Sample records for universal generating function

  1. Characterizing Cyclostationary Features of Digital Modulated Signals with Empirical Measurements using Spectral Correlation Function

    DTIC Science & Technology

    2011-06-01

    USING SPECTRAL CORRELATION FUNCTION THESIS Mujun Song, Captain, ROKA AFIT/GCE/ENG/11-09 DEPARTMENT OF THE AIR FORCE AIR UNIVERSITY AIR...Management Air Force Institute of Technology Air University Air Education and Training Command In Partial Fulfillment of the Requirements for the...generator, Agilent E4438C, ESG Vector Signal Generator. Universal Software Radio Peripheral 2 (USRP2), which is a Software Defined Radio (SDR), is used

  2. First-generation students' underperformance at university: the impact of the function of selection.

    PubMed

    Jury, Mickaël; Smeding, Annique; Darnon, Céline

    2015-01-01

    According to recent research, university not only has the role to educate and train students, it also has the role to select the best students. We argue that this function of selection disadvantages first-generation students, in comparison with continuing-generation students. Thus, the mere activation of the function of selection should be sufficient to produce achievement differences between first-generation and continuing-generation students in a novel academic task. Furthermore, we propose that when the function of selection is salient, first-generation students would be more vigilant to a cue that may confirm their inferiority, which should explain their underperformance. In the present experiment, participants were asked to complete an arithmetic modular task under two conditions, which either made the function of selection salient or reduced its importance. Participants' vigilance to a threatening cue (i.e., their performance relative to others) was measured through an eye-tracking technique. The results confirmed that first-generation students performed more poorly compared to continuing-generation students only when the function of selection was salient while no differences appeared in the no-selection condition. Regarding vigilance, the results did not confirm our hypothesis; thus, mediation path could not be tested. However, results indicated that at a high level of initial performance, first-generation students looked more often at the threatening cue. In others words, these students seemed more concerned about whether they were performing more poorly than others compared to their continuing-generation counterparts. Some methodological issues are discussed, notably regarding the measure of vigilance.

  3. First-generation students’ underperformance at university: the impact of the function of selection

    PubMed Central

    Jury, Mickaël; Smeding, Annique; Darnon, Céline

    2015-01-01

    According to recent research, university not only has the role to educate and train students, it also has the role to select the best students. We argue that this function of selection disadvantages first-generation students, in comparison with continuing-generation students. Thus, the mere activation of the function of selection should be sufficient to produce achievement differences between first-generation and continuing-generation students in a novel academic task. Furthermore, we propose that when the function of selection is salient, first-generation students would be more vigilant to a cue that may confirm their inferiority, which should explain their underperformance. In the present experiment, participants were asked to complete an arithmetic modular task under two conditions, which either made the function of selection salient or reduced its importance. Participants’ vigilance to a threatening cue (i.e., their performance relative to others) was measured through an eye-tracking technique. The results confirmed that first-generation students performed more poorly compared to continuing-generation students only when the function of selection was salient while no differences appeared in the no-selection condition. Regarding vigilance, the results did not confirm our hypothesis; thus, mediation path could not be tested. However, results indicated that at a high level of initial performance, first-generation students looked more often at the threatening cue. In others words, these students seemed more concerned about whether they were performing more poorly than others compared to their continuing-generation counterparts. Some methodological issues are discussed, notably regarding the measure of vigilance. PMID:26074854

  4. Generativity in College Students: Comparing and Explaining the Impact of Mentoring

    ERIC Educational Resources Information Center

    Hastings, Lindsay J.; Griesen, James V.; Hoover, Richard E.; Creswell, John W.; Dlugosh, Larry L.

    2015-01-01

    Preparing college students to be active contributors to the next generation is an important function of higher education. This assumption about generativity forms a cornerstone in this mixed methods study that examined generativity levels among 273 college students at a 4-year public university. MANCOVA results indicated that college students who…

  5. Ontario Universities Statistical Compendium, 1970-71 to 1978-79. Part A, Macro-Indicators.

    ERIC Educational Resources Information Center

    Council of Ontario Universities, Toronto.

    Macro-indicators on the conditions of Ontario universities and supporting data that might be used to generate such indicators were developed, and analyses of both indicators and data were undertaken. Overall objectives were as follows: (1) to measure the real resources available to the Ontario university system as a function of the volume of…

  6. Universal portfolios generated by the Bregman divergence

    NASA Astrophysics Data System (ADS)

    Tan, Choon Peng; Kuang, Kee Seng

    2017-04-01

    The Bregman divergence of two probability vectors is a stronger form of the f-divergence introduced by Csiszar. Two versions of the Bregman universal portfolio are presented by exploiting the mean-value theorem. The explicit form of the Bregman universal portfolio generated by a function of a convex polynomial is derived and studied empirically. This portfolio can be regarded as another generalized of the well-known Helmbold portfolio. By running the portfolios on selected stock-price data sets from the local stock exchange, it is shown that it is possible to increase the wealth of the investor by using the portfolios in investment.

  7. Universal bounds on current fluctuations.

    PubMed

    Pietzonka, Patrick; Barato, Andre C; Seifert, Udo

    2016-05-01

    For current fluctuations in nonequilibrium steady states of Markovian processes, we derive four different universal bounds valid beyond the Gaussian regime. Different variants of these bounds apply to either the entropy change or any individual current, e.g., the rate of substrate consumption in a chemical reaction or the electron current in an electronic device. The bounds vary with respect to their degree of universality and tightness. A universal parabolic bound on the generating function of an arbitrary current depends solely on the average entropy production. A second, stronger bound requires knowledge both of the thermodynamic forces that drive the system and of the topology of the network of states. These two bounds are conjectures based on extensive numerics. An exponential bound that depends only on the average entropy production and the average number of transitions per time is rigorously proved. This bound has no obvious relation to the parabolic bound but it is typically tighter further away from equilibrium. An asymptotic bound that depends on the specific transition rates and becomes tight for large fluctuations is also derived. This bound allows for the prediction of the asymptotic growth of the generating function. Even though our results are restricted to networks with a finite number of states, we show that the parabolic bound is also valid for three paradigmatic examples of driven diffusive systems for which the generating function can be calculated using the additivity principle. Our bounds provide a general class of constraints for nonequilibrium systems.

  8. Adaptive Reuse: Reusing Buildings for Future Generations while Maintaining Connections to the Past.

    ERIC Educational Resources Information Center

    Rossi, John M.

    2003-01-01

    Describes adaptive reuse of college buildings, which involves reconfiguring existing buildings for entirely new functions, including its benefits. Examples include Bartlett Hall at the University of Chicago, Annenberg Hall and Locker Chambers at Harvard University, Goodrich Hall at Williams College, and Sarratt Student Center at Vanderbilt…

  9. College and University Codes of Conduct for Fund-Raising Professionals

    ERIC Educational Resources Information Center

    Caboni, Timothy C.

    2012-01-01

    Generation of voluntary support for colleges and universities has become an ever more important function that is key to the success of all postsecondary institutions. This is true even for public institutions, which have shifted from primarily focusing on alumni relations activities to executing billion dollar campaigns that equal those conducted…

  10. Universality in the dynamical properties of seismic vibrations

    NASA Astrophysics Data System (ADS)

    Chatterjee, Soumya; Barat, P.; Mukherjee, Indranil

    2018-02-01

    We have studied the statistical properties of the observed magnitudes of seismic vibration data in discrete time in an attempt to understand the underlying complex dynamical processes. The observed magnitude data are taken from six different geographical locations. All possible magnitudes are considered in the analysis including catastrophic vibrations, foreshocks, aftershocks and commonplace daily vibrations. The probability distribution functions of these data sets obey scaling law and display a certain universality characteristic. To investigate the universality features in the observed data generated by a complex process, we applied Random Matrix Theory (RMT) in the framework of Gaussian Orthogonal Ensemble (GOE). For all these six places the observed data show a close fit with the predictions of RMT. This reinforces the idea of universality in the dynamical processes generating seismic vibrations.

  11. The Undergraduate Origins of PhD Economists: The Berkeley Experience

    ERIC Educational Resources Information Center

    Olney, Martha L.

    2015-01-01

    The University of California, Berkeley sends more undergraduate students to economics PhD programs than any other public university. While this fact is surely a function of its size, there may be lessons from the Berkeley experience that others could adopt. To investigate why Berkeley generates so many economics PhD students, the author convened…

  12. Universities, Schools, and Communities: A New Generation of Professional Development School Roles, Structures, and Governance

    ERIC Educational Resources Information Center

    Basile, Carole G.; Gutierrez, Cindy

    2011-01-01

    What differentiates the professional development school (PDS) from other schools are the people and the roles they have created to enact the functions or goals unique to the PDS model: preparation of teacher candidates; enhanced professional learning for educators; improved student achievement through the simultaneous renewal of university and…

  13. The Exercise: An Exercise Generator Tool for the SOURCe Project

    ERIC Educational Resources Information Center

    Kakoyianni-Doa, Fryni; Tziafa, Eleni; Naskos, Athanasios

    2016-01-01

    The Exercise, an Exercise generator in the SOURCe project, is a tool that complements the properties and functionalities of the SOURCe project, which includes the search engine for the Searchable Online French-Greek parallel corpus for the UniveRsity of Cyprus (SOURCe) (Kakoyianni-Doa & Tziafa, 2013), the PENCIL (an alignment tool)…

  14. Finite-size scaling of survival probability in branching processes

    NASA Astrophysics Data System (ADS)

    Garcia-Millan, Rosalba; Font-Clos, Francesc; Corral, Álvaro

    2015-04-01

    Branching processes pervade many models in statistical physics. We investigate the survival probability of a Galton-Watson branching process after a finite number of generations. We derive analytically the existence of finite-size scaling for the survival probability as a function of the control parameter and the maximum number of generations, obtaining the critical exponents as well as the exact scaling function, which is G (y ) =2 y ey /(ey-1 ) , with y the rescaled distance to the critical point. Our findings are valid for any branching process of the Galton-Watson type, independently of the distribution of the number of offspring, provided its variance is finite. This proves the universal behavior of the finite-size effects in branching processes, including the universality of the metric factors. The direct relation to mean-field percolation is also discussed.

  15. Simplified and Yet Turing Universal Spiking Neural P Systems with Communication on Request.

    PubMed

    Wu, Tingfang; Bîlbîe, Florin-Daniel; Păun, Andrei; Pan, Linqiang; Neri, Ferrante

    2018-04-02

    Spiking neural P systems are a class of third generation neural networks belonging to the framework of membrane computing. Spiking neural P systems with communication on request (SNQ P systems) are a type of spiking neural P system where the spikes are requested from neighboring neurons. SNQ P systems have previously been proved to be universal (computationally equivalent to Turing machines) when two types of spikes are considered. This paper studies a simplified version of SNQ P systems, i.e. SNQ P systems with one type of spike. It is proved that one type of spike is enough to guarantee the Turing universality of SNQ P systems. Theoretical results are shown in the cases of the SNQ P system used in both generating and accepting modes. Furthermore, the influence of the number of unbounded neurons (the number of spikes in a neuron is not bounded) on the computation power of SNQ P systems with one type of spike is investigated. It is found that SNQ P systems functioning as number generating devices with one type of spike and four unbounded neurons are Turing universal.

  16. Universal Verification Methodology Based Register Test Automation Flow.

    PubMed

    Woo, Jae Hun; Cho, Yong Kwan; Park, Sun Kyu

    2016-05-01

    In today's SoC design, the number of registers has been increased along with complexity of hardware blocks. Register validation is a time-consuming and error-pron task. Therefore, we need an efficient way to perform verification with less effort in shorter time. In this work, we suggest register test automation flow based UVM (Universal Verification Methodology). UVM provides a standard methodology, called a register model, to facilitate stimulus generation and functional checking of registers. However, it is not easy for designers to create register models for their functional blocks or integrate models in test-bench environment because it requires knowledge of SystemVerilog and UVM libraries. For the creation of register models, many commercial tools support a register model generation from register specification described in IP-XACT, but it is time-consuming to describe register specification in IP-XACT format. For easy creation of register model, we propose spreadsheet-based register template which is translated to IP-XACT description, from which register models can be easily generated using commercial tools. On the other hand, we also automate all the steps involved integrating test-bench and generating test-cases, so that designers may use register model without detailed knowledge of UVM or SystemVerilog. This automation flow involves generating and connecting test-bench components (e.g., driver, checker, bus adaptor, etc.) and writing test sequence for each type of register test-case. With the proposed flow, designers can save considerable amount of time to verify functionality of registers.

  17. The Changing Nature of the Role of the University Supervisor and Function of Preservice Teacher Supervision in an Era of Clinically-Rich Practice

    ERIC Educational Resources Information Center

    Burns, Rebecca West; Jacobs, Jennifer; Yendol-Hoppey, Diane

    2016-01-01

    Given the movement to enhanced clinical experiences and school-university collaboration emphasized in the NCATE Blue Ribbon Report, the field of teacher preparation would benefit from an understanding of the research related to preservice teacher (PST) supervision. This article uses qualitative meta-analysis to generate new knowledge about PST…

  18. MOEMs-based new functionalities for future instrumentation in space

    NASA Astrophysics Data System (ADS)

    Zamkotsian, Frédéric; Liotard, Arnaud; Viard, Thierry; Costes, Vincent; Hébert, Philippe-Jean; Hinglais, Emmanuel; Villenave, Michel

    2017-11-01

    Micro-Opto-Electro-Mechanical Systems (MOEMS) could be key components in future generation of space instruments. In Earth Observation, Universe Observation and Planet Exploration, scientific return of the instruments must be optimized in future missions. MOEMS devices are based on the mature micro-electronics technology and in addition to their compactness, scalability, and specific task customization, they could generate new functions not available with current technologies. CNES has initiated a study with LAM and TAS for listing the new functions associated with several types of MEMS (programmable slits, programmable micro-diffraction gratings, micro-deformable mirrors). Instrumental applications are then derived and promising concepts are described.

  19. 1,8-Naphthyridine-2,7-diamine: a potential universal reader of Watson-Crick base pairs for DNA sequencing by electron tunneling.

    PubMed

    Liang, Feng; Lindsay, Stuart; Zhang, Peiming

    2012-11-21

    With the aid of Density Functional Theory (DFT), we designed 1,8-naphthyridine-2,7-diamine as a recognition molecule to read DNA base pairs for genomic sequencing by electron tunneling. NMR studies show that it can form stable triplets with both A : T and G : C base pairs through hydrogen bonding. Our results suggest that the naphthyridine molecule should be able to function as a universal base pair reader in a tunneling gap, generating distinguishable signatures under electrical bias for each of DNA base pairs.

  20. 1,8-Naphthyridine-2,7-diamine: A Potential Universal Reader of the Watson-Crick Base Pairs for DNA Sequencing by Electron Tunneling

    PubMed Central

    Liang, Feng; Lindsay, Stuart; Zhang, Peiming

    2013-01-01

    With the aid of Density Functional Theory (DFT), we designed 1,8-naphthyridine-2,7-diamine as a recognition molecule to read the DNA base pairs for genomic sequencing by electron tunneling. NMR studies show that it can form stable triplets with both A:T and G:C base pairs through hydrogen bonding. Our results suggest that the naphthyridine molecule should be able to function as a universal base pair reader in a tunneling gap, generating distinguishable signatures under electrical bias for each of DNA base pairs. PMID:23038027

  1. The Y2K Problem: Will It Just Be Another New Year's Eve?

    ERIC Educational Resources Information Center

    Iwanowski, Jay

    1998-01-01

    Potential problems for college and university computing functions posed by arrival of the year 2000 (Y2K) are discussed, including arithmetic calculations and sorting functions based on two-digit year dates, embedding of two-digit dates in archival data, system coordination for data exchange, unique number generation, and leap year calculations. A…

  2. Program Synthesizes UML Sequence Diagrams

    NASA Technical Reports Server (NTRS)

    Barry, Matthew R.; Osborne, Richard N.

    2006-01-01

    A computer program called "Rational Sequence" generates Universal Modeling Language (UML) sequence diagrams of a target Java program running on a Java virtual machine (JVM). Rational Sequence thereby performs a reverse engineering function that aids in the design documentation of the target Java program. Whereas previously, the construction of sequence diagrams was a tedious manual process, Rational Sequence generates UML sequence diagrams automatically from the running Java code.

  3. Scalable Generation of Universal Platelets from Human Induced Pluripotent Stem Cells

    PubMed Central

    Feng, Qiang; Shabrani, Namrata; Thon, Jonathan N.; Huo, Hongguang; Thiel, Austin; Machlus, Kellie R.; Kim, Kyungho; Brooks, Julie; Li, Feng; Luo, Chenmei; Kimbrel, Erin A.; Wang, Jiwu; Kim, Kwang-Soo; Italiano, Joseph; Cho, Jaehyung; Lu, Shi-Jiang; Lanza, Robert

    2014-01-01

    Summary Human induced pluripotent stem cells (iPSCs) provide a potentially replenishable source for the production of transfusable platelets. Here, we describe a method to generate megakaryocytes (MKs) and functional platelets from iPSCs in a scalable manner under serum/feeder-free conditions. The method also permits the cryopreservation of MK progenitors, enabling a rapid “surge” capacity when large numbers of platelets are needed. Ultrastructural/morphological analyses show no major differences between iPSC platelets and human blood platelets. iPSC platelets form aggregates, lamellipodia, and filopodia after activation and circulate in macrophage-depleted animals and incorporate into developing mouse thrombi in a manner identical to human platelets. By knocking out the β2-microglobulin gene, we have generated platelets that are negative for the major histocompatibility antigens. The scalable generation of HLA-ABC-negative platelets from a renewable cell source represents an important step toward generating universal platelets for transfusion as well as a potential strategy for the management of platelet refractoriness. PMID:25418726

  4. Scalable generation of universal platelets from human induced pluripotent stem cells.

    PubMed

    Feng, Qiang; Shabrani, Namrata; Thon, Jonathan N; Huo, Hongguang; Thiel, Austin; Machlus, Kellie R; Kim, Kyungho; Brooks, Julie; Li, Feng; Luo, Chenmei; Kimbrel, Erin A; Wang, Jiwu; Kim, Kwang-Soo; Italiano, Joseph; Cho, Jaehyung; Lu, Shi-Jiang; Lanza, Robert

    2014-11-11

    Human induced pluripotent stem cells (iPSCs) provide a potentially replenishable source for the production of transfusable platelets. Here, we describe a method to generate megakaryocytes (MKs) and functional platelets from iPSCs in a scalable manner under serum/feeder-free conditions. The method also permits the cryopreservation of MK progenitors, enabling a rapid "surge" capacity when large numbers of platelets are needed. Ultrastructural/morphological analyses show no major differences between iPSC platelets and human blood platelets. iPSC platelets form aggregates, lamellipodia, and filopodia after activation and circulate in macrophage-depleted animals and incorporate into developing mouse thrombi in a manner identical to human platelets. By knocking out the β2-microglobulin gene, we have generated platelets that are negative for the major histocompatibility antigens. The scalable generation of HLA-ABC-negative platelets from a renewable cell source represents an important step toward generating universal platelets for transfusion as well as a potential strategy for the management of platelet refractoriness.

  5. Regulation and physiological functions of mammalian phospholipase C.

    PubMed

    Nakamura, Yoshikazu; Fukami, Kiyoko

    2017-04-01

    Phospholipase C (PLC) is a key enzyme in phosphoinositide metabolism. PLC hydrolyses phosphatidylinositol 4,5-bis-phosphate to generate two second messengers, inositol 1,4,5-trisphosphate and diacylglycerol, that generate diverse cellular responses. PLC is activated by various signalling molecules, including Ca2+, heterometric G proteins, small G proteins, and receptor/non-receptor tyrosine kinases. In addition to their enzymatic activity, some PLC subtypes also function as a guanine nucleotide exchange factor, GTPase-activating protein, and adaptor protein, independent of their lipase activity. There are 13 PLC isozymes in mammals, and they are categorized into six classes based on structure. Generation and analysis of genetically modified mice has revealed the unexpectedly diverse physiological functions of PLC isozymes. Although all PLC isozymes catalyze the same reaction, each PLC isozyme has unique physiological functions. This review focuses on the regulation and physiological functions of PLCs. © The Authors 2017. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved.

  6. Implementation and Research on the Operational Use of the Mesoscale Prediction Model COAMPS in Poland

    DTIC Science & Technology

    2007-09-30

    COAMPS model. Bogumil Jakubiak, University of Warsaw – participated in EGU General Assembly , Vienna Austria 15-20 April 2007 giving one oral and two...conditional forecast (background) error probability density function using an ensemble of the model forecast to generate background error statistics...COAMPS system on ICM machines at Warsaw University for the purpose of providing operational support to the general public using the ICM meteorological

  7. Hai Long | NREL

    Science.gov Websites

    research interests are broadly in computational modeling for renewable energy generation and energy ions transport in fuel cell and bioenergetics enzymes, and functional membrane structure modeling and University Featured Publications Hydroxide Degradation Pathways for Imidazolium Cations: A DFT Study, J. Phys

  8. Scalar field cosmology in f(R,T) gravity via Noether symmetry

    NASA Astrophysics Data System (ADS)

    Sharif, M.; Nawazish, Iqra

    2018-04-01

    This paper investigates the existence of Noether symmetries of isotropic universe model in f(R,T) gravity admitting minimal coupling of matter and scalar fields. The scalar field incorporates two dark energy models such as quintessence and phantom models. We determine symmetry generators and corresponding conserved quantities for two particular f(R,T) models. We also evaluate exact solutions and investigate their physical behavior via different cosmological parameters. For the first model, the graphical behavior of these parameters indicate consistency with recent observations representing accelerated expansion of the universe. For the second model, these parameters identify a transition form accelerated to decelerated expansion of the universe. The potential function is found to be constant for the first model while it becomes V(φ )≈ φ 2 for the second model. We conclude that the Noether symmetry generators and corresponding conserved quantities appear in all cases.

  9. A Database Management System for Interlibrary Loan.

    ERIC Educational Resources Information Center

    Chang, Amy

    1990-01-01

    Discusses the increasing complexity of dealing with interlibrary loan requests and describes a database management system for interlibrary loans used at Texas Tech University. System functions are described, including file control, records maintenance, and report generation, and the impact on staff productivity is discussed. (CLB)

  10. Functional fixedness in a technologically sparse culture.

    PubMed

    German, Tim P; Barrett, H Clark

    2005-01-01

    Problem solving can be inefficient when the solution requires subjects to generate an atypical function for an object and the object's typical function has been primed. Subjects become "fixed" on the design function of the object, and problem solving suffers relative to control conditions in which the object's function is not demonstrated. In the current study, such functional fixedness was demonstrated in a sample of adolescents (mean age of 16 years) among the Shuar of Ecuadorian Amazonia, whose technologically sparse culture provides limited access to large numbers of artifacts with highly specialized functions. This result suggests that design function may universally be the core property of artifact concepts in human semantic memory.

  11. Programmable wide field spectrograph for earth observation

    NASA Astrophysics Data System (ADS)

    Zamkotsian, Frédéric; Lanzoni, Patrick; Liotard, Arnaud; Viard, Thierry; Costes, Vincent; Hébert, Philippe-Jean

    2017-11-01

    In Earth Observation, Universe Observation and Planet Exploration, scientific return of the instruments must be optimized in future missions. Micro-Opto-Electro-Mechanical Systems (MOEMS) could be key components in future generation of space instruments. These devices are based on the mature micro-electronics technology and in addition to their compactness, scalability, and specific task customization, they could generate new functions not available with current technologies. French and European space agencies, the Centre National d'Etudes Spatiales (CNES) and the European Space Agency (ESA) have initiated several studies with LAM and TAS for listing the new functions associated with several types of MEMS, and developing new ideas of instruments.

  12. Subtle Implicit Language Facts Emerge from the Functions of Constructions

    PubMed Central

    Goldberg, Adele E.

    2016-01-01

    Much has been written about the unlikelihood of innate, syntax-specific, universal knowledge of language (Universal Grammar) on the grounds that it is biologically implausible, unresponsive to cross-linguistic facts, theoretically inelegant, and implausible and unnecessary from the perspective of language acquisition. While relevant, much of this discussion fails to address the sorts of facts that generative linguists often take as evidence in favor of the Universal Grammar Hypothesis: subtle, intricate, knowledge about language that speakers implicitly know without being taught. This paper revisits a few often-cited such cases and argues that, although the facts are sometimes even more complex and subtle than is generally appreciated, appeals to Universal Grammar fail to explain the phenomena. Instead, such facts are strongly motivated by the functions of the constructions involved. The following specific cases are discussed: (a) the distribution and interpretation of anaphoric one, (b) constraints on long-distance dependencies, (c) subject-auxiliary inversion, and (d) cross-linguistic linking generalizations between semantics and syntax. PMID:26858662

  13. An Upper Limit on the Functional Fraction of the Human Genome.

    PubMed

    Graur, Dan

    2017-07-01

    For the human population to maintain a constant size from generation to generation, an increase in fertility must compensate for the reduction in the mean fitness of the population caused, among others, by deleterious mutations. The required increase in fertility due to this mutational load depends on the number of sites in the genome that are functional, the mutation rate, and the fraction of deleterious mutations among all mutations in functional regions. These dependencies and the fact that there exists a maximum tolerable replacement level fertility can be used to put an upper limit on the fraction of the human genome that can be functional. Mutational load considerations lead to the conclusion that the functional fraction within the human genome cannot exceed 25%, and is probably considerably lower. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  14. On the Application of Information Theory to Sustainability

    EPA Science Inventory

    According to the 2nd Law of Thermodynamics, entropy must be an increasing function of time for the whole universe, system plus surroundings. This gives rise to conjectures regarding the lost of work with entropy generation in a general processes. It can be shown that under cond...

  15. An Examination of Attachment Styles and Social Skills of University Students

    ERIC Educational Resources Information Center

    Dereli, Esra; Karakus, Ozlem

    2011-01-01

    Introduction: Attachment organization across the lifespan and across generations, long-term predictions from attachment organization to later psychosocial functioning, and the possibility of altering attachment organization with intervention suggest that attachment theory may potentially shed valuable light on adult social development and deviant…

  16. Development of enterprise architecture in university using TOGAF as framework

    NASA Astrophysics Data System (ADS)

    Amalia, Endang; Supriadi, Hari

    2017-06-01

    The university of XYZ is located in Bandung, West Java. It has an infrastructure of technology information (IT) which is managed independently. Currently, the IT at the University of XYZ employs a complex conventional management pattern that does not result in a fully integrated IT infrastructure. This is not adaptive in addressing solutions to changing business needs and applications. In addition, it impedes the innovative development of sustainable IT services and also contributes to an unnecessary high workload for managers. This research aims to establish the concept of IS/IT strategic planning. This is used in the development of the IS/IT and in designing the information technology infrastructure based on the framework of The Open Group Architecture Framework (TOGAF) and Architecture Development Method (ADM). A case study will be done at the University of XYZ using the concept of qualitative research through review of literatures and interviews. This study generates the following stages:(1) forming a design using TOGAF and the ADM around nine functional areas of business and propose 12 application candidates to be developed at XYZ University; (2) generating 11 principles of the development of information technology architecture; (3) creating a portfolio for future applications (McFarlan Grid), generating 6 applications in the strategic quadrant (SIAKAD-T, E-LIBRARY, SIPADU-T, DSS, SIPPM-T, KMS), 2 quadrant application operations (PMS-T, CRM), 4 quadrant application supports (MNC-T, NOPEC-T, EMAIL-SYSTEM, SSO); and (4) modelling the enterprise architecture of this study which could be a reference in making a blueprint for the development of information systems and information technology at the University of XYZ.

  17. Neutron light output response and resolution functions in EJ-309 liquid scintillation detectors

    DOE PAGES

    Enqvist, Andreas; Lawrence, Christopher C.; Wieger, Brian M.; ...

    2013-03-26

    Here, the neutron light output response functions and detector resolution functions were measured at Ohio University's tandem Van de Graaff generator for three cylindrical EJ-309 liquid scintillator cells, having dimensions 12.7(circle divide)-by-12.7, 7.6-by-7.6, and 7.6-by-5.1 cm. A 7.44 MeV deuteron beam was used on an Al-27 target generating a continuous spectrum over the energy range from a few hundred keV to over 10 MeV. The light output response functions are determined using an exponential fit. Detector resolution functions are obtained for the 12.7-by-12.7 and 7.6-by-7.6 cm detectors. It is demonstrated that the dependence on detector size is important for themore » light output response functions, but not to the same extent for the resolution function, even when photomultiplier tubes, detector material, and other detector characteristics are carefully matched.« less

  18. On the Application of Information Theory to Regime Changes and Sustainability

    EPA Science Inventory

    According to the 2nd Law of Thermodynamics, entropy must be an increasing function of time for the whole universe, system plus surroundings. This gives rise to conjectures regarding the lost of work with entropy generation in a general processes. It can be shown that under cond...

  19. Holographic multiverse and conformal invariance

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Garriga, Jaume; Vilenkin, Alexander, E-mail: jaume.garriga@ub.edu, E-mail: vilenkin@cosmos.phy.tufts.edu

    2009-11-01

    We consider a holographic description of the inflationary multiverse, according to which the wave function of the universe is interpreted as the generating functional for a lower dimensional Euclidean theory. We analyze a simple model where transitions between inflationary vacua occur through bubble nucleation, and the inflating part of spacetime consists of de Sitter regions separated by thin bubble walls. In this model, we present some evidence that the dual theory is conformally invariant in the UV.

  20. Fourth-generation spinal instrumentation: experience with adolescent idiopathic scoliosis at a tertiary care hospital in Pakistan.

    PubMed

    Fazal, Akil; Lakdawala, Riaz H

    2012-01-01

    To evaluate the radiological and functional outcome of surgical treatment of adolescent idiopathic scoliosis using fourth-generation posterior spinal instrumentation at The Aga Khan University, Karachi, Pakistan. Case series. The Aga Khan University Hospital after a minimum of 2 years postoperatively. A total of 20 patients with adolescent idiopathic scoliosis were recruited into the study and evaluated for radiological and functional outcome. The study period was from 2000 to 2005. Radiological outcome was assessed using Cobb angle measurement pre and postoperatively, hence assessing percentage correction. The lower instrumented vertebra was taken as the neutral vertebra and the level was recorded. Functional outcome was determined using the Scoliosis Research Society patient administered questionnaire. All patients were called to the clinic and asked to fill in the form. Those patients who were out of the city were mailed the forms and requested via telephone to complete and return. Of the 20 patients operated on, twelve were female and eight were male. The average age at operation was 12.7 years. The mean Cobb angle was 69° preoperatively and 20° postoperatively, representing a percentage correction of 71%. The average duration of follow-up was 3.6 years. There was one major complication involving neurological injury post-op and two minor complications involving wound infection. The average Scoliosis Research Society score (on a scale of 1-5, with 5 being best) for pain was 4.5, self-image was 4.2, functional status was 4.1, mental status was 3.8, and satisfaction was 4.4. There was no relationship between the percentage correction of scoliosis and the functional outcome. Those patients with a high preoperative Cobb angle tended to have a better outcome for functional and mental status postoperatively. There was no relation between the lower instrumented vertebra and functional outcome. In the correct indications, fourth-generation posterior instrumentation and fusion is a reliable and satisfactory technique to treat adolescent idiopathic scoliosis.

  1. Profitability of a university-based clinic using benchmark time lengths for clinical encounters.

    PubMed

    Penneys, N S; Glaser, D A

    1997-11-01

    Reductions in reimbursement are applied to all physicians in a region equally. However, physicians do not practice in equivalent situations. For example, there are few fiscal allowances for academic functions associated with teaching and administration. Furthermore, university-based physicians may practice in clinical venues that cannot be as efficient as nonuniversity sites. Unavoidable inefficiencies may include (1) the costs of maintaining one historical record for a large noncontiguous practice; (2) university-required holiday schedules and sick leave, making university personnel less productive; (3) noncompetitive overhead rates assigned to clinic components by university financial offices; (4) university-based accounting systems that are not designed for effective cost control and the timely generation of useful management information; and (5) poorly managed billing services. Until now, declining reimbursements have generally led to sufficient efficiencies in delivery so that revenues and expenses can be in equilibrium.

  2. Universities as Hubs for Next-Generation Networks: A Model for Universities to Spur 21st Century Internet Access and Innovation in Their Communities

    ERIC Educational Resources Information Center

    Lennett, Benjamin; Morris, Sarah J.; Byrum, Greta

    2012-01-01

    Based on a request for information (RFI) submitted to The University Community Next Generation Innovation Project (Gig.U), the paper describes a model for universities to develop next generation broadband infrastructure in their communities. In the our view universities can play a critical role in spurring next generation networks into their…

  3. Universal Linear Motor Driven Leg Press Dynamometer and Concept of Serial Stretch Loading.

    PubMed

    Hamar, Dušan

    2015-08-24

    Paper deals with backgrounds and principles of universal linear motor driven leg press dynamometer and concept of serial stretch loading. The device is based on two computer controlled linear motors mounted to the horizontal rails. As the motors can keep either constant resistance force in selected position or velocity in both directions, the system allows simulation of any mode of muscle contraction. In addition, it also can generate defined serial stretch stimuli in a form of repeated force peaks. This is achieved by short segments of reversed velocity (in concentric phase) or acceleration (in eccentric phase). Such stimuli, generated at the rate of 10 Hz, have proven to be a more efficient means for the improvement of rate of the force development. This capability not only affects performance in many sports, but also plays a substantial role in prevention of falls and their consequences. Universal linear motor driven and computer controlled dynamometer with its unique feature to generate serial stretch stimuli seems to be an efficient and useful tool for enhancing strength training effects on neuromuscular function not only in athletes, but as well as in senior population and rehabilitation patients.

  4. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Essman, Eric P.; Aganagic, Mina; Okuda, Takuya

    We study quantum entanglements of baby universes which appear in non-perturbative corrections to the OSV formula for the entropy of extremal black holes in type IIA string theory compactified on the local Calabi-Yau manifold defined as a rank 2 vector bundle over an arbitrary genus G Riemann surface. This generalizes the result for G=1 in hep-th/0504221. Non-perturbative terms can be organized into a sum over contributions from baby universes, and the total wave-function is their coherent superposition in the third quantized Hilbert space. We find that half of the universes preserve one set of supercharges while the other half preservemore » a different set, making the total universe stable but non-BPS. The parent universe generates baby universes by brane/anti-brane pair creation, and baby universes are correlated by conservation of non-normalizable D-brane charges under the process. There are no other source of entanglement of baby universes, and all possible states are superposed with the equal weight.« less

  5. Anamorphic quasiperiodic universes in modified and Einstein gravity with loop quantum gravity corrections

    NASA Astrophysics Data System (ADS)

    Amaral, Marcelo M.; Aschheim, Raymond; Bubuianu, Laurenţiu; Irwin, Klee; Vacaru, Sergiu I.; Woolridge, Daniel

    2017-09-01

    The goal of this work is to elaborate on new geometric methods of constructing exact and parametric quasiperiodic solutions for anamorphic cosmology models in modified gravity theories, MGTs, and general relativity, GR. There exist previously studied generic off-diagonal and diagonalizable cosmological metrics encoding gravitational and matter fields with quasicrystal like structures, QC, and holonomy corrections from loop quantum gravity, LQG. We apply the anholonomic frame deformation method, AFDM, in order to decouple the (modified) gravitational and matter field equations in general form. This allows us to find integral varieties of cosmological solutions determined by generating functions, effective sources, integration functions and constants. The coefficients of metrics and connections for such cosmological configurations depend, in general, on all spacetime coordinates and can be chosen to generate observable (quasi)-periodic/aperiodic/fractal/stochastic/(super) cluster/filament/polymer like (continuous, stochastic, fractal and/or discrete structures) in MGTs and/or GR. In this work, we study new classes of solutions for anamorphic cosmology with LQG holonomy corrections. Such solutions are characterized by nonlinear symmetries of generating functions for generic off-diagonal cosmological metrics and generalized connections, with possible nonholonomic constraints to Levi-Civita configurations and diagonalizable metrics depending only on a time like coordinate. We argue that anamorphic quasiperiodic cosmological models integrate the concept of quantum discrete spacetime, with certain gravitational QC-like vacuum and nonvacuum structures. And, that of a contracting universe that homogenizes, isotropizes and flattens without introducing initial conditions or multiverse problems.

  6. CORALINA: a universal method for the generation of gRNA libraries for CRISPR-based screening.

    PubMed

    Köferle, Anna; Worf, Karolina; Breunig, Christopher; Baumann, Valentin; Herrero, Javier; Wiesbeck, Maximilian; Hutter, Lukas H; Götz, Magdalena; Fuchs, Christiane; Beck, Stephan; Stricker, Stefan H

    2016-11-14

    The bacterial CRISPR system is fast becoming the most popular genetic and epigenetic engineering tool due to its universal applicability and adaptability. The desire to deploy CRISPR-based methods in a large variety of species and contexts has created an urgent need for the development of easy, time- and cost-effective methods enabling large-scale screening approaches. Here we describe CORALINA (comprehensive gRNA library generation through controlled nuclease activity), a method for the generation of comprehensive gRNA libraries for CRISPR-based screens. CORALINA gRNA libraries can be derived from any source of DNA without the need of complex oligonucleotide synthesis. We show the utility of CORALINA for human and mouse genomic DNA, its reproducibility in covering the most relevant genomic features including regulatory, coding and non-coding sequences and confirm the functionality of CORALINA generated gRNAs. The simplicity and cost-effectiveness make CORALINA suitable for any experimental system. The unprecedented sequence complexities obtainable with CORALINA libraries are a necessary pre-requisite for less biased large scale genomic and epigenomic screens.

  7. Relation between respiratory function tests and life habits of the university students.

    PubMed

    Saygin, Mustafa; Ongel, Kurtuluş; Caliskan, Sadettin

    2015-05-01

    Among the university students especially in adolescence period, smoking habits and unhealthy lifestyles are major problems in social life. In this study, it is intended to reveal smoking habits and lifestyles of the students from Suleyman Demirel University and to determine the effects of smoking and lifestyles on pulmonary functions. Participants were 94 university students who were getting formal education in the Suleyman Demirel University central campus. Data were analysed by analysis of variance and chi-square tests. For all analysis, p value of <0.05 was considered significant. Students' mean age was 19.9 ± 0.9 years, and of all the students 74 (78.7%) were undergraduate students; remaining 20 (21.3%) were graduate students. Of all the students, 27 (28.7%), which comprised the largest group of the students, were living in state dormitory. Body mass index (BMI) was examined for the study group; according to BMI, body weight was generally within normal limits but 17.39% of girls' were found to be underweight. Respiratory parameters can be affected by many factors. Smoking habit of university students can be prevented, and it is an important point that they have a healthy lifestyle both for their own health and for future generations. © The Author(s) 2013.

