illness. PMID:24055446

Bayesian naturalness, simplicity, and testability applied to the B ‑ L MSSM GUT

NASA Astrophysics Data System (ADS)

Fundira, Panashe; Purves, Austin

2018-04-01

Recent years have seen increased use of Bayesian model comparison to quantify notions such as naturalness, simplicity, and testability, especially in the area of supersymmetric model building. After demonstrating that Bayesian model comparison can resolve a paradox that has been raised in the literature concerning the naturalness of the proton mass, we apply Bayesian model comparison to GUTs, an area to which it has not been applied before. We find that the GUTs are substantially favored over the nonunifying puzzle model. Of the GUTs we consider, the B ‑ L MSSM GUT is the most favored, but the MSSM GUT is almost equally favored.

GOCE User Toolbox and Tutorial

NASA Astrophysics Data System (ADS)

Knudsen, P.; Benveniste, J.

2011-07-01

The GOCE User Toolbox GUT is a compilation of tools for the utilisation and analysis of GOCE Level 2 products. GUT support applications in Geodesy, Oceanography and Solid Earth Physics. The GUT Tutorial provides information and guidance in how to use the toolbox for a variety of applications. GUT consists of a series of advanced computer routines that carry out the required computations. It may be used on Windows PCs, UNIX/Linux Workstations, and Mac. The toolbox is supported by The GUT Algorithm Description and User Guide and The GUT Install Guide. A set of a-priori data and models are made available as well. GUT has been developed in a collaboration within the GUT Core Group. The GUT Core Group: S. Dinardo, D. Serpe, B.M. Lucas, R. Floberghagen, A. Horvath (ESA), O. Andersen, M. Herceg (DTU), M.-H. Rio, S. Mulet, G. Larnicol (CLS), J. Johannessen, L.Bertino (NERSC), H. Snaith, P. Challenor (NOC), K. Haines, D. Bretherton (NCEO), C. Hughes (POL), R.J. Bingham (NU), G. Balmino, S. Niemeijer, I. Price, L. Cornejo (S&T), M. Diament, I Panet (IPGP), C.C. Tscherning (KU), D. Stammer, F. Siegismund (UH), T. Gruber (TUM),

Gut Microbiota as a Therapeutic Target for Metabolic Disorders.

PubMed

Okubo, Hirofumi; Nakatsu, Yusuke; Kushiyama, Akifumi; Yamamotoya, Takeshi; Matsunaga, Yasuka; Inoue, Masa-Ki; Fujishiro, Midori; Sakoda, Hideaki; Ohno, Haruya; Yoneda, Masayasu; Ono, Hiraku; Asano, Tomoichiro

2018-01-01

Gut microbiota play a vital role not only in the digestion and absorption of nutrients, but also in homeostatic maintenance of host immunity, metabolism and the gut barrier. Recent evidence suggests that gut microbiota alterations contribute to the pathogenesis of metabolic disorders. In this review, we discuss the association between the gut microbiota and metabolic disorders, such as obesity, type 2 diabetes mellitus and non-alcoholic fatty liver disease, and the contribution of relevant modulating interventions, focusing on recent human studies. Several studies have identified potential causal associations between gut microbiota and metabolic disorders, as well as the underlying mechanisms. The effects of modulating interventions, such as prebiotics, probiotics, fecal microbiota transplantation, and other new treatment possibilities on these metabolic disorders have also been reported. A growing body of evidence highlights the role of gut microbiota in the development of dysbiosis, which in turn influences host metabolism and disease phenotypes. Further studies are required to elucidate the precise mechanisms by which gut microbiota-derived mediators induce metabolic disorders and modulating interventions exert their beneficial effects in humans. The gut microbiota represents a novel potential therapeutic target for a range of metabolic disorders. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

The intriguing role of Rifaximin in gut barrier chronic inflammation and in the treatment of Crohn's disease.

PubMed

Lopetuso, Loris R; Napoli, Marco; Rizzatti, Gianenrico; Gasbarrini, Antonio

2018-06-04

The gastrointestinal tract acts as a functional unit organized as a semipermeable multilayer system, in which commensal gut microbiota represents the anatomical barrier. Recently,, several studies have highlighted the involvement of gut microbiota in IBD pathogenesis, in sustaining gut barrier chronic inflammation, and in conditioning disease course and therapeutical response. This evidence provides a rationale for treating patients with gut microbiota modifiers. Among these, Rifaximin represents a non-traditional antibiotic able to act as a "eubiotic" on intestinal barrier. Area covered: The purpose of this narrative review is to explore the impact of Rifaximin on gut barrier and gut microbiota in IBD, in particular in Crohn's disease, and to analyze its potential therapeutic applications. Expert opinion: The possibility of a beneficial activity of Rifaximin in chronic intestinal inflammation and Crohn's disease has been debated and evaluated with different studies having obtained promising but still preliminary data. Larger trials are therefore needed. This gut-specific antibiotic could represent an alternative to systemic antibiotics thanks to its favorable safety profile and promising efficacy data. Rifaximin could exert, when appropriate, a synergic effect with immunomodulators in IBD, acting on both the microbial and immunological sides of gut barrier impairment.

New insights into the gut as the driver of critical illness and organ failure.

PubMed

Meng, Mei; Klingensmith, Nathan J; Coopersmith, Craig M

2017-04-01

The gut has long been hypothesized to be the 'motor' of multiple organ dysfunction syndrome. This review serves as an update on new data elucidating the role of the gut as the propagator of organ failure in critical illness. Under basal conditions, the gut absorbs nutrients and serves as a barrier that prevents approximately 40 trillion intraluminal microbes and their products from causing host injury. However, in critical illness, gut integrity is disrupted with hyperpermeability and increased epithelial apoptosis, allowing contamination of extraluminal sites that are ordinarily sterile. These alterations in gut integrity are further exacerbated in the setting of preexisting comorbidities. The normally commensal microflora is also altered in critical illness, with increases in microbial virulence and decreases in diversity, which leads to further pathologic responses within the host. All components of the gut are adversely impacted by critical illness. Gut injury can not only propagate local damage, but can also cause distant injury and organ failure. Understanding how the multifaceted components of the gut interact and how these are perturbed in critical illness may play an important role in turning off the 'motor' of multiple organ dysfunction syndrome in the future.

Modulatory Effects of Gut Microbiota on the Central Nervous System: How Gut Could Play a Role in Neuropsychiatric Health and Diseases.

PubMed

Yarandi, Shadi S; Peterson, Daniel A; Treisman, Glen J; Moran, Timothy H; Pasricha, Pankaj J

2016-04-30

Gut microbiome is an integral part of the Gut-Brain axis. It is becoming increasingly recognized that the presence of a healthy and diverse gut microbiota is important to normal cognitive and emotional processing. It was known that altered emotional state and chronic stress can change the composition of gut microbiome, but it is becoming more evident that interaction between gut microbiome and central nervous system is bidirectional. Alteration in the composition of the gut microbiome can potentially lead to increased intestinal permeability and impair the function of the intestinal barrier. Subsequently, neuro-active compounds and metabolites can gain access to the areas within the central nervous system that regulate cognition and emotional responses. Deregulated inflammatory response, promoted by harmful microbiota, can activate the vagal system and impact neuropsychological functions. Some bacteria can produce peptides or short chain fatty acids that can affect gene expression and inflammation within the central nervous system. In this review, we summarize the evidence supporting the role of gut microbiota in modulating neuropsychological functions of the central nervous system and exploring the potential underlying mechanisms.