  8. RAId_aPS: MS/MS Analysis with Multiple Scoring Functions and Spectrum-Specific Statistics

    PubMed Central

    Alves, Gelio; Ogurtsov, Aleksey Y.; Yu, Yi-Kuo

    2010-01-01

    Statistically meaningful comparison/combination of peptide identification results from various search methods is impeded by the lack of a universal statistical standard. Providing an -value calibration protocol, we demonstrated earlier the feasibility of translating either the score or heuristic -value reported by any method into the textbook-defined -value, which may serve as the universal statistical standard. This protocol, although robust, may lose spectrum-specific statistics and might require a new calibration when changes in experimental setup occur. To mitigate these issues, we developed a new MS/MS search tool, RAId_aPS, that is able to provide spectrum-specific -values for additive scoring functions. Given a selection of scoring functions out of RAId score, K-score, Hyperscore and XCorr, RAId_aPS generates the corresponding score histograms of all possible peptides using dynamic programming. Using these score histograms to assign -values enables a calibration-free protocol for accurate significance assignment for each scoring function. RAId_aPS features four different modes: (i) compute the total number of possible peptides for a given molecular mass range, (ii) generate the score histogram given a MS/MS spectrum and a scoring function, (iii) reassign -values for a list of candidate peptides given a MS/MS spectrum and the scoring functions chosen, and (iv) perform database searches using selected scoring functions. In modes (iii) and (iv), RAId_aPS is also capable of combining results from different scoring functions using spectrum-specific statistics. The web link is http://www.ncbi.nlm.nih.gov/CBBresearch/Yu/raid_aps/index.html. Relevant binaries for Linux, Windows, and Mac OS X are available from the same page. PMID:21103371

  9. Mapping Their Road to University: First-Generation Students' Choice and Decision of University

    ERIC Educational Resources Information Center

    Kutty, Faridah Mydin

    2014-01-01

    This paper describes a qualitative case study that investigated the aspirations and decision-making process of first-generation students concerning university education. The participants comprised of 16 first-generation students at a research university. Data were obtained through interviews and analyzed using thematic analysis method. The…

  10. A Universal and Robust Integrated Platform for the Scalable Production of Human Cardiomyocytes From Pluripotent Stem Cells.

    PubMed

    Fonoudi, Hananeh; Ansari, Hassan; Abbasalizadeh, Saeed; Larijani, Mehran Rezaei; Kiani, Sahar; Hashemizadeh, Shiva; Zarchi, Ali Sharifi; Bosman, Alexis; Blue, Gillian M; Pahlavan, Sara; Perry, Matthew; Orr, Yishay; Mayorchak, Yaroslav; Vandenberg, Jamie; Talkhabi, Mahmood; Winlaw, David S; Harvey, Richard P; Aghdami, Nasser; Baharvand, Hossein

    2015-12-01

    Recent advances in the generation of cardiomyocytes (CMs) from human pluripotent stem cells (hPSCs), in conjunction with the promising outcomes from preclinical and clinical studies, have raised new hopes for cardiac cell therapy. We report the development of a scalable, robust, and integrated differentiation platform for large-scale production of hPSC-CM aggregates in a stirred suspension bioreactor as a single-unit operation. Precise modulation of the differentiation process by small molecule activation of WNT signaling, followed by inactivation of transforming growth factor-β and WNT signaling and activation of sonic hedgehog signaling in hPSCs as size-controlled aggregates led to the generation of approximately 100% beating CM spheroids containing virtually pure (∼90%) CMs in 10 days. Moreover, the developed differentiation strategy was universal, as demonstrated by testing multiple hPSC lines (5 human embryonic stem cell and 4 human inducible PSC lines) without cell sorting or selection. The produced hPSC-CMs successfully expressed canonical lineage-specific markers and showed high functionality, as demonstrated by microelectrode array and electrophysiology tests. This robust and universal platform could become a valuable tool for the mass production of functional hPSC-CMs as a prerequisite for realizing their promising potential for therapeutic and industrial applications, including drug discovery and toxicity assays. Recent advances in the generation of cardiomyocytes (CMs) from human pluripotent stem cells (hPSCs) and the development of novel cell therapy strategies using hPSC-CMs (e.g., cardiac patches) in conjunction with promising preclinical and clinical studies, have raised new hopes for patients with end-stage cardiovascular disease, which remains the leading cause of morbidity and mortality globally. In this study, a simplified, scalable, robust, and integrated differentiation platform was developed to generate clinical grade hPSC-CMs as cell aggregates under chemically defined culture conditions. This approach resulted in approximately 100% beating CM spheroids with virtually pure (∼90%) functional cardiomyocytes in 10 days from multiple hPSC lines. This universal and robust bioprocessing platform can provide sufficient numbers of hPSC-CMs for companies developing regenerative medicine technologies to rescue, replace, and help repair damaged heart tissues and for pharmaceutical companies developing advanced biologics and drugs for regeneration of lost heart tissue using high-throughput technologies. It is believed that this technology can expedite clinical progress in these areas to achieve a meaningful impact on improving clinical outcomes, cost of care, and quality of life for those patients disabled and experiencing heart disease. ©AlphaMed Press.

  11. A Universal and Robust Integrated Platform for the Scalable Production of Human Cardiomyocytes From Pluripotent Stem Cells

    PubMed Central

    Fonoudi, Hananeh; Ansari, Hassan; Abbasalizadeh, Saeed; Larijani, Mehran Rezaei; Kiani, Sahar; Hashemizadeh, Shiva; Zarchi, Ali Sharifi; Bosman, Alexis; Blue, Gillian M.; Pahlavan, Sara; Perry, Matthew; Orr, Yishay; Mayorchak, Yaroslav; Vandenberg, Jamie; Talkhabi, Mahmood; Winlaw, David S.; Harvey, Richard P.; Aghdami, Nasser

    2015-01-01

    Recent advances in the generation of cardiomyocytes (CMs) from human pluripotent stem cells (hPSCs), in conjunction with the promising outcomes from preclinical and clinical studies, have raised new hopes for cardiac cell therapy. We report the development of a scalable, robust, and integrated differentiation platform for large-scale production of hPSC-CM aggregates in a stirred suspension bioreactor as a single-unit operation. Precise modulation of the differentiation process by small molecule activation of WNT signaling, followed by inactivation of transforming growth factor-β and WNT signaling and activation of sonic hedgehog signaling in hPSCs as size-controlled aggregates led to the generation of approximately 100% beating CM spheroids containing virtually pure (∼90%) CMs in 10 days. Moreover, the developed differentiation strategy was universal, as demonstrated by testing multiple hPSC lines (5 human embryonic stem cell and 4 human inducible PSC lines) without cell sorting or selection. The produced hPSC-CMs successfully expressed canonical lineage-specific markers and showed high functionality, as demonstrated by microelectrode array and electrophysiology tests. This robust and universal platform could become a valuable tool for the mass production of functional hPSC-CMs as a prerequisite for realizing their promising potential for therapeutic and industrial applications, including drug discovery and toxicity assays. Significance Recent advances in the generation of cardiomyocytes (CMs) from human pluripotent stem cells (hPSCs) and the development of novel cell therapy strategies using hPSC-CMs (e.g., cardiac patches) in conjunction with promising preclinical and clinical studies, have raised new hopes for patients with end-stage cardiovascular disease, which remains the leading cause of morbidity and mortality globally. In this study, a simplified, scalable, robust, and integrated differentiation platform was developed to generate clinical grade hPSC-CMs as cell aggregates under chemically defined culture conditions. This approach resulted in approximately 100% beating CM spheroids with virtually pure (∼90%) functional cardiomyocytes in 10 days from multiple hPSC lines. This universal and robust bioprocessing platform can provide sufficient numbers of hPSC-CMs for companies developing regenerative medicine technologies to rescue, replace, and help repair damaged heart tissues and for pharmaceutical companies developing advanced biologics and drugs for regeneration of lost heart tissue using high-throughput technologies. It is believed that this technology can expedite clinical progress in these areas to achieve a meaningful impact on improving clinical outcomes, cost of care, and quality of life for those patients disabled and experiencing heart disease. PMID:26511653

  12. The Function of Native American Storytelling as Means of Education in Luci Tapahonso's Selected Poems

    ERIC Educational Resources Information Center

    Saddam, Widad Allawi; Ya, Wan Roselezam Wan

    2015-01-01

    Native American storytelling has become a very vital issue in education. It preserves Native American history for the next generation and teaches them important lessons about the Native American culture. It also conveys moral meanings, knowledge and social values of the Native American people to the universe. More importantly, Native American…

  13. Feasibility, Design and Construction of a Small Hydroelectric Power Generation Station as a Student Design Project.

    ERIC Educational Resources Information Center

    Peterson, James N.; Hess, Herbert L.

    An undergraduate capstone engineering design project now provides hydroelectric power to a remote wilderness location. Students investigated the feasibility of designing, building, and installing a 4kW hydroelectric system to satisfy the need for electric power to support the research and teaching functions of Taylor Ranch, a university facility…

  14. Qualitative Organic Analysis: An Efficient, Safer, and Economical Approach to Preliminary Tests and Functional Group Analysis

    ERIC Educational Resources Information Center

    Dhingra, Sunita; Angrish, Chetna

    2011-01-01

    Qualitative organic analysis of an unknown compound is an integral part of the university chemistry laboratory curriculum. This type of training is essential as students learn to approach a problem systematically and to interpret the results logically. However, considerable quantities of waste are generated by using conventional methods of…

  15. Biopolymer encapsulated live influenza virus as a universal CD8+ T cell vaccine against influenza virus.

    PubMed

    Boesteanu, Alina C; Babu, Nadarajan S; Wheatley, Margaret; Papazoglou, Elisabeth S; Katsikis, Peter D

    2010-12-16

    Current influenza virus vaccines primarily elicit antibodies and can be rendered ineffective by antigenic drift and shift. Vaccines that elicit CD8+ T cell responses targeting less variable proteins may function as universal vaccines that have broad reactivity against different influenza virus strains. To generate such a universal vaccine, we encapsulated live influenza virus in a biopolymer and delivered it to mice subcutaneously. This vaccine was safe, induced potent CD8+ T cell immunity and protected mice against heterosubtypic lethal challenge. Safety of subcutaneous (SQ) vaccination was tested in Rag-/-γc-/- double knockout mice which we show cannot control intranasal infection. Biopolymer encapsulation of live influenza virus could be used to develop universal CD8+ T cell vaccines against heterosubtypic and pandemic strains. Copyright © 2010 Elsevier Ltd. All rights reserved.

  16. Planckian Information (Ip): A New Measure of Order in Atoms, Enzymes, Cells, Brains, Human Societies, and the Cosmos

    NASA Astrophysics Data System (ADS)

    Ji, Sungchul

    A new mathematical formula referred to as the Planckian distribution equation (PDE) has been found to fit long-tailed histograms generated in various fields of studies, ranging from atomic physics to single-molecule enzymology, cell biology, brain neurobiology, glottometrics, econophysics, and to cosmology. PDE can be derived from a Gaussian-like equation (GLE) by non-linearly transforming its variable, x, while keeping the y coordinate constant. Assuming that GLE represents a random distribution (due to its symmetry), it is possible to define a binary logarithm of the ratio between the areas under the curves of PDE and GLE as a measure of the non-randomness (or order) underlying the biophysicochemical processes generating long-tailed histograms that fit PDE. This new function has been named the Planckian information, IP, which (i) may be a new measure of order that can be applied widely to both natural and human sciences and (ii) can serve as the opposite of the Boltzmann-Gibbs entropy, S, which is a measure of disorder. The possible rationales for the universality of PDE may include (i) the universality of the wave-particle duality embedded in PDE, (ii) the selection of subsets of random processes (thereby breaking the symmetry of GLE) as the basic mechanism of generating order, organization, and function, and (iii) the quantity-quality complementarity as the connection between PDE and Peircean semiotics.

  17. Light meson gas in the QCD vacuum and oscillating universe

    NASA Astrophysics Data System (ADS)

    Prokhorov, George; Pasechnik, Roman

    2018-01-01

    We have developed a phenomenological effective quantum-field theoretical model describing the "hadron gas" of the lightest pseudoscalar mesons, scalar σ-meson and σ-vacuum, i.e. the expectation value of the σ-field, at finite temperatures. The corresponding thermodynamic approach was formulated in terms of the generating functional derived from the effective Lagrangian providing the basic thermodynamic information about the "meson plasma + QCD condensate" system. This formalism enables us to study the QCD transition from the hadron phase with direct implications for cosmological evolution. Using the hypothesis about a positively-definite QCD vacuum contribution stochastically produced in early universe, we show that the universe could undergo a series of oscillations during the QCD epoch before resuming unbounded expansion.

  18. A new method to calculate the beam charge for an integrating current transformer

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wu Yuchi; Han Dan; Zhu Bin

    2012-09-15

    The integrating current transformer (ICT) is a magnetic sensor widely used to precisely measure the charge of an ultra-short-pulse charged particle beam generated by traditional accelerators and new laser-plasma particle accelerators. In this paper, we present a new method to calculate the beam charge in an ICT based on circuit analysis. The output transfer function shows an invariable signal profile for an ultra-short electron bunch, so the function can be used to evaluate the signal quality and calculate the beam charge through signal fitting. We obtain a set of parameters in the output function from a standard signal generated bymore » an ultra-short electron bunch (about 1 ps in duration) at a radio frequency linear electron accelerator at Tsinghua University. These parameters can be used to obtain the beam charge by signal fitting with excellent accuracy.« less

  19. New technologies accelerate the exploration of non-coding RNAs in horticultural plants

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Liu, Degao; Mewalal, Ritesh; Hu, Rongbin

    Non-coding RNAs (ncRNAs), that is, RNAs not translated into proteins, are crucial regulators of a variety of biological processes in plants. While protein-encoding genes have been relatively well-annotated in sequenced genomes, accounting for a small portion of the genome space in plants, the universe of plant ncRNAs is rapidly expanding. Recent advances in experimental and computational technologies have generated a great momentum for discovery and functional characterization of ncRNAs. Here we summarize the classification and known biological functions of plant ncRNAs, review the application of next-generation sequencing (NGS) technology and ribosome profiling technology to ncRNA discovery in horticultural plants andmore » discuss the application of new technologies, especially the new genome-editing tool clustered regularly interspaced short palindromic repeat (CRISPR)/CRISPR-associated protein 9 (Cas9) systems, to functional characterization of plant ncRNAs.« less

  20. Advanced Techniques in Pulmonary Function Test Analysis Interpretation and Diagnosis

    PubMed Central

    Gildea, T.J.; Bell, C. William

    1980-01-01

    The Pulmonary Functions Analysis and Diagnostic System is an advanced clinical processing system developed for use at the Pulmonary Division, Department of Medicine at the University of Nebraska Medical Center. The system generates comparative results and diagnostic impressions for a variety of routine and specialized pulmonary functions test data. Routine evaluation deals with static lung volumes, breathing mechanics, diffusing capacity, and blood gases while specialized tests include lung compliance studies, small airways dysfunction studies and dead space to tidal volume ratios. Output includes tabular results of normal vs. observed values, clinical impressions and commentary and, where indicated, a diagnostic impression. A number of pulmonary physiological and state variables are entered or sampled (A to D) with periodic status reports generated for the test supervisor. Among the various physiological variables sampled are respiratory frequency, minute ventilation, oxygen consumption, carbon dioxide production, and arterial oxygen saturation.

  1. New technologies accelerate the exploration of non-coding RNAs in horticultural plants

    PubMed Central

    Liu, Degao; Mewalal, Ritesh; Hu, Rongbin; Tuskan, Gerald A; Yang, Xiaohan

    2017-01-01

    Non-coding RNAs (ncRNAs), that is, RNAs not translated into proteins, are crucial regulators of a variety of biological processes in plants. While protein-encoding genes have been relatively well-annotated in sequenced genomes, accounting for a small portion of the genome space in plants, the universe of plant ncRNAs is rapidly expanding. Recent advances in experimental and computational technologies have generated a great momentum for discovery and functional characterization of ncRNAs. Here we summarize the classification and known biological functions of plant ncRNAs, review the application of next-generation sequencing (NGS) technology and ribosome profiling technology to ncRNA discovery in horticultural plants and discuss the application of new technologies, especially the new genome-editing tool clustered regularly interspaced short palindromic repeat (CRISPR)/CRISPR-associated protein 9 (Cas9) systems, to functional characterization of plant ncRNAs. PMID:28698797

  2. Unseen disadvantage: how American universities' focus on independence undermines the academic performance of first-generation college students.

    PubMed

    Stephens, Nicole M; Fryberg, Stephanie A; Markus, Hazel Rose; Johnson, Camille S; Covarrubias, Rebecca

    2012-06-01

    American universities increasingly admit first-generation college students whose parents do not have 4-year degrees. Once admitted, these students tend to struggle academically, compared with continuing-generation students--students who have at least 1 parent with a 4-year degree. We propose a cultural mismatch theory that identifies 1 important source of this social class achievement gap. Four studies test the hypothesis that first-generation students underperform because interdependent norms from their mostly working-class backgrounds constitute a mismatch with middle-class independent norms prevalent in universities. First, assessing university cultural norms, surveys of university administrators revealed that American universities focus primarily on norms of independence. Second, identifying the hypothesized cultural mismatch, a longitudinal survey revealed that universities' focus on independence does not match first-generation students' relatively interdependent motives for attending college and that this cultural mismatch is associated with lower grades. Finally, 2 experiments at both private and public universities created a match or mismatch for first-generation students and examined the performance consequences. Together these studies revealed that representing the university culture in terms of independence (i.e., paving one's own paths) rendered academic tasks difficult and, thereby, undermined first-generation students' performance. Conversely, representing the university culture in terms of interdependence (i.e., being part of a community) reduced this sense of difficulty and eliminated the performance gap without adverse consequences for continuing-generation students. These studies address the urgent need to recognize cultural obstacles that contribute to the social class achievement gap and to develop interventions to address them. 2012 APA, all rights reserved

  3. Chemical strategies for pancreatic β cell differentiation, reprogramming, and regeneration.

    PubMed

    Ma, Xiaojie; Zhu, Saiyong

    2017-04-01

    Generation of unlimited functional pancreatic β cells is critical for the study of pancreatic biology and treatment of diabetes mellitus. Recent advances have suggested several promising directions, including directed differentiation of pancreatic β cells from pluripotent stem cells, reprogramming of pancreatic β cells from other types of somatic cells, and stimulated proliferation and enhanced functions of existing pancreatic β cells. Small molecules are useful in generating unlimited numbers of functional pancreatic cells in vitro and could be further developed as drugs to stimulate endogenous pancreatic regeneration. Here, we provide an updated summary of recent major achievements in pancreatic β cell differentiation, reprogramming, proliferation, and function. These studies will eventually lead to significant advances in the field of pancreatic biology and regeneration. © The Author 2017. Published by Oxford University Press on behalf of the Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  4. Fourth-generation spinal instrumentation: experience with adolescent idiopathic scoliosis at a tertiary care hospital in Pakistan

    PubMed Central

    Fazal, Akil; Lakdawala, Riaz H

    2012-01-01

    Objective To evaluate the radiological and functional outcome of surgical treatment of adolescent idiopathic scoliosis using fourth-generation posterior spinal instrumentation at The Aga Khan University, Karachi, Pakistan. Design Case series. Place and duration of study The Aga Khan University Hospital after a minimum of 2 years postoperatively. Patients and methods A total of 20 patients with adolescent idiopathic scoliosis were recruited into the study and evaluated for radiological and functional outcome. The study period was from 2000 to 2005. Radiological outcome was assessed using Cobb angle measurement pre and postoperatively, hence assessing percentage correction. The lower instrumented vertebra was taken as the neutral vertebra and the level was recorded. Functional outcome was determined using the Scoliosis Research Society patient administered questionnaire. All patients were called to the clinic and asked to fill in the form. Those patients who were out of the city were mailed the forms and requested via telephone to complete and return. Results Of the 20 patients operated on, twelve were female and eight were male. The average age at operation was 12.7 years. The mean Cobb angle was 69° preoperatively and 20° postoperatively, representing a percentage correction of 71%. The average duration of follow-up was 3.6 years. There was one major complication involving neurological injury post-op and two minor complications involving wound infection. The average Scoliosis Research Society score (on a scale of 1–5, with 5 being best) for pain was 4.5, self-image was 4.2, functional status was 4.1, mental status was 3.8, and satisfaction was 4.4. There was no relationship between the percentage correction of scoliosis and the functional outcome. Those patients with a high preoperative Cobb angle tended to have a better outcome for functional and mental status postoperatively. There was no relation between the lower instrumented vertebra and functional outcome. Conclusion In the correct indications, fourth-generation posterior instrumentation and fusion is a reliable and satisfactory technique to treat adolescent idiopathic scoliosis. PMID:22393301

  5. Basic needs of Universiti Utara Malaysia students

    NASA Astrophysics Data System (ADS)

    Ismail, Suzilah; Ahmad, Yuhaniz; Enn, Chang Tzu

    2017-11-01

    Basic needs are defined as goods or services that are essential for human to live and function. Wants on the other hand, are goods or services that are not necessary but we desire or wish for in order to fulfil our needs. In university, students' needs and wants are not always easily detectable due to different generations of students. The students' desires are also caused by peer interactions, course needs and cultural differences. For example older generations requires typewriter but new generations need a laptop. Many university students have difficulty to differentiate between basic needs and wants. This leads to financial management problem which can affect their academic performance. The purpose of this study is to identify students of Universiti Utara Malaysia (UUM) basic needs. Based on past studies conducted by 3 universities, 12 items related to students' basic needs were identified. However, only 9 items are considered relevant to UUM students. A study on a focus group consist of 18 students from different background was conducted to validate the 9 items of basic needs by using in depth interviews. The findings indicated food, clothing, books, stationery, photocopying, printing & binding, information & communication technology (ICT), mobile phone bills, transportation and others (which includes toiletries, groceries, sport, & entertainment) as the 9 items. The findings also revealed that student basic needs for ICT are not only laptop and printer but also a smartphone. As for clothing, requirements are different according to programs the student majors in. A business student need full business attire, law students need a proper robe for moot courts and curriculum activities require the students to be in uniform. These are basic needs and not desires or wants.

  6. How Am I Going to Pay for That?!: First-Generation University Students and Their Financial Concerns

    ERIC Educational Resources Information Center

    Shultz, Judith J. Andrews

    2013-01-01

    This study examines first-generation research-university students in relation to their financial considerations. It is driven by the question, What is the relationship between first-generation college-student status and financial considerations among research-university students? It explores the impact of such variables as first-generation student…

  7. Thiolation mediated pegylation platform to generate functional universal red blood cells.

    PubMed

    Nacharaju, Parimala; Manjula, Belur N; Acharya, Seetharama A

    2007-01-01

    The PEGylation that adds an extension arm on protein amino groups with the conservation of their positive charge masks the A and D antigens of erythrocytes efficiently. In the present study, the efficiency of masking the antigens of RBC by PEGylation protocols that do not conserve the charge with and without adding extension arms is compared. The conjugation of PEG-5000 to RBCs through the addition of extension arms masked the D antigen more efficiently than the other protocol. A combination of PEG-5 K and PEG-20 K is needed to mask the A antigen, irrespective of the PEGylation approach. The oxygen affinity of the PEGylated RBCs increased by the extension arm facilitated PEGylation. The protocol involving the conjugation of PEG-chains without adding extension arm did not alter the oxygen affinity of RBCs. A combination of PEGylation protocols is an alternate strategy to generate universal red blood cells with good levels of oxygen affinity.

  8. Bodies as Bearers of Value: The Transmission of Jock Culture via the "Twelve Commandments"

    ERIC Educational Resources Information Center

    Sparkes, Andrew C.; Partington, Elizabeth; Brown, David H. K.

    2007-01-01

    This article explores a number of insights generated from a three-year ethnographic study of one university setting in England in which a "jock culture" is seen to dominate a student campus. Drawing on core concepts from Pierre Bourdieu's sociology of culture, it illustrates the unique function of the body in sustaining jock culture…

  9. Analyzing comprehensive QoS with security constraints for services composition applications in wireless sensor networks.

    PubMed

    Xiong, Naixue; Wu, Zhao; Huang, Yannong; Xu, Degang

    2014-12-01

    Services composition is fundamental to software development in multi-service wireless sensor networks (WSNs). The quality of service (QoS) of services composition applications (SCAs) are confronted with severe challenges due to the open, dynamic, and complex natures of WSNs. Most previous research separated various QoS indices into different fields and studied them individually due to the computational complexity. This approach ignores the mutual influence between these QoS indices, and leads to a non-comprehensive and inaccurate analysis result. The universal generating function (UGF) shows the speediness and precision in QoS analysis. However, only one QoS index at a time can be analyzed by the classic UGF. In order to efficiently analyze the comprehensive QoS of SCAs, this paper proposes an improved UGF technique-vector universal generating function (VUGF)-which considers the relationship between multiple QoS indices, including security, and can simultaneously analyze multiple QoS indices. The numerical examples demonstrate that it can be used for the evaluation of the comprehensive QoS of SCAs subjected to the security constraint in WSNs. Therefore, it can be effectively applied to the optimal design of multi-service WSNs.

  10. Analyzing Comprehensive QoS with Security Constraints for Services Composition Applications in Wireless Sensor Networks

    PubMed Central

    Xiong, Naixue; Wu, Zhao; Huang, Yannong; Xu, Degang

    2014-01-01

    Services composition is fundamental to software development in multi-service wireless sensor networks (WSNs). The quality of service (QoS) of services composition applications (SCAs) are confronted with severe challenges due to the open, dynamic, and complex natures of WSNs. Most previous research separated various QoS indices into different fields and studied them individually due to the computational complexity. This approach ignores the mutual influence between these QoS indices, and leads to a non-comprehensive and inaccurate analysis result. The universal generating function (UGF) shows the speediness and precision in QoS analysis. However, only one QoS index at a time can be analyzed by the classic UGF. In order to efficiently analyze the comprehensive QoS of SCAs, this paper proposes an improved UGF technique—vector universal generating function (VUGF)—which considers the relationship between multiple QoS indices, including security, and can simultaneously analyze multiple QoS indices. The numerical examples demonstrate that it can be used for the evaluation of the comprehensive QoS of SCAs subjected to the security constraint in WSNs. Therefore, it can be effectively applied to the optimal design of multi-service WSNs. PMID:25470488

  11. Results from the Wilkinson Microwave Anisotropy Probe

    NASA Technical Reports Server (NTRS)

    Komatsu, E.; Bennett, Charles L.; Komatsu, Eiichiro

    2015-01-01

    The Wilkinson Microwave Anisotropy Probe (WMAP) mapped the distribution of temperature and polarization over the entire sky in five microwave frequency bands. These full-sky maps were used to obtain measurements of temperature and polarization anisotropy of the cosmic microwave background with the unprecedented accuracy and precision. The analysis of two-point correlation functions of temperature and polarization data gives determinations of the fundamental cosmological parameters such as the age and composition of the universe, as well as the key parameters describing the physics of inflation, which is further constrained by three-point correlation functions. WMAP observations alone reduced the flat ? cold dark matter (Lambda Cold Dark Matter) cosmological model (six) parameter volume by a factor of > 68, 000 compared with pre-WMAP measurements. The WMAP observations (sometimes in combination with other astrophysical probes) convincingly show the existence of non-baryonic dark matter, the cosmic neutrino background, flatness of spatial geometry of the universe, a deviation from a scale-invariant spectrum of initial scalar fluctuations, and that the current universe is undergoing an accelerated expansion. The WMAP observations provide the strongest ever support for inflation; namely, the structures we see in the universe originate from quantum fluctuations generated during inflation.

  12. Subgrid spatial variability of soil hydraulic functions for hydrological modelling

    NASA Astrophysics Data System (ADS)

    Kreye, Phillip; Meon, Günter

    2016-07-01

    State-of-the-art hydrological applications require a process-based, spatially distributed hydrological model. Runoff characteristics are demanded to be well reproduced by the model. Despite that, the model should be able to describe the processes at a subcatchment scale in a physically credible way. The objective of this study is to present a robust procedure to generate various sets of parameterisations of soil hydraulic functions for the description of soil heterogeneity on a subgrid scale. Relations between Rosetta-generated values of saturated hydraulic conductivity (Ks) and van Genuchten's parameters of soil hydraulic functions were statistically analysed. An universal function that is valid for the complete bandwidth of Ks values could not be found. After concentrating on natural texture classes, strong correlations were identified for all parameters. The obtained regression results were used to parameterise sets of hydraulic functions for each soil class. The methodology presented in this study is applicable on a wide range of spatial scales and does not need input data from field studies. The developments were implemented into a hydrological modelling system.

  13. The emergence of the galactic stellar mass function from a non-universal IMF in clusters

    NASA Astrophysics Data System (ADS)

    Dib, Sami; Basu, Shantanu

    2018-06-01

    We investigate the dependence of a single-generation galactic mass function (SGMF) on variations in the initial stellar mass functions (IMF) of stellar clusters. We show that cluster-to-cluster variations of the IMF lead to a multi-component SGMF where each component in a given mass range can be described by a distinct power-law function. We also show that a dispersion of ≈0.3 M⊙ in the characteristic mass of the IMF, as observed for young Galactic clusters, leads to a low-mass slope of the SGMF that matches the observed Galactic stellar mass function even when the IMFs in the low-mass end of individual clusters are much steeper.

  14. 3D Printing of Personalized Organs and Tissues

    NASA Astrophysics Data System (ADS)

    Ye, Kaiming

    2015-03-01

    Authors: Kaiming Ye and Sha Jin, Department of Biomedical Engineering, Watson School of Engineering and Applied Science, Binghamton University, State University of New York, Binghamton, NY 13902-6000 Abstract: Creation of highly organized multicellular constructs, including tissues and organs or organoids, will revolutionize tissue engineering and regenerative medicine. The development of these technologies will enable the production of individualized organs or tissues for patient-tailored organ transplantation or cell-based therapy. For instance, a patient with damaged myocardial tissues due to an ischemic event can receive a myocardial transplant generated using the patient's own induced pluripotent stem cells (iPSCs). Likewise, a type-1 diabetic patient can be treated with lab-generated islets to restore his or her physiological insulin secretion capability. These lab-produced, high order tissues or organs can also serve as disease models for pathophysiological study and drug screening. The remarkable advances in stem cell biology, tissue engineering, microfabrication, and materials science in the last decade suggest the feasibility of generating these tissues and organoids in the laboratory. Nevertheless, major challenges still exist. One of the critical challenges that we still face today is the difficulty in constructing or fabricating multicellular assemblies that recapitulate in vivo microenvironments essential for controlling cell proliferation, migration, differentiation, maturation and assembly into a biologically functional tissue or organoid structure. These challenges can be addressed through developing 3D organ and tissue printing which enables organizing and assembling cells into desired tissue and organ structures. We have shown that human pluripotent stem cells differentiated in 3D environments are mature and possess high degree of biological function necessary for them to function in vivo.

  15. A novel process of viral vector barcoding and library preparation enables high-diversity library generation and recombination-free paired-end sequencing

    PubMed Central

    Davidsson, Marcus; Diaz-Fernandez, Paula; Schwich, Oliver D.; Torroba, Marcos; Wang, Gang; Björklund, Tomas

    2016-01-01

    Detailed characterization and mapping of oligonucleotide function in vivo is generally a very time consuming effort that only allows for hypothesis driven subsampling of the full sequence to be analysed. Recent advances in deep sequencing together with highly efficient parallel oligonucleotide synthesis and cloning techniques have, however, opened up for entirely new ways to map genetic function in vivo. Here we present a novel, optimized protocol for the generation of universally applicable, barcode labelled, plasmid libraries. The libraries are designed to enable the production of viral vector preparations assessing coding or non-coding RNA function in vivo. When generating high diversity libraries, it is a challenge to achieve efficient cloning, unambiguous barcoding and detailed characterization using low-cost sequencing technologies. With the presented protocol, diversity of above 3 million uniquely barcoded adeno-associated viral (AAV) plasmids can be achieved in a single reaction through a process achievable in any molecular biology laboratory. This approach opens up for a multitude of in vivo assessments from the evaluation of enhancer and promoter regions to the optimization of genome editing. The generated plasmid libraries are also useful for validation of sequencing clustering algorithms and we here validate the newly presented message passing clustering process named Starcode. PMID:27874090

  16. Magnetic fields and chiral asymmetry in the early hot universe

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sydorenko, Maksym; Shtanov, Yuri; Tomalak, Oleksandr, E-mail: maxsydorenko@gmail.com, E-mail: tomalak@uni-mainz.de, E-mail: shtanov@bitp.kiev.ua

    In this paper, we study analytically the process of external generation and subsequent free evolution of the lepton chiral asymmetry and helical magnetic fields in the early hot universe. This process is known to be affected by the Abelian anomaly of the electroweak gauge interactions. As a consequence, chiral asymmetry in the fermion distribution generates magnetic fields of non-zero helicity, and vice versa. We take into account the presence of thermal bath, which serves as a seed for the development of instability in magnetic field in the presence of externally generated lepton chiral asymmetry. The developed helical magnetic field andmore » lepton chiral asymmetry support each other, considerably prolonging their mutual existence, in the process of 'inverse cascade' transferring magnetic-field power from small to large spatial scales. For cosmologically interesting initial conditions, the chiral asymmetry and the energy density of helical magnetic field are shown to evolve by scaling laws, effectively depending on a single combined variable. In this case, the late-time asymptotics of the conformal chiral chemical potential reproduces the universal scaling law previously found in the literature for the system under consideration. This regime is terminated at lower temperatures because of scattering of electrons with chirality change, which exponentially washes out chiral asymmetry. We derive an expression for the termination temperature as a function of the chiral asymmetry and energy density of helical magnetic field.« less

  17. Magnetic fields and chiral asymmetry in the early hot universe

    NASA Astrophysics Data System (ADS)

    Sydorenko, Maksym; Tomalak, Oleksandr; Shtanov, Yuri

    2016-10-01

    In this paper, we study analytically the process of external generation and subsequent free evolution of the lepton chiral asymmetry and helical magnetic fields in the early hot universe. This process is known to be affected by the Abelian anomaly of the electroweak gauge interactions. As a consequence, chiral asymmetry in the fermion distribution generates magnetic fields of non-zero helicity, and vice versa. We take into account the presence of thermal bath, which serves as a seed for the development of instability in magnetic field in the presence of externally generated lepton chiral asymmetry. The developed helical magnetic field and lepton chiral asymmetry support each other, considerably prolonging their mutual existence, in the process of `inverse cascade' transferring magnetic-field power from small to large spatial scales. For cosmologically interesting initial conditions, the chiral asymmetry and the energy density of helical magnetic field are shown to evolve by scaling laws, effectively depending on a single combined variable. In this case, the late-time asymptotics of the conformal chiral chemical potential reproduces the universal scaling law previously found in the literature for the system under consideration. This regime is terminated at lower temperatures because of scattering of electrons with chirality change, which exponentially washes out chiral asymmetry. We derive an expression for the termination temperature as a function of the chiral asymmetry and energy density of helical magnetic field.

  18. First person - Pawel Leznicki.

    PubMed

    2018-05-16

    First Person is a series of interviews with the first authors of a selection of papers published in Journal of Cell Science, helping early-career researchers promote themselves alongside their papers. Pawel Leznicki is the first author on 'Expansion of DUB functionality generated by alternative isoforms - USP35, a case study', published in Journal of Cell Science. Pawel conducted the research in this article while in Yogesh Kulathu's lab at the University of Dundee, UK. He is now a research associate in the lab of Stephen High at the University of Manchester, UK, investigating protein biogenesis processes and their quality control. © 2018. Published by The Company of Biologists Ltd.

  19. Breaking down Barriers: Academic Obstacles of First-Generation Students at Research Universities

    ERIC Educational Resources Information Center

    Stebleton, Michael J.; Soria, Krista M.

    2012-01-01

    The purpose of this study was to examine the perceived academic obstacles of first-generation students in comparison to non-first-generation students. Using the Student Experience in the Research University (SERU) completed by approximately 58,000 students from six research universities, the researchers used nonparametric bootstrapping to analyze…

  20. Polynomial functors and combinatorial Dyson-Schwinger equations

    NASA Astrophysics Data System (ADS)

    Kock, Joachim

    2017-04-01

    We present a general abstract framework for combinatorial Dyson-Schwinger equations, in which combinatorial identities are lifted to explicit bijections of sets, and more generally equivalences of groupoids. Key features of combinatorial Dyson-Schwinger equations are revealed to follow from general categorical constructions and universal properties. Rather than beginning with an equation inside a given Hopf algebra and referring to given Hochschild 1-cocycles, our starting point is an abstract fixpoint equation in groupoids, shown canonically to generate all the algebraic structures. Precisely, for any finitary polynomial endofunctor P defined over groupoids, the system of combinatorial Dyson-Schwinger equations X = 1 + P(X) has a universal solution, namely the groupoid of P-trees. The isoclasses of P-trees generate naturally a Connes-Kreimer-like bialgebra, in which the abstract Dyson-Schwinger equation can be internalised in terms of canonical B+-operators. The solution to this equation is a series (the Green function), which always enjoys a Faà di Bruno formula, and hence generates a sub-bialgebra isomorphic to the Faà di Bruno bialgebra. Varying P yields different bialgebras, and cartesian natural transformations between various P yield bialgebra homomorphisms and sub-bialgebras, corresponding for example to truncation of Dyson-Schwinger equations. Finally, all constructions can be pushed inside the classical Connes-Kreimer Hopf algebra of trees by the operation of taking core of P-trees. A byproduct of the theory is an interpretation of combinatorial Green functions as inductive data types in the sense of Martin-Löf type theory (expounded elsewhere).

  1. Evidence-based health policy: three generations of reform in Mexico.

    PubMed

    Frenk, Julio; Sepúlveda, Jaime; Gómez-Dantés, Octavio; Knaul, Felicia

    2003-11-15

    The Mexican health system has evolved through three generations of reform. The creation of the Ministry of Health and the main social security agency in 1943 marked the first generation of health reforms. In the late 1970s, a second generation of reforms was launched around the primary health-care model. Third-generation reforms favour systemic changes to reorganise the system through the horizontal integration of basic functions-stewardship, financing, and provision. The stability of leadership in the health sector is emphasised as a key element that allowed for reform during the past 60 years. Furthermore, there has been a transition in the second generation of reforms to a model that is increasingly based on evidence; this has been intensified and extended in the third generation of reforms. We also examine policy developments that will provide social protection in health for all. These developments could be of interest for countries seeking to provide their citizens with universal access to health care that incorporates equity, quality, and financial protection.

  2. [Isn't the heart the source of energy for blood circulation? "The heart doesn't know the basic laws of physics"].

    PubMed

    Papp, Lajos

    2008-08-03

    For hundreds of years, universal medical practice has depicted the heart to be the central organ, showing the heart's function as the primary source of energy for blood circulation, paying particular importance to the role of the heart valves. At present the generally accepted paradigm: the main force component of blood circulation is the pressure-gradient generated by the working heart. In serious combined illnesses of heart valves, the function of the valve is almost nonexistent. Based on the value of pressure in the chambers of the heart and in the great arteries and veins, blood flows from a place of high pressure to lower pressure, and should work the other way around as well. It is a fact, however, that even in such cases the circulation of blood is directed from the main arteries towards the veins: without the function of the valves--seemingly opposing the basic laws of physics--it keeps its original direction. Therefore we can justifiably infer that it isn't the work of the heart muscle that provides the source of energy for blood circulation. The heart has an essential function in the maintenance of blood circulation: pulse generation. The principal role of the heart is to generate pulses and not pressure.

  3. Propositions for the Analysis of Commutation Phenomena and Modeling of Universal Motors Using the State Function Method

    NASA Astrophysics Data System (ADS)

    Niwa, Yuta; Akiyama, Yuji; Naruta, Tomokazu

    We carried out FEM simulations for modeling ultra-high-speed universal motors by using the state function method and analyzed the phenomenon of commutator sparking, the characteristics of the air gap surface, and the contact condition or contact resistance of the brushes and commutator bars. Thus, we could quantitatively analyze commutator sparking and investigate the configuration of the iron core. The results of FEM analysis were used to develop a model for predicting the configuration of the iron core and for estimating the electromotive force generated by the transformer, armature reaction field, spark voltage, contact resistance between the rotating brushes, and changes in the gap permeance. The results of our simulation were experimental results. This confirmed the validity of our analysis method. Thus, an ultra-high-speed, high-capacity of 1.5kw motor rotating at 30,000rpm can be designed for use in vacuum cleaners.

  4. Coping Style, Job Burnout and Mental Health of University Teachers of the Millennial Generation

    ERIC Educational Resources Information Center

    Jian, Xiao-Rong; Du, Juan-Juan; Dong, Rui-Yuan

    2017-01-01

    At present, in social transition period of China, reform of higher education is in full swing, with workload, job difficulty of university teachers greatly increased than before. Plus unique values and personality characteristics of the Millennial Generation, mental health of university teachers of the Millennial Generation has aroused more and…

  5. Internally Generated Revenue (IGR) and Effectiveness of University Administration in Nigeria

    ERIC Educational Resources Information Center

    Ofoegbu, Felicia I.; Alonge, Hezekiah O.

    2016-01-01

    The purpose of the study was mainly to identify the major sources and utilization of internally generated financial revenue by Nigerian University administrators. The population of the study consisted of all the 102 university administrators from the seventeen Federal Universities in Southern Nigeria. Descriptive statistics and Pearson Product…

  6. Generation of Multiple Metadata Formats from a Geospatial Data Repository

    NASA Astrophysics Data System (ADS)

    Hudspeth, W. B.; Benedict, K. K.; Scott, S.

    2012-12-01

    The Earth Data Analysis Center (EDAC) at the University of New Mexico is partnering with the CYBERShARE and Environmental Health Group from the Center for Environmental Resource Management (CERM), located at the University of Texas, El Paso (UTEP), the Biodiversity Institute at the University of Kansas (KU), and the New Mexico Geo- Epidemiology Research Network (GERN) to provide a technical infrastructure that enables investigation of a variety of climate-driven human/environmental systems. Two significant goals of this NASA-funded project are: a) to increase the use of NASA Earth observational data at EDAC by various modeling communities through enabling better discovery, access, and use of relevant information, and b) to expose these communities to the benefits of provenance for improving understanding and usability of heterogeneous data sources and derived model products. To realize these goals, EDAC has leveraged the core capabilities of its Geographic Storage, Transformation, and Retrieval Engine (Gstore) platform, developed with support of the NSF EPSCoR Program. The Gstore geospatial services platform provides general purpose web services based upon the REST service model, and is capable of data discovery, access, and publication functions, metadata delivery functions, data transformation, and auto-generated OGC services for those data products that can support those services. Central to the NASA ACCESS project is the delivery of geospatial metadata in a variety of formats, including ISO 19115-2/19139, FGDC CSDGM, and the Proof Markup Language (PML). This presentation details the extraction and persistence of relevant metadata in the Gstore data store, and their transformation into multiple metadata formats that are increasingly utilized by the geospatial community to document not only core library catalog elements (e.g. title, abstract, publication data, geographic extent, projection information, and database elements), but also the processing steps used to generate derived modeling products. In particular, we discuss the generation and service delivery of provenance, or trace of data sources and analytical methods used in a scientific analysis, for archived data. We discuss the workflows developed by EDAC to capture end-to-end provenance, the storage model for those data in a delivery format independent data structure, and delivery of PML, ISO, and FGDC documents to clients requesting those products.

  7. Nanopore Kinetic Proofreading of DNA Sequences

    NASA Astrophysics Data System (ADS)

    Ling, Xinsheng Sean

    The concept of DNA sequencing using the time dependence of the nanopore ionic current was proposed in 1996 by Kasianowicz, Brandin, Branton, and Deamer (KBBD). The KBBD concept has generated tremendous amount interests in recent decade. In this talk, I will review the current understanding of the DNA ``translocation'' dynamics and how it can be described by Schrodinger's 1915 paper on first-passage-time distribution function. Schrodinger's distribution function can be used to give a rigorous criterion for achieving nanopore DNA sequencing which turns out to be identical to that of gel electrophoresis used by Sanger in the first-generation Sanger method. A nanopore DNA sequencing technology also requires discrimination of bases with high accuracies. I will describe a solid-state nanopore sandwich structure that can function as a proofreading device capable of discriminating between correct and incorrect hybridization probes with an accuracy rivaling that of high-fidelity DNA polymerases. The latest results from Nanjing will be presented. This work is supported by China 1000-Talent Program at Southeast University, Nanjing, China.

  8. Research and development of energy harvesting from vibrations and human motions (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Liao, Wei-Hsin

    2017-04-01

    Most of the ambient energy, which was regarded useless in the past, now is under the spotlight. With the rapid developments on low power electronics, future personal mobile devices and remote sensing systems might become self-powered by scavenging energy in different forms from their surroundings. Kinetic energy is one of the promising energy forms in our living environment, e.g., human motions and vibrations. We have proposed an energy flow to clarify the functions of piezoelectric energy harvesting, dissipation, and their effects on the structural damping of vibrating structures. Impedance modeling and analysis were performed. We have designed an improved self-powered switching interface for piezoelectric energy harvesting circuits. With electromagnetic transduction, we also proposed a knee-mounted energy harvester that could convert the mechanical power from knee joints into electricity during walking. On the other hand, we have developed magnetorheological (MR) fluid devices with multiple functions, including rotary actuators and linear dampers. Multifunctional rotary actuator was designed to integrate motor/generator part and MR fluids into a single device. The actuator could function as motor, generator, clutch and brake, with compact size and good energy efficiency. In addition, novel self-sensing MR dampers with power generation, so as to integrate the dynamic sensing, controllable damping and power generation functions, were developed and investigated. Prototypes were fabricated and tested. The developed actuators were promising for various applications. In this paper, related research in energy harvesting done at The Chinese University of Hong Kong and key results will be presented.

  9. Experiences with a generator tool for building clinical application modules.

    PubMed

    Kuhn, K A; Lenz, R; Elstner, T; Siegele, H; Moll, R

    2003-01-01

    To elaborate main system characteristics and relevant deployment experiences for the health information system (HIS) Orbis/OpenMed, which is in widespread use in Germany, Austria, and Switzerland. In a deployment phase of 3 years in a 1.200 bed university hospital, where the system underwent significant improvements, the system's functionality and its software design have been analyzed in detail. We focus on an integrated CASE tool for generating embedded clinical applications and for incremental system evolution. We present a participatory and iterative software engineering process developed for efficient utilization of such a tool. The system's functionality is comparable to other commercial products' functionality; its components are embedded in a vendor-specific application framework, and standard interfaces are being used for connecting subsystems. The integrated generator tool is a remarkable feature; it became a key factor of our project. Tool generated applications are workflow enabled and embedded into the overall data base schema. Rapid prototyping and iterative refinement are supported, so application modules can be adapted to the users' work practice. We consider tools supporting an iterative and participatory software engineering process highly relevant for health information system architects. The potential of a system to continuously evolve and to be effectively adapted to changing needs may be more important than sophisticated but hard-coded HIS functionality. More work will focus on HIS software design and on software engineering. Methods and tools are needed for quick and robust adaptation of systems to health care processes and changing requirements.

  10. Fc functional antibodies in humans with severe H7N9 and seasonal influenza

    PubMed Central

    Vanderven, Hillary A.; Liu, Lu; Ana-Sosa-Batiz, Fernanda; Nguyen, Thi H.O.; Wan, Yanmin; Hogarth, P. Mark; Tilmanis, Danielle; Parsons, Matthew S.; Hurt, Aeron C.; Davenport, Miles P.; Kotsimbos, Tom; Cheng, Allen C.; Kedzierska, Katherine; Zhang, Xiaoyan; Xu, Jianqing; Kent, Stephen J.

    2017-01-01

    BACKGROUND. Both seasonal and novel avian influenza viruses can result in severe infections requiring hospitalization. Anti-influenza antibodies (Abs) with Fc-mediated effector functions, such as Ab-dependent cellular cytotoxicity (ADCC), are of growing interest in control of influenza but have not previously been studied during severe human infections. As such, the objective of this study was to examine Fc-mediated Ab functions in humans hospitalized with influenza infection. METHODS. Serum Ab response was studied in subjects hospitalized with either pandemic H7N9 avian influenza virus in China (n = 18) or circulating seasonal influenza viruses in Melbourne, Australia (n = 16). Recombinant soluble Fc receptor dimer ELISAs, natural killer (NK) cell activation assays, and Ab-dependent killing assays with influenza-infected target cells were used to assess the Fc functionality of anti-influenza hemagglutinin (HA) Abs during severe human influenza infection. RESULTS. We found that the peak generation of Fc functional HA Abs preceded that of neutralizing Abs for both severe H7N9 and seasonal influenza infections. Subjects who succumbed to complications of H7N9 infection demonstrated reduced HA-specific Fc receptor–binding Abs (in magnitude and breadth) immediately prior to death compared with those who survived. Subjects who recovered from H7N9 and severe seasonal influenza infections demonstrated increased Fc receptor–binding Abs not only against the homologous infecting strain but against HAs from different influenza A subtypes. CONCLUSION. Collectively, survivors of severe influenza infection rapidly generate a functional Ab response capable of mediating ADCC against divergent influenza viruses. Broadly binding HA Abs with Fc-mediated functions may be a useful component of protective immunity to severe influenza infection. FUNDING. The National Health and Medical Research Council ([NHMRC] grants 1023294, 1041832, and 1071916), the Australian Department of Health, and the joint University of Melbourne/Fudan University International Research and Research Training Fund provided funding for this study. PMID:28679958

  11. Implementation of the Next Generation Attenuation (NGA) ground-motion prediction equations in Fortran and R

    USGS Publications Warehouse

    Kaklamanos, James; Boore, David M.; Thompson, Eric M.; Campbell, Kenneth W.

    2010-01-01

    Although these programs have been used by the U.S. Geological Survey (USGS), Tufts University, and others, no warranty, expressed or implied, is made by Tufts or the USGS as to the accuracy or functioning of the programs and related material, nor shall the fact of distribution constitute any such warranty, and no responsibility is assumed by Tufts or the USGS in connection therewith.

  12. Correlation analysis of 1 to 30 MeV celestial gamma rays

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Long, J.L.

    1984-01-01

    This paper outlines the development of a method of producing celestial sky maps from the data generated by the University of California, Riverside's double Compton scatter gamma ray telescope. The method makes use of a correlation between the telescope's data and theoretical calculated response functions. The results of applying this technique to northern hemisphere data obtained from a 1978 balloon flight from Palestine, Texas are included.

  13. Universal portfolios generated by weakly stationary processes

    NASA Astrophysics Data System (ADS)

    Tan, Choon Peng; Pang, Sook Theng

    2014-12-01

    Recently, a universal portfolio generated by a set of independent Brownian motions where a finite number of past stock prices are weighted by the moments of the multivariate normal distribution is introduced and studied. The multivariate normal moments as polynomials in time consequently lead to a constant rebalanced portfolio depending on the drift coefficients of the Brownian motions. For a weakly stationary process, a different type of universal portfolio is proposed where the weights on the stock prices depend only on the time differences of the stock prices. An empirical study is conducted on the returns achieved by the universal portfolios generated by the Ornstein-Uhlenbeck process on selected stock-price data sets. Promising results are demonstrated for increasing the wealth of the investor by using the weakly-stationary-process-generated universal portfolios.

  14. A universal quantum information processor for scalable quantum communication and networks

    PubMed Central

    Yang, Xihua; Xue, Bolin; Zhang, Junxiang; Zhu, Shiyao

    2014-01-01

    Entanglement provides an essential resource for quantum computation, quantum communication, and quantum networks. How to conveniently and efficiently realize the generation, distribution, storage, retrieval, and control of multipartite entanglement is the basic requirement for realistic quantum information processing. Here, we present a theoretical proposal to efficiently and conveniently achieve a universal quantum information processor (QIP) via atomic coherence in an atomic ensemble. The atomic coherence, produced through electromagnetically induced transparency (EIT) in the Λ-type configuration, acts as the QIP and has full functions of quantum beam splitter, quantum frequency converter, quantum entangler, and quantum repeater. By employing EIT-based nondegenerate four-wave mixing processes, the generation, exchange, distribution, and manipulation of light-light, atom-light, and atom-atom multipartite entanglement can be efficiently and flexibly achieved in a deterministic way with only coherent light fields. This method greatly facilitates the operations in quantum information processing, and holds promising applications in realistic scalable quantum communication and quantum networks. PMID:25316514

  15. Designing a low-cost pollution prevention plan to pay off at the University of Houston.

    PubMed

    Bialowas, Yurika Diaz; Sullivan, Emmett C; Schneller, Robert D

    2006-09-01

    The University of Houston is located just south of downtown Houston, TX. Many different chemical substances are used in scientific research and teaching activities throughout the campus. These activities generate a significant amount of waste materials that must be discarded as regulated hazardous waste per U.S. Environmental Protection Agency (EPA) rules. The Texas Commission on Environmental Quality (TCEQ) is the state regulatory agency that has enforcement authority for EPA hazardous waste rules in Texas. Currently, the University is classified as a large quantity generator and generates >1000 kg per month of hazardous waste. In addition, the University has experienced a major surge in research activities during the past several years, and overall the quantity of the hazardous waste generated has increased. The TCEQ requires large quantity generators to prepare a 5-yr Pollution Prevention (P2) Plan, which describes efforts to eliminate or minimize the amount of hazardous waste generated. This paper addresses the design and development of a low-cost P2 plan with minimal implementation obstacles and strong payoff potentials for the University. The projects identified can be implemented with existing University staff resources. This benefits the University by enhancing its environmental compliance efforts, and the disposal cost savings can be used for other purposes. Other educational institutions may benefit by undertaking a similar process.

  16. Biological adaptations for functional features of language in the face of cultural evolution.

    PubMed

    Christiansen, Morten H; Reali, Florencia; Chater, Nick

    2011-04-01

    Although there may be no true language universals, it is nonetheless possible to discern several family resemblance patterns across the languages of the world. Recent work on the cultural evolution of language indicates the source of these patterns is unlikely to be an innate universal grammar evolved through biological adaptations for arbitrary linguistic features. Instead, it has been suggested that the patterns of resemblance emerge because language has been shaped by the brain, with individual languages representing different but partially overlapping solutions to the same set of nonlinguistic constraints. Here, we use computational simulations to investigate whether biological adaptation for functional features of language, deriving from cognitive and communicative constraints, may nonetheless be possible alongside rapid cultural evolution. Specifically, we focus on the Baldwin effect as an evolutionary mechanism by which previously learned linguistic features might become innate through natural selection across many generations of language users. The results indicate that cultural evolution of language does not necessarily prevent functional features of language from becoming genetically fixed, thus potentially providing a particularly informative source of constraints on cross-linguistic resemblance patterns.

  17. Generative Topographic Mapping (GTM): Universal Tool for Data Visualization, Structure-Activity Modeling and Dataset Comparison.

    PubMed

    Kireeva, N; Baskin, I I; Gaspar, H A; Horvath, D; Marcou, G; Varnek, A

    2012-04-01

    Here, the utility of Generative Topographic Maps (GTM) for data visualization, structure-activity modeling and database comparison is evaluated, on hand of subsets of the Database of Useful Decoys (DUD). Unlike other popular dimensionality reduction approaches like Principal Component Analysis, Sammon Mapping or Self-Organizing Maps, the great advantage of GTMs is providing data probability distribution functions (PDF), both in the high-dimensional space defined by molecular descriptors and in 2D latent space. PDFs for the molecules of different activity classes were successfully used to build classification models in the framework of the Bayesian approach. Because PDFs are represented by a mixture of Gaussian functions, the Bhattacharyya kernel has been proposed as a measure of the overlap of datasets, which leads to an elegant method of global comparison of chemical libraries. Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  18. 40 CFR 262.101 - What is in this subpart?

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... definitions that apply to the University laboratories. It contains specific requirements for how to handle... (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University Laboratories XL Project... framework for a new management system for wastes that are generated in University laboratories. This...

  19. 40 CFR 262.101 - What is in this subpart?

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... definitions that apply to the University laboratories. It contains specific requirements for how to handle... (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University Laboratories XL Project... framework for a new management system for wastes that are generated in University laboratories. This...

  20. 40 CFR 262.101 - What is in this subpart?

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... definitions that apply to the University laboratories. It contains specific requirements for how to handle... (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University Laboratories XL Project... framework for a new management system for wastes that are generated in University laboratories. This...

  1. 40 CFR 262.101 - What is in this subpart?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... definitions that apply to the University laboratories. It contains specific requirements for how to handle... (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University Laboratories XL Project... framework for a new management system for wastes that are generated in University laboratories. This...

  2. University of Texas MD Anderson Cancer Center: High-Throughput Screening Identifying Driving Mutations in Endometrial Cancer | Office of Cancer Genomics

    Cancer.gov

    Recent advances in next-generation sequencing technology have enabled the unprecedented characterization of a full spectrum of somatic alterations in cancer genomes. Given the large numbers of somatic mutations typically detected by this approach, a key challenge in the downstream analysis is to distinguish “drivers” that functionally contribute to tumorigenesis from “passengers” that occur as the consequence of genomic instability.

  3. Free boundary skin current magnetohydrodynamic equilibria

    NASA Astrophysics Data System (ADS)

    Reusch, Michael F.

    1988-10-01

    Function theoretic methods in the complex plane are used to develop simple parametric hodograph formulas that generate sharp boundary equilibria of arbitrary shape. The related method of Gorenflo [Z. Angew. Math. Phys. 16, 279 (1965)] and Merkel (Ph.D. thesis, University of Munich, 1965) is discussed. A numerical technique for the construction of solutions, based on one of the methods, is presented. A study is made of the bifurcations of an equilibrium of general form.

  4. Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs.

    PubMed

    Yang, Jun-Bo; Li, De-Zhu; Li, Hong-Tao

    2014-09-01

    Chloroplast genomes supply indispensable information that helps improve the phylogenetic resolution and even as organelle-scale barcodes. Next-generation sequencing technologies have helped promote sequencing of complete chloroplast genomes, but compared with the number of angiosperms, relatively few chloroplast genomes have been sequenced. There are two major reasons for the paucity of completely sequenced chloroplast genomes: (i) massive amounts of fresh leaves are needed for chloroplast sequencing and (ii) there are considerable gaps in the sequenced chloroplast genomes of many plants because of the difficulty of isolating high-quality chloroplast DNA, preventing complete chloroplast genomes from being assembled. To overcome these obstacles, all known angiosperm chloroplast genomes available to date were analysed, and then we designed nine universal primer pairs corresponding to the highly conserved regions. Using these primers, angiosperm whole chloroplast genomes can be amplified using long-range PCR and sequenced using next-generation sequencing methods. The primers showed high universality, which was tested using 24 species representing major clades of angiosperms. To validate the functionality of the primers, eight species representing major groups of angiosperms, that is, early-diverging angiosperms, magnoliids, monocots, Saxifragales, fabids, malvids and asterids, were sequenced and assembled their complete chloroplast genomes. In our trials, only 100 mg of fresh leaves was used. The results show that the universal primer set provided an easy, effective and feasible approach for sequencing whole chloroplast genomes in angiosperms. The designed universal primer pairs provide a possibility to accelerate genome-scale data acquisition and will therefore magnify the phylogenetic resolution and species identification in angiosperms. © 2014 John Wiley & Sons Ltd.

  5. Dynamically avoiding fine-tuning the cosmological constant: the ``Relaxed Universe''

    NASA Astrophysics Data System (ADS)

    Bauer, Florian; Solà, Joan; Štefancić, Hrvoje

    2010-12-01

    We demonstrate that there exists a large class of Script F(R,Script G) action functionals of the scalar curvature and of the Gauß-Bonnet invariant which are able to relax dynamically a large cosmological constant (CC), whatever it be its starting value in the early universe. Hence, it is possible to understand, without fine-tuning, the very small current value Λ0 ~ H02 of the CC as compared to its theoretically expected large value in quantum field theory and string theory. In our framework, this relaxation appears as a pure gravitational effect, where no ad hoc scalar fields are needed. The action involves a positive power of a characteristic mass parameter, Script M, whose value can be, interestingly enough, of the order of a typical particle physics mass of the Standard Model of the strong and electroweak interactions or extensions thereof, including the neutrino mass. The model universe emerging from this scenario (the ``Relaxed Universe'') falls within the class of the so-called ΛXCDM models of the cosmic evolution. Therefore, there is a ``cosmon'' entity X (represented by an effective object, not a field), which in this case is generated by the effective functional Script F(R,Script G) and is responsible for the dynamical adjustment of the cosmological constant. This model universe successfully mimics the essential past epochs of the standard (or ``concordance'') cosmological model (ΛCDM). Furthermore, it provides interesting clues to the coincidence problem and it may even connect naturally with primordial inflation.

  6. Eisenstein type series for Calabi-Yau varieties

    NASA Astrophysics Data System (ADS)

    Movasati, Hossein

    2011-06-01

    In this article we introduce an ordinary differential equation associated to the one parameter family of Calabi-Yau varieties which is mirror dual to the universal family of smooth quintic three folds. It is satisfied by seven functions written in the q-expansion form and the Yukawa coupling turns out to be rational in these functions. We prove that these functions are algebraically independent over the field of complex numbers, and hence, the algebra generated by such functions can be interpreted as the theory of (quasi) modular forms attached to the one parameter family of Calabi-Yau varieties. Our result is a reformulation and realization of a problem of Griffiths around seventies on the existence of automorphic functions for the moduli of polarized Hodge structures. It is a generalization of the Ramanujan differential equation satisfied by three Eisenstein series.

  7. Holocaust Survivors' Memories of Past Trauma and the Functions of Reminiscence.

    PubMed

    O'Rourke, Norm; Canham, Sarah; Wertman, Annette; Chaudhury, Habib; Carmel, Sara; Bachner, Yaacov G; Peres, Hagit

    2016-08-01

    Existing research suggests that specific ways of recalling autobiographical memories of one's past cluster in self-positive, self-negative, and prosocial reminiscence functions. We undertook the present qualitative study to gain understanding of reminiscence functions as described by 269 Israeli Holocaust survivors and to see whether groupings of themes that emerged would correspond to our tripartite model of the reminiscence functions. Participants (M = 80.4 years; SD = 6.87) were asked to describe memories that typify a reminiscence function in which they frequently or very frequently engage. Thematic analyses were conducted in English (translated) and Hebrew. Responses reflect the range of ways in which Holocaust survivors reminisce. The task of describing early life memories was difficult for some participants, while others' lived experiences enabled them to teach others to ensure that their collective memory remains in the consciousness of the next generation of Israelis and the Jewish state. Data are imbued with examples of horror, resilience, generativity, and gratitude. As hypothesized, survivors' memories cluster in self-positive, self-negative, and prosocial groupings consistent with the tripartite model of reminiscence functions. © The Author 2015. Published by Oxford University Press on behalf of The Gerontological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  8. Stochastic dosimetry model for radon progeny in the rat lung.

    PubMed

    Winkler-HeiI, R; Hofmann, W; Hussain, M

    2014-07-01

    The stochastic dosimetry model presented here considers the distinctly asymmetric, stochastic branching pattern reported in morphometric measurements. This monopodial structure suggests that an airway diameter is a more appropriate morphometric parameter to classify bronchial dose distributions for inhaled radon progeny than the commonly assigned airway generation numbers. Bronchial doses were calculated for the typical exposure conditions reported for the Pacific Northwest National Laboratory rat inhalation studies, yielding an average bronchial dose of 7.75 mGy WLM(-1). If plotted as functions of airway generations, the resulting dose distributions are highest in the central bronchial airways, while significantly decreasing towards peripheral generations. However, if plotted as functions of airway diameters, doses are much more uniformly distributed among bronchial airways. The comparison between rat and human lungs indicates that dose conversion coefficients for the rat lung are higher than the corresponding values for the human lung by a factor of 1.34 for the experimental PNNL exposure conditions, and of 1.25 for typical human indoor conditions. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  9. Monte Carlo simulation of a photodisintegration of 3 H experiment in Geant4

    NASA Astrophysics Data System (ADS)

    Gray, Isaiah

    2013-10-01

    An upcoming experiment involving photodisintegration of 3 H at the High Intensity Gamma-Ray Source facility at Duke University has been simulated in the software package Geant4. CAD models of silicon detectors and wire chambers were imported from Autodesk Inventor using the program FastRad and the Geant4 GDML importer. Sensitive detectors were associated with the appropriate logical volumes in the exported GDML file so that changes in detector geometry will be easily manifested in the simulation. Probability distribution functions for the energy and direction of outgoing protons were generated using numerical tables from previous theory, and energies and directions were sampled from these distributions using a rejection sampling algorithm. The simulation will be a useful tool to optimize detector geometry, estimate background rates, and test data analysis algorithms. This work was supported by the Triangle Universities Nuclear Laboratory REU program at Duke University.

  10. New insights into the formation mechanism of Ag, Au and AgAu nanoparticles in aqueous alkaline media: alkoxides from alcohols, aldehydes and ketones as universal reducing agents.

    PubMed

    Gomes, Janaina F; Garcia, Amanda C; Ferreira, Eduardo B; Pires, Cleiton; Oliveira, Vanessa L; Tremiliosi-Filho, Germano; Gasparotto, Luiz H S

    2015-09-07

    In this report we present new insights into the formation mechanism of Ag, Au and AgAu nanoparticles with alcohols, aldehydes and ketones in alkaline medium at room temperature. We selected methanol, ethanol, glycerol, formaldehyde, acetaldehyde and acetone to demonstrate their capability of reducing gold and silver ions under the above-mentioned conditions. We showed that the particles are also formed with potassium tert-butoxide in the absence of hydroxides. Our results strongly suggest that alkoxides, formed from any molecule containing a hydroxyl or a functional group capable of generating them in alkaline medium, are the actual and universal reducing agent of silver and gold ions, in opposition to the currently accepted mechanisms. The universality of the reaction mechanism proposed in this work may impact on the production of noble nanoparticles with simple chemicals normally found in standard laboratories.

  11. [Use of an aerosol generator (Guard) to control injurious insects in forestry, agriculture, and medical disinsection].

    PubMed

    Abdraziakov, O N; Ermishev, Iu V; Levkov, P A

    2012-01-01

    The Guard aerosol generator is a universal multioperational device without a field-of-use restriction in the application of permitted chemical and biological substances, by combining the function of a controlled dispersion aerosol generator and a remote small- and large-drop sprayer in one mechanism and can use aerosol pesticides. The drop fractionation range is as follows: 3-50, 50-100, 100-300, and 200-400 microm for aerosol, dead water, small-drop, and large-drop spraying, respectively, with smooth and step control of working liquid drops. Treatment using the Guard generator has been shown to be highly effective against agricultural and forestry pests. This paper describes the advantages of the Guard sprayer over those of the conventional air and ground ones. The long-term use of the Guard generator to control mosquitoes and ticks in the Tyumen region could substantially improve the epidemiological situation of tick-borne infections and protect children's recreation centers from attacks of bloodsuckers.

  12. The Transient High-Energy Sky and Early Universe Surveyor (THESEUS)

    NASA Astrophysics Data System (ADS)

    Amati, L.; O'Brien, P.; Goetz, D.; Tenzer, C.; Bozzo, E.

    2017-10-01

    The Transient High Energy Sky and Early Universe Surveyor (THESEUS) is a mission concept developed by a large international collaboration aimed at exploiting Gamma-Ray Bursts for investigating the early Universe. The main scientic objectives of THESEUS, currently under evaluation by ESA within the selection process for next M5 mission, include: investigating the star formation rate and metallicity evolution of the ISM and IGM up to redshift 10, detecting the first generation (pop III) of stars, studying the sources and physics of re-ionization, detecting the faint end of galaxies luminosity function. These goals will be achieved through a unique combination of instruments allowing GRB detection and arcmin localization over a broad FOV (more than 1sr) and an energy band extending from several MeVs down to 0.3 keV with unprecedented sensitivity, as well as on-board prompt (few minutes) follow-up with a 0.7m class IR telescope with both imaging and spectroscopic capabilities. Such instrumentation will also allow THESEUS to perform a monitoring of the X-ray sky with unprecedented sensitivity, which will provide a perfect service and sinergy to next generation multi-wavalength (e.g., E-ELT, SKA, CTA, ATHENA) and multi-messenger (aLIGO, aVIRGO, eLISA, ET, neutrino detectors, ...) facilities.

  13. The constraints satisfaction problem approach in the design of an architectural functional layout

    NASA Astrophysics Data System (ADS)

    Zawidzki, Machi; Tateyama, Kazuyoshi; Nishikawa, Ikuko

    2011-09-01

    A design support system with a new strategy for finding the optimal functional configurations of rooms for architectural layouts is presented. A set of configurations satisfying given constraints is generated and ranked according to multiple objectives. The method can be applied to problems in architectural practice, urban or graphic design-wherever allocation of related geometrical elements of known shape is optimized. Although the methodology is shown using simplified examples-a single story residential building with two apartments each having two rooms-the results resemble realistic functional layouts. One example of a practical size problem of a layout of three apartments with a total of 20 rooms is demonstrated, where the generated solution can be used as a base for a realistic architectural blueprint. The discretization of design space is discussed, followed by application of a backtrack search algorithm used for generating a set of potentially 'good' room configurations. Next the solutions are classified by a machine learning method (FFN) as 'proper' or 'improper' according to the internal communication criteria. Examples of interactive ranking of the 'proper' configurations according to multiple criteria and choosing 'the best' ones are presented. The proposed framework is general and universal-the criteria, parameters and weights can be individually defined by a user and the search algorithm can be adjusted to a specific problem.

  14. Plethystic vertex operators and boson-fermion correspondences

    NASA Astrophysics Data System (ADS)

    Fauser, Bertfried; Jarvis, Peter D.; King, Ronald C.

    2016-10-01

    We study the algebraic properties of plethystic vertex operators, introduced in (2010 J. Phys. A: Math. Theor. 43 405202), underlying the structure of symmetric functions associated with certain generalized universal character rings of subgroups of the general linear group, defined to stabilize tensors of Young symmetry type characterized by a partition of arbitrary shape π. Here we establish an extension of the well-known boson-fermion correspondence involving Schur functions and their associated (Bernstein) vertex operators: for each π, the modes generated by the plethystic vertex operators and their suitably constructed duals, satisfy the anticommutation relations of a complex Clifford algebra. The combinatorial manipulations underlying the results involve exchange identities exploiting the Hopf-algebraic structure of certain symmetric function series and their plethysms.

  15. Classes of exact Einstein Maxwell solutions

    NASA Astrophysics Data System (ADS)

    Komathiraj, K.; Maharaj, S. D.

    2007-12-01

    We find new classes of exact solutions to the Einstein Maxwell system of equations for a charged sphere with a particular choice of the electric field intensity and one of the gravitational potentials. The condition of pressure isotropy is reduced to a linear, second order differential equation which can be solved in general. Consequently we can find exact solutions to the Einstein Maxwell field equations corresponding to a static spherically symmetric gravitational potential in terms of hypergeometric functions. It is possible to find exact solutions which can be written explicitly in terms of elementary functions, namely polynomials and product of polynomials and algebraic functions. Uncharged solutions are regainable with our choice of electric field intensity; in particular we generate the Einstein universe for particular parameter values.

  16. Revenue Generation and Organisational Change in Higher Education: Insights from Canada

    ERIC Educational Resources Information Center

    Eastman, Julia Antonia

    2006-01-01

    This paper reports on a study of four major Canadian universities' strategies for generating revenue in the face of prolonged cutbacks. The universities are placed on a continuum of higher education funding, institutional types and organisational attributes. The study produced new hypotheses about how universities' organisational attributes change…

  17. [Dinitrosyl iron complexes are endogenous signaling agents in animal and human cells and tissues (a hypothesis)].

    PubMed

    Vanin, A F

    2004-01-01

    The hypothesis was advanced that dinitrosyl iron complexes generated in animal and human cells and tissues producing nitric oxide can function as endogenous universal regulators of biochemical and physiological processes. This function is realized by the ability of dinitrosyl iron complexes to act as donors of free nitric oxide molecules interacting with the heme groups of proteins, nitrosonium ions, or Fe+(NO+)2 interacting with the thiol groups of proteins. The effect of dinitrosyl iron complexes on the activity of some enzymes and the expression of the genome at the translation and transcription levels was considered.

  18. Thermal characteristics of second harmonic generation by phase matched calorimetry.

    PubMed

    Lim, Hwan Hong; Kurimura, Sunao; Noguchi, Keisuke; Shoji, Ichiro

    2014-07-28

    We analyze a solution of the heat equation for second harmonic generation (SHG) with a focused Gaussian beam and simulate the temperature rise in SHG materials as a function of the second harmonic power and the focusing conditions. We also propose a quantitative value of the heat removal performance of SHG devices, referred to as the effective heat capacity Cα in phase matched calorimetry. We demonstrate the inverse relation between Cα and the focusing parameter ξ, and propose the universal quantity of the product of Cα and ξ for characterizing the thermal property of SHG devices. Finally, we discuss the strategy to manage thermal dephasing in SHG using the results from simulations.

  19. Modular implementation of a digital hardware design automation system

    NASA Astrophysics Data System (ADS)

    Masud, M.

    An automation system based on AHPL (A Hardware Programming Language) was developed. The project may be divided into three distinct phases: (1) Upgrading of AHPL to make it more universally applicable; (2) Implementation of a compiler for the language; and (3) illustration of how the compiler may be used to support several phases of design activities. Several new features were added to AHPL. These include: application-dependent parameters, mutliple clocks, asynchronous results, functional registers and primitive functions. The new language, called Universal AHPL, has been defined rigorously. The compiler design is modular. The parsing is done by an automatic parser generated from the SLR(1)BNF grammar of the language. The compiler produces two data bases from the AHPL description of a circuit. The first one is a tabular representation of the circuit, and the second one is a detailed interconnection linked list. The two data bases provide a means to interface the compiler to application-dependent CAD systems.

  20. Brane with variable tension as a possible solution to the problem of the late cosmic acceleration

    NASA Astrophysics Data System (ADS)

    García-Aspeitia, Miguel A.; Hernandez-Almada, A.; Magaña, Juan; Amante, Mario H.; Motta, V.; Martínez-Robles, C.

    2018-05-01

    Braneworld models have been proposed as a possible solution to the problem of the accelerated expansion of the Universe. The idea is to dispense the dark energy (DE) and drive the late-time cosmic acceleration with a five-dimensional geometry. We investigate a brane model with variable brane tension as a function of redshift called chrono-brane. We propose the polynomial λ =(1 +z )n function inspired in tracker-scalar-field potentials. To constrain the n exponent we use the latest observational Hubble data from cosmic chronometers, Type Ia Supernovae from the full joint-light-analysis sample, baryon acoustic oscillations and the posterior distance from the cosmic microwave background of Planck 2015 measurements. A joint analysis of these data estimates n ≃6.19 ±0.12 which generates a DE-like (cosmological-constantlike at late times) term, in the Friedmann equation arising from the extra dimensions. This model is consistent with these data and can drive the Universe to an accelerated phase at late times.

  1. University of Texas MD Anderson Cancer Center (UT-MDACC): High-Throughput Screening Identifying Driving Mutations in Endometrial Cancer | Office of Cancer Genomics

    Cancer.gov

    Recent advances in next-generation sequencing technology have enabled the unprecedented characterization of a full spectrum of somatic alterations in cancer genomes. Given the large numbers of somatic mutations typically detected by this approach, a key challenge in the downstream analysis is to distinguish “drivers” that functionally contribute to tumorigenesis from “passengers” that occur as the consequence of genomic instability.

  2. Tachyon with an inverse power-law potential in a braneworld cosmology

    NASA Astrophysics Data System (ADS)

    Bilić, Neven; Domazet, Silvije; Djordjevic, Goran S.

    2017-08-01

    We study a tachyon cosmological model based on the dynamics of a 3-brane in the bulk of the second Randall-Sundrum model extended to more general warp functions. A well known prototype of such a generalization is the bulk with a selfinteracting scalar field. As a consequence of a generalized bulk geometry the cosmology on the observer brane is modified by the scale dependent four-dimensional gravitational constant. In particular, we study a power law warp factor which generates an inverse power-law potential V\\propto \\varphi-n of the tachyon field φ. We find a critical power n cr that divides two subclasses with distinct asymptotic behaviors: a dust universe for n>n_cr and a quasi de Sitter universe for 0.

  3. First-Generation Students' Academic Engagement and Retention

    ERIC Educational Resources Information Center

    Soria, Krista M.; Stebleton, Michael J.

    2012-01-01

    This study investigates differences in academic engagement and retention between first-generation and non-first-generation undergraduate students. Utilizing the Student Experience in the Research University survey of 1864 first-year students at a large, public research university located in the United States, this study finds that first-generation…

  4. Next Generation Sequencing at the University of Chicago Genomics Core

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Faber, Pieter

    2013-04-24

    The University of Chicago Genomics Core provides University of Chicago investigators (and external clients) access to State-of-the-Art genomics capabilities: next generation sequencing, Sanger sequencing / genotyping and micro-arrays (gene expression, genotyping, and methylation). The current presentation will highlight our capabilities in the area of ultra-high throughput sequencing analysis.

  5. Water Recycling in Schools & Universities

    ERIC Educational Resources Information Center

    Meeten, Nick

    2013-01-01

    Consider the waste streams generated in schools and universities. So what is in the typical used water generated in schools and universities? It is typically about 99 percent water, with the remaining 1 percent mainly made up of organic compounds. Used water contains nutrients such as nitrogen and phosphorous. When one judges it on its quality, it…

  6. Comparison of electronic health record system functionalities to support the patient recruitment process in clinical trials.

    PubMed

    Schreiweis, Björn; Trinczek, Benjamin; Köpcke, Felix; Leusch, Thomas; Majeed, Raphael W; Wenk, Joachim; Bergh, Björn; Ohmann, Christian; Röhrig, Rainer; Dugas, Martin; Prokosch, Hans-Ulrich

    2014-11-01

    Reusing data from electronic health records for clinical and translational research and especially for patient recruitment has been tackled in a broader manner since about a decade. Most projects found in the literature however focus on standalone systems and proprietary implementations at one particular institution often for only one singular trial and no generic evaluation of EHR systems for their applicability to support the patient recruitment process does yet exist. Thus we sought to assess whether the current generation of EHR systems in Germany provides modules/tools, which can readily be applied for IT-supported patient recruitment scenarios. We first analysed the EHR portfolio implemented at German University Hospitals and then selected 5 sites with five different EHR implementations covering all major commercial systems applied in German University Hospitals. Further, major functionalities required for patient recruitment support have been defined and the five sample EHRs and their standard tools have been compared to the major functionalities. In our analysis of the site's hospital information system environments (with four commercial EHR systems and one self-developed system) we found that - even though no dedicated module for patient recruitment has been provided - most EHR products comprise generic tools such as workflow engines, querying capabilities, report generators and direct SQL-based database access which can be applied as query modules, screening lists and notification components for patient recruitment support. A major limitation of all current EHR products however is that they provide no dedicated data structures and functionalities for implementing and maintaining a local trial registry. At the five sites with standard EHR tools the typical functionalities of the patient recruitment process could be mostly implemented. However, no EHR component is yet directly dedicated to support research requirements such as patient recruitment. We recommend for future developments that EHR customers and vendors focus much more on the provision of dedicated patient recruitment modules. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

  7. Genetic Interaction Maps in Escherichia coli Reveal Functional Crosstalk among Cell Envelope Biogenesis Pathways

    PubMed Central

    Vlasblom, James; Gagarinova, Alla; Phanse, Sadhna; Graham, Chris; Yousif, Fouad; Ding, Huiming; Xiong, Xuejian; Nazarians-Armavil, Anaies; Alamgir, Md; Ali, Mehrab; Pogoutse, Oxana; Pe'er, Asaf; Arnold, Roland; Michaut, Magali; Parkinson, John; Golshani, Ashkan; Whitfield, Chris; Wodak, Shoshana J.; Moreno-Hagelsieb, Gabriel; Greenblatt, Jack F.; Emili, Andrew

    2011-01-01

    As the interface between a microbe and its environment, the bacterial cell envelope has broad biological and clinical significance. While numerous biosynthesis genes and pathways have been identified and studied in isolation, how these intersect functionally to ensure envelope integrity during adaptive responses to environmental challenge remains unclear. To this end, we performed high-density synthetic genetic screens to generate quantitative functional association maps encompassing virtually the entire cell envelope biosynthetic machinery of Escherichia coli under both auxotrophic (rich medium) and prototrophic (minimal medium) culture conditions. The differential patterns of genetic interactions detected among >235,000 digenic mutant combinations tested reveal unexpected condition-specific functional crosstalk and genetic backup mechanisms that ensure stress-resistant envelope assembly and maintenance. These networks also provide insights into the global systems connectivity and dynamic functional reorganization of a universal bacterial structure that is both broadly conserved among eubacteria (including pathogens) and an important target. PMID:22125496

  8. Genetic interaction maps in Escherichia coli reveal functional crosstalk among cell envelope biogenesis pathways.

    PubMed

    Babu, Mohan; Díaz-Mejía, J Javier; Vlasblom, James; Gagarinova, Alla; Phanse, Sadhna; Graham, Chris; Yousif, Fouad; Ding, Huiming; Xiong, Xuejian; Nazarians-Armavil, Anaies; Alamgir, Md; Ali, Mehrab; Pogoutse, Oxana; Pe'er, Asaf; Arnold, Roland; Michaut, Magali; Parkinson, John; Golshani, Ashkan; Whitfield, Chris; Wodak, Shoshana J; Moreno-Hagelsieb, Gabriel; Greenblatt, Jack F; Emili, Andrew

    2011-11-01

    As the interface between a microbe and its environment, the bacterial cell envelope has broad biological and clinical significance. While numerous biosynthesis genes and pathways have been identified and studied in isolation, how these intersect functionally to ensure envelope integrity during adaptive responses to environmental challenge remains unclear. To this end, we performed high-density synthetic genetic screens to generate quantitative functional association maps encompassing virtually the entire cell envelope biosynthetic machinery of Escherichia coli under both auxotrophic (rich medium) and prototrophic (minimal medium) culture conditions. The differential patterns of genetic interactions detected among > 235,000 digenic mutant combinations tested reveal unexpected condition-specific functional crosstalk and genetic backup mechanisms that ensure stress-resistant envelope assembly and maintenance. These networks also provide insights into the global systems connectivity and dynamic functional reorganization of a universal bacterial structure that is both broadly conserved among eubacteria (including pathogens) and an important target.

  9. Expansion of genetic testing in the division of functional genomics, research center for bioscience and technology, tottori university from 2000 to 2013.

    PubMed

    Adachi, Kaori

    2014-03-01

    At the Division of Functional Genomics, Research Center for Bioscience and Technology, Tottori University, we have been making an effort to establish a genetic testing facility that can provide the same screening procedures conducted worldwide. Direct Sequencing of PCR products is the main method to detect point mutations, small deletions and insertions. Multiplex Ligation-dependent Probe Amplification (MLPA) was used to detect large deletions or insertions. Expansion of the repeat was analyzed for triplet repeat diseases. Original primers were constructed for 41 diseases when the reported primers failed to amplify the gene. Prediction of functional effects of human nsSNPs (PolyPhen) was used for evaluation of novel mutations. From January 2000 to September 2013, a total of 1,006 DNA samples were subjected to genetic testing in the Division of Functional Genomics, Research Center for Bioscience and Technology, Tottori University. The hospitals that requested genetic testing were located in 43 prefectures in Japan and in 11 foreign countries. The genetic testing covered 62 diseases, and mutations were detected in 287 out of 1,006 with an average mutation detection rate of 24.7%. There were 77 samples for prenatal diagnosis. The number of samples has rapidly increased since 2010. In 2013, the next-generation sequencers were introduced in our facility and are expected to provide more comprehensive genetic testing in the near future. Nowadays, genetic testing is a popular and powerful tool for diagnosis of many genetic diseases. Our genetic testing should be further expanded in the future.

  10. Topological Defects and Structures in the Early Universe

    NASA Astrophysics Data System (ADS)

    Zhu, Yong

    1997-08-01

    This thesis discusses the topological defects generated in the early universe and their contributions to cosmic structure formation. First, we investigate non-Gaussian isocurvature perturbations generated by the evolution of Goldstone modes during inflation. If a global symmetry is broken before inflation, the resulting Goldstone modes are disordered during inflation in a precise and predictable way. After inflation these Goldstone modes order themselves in a self-similar way, much as Goldstone modes in field ordering scenarios based on the Kibble mechanism. For (Hi2/Mpl2)~10- 6, through their gravitational interaction these Goldstone modes generate density perturbations of approximately the right magnitude to explain the cosmic microwave background (CMB) anisotropy and seed the structure seen in the universe today. In such a model non-Gaussian perturbations result because to lowest order density perturbations are sourced by products of Gaussian fields. We explore the issue of phase dispersion and conclude that this non-Gaussian model predicts Doppler peaks in the CMB anisotropy. Topological defects generated from quantum fluctuations during inflation are studied in chapter four. We present a calculation of the power spectrum generated in a classically symmetry-breaking O(N) scalar field through inflationary quantum fluctuations, using the large-N limit. The effective potential of the theory in de Sitter space is obtained from a gap equation which is exact at large N. Quantum fluctuations restore the O(N) symmetry in de Sitter space, but for the finite values of N of interest, there is symmetry breaking and phase ordering after inflation, described by the classical nonlinear sigma model. The scalar field power spectrum is obtained as a function of the scalar field self-coupling. In the second part of the thesis, we investigate non-Abelian topological worm-holes, obtained when winding number one texture field is coupled to Einstein gravity with a conserved global charge. This topological wormhole has the same Euclidean action as axion wormholes and charged scalar wormholes. We find that free topological wormholes are spontaneously generated in the Euclidean space-time with finite density. It is then shown that wormholes with finite density might destroy any long range order in the global fields.

  11. Influence of COMT genotype and affective distractors on the processing of self-generated thought.

    PubMed

    Kilford, Emma J; Dumontheil, Iroise; Wood, Nicholas W; Blakemore, Sarah-Jayne

    2015-06-01

    The catechol-O-methyltransferase (COMT) enzyme is a major determinant of prefrontal dopamine levels. The Val(158)Met polymorphism affects COMT enzymatic activity and has been associated with variation in executive function and affective processing. This study investigated the effect of COMT genotype on the flexible modulation of the balance between processing self-generated and processing stimulus-oriented information, in the presence or absence of affective distractors. Analyses included 124 healthy adult participants, who were also assessed on standard working memory (WM) tasks. Relative to Val carriers, Met homozygotes made fewer errors when selecting and manipulating self-generated thoughts. This effect was partly accounted for by an association between COMT genotype and visuospatial WM performance. We also observed a complex interaction between the influence of affective distractors, COMT genotype and sex on task accuracy: male, but not female, participants showed a sensitivity to the affective distractors that was dependent on COMT genotype. This was not accounted for by WM performance. This study provides novel evidence of the role of dopaminergic genetic variation on the ability to select and manipulate self-generated thoughts. The results also suggest sexually dimorphic effects of COMT genotype on the influence of affective distractors on executive function. © The Author (2014). Published by Oxford University Press.

  12. Design and FPGA Implementation of a Universal Chaotic Signal Generator Based on the Verilog HDL Fixed-Point Algorithm and State Machine Control

    NASA Astrophysics Data System (ADS)

    Qiu, Mo; Yu, Simin; Wen, Yuqiong; Lü, Jinhu; He, Jianbin; Lin, Zhuosheng

    In this paper, a novel design methodology and its FPGA hardware implementation for a universal chaotic signal generator is proposed via the Verilog HDL fixed-point algorithm and state machine control. According to continuous-time or discrete-time chaotic equations, a Verilog HDL fixed-point algorithm and its corresponding digital system are first designed. In the FPGA hardware platform, each operation step of Verilog HDL fixed-point algorithm is then controlled by a state machine. The generality of this method is that, for any given chaotic equation, it can be decomposed into four basic operation procedures, i.e. nonlinear function calculation, iterative sequence operation, iterative values right shifting and ceiling, and chaotic iterative sequences output, each of which corresponds to only a state via state machine control. Compared with the Verilog HDL floating-point algorithm, the Verilog HDL fixed-point algorithm can save the FPGA hardware resources and improve the operation efficiency. FPGA-based hardware experimental results validate the feasibility and reliability of the proposed approach.

  13. A 50 kilowatt distributed grid-connected photovoltaic generation system for the University of Wyoming

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chowdhury, B.H.; Muknahallipatna, S.; Cupal, J.J.

    The University of Wyoming (UW) campus is serving as the site for a 50 kilowatt solar photovoltaic (PV) system. Three sub-systems were sited and built on the UW campus in 1996. The first sub-system, a 10 kW roof-integrated system of PV roof tiles is located on the roof of the Engineering building. The second sub-system--a 5 kW rack-mounted, ballasted PV system is on a walkway roof of the Engineering building. The third sub-system is a 35 kW shade structure system and located adjacent to the parking lot of the university`s football stadium. The three sub-systems differ in their design strategymore » since each is being used for research and education at the university. Each sub-system, being located at some distance away from one another, supplies a different part of the campus grid. Efforts continue at setting up a central monitoring system which will receive data remotely from all locations. A part of this monitoring system is complete. While the initial monitoring data shows satisfactory performance, a number of reliability problems with PV modules and inverters have delayed full functionality of the system.« less

  14. A Different World: African American, First Generation College Women at a Selective University

    ERIC Educational Resources Information Center

    Johnson, Jennifer Michelle

    2013-01-01

    The purpose of this study was to gain a better understanding of the academic and social experiences of African American, first generation college students attending a selective university. Following interpretive case study methodology, the major research questions guiding this study were: How do African American, first generation college students…

  15. Human and Server Docking Prediction for CAPRI Round 30–35 Using LZerD with Combined Scoring Functions

    PubMed Central

    Peterson, Lenna X.; Kim, Hyungrae; Esquivel-Rodriguez, Juan; Roy, Amitava; Han, Xusi; Shin, Woong-Hee; Zhang, Jian; Terashi, Genki; Lee, Matt; Kihara, Daisuke

    2016-01-01

    We report the performance of protein-protein docking predictions by our group for recent rounds of the Critical Assessment of Prediction of Interactions (CAPRI), a community-wide assessment of state-of-the-art docking methods. Our prediction procedure uses a protein-protein docking program named LZerD developed in our group. LZerD represents a protein surface with 3D Zernike descriptors (3DZD), which are based on a mathematical series expansion of a 3D function. The appropriate soft representation of protein surface with 3DZD makes the method more tolerant to conformational change of proteins upon docking, which adds an advantage for unbound docking. Docking was guided by interface residue prediction performed with BindML and cons-PPISP as well as literature information when available. The generated docking models were ranked by a combination of scoring functions, including PRESCO, which evaluates the native-likeness of residues’ spatial environments in structure models. First, we discuss the overall performance of our group in the CAPRI prediction rounds and investigate the reasons for unsuccessful cases. Then, we examine the performance of several knowledge-based scoring functions and their combinations for ranking docking models. It was found that the quality of a pool of docking models generated by LZerD, i.e. whether or not the pool includes near-native models, can be predicted by the correlation of multiple scores. Although the current analysis used docking models generated by LZerD, findings on scoring functions are expected to be universally applicable to other docking methods. PMID:27654025

  16. Gain-of-function mutagenesis approaches in rice for functional genomics and improvement of crop productivity.

    PubMed

    Moin, Mazahar; Bakshi, Achala; Saha, Anusree; Dutta, Mouboni; Kirti, P B

    2017-07-01

    The epitome of any genome research is to identify all the existing genes in a genome and investigate their roles. Various techniques have been applied to unveil the functions either by silencing or over-expressing the genes by targeted expression or random mutagenesis. Rice is the most appropriate model crop for generating a mutant resource for functional genomic studies because of the availability of high-quality genome sequence and relatively smaller genome size. Rice has syntenic relationships with members of other cereals. Hence, characterization of functionally unknown genes in rice will possibly provide key genetic insights and can lead to comparative genomics involving other cereals. The current review attempts to discuss the available gain-of-function mutagenesis techniques for functional genomics, emphasizing the contemporary approach, activation tagging and alterations to this method for the enhancement of yield and productivity of rice. © The Author 2017. Published by Oxford University Press. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  17. Different Patterns of Student-Faculty Interaction in Research Universities: An Analysis by Student Gender, Race, SES, and First-Generation Status. A Student Experience in the Research University (SERU) Project Research Paper. Research & Occasional Paper Series: CSHE.10.07

    ERIC Educational Resources Information Center

    Kim, Young K.; Sax, Linda J.

    2007-01-01

    This study examined the conditional effects of student-faculty interaction in a large research university system, based on various student characteristics including gender, race, and socio-economic and first-generation status. The study utilized data from the 2006 University of California Undergraduate Experience Survey (UCUES), a longitudinal…

  18. Neutron response function characterization of 4He scintillation detectors

    DOE PAGES

    Kelley, Ryan P.; Rolison, Lucas M.; Lewis, Jason M.; ...

    2015-04-15

    Time-of-flight measurements were conducted to characterize the neutron energy response of pressurized 4He fast neutron scintillation detectors for the first time, using the Van de Graaff generator at Ohio University. The time-of-flight spectra and pulse height distributions were measured. This data was used to determine the light output response function, which was found to be linear at energies below 3.5 MeV. The intrinsic efficiency of the detector as a function of incident energy was also calculated: the average efficiency up to 10 MeV was 3.1%, with a maximum efficiency of 6.6% at 1.05 MeV. Furthermore, these results will enable developmentmore » of neutron spectrum unfolding algorithms for neutron spectroscopy applications with these detectors.« less

  19. Geometry of quantum Hall states: Gravitational anomaly and transport coefficients

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Can, Tankut, E-mail: tcan@scgp.stonybrook.edu; Laskin, Michael; Wiegmann, Paul B.

    2015-11-15

    We show that universal transport coefficients of the fractional quantum Hall effect (FQHE) can be understood as a response to variations of spatial geometry. Some transport properties are essentially governed by the gravitational anomaly. We develop a general method to compute correlation functions of FQH states in a curved space, where local transformation properties of these states are examined through local geometric variations. We introduce the notion of a generating functional and relate it to geometric invariant functionals recently studied in geometry. We develop two complementary methods to study the geometry of the FQHE. One method is based on iteratingmore » a Ward identity, while the other is based on a field theoretical formulation of the FQHE through a path integral formalism.« less

  20. Smart campus: Data on energy generation costs from distributed generation systems of electrical energy in a Nigerian University.

    PubMed

    Okeniyi, Joshua O; Atayero, Aderemi A; Popoola, Segun I; Okeniyi, Elizabeth T; Alalade, Gbenga M

    2018-04-01

    This data article presents comparisons of energy generation costs from gas-fired turbine and diesel-powered systems of distributed generation type of electrical energy in Covenant University, Ota, Nigeria, a smart university campus driven by Information and Communication Technologies (ICT). Cumulative monthly data of the energy generation costs, for consumption in the institution, from the two modes electric power, which was produced at locations closed to the community consuming the energy, were recorded for the period spanning January to December 2017. By these, energy generation costs from the turbine system proceed from the gas-firing whereas the generation cost data from the diesel-powered generator also include data on maintenance cost for this mode of electrical power generation. These energy generation cost data that were presented in tables and graphs employ descriptive probability distribution and goodness-of-fit tests of statistical significance as the methods for the data detailing and comparisons. Information details from this data of energy generation costs are useful for furthering research developments and aiding energy stakeholders and decision-makers in the formulation of policies on energy generation modes, economic valuation in terms of costing and management for attaining energy-efficient/smart educational environment.

  1. Reconfigurable logic via gate controlled domain wall trajectory in magnetic network structure

    PubMed Central

    Murapaka, C.; Sethi, P.; Goolaup, S.; Lew, W. S.

    2016-01-01

    An all-magnetic logic scheme has the advantages of being non-volatile and energy efficient over the conventional transistor based logic devices. In this work, we present a reconfigurable magnetic logic device which is capable of performing all basic logic operations in a single device. The device exploits the deterministic trajectory of domain wall (DW) in ferromagnetic asymmetric branch structure for obtaining different output combinations. The programmability of the device is achieved by using a current-controlled magnetic gate, which generates a local Oersted field. The field generated at the magnetic gate influences the trajectory of the DW within the structure by exploiting its inherent transverse charge distribution. DW transformation from vortex to transverse configuration close to the output branch plays a pivotal role in governing the DW chirality and hence the output. By simply switching the current direction through the magnetic gate, two universal logic gate functionalities can be obtained in this device. Using magnetic force microscopy imaging and magnetoresistance measurements, all basic logic functionalities are demonstrated. PMID:26839036

  2. Pathways to Thriving: First- and Continuing Generation College Student Experiences at Two Elite Universities

    ERIC Educational Resources Information Center

    Gable, Rachel Lyn

    2016-01-01

    In this longitudinal interview-based study, I explore the self-assessed preparation, academic experiences, and social experiences of one ninety-one first-generation and thirty-five continuing generation (those with at least one parent a college graduate) students attending Harvard College and Georgetown University between the years of 2012-2016.…

  3. Generativity in Older Age: A Challenge for Universities of the Third Age (U3A)

    ERIC Educational Resources Information Center

    Villar, Feliciano; Celdran, Montserrat

    2012-01-01

    This paper discusses the ways in which university programs for older people should change to cater to the interests and concerns of generative older people. We describe university programs offered at present, underlining their emphasis on personal growth and on learning for the sake of learning. We argue that these programs are not entirely…

  4. Recombinational Cloning Using Gateway and In-Fusion Cloning Schemes

    PubMed Central

    Throop, Andrea L.; LaBaer, Joshua

    2015-01-01

    The comprehensive study of protein structure and function, or proteomics, depends on the obtainability of full-length cDNAs in species-specific expression vectors and subsequent functional analysis of the expressed protein. Recombinational cloning is a universal cloning technique based on site-specific recombination that is independent of the insert DNA sequence of interest, which differentiates this method from the classical restriction enzyme-based cloning methods. Recombinational cloning enables rapid and efficient parallel transfer of DNA inserts into multiple expression systems. This unit summarizes strategies for generating expression-ready clones using the most popular recombinational cloning technologies, including the commercially available Gateway® (Life Technologies) and In-Fusion® (Clontech) cloning technologies. PMID:25827088

  5. Active DNA gels

    NASA Astrophysics Data System (ADS)

    Saleh, Omar A.; Fygenson, Deborah K.; Bertrand, Olivier J. N.; Park, Chang Young

    2013-02-01

    Research into the mechanics and fluctuations of living cells has revealed the key role played by the cytoskeleton, a gel of stiff filaments driven out of equilibrium by force-generating motor proteins. Inspired by the extraordinary mechanical functions that the cytoskeleton imparts to the cell, we sought to create an artificial gel with similar characteristics. We identified DNA, and DNA-based motor proteins, as functional counterparts to the constituents of the cytoskeleton. We used DNA selfassembly to create a gel, and characterized its fluctuations and mechanics both before and after activation by the motor. We found that certain aspects of the DNA gel quantitatively match those of cytoskeletal networks, indicating the universal features of motor-driven, non-equilibrium networks.

  6. Use of information and communication technologies for teaching physics at the Technical University

    NASA Astrophysics Data System (ADS)

    Polezhaev, V. D.; Polezhaeva, L. N.; Kamenev, V. V.

    2017-01-01

    The paper discusses the ways to improve methods and algorithms of the automated control of knowledge, approaches to the establishment and effective functioning of electronic teaching complexes, which include tests of a new generation, and their use is not limited control purpose only. Possibilities of computer-based testing system SCIENTIA are presented. This system is a tool to automate the control of knowledge that can be used for the assessment and monitoring of students' knowledge in different types of exams, self-control of students' knowledge, making test materials, creating a unified database of tests on a wide range of subjects etc. Successful operation of informational system is confirmed in practice during the study of the course of physics by students at Technical University.

  7. Universal coverage challenges require health system approaches; the case of India.

    PubMed

    Duran, Antonio; Kutzin, Joseph; Menabde, Nata

    2014-02-01

    This paper uses the case of India to demonstrate that Universal Health Coverage (UHC) is about not only health financing; personal and population services production issues, stewardship of the health system and generation of the necessary resources and inputs need to accompany the health financing proposals. In order to help policy makers address UHC in India and sort out implementation issues, the framework developed by the World Health Organization (WHO) in the World Health Report 2000 and its subsequent extensions are advocated. The framework includes final goals, generic intermediate objectives and four inter-dependent functions which interact as a system; it can be useful by diagnosing current shortcomings and facilitating the filling up of gaps between functions and goals. Different positions are being defended in India re the preconditions for UHC to succeed. This paper argues that more (public) money will be important, but not enough; it needs to be supplemented with broad interventions at various health system levels. The paper analyzes some of the most important issues in relation to the functions of service production, generation of inputs and the necessary stewardship. It also pays attention to reform implementation, as different from its design, and suggests critical aspects emanating from a review of recent health system reforms. Precisely because of the lack of comparative reference for India, emphasis is made on the need to accompany implementation with analysis, so that the "solutions" ("what to do?", "how to do it?") are found through policy analysis and research embedded into flexible implementation. Strengthening "evidence-to-policy" links and the intelligence dimension of stewardship/leadership as well as accountability during implementation are considered paramount. Countries facing similar challenges to those faced by India can also benefit from the above approaches. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

  8. The Fully-Functioning University and Its Higher Education

    ERIC Educational Resources Information Center

    Bourner, Tom; Heath, Linda; Rospigliosi, Pericles

    2013-01-01

    In 2008 an article in this journal introduced the concept of a "fully-functioning university". This new article explores the sort of higher education (HE) that such a university would offer. It starts by examining the idea of a fully-functioning university and its relationship with the "tripartite mission" of a university. In…

  9. Scaling universality at the dynamic vortex Mott transition

    DOE PAGES

    Lankhorst, M.; Poccia, N.; Stehno, M. P.; ...

    2018-01-17

    The cleanest way to observe a dynamic Mott insulator-to-metal transition (DMT) without the interference from disorder and other effects inherent to electronic and atomic systems, is to employ the vortex Mott states formed by superconducting vortices in a regular array of pinning sites. Here, we report the critical behavior of the vortex system as it crosses the DMT line, driven by either current or temperature. We find universal scaling with respect to both, expressed by the same scaling function and characterized by a single critical exponent coinciding with the exponent for the thermodynamic Mott transition. We develop a theory formore » the DMT based on the parity reflection-time reversal (PT) symmetry breaking formalism and find that the nonequilibrium-induced Mott transition has the same critical behavior as the thermal Mott transition. Our findings demonstrate the existence of physical systems in which the effect of a nonequilibrium drive is to generate an effective temperature and hence the transition belonging in the thermal universality class.« less

  10. Scaling universality at the dynamic vortex Mott transition

    NASA Astrophysics Data System (ADS)

    Lankhorst, M.; Poccia, N.; Stehno, M. P.; Galda, A.; Barman, H.; Coneri, F.; Hilgenkamp, H.; Brinkman, A.; Golubov, A. A.; Tripathi, V.; Baturina, T. I.; Vinokur, V. M.

    2018-01-01

    The cleanest way to observe a dynamic Mott insulator-to-metal transition (DMT) without the interference from disorder and other effects inherent to electronic and atomic systems, is to employ the vortex Mott states formed by superconducting vortices in a regular array of pinning sites. Here, we report the critical behavior of the vortex system as it crosses the DMT line, driven by either current or temperature. We find universal scaling with respect to both, expressed by the same scaling function and characterized by a single critical exponent coinciding with the exponent for the thermodynamic Mott transition. We develop a theory for the DMT based on the parity reflection-time reversal (P T ) symmetry breaking formalism and find that the nonequilibrium-induced Mott transition has the same critical behavior as the thermal Mott transition. Our findings demonstrate the existence of physical systems in which the effect of a nonequilibrium drive is to generate an effective temperature and hence the transition belonging in the thermal universality class.

  11. Pathways to Success at a Historically Black College and University: An Examination of the Experiences of First Generation African American Male Students

    ERIC Educational Resources Information Center

    Andrews, Curdedra N.

    2017-01-01

    Over the past two decades First Generation African American (FGAA) males have been underrepresented in America's colleges and universities. Nearly 67% of those enrolled, specifically at Historically Black Colleges and Universities (HBCUs), have failed to obtain a 4-year degree. Therefore, I utilized a phenomenological design with Astin, Spady,…

  12. Student User Preferences for Features of Next-Generation OPACs: A Case Study of University of Sheffield International Students

    ERIC Educational Resources Information Center

    Tam, Winnie; Cox, Andrew M.; Bussey, Andy

    2009-01-01

    Purpose: The purpose of this paper is to identify the features that international student users prefer for next generation OPACs. Design/methodology/approach: A total of 16 international students of the University of Sheffield were interviewed in July 2008 to explore their preferences among potential features in next generation OPACs. A…

  13. The Universality of Self-Generated Verbal Mediators as a Means of Enhancing Memory Processes. Research Report No. 58.

    ERIC Educational Resources Information Center

    Buium, Nissan; Turnure, James E.

    In a replication of a similar study with American children, 56 normal native Israeli children (5-years-old) were studied to determine the universality of self-generated verbal mediators as a means of enhancing memory processes. Eight Ss, randomly selected, were assigned in each of the following conditions: labeling, sentence generation, listening…

  14. PDBStat: a universal restraint converter and restraint analysis software package for protein NMR.

    PubMed

    Tejero, Roberto; Snyder, David; Mao, Binchen; Aramini, James M; Montelione, Gaetano T

    2013-08-01

    The heterogeneous array of software tools used in the process of protein NMR structure determination presents organizational challenges in the structure determination and validation processes, and creates a learning curve that limits the broader use of protein NMR in biology. These challenges, including accurate use of data in different data formats required by software carrying out similar tasks, continue to confound the efforts of novices and experts alike. These important issues need to be addressed robustly in order to standardize protein NMR structure determination and validation. PDBStat is a C/C++ computer program originally developed as a universal coordinate and protein NMR restraint converter. Its primary function is to provide a user-friendly tool for interconverting between protein coordinate and protein NMR restraint data formats. It also provides an integrated set of computational methods for protein NMR restraint analysis and structure quality assessment, relabeling of prochiral atoms with correct IUPAC names, as well as multiple methods for analysis of the consistency of atomic positions indicated by their convergence across a protein NMR ensemble. In this paper we provide a detailed description of the PDBStat software, and highlight some of its valuable computational capabilities. As an example, we demonstrate the use of the PDBStat restraint converter for restrained CS-Rosetta structure generation calculations, and compare the resulting protein NMR structure models with those generated from the same NMR restraint data using more traditional structure determination methods. These results demonstrate the value of a universal restraint converter in allowing the use of multiple structure generation methods with the same restraint data for consensus analysis of protein NMR structures and the underlying restraint data.

  15. PDBStat: A Universal Restraint Converter and Restraint Analysis Software Package for Protein NMR

    PubMed Central

    Tejero, Roberto; Snyder, David; Mao, Binchen; Aramini, James M.; Montelione, Gaetano T

    2013-01-01

    The heterogeneous array of software tools used in the process of protein NMR structure determination presents organizational challenges in the structure determination and validation processes, and creates a learning curve that limits the broader use of protein NMR in biology. These challenges, including accurate use of data in different data formats required by software carrying out similar tasks, continue to confound the efforts of novices and experts alike. These important issues need to be addressed robustly in order to standardize protein NMR structure determination and validation. PDBStat is a C/C++ computer program originally developed as a universal coordinate and protein NMR restraint converter. Its primary function is to provide a user-friendly tool for interconverting between protein coordinate and protein NMR restraint data formats. It also provides an integrated set of computational methods for protein NMR restraint analysis and structure quality assessment, relabeling of prochiral atoms with correct IUPAC names, as well as multiple methods for analysis of the consistency of atomic positions indicated by their convergence across a protein NMR ensemble. In this paper we provide a detailed description of the PDBStat software, and highlight some of its valuable computational capabilities. As an example, we demonstrate the use of the PDBStat restraint converter for restrained CS-Rosetta structure generation calculations, and compare the resulting protein NMR structure models with those generated from the same NMR restraint data using more traditional structure determination methods. These results demonstrate the value of a universal restraint converter in allowing the use of multiple structure generation methods with the same restraint data for consensus analysis of protein NMR structures and the underlying restraint data. PMID:23897031

  16. A novel approach to locomotion learning: Actor-Critic architecture using central pattern generators and dynamic motor primitives.

    PubMed

    Li, Cai; Lowe, Robert; Ziemke, Tom

    2014-01-01

    In this article, we propose an architecture of a bio-inspired controller that addresses the problem of learning different locomotion gaits for different robot morphologies. The modeling objective is split into two: baseline motion modeling and dynamics adaptation. Baseline motion modeling aims to achieve fundamental functions of a certain type of locomotion and dynamics adaptation provides a "reshaping" function for adapting the baseline motion to desired motion. Based on this assumption, a three-layer architecture is developed using central pattern generators (CPGs, a bio-inspired locomotor center for the baseline motion) and dynamic motor primitives (DMPs, a model with universal "reshaping" functions). In this article, we use this architecture with the actor-critic algorithms for finding a good "reshaping" function. In order to demonstrate the learning power of the actor-critic based architecture, we tested it on two experiments: (1) learning to crawl on a humanoid and, (2) learning to gallop on a puppy robot. Two types of actor-critic algorithms (policy search and policy gradient) are compared in order to evaluate the advantages and disadvantages of different actor-critic based learning algorithms for different morphologies. Finally, based on the analysis of the experimental results, a generic view/architecture for locomotion learning is discussed in the conclusion.

  17. A novel approach to locomotion learning: Actor-Critic architecture using central pattern generators and dynamic motor primitives

    PubMed Central

    Li, Cai; Lowe, Robert; Ziemke, Tom

    2014-01-01

    In this article, we propose an architecture of a bio-inspired controller that addresses the problem of learning different locomotion gaits for different robot morphologies. The modeling objective is split into two: baseline motion modeling and dynamics adaptation. Baseline motion modeling aims to achieve fundamental functions of a certain type of locomotion and dynamics adaptation provides a “reshaping” function for adapting the baseline motion to desired motion. Based on this assumption, a three-layer architecture is developed using central pattern generators (CPGs, a bio-inspired locomotor center for the baseline motion) and dynamic motor primitives (DMPs, a model with universal “reshaping” functions). In this article, we use this architecture with the actor-critic algorithms for finding a good “reshaping” function. In order to demonstrate the learning power of the actor-critic based architecture, we tested it on two experiments: (1) learning to crawl on a humanoid and, (2) learning to gallop on a puppy robot. Two types of actor-critic algorithms (policy search and policy gradient) are compared in order to evaluate the advantages and disadvantages of different actor-critic based learning algorithms for different morphologies. Finally, based on the analysis of the experimental results, a generic view/architecture for locomotion learning is discussed in the conclusion. PMID:25324773

  18. Characterizations of the Formation of Polydopamine-Coated Halloysite Nanotubes in Various pH Environments.

    PubMed

    Feng, Junran; Fan, Hailong; Zha, Dao-An; Wang, Le; Jin, Zhaoxia

    2016-10-11

    Recent studies demonstrated that polydopamine (PDA) coating is universal to nearly all substrates, and it endows substrates with biocompatibility, postfunctionality, and other useful properties. Surface chemistry of PDA coating is important for its postmodifications and applications. However, there is less understanding of the formation mechanism and surface functional groups of PDA layers generated in different conditions. Halloysite is a kind of clay mineral with tubular nanostructure. Water-swellable halloysite has unique reactivity. In this study, we have investigated the reaction of dopamine in the presence of water-swellable halloysite. We have tracked the reaction progresses in different pH environments by using UV-vis spectroscopy and surface-enhanced Raman spectroscopy (SERS). The surface properties of PDA on halloysite were clarified by X-ray photoelectron spectroscopy (XPS), SERS, Fourier transform infrared (FTIR) characterizations, zeta potential, surface wettability, and morphological characterizations. We noticed that the interaction between halloysite surface and dopamine strongly influences the surface functionality of coated PDA. In addition, pH condition further modulates surface functional groups, resulting in less content of secondary/aromatic amine in PDA generated in weak acidic environment. This study demonstrates that the formation mechanism of polydopamine becomes complex in the presence of inorganic nanomaterials. Substrate property and reaction condition dominate the functionality of obtained PDA together.

  19. A versatile system for rapid multiplex genome-edited CAR T cell generation

    PubMed Central

    Ren, Jiangtao; Zhang, Xuhua; Liu, Xiaojun; Fang, Chongyun; Jiang, Shuguang; June, Carl H.; Zhao, Yangbing

    2017-01-01

    The therapeutic potential of CRISPR system has already been demonstrated in many instances and begun to overlap with the rapidly expanding field of cancer immunotherapy, especially on the production of genetically modified T cell receptor or chimeric antigen receptor (CAR) T cells. Efficient genomic disruption of multiple gene loci to generate universal donor cells, as well as potent effector T cells resistant to multiple inhibitory pathways such as PD-1 and CTLA4 is an attractive strategy for cell therapy. In this study, we accomplished rapid and efficient multiplex genomic editing, and re-directing T cells with antigen specific CAR via a one-shot CRISPR protocol by incorporation of multiple gRNAs in a CAR lentiviral vector. High efficient double knockout of endogenous TCR and HLA class I could be easily achieved to generate allogeneic universal CAR T cells. We also generated Fas-resistant universal CAR T cells by triple gene disruption. Simultaneous gene editing of four gene loci using the one-shot CRISPR protocol to generate allogeneic universal T cells deficient of both PD1 and CTLA-4 was also attempted. PMID:28199983

  20. Clinicians' adherence to clinical practice guidelines for cardiac function monitoring during antipsychotic treatment: a retrospective report on 434 patients with severe mental illness.

    PubMed

    Manchia, Mirko; Firinu, Giorgio; Carpiniello, Bernardo; Pinna, Federica

    2017-03-31

    Severe mental illness (SMI) has considerable excess morbidity and mortality, a proportion of which is explained by cardiovascular diseases, caused in part by antipsychotic (AP) induced QT-related arrhythmias and sudden death by Torsade de Point (TdP). The implementation of evidence-based recommendations for cardiac function monitoring might reduce the incidence of these AP-related adverse events. To investigate clinicians' adherence to cardiac function monitoring before and after starting AP, we performed a retrospective assessment of 434 AP-treated SMI patients longitudinally followed-up for 5 years at an academic community mental health center. We classified antipsychotics according to their risk of inducing QT-related arrhythmias and TdP (Center for Research on Therapeutics, University of Arizona). We used univariate tests and multinomial or binary logistic regression model for data analysis. Univariate and multinomial regression analysis showed that psychiatrists were more likely to perform pre-treatment electrocardiogram (ECG) and electrolyte testing with AP carrying higher cardiovascular risk, but not on the basis of AP pharmacological class. Univariate and binomial regression analysis showed that cardiac function parameters (ECG and electrolyte balance) were more frequently monitored during treatment with second generation AP than with first generation AP. Our data show the presence of weaknesses in the cardiac function monitoring of AP-treated SMI patients, and might guide future interventions to tackle them.

  1. GenoBase: comprehensive resource database of Escherichia coli K-12.

    PubMed

    Otsuka, Yuta; Muto, Ai; Takeuchi, Rikiya; Okada, Chihiro; Ishikawa, Motokazu; Nakamura, Koichiro; Yamamoto, Natsuko; Dose, Hitomi; Nakahigashi, Kenji; Tanishima, Shigeki; Suharnan, Sivasundaram; Nomura, Wataru; Nakayashiki, Toru; Aref, Walid G; Bochner, Barry R; Conway, Tyrrell; Gribskov, Michael; Kihara, Daisuke; Rudd, Kenneth E; Tohsato, Yukako; Wanner, Barry L; Mori, Hirotada

    2015-01-01

    Comprehensive experimental resources, such as ORFeome clone libraries and deletion mutant collections, are fundamental tools for elucidation of gene function. Data sets by omics analysis using these resources provide key information for functional analysis, modeling and simulation both in individual and systematic approaches. With the long-term goal of complete understanding of a cell, we have over the past decade created a variety of clone and mutant sets for functional genomics studies of Escherichia coli K-12. We have made these experimental resources freely available to the academic community worldwide. Accordingly, these resources have now been used in numerous investigations of a multitude of cell processes. Quality control is extremely important for evaluating results generated by these resources. Because the annotation has been changed since 2005, which we originally used for the construction, we have updated these genomic resources accordingly. Here, we describe GenoBase (http://ecoli.naist.jp/GB/), which contains key information about comprehensive experimental resources of E. coli K-12, their quality control and several omics data sets generated using these resources. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

  2. Generative mechanistic explanation building in undergraduate molecular and cellular biology

    NASA Astrophysics Data System (ADS)

    Southard, Katelyn M.; Espindola, Melissa R.; Zaepfel, Samantha D.; Bolger, Molly S.

    2017-09-01

    When conducting scientific research, experts in molecular and cellular biology (MCB) use specific reasoning strategies to construct mechanistic explanations for the underlying causal features of molecular phenomena. We explored how undergraduate students applied this scientific practice in MCB. Drawing from studies of explanation building among scientists, we created and applied a theoretical framework to explore the strategies students use to construct explanations for 'novel' biological phenomena. Specifically, we explored how students navigated the multi-level nature of complex biological systems using generative mechanistic reasoning. Interviews were conducted with introductory and upper-division biology students at a large public university in the United States. Results of qualitative coding revealed key features of students' explanation building. Students used modular thinking to consider the functional subdivisions of the system, which they 'filled in' to varying degrees with mechanistic elements. They also hypothesised the involvement of mechanistic entities and instantiated abstract schema to adapt their explanations to unfamiliar biological contexts. Finally, we explored the flexible thinking that students used to hypothesise the impact of mutations on multi-leveled biological systems. Results revealed a number of ways that students drew mechanistic connections between molecules, functional modules (sets of molecules with an emergent function), cells, tissues, organisms and populations.

  3. Optimizing high performance computing workflow for protein functional annotation.

    PubMed

    Stanberry, Larissa; Rekepalli, Bhanu; Liu, Yuan; Giblock, Paul; Higdon, Roger; Montague, Elizabeth; Broomall, William; Kolker, Natali; Kolker, Eugene

    2014-09-10

    Functional annotation of newly sequenced genomes is one of the major challenges in modern biology. With modern sequencing technologies, the protein sequence universe is rapidly expanding. Newly sequenced bacterial genomes alone contain over 7.5 million proteins. The rate of data generation has far surpassed that of protein annotation. The volume of protein data makes manual curation infeasible, whereas a high compute cost limits the utility of existing automated approaches. In this work, we present an improved and optmized automated workflow to enable large-scale protein annotation. The workflow uses high performance computing architectures and a low complexity classification algorithm to assign proteins into existing clusters of orthologous groups of proteins. On the basis of the Position-Specific Iterative Basic Local Alignment Search Tool the algorithm ensures at least 80% specificity and sensitivity of the resulting classifications. The workflow utilizes highly scalable parallel applications for classification and sequence alignment. Using Extreme Science and Engineering Discovery Environment supercomputers, the workflow processed 1,200,000 newly sequenced bacterial proteins. With the rapid expansion of the protein sequence universe, the proposed workflow will enable scientists to annotate big genome data.

  4. Optimizing high performance computing workflow for protein functional annotation

    PubMed Central

    Stanberry, Larissa; Rekepalli, Bhanu; Liu, Yuan; Giblock, Paul; Higdon, Roger; Montague, Elizabeth; Broomall, William; Kolker, Natali; Kolker, Eugene

    2014-01-01

    Functional annotation of newly sequenced genomes is one of the major challenges in modern biology. With modern sequencing technologies, the protein sequence universe is rapidly expanding. Newly sequenced bacterial genomes alone contain over 7.5 million proteins. The rate of data generation has far surpassed that of protein annotation. The volume of protein data makes manual curation infeasible, whereas a high compute cost limits the utility of existing automated approaches. In this work, we present an improved and optmized automated workflow to enable large-scale protein annotation. The workflow uses high performance computing architectures and a low complexity classification algorithm to assign proteins into existing clusters of orthologous groups of proteins. On the basis of the Position-Specific Iterative Basic Local Alignment Search Tool the algorithm ensures at least 80% specificity and sensitivity of the resulting classifications. The workflow utilizes highly scalable parallel applications for classification and sequence alignment. Using Extreme Science and Engineering Discovery Environment supercomputers, the workflow processed 1,200,000 newly sequenced bacterial proteins. With the rapid expansion of the protein sequence universe, the proposed workflow will enable scientists to annotate big genome data. PMID:25313296

  5. Human and server docking prediction for CAPRI round 30-35 using LZerD with combined scoring functions.

    PubMed

    Peterson, Lenna X; Kim, Hyungrae; Esquivel-Rodriguez, Juan; Roy, Amitava; Han, Xusi; Shin, Woong-Hee; Zhang, Jian; Terashi, Genki; Lee, Matt; Kihara, Daisuke

    2017-03-01

    We report the performance of protein-protein docking predictions by our group for recent rounds of the Critical Assessment of Prediction of Interactions (CAPRI), a community-wide assessment of state-of-the-art docking methods. Our prediction procedure uses a protein-protein docking program named LZerD developed in our group. LZerD represents a protein surface with 3D Zernike descriptors (3DZD), which are based on a mathematical series expansion of a 3D function. The appropriate soft representation of protein surface with 3DZD makes the method more tolerant to conformational change of proteins upon docking, which adds an advantage for unbound docking. Docking was guided by interface residue prediction performed with BindML and cons-PPISP as well as literature information when available. The generated docking models were ranked by a combination of scoring functions, including PRESCO, which evaluates the native-likeness of residues' spatial environments in structure models. First, we discuss the overall performance of our group in the CAPRI prediction rounds and investigate the reasons for unsuccessful cases. Then, we examine the performance of several knowledge-based scoring functions and their combinations for ranking docking models. It was found that the quality of a pool of docking models generated by LZerD, that is whether or not the pool includes near-native models, can be predicted by the correlation of multiple scores. Although the current analysis used docking models generated by LZerD, findings on scoring functions are expected to be universally applicable to other docking methods. Proteins 2017; 85:513-527. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  6. The University-Industry Relations of an Entrepreneurial University: The Case of the University of Twente.

    ERIC Educational Resources Information Center

    Schutte, Frits

    1999-01-01

    Describes the development of the University of Twente from a regional teaching university to a national research university, the "entrepreneurial university" of the Netherlands. Focuses on spinoffs from the university, an incubator in a business and science park and the generation of venture capital. Estimates the regional impact of such…

  7. Solidarity in the Grandparent-Adult Grandchild Relationship and Trajectories of Depressive Symptoms.

    PubMed

    Moorman, Sara M; Stokes, Jeffrey E

    2016-06-01

    Grandparent-adult grandchild relationships are becoming longer and more common, and therefore potentially more influential in the lives of individuals. This study examined the influence of solidarity (i.e., affinity, contact, and functional exchange) in the grandparent-adult grandchild relationship upon the depressive symptoms of both members of the dyad. The study used data from the Longitudinal Study of Generations, a survey of 3- and 4-generation U.S. families that included 7 waves of data collection between 1985 and 2004. The sample was comprised of 374 grandparents and 356 adult grandchildren. We analyzed the data using multilevel growth curve models. For both grandparents and adult grandchildren, greater affinity reduced depressive symptoms and more frequent contact increased symptoms. For grandparents only, receiving functional support without also providing it increased depressive symptoms. The average grandparent-adult grandchild relationship is a source of both support and strain to both generations. These relationships exhibit great diversity, however, with large amounts of variation between dyads and within a single dyad over time. We suggest how policy makers and practitioners can identify the relational contexts that best promote the well-being of members of both generations. © The Author 2014. Published by Oxford University Press on behalf of The Gerontological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  8. Employing online quantum random number generators for generating truly random quantum states in Mathematica

    NASA Astrophysics Data System (ADS)

    Miszczak, Jarosław Adam

    2013-01-01

    The presented package for the Mathematica computing system allows the harnessing of quantum random number generators (QRNG) for investigating the statistical properties of quantum states. The described package implements a number of functions for generating random states. The new version of the package adds the ability to use the on-line quantum random number generator service and implements new functions for retrieving lists of random numbers. Thanks to the introduced improvements, the new version provides faster access to high-quality sources of random numbers and can be used in simulations requiring large amount of random data. New version program summaryProgram title: TRQS Catalogue identifier: AEKA_v2_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEKA_v2_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 18 134 No. of bytes in distributed program, including test data, etc.: 2 520 49 Distribution format: tar.gz Programming language: Mathematica, C. Computer: Any supporting Mathematica in version 7 or higher. Operating system: Any platform supporting Mathematica; tested with GNU/Linux (32 and 64 bit). RAM: Case-dependent Supplementary material: Fig. 1 mentioned below can be downloaded. Classification: 4.15. External routines: Quantis software library (http://www.idquantique.com/support/quantis-trng.html) Catalogue identifier of previous version: AEKA_v1_0 Journal reference of previous version: Comput. Phys. Comm. 183(2012)118 Does the new version supersede the previous version?: Yes Nature of problem: Generation of random density matrices and utilization of high-quality random numbers for the purpose of computer simulation. Solution method: Use of a physical quantum random number generator and an on-line service providing access to the source of true random numbers generated by quantum real number generator. Reasons for new version: Added support for the high-speed on-line quantum random number generator and improved methods for retrieving lists of random numbers. Summary of revisions: The presented version provides two signicant improvements. The first one is the ability to use the on-line Quantum Random Number Generation service developed by PicoQuant GmbH and the Nano-Optics groups at the Department of Physics of Humboldt University. The on-line service supported in the version 2.0 of the TRQS package provides faster access to true randomness sources constructed using the laws of quantum physics. The service is freely available at https://qrng.physik.hu-berlin.de/. The use of this service allows using the presented package with the need of a physical quantum random number generator. The second improvement introduced in this version is the ability to retrieve arrays of random data directly for the used source. This increases the speed of the random number generation, especially in the case of an on-line service, where it reduces the time necessary to establish the connection. Thanks to the speed improvement of the presented version, the package can now be used in simulations requiring larger amounts of random data. Moreover, the functions for generating random numbers provided by the current version of the package more closely follow the pattern of functions for generating pseudo- random numbers provided in Mathematica. Additional comments: Speed comparison: The implementation of the support for the QRNG on-line service provides a noticeable improvement in the speed of random number generation. For the samples of real numbers of size 101; 102,…,107 the times required to generate these samples using Quantis USB device and QRNG service are compared in Fig. 1. The presented results show that the use of the on-line service provides faster access to random numbers. One should note, however, that the speed gain can increase or decrease depending on the connection speed between the computer and the server providing random numbers. Running time: Depends on the used source of randomness and the amount of random data used in the experiment. References: [1] M. Wahl, M. Leifgen, M. Berlin, T. Röhlicke, H.-J. Rahn, O. Benson., An ultrafast quantum random number generator with provably bounded output bias based on photon arrival time measurements, Applied Physics Letters, Vol. 098, 171105 (2011). http://dx.doi.org/10.1063/1.3578456.

  9. The moderating role of emotional competence in suicidal ideation among Chinese university students.

    PubMed

    Kwok, Sylvia Y C L

    2014-04-01

    To explore the relationship among perceived family functioning, emotional competence and suicidal ideation and to examine the moderating role of emotional competence in suicidal ideation. Previous studies have highlighted that poor family relationships and emotional symptoms are significant predictors of suicidal ideation. However, the roles of perceived family functioning and emotional competence in predicting suicidal ideation have not been given adequate attention. A cross-sectional survey using convenience sampling. A questionnaire was administered to 302 university students from February-April in 2011 in Hong Kong. The means, standard deviations and Cronbach's alphas of the variables were computed. Pearson correlation analyses and hierarchical regression analyses were performed. Hierarchical regression analyses showed that perceived high family functioning and emotional competence were significant negative predictors of suicidal ideation. Further analyses showed that parental concern, parental control and creative use of emotions were significant predictors of suicidal ideation. Emotional competence, specifically creative use of emotions, was found to moderate the relationship between perceived family functioning and suicidal ideation. The findings support the family ecological framework and provide evidence for emotional competence as a resilience factor that buffers low family functioning on suicidal ideation. Suggested measures to decrease suicidal ideation include enhancing parental concern, lessening parental control, developing students' awareness, regulation and management of their own emotions, fostering empathy towards others' emotional expression, enhancing social skills in sharing and influencing others' emotions and increasing the positive use of emotions for the evaluation and generation of new ideas. © 2013 John Wiley & Sons Ltd.

  10. Roles, intents, and actions: First-year teachers' uses of discourse during elementary science instruction

    NASA Astrophysics Data System (ADS)

    Newman, William J., Jr.

    In this study, I examined how three first-year elementary teachers constructed and used classroom discourse during science instruction. The three participants, though graduates from different universities, learned to teach science through similar science methods courses, which stressed the importance of inquiry-based science instruction. The participants taught different grade levels, and two of them taught at the same school. Data sources included field notes, videotapes, audiotapes, and semi-structured teacher interviews. While monologic and dialogic discourse existed in all three classrooms, monologic discourse was more prominent, especially when the discourse was teacher controlled. Dialogic discourse occurred most often during student-centered activities. The teachers constructed discourse with authoritative function to present science content and determine student comprehension. Generative function was most likely during student-based small group discussions. Monologic character often aligned with authoritative function, and dialogic character often aligned with generative function. However, monologic/generative and dialogic/authoritative discourse events did occur, contributing to the development of a discourse theory model. The teacher explanations for discourse included classroom control, inadequate planning, time constraints, life experiences, science education standards, and assessment. The teachers relied on their texts, kits, and state science standards to determine the content and methods for science instruction. They rarely reported that their science methods courses influenced how they taught science. The observed lessons rarely aligned with science education reform descriptions of appropriate science instruction. Implications include the need for in-service programs for beginning science teachers, curricular reform for science texts and kits, and explicit instruction of discourse strategies in science methods courses and in-service programs.

  11. The triple helix--NIH, industry, and the academic world.

    PubMed Central

    Lowe, C. U.

    1982-01-01

    Spectacular accomplishments in biomedical research have given birth to what is now perceived as a biological revolution, an epoch in which man has acquired the skill to manipulate the fundamental unit of heredity, the gene. This revolution carries with it the prospect of remarkable opportunities to improve the quality of life and to probe with increasing precision the mysteries of cellular organization and function. It comes, however, at a time when the opportunity to exploit this new knowledge may be limited by a significant reduction in federal support of basic research, and a situation which prompts universities and other centers of scientific activity to seek funding from industrial patrons. This trend has generated a new constellation of institutional challenges, for one apparent result of industrial sponsorship of university-based biomedical research is a threat to university governance as altered allegiances emerge and as the potential for financial gain appears almost limitless. This essay explores background issues leading to these new alliances, seeks to identify some of the central problems emerging for university administrators, faculty, and students, and then poses a key question: Can industrial support for university-based biomedical research fill the apparent short-fall in federal dollars in the foreseeable future? An analysis of available data indicates that this outcome is unlikely either now or in the years ahead. PMID:7180024

  12. Institutional Commitment to Community Engagement: A Case Study of Makerere University

    ERIC Educational Resources Information Center

    Mugabi, Henry

    2015-01-01

    Although the earliest medieval universities began as teaching-only institutions, the university as an institution has since experienced revolutions in the way its functions are conceived. Currently, the university embraces three functions: teaching, research and community engagement. Although the teaching and research functions of the university…

  13. The Functions of Function Discourse--University Mathematics Teaching from a Commognitive Standpoint

    ERIC Educational Resources Information Center

    Viirman, Olov

    2014-01-01

    This paper addresses a topic within university mathematics education which has been somewhat underexplored: the teaching practices actually used by university mathematics teachers when giving lectures. The study investigates the teaching practices of seven Swedish university teachers on the topic of functions using a discursive approach, the…

  14. Knowing One’s Place: Parental Educational Background Influences Social Identification with Academia, Test Anxiety, and Satisfaction with Studying at University

    PubMed Central

    Janke, Stefan; Rudert, Selma C.; Marksteiner, Tamara; Dickhäuser, Oliver

    2017-01-01

    First-generation students (i.e., students whose parents did not attend university) often experience difficulties fitting in with the social environment at universities. This experience of personal misfit is supposedly associated with an impaired social identification with their aspired in-group of academics compared to continuing-generation students (i.e., students with at least one parent with an academic degree. In this article, we investigate how the postulated differences in social identification with the group of academics affect first-generation students’ satisfaction with studying and test anxiety over time. We assume that first-generation students’ impaired social identification with the group of academics leads to decreased satisfaction with studying and aggravated test anxiety over the course of the first academic year. In a longitudinal study covering students’ first year at a German university, we found that continuing-generation students consistently identified more strongly with their new in-group of academics than first-generation students. The influence of social identification on test anxiety and satisfaction with studying differed between groups. For continuing-generation students, social identification with the group of academics buffered test anxiety and helped them maintain satisfaction with studying over time. We could not find these direct effects within the group of first-generation students. Instead, first-generation students were more sensitive to effects of test anxiety on satisfaction with studying and vice versa over time. The results suggest that first-generation students might be more sensitive to the anticipation of academic failure. Furthermore, continuing-generation students’ social identification with the group of academics might have buffered them against the impact of negative experiences during the entry phase at university. Taken together, our findings underscore that deficit-driven approaches focusing solely on first-generation status may not be sufficient to fully understand the importance of parental educational background for students’ well-being. More specifically, continuing-generation students might reap benefits from their parental educational background. These benefits widen the social gap in academia in addition to the disadvantages of students with first-generation status. In sum, understanding the benefits of continuing-generation status has important implications for interventions aiming to reduce social class gaps in academia. PMID:28824505

  15. Midcingulate Motor Map and Feedback Detection: Converging Data from Humans and Monkeys.

    PubMed

    Procyk, Emmanuel; Wilson, Charles R E; Stoll, Frederic M; Faraut, Maïlys C M; Petrides, Michael; Amiez, Céline

    2016-02-01

    The functional and anatomical organization of the cingulate cortex across primate species is the subject of considerable and often confusing debate. The functions attributed to the midcingulate cortex (MCC) embrace, among others, feedback processing, pain, salience, action-reward association, premotor functions, and conflict monitoring. This multiplicity of functional concepts suggests either unresolved separation of functional contributions or integration and convergence. We here provide evidence from recent experiments in humans and from a meta-analysis of monkey data that MCC feedback-related activity is generated in the rostral cingulate premotor area by specific body maps directly related to the modality of feedback. As such, we argue for an embodied mechanism for adaptation and exploration in MCC. We propose arguments and precise tools to resolve the origins of performance monitoring signals in the medial frontal cortex, and to progress on issues regarding homology between human and nonhuman primate cingulate cortex. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  16. Dithiocarbamate Self-Assembled Monolayers as Efficient Surface Modifiers for Low Work Function Noble Metals

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Meyer, Dominik; Schäfer, Tobias; Schulz, Philip

    2016-09-06

    Tuning the work function of the electrode is one of the crucial steps to improve charge extraction in organic electronic devices. Here, we show that N,N-dialkyl dithiocarbamates (DTC) can be effectively employed to produce low work function noble metal electrodes. Work functions between 3.1 and 3.5 eV are observed for all metals investigated (Cu, Ag, and Au). Ultraviolet photoemission spectroscopy (UPS) reveals a maximum decrease in work function by 2.1 eV as compared to the bare metal surface. Electronic structure calculations elucidate how the complex interplay between intrinsic dipoles and dipoles induced by bond formation generates such large work functionmore » shifts. Subsequently, we quantify the improvement in contact resistance of organic thin film transistor devices with DTC coated source and drain electrodes. These findings demonstrate that DTC molecules can be employed as universal surface modifiers to produce stable electrodes for electron injection in high performance hybrid organic optoelectronics.« less

  17. 40 CFR 262.101 - What is in this subpart?

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University Laboratories XL Project-Laboratory Environmental Management Standard § 262.101 What is in this subpart? This subpart provides a framework for a new management system for wastes that are generated in University laboratories. This...

  18. Physical-depth architectural requirements for generating universal photonic cluster states

    NASA Astrophysics Data System (ADS)

    Morley-Short, Sam; Bartolucci, Sara; Gimeno-Segovia, Mercedes; Shadbolt, Pete; Cable, Hugo; Rudolph, Terry

    2018-01-01

    Most leading proposals for linear-optical quantum computing (LOQC) use cluster states, which act as a universal resource for measurement-based (one-way) quantum computation. In ballistic approaches to LOQC, cluster states are generated passively from small entangled resource states using so-called fusion operations. Results from percolation theory have previously been used to argue that universal cluster states can be generated in the ballistic approach using schemes which exceed the critical threshold for percolation, but these results consider cluster states with unbounded size. Here we consider how successful percolation can be maintained using a physical architecture with fixed physical depth, assuming that the cluster state is continuously generated and measured, and therefore that only a finite portion of it is visible at any one point in time. We show that universal LOQC can be implemented using a constant-size device with modest physical depth, and that percolation can be exploited using simple pathfinding strategies without the need for high-complexity algorithms.

  19. Large-scale galaxy flow from a non-gravitational impulse

    NASA Technical Reports Server (NTRS)

    Hogan, Craig J.; Kaiser, Nick

    1989-01-01

    A theory is presented describing linear perturbations of an expanding universe containing multiple, independently perturbed, collisionless, gravitationally coupled constituents. Solutions are found in the limit where one initially unperturbed component dominates the total density. The theory is applied to perturbations generated by a nongravitational process in one or more of the light components, as would occur in explosive or radiation-pressure-instability theories of galaxy formation. The apparent dynamical density parameter and correlations between density and velocity amplitude for various populations, are evaluated as a function of cosmic scale factor.

  20. NREL`s variable speed test bed: Preliminary results

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carlin, P.W.; Fingersh, L.J.; Fuchs, E.F.

    1996-10-01

    Under an NREL subcontract, the Electrical and Computer Engineering Department of the University of Colorado (CU) designed a 20-kilowatt, 12-pole, permanent-magnet, electric generator and associated custom power electronics modules. This system can supply power over a generator speed range from 60 to 120 RPM. The generator was fabricated and assembled by the Denver electric-motor manufacturer, Unique Mobility, and the power electronics modules were designed and fabricated at the University. The generator was installed on a 56-foot tower in the modified nacelle of a Grumman Windstream 33 wind turbine in early October 1995. For checkout it was immediately loaded directly intomore » a three-phase resistive load in which it produced 3.5 kilowatts of power. Abstract only included. The ten-meter Grumman host wind machine is equipped with untwisted, untapered, NREL series S809 blades. The machine was instrumented to record both mechanical hub power and electrical power delivered to the utility. Initial tests are focusing on validating the calculated power surface. This mathematical surface shows the wind machine power as a function of both wind speed and turbine rotor speed. Upon the completion of this task, maximum effort will be directed toward filling a test matrix in which variable-speed operation will be contrasted with constant-speed mode by switching the variable speed control algorithm with the baseline constant speed control algorithm at 10 minutes time intervals. Other quantities in the test matrix will be analyzed to detect variable speed-effects on structural loads and power quality.« less

  1. Hydrogen Bonds and Life in the Universe.

    PubMed

    Vladilo, Giovanni; Hassanali, Ali

    2018-01-03

    The scientific community is allocating more and more resources to space missions and astronomical observations dedicated to the search for life beyond Earth. This experimental endeavor needs to be backed by a theoretical framework aimed at defining universal criteria for the existence of life. With this aim in mind, we have explored which chemical and physical properties should be expected for life possibly different from the terrestrial one, but similarly sustained by genetic and catalytic molecules. We show that functional molecules performing genetic and catalytic tasks must feature a hierarchy of chemical interactions operating in distinct energy bands. Of all known chemical bonds and forces, only hydrogen bonds are able to mediate the directional interactions of lower energy that are needed for the operation of genetic and catalytic tasks. For this reason and because of the unique quantum properties of hydrogen bonding, the functional molecules involved in life processes are predicted to have extensive hydrogen-bonding capabilities. A molecular medium generating a hydrogen-bond network is probably essential to support the activity of the functional molecules. These hydrogen-bond requirements constrain the viability of hypothetical biochemistries alternative to the terrestrial one, provide thermal limits to life molecular processes, and offer a conceptual framework to define a transition from a "covalent-bond stage" to a "hydrogen-bond stage" in prebiotic chemistry.

  2. Hydrogen Bonds and Life in the Universe

    PubMed Central

    2018-01-01

    The scientific community is allocating more and more resources to space missions and astronomical observations dedicated to the search for life beyond Earth. This experimental endeavor needs to be backed by a theoretical framework aimed at defining universal criteria for the existence of life. With this aim in mind, we have explored which chemical and physical properties should be expected for life possibly different from the terrestrial one, but similarly sustained by genetic and catalytic molecules. We show that functional molecules performing genetic and catalytic tasks must feature a hierarchy of chemical interactions operating in distinct energy bands. Of all known chemical bonds and forces, only hydrogen bonds are able to mediate the directional interactions of lower energy that are needed for the operation of genetic and catalytic tasks. For this reason and because of the unique quantum properties of hydrogen bonding, the functional molecules involved in life processes are predicted to have extensive hydrogen-bonding capabilities. A molecular medium generating a hydrogen-bond network is probably essential to support the activity of the functional molecules. These hydrogen-bond requirements constrain the viability of hypothetical biochemistries alternative to the terrestrial one, provide thermal limits to life molecular processes, and offer a conceptual framework to define a transition from a “covalent-bond stage” to a “hydrogen-bond stage” in prebiotic chemistry. PMID:29301382

  3. A universal TagModule collection for parallel genetic analysis of microorganisms

    PubMed Central

    Oh, Julia; Fung, Eula; Price, Morgan N.; Dehal, Paramvir S.; Davis, Ronald W.; Giaever, Guri; Nislow, Corey; Arkin, Adam P.; Deutschbauer, Adam

    2010-01-01

    Systems-level analyses of non-model microorganisms are limited by the existence of numerous uncharacterized genes and a corresponding over-reliance on automated computational annotations. One solution to this challenge is to disrupt gene function using DNA tag technology, which has been highly successful in parallelizing reverse genetics in Saccharomyces cerevisiae and has led to discoveries in gene function, genetic interactions and drug mechanism of action. To extend the yeast DNA tag methodology to a wide variety of microorganisms and applications, we have created a universal, sequence-verified TagModule collection. A hallmark of the 4280 TagModules is that they are cloned into a Gateway entry vector, thus facilitating rapid transfer to any compatible genetic system. Here, we describe the application of the TagModules to rapidly generate tagged mutants by transposon mutagenesis in the metal-reducing bacterium Shewanella oneidensis MR-1 and the pathogenic yeast Candida albicans. Our results demonstrate the optimal hybridization properties of the TagModule collection, the flexibility in applying the strategy to diverse microorganisms and the biological insights that can be gained from fitness profiling tagged mutant collections. The publicly available TagModule collection is a platform-independent resource for the functional genomics of a wide range of microbial systems in the post-genome era. PMID:20494978

  4. Three-dimensional images of choanoflagellate loricae

    PubMed Central

    Leadbeater, Barry S.C; Yu, QiBin; Kent, Joyce; Stekel, Dov J

    2008-01-01

    Choanoflagellates are unicellular filter-feeding protozoa distributed universally in aquatic habitats. Cells are ovoid in shape with a single anterior flagellum encircled by a funnel-shaped collar of microvilli. Movement of the flagellum creates water currents from which food particles are entrapped on the outer surface of the collar and ingested by pseudopodia. One group of marine choanoflagellates has evolved an elaborate basket-like exoskeleton, the lorica, comprising two layers of siliceous costae made up of costal strips. A computer graphic model has been developed for generating three-dimensional images of choanoflagellate loricae based on a universal set of ‘rules’ derived from electron microscopical observations. This model has proved seminal in understanding how complex costal patterns can be assembled in a single continuous movement. The lorica, which provides a rigid framework around the cell, is multifunctional. It resists the locomotory forces generated by flagellar movement, directs and enhances water flow over the collar and, for planktonic species, contributes towards maintaining cells in suspension. Since the functional morphology of choanoflagellate cells is so effective and has been highly conserved within the group, the ecological and evolutionary radiation of choanoflagellates is almost entirely dependent on the ability of the external coverings, particularly the lorica, to diversify. PMID:18755674

  5. Distribution of the largest aftershocks in branching models of triggered seismicity: theory of the universal Båth law.

    PubMed

    Saichev, A; Sornette, D

    2005-05-01

    Using the epidemic-type aftershock sequence (ETAS) branching model of triggered seismicity, we apply the formalism of generating probability functions to calculate exactly the average difference between the magnitude of a mainshock and the magnitude of its largest aftershock over all generations. This average magnitude difference is found empirically to be independent of the mainshock magnitude and equal to 1.2, a universal behavior known as Båth's law. Our theory shows that Båth's law holds only sufficiently close to the critical regime of the ETAS branching process. Allowing for error bars +/- 0.1 for Båth's constant value around 1.2, our exact analytical treatment of Båth's law provides new constraints on the productivity exponent alpha and the branching ratio n: 0.9 approximately < alpha < or =1. We propose a method for measuring alpha based on the predicted renormalization of the Gutenberg-Richter distribution of the magnitudes of the largest aftershock. We also introduce the "second Båth law for foreshocks:" the probability that a main earthquake turns out to be the foreshock does not depend on its magnitude rho.

  6. Simulation environment based on the Universal Verification Methodology

    NASA Astrophysics Data System (ADS)

    Fiergolski, A.

    2017-01-01

    Universal Verification Methodology (UVM) is a standardized approach of verifying integrated circuit designs, targeting a Coverage-Driven Verification (CDV). It combines automatic test generation, self-checking testbenches, and coverage metrics to indicate progress in the design verification. The flow of the CDV differs from the traditional directed-testing approach. With the CDV, a testbench developer, by setting the verification goals, starts with an structured plan. Those goals are targeted further by a developed testbench, which generates legal stimuli and sends them to a device under test (DUT). The progress is measured by coverage monitors added to the simulation environment. In this way, the non-exercised functionality can be identified. Moreover, the additional scoreboards indicate undesired DUT behaviour. Such verification environments were developed for three recent ASIC and FPGA projects which have successfully implemented the new work-flow: (1) the CLICpix2 65 nm CMOS hybrid pixel readout ASIC design; (2) the C3PD 180 nm HV-CMOS active sensor ASIC design; (3) the FPGA-based DAQ system of the CLICpix chip. This paper, based on the experience from the above projects, introduces briefly UVM and presents a set of tips and advices applicable at different stages of the verification process-cycle.

  7. Dynamical generation of noiseless quantum subsystems

    PubMed

    Viola; Knill; Lloyd

    2000-10-16

    We combine dynamical decoupling and universal control methods for open quantum systems with coding procedures. By exploiting a general algebraic approach, we show how appropriate encodings of quantum states result in obtaining universal control over dynamically generated noise-protected subsystems with limited control resources. In particular, we provide a constructive scheme based on two-body Hamiltonians for performing universal quantum computation over large noiseless spaces which can be engineered in the presence of arbitrary linear quantum noise.

  8. Ancestral Exposure to Stress Generates New Behavioral Traits and a Functional Hemispheric Dominance Shift.

    PubMed

    Ambeskovic, Mirela; Soltanpour, Nasrin; Falkenberg, Erin A; Zucchi, Fabiola C R; Kolb, Bryan; Metz, Gerlinde A S

    2017-03-01

    In a continuously stressful environment, the effects of recurrent prenatal stress (PS) accumulate across generations and generate new behavioral traits in the absence of genetic variation. Here, we investigated if PS or multigenerational PS across 4 generations differentially affect behavioral traits, laterality, and hemispheric dominance in male and female rats. Using skilled reaching and skilled walking tasks, 3 findings support the formation of new behavioral traits and shifted laterality by multigenerational stress. First, while PS in the F1 generation did not alter paw preference, multigenerational stress in the F4 generation shifted paw preference to favor left-handedness only in males. Second, multigenerational stress impaired skilled reaching and skilled walking movement abilities in males, while improving these abilities in females beyond the levels of controls. Third, the shift toward left-handedness in multigenerationally stressed males was accompanied by increased dendritic complexity and greater spine density in the right parietal cortex. Thus, cumulative multigenerational stress generates sexually dimorphic left-handedness and dominance shift toward the right hemisphere in males. These findings explain the origins of apparently heritable behavioral traits and handedness in the absence of DNA sequence variations while proposing epigenetic mechanisms. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  9. SIMAP—the database of all-against-all protein sequence similarities and annotations with new interfaces and increased coverage

    PubMed Central

    Arnold, Roland; Goldenberg, Florian; Mewes, Hans-Werner; Rattei, Thomas

    2014-01-01

    The Similarity Matrix of Proteins (SIMAP, http://mips.gsf.de/simap/) database has been designed to massively accelerate computationally expensive protein sequence analysis tasks in bioinformatics. It provides pre-calculated sequence similarities interconnecting the entire known protein sequence universe, complemented by pre-calculated protein features and domains, similarity clusters and functional annotations. SIMAP covers all major public protein databases as well as many consistently re-annotated metagenomes from different repositories. As of September 2013, SIMAP contains >163 million proteins corresponding to ∼70 million non-redundant sequences. SIMAP uses the sensitive FASTA search heuristics, the Smith–Waterman alignment algorithm, the InterPro database of protein domain models and the BLAST2GO functional annotation algorithm. SIMAP assists biologists by facilitating the interactive exploration of the protein sequence universe. Web-Service and DAS interfaces allow connecting SIMAP with any other bioinformatic tool and resource. All-against-all protein sequence similarity matrices of project-specific protein collections are generated on request. Recent improvements allow SIMAP to cover the rapidly growing sequenced protein sequence universe. New Web-Service interfaces enhance the connectivity of SIMAP. Novel tools for interactive extraction of protein similarity networks have been added. Open access to SIMAP is provided through the web portal; the portal also contains instructions and links for software access and flat file downloads. PMID:24165881

  10. Performance of finite order distribution-generated universal portfolios

    NASA Astrophysics Data System (ADS)

    Pang, Sook Theng; Liew, How Hui; Chang, Yun Fah

    2017-04-01

    A Constant Rebalanced Portfolio (CRP) is an investment strategy which reinvests by redistributing wealth equally among a set of stocks. The empirical performance of the distribution-generated universal portfolio strategies are analysed experimentally concerning 10 higher volume stocks from different categories in Kuala Lumpur Stock Exchange. The time interval of study is from January 2000 to December 2015, which includes the credit crisis from September 2008 to March 2009. The performance of the finite-order universal portfolio strategies has been shown to be better than Constant Rebalanced Portfolio with some selected parameters of proposed universal portfolios.

  11. The Expression of Depressive Symptomatology in Korean American Undergraduates: Sex and Generational Differences

    ERIC Educational Resources Information Center

    Castellanos, Jeanett; Gloria, Alberta M.; Kim, Sara Cho; Park, Yong S.

    2014-01-01

    This study examined the influence of acculturation and perception of the university environment on the depressive symptomatology of 228 Korean American undergraduates, with a focus on sex and generational differences. Perceptions of the university environment and perceived barriers were positive predictors of depressive symptomatology in…

  12. Opportunities in Honors for Underserved Students

    ERIC Educational Resources Information Center

    Pattillo, Baker

    2015-01-01

    First-generation students sometimes lack a support network that values higher education. Stephen F. Austin State University (SFA)--a regional, comprehensive university of approximately 13,000 students, located in East Texas--serves a diverse body of students who are nearly 50% first-generation. These students often face financial constraints and…

  13. Automatic Digital Content Generation System for Real-Time Distance Lectures

    ERIC Educational Resources Information Center

    Iwatsuki, Masami; Takeuchi, Norio; Kobayashi, Hisato; Yana, Kazuo; Takeda, Hiroshi; Yaginuma, Hisashi; Kiyohara, Hajime; Tokuyasu, Akira

    2007-01-01

    This article describes a new automatic digital content generation system we have developed. Recently some universities, including Hosei University, have been offering students opportunities to take distance interactive classes over the Internet from overseas. When such distance lectures are delivered in English to Japanese students, there is a…

  14. Ultraviolet surprise: Efficient soft x-ray high-harmonic generation in multiply ionized plasmas.

    PubMed

    Popmintchev, Dimitar; Hernández-García, Carlos; Dollar, Franklin; Mancuso, Christopher; Pérez-Hernández, Jose A; Chen, Ming-Chang; Hankla, Amelia; Gao, Xiaohui; Shim, Bonggu; Gaeta, Alexander L; Tarazkar, Maryam; Romanov, Dmitri A; Levis, Robert J; Gaffney, Jim A; Foord, Mark; Libby, Stephen B; Jaron-Becker, Agnieszka; Becker, Andreas; Plaja, Luis; Murnane, Margaret M; Kapteyn, Henry C; Popmintchev, Tenio

    2015-12-04

    High-harmonic generation is a universal response of matter to strong femtosecond laser fields, coherently upconverting light to much shorter wavelengths. Optimizing the conversion of laser light into soft x-rays typically demands a trade-off between two competing factors. Because of reduced quantum diffusion of the radiating electron wave function, the emission from each species is highest when a short-wavelength ultraviolet driving laser is used. However, phase matching--the constructive addition of x-ray waves from a large number of atoms--favors longer-wavelength mid-infrared lasers. We identified a regime of high-harmonic generation driven by 40-cycle ultraviolet lasers in waveguides that can generate bright beams in the soft x-ray region of the spectrum, up to photon energies of 280 electron volts. Surprisingly, the high ultraviolet refractive indices of both neutral atoms and ions enabled effective phase matching, even in a multiply ionized plasma. We observed harmonics with very narrow linewidths, while calculations show that the x-rays emerge as nearly time-bandwidth-limited pulse trains of ~100 attoseconds. Copyright © 2015, American Association for the Advancement of Science.

  15. The Ultraviolet Surprise. Efficient Soft X-Ray High Harmonic Generation in Multiply-Ionized Plasmas

    DOE PAGES

    Popmintchev, Dimitar; Hernandez-Garcia, Carlos; Dollar, Franklin; ...

    2015-12-04

    High-harmonic generation is a universal response of matter to strong femtosecond laser fields, coherently upconverting light to much shorter wavelengths. Optimizing the conversion of laser light into soft x-rays typically demands a trade-off between two competing factors. Reduced quantum diffusion of the radiating electron wave function results in emission from each species which is highest when a short-wavelength ultraviolet driving laser is used. But, phase matching—the constructive addition of x-ray waves from a large number of atoms—favors longer-wavelength mid-infrared lasers. We identified a regime of high-harmonic generation driven by 40-cycle ultraviolet lasers in waveguides that can generate bright beams inmore » the soft x-ray region of the spectrum, up to photon energies of 280 electron volts. Surprisingly, the high ultraviolet refractive indices of both neutral atoms and ions enabled effective phase matching, even in a multiply ionized plasma. We observed harmonics with very narrow linewidths, while calculations show that the x-rays emerge as nearly time-bandwidth–limited pulse trains of ~100 attoseconds.« less

  16. Innovations in Nigerian Universities: Perspectives of an Insider from a "Fourth Generation" University

    ERIC Educational Resources Information Center

    Etuk, Grace Koko

    2015-01-01

    This paper elaborates on innovations which have been effected in universities in Nigeria, using a somewhat young university as a paradigm. The innovations discussed include private ownership of universities, innovative funding strategies and innovative quality assurance practices. These include innovative planning (strategic planning); innovative…

  17. Yale University Press: Disseminating "Lux et Veritas"?

    ERIC Educational Resources Information Center

    Parrott, John B.

    2010-01-01

    America's university presses are situated within a network of over one hundred universities, learned societies, and scholarly associations. According to a pamphlet put out by the American Association of University Presses, these presses "make available to the broader public the full range and value of research generated by university faculty."…

  18. Progress in bio-manufacture of platelets for transfusion.

    PubMed

    Heazlewood, Shen Y; Nilsson, Susan K; Cartledge, Kellie; Be, Cheang Ly; Vinson, Andrew; Gel, Murat; Haylock, David N

    2017-11-01

    Blood transfusion services face an ever-increasing demand for donor platelets to meet clinical needs. Whilst strategies for increasing platelet storage life and improving the efficiency of donor platelet collection are important, in the longer term, platelets generated by bio-manufacturing processes will be required to meet demands. Production of sufficient numbers of in vitro-derived platelets for transfusion represents a significant bioengineering challenge. In this review, we highlight recent progress in this area of research and outline the main technical and biological obstacles that need to be met before this becomes feasible and economic. A critical consideration is assurance of the functional properties of these cells as compared to their fresh, donor collected, counterparts. We contend that platelet-like particles and in vitro-derived platelets that phenotypically resemble fresh platelets must deliver the same functions as these cells upon transfusion. We also note recent progress with immortalized megakaryocyte progenitor cell lines, molecular strategies for reducing expression of HLA Class I to generate universal donor platelets and the move to early clinical studies with in vitro-derived platelets.

  19. A Few Integrable Dynamical Systems, Recurrence Operators, Expanding Integrable Models and Hamiltonian Structures by the r-Matrix Method

    NASA Astrophysics Data System (ADS)

    Zhang, Yu-Feng; Muhammad, Iqbal; Yue, Chao

    2017-10-01

    We extend two known dynamical systems obtained by Blaszak, et al. via choosing Casimir functions and utilizing Novikov-Lax equation so that a series of novel dynamical systems including generalized Burgers dynamical system, heat equation, and so on, are followed to be generated. Then we expand some differential operators presented in the paper to deduce two types of expanding dynamical models. By taking the generalized Burgers dynamical system as an example, we deform its expanding model to get a half-expanding system, whose recurrence operator is derived from Lax representation, and its Hamiltonian structure is also obtained by adopting a new way. Finally, we expand the generalized Burgers dynamical system to the (2+1)-dimensional case whose Hamiltonian structure is derived by Poisson tensor and gradient of the Casimir function. Besides, a kind of (2+1)-dimensional expanding dynamical model of the (2+1)-dimensional dynamical system is generated as well. Supported by the Fundamental Research Funds for the Central University under Grant No. 2017XKZD11

  20. Precise integration of inducible transcriptional elements (PrIITE) enables absolute control of gene expression.

    PubMed

    Pinto, Rita; Hansen, Lars; Hintze, John; Almeida, Raquel; Larsen, Sylvester; Coskun, Mehmet; Davidsen, Johanne; Mitchelmore, Cathy; David, Leonor; Troelsen, Jesper Thorvald; Bennett, Eric Paul

    2017-07-27

    Tetracycline-based inducible systems provide powerful methods for functional studies where gene expression can be controlled. However, the lack of tight control of the inducible system, leading to leakiness and adverse effects caused by undesirable tetracycline dosage requirements, has proven to be a limitation. Here, we report that the combined use of genome editing tools and last generation Tet-On systems can resolve these issues. Our principle is based on precise integration of inducible transcriptional elements (coined PrIITE) targeted to: (i) exons of an endogenous gene of interest (GOI) and (ii) a safe harbor locus. Using PrIITE cells harboring a GFP reporter or CDX2 transcription factor, we demonstrate discrete inducibility of gene expression with complete abrogation of leakiness. CDX2 PrIITE cells generated by this approach uncovered novel CDX2 downstream effector genes. Our results provide a strategy for characterization of dose-dependent effector functions of essential genes that require absence of endogenous gene expression. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

  1. XMAP215 is a microtubule nucleation factor that functions synergistically with the γ-tubulin ring complex.

    PubMed

    Thawani, Akanksha; Kadzik, Rachel S; Petry, Sabine

    2018-05-01

    How microtubules (MTs) are generated in the cell is a major question in understanding how the cytoskeleton is assembled. For several decades, γ-tubulin has been accepted as the universal MT nucleator of the cell. Although there is evidence that γ-tubulin complexes are not the sole MT nucleators, identification of other nucleation factors has proven difficult. Here, we report that the well-characterized MT polymerase XMAP215 (chTOG/Msps/Stu2p/Alp14/Dis1 homologue) is essential for MT nucleation in Xenopus egg extracts. The concentration of XMAP215 determines the extent of MT nucleation. Even though XMAP215 and the γ-tubulin ring complex (γ-TuRC) possess minimal nucleation activity individually, together, these factors synergistically stimulate MT nucleation in vitro. The amino-terminal TOG domains 1-5 of XMAP215 bind to αβ-tubulin and promote MT polymerization, whereas the conserved carboxy terminus is required for efficient MT nucleation and directly binds to γ-tubulin. In summary, XMAP215 and γ-TuRC together function as the principal nucleation module that generates MTs in cells.

  2. Universal thermoelectric unit

    NASA Astrophysics Data System (ADS)

    Fedorov, M. I.; Engalychev, A. E.; Zaitsev, V. K.; Kaliazin, A. E.; Solomkin, F. Yu.

    1994-08-01

    The problems of energy supply of low power electric devices very often can be solved with thermoelectric generator even with low coefficient of performance, when other electric energy sources are not convenient. The problems of thermoelectric and construction choice for such generators are discussed in the paper. A series of domestic thermoelectric generators was designed by the authors. The work is based on designing an universal thermoelectric unit—a battery which consist of ten thermoelements. The coefficient of performance of the unit is about 4%. Any thermoelectric generator can be made as a combination of these units. Principal opportunity of production such thermoelectric generators on industrial scale was proved.

  3. Generation of hepatocyte-like cells from human induced pluripotent stem (iPS) cells by co-culturing embryoid body cells with liver non-parenchymal cell line TWNT-1.

    PubMed

    Javed, M Shahid; Yaqoob, Naeem; Iwamuro, Masaya; Kobayashi, Naoya; Fujiwara, Toshiyoshi

    2014-02-01

    To generate a homogeneous population of patient-specific hepatocyte-like cells (HLCs) from human iPS cells those show the morphologic and phenotypic properties of primary human hepatocytes. An experimental study. Department of Surgery, Okayama University, Graduate School of Medicine, Japan, from April to December 2011. Human iPS cells were generated and maintained on ES qualified matrigel coated plates supplemented with mTeSR medium or alternatively on mitotically inactivated MEF feeder layer in DMEM/F12 medium containing 20% KOSR, 4ng/ml bFGF-2, 1 x 10-4 M 2-mercaptoethanol, 1 mmol/L NEAA, 2mM L-glutamine and 1% penicillin-streptomycin. iPS cells were differentiated to HLCs by sequential culture using a four step differentiation protocol: (I) Generation of embryoid bodies (EBs) in suspension culture; (II) Induction of definitive endoderm (DE) from 2 days old EBs by growth in human activin-A (100 ng/ml) and basic fibroblasts growth factor (bFGF2) (100 ng/ml) on matrigel coated plates; (III) Induction of hepatic progenitors by co-culture with non-parenchymal human hepatic stellate cell line (TWNT-1); and (IV) Maturation by culture in dexamethasone. Characterization was performed by RT-PCR and functional assays. The generated HLCs showed microscopically morphological phenotype of human hepatocytes, expressed liver-specific genes (ASGPR, Albumin, AFP, Sox17, Fox A2), secreted human liver-specific proteins such as albumin, synthesized urea and metabolized ammonia. Functional HLCs were generated from human iPS cells, which could be used for autologus hepatocyte transplantation for liver failure and as in vitro model for determining the metabolic and toxicological properties of drug compounds.

  4. Standardization of renal function evaluation in Wistar rats (Rattus norvegicus) from the Federal University of Juiz de Fora's colony.

    PubMed

    de Castro, Bárbara Bruna Abreu; Colugnati, Fernando Antonio Basile; Cenedeze, Marcos Antonio; Suassuna, Paulo Giovanni de Albuquerque; Pinheiro, Hélady Sanders

    2014-01-01

    There is great interest in the use of animal models in the study of renal pathophysiology requires standardization of parameters. Standardize assessment of renal function in rats from in the Center for Reproductive Biology of Federal University of Juiz de Fora's colony. Thirty Wistar rats were used and performed measurements of creatinine (serum and urine), serum urea and proteinuria. Were evaluated: the urine collection interval in metabolic cages (24 hours or 12 hours), the need for 12-hour fast, the need of urine and serum deproteinization for creatinine measurement, need of serum deproteinization in animals with acute kidney injury to a spectrophotometer and ELISA, and the comparison of 24-hour proteinuria (PT 24 hours) with the protein/creatinine ratio (rP/C). Means were compared by the Student's t test, Pearson correlation, Bland-Altman plot for agreement and linear regression model to estimate PT 24 hours from rP/C. The 24 hours urine output was greater than 12 hours, interfering with the creatinine clearance calculation. In the fasting group showed less water intake and lower urinary creatinine. There was great variability for the deproteinized whey and readings performed in the two devices were similar. There was a strong correlation between PT 24 hours and rP/C and the equation was generated: PT 24 hours = (8.6113 x rP/C) + 1.0869. Was standardized: 24-hour urine collection without fasting. The deproteinization showed no benefit. The measurements were performed with spectrophotometer reliability. It generated a practical formula for estimating PT 24 hours through rP/C.

  5. Heterogeneously Assembled Metamaterials and Metadevices via 3D Modular Transfer Printing

    NASA Astrophysics Data System (ADS)

    Lee, Seungwoo; Kang, Byungsoo; Keum, Hohyun; Ahmed, Numair; Rogers, John A.; Ferreira, Placid M.; Kim, Seok; Min, Bumki

    2016-06-01

    Metamaterials have made the exotic control of the flow of electromagnetic waves possible, which is difficult to achieve with natural materials. In recent years, the emergence of functional metadevices has shown immense potential for the practical realization of highly efficient photonic devices. However, complex and heterogeneous architectures that enable diverse functionalities of metamaterials and metadevices have been challenging to realize because of the limited manufacturing capabilities of conventional fabrication methods. Here, we show that three-dimensional (3D) modular transfer printing can be used to construct diverse metamaterials in complex 3D architectures on universal substrates, which is attractive for achieving on-demand photonic properties. Few repetitive processing steps and rapid constructions are additional advantages of 3D modular transfer printing. Thus, this method provides a fascinating route to generate flexible and stretchable 2D/3D metamaterials and metadevices with heterogeneous material components, complex device architectures, and diverse functionalities.

  6. Heterogeneously Assembled Metamaterials and Metadevices via 3D Modular Transfer Printing.

    PubMed

    Lee, Seungwoo; Kang, Byungsoo; Keum, Hohyun; Ahmed, Numair; Rogers, John A; Ferreira, Placid M; Kim, Seok; Min, Bumki

    2016-06-10

    Metamaterials have made the exotic control of the flow of electromagnetic waves possible, which is difficult to achieve with natural materials. In recent years, the emergence of functional metadevices has shown immense potential for the practical realization of highly efficient photonic devices. However, complex and heterogeneous architectures that enable diverse functionalities of metamaterials and metadevices have been challenging to realize because of the limited manufacturing capabilities of conventional fabrication methods. Here, we show that three-dimensional (3D) modular transfer printing can be used to construct diverse metamaterials in complex 3D architectures on universal substrates, which is attractive for achieving on-demand photonic properties. Few repetitive processing steps and rapid constructions are additional advantages of 3D modular transfer printing. Thus, this method provides a fascinating route to generate flexible and stretchable 2D/3D metamaterials and metadevices with heterogeneous material components, complex device architectures, and diverse functionalities.

  7. Inverse bootstrapping conformal field theories

    NASA Astrophysics Data System (ADS)

    Li, Wenliang

    2018-01-01

    We propose a novel approach to study conformal field theories (CFTs) in general dimensions. In the conformal bootstrap program, one usually searches for consistent CFT data that satisfy crossing symmetry. In the new method, we reverse the logic and interpret manifestly crossing-symmetric functions as generating functions of conformal data. Physical CFTs can be obtained by scanning the space of crossing-symmetric functions. By truncating the fusion rules, we are able to concentrate on the low-lying operators and derive some approximate relations for their conformal data. It turns out that the free scalar theory, the 2d minimal model CFTs, the ϕ 4 Wilson-Fisher CFT, the Lee-Yang CFTs and the Ising CFTs are consistent with the universal relations from the minimal fusion rule ϕ 1 × ϕ 1 = I + ϕ 2 + T , where ϕ 1 , ϕ 2 are scalar operators, I is the identity operator and T is the stress tensor.

  8. Heterogeneously Assembled Metamaterials and Metadevices via 3D Modular Transfer Printing

    PubMed Central

    Lee, Seungwoo; Kang, Byungsoo; Keum, Hohyun; Ahmed, Numair; Rogers, John A.; Ferreira, Placid M.; Kim, Seok; Min, Bumki

    2016-01-01

    Metamaterials have made the exotic control of the flow of electromagnetic waves possible, which is difficult to achieve with natural materials. In recent years, the emergence of functional metadevices has shown immense potential for the practical realization of highly efficient photonic devices. However, complex and heterogeneous architectures that enable diverse functionalities of metamaterials and metadevices have been challenging to realize because of the limited manufacturing capabilities of conventional fabrication methods. Here, we show that three-dimensional (3D) modular transfer printing can be used to construct diverse metamaterials in complex 3D architectures on universal substrates, which is attractive for achieving on-demand photonic properties. Few repetitive processing steps and rapid constructions are additional advantages of 3D modular transfer printing. Thus, this method provides a fascinating route to generate flexible and stretchable 2D/3D metamaterials and metadevices with heterogeneous material components, complex device architectures, and diverse functionalities. PMID:27283594

  9. Advances in plant gene-targeted and functional markers: a review

    PubMed Central

    2013-01-01

    Public genomic databases have provided new directions for molecular marker development and initiated a shift in the types of PCR-based techniques commonly used in plant science. Alongside commonly used arbitrarily amplified DNA markers, other methods have been developed. Targeted fingerprinting marker techniques are based on the well-established practices of arbitrarily amplified DNA methods, but employ novel methodological innovations such as the incorporation of gene or promoter elements in the primers. These markers provide good reproducibility and increased resolution by the concurrent incidence of dominant and co-dominant bands. Despite their promising features, these semi-random markers suffer from possible problems of collision and non-homology analogous to those found with randomly generated fingerprints. Transposable elements, present in abundance in plant genomes, may also be used to generate fingerprints. These markers provide increased genomic coverage by utilizing specific targeted sites and produce bands that mostly seem to be homologous. The biggest drawback with most of these techniques is that prior genomic information about retrotransposons is needed for primer design, prohibiting universal applications. Another class of recently developed methods exploits length polymorphism present in arrays of multi-copy gene families such as cytochrome P450 and β-tubulin genes to provide cross-species amplification and transferability. A specific class of marker makes use of common features of plant resistance genes to generate bands linked to a given phenotype, or to reveal genetic diversity. Conserved DNA-based strategies have limited genome coverage and may fail to reveal genetic diversity, while resistance genes may be under specific evolutionary selection. Markers may also be generated from functional and/or transcribed regions of the genome using different gene-targeting approaches coupled with the use of RNA information. Such techniques have the potential to generate phenotypically linked functional markers, especially when fingerprints are generated from the transcribed or expressed region of the genome. It is to be expected that these recently developed techniques will generate larger datasets, but their shortcomings should also be acknowledged and carefully investigated. PMID:23406322

  10. Quantum supersymmetric Bianchi IX cosmology

    NASA Astrophysics Data System (ADS)

    Damour, Thibault; Spindel, Philippe

    2014-11-01

    We study the quantum dynamics of a supersymmetric squashed three-sphere by dimensionally reducing (to one timelike dimension) the action of D =4 simple supergravity for a S U (2 ) -homogeneous (Bianchi IX) cosmological model. The quantization of the homogeneous gravitino field leads to a 64-dimensional fermionic Hilbert space. After imposition of the diffeomorphism constraints, the wave function of the Universe becomes a 64-component spinor of spin(8,4) depending on the three squashing parameters, which satisfies Dirac-like, and Klein-Gordon-like, wave equations describing the propagation of a "quantum spinning particle" reflecting off spin-dependent potential walls. The algebra of the supersymmetry constraints and of the Hamiltonian one is found to close. One finds that the quantum Hamiltonian is built from operators that generate a 64-dimensional representation of the (infinite-dimensional) maximally compact subalgebra of the rank-3 hyperbolic Kac-Moody algebra A E3 . The (quartic-in-fermions) squared-mass term μ^ 2 entering the Klein-Gordon-like equation has several remarkable properties: (i) it commutes with all the other (Kac-Moody-related) building blocks of the Hamiltonian; (ii) it is a quadratic function of the fermion number NF; and (iii) it is negative in most of the Hilbert space. The latter property leads to a possible quantum avoidance of the singularity ("cosmological bounce"), and suggests imposing the boundary condition that the wave function of the Universe vanish when the volume of space tends to zero (a type of boundary condition which looks like a final-state condition when considering the big crunch inside a black hole). The space of solutions is a mixture of "discrete-spectrum states" (parametrized by a few constant parameters, and known in explicit form) and of continuous-spectrum states (parametrized by arbitrary functions entering some initial-value problem). The predominantly negative values of the squared-mass term lead to a "bottle effect" between small-volume universes and large-volume ones, and to a possible reduction of the continuous spectrum to a discrete spectrum of quantum states looking like excited versions of the Planckian-size universes described by the discrete states at fermionic levels NF=0 and 1.

  11. Universal collisional activation ion trap mass spectrometry

    DOEpatents

    McLuckey, S.A.; Goeringer, D.E.; Glish, G.L.

    1993-04-27

    A universal collisional activation ion trap comprises an ion trapping means containing a bath gas and having connected thereto a noise signal generator. A method of operating a universal collisional activation ion trap comprises the steps of: providing an ion trapping means; introducing into the ion trapping means a bath gas; and, generating a noise signal within the ion trapping means; introducing into the ion trapping means a substance that, when acted upon by the noise signal, undergoes collisional activation to form product ions.

  12. Universal collisional activation ion trap mass spectrometry

    DOEpatents

    McLuckey, Scott A.; Goeringer, Douglas E.; Glish, Gary L.

    1993-01-01

    A universal collisional activation ion trap comprises an ion trapping means containing a bath gas and having connected thereto a noise signal generator. A method of operating a universal collisional activation ion trap comprises the steps of: providing an ion trapping means; introducing into the ion trapping means a bath gas; and, generating a noise signal within the ion trapping means; introducing into the ion trapping means a substance that, when acted upon by the noise signal, undergoes collisional activation to form product ions.

  13. Psychosocial Predictors of Persistence among First-Generation Students at a Historically Black University

    ERIC Educational Resources Information Center

    Tyson-Ferrol, Cathleen A.

    2009-01-01

    The purpose of this study was to investigate the psychosocial factors that affect the persistence of the 2002 cohort of first-generation college students at a Historically Black University. Specifically, this investigation was concerned with the relationship between persistence and selected demographic, academic, financial aid, and family…

  14. Class and University Education: Inter-Generational Patterns in Canada. NALL Working Paper.

    ERIC Educational Resources Information Center

    Livingstone, D. W.; Stowe, Susan

    Young people from lower class origins continue to face major barriers to university education in Canada. This paper documents both substantial inter-generational class mobility and continuing inequalities in formal educational attainments by class origins. While Canada now has the world's higher educational attainments in its youth cohort and has…

  15. If Higher Education Listened to Me

    ERIC Educational Resources Information Center

    Aviles, Kitzzy; Phillips, Bill; Rosenblatt, Tim; Vargas, Jessica

    2005-01-01

    Technology has had a profound impact not only on colleges and universities but also on college and university students. Today's students have technological proficiencies not even imagined twenty-five or more years ago. Yet today's students are a varied group, composed of several generations. The Baby Boomers (born 1946-64), the Generation X-ers…

  16. Latino Student's Perceptions of the University Campus Climate: Exploratory Study of First Generation Students

    ERIC Educational Resources Information Center

    Hernandez, Yvonne

    2013-01-01

    This study examines Latino student's impressions of the university campus climate. The over-arching question guiding this study asked: How do Latino first college generation students negotiate the psychosocial, cultural and environmental perspectives of the college experience? The conceptual framework integrates three major higher education…

  17. Gender Inequalities among Staff in British and German Universities: A Qualitative Study

    ERIC Educational Resources Information Center

    Pritchard, Rosalind

    2010-01-01

    The purpose of the present research was to study gender inequality in British and German universities. Semi-structured interviews were undertaken with female academics in each country (UK, N = 40; Germany, N = 47). A generational difference of attitude was perceived in academe, with the younger generation clearly more strategic in career…

  18. The Effects of Generational Status and University Environment on Latina/o Undergraduates' Persistence Decisions

    ERIC Educational Resources Information Center

    Aguinaga, Arellys; Gloria, Alberta M.

    2015-01-01

    This study examined the importance of identity and cultural fit within the university on Latina/o undergraduates' academic persistence decisions. The psychosociocultural model (Gloria & Rodriguez, 2000) provided a framework for the study in which 128 Latino/a students' generational level in the United States, cultural congruity, perceptions of…

  19. First- and Second-Generation Design and Engineering Students: Experience, Attainment and Factors Influencing Them to Attend University

    ERIC Educational Resources Information Center

    Hunt, Clive; Collins, Bethan; Wardrop, Alex; Hutchings, Maggie; Heaslip, Vanessa; Pritchard, Colin

    2018-01-01

    Challenges for students who are "first-in-family" to attend university have been discussed within widening participation discourse. However, in the UK, "first-in-family" or first-generation students have frequently been conflated with those experiencing poverty or from lower socio-economic groups. This research integrated…

  20. Social Moderation and Dynamic Elements in Crowdsourced Geospatial Data: A Report on Quality Assessment, Dynamic Extensions and Mobile Device Engagement in the George Mason University Geocrowdsourcing Testbed

    DTIC Science & Technology

    2015-11-01

    GMU) Associate Professor Dieter Pfoser describes an explosion of user generated content (UGC) available over the Internet (Pfoser 2011, Crooks et al...Crowdsourced and User - Generated Geospatial Data,” Annual (Fairfax, VA: George Mason University, November 29, 2012), http://www.dtic.mil/dtic/tr/fulltext/u2...area include GPS-enabled geosocial and 34 Dieter Pfoser, “On User - Generated

  1. The type k universal portfolio generated by the f-divergence

    NASA Astrophysics Data System (ADS)

    Tan, Choon Peng; Seng, Kuang Kee

    2017-11-01

    The logarithm of the estimated next-day wealth return is approximated by k terms of its Taylor series. The resulting Type k universal portfolio generated by the f -divergence is obtained. An implicit form of the portfolio is also obtained by exploiting the mean-value theorem. An empirical study of the performance of the portfolio is focused on the Type 2 Helmbold universal portfolio. A few generalizations of the Helmbold universal portfolio have recently been studied, namely the reverse Helmbold and the parametric Helmbold portfolios. This new type of portfolio can be regarded a contribution to the inventory of Helmbold related universal portfolios. It is verified experimentally that an investor's wealth can be significantly increased by using the Type 2 Helmbold portfolio in investment.

  2. Genome medicine: gene therapy for the millennium, 30 September-3 October 2001, Rome, Italy.

    PubMed

    Gruenert, D C; Novelli, G; Dallapiccola, B; Colosimo, A

    2002-06-01

    The recent surge of DNA sequence information resulting from the efforts of agencies interested in deciphering the human genetic code has facilitated technological developments that have been critical in the identification of genes associated with numerous disease pathologies. In addition, these efforts have opened the door to the opportunity to develop novel genetic therapies to treat a broad range of inherited disorders. Through a joint effort by the University of Vermont, the University of Rome, Tor Vergata, University of Rome, La Sapienza, and the CSS Mendel Institute, Rome, an international meeting, 'Genome Medicine: Gene Therapy for the Millennium' was organized. This meeting provided a forum for the discussion of scientific and clinical advances stimulated by the explosion of sequence information generated by the Human Genome Project and the implications these advances have for gene therapy. The meeting had six sessions that focused on the functional evaluation of specific genes via biochemical analysis and through animal models, the development of novel therapeutic strategies involving gene targeting, artificial chromsomes, DNA delivery systems and non-embryonic stem cells, and on the ethical and social implications of these advances.

  3. The Transient High Energy Sky and Early Universe Surveyor (THESEUS)

    NASA Astrophysics Data System (ADS)

    Amati, Lorenzo; O'Brien, Paul T.; Götz, Diego

    2016-07-01

    The Transient High Energy Sky and Early Universe Surveyor (THESEUS) is a mission concept under development by a large international collaboration aimed at exploiting gamma-ray bursts for investigating the early Universe. The main scientific objectives of THESEUS include: investigating the star formation rate and metallicity evolution of the ISM and IGM up to redshift 9-10, detecting the first generation (pop III) of stars, studying the sources and physics of re-ionization, detecting the faint end of galaxies luminosity function. These goals will be achieved through a unique combination of instruments allowing GRB detection and arcmin localization over a broad FOV (more than 1sr) and an energy band extending from several MeVs down to 0.3 keV with unprecedented sensitivity, as well as on-board prompt (few minutes) follow-up with a 0.6m class IR telescope with both imaging and spectroscopic capabilities. Such instrumentation will also allow THESEUS to unveil and study the population of soft and sub-energetic GRBs, and, more in general, to perform monitoring and survey of the X-ray sky with unprecedented sensitivity.

  4. Development of FuGO: An Ontology for Functional Genomics Investigations

    PubMed Central

    Whetzel, Patricia L.; Brinkman, Ryan R.; Causton, Helen C.; Fan, Liju; Field, Dawn; Fostel, Jennifer; Fragoso, Gilberto; Gray, Tanya; Heiskanen, Mervi; Hernandez-Boussard, Tina; Morrison, Norman; Parkinson, Helen; Rocca-Serra, Philippe; Sansone, Susanna-Assunta; Schober, Daniel; Smith, Barry; Stevens, Robert; Stoeckert, Christian J.; Taylor, Chris; White, Joe; Wood, Andrew

    2009-01-01

    The development of the Functional Genomics Investigation Ontology (FuGO) is a collaborative, international effort that will provide a resource for annotating functional genomics investigations, including the study design, protocols and instrumentation used, the data generated and the types of analysis performed on the data. FuGO will contain both terms that are universal to all functional genomics investigations and those that are domain specific. In this way, the ontology will serve as the “semantic glue” to provide a common understanding of data from across these disparate data sources. In addition, FuGO will reference out to existing mature ontologies to avoid the need to duplicate these resources, and will do so in such a way as to enable their ease of use in annotation. This project is in the early stages of development; the paper will describe efforts to initiate the project, the scope and organization of the project, the work accomplished to date, and the challenges encountered, as well as future plans. PMID:16901226

  5. The next generation of galaxy evolution models: A symbiosis of stellar populations and chemical abundances

    NASA Astrophysics Data System (ADS)

    Kotulla, Ralf

    2012-10-01

    Over its lifespan Hubble has invested significant effort into detailed observations of galaxies both in the local and distant universe. To extract the physical information from the observed {spectro-}photometry requires detailed and accurate models. Stellar population synthesis models are frequently used to obtain stellar masses, star formation rate, galaxy ages and star formation histories. Chemical evolution models offer another valuable and complementary approach to gain insight into many of the same aspects, yet these two methods have rarely been used in combination.Our proposed next generation of galaxy evolution models will help us improve our understanding of how galaxies form and evolve. Building on GALEV evolutionary synthesis models we incorporate state-of-the-art input physics for stellar evolution of binaries and rotating stars as well as new spectral libraries well matched to the modern observational capabilities. Our improved chemical evolution model allows us to self-consistently trace abundances of individual elements, fully accounting for the increasing initial abundances of successive stellar generations. GALEV will support variable Initial Mass Functions {IMF}, enabling us to test recent observational findings of a non-universal IMF by predicting chemical properties and integrated spectra in an integrated and consistent manner.HST is the perfect instrument for testing this approach. Its wide wavelength coverage from UV to NIR enables precise SED fitting, and with its spatial resolution we can compare the inferred chemical evolution to studies of star clusters and resolved stellar populations in nearby galaxies.

  6. Quantum Monte Carlo calculations of NiO

    NASA Astrophysics Data System (ADS)

    Maezono, Ryo; Towler, Mike D.; Needs, Richard. J.

    2008-03-01

    We describe variational and diffusion quantum Monte Carlo (VMC and DMC) calculations [1] of NiO using a 1024-electron simulation cell. We have used a smooth, norm-conserving, Dirac-Fock pseudopotential [2] in our work. Our trial wave functions were of Slater-Jastrow form, containing orbitals generated in Gaussian-basis UHF periodic calculations. Jastrow factor is optimized using variance minimization with optimized cutoff lengths using the same scheme as our previous work. [4] We apply the lattice regulated scheme [5] to evaluate non-local pseudopotentials in DMC and find the scheme improves the smoothness of the energy-volume curve. [1] CASINO ver.2.1 User Manual, University of Cambridge (2007). [2] J.R. Trail et.al., J. Chem. Phys. 122, 014112 (2005). [3] CRYSTAL98 User's Manual, University of Torino (1998). [4] Ryo Maezono et.al., Phys. Rev. Lett., 98, 025701 (2007). [5] Michele Casula, Phys. Rev. B 74, 161102R (2006).

  7. Diffusion of massive particles around an Abelian-Higgs string

    NASA Astrophysics Data System (ADS)

    Saha, Abhisek; Sanyal, Soma

    2018-03-01

    We study the diffusion of massive particles in the space time of an Abelian Higgs string. The particles in the early universe plasma execute Brownian motion. This motion of the particles is modeled as a two dimensional random walk in the plane of the Abelian Higgs string. The particles move randomly in the space time of the string according to their geodesic equations. We observe that for certain values of their energy and angular momentum, an overdensity of particles is observed close to the string. We find that the string parameters determine the distribution of the particles. We make an estimate of the density fluctuation generated around the string as a function of the deficit angle. Though the thickness of the string is small, the length is large and the overdensity close to the string may have cosmological consequences in the early universe.

  8. Vector curvaton with varying kinetic function

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dimopoulos, Konstantinos; Karciauskas, Mindaugas; Wagstaff, Jacques M.

    2010-01-15

    A new model realization of the vector curvaton paradigm is presented and analyzed. The model consists of a single massive Abelian vector field, with a Maxwell-type kinetic term. By assuming that the kinetic function and the mass of the vector field are appropriately varying during inflation, it is shown that a scale-invariant spectrum of superhorizon perturbations can be generated. These perturbations can contribute to the curvature perturbation of the Universe. If the vector field remains light at the end of inflation it is found that it can generate substantial statistical anisotropy in the spectrum and bispectrum of the curvature perturbation.more » In this case the non-Gaussianity in the curvature perturbation is predominantly anisotropic, which will be a testable prediction in the near future. If, on the other hand, the vector field is heavy at the end of inflation then it is demonstrated that particle production is approximately isotropic and the vector field alone can give rise to the curvature perturbation, without directly involving any fundamental scalar field. The parameter space for both possibilities is shown to be substantial. Finally, toy models are presented which show that the desired variation of the mass and kinetic function of the vector field can be realistically obtained, without unnatural tunings, in the context of supergravity or superstrings.« less

  9. PMU Data Event Detection: A User Guide for Power Engineers

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Allen, A.; Singh, M.; Muljadi, E.

    2014-10-01

    This user guide is intended to accompany a software package containing a Matrix Laboratory (MATLAB) script and related functions for processing phasor measurement unit (PMU) data. This package and guide have been developed by the National Renewable Energy Laboratory and the University of Texas at Austin. The objective of this data processing exercise is to discover events in the vast quantities of data collected by PMUs. This document attempts to cover some of the theory behind processing the data to isolate events as well as the functioning of the MATLAB scripts. The report describes (1) the algorithms and mathematical backgroundmore » that the accompanying MATLAB codes use to detect events in PMU data and (2) the inputs required from the user and the outputs generated by the scripts.« less

  10. Earning and Learning: Role Congruence, State/Trait Factors and Adjustment to University Life

    ERIC Educational Resources Information Center

    Swanson, Vivien; Broadbridge, Adelina; Karatzias, Athanasios

    2006-01-01

    Background: Undertaking term-time employment is increasingly commonplace for university students. Much research suggests that combining "earning and learning" may be detrimental to university life, generating role conflicts, increasing stress and reducing academic success, participation and overall adjustment to university. Potential…

  11. Baryons, universe and everything in between

    NASA Astrophysics Data System (ADS)

    Ho, Shirley

    2008-06-01

    This thesis is a tour of topics in cosmology, unified by their diversity and pursuits in better understanding of our Universe. The first chapter measures the Integrated Sachs-Wolfe effect as a function of redshift utilizing a large range of large scale structure observations and the cosmic microwave background. We combine the ISW likelihood function with weak lensing of CMB (which is described in Chapter 2) and CMB powerspectrum to constrain the equation of state of dark energy and the curvature of the Universe. The second chapter investigates the correlation of gravitational lensing of the cosmic microwave background (CMB) with several tracers of large-scale structure, and we find evidence for a positive cross-correlation at the 2.5s level. The third chapter explores the statistical properties of Luminous Red Galaxies in a sample of X-ray selected galaxy clusters, including the halo occupation distribution, how Poisson is the satellite distribution of LRGs and the radial profile of LRGs within clusters. The forth chapter explores the idea of using multiplicity of galaxies to understand their merging timescales. We find that (by using the multiplicity function of LRGs in Chapter 3) Massive halos (~ 10 14 M [Special characters omitted.] ) at low redshift have, for example, been bombarded by several ~ 10 13 M [Special characters omitted.] halos throughout their history and these accreted LRGs merge on relatively short timescales (~ 2 Gyr). The fifth chapter presents a new method for generating a template for the kinematic Sunyaev-Zel'dovich effect that can be used to detect the missing baryons. We assessed the feasibility of the method by investigating combinations of differeng galaxy surveys and CMB observations and find that we can detect the gas-momentum kSZ correlation, and thus the ionized gas, at significant signal-to-noise level.

  12. For Future Generations: Funding Culturally Embedded Higher Education at Tribal Colleges and Universities

    ERIC Educational Resources Information Center

    Clairmont, Tanksi

    2014-01-01

    From their inception, tribal colleges and universities (TCUs) have played a special cultural as well as educational role in Native communities. These dual roles are integral to the preservation of American Indian language and traditions, as they open the door for future generations to acquire and perpetuate cultural knowledge. The American Indian…

  13. Russian Education in the Context of the Third Generation Universities' Discourse: Employers' Evaluation

    ERIC Educational Resources Information Center

    Maximova, Olga; Belyaev, Vladimir; Laukart-Gorbacheva, Olga; Nagmatullina, Lyudmila; Hamzina, Guzel

    2016-01-01

    Urgent problems of modernization of the Russian system of higher education in the context of the discourse of the third generation universities were revealed on the basis of the expert survey of employers (heads of personnel departments of large industrial enterprises of the city of Kazan and the Republic of Tatarstan) within research project…

  14. The New Emerging Adult in Chiapas, Mexico: Perceptions of Traditional Values and Value Change among First-Generation Maya University Students

    ERIC Educational Resources Information Center

    Manago, Adriana M.

    2012-01-01

    Social changes in indigenous Maya communities in Chiapas, Mexico toward increasing levels of formal education, commercialization, and urbanization are transforming traditional Maya developmental pathways toward adulthood. This mixed-methods study is based on interviews with a sample of 14 first-generation Maya university students who have also…

  15. Marketing of Revenue-Generating ESL Programs at the University of Calgary: A Qualitative Study

    ERIC Educational Resources Information Center

    Eaton, Sarah Elaine

    2009-01-01

    This qualitative case study endeavored to understand how program managers at one post-secondary Canadian university define, understand and undertake the marketing of their revenue-generating English as a Second Language (ESL) programs. Data were collected through interviews with three managers of distinct English as a Second Language (ESL)…

  16. The Numbers Game: Phasing in Generated ID Numbers at the University of Oregon

    ERIC Educational Resources Information Center

    Eveland, Sue

    2005-01-01

    With all the recent headlines about security breaches and information loss at financial and educational institutions, the higher education community needs to address the issue of using social security numbers as ID numbers. The University of Oregon undertook a change process to assign generated ID numbers to all records in their information…

  17. University Students' Conceptions of an Excellent Physical Education Teacher in China

    ERIC Educational Resources Information Center

    Song, Lihua; Chen, Junjun

    2013-01-01

    This study investigated how university students perceive an excellent physical education (PE) teacher at the university level. A sample of 2000 university students at four universities in China responded to a 53-item questionnaire. A 6-factor, 28-item model of an excellent teacher in PE was subsequently generated with a statistical good fit, using…

  18. Toward a Systematic Framework for an Entrepreneurial University: A Study in Iranian Context with IPOO Model

    ERIC Educational Resources Information Center

    Salamzadeh, Aidin; Salarnzadeh, Yashar; Daraei, Mohammad Reza

    2011-01-01

    Purpose - The present paper aims to elaborate and consolidate the existing knowledge of the entrepreneurial university domain, and also seeks to provide a framework for the third generation of universities, i.e. Entrepreneurial Universities. In this research the third mission of universities is considered alongside traditional teaching and…

  19. The Pre-University Pathways of Disadvantaged Students for Gaining Entry to University Study

    ERIC Educational Resources Information Center

    Norodien-Fataar, Najwa

    2016-01-01

    This article focuses on the pre-university access pathways of disadvantaged first-generation students studying at a South African university. Based on data collected via qualitative methods, it draws on findings from a study of purposively selected students at a university in the Western Cape Province. It explores the ways they access and gain…

  20. PRROC: computing and visualizing precision-recall and receiver operating characteristic curves in R.

    PubMed

    Grau, Jan; Grosse, Ivo; Keilwagen, Jens

    2015-08-01

    Precision-recall (PR) and receiver operating characteristic (ROC) curves are valuable measures of classifier performance. Here, we present the R-package PRROC, which allows for computing and visualizing both PR and ROC curves. In contrast to available R-packages, PRROC allows for computing PR and ROC curves and areas under these curves for soft-labeled data using a continuous interpolation between the points of PR curves. In addition, PRROC provides a generic plot function for generating publication-quality graphics of PR and ROC curves. © The Author 2015. Published by Oxford University Press.

  1. Stress Prediction System

    NASA Technical Reports Server (NTRS)

    1995-01-01

    NASA wanted to know how astronauts' bodies would react under various gravitational pulls and space suit weights. Under contract to NASA, the University of Michigan's Center for Ergonomics developed a model capable of predicting what type of stress and what degree of load a body could stand. The algorithm generated was commercialized with the ISTU (Isometric Strength Testing Unit) Functional Capacity Evaluation System, which simulates tasks such as lifting a heavy box or pushing a cart and evaluates the exertion expended. It also identifies the muscle group that limits the subject's performance. It is an effective tool of personnel evaluation, selection and job redesign.

  2. Facing the Corporate University: The New Wave of Student Movements in Europe

    ERIC Educational Resources Information Center

    Fernández, Joseba

    2014-01-01

    The transformation of the historical functions and goals of the European university is producing the transition from mass university to what has been called "corporate university". With this goal, I will examine how the new functions of the university are aimed at providing services and precarious workers to the labor structure of…

  3. 40 CFR 262.107 - Under what circumstances will a university's participation in this environmental management...

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... university's participation in this environmental management standard pilot be terminated? 262.107 Section 262...) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University Laboratories XL Project-Laboratory Environmental Management Standard § 262.107 Under what circumstances will a university's participation in this...

  4. Universal scaling function in discrete time asymmetric exclusion processes

    NASA Astrophysics Data System (ADS)

    Chia, Nicholas; Bundschuh, Ralf

    2005-03-01

    In the universality class of the one dimensional Kardar-Parisi-Zhang surface growth, Derrida and Lebowitz conjectured the universality of not only the scaling exponents, but of an entire scaling function. Since Derrida and Lebowitz' original publication this universality has been verified for a variety of continuous time systems in the KPZ universality class. We study the Derrida-Lebowitz scaling function for multi-particle versions of the discrete time Asymmetric Exclusion Process. We find that in this discrete time system the Derrida-Lebowitz scaling function not only properly characterizes the large system size limit, but even accurately describes surprisingly small systems. These results have immediate applications in searching biological sequence databases.

  5. [Detection of thyroid dysfunction in pregnant women: universal screening is justified].

    PubMed

    Vila, Lluís; Velasco, Inés; González, Stella; Morales, Francisco; Sánchez, Emilia; Lailla, José Maria; Martinez-Astorquiza, Txanton; Puig-Domingo, Manel

    2012-11-03

    There is a controversy among different scientific societies in relation to the recommendations on whether universal screening for the detection of thyroid dysfunction during gestation should be performed or not. Although various studies have shown an association between subclinical hypothyroidism or hypothyroxinemia with obstetric problems and/or neurocognitive impairment in the offspring, no evidence on the possible positive effects of treatment of such conditions with thyroxin has been demonstrated so far. However, there is a general agreement about the need for treatment of clinical hypothyroidism during pregnancy and the risks of not doing so. Because it is a common, easily diagnosed and effectively treated disorder without special risk, the working Group of Iodine Deficiency Disorders and Thyroid Dysfunction of the Spanish Society of Endocrinology and Nutrition and Spanish Society of Gynaecology and Obstetrics recommends an early evaluation (before week 10) of thyroid function in all pregnant women. Given the complex physiology of thyroid function during pregnancy, hormone assessment should be performed according to reference values for each gestational trimester and generated locally in each reference laboratory. Thyrotropin determination would be sufficient for screening purposes and only if it is altered, free thyroxin or total thyroxin would be required. Adequate iodine nutrition is also highly recommended before and during pregnancy to contribute to a normal thyroid function in the pregnant women and fetus.

  6. Detection of thyroid dysfunction in pregnant women: universal screening is justified.

    PubMed

    Vila, Lluís; Velasco, Inés; González, Stella; Morales, Francisco; Sánchez, Emilia; Lailla, José Maria; Martinez-Astorquiza, Txanton; Puig-Domingo, Manel

    2012-11-01

    There is a controversy among different scientific societies in relation to the recommendations on whether universal screening for the detection of thyroid dysfunction during gestation should be performed or not. Although various studies have shown an association between subclinical hypothyroidism or hypothyroxinemia with obstetric problems and/or neurocognitive impairment in the offspring, no evidence on the possible positive effects of treatment of such conditions with thyroxin has been demonstrated so far. However, there is a general agreement about the need for treatment of clinical hypothyroidism during pregnancy and the risks of not doing so. Because it is a common, easily diagnosed and effectively treated disorder without special risk, the working Group of Iodine Deficiency Disorders and Thyroid Dysfunction of the Spanish Society of Endocrinology and Nutrition and Spanish Society of Gynaecology and Obstetrics recommends an early evaluation (before week 10) of thyroid function in all pregnant women. Given the complex physiology of thyroid function during pregnancy, hormone assessment should be performed according to reference values for each gestational trimester and generated locally in each reference laboratory. Thyrotropin determination would be sufficient for screening purposes and only if it is altered, free thyroxin or total thyroxin would be required. Adequate iodine nutrition is also highly recommended before and during pregnancy to contribute to a normal thyroid function in the pregnant women and fetus. Copyright © 2012 SEEN. Published by Elsevier Espana. All rights reserved.

  7. Functional Constructivism: In Search of Formal Descriptors.

    PubMed

    Trofimova, Irina

    2017-10-01

    The Functional Constructivism (FC) paradigm is an alternative to behaviorism and considers behavior as being generated every time anew, based on an individual's capacities, environmental resources and demands. Walter Freeman's work provided us with evidence supporting the FC principles. In this paper we make parallels between gradual construction processes leading to the formation of individual behavior and habits, and evolutionary processes leading to the establishment of biological systems. Referencing evolutionary theory, several formal descriptors of such processes are proposed. These FC descriptors refer to the most universal aspects for constructing consistent structures: expansion of degrees of freedom, integration processes based on internal and external compatibility between systems and maintenance processes, all given in four different classes of systems: (a) Zone of Proximate Development (poorly defined) systems; (b) peer systems with emerging reproduction of multiple siblings; (c) systems with internalized integration of behavioral elements ('cruise controls'); and (d) systems capable of handling low-probability, not yet present events. The recursive dynamics within this set of descriptors acting on (traditional) downward, upward and horizontal directions of evolution, is conceptualized as diagonal evolution, or di-evolution. Two examples applying these FC descriptors to taxonomy are given: classification of the functionality of neuro-transmitters and temperament traits; classification of mental disorders. The paper is an early step towards finding a formal language describing universal tendencies in highly diverse, complex and multi-level transient systems known in ecology and biology as 'contingency cycles.'

  8. The Use of Analytic Decision Game (ADG) Methods for Test and Evaluation of Hard and Soft Data Fusion Systems and Education of a New Generation of Data Fusion Analysts

    DTIC Science & Technology

    2012-10-01

    education of a new generation of data fusion analysts Jacob L. Graham College of Information Sciences & Technology Pennsylvania State University...University Park, PA, U.S.A. jgraham@ist.psu.edu David L. Hall College of Information Sciences & Technology Pennsylvania State University...ELEMENT NUMBER 6. AUTHOR(S) 5d. PROJECT NUMBER 5e. TASK NUMBER 5f. WORK UNIT NUMBER 7. PERFORMING ORGANIZATION NAME(S) AND ADDRESS(ES) College

  9. The effects of progressive neuromuscular training on postural balance and functionality in elderly patients with knee osteoarthritis: a pilot study

    PubMed Central

    Sazo-Rodríguez, Sergio; Méndez-Rebolledo, Guillermo; Guzmán-Muñoz, Eduardo; Rubio-Palma, Paulo

    2017-01-01

    [Purpose] To determine the effects of progressive neuromuscular training on postural balance and functionality in elderly patients with knee osteoarthritis (OA). [Subjects and Methods] Eleven participants between 60 and 75 years of age performed the progressive neuromuscular training for 8 weeks and 4 weeks of follow-up. The area and velocity of the center of pressure were measured on a force platform, and the functionality was measured with a Western Ontario and McMaster Universities Osteoarthritis Index. [Results] The area and velocity (anteroposterior and mediolateral directions) of the center of pressure showed significant differences after 4 and 8 weeks of intervention. Additionally, the global score and some questionnaire dimensions (pain and physical function) showed significant differences after 4 and 8 weeks of intervention. These changes were maintained in all variables at week 4 of follow-up. [Conclusion] The intervention generated improvements in balance and functionality in elderly patients with knee OA. These changes were observed after 4 weeks of training and were maintained 4 weeks after the end of the intervention. PMID:28744054

  10. Universal Sequence Replication, Reversible Polymerization and Early Functional Biopolymers: A Model for the Initiation of Prebiotic Sequence Evolution

    PubMed Central

    Walker, Sara Imari; Grover, Martha A.; Hud, Nicholas V.

    2012-01-01

    Many models for the origin of life have focused on understanding how evolution can drive the refinement of a preexisting enzyme, such as the evolution of efficient replicase activity. Here we present a model for what was, arguably, an even earlier stage of chemical evolution, when polymer sequence diversity was generated and sustained before, and during, the onset of functional selection. The model includes regular environmental cycles (e.g. hydration-dehydration cycles) that drive polymers between times of replication and functional activity, which coincide with times of different monomer and polymer diffusivity. Template-directed replication of informational polymers, which takes place during the dehydration stage of each cycle, is considered to be sequence-independent. New sequences are generated by spontaneous polymer formation, and all sequences compete for a finite monomer resource that is recycled via reversible polymerization. Kinetic Monte Carlo simulations demonstrate that this proposed prebiotic scenario provides a robust mechanism for the exploration of sequence space. Introduction of a polymer sequence with monomer synthetase activity illustrates that functional sequences can become established in a preexisting pool of otherwise non-functional sequences. Functional selection does not dominate system dynamics and sequence diversity remains high, permitting the emergence and spread of more than one functional sequence. It is also observed that polymers spontaneously form clusters in simulations where polymers diffuse more slowly than monomers, a feature that is reminiscent of a previous proposal that the earliest stages of life could have been defined by the collective evolution of a system-wide cooperation of polymer aggregates. Overall, the results presented demonstrate the merits of considering plausible prebiotic polymer chemistries and environments that would have allowed for the rapid turnover of monomer resources and for regularly varying monomer/polymer diffusivities. PMID:22493682

  11. The role of internal duplication in the evolution of multi-domain proteins.

    PubMed

    Nacher, J C; Hayashida, M; Akutsu, T

    2010-08-01

    Many proteins consist of several structural domains. These multi-domain proteins have likely been generated by selective genome growth dynamics during evolution to perform new functions as well as to create structures that fold on a biologically feasible time scale. Domain units frequently evolved through a variety of genetic shuffling mechanisms. Here we examine the protein domain statistics of more than 1000 organisms including eukaryotic, archaeal and bacterial species. The analysis extends earlier findings on asymmetric statistical laws for proteome to a wider variety of species. While proteins are composed of a wide range of domains, displaying a power-law decay, the computation of domain families for each protein reveals an exponential distribution, characterizing a protein universe composed of a thin number of unique families. Structural studies in proteomics have shown that domain repeats, or internal duplicated domains, represent a small but significant fraction of genome. In spite of its importance, this observation has been largely overlooked until recently. We model the evolutionary dynamics of proteome and demonstrate that these distinct distributions are in fact rooted in an internal duplication mechanism. This process generates the contemporary protein structural domain universe, determines its reduced thickness, and tames its growth. These findings have important implications, ranging from protein interaction network modeling to evolutionary studies based on fundamental mechanisms governing genome expansion.

  12. Evidence of a truncated spectrum in the angular correlation function of the cosmic microwave background

    NASA Astrophysics Data System (ADS)

    Melia, F.; López-Corredoira, M.

    2018-03-01

    Aim. The lack of large-angle correlations in the fluctuations of the cosmic microwave background (CMB) conflicts with predictions of slow-roll inflation. But while probabilities (≲0.24%) for the missing correlations disfavour the conventional picture at ≳3σ, factors not associated with the model itself may be contributing to the tension. Here we aim to show that the absence of large-angle correlations is best explained with the introduction of a non-zero minimum wave number kmin for the fluctuation power spectrum P(k). Methods: We assumed that quantum fluctuations were generated in the early Universe with a well-defined power spectrum P(k), although with a cut-off kmin ≠ 0. We then re-calculated the angular correlation function of the CMB and compared it with Planck observations. Results: The Planck 2013 data rule out a zero kmin at a confidence level exceeding 8σ. Whereas purely slow-roll inflation would have stretched all fluctuations beyond the horizon, producing a P(k) with kmin = 0 - and therefore strong correlations at all angles - a kmin ≠ 0 would signal the presence of a maximum wavelength at the time (tdec) of decoupling. This argues against the basic inflationary paradigm, and perhaps even suggests non-inflationary alternatives, for the origin and growth of perturbations in the early Universe. In at least one competing cosmology, the Rh = ct universe, the inferred kmin corresponds to the gravitational radius at tdec.

  13. Toward a Universal Sea Spray Source Function (UNISOURCE)

    DTIC Science & Technology

    2003-09-30

    Toward a Universal Sea Spray Source Function ( UNISOURCE ) Gerrit de Leeuw TNO Physics and Electronics Laboratory P.O. Box 96864 2509 JG The...00-00-2003 to 00-00-2003 4. TITLE AND SUBTITLE Toward a Universal Sea Spray Source Function ( UNISOURCE ) 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c

  14. Purpose and Function of the University

    ERIC Educational Resources Information Center

    Potter, V. R.; And Others

    1970-01-01

    The authors believe that the primary function of the university is to examine and preserve the value judgments that can elevate the condition of society. It can serve this function by a future-oriented search for truth. University scholars have a major responsibility for survival and qualiity of life in the future. Bibliography. (LC)

  15. Integrating the transportation system with a university campus transportation master plan : a case study.

    DOT National Transportation Integrated Search

    2010-04-01

    University campuses are considered major trip attractors. This intense level of activity generates significant : congestion levels within the campuses and in their vicinity, particularly in urban campus settings. With : university enrollment trends e...

  16. An Expanding Universe in the Classroom.

    ERIC Educational Resources Information Center

    Chandler, David

    1991-01-01

    Two computer-generated star charts that can be used as overlay transparencies to show an expanding universe are presented. Directions on how to use the star charts to determine the Hubble constant and the age of the universe are provided. (KR)

  17. Center For Advanced Energy Studies Overview

    ScienceCinema

    Blackman, Harold; Curnutt, Byron; Harker, Caitlin; Hamilton, Melinda; Butt, Darryl; Imel, George; Tokuhiro, Akira; Harris, Jason; Hill, David

    2017-12-09

    A collaboration between Idaho National Laboratory, Boise State University, Idaho State University and the University of Idaho. Conducts research in nuclear energy, advanced materials, carbon management, bioenergy, energy policy, modeling and simulation, and energy efficiency. Educates next generation of energy workforce.

  18. Seniors in Action: A Case Study of Participation at the University of Toronto by the Senior Alumni Association.

    ERIC Educational Resources Information Center

    Gleberzon, William

    Objectives, administrative organization, and activities of the Senior Alumni Association of the University of Toronto, which consists of members at least 60 years old, are described. The programs of the association are self-sustaining and generated from fees charged for its continuing education courses. Surplus funds generated by these fees are…

  19. College Students' Use and Understanding of an Electronic Social Network for Academics, Academic Help Seeking, and Academic Advising

    ERIC Educational Resources Information Center

    Amador, Paul Vincent

    2011-01-01

    The arrival of a new generation of students, known as the Net Generation (Junco, 2010), into colleges and universities has demanded changes to the traditional administrative and support services provided on campuses across the nation. In times of ever-changing technological advances, colleges and universities have begun to utilize new and…

  20. Experiences of First-Generation Hispanic Students and Mentors in a University Mentoring Program

    ERIC Educational Resources Information Center

    Roach, JoAnn R.

    2018-01-01

    The focus of this basic qualitative research was to gain insight into the experiences of first-generation Hispanic students (FGHS) and faculty mentors to explore in what ways, if any, a faculty-student mentoring program at a four-year university was meeting the needs of FGHS. Reasons for early student departure served as the foundation for this…

  1. Factors That Relate to the Persistence of First-Generation Undergraduate Students in a Public University

    ERIC Educational Resources Information Center

    Thachil, Shoba Anne

    2013-01-01

    This study examined factors that relate to the persistence of first-generation undergraduate students in a 4-year public university in the Southeastern United States. Results were analyzed from a 2011 two-part survey: CARES-I (College Assessment of Readiness for Entering Students-Intent) and CARES-A (College Assessment of Readiness for Entering…

  2. Minority First-Generation Students' Satisfaction with Services at a Liberal Arts University in the Southeast United States

    ERIC Educational Resources Information Center

    Chambers, Sabrina

    2017-01-01

    This qualitative study was performed at a liberal arts university in the southeast United States. Thirty-nine undergraduate minority first-generation students were interviewed to acquire knowledge of their satisfaction levels with four student services: tutoring, campus housing, financial aid, and career planning. The purpose of this study was to…

  3. Self-reported health status, body mass index, and healthy lifestyle behaviors: differences between Baby Boomer and Generation X employees at a southeastern university.

    PubMed

    Carter, Melondie R; Kelly, Rebecca K

    2013-09-01

    The aim of this study was to assess differences in self-reported health status, body mass index (BMI), and healthy lifestyle behaviors between Baby Boomer and Generation X faculty and staff at a southeastern university. Data were drawn from employee health risk assessment and BMI measures. A total of 730 Baby Boomer and 765 Generation X employees enrolled in a university health promotion and screening program were included in the study. Ordered logistic regressions were calculated separately for BMI, perceived health status, and three healthy lifestyle behaviors. After covariates such as job role, gender, race, education, and income were controlled, Baby Boomers were more likely than Generation X employees to report better health status and dietary habits. Baby Boomers were also more likely to engage in weekly aerobic physical activity (p < .001) yet were also at greater risk of being overweight and obese. The results highlight the need to consider generational differences when developing health promotion programs. Copyright 2013, SLACK Incorporated.

  4. McUniversities Revisited: A Comparison of University and McDonald's Casual Employee Experiences in Australia

    ERIC Educational Resources Information Center

    Nadolny, Andrew; Ryan, Suzanne

    2015-01-01

    The McDonaldization of higher education refers to the transformation of universities from knowledge generators to rational service organizations or "McUniversities". This is reflected in the growing dependence on a casualized academic workforce. The article explores the extent to which the McDonaldization thesis applies to universities…

  5. The Worldly Space: The Digital University in Network Time

    ERIC Educational Resources Information Center

    Hassan, Robert

    2017-01-01

    This article considers the effect of information technology upon teaching, learning and research in the "digital university". In less than a generation the university has become a business like any other. It does so in the determining context of neoliberal globalisation and the computer revolution. The university develops through what we…

  6. Innovation for Transformation in Nigeria University Education: Implications for the Production of Critical and Creative Thinkers

    ERIC Educational Resources Information Center

    Onu, V. C.; Eskay, M. K.; Obiyo, N. O.; Igbo, J. N.; Ezeanwu, A. B.

    2012-01-01

    This descriptive survey research studied innovation for transformation in Nigeria university education: implications for the production of critical and creative thinkers. Thus, students' perception of knowledge generation and dissemination by university lecturers were elicited. From a population of registered students in a Nigerian university, 200…

  7. Economic and Cultural Factors Affecting University Excellence

    ERIC Educational Resources Information Center

    Jabnoun, Naceur

    2009-01-01

    Purpose: The ranking of top universities in the world has generated increased interest in the factors that enhance university performance. The purpose of this paper is to identify economic and cultural factors that affect the number of top ranking universities in each country. Design/methodology/approach: This paper first identifies the number of…

  8. Standards Applicable to Generators of Hazardous Waste; Alternative Requirements for Hazardous Waste Determination and Accumulation of Unwanted Material at Laboratories Owned by Colleges and Universities and Other Eligible Academic Entities Formally Affiliated With Colleges and Universities. Final Rule. Federal Register, Environmental Protection Agency. 40 CFR Parts 261 and 262. Part II

    ERIC Educational Resources Information Center

    National Archives and Records Administration, 2008

    2008-01-01

    The Environmental Protection Agency (EPA or the Agency) is finalizing an alternative set of generator requirements applicable to laboratories owned by eligible academic entities, as defined in this final rule. The rule provides a flexible and protective set of regulations that address the specific nature of hazardous waste generation and…

  9. A prospective study on symptom generation according to spicy food intake and TRPV1 genotypes in functional dyspepsia patients.

    PubMed

    Lee, S-Y; Masaoka, T; Han, H S; Matsuzaki, J; Hong, M J; Fukuhara, S; Choi, H S; Suzuki, H

    2016-09-01

    Capsaicin is an ingredient of red peppers that binds to transient receptor potential vanilloid subtype 1 (TRPV1), and Koreans eat more capsaicin-rich food than do Japanese. This study aimed to compare symptom generation according to TRPV1 genotypes and the intake of spicy foods. Consecutive functional dyspepsia (FD) patients who were evaluated at Konkuk University Medical Centre (Korea) and Keio University Hospital (Japan) were included. Questionnaires on spicy food intake, patient assessment of gastrointestinal symptoms (PAGI-SYM), patient assessment of quality of life, and hospital anxiety and depression scale were provided. Blood was sampled for the detection of TRPV1 polymorphisms, and upper gastrointestinal endoscopy was performed with biopsies. Of 121 included subjects, 35 and 28 carried the TRPV1 CC and GG genotypes, respectively, with the prevalence rates not differing between Japan and Korea. The prevalence of FD subtypes did not differ with the spicy food intake, TRPV1 genotypes, or Helicobacter pylori infection. Neither TRPV1 polymorphisms nor H. pylori infections were related to scores on the PAGI-SYM questionnaires, but spicy food intake was positively correlated with the scores for stomach fullness (p = 0.001) and retching (p = 0.001). Using the linear regression analysis, stomach fullness was associated with spicy food intake (p = 0.007), whereas retching was related to younger age (p < 0.001) and female gender (p = 0.014). Upper gastrointestinal symptoms are more common in subjects with a higher consumption of spicy foods, younger age and female gender, regardless of TRPV1 genotypes and the H. pylori infection status. Capsaicin-rich foods may induce stomach fullness. © 2016 John Wiley & Sons Ltd.

  10. Schizotypal thinking and associative processing: a response commonality analysis of verbal fluency.

    PubMed Central

    Duchêne, A; Graves, R E; Brugger, P

    1998-01-01

    OBJECTIVE: To determine whether people with high scores for schizotypal thinking generate more uncommon words in a letter fluency task than people with low scores. DESIGN: Prospective study. SETTING: University psychology department. PATIENTS: Forty healthy, right-handed students. INTERVENTIONS: Students were administered the Magical Ideation (MI) Scale and a 2-minute letter fluency task in which they named as many nouns as possible beginning with "A" or "F," in any order. OUTCOME MEASURES: Total number of words produced and percentage of unique, rare and common words (as determined by the responses of the whole group); scores on MI scale. RESULTS: Participants with high scores (above the median) on the MI scale generated as many words as those who had low scores. People in both groups also generated a comparable number of unique words (named by only 1 person) and common words (named by 6 or more people). As hypothesized, people with high scores on the MI scale generated more rare words (named by fewer than 6 people) than those with low scores. CONCLUSIONS: These findings support the view of a disinhibition of semantic network functioning as the neuropsychological basis of creative thought, magical ideation and thought disorder. PMID:9505061

  11. Ethnicity versus migration: two hypotheses about the psychosocial adjustment of immigrant adolescents.

    PubMed

    Slonim-Nevo, Vered; Sharaga, Yana; Mirsky, Julia; Petrovsky, Vadim; Borodenko, Marina

    2006-01-01

    STUDY BACKGROUND AND AIMS: This study investigates the psychosocial adjustment of immigrant adolescents and examines two hypotheses: the ethnicity hypothesis, which suggests that ethnic background determines the psychosocial reactions of immigrant adolescents; and the migration hypothesis, which suggests that the migration experience determines such reactions. The study compared four groups of respondents: first-generation immigrants (N = 63) and second-generation immigrants (N = 64) from the former Soviet Union (FSU) in Israel; and Jewish (N = 212) and non-Jewish (N = 184) adolescents in the FSU. A self-report questionnaire administered to the respondents collected demographic, educational and psychological data using standardised scales. Immigrant adolescents reported higher psychological distress, lower self-esteem and higher alchohol consumption than non-immigrant adolescents. Second-generation immigrants generally showed a higher level of functioning than first-generation immigrants. These findings favor the migration hypothesis. Our findings support the widely accepted view of migration as a potentially distress-provoking experience. They suggest that psychological reactions of immigrant adolescents, and in fact all immigrants, are best interpreted as reactive and are related to the universal stressful qualities of the migration experience. Further multiethnic comparative studies, however, are needed to confirm and refine these findings.

  12. Evaluation of environmental filtration control of engineered nanoparticles using the Harvard Versatile Engineered Nanomaterial Generation System (VENGES)

    NASA Astrophysics Data System (ADS)

    Tsai, Candace S.-J.; Echevarría-Vega, Manuel E.; Sotiriou, Georgios A.; Santeufemio, Christopher; Schmidt, Daniel; Demokritou, Philip; Ellenbecker, Michael

    2012-05-01

    Applying engineering controls to airborne engineered nanoparticles (ENPs) is critical to prevent environmental releases and worker exposure. This study evaluated the effectiveness of two air sampling and six air cleaning fabric filters at collecting ENPs using industrially relevant flame-made engineered nanoparticles generated using a versatile engineered nanomaterial generation system (VENGES), recently designed and constructed at Harvard University. VENGES has the ability to generate metal and metal oxide exposure atmospheres while controlling important particle properties such as primary particle size, aerosol size distribution, and agglomeration state. For this study, amorphous SiO2 ENPs with a 15.4 nm primary particle size were generated and diluted with HEPA-filtered air. The aerosol was passed through the filter samples at two different filtration face velocities (2.3 and 3.5 m/min). Particle concentrations as a function of particle size were measured upstream and downstream of the filters using a specially designed filter test system to evaluate filtration efficiency. Real time instruments (FMPS and APS) were used to measure particle concentration for diameters from 5 to 20,000 nm. Membrane-coated fabric filters were found to have enhanced nanoparticle collection efficiency by 20-46 % points compared to non-coated fabric and could provide collection efficiency above 95 %.

  13. Generation of Murine Monoclonal Antibodies by Hybridoma Technology.

    PubMed

    Holzlöhner, Pamela; Hanack, Katja

    2017-01-02

    Monoclonal antibodies are universal binding molecules and are widely used in biomedicine and research. Nevertheless, the generation of these binding molecules is time-consuming and laborious due to the complicated handling and lack of alternatives. The aim of this protocol is to provide one standard method for the generation of monoclonal antibodies using hybridoma technology. This technology combines two steps. Step 1 is an appropriate immunization of the animal and step 2 is the fusion of B lymphocytes with immortal myeloma cells in order to generate hybrids possessing both parental functions, such as the production of antibody molecules and immortality. The generated hybridoma cells were then recloned and diluted to obtain stable monoclonal cell cultures secreting the desired monoclonal antibody in the culture supernatant. The supernatants were tested in enzyme-linked immunosorbent assays (ELISA) for antigen specificity. After the selection of appropriate cell clones, the cells were transferred to mass cultivation in order to produce the desired antibody molecule in large amounts. The purification of the antibodies is routinely performed by affinity chromatography. After purification, the antibody molecule can be characterized and validated for the final test application. The whole process takes 8 to 12 months of development, and there is a high risk that the antibody will not work in the desired test system.

  14. Evaluation of environmental filtration control of engineered nanoparticles using the Harvard Versatile Engineered Nanomaterial Generation System (VENGES)

    PubMed Central

    Echevarría-Vega, Manuel E.; Sotiriou, Georgios A.; Santeufemio, Christopher; Schmidt, Daniel; Demokritou, Philip; Ellenbecker, Michael

    2013-01-01

    Applying engineering controls to airborne engineered nanoparticles (ENPs) is critical to prevent environmental releases and worker exposure. This study evaluated the effectiveness of two air sampling and six air cleaning fabric filters at collecting ENPs using industrially relevant flame-made engineered nanoparticles generated using a versatile engineered nanomaterial generation system (VENGES), recently designed and constructed at Harvard University. VENGES has the ability to generate metal and metal oxide exposure atmospheres while controlling important particle properties such as primary particle size, aerosol size distribution, and agglomeration state. For this study, amorphous SiO2 ENPs with a 15.4 nm primary particle size were generated and diluted with HEPA-filtered air. The aerosol was passed through the filter samples at two different filtration face velocities (2.3 and 3.5 m/min). Particle concentrations as a function of particle size were measured upstream and downstream of the filters using a specially designed filter test system to evaluate filtration efficiency. Real time instruments (FMPS and APS) were used to measure particle concentration for diameters from 5 to 20,000 nm. Membrane-coated fabric filters were found to have enhanced nanoparticle collection efficiency by 20–46 % points compared to non-coated fabric and could provide collection efficiency above 95 %. PMID:23412707

  15. Executive Function: Comparing Bilingual and Monolingual Iranian University Students

    ERIC Educational Resources Information Center

    Kazemeini, Toktam; Fadardi, Javad Salehi

    2016-01-01

    The study aimed to examine whether Kurdish-Persian early Bilingual university students (EBL) and Persian Monolingual university students (ML) differ on tasks of executive function (EF). Thirty male EBL and 30 male ML students from Ferdowsi University of Mashhad completed a Persian Stroop Color-Word task (SCWT), Backward Digit Span Test (BDST),…

  16. De novo active sites for resurrected Precambrian enzymes

    NASA Astrophysics Data System (ADS)

    Risso, Valeria A.; Martinez-Rodriguez, Sergio; Candel, Adela M.; Krüger, Dennis M.; Pantoja-Uceda, David; Ortega-Muñoz, Mariano; Santoyo-Gonzalez, Francisco; Gaucher, Eric A.; Kamerlin, Shina C. L.; Bruix, Marta; Gavira, Jose A.; Sanchez-Ruiz, Jose M.

    2017-07-01

    Protein engineering studies often suggest the emergence of completely new enzyme functionalities to be highly improbable. However, enzymes likely catalysed many different reactions already in the last universal common ancestor. Mechanisms for the emergence of completely new active sites must therefore either plausibly exist or at least have existed at the primordial protein stage. Here, we use resurrected Precambrian proteins as scaffolds for protein engineering and demonstrate that a new active site can be generated through a single hydrophobic-to-ionizable amino acid replacement that generates a partially buried group with perturbed physico-chemical properties. We provide experimental and computational evidence that conformational flexibility can assist the emergence and subsequent evolution of new active sites by improving substrate and transition-state binding, through the sampling of many potentially productive conformations. Our results suggest a mechanism for the emergence of primordial enzymes and highlight the potential of ancestral reconstruction as a tool for protein engineering.

  17. Survey of reconfigurable architectures for multimedia applications

    NASA Astrophysics Data System (ADS)

    Cervero, T.; López, S.; Callicó, G. M.; Tobajas, F.; de Armas, V.; López, J.; Sarmiento, R.

    2009-05-01

    In a short period of time, the multimedia sector has quickly progressed trying to overcome the exigencies of the customers in terms of transfer speeds, storage memory, image quality, and functionalities. In order to cope with this stringent situation, different hardware devices have been developed as possible choices. Despite of the fact that not every device is apt for implementing the high computational demands associated to multimedia applications; reconfigurable architectures appear as ideal candidates to achieve these necessities. As a direct consequence, worldwide universities and industries have incremented their research activity into this area, generating an important know-how base. In order to sort all the information generated about this issue, this paper reviews the most recent reconfigurable architectures for multimedia applications. As a result, this paper establishes the benefits and drawbacks of the different dynamically reconfigurable architectures for multimedia applications according to their system-level design.

  18. Reviews

    NASA Astrophysics Data System (ADS)

    2008-05-01

    WE RECOMMEND Why the Sky is Blue This book gives an excellent answer to the age-old question Science Magic Book of experiments finds the fun in physics Function Generator Kit Build your own simple wave generator Dent pullers Instead of using them to pull out dents, get your pupils to pull them apart Rocket Tracker Launch and track rockets with this kit Stephen Hawking, A biograpy This book looks at both the science and the personal life of the famous physicist WORTH A LOOK The Universe and the Atom All-encompassing but uninspiring physics book Sizzling Magnets Another cheap toy proves its usefulness in the physics lab Efergy Energy-saving meter is easy to use but may not save you energy Experiments and Demonstrations in Physics This book is full of interesting experiments but skewed to a particular hardware system WEB WATCH Gary Williams recounts the valuable lessons he learned at the Software 4 Skint Schools workshop

  19. Analysis of Hospital Processes with Process Mining Techniques.

    PubMed

    Orellana García, Arturo; Pérez Alfonso, Damián; Larrea Armenteros, Osvaldo Ulises

    2015-01-01

    Process mining allows for discovery, monitoring, and improving processes identified in information systems from their event logs. In hospital environments, process analysis has been a crucial factor for cost reduction, control and proper use of resources, better patient care, and achieving service excellence. This paper presents a new component for event logs generation in the Hospital Information System or HIS, developed at University of Informatics Sciences. The event logs obtained are used for analysis of hospital processes with process mining techniques. The proposed solution intends to achieve the generation of event logs in the system with high quality. The performed analyses allowed for redefining functions in the system and proposed proper flow of information. The study exposed the need to incorporate process mining techniques in hospital systems to analyze the processes execution. Moreover, we illustrate its application for making clinical and administrative decisions for the management of hospital activities.

  20. Bioenergetics

    PubMed Central

    2008-01-01

    Natural life is chemical. Chemistry, not abstract logic, determines and constrains its potentialities. One of the potentialities is cognition. Humans have two equivalent cognitive systems: the immune and the nervous ones. The principle of functioning is the same for both: rooted in the previously acquired and embodied knowledge, the system is intrinsically generating many new chemical states and the environment selects and stabilizes appropriate of them. From the fundamental level of complicated brain chemistry (“biochemese”) higher levels emerge: the physiological (“physiologese”) and the mental (“mentalese”). Processes are causal at the basic chemical level; they are mere isomorphic, tautological translations at the other levels. The thermodynamic necessity to maintain correlations in the complicated chemical system and to generate variants makes the nervous system energetically expensive: it runs continuously at full speed and external inputs only trigger and modulate the ongoing dynamics. Models of the brain as a universal computer are utterly inadequate. PMID:19513208

  1. Generating and using truly random quantum states in Mathematica

    NASA Astrophysics Data System (ADS)

    Miszczak, Jarosław Adam

    2012-01-01

    The problem of generating random quantum states is of a great interest from the quantum information theory point of view. In this paper we present a package for Mathematica computing system harnessing a specific piece of hardware, namely Quantis quantum random number generator (QRNG), for investigating statistical properties of quantum states. The described package implements a number of functions for generating random states, which use Quantis QRNG as a source of randomness. It also provides procedures which can be used in simulations not related directly to quantum information processing. Program summaryProgram title: TRQS Catalogue identifier: AEKA_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEKA_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 7924 No. of bytes in distributed program, including test data, etc.: 88 651 Distribution format: tar.gz Programming language: Mathematica, C Computer: Requires a Quantis quantum random number generator (QRNG, http://www.idquantique.com/true-random-number-generator/products-overview.html) and supporting a recent version of Mathematica Operating system: Any platform supporting Mathematica; tested with GNU/Linux (32 and 64 bit) RAM: Case dependent Classification: 4.15 Nature of problem: Generation of random density matrices. Solution method: Use of a physical quantum random number generator. Running time: Generating 100 random numbers takes about 1 second, generating 1000 random density matrices takes more than a minute.

  2. Preparing Generation Z for the Teaching Profession

    ERIC Educational Resources Information Center

    Carter, Tim

    2018-01-01

    Generation Z, also known as the Homeland Generation, is the most recent generational cohort to enter the university setting. As with other generational cohorts, various shaping factors have impacted this group contributing to its unique and defining characteristics. When carefully considered, these characteristics may provide insight into how to…

  3. Absence of alsin function leads to corticospinal motor neuron vulnerability via novel disease mechanisms.

    PubMed

    Gautam, Mukesh; Jara, Javier H; Sekerkova, Gabriella; Yasvoina, Marina V; Martina, Marco; Özdinler, P Hande

    2016-03-15

    Mutations in the ALS2 gene result in early-onset amyotrophic lateral sclerosis, infantile-onset ascending hereditary spastic paraplegia and juvenile primary lateral sclerosis, suggesting prominent upper motor neuron involvement. However, the importance of alsin function for corticospinal motor neuron (CSMN) health and stability remains unknown. To date, four separate alsin knockout (Alsin(KO)) mouse models have been generated, and despite hopes of mimicking human pathology, none displayed profound motor function defects. This, however, does not rule out the possibility of neuronal defects within CSMN, which is not easy to detect in these mice. Detailed cellular analysis of CSMN has been hampered due to their limited numbers and the complex and heterogeneous structure of the cerebral cortex. In an effort to visualize CSMN in vivo and to investigate precise aspects of neuronal abnormalities in the absence of alsin function, we generated Alsin(KO)-UeGFP mice, by crossing Alsin(KO) and UCHL1-eGFP mice, a CSMN reporter line. We find that CSMN display vacuolated apical dendrites with increased autophagy, shrinkage of soma size and axonal pathology even in the pons region. Immunocytochemistry coupled with electron microscopy reveal that alsin is important for maintaining cellular cytoarchitecture and integrity of cellular organelles. In its absence, CSMN displays selective defects both in mitochondria and Golgi apparatus. UCHL1-eGFP mice help understand the underlying cellular factors that lead to CSMN vulnerability in diseases, and our findings reveal unique importance of alsin function for CSMN health and stability. © The Author 2016. Published by Oxford University Press.

  4. Sexual Dimorphism in the Alterations of Cardiac Muscle Mitochondrial Bioenergetics Associated to the Ageing Process.

    PubMed

    Colom, Bartomeu; Oliver, Jordi; Garcia-Palmer, Francisco J

    2015-11-01

    The incidence of cardiac disease is age and sex dependent, but the mechanisms governing these associations remain poorly understood. Mitochondria are the organelles in charge of producing energy for the cells, and their malfunction has been linked to cardiovascular disease and heart failure. Interestingly, heart mitochondrial content and functionality are also age and sex dependent. Here we investigated the combinatory effects of age and sex in mitochondrial bioenergetics that could help to understand their role on cardiac disease. Cardiac mitochondria from 6- and 24-month-old male and female Wistar rats were isolated, and the enzymatic activities of the oxidative-phosphorylative complexes I, III, and IV and ATPase, as well as the protein levels of complex IV, β-ATPase, and mitochondrial transcription factor A (TFAM), were measured. Furthermore, heart DNA content, citrate synthase activity, mitochondrial protein content, oxygen consumption, and H2O2 generation were also determined. Results showed a reduction in heart mitochondrial mass and functionality with age that correlated with increased H2O2 generation. Moreover, sex-dependent differences were found in several of these parameters. In particular, old females exhibited a significant loss of mitochondrial function and increased relative H2O2 production compared with their male counterparts. The results demonstrate a sex dimorphism in the age-associated defects on cardiac mitochondrial function. © The Author 2014. Published by Oxford University Press on behalf of The Gerontological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  5. A general reconstruction of the recent expansion history of the universe

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Vitenti, S.D.P.; Penna-Lima, M., E-mail: dias@iap.fr, E-mail: pennal@apc.in2p3.fr

    Distance measurements are currently the most powerful tool to study the expansion history of the universe without specifying its matter content nor any theory of gravitation. Assuming only an isotropic, homogeneous and flat universe, in this work we introduce a model-independent method to reconstruct directly the deceleration function via a piecewise function. Including a penalty factor, we are able to vary continuously the complexity of the deceleration function from a linear case to an arbitrary (n+1)-knots spline interpolation. We carry out a Monte Carlo (MC) analysis to determine the best penalty factor, evaluating the bias-variance trade-off, given the uncertainties ofmore » the SDSS-II and SNLS supernova combined sample (JLA), compilations of baryon acoustic oscillation (BAO) and H(z) data. The bias-variance analysis is done for three fiducial models with different features in the deceleration curve. We perform the MC analysis generating mock catalogs and computing their best-fit. For each fiducial model, we test different reconstructions using, in each case, more than 10{sup 4} catalogs in a total of about 5× 10{sup 5}. This investigation proved to be essential in determining the best reconstruction to study these data. We show that, evaluating a single fiducial model, the conclusions about the bias-variance ratio are misleading. We determine the reconstruction method in which the bias represents at most 10% of the total uncertainty. In all statistical analyses, we fit the coefficients of the deceleration function along with four nuisance parameters of the supernova astrophysical model. For the full sample, we also fit H{sub 0} and the sound horizon r{sub s}(z{sub d}) at the drag redshift. The bias-variance trade-off analysis shows that, apart from the deceleration function, all other estimators are unbiased. Finally, we apply the Ensemble Sampler Markov Chain Monte Carlo (ESMCMC) method to explore the posterior of the deceleration function up to redshift 1.3 (using only JLA) and 2.3 (JLA+BAO+H(z)). We obtain that the standard cosmological model agrees within 3σ level with the reconstructed results in the whole studied redshift intervals. Since our method is calibrated to minimize the bias, the error bars of the reconstructed functions are a good approximation for the total uncertainty.« less

  6. Grandparents University: Wisconsin Program Unites Generations

    ERIC Educational Resources Information Center

    Geyer, Bonnie Hutchins; Brintnall-Peterson, Mary; Schutt, Sarah

    2004-01-01

    "Grandparents University", a program planned and sponsored collaboratively by the University of Wisconsin--Extension Cooperative Extension Family Living Programs and the Wisconsin Alumni Association, was designed to enhance the relationship that exists between the grandparent and grandchild. In July of each year, grandchildren between…

  7. Sustainable Chemistry at Sungkyunkwan University.

    PubMed

    Park, Nam-Gyu

    2015-07-20

    Special Issue: Sustainable Chemistry at Sungkyunkwan University. Sustainable chemistry is key to the development of efficient renewable energies, which will become more and more important in order to combat global warming. In this Editorial, guest editor Prof. Nam-Gyu Park describes the context of this Special Issue on top-quality research towards sustainability performed at Sungkyunkwan University (SKKU) in Korea. Scientists at SKKU work on, for example, photovoltaic solar cells to generate low-cost electricity, lithium batteries and capacitors to store electricity, piezoelectric nanogenerators, thermoelectric devices, hydrogen generation, and fuel cells. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  8. Generating short-term probabilistic wind power scenarios via nonparametric forecast error density estimators: Generating short-term probabilistic wind power scenarios via nonparametric forecast error density estimators

    DOE PAGES

    Staid, Andrea; Watson, Jean -Paul; Wets, Roger J. -B.; ...

    2017-07-11

    Forecasts of available wind power are critical in key electric power systems operations planning problems, including economic dispatch and unit commitment. Such forecasts are necessarily uncertain, limiting the reliability and cost effectiveness of operations planning models based on a single deterministic or “point” forecast. A common approach to address this limitation involves the use of a number of probabilistic scenarios, each specifying a possible trajectory of wind power production, with associated probability. We present and analyze a novel method for generating probabilistic wind power scenarios, leveraging available historical information in the form of forecasted and corresponding observed wind power timemore » series. We estimate non-parametric forecast error densities, specifically using epi-spline basis functions, allowing us to capture the skewed and non-parametric nature of error densities observed in real-world data. We then describe a method to generate probabilistic scenarios from these basis functions that allows users to control for the degree to which extreme errors are captured.We compare the performance of our approach to the current state-of-the-art considering publicly available data associated with the Bonneville Power Administration, analyzing aggregate production of a number of wind farms over a large geographic region. Finally, we discuss the advantages of our approach in the context of specific power systems operations planning problems: stochastic unit commitment and economic dispatch. Here, our methodology is embodied in the joint Sandia – University of California Davis Prescient software package for assessing and analyzing stochastic operations strategies.« less

  9. Generating short-term probabilistic wind power scenarios via nonparametric forecast error density estimators: Generating short-term probabilistic wind power scenarios via nonparametric forecast error density estimators

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Staid, Andrea; Watson, Jean -Paul; Wets, Roger J. -B.

    Forecasts of available wind power are critical in key electric power systems operations planning problems, including economic dispatch and unit commitment. Such forecasts are necessarily uncertain, limiting the reliability and cost effectiveness of operations planning models based on a single deterministic or “point” forecast. A common approach to address this limitation involves the use of a number of probabilistic scenarios, each specifying a possible trajectory of wind power production, with associated probability. We present and analyze a novel method for generating probabilistic wind power scenarios, leveraging available historical information in the form of forecasted and corresponding observed wind power timemore » series. We estimate non-parametric forecast error densities, specifically using epi-spline basis functions, allowing us to capture the skewed and non-parametric nature of error densities observed in real-world data. We then describe a method to generate probabilistic scenarios from these basis functions that allows users to control for the degree to which extreme errors are captured.We compare the performance of our approach to the current state-of-the-art considering publicly available data associated with the Bonneville Power Administration, analyzing aggregate production of a number of wind farms over a large geographic region. Finally, we discuss the advantages of our approach in the context of specific power systems operations planning problems: stochastic unit commitment and economic dispatch. Here, our methodology is embodied in the joint Sandia – University of California Davis Prescient software package for assessing and analyzing stochastic operations strategies.« less

  10. Development of ICF Core Sets to standardize assessment of functioning and impairment in ADHD: the path ahead.

    PubMed

    Bölte, Sven; de Schipper, Elles; Holtmann, Martin; Karande, Sunil; de Vries, Petrus J; Selb, Melissa; Tannock, Rosemary

    2014-12-01

    In the study of health and quality of life in attention deficit/hyperactivity disorder (ADHD), it is of paramount importance to include assessment of functioning. The International Classification of Functioning, Disability and Health (ICF) provides a comprehensive, universally accepted framework for the description of functioning in relation to health conditions. In this paper, the authors outline the process to develop ICF Core Sets for ADHD. ICF Core Sets are subgroups of ICF categories selected to capture the aspects of functioning that are most likely to be affected in specific disorders. The ICF categories that will be included in the ICF Core Sets for ADHD will be determined at an ICF Core Set Consensus Conference, wherein evidence from four preliminary studies (a systematic review, an expert survey, a patient and caregiver qualitative study, and a clinical cross-sectional study) will be integrated. Comprehensive and Brief ICF Core Sets for ADHD will be developed with the goal of providing useful standards for research and clinical practice, and to generate a common language for the description of functioning in ADHD in different areas of life and across the lifespan.

  11. Structure and Function of the Bi-Directional Bacterial Flagellar Motor

    PubMed Central

    Morimoto, Yusuke V.; Minamino, Tohru

    2014-01-01

    The bacterial flagellum is a locomotive organelle that propels the bacterial cell body in liquid environments. The flagellum is a supramolecular complex composed of about 30 different proteins and consists of at least three parts: a rotary motor, a universal joint, and a helical filament. The flagellar motor of Escherichia coli and Salmonella enterica is powered by an inward-directed electrochemical potential difference of protons across the cytoplasmic membrane. The flagellar motor consists of a rotor made of FliF, FliG, FliM and FliN and a dozen stators consisting of MotA and MotB. FliG, FliM and FliN also act as a molecular switch, enabling the motor to spin in both counterclockwise and clockwise directions. Each stator is anchored to the peptidoglycan layer through the C-terminal periplasmic domain of MotB and acts as a proton channel to couple the proton flow through the channel with torque generation. Highly conserved charged residues at the rotor–stator interface are required not only for torque generation but also for stator assembly around the rotor. In this review, we will summarize our current understanding of the structure and function of the proton-driven bacterial flagellar motor. PMID:24970213

  12. Structure and function of the bi-directional bacterial flagellar motor.

    PubMed

    Morimoto, Yusuke V; Minamino, Tohru

    2014-02-18

    The bacterial flagellum is a locomotive organelle that propels the bacterial cell body in liquid environments. The flagellum is a supramolecular complex composed of about 30 different proteins and consists of at least three parts: a rotary motor, a universal joint, and a helical filament. The flagellar motor of Escherichia coli and Salmonella enterica is powered by an inward-directed electrochemical potential difference of protons across the cytoplasmic membrane. The flagellar motor consists of a rotor made of FliF, FliG, FliM and FliN and a dozen stators consisting of MotA and MotB. FliG, FliM and FliN also act as a molecular switch, enabling the motor to spin in both counterclockwise and clockwise directions. Each stator is anchored to the peptidoglycan layer through the C-terminal periplasmic domain of MotB and acts as a proton channel to couple the proton flow through the channel with torque generation. Highly conserved charged residues at the rotor-stator interface are required not only for torque generation but also for stator assembly around the rotor. In this review, we will summarize our current understanding of the structure and function of the proton-driven bacterial flagellar motor.

  13. Rational design of DNA sequences for nanotechnology, microarrays and molecular computers using Eulerian graphs.

    PubMed

    Pancoska, Petr; Moravek, Zdenek; Moll, Ute M

    2004-01-01

    Nucleic acids are molecules of choice for both established and emerging nanoscale technologies. These technologies benefit from large functional densities of 'DNA processing elements' that can be readily manufactured. To achieve the desired functionality, polynucleotide sequences are currently designed by a process that involves tedious and laborious filtering of potential candidates against a series of requirements and parameters. Here, we present a complete novel methodology for the rapid rational design of large sets of DNA sequences. This method allows for the direct implementation of very complex and detailed requirements for the generated sequences, thus avoiding 'brute force' filtering. At the same time, these sequences have narrow distributions of melting temperatures. The molecular part of the design process can be done without computer assistance, using an efficient 'human engineering' approach by drawing a single blueprint graph that represents all generated sequences. Moreover, the method eliminates the necessity for extensive thermodynamic calculations. Melting temperature can be calculated only once (or not at all). In addition, the isostability of the sequences is independent of the selection of a particular set of thermodynamic parameters. Applications are presented for DNA sequence designs for microarrays, universal microarray zip sequences and electron transfer experiments.

  14. Patenting Productivity and Intellectual Property Policies at Research I Universities: An Exploratory Comparative Study

    ERIC Educational Resources Information Center

    Mendoza, Pilar; Berger, Joseph B.

    2005-01-01

    In the 1980s, the US government encouraged the cooperation of industries with universities in order to bridge funding gaps and cope with global competitive markets through legislations that allow universities to start spin-off businesses and to generate profits from patents. At the turn of the century, university partnerships with the private…

  15. Shanghai Academic Ranking of World Universities (ARWU) and the "Big Five" South African Research Universities

    ERIC Educational Resources Information Center

    Boshoff, N.

    2009-01-01

    This article critically examines the methodology of the Shanghai Academic Ranking of World Universities (ARWU) by generating raw scores for the "big five" South African research universities (Stellenbosch, Cape Town, Kwazulu-Natal, Pretoria and the Witwatersrand, henceforth referred to as SU, UCT, UKZN, UP and WITS) using the ARWU…

  16. Corporate Universities: An Historical Perspective with an Analysis and Comparison of Development Models in the Literature and Practice

    ERIC Educational Resources Information Center

    Schmitt, Catherine A.

    2012-01-01

    This dissertation examines the history of workforce education, corporate university development models in both literature and practice, and the evolution of the next generation of corporate universities. It traces workforce education from indentured servants in Europe during the Middle Ages, to the sophisticated corporate universities that…

  17. [Clinical laboratory tests supporting respiratory disease treatment--chairman's introductory remarks].

    PubMed

    Takai, Daiya

    2014-12-01

    The symposium consisted of four parts: history of lung function tests, nitric oxide for diagnosis and monitoring of bronchial asthma, radiological and functional changes of the lung in COPD, and combined pulmonary fibrosis and emphysema (CPFE) occasionally showing almost normal results in lung function tests. The history of lung function tests was presented by Dr. Naoko Tojo of the Tokyo Medical and Dental University. Nitric oxide tests in clinical use for diagnosis and monitoring of bronchial asthma were presented by Dr. Hiroyuki Nagase of Teikyo University. Radiological and functional changes of the lung in COPD were presented by Dr. Shigeo Muro of Kyoto University. Clinical features of combined pulmonary fibrosis and emphysema and their associated lung function were presented by Dr. Daiya Takai of the University of Tokyo. I hope that discussing the history of lung function tests until the present was useful for many medical technologists. (Review).

  18. Geography and glocal scale - generational conversion/Geografia i skala glokalna - przemiana generacyjna

    NASA Astrophysics Data System (ADS)

    Pirveli, Marika; Lewczuk, Barbara

    2013-12-01

    The proposed text presents a conceptual change in the scope of some of the key concepts in the light of the two dictionaries (Britannica and Human Geography Dictionary) and Anglo-Saxon publications about the future of geography. Then, it combines the concept of references to the ongoing interdisciplinary studies included in the structure of the University of the Second and Third Generation. Applications built this way are of two types: (1) referring to a fundamental change in the process within the human perception of the environment for generations X and Y, and (2) referring to the process of glocalization, glocal scale and premises of the University of the Third Generation (3GU)

  19. Model-based software for simulating ultrasonic pulse/echo inspections of metal components

    NASA Astrophysics Data System (ADS)

    Chiou, Chien-Ping; Margetan, Frank J.; Taylor, Jared L.; McKillip, Matthew; Engle, Brady J.; Roberts, Ronald A.; Barnard, Daniel J.

    2017-02-01

    Under the sponsorship of the National Science Foundation's Industry/University Cooperative Research Center at Iowa State University, an effort was initiated in 2015 to repackage existing research-grade software into user friendly tools for the rapid estimation of signal-to-noise ratio (S/N) for ultrasonic inspections of metals. The software combines: (1) a Python-based graphical user interface for specifying an inspection scenario and displaying results; and (2) a Fortran-based engine for computing defect signals and backscattered grain noise characteristics. The later makes use the Thompson-Gray Model for the response from an internal defect and the Independent Scatterer Model for backscattered grain noise. This paper provides an overview of the ongoing modeling effort with emphasis on recent developments. These include: treatment of angle-beam inspections, implementation of distance-amplitude corrections, changes in the generation of "invented" calibration signals, efforts to simulate ultrasonic C-scans; and experimental testing of model predictions. The simulation software can now treat both normal and oblique-incidence immersion inspections of curved metal components having equiaxed microstructures in which the grain size varies with depth. Both longitudinal and shear-wave inspections are treated. The model transducer can either be planar, spherically-focused, or bi-cylindrically-focused. A calibration (or reference) signal is required and is used to deduce the measurement system efficiency function. This can be "invented" by the software using center frequency and bandwidth information specified by the user, or, alternatively, a measured calibration signal can be used. Defect types include flat-bottomed-hole reference reflectors, and spherical pores and inclusions. Simulation outputs include estimated defect signal amplitudes, root-mean-squared grain noise amplitudes, and S/N as functions of the depth of the defect within the metal component. At any particular depth, the user can view a simulated A-scan displaying the superimposed defect and grain-noise waveforms. The realistic grain noise signals used in the A-scans are generated from a set of measured "universal" noise signals whose strengths and spectral characteristics are altered to match predicted noise characteristics for the simulation at hand. We present simulation examples demonstrating recent developments, and discuss plans to improve simulator capabilities.

  20. Reinventing the Role of the University Researcher

    ERIC Educational Resources Information Center

    Nelson, Ingrid A.; London, Rebecca A.; Strobel, Karen R.

    2015-01-01

    This study examines the structuring of university-community research partnerships that facilitate theoretically grounded research while also generating findings that community partners find actionable. We analyze one partnership that positions university-based researchers as members of a team working to create, maintain, and use a longitudinal…

  1. Global expression for representing cohesive-energy curves. II

    NASA Technical Reports Server (NTRS)

    Schlosser, Herbert; Ferrante, John

    1993-01-01

    Schlosser et al. (1991) showed that the R dependence of the cohesive energy of partially ionic solids may be characterized by a two-term energy relationship consisting of a Coulomb term arising from the charge transfer, delta-Z, and a scaled universal energy function, E*(a *), which accounts for the partially covalent character of the bond and for repulsion between the atomic cores for small R; a* is a scaled length. In the paper by Schlosser et al., the normalized cohesive-energy curves of NaCl-structure alkali-halide crystals were generated with this expression. In this paper we generate the cohesive-energy curves of several families of partially ionic solids with different crystal structures and differing degrees of ionicity. These include the CsCl-structure Cs halides, and the Tl and Ag halides, which have weaker ionic bonding than the alkali halides, and which have the CsCl and NaCl structures, respectively. The cohesive-energy-curve parameters are then used to generate theoretical isothermal compression curves for the Li, Na, K, Cs, and Ag halides. We find good agreement with the available experimental compression data.

  2. Green Power Initiative

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Butler, Patrick Barry

    2013-01-28

    National energy policy supports the gathering of more detailed and authoritative data on the introduction of renewable bio-based fuels into new and existing district energy systems via the application of biomass gasification. The University of Iowa developed a biomass-fueled, university-scale steam generation system based on biomass gasification technologies. The system serves as a state-of-the-art research and educational facility in the emerging application of gasification in steam generation. The facility, which includes a smaller down-draft gasifier and a larger multi-stage biomass boiler, was designed to operate primarily on wood-based fuels, but has provisions for testing other biomass fuel sources produced withinmore » a 100-mile radius, providing enough flexibility to meet the fluctuating local supply of biomass from industry and Midwest agriculture. The equipment was installed in an existing, staffed facility. The down-draft gasifier unit is operated by College of Engineering staff and students, under the direct technical supervision of qualified Utilities plant staff. The Green Power Initiative also includes a substantial, innovative educational component. In addition to an onsite, graduate-level research program in biomass fuels, the investigators have integrated undergraduate and graduate level teaching – through classroom studies and experiential learning – and applied research into a biomass-based, university-scale, functioning power plant. University of Iowa is unique in that it currently has multiple renewable energy technologies deployed, including significant biomass combustion (oat hulls) at its Main Power Plant and a new reciprocating engine based renewable district energy system. This project complements and supports the national energy policy and State of Iowa initiatives in ethanol and biodiesel. Byproducts of ethanol and biodiesel processes (distiller grains) as well as industry residues (oat hulls, wood chips, construction and demolition waste), farm related material (seed corn and soybean seed), and poplar trees for cleaning up ground water are logical feed stocks for gasification.« less

  3. Comparing Current Students to a Pre-Millennial Generation: Are They Really Different?

    ERIC Educational Resources Information Center

    Yahr, Michael A.; Schimmel, Kurt

    2013-01-01

    The Millennial generation, also known as Generation Y, has garnered much attention in the print and broadcast media and at academic conferences because of the challenges that they pose to universities and corporations. Aggregate characteristics and preferences of the Millennial generation and of Generation X, their immediate predecessors, have…

  4. Welcome to the iGeneration!

    ERIC Educational Resources Information Center

    Rosen, Larry

    2010-01-01

    Defining and understanding a generation of Americans has always been difficult until years after the generation ends. Although there is universal agreement on the Baby Boomer generation (1946-1964) and most people agree that Generation X started in 1965 and ended around 1979, after that it gets murky. In his research, the author believes that the…

  5. Academic Characteristics among First-Generation and Non-First-Generation College Students

    ERIC Educational Resources Information Center

    Murphy, Catrina G.; Hicks, Terence

    2006-01-01

    The present study involved a sample (n = 203) of college students and investigated the differences in academic expectations of first-generation and non-first-generation undergraduates who attended a doctoral-granting public four-year historically Black university on the eastern shore of Maryland. There were 133 first-generation and 70…

  6. What Happened in Dialogical Classes of Intercultural Understanding?: An Analysis of Exchanging Classes between Chinese and Japanese University Students.

    PubMed

    Pian, Chengnan

    2017-09-01

    Chinese and Japanese university students make an exchanging of opinions regarding the topic "making a mobile phone call in the bus". Both sides of the communication can achieve different changes of cognition through different ways. This paper focuses on Chinese university students, and analyzes their cognition of the traffic etiquette in Japan and China. Unlike Japanese university students' change of cognition, Chinese university students have made more negative evaluation on Japanese traffic etiquette after the communication. However, this does not mean to shield their traffic etiquette. They have the two-way changes of cognition in both social etiquette and personal behavior. These changes may be related to the unbalanced dialogue relationship, as well as the generation of hot issues. How to generate the hot issues, and promote the two-way movement of understanding are the important clues for the design of communication curriculum to enhance the cultural understanding.

  7. Cosmic Origins Program Annual Technology Report

    NASA Technical Reports Server (NTRS)

    Pham, Bruce Thai; Neff, Susan Gale

    2015-01-01

    What is the Cosmic Origins (COR) Program? From ancient times, humans have looked up at the night sky and wondered: Are we alone? How did the universe come to be? How does the universe work? COR focuses on the second question. Scientists investigating this broad theme seek to understand the origin and evolution of the universe from the Big Bang to the present day, determining how the expanding universe grew into a grand cosmic web of dark matter enmeshed with galaxies and pristine gas, forming, merging, and evolving over time. COR also seeks to understand how stars and planets form from clouds in these galaxies to create the heavy elements that are essential to life starting with the first generation of stars to seed the universe, and continuing through the birth and eventual death of all subsequent generations of stars. The COR Programs purview includes the majority of the field known as astronomy, from antiquity to the present.

  8. Program Annual Technology Report: Cosmic Origins Program Office

    NASA Technical Reports Server (NTRS)

    Pham, Thai; Neff, Susan

    2017-01-01

    What is the Cosmic Origins (COR) Program? From ancient times, humans have looked up at the night sky and wondered: Are we alone? How did the universe come to be? How does the universe work? COR focuses on the second question. Scientists investigating this broad theme seek to understand the origin and evolution of the universe from the Big Bang to the present day, determining how the expanding universe grew into a grand cosmic web of dark matter enmeshed with galaxies and pristine gas, forming, merging, and evolving over time. COR also seeks to understand how stars and planets form from clouds in these galaxies to create the heavy elements that are essential to life, starting with the first generation of stars to seed the universe, and continuing through the birth and eventual death of all subsequent generations of stars. The COR Programs purview includes the majority of the field known as astronomy.

  9. What's that gene (or protein)? Online resources for exploring functions of genes, transcripts, and proteins

    PubMed Central

    Hutchins, James R. A.

    2014-01-01

    The genomic era has enabled research projects that use approaches including genome-scale screens, microarray analysis, next-generation sequencing, and mass spectrometry–based proteomics to discover genes and proteins involved in biological processes. Such methods generate data sets of gene, transcript, or protein hits that researchers wish to explore to understand their properties and functions and thus their possible roles in biological systems of interest. Recent years have seen a profusion of Internet-based resources to aid this process. This review takes the viewpoint of the curious biologist wishing to explore the properties of protein-coding genes and their products, identified using genome-based technologies. Ten key questions are asked about each hit, addressing functions, phenotypes, expression, evolutionary conservation, disease association, protein structure, interactors, posttranslational modifications, and inhibitors. Answers are provided by presenting the latest publicly available resources, together with methods for hit-specific and data set–wide information retrieval, suited to any genome-based analytical technique and experimental species. The utility of these resources is demonstrated for 20 factors regulating cell proliferation. Results obtained using some of these are discussed in more depth using the p53 tumor suppressor as an example. This flexible and universally applicable approach for characterizing experimental hits helps researchers to maximize the potential of their projects for biological discovery. PMID:24723265

  10. Trypanosome RNA Editing Mediator Complex proteins have distinct functions in gRNA utilization.

    PubMed

    Simpson, Rachel M; Bruno, Andrew E; Chen, Runpu; Lott, Kaylen; Tylec, Brianna L; Bard, Jonathan E; Sun, Yijun; Buck, Michael J; Read, Laurie K

    2017-07-27

    Uridine insertion/deletion RNA editing is an essential process in kinetoplastid parasites whereby mitochondrial mRNAs are modified through the specific insertion and deletion of uridines to generate functional open reading frames, many of which encode components of the mitochondrial respiratory chain. The roles of numerous non-enzymatic editing factors have remained opaque given the limitations of conventional methods to interrogate the order and mechanism by which editing progresses and thus roles of individual proteins. Here, we examined whole populations of partially edited sequences using high throughput sequencing and a novel bioinformatic platform, the Trypanosome RNA Editing Alignment Tool (TREAT), to elucidate the roles of three proteins in the RNA Editing Mediator Complex (REMC). We determined that the factors examined function in the progression of editing through a gRNA; however, they have distinct roles and REMC is likely heterogeneous in composition. We provide the first evidence that editing can proceed through numerous paths within a single gRNA and that non-linear modifications are essential, generating commonly observed junction regions. Our data support a model in which RNA editing is executed via multiple paths that necessitate successive re-modification of junction regions facilitated, in part, by the REMC variant containing TbRGG2 and MRB8180. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

  11. Multiple D3-Instantons and Mock Modular Forms I

    NASA Astrophysics Data System (ADS)

    Alexandrov, Sergei; Banerjee, Sibasish; Manschot, Jan; Pioline, Boris

    2017-07-01

    We study D3-instanton corrections to the hypermultiplet moduli space in type IIB string theory compactified on a Calabi-Yau threefold. In a previous work, consistency of D3-instantons with S-duality was established at first order in the instanton expansion, using the modular properties of the M5-brane elliptic genus. We extend this analysis to the two-instanton level, where wall-crossing phenomena start playing a role. We focus on the contact potential, an analogue of the Kähler potential which must transform as a modular form under S-duality. We show that it can be expressed in terms of a suitable modification of the partition function of D4-D2-D0 BPS black holes, constructed out of the generating function of MSW invariants (the latter coincide with Donaldson-Thomas invariants in a particular chamber). Modular invariance of the contact potential then requires that, in the case where the D3-brane wraps a reducible divisor, the generating function of MSW invariants must transform as a vector-valued mock modular form, with a specific modular completion built from the MSW invariants of the constituents. Physically, this gives a powerful constraint on the degeneracies of BPS black holes. Mathematically, our result gives a universal prediction for the modular properties of Donaldson-Thomas invariants of pure two-dimensional sheaves.

  12. Detection of smoothly distributed spatial outliers, with applications to identifying the distribution of parenchymal hyperinflation following an airway challenge in asthmatics.

    PubMed

    Thurman, Andrew L; Choi, Jiwoong; Choi, Sanghun; Lin, Ching-Long; Hoffman, Eric A; Lee, Chang Hyun; Chan, Kung-Sik

    2017-05-10

    Methacholine challenge tests are used to measure changes in pulmonary function that indicate symptoms of asthma. In addition to pulmonary function tests, which measure global changes in pulmonary function, computed tomography images taken at full inspiration before and after administration of methacholine provide local air volume changes (hyper-inflation post methacholine) at individual acinar units, indicating local airway hyperresponsiveness. Some of the acini may have extreme air volume changes relative to the global average, indicating hyperresponsiveness, and those extreme values may occur in clusters. We propose a Gaussian mixture model with a spatial smoothness penalty to improve prediction of hyperresponsive locations that occur in spatial clusters. A simulation study provides evidence that the spatial smoothness penalty improves prediction under different data-generating mechanisms. We apply this method to computed tomography data from Seoul National University Hospital on five healthy and ten asthmatic subjects. Copyright © 2017 John Wiley & Sons, Ltd. Copyright © 2017 John Wiley & Sons, Ltd.

  13. Nano-inspired fluidic interactivity for boiling heat transfer: impact and criteria

    PubMed Central

    Kim, Beom Seok; Choi, Geehong; Shin, Sangwoo; Gemming, Thomas; Cho, Hyung Hee

    2016-01-01

    The enhancement of boiling heat transfer, the most powerful energy-transferring technology, will lead to milestones in the development of high-efficiency, next-generation energy systems. Perceiving nano-inspired interface functionalities from their rough morphologies, we demonstrate interface-induced liquid refreshing is essential to improve heat transfer by intrinsically avoiding Leidenfrost phenomenon. High liquid accessibility of hemi-wicking and catalytic nucleation, triggered by the morphological and hydrodynamic peculiarities of nano-inspired interfaces, contribute to the critical heat flux (CHF) and the heat transfer coefficient (HTC). Our experiments show CHF is a function of universal hydrodynamic characteristics involving interfacial liquid accessibility and HTC is improved with a higher probability of smaller nuclei with less superheat. Considering the interface-induced and bulk liquid accessibility at boiling, we discuss functionalizing the interactivity between an interface and a counteracting fluid seeking to create a novel interface, a so-called smart interface, for a breakthrough in boiling and its pragmatic application in energy systems. PMID:27708341

  14. Air shower simulation for WASAVIES: warning system for aviation exposure to solar energetic particles.

    PubMed

    Sato, T; Kataoka, R; Yasuda, H; Yashiro, S; Kuwabara, T; Shiota, D; Kubo, Y

    2014-10-01

    WASAVIES, a warning system for aviation exposure to solar energetic particles (SEPs), is under development by collaboration between several institutes in Japan and the USA. It is designed to deterministically forecast the SEP fluxes incident on the atmosphere within 6 h after flare onset using the latest space weather research. To immediately estimate the aircrew doses from the obtained SEP fluxes, the response functions of the particle fluxes generated by the incidence of monoenergetic protons into the atmosphere were developed by performing air shower simulations using the Particle and Heavy Ion Transport code system. The accuracy of the simulation was well verified by calculating the increase count rates of a neutron monitor during a ground-level enhancement, combining the response function with the SEP fluxes measured by the PAMELA spectrometer. The response function will be implemented in WASAVIES and used to protect aircrews from additional SEP exposure. © The Author 2013. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  15. Parsing the Role of the Hippocampus in Approach-Avoidance Conflict.

    PubMed

    Loh, Eleanor; Kurth-Nelson, Zeb; Berron, David; Dayan, Peter; Duzel, Emrah; Dolan, Ray; Guitart-Masip, Marc

    2017-01-01

    The hippocampus plays a central role in the approach-avoidance conflict that is central to the genesis of anxiety. However, its exact functional contribution has yet to be identified. We designed a novel gambling task that generated approach-avoidance conflict while controlling for spatial processing. We fit subjects' behavior using a model that quantified the subjective values of choice options, and recorded neural signals using functional magnetic resonance imaging (fMRI). Distinct functional signals were observed in anterior hippocampus, with inferior hippocampus selectively recruited when subjects rejected a gamble, to a degree that covaried with individual differences in anxiety. The superior anterior hippocampus, in contrast, uniquely demonstrated value signals that were potentiated in the context of approach-avoidance conflict. These results implicate the anterior hippocampus in behavioral avoidance and choice monitoring, in a manner relevant to understanding its role in anxiety. Our findings highlight interactions between subregions of the hippocampus as an important focus for future study. © The Author 2016. Published by Oxford University Press.

  16. Characterizing visible and invisible cell wall mutant phenotypes.

    PubMed

    Carpita, Nicholas C; McCann, Maureen C

    2015-07-01

    About 10% of a plant's genome is devoted to generating the protein machinery to synthesize, remodel, and deconstruct the cell wall. High-throughput genome sequencing technologies have enabled a reasonably complete inventory of wall-related genes that can be assembled into families of common evolutionary origin. Assigning function to each gene family member has been aided immensely by identification of mutants with visible phenotypes or by chemical and spectroscopic analysis of mutants with 'invisible' phenotypes of modified cell wall composition and architecture that do not otherwise affect plant growth or development. This review connects the inference of gene function on the basis of deviation from the wild type in genetic functional analyses to insights provided by modern analytical techniques that have brought us ever closer to elucidating the sequence structures of the major polysaccharide components of the plant cell wall. © The Author 2015. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  17. GenCLiP 2.0: a web server for functional clustering of genes and construction of molecular networks based on free terms.

    PubMed

    Wang, Jia-Hong; Zhao, Ling-Feng; Lin, Pei; Su, Xiao-Rong; Chen, Shi-Jun; Huang, Li-Qiang; Wang, Hua-Feng; Zhang, Hai; Hu, Zhen-Fu; Yao, Kai-Tai; Huang, Zhong-Xi

    2014-09-01

    Identifying biological functions and molecular networks in a gene list and how the genes may relate to various topics is of considerable value to biomedical researchers. Here, we present a web-based text-mining server, GenCLiP 2.0, which can analyze human genes with enriched keywords and molecular interactions. Compared with other similar tools, GenCLiP 2.0 offers two unique features: (i) analysis of gene functions with free terms (i.e. any terms in the literature) generated by literature mining or provided by the user and (ii) accurate identification and integration of comprehensive molecular interactions from Medline abstracts, to construct molecular networks and subnetworks related to the free terms. http://ci.smu.edu.cn. Supplementary data are available at Bioinformatics online. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  18. HPG operating experience at CEM-UT

    NASA Astrophysics Data System (ADS)

    Gully, J. H.; Aanstoos, T. A.; Nalty, K.; Walls, W. A.

    1986-11-01

    Design and functional features are presented for three homopolar generators (HPG) used in experiments during the last decade at the Center for Electromechanics at the University of Texas. The first, a disk-type, 10 MJ HPG, was built in 1973 as a prototype power source for fusion experiments. A second, compact HPG was built in 1980 for opening switch experiments as part of railgun research. The third device is an iron-core, full-scale, high speed bearing and brush test facility for supplying an energy density of 60 MJ/cu m. Engineering data obtained during studies of armature reactions actively cooled brushes morganite-copper graphite rim brushes, and peak currents, are summarized.

  19. Universal features of fluctuations in globular proteins.

    PubMed

    Erman, Burak

    2016-06-01

    Using data from 2000 non-homologous protein crystal structures, we show that the distribution of residue B factors of proteins collapses onto a single master curve. We show by maximum entropy arguments that this curve is a Gamma function whose order and dispersion are obtained from experimental data. The distribution for any given specific protein can be generated from the master curve by a linear transformation. Any perturbation of the B factor distribution of a protein, imposed at constant energy, causes a decrease in the entropy of the protein relative to that of the reference state. Proteins 2016; 84:721-725. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  20. Forbidden regimes in the distribution of bipartite quantum correlations due to multiparty entanglement

    NASA Astrophysics Data System (ADS)

    Kumar, Asutosh; Dhar, Himadri Shekhar; Prabhu, R.; Sen(De), Aditi; Sen, Ujjwal

    2017-05-01

    Monogamy is a nonclassical property that limits the distribution of quantum correlation among subparts of a multiparty system. We show that monogamy scores for different quantum correlation measures are bounded above by functions of genuine multipartite entanglement for a large majority of pure multiqubit states. The bound is universal for all three-qubit pure states. We derive necessary conditions to characterize the states that violate the bound, which can also be observed by numerical simulation for a small set of states, generated Haar uniformly. The results indicate that genuine multipartite entanglement restricts the distribution of bipartite quantum correlations in a multiparty system.

  1. Mentoring as a Predictor of Student Success among First-Generation and Continuing-Generation Students Enrolled in a Public Four-Year University

    ERIC Educational Resources Information Center

    Sparks, Lisa Okada

    2017-01-01

    The purpose of this study was to identify which aspects of mentoring contribute to intent to graduate, college GPA, and levels of thriving in a sample of 416 juniors and seniors at a public university in Southern California. A secondary interest was to determine the extent to which the contribution of the mentoring components to the variation in…

  2. A Survey on Language Use, Attitudes, and Identity in Relation to Philippine English among Young Generation Filipinos: An Initial Sample from a Private University

    ERIC Educational Resources Information Center

    Borlongan, Ariane Macalinga

    2009-01-01

    This study looks at the language use, attitudes, and identity in relation to Philippine English among young generation Filipinos through a questionnaire survey of a selected group of students from a Philippine private university. The survey findings would reveal that most domains of use and verbal activities are dominated by English as the…

  3. First-Generation College Students and Undergraduate Research: Narrative Inquiry into the University of Arizona's Ronald E. McNair Achievement Program and the Phenomenon of Student Transformation

    ERIC Educational Resources Information Center

    Huerta, Andrew L.

    2013-01-01

    With increasing numbers of first-generation college students enrolling in colleges and universities across the US, so too is the need to begin preparing such underrepresented students for graduate school and a career in academia. As a phenomenological case study of student transformation, this dissertation examines the experience of nine…

  4. The universal function in color dipole model

    NASA Astrophysics Data System (ADS)

    Jalilian, Z.; Boroun, G. R.

    2017-10-01

    In this work we review color dipole model and recall properties of the saturation and geometrical scaling in this model. Our primary aim is determining the exact universal function in terms of the introduced scaling variable in different distance than the saturation radius. With inserting the mass in calculation we compute numerically the contribution of heavy productions in small x from the total structure function by the fraction of universal functions and show the geometrical scaling is established due to our scaling variable in this study.

  5. On the habitability of universes without stable deuterium

    NASA Astrophysics Data System (ADS)

    Adams, Fred C.; Grohs, Evan

    2017-05-01

    In both stars and in the early universe, the production of deuterium is the first step on the way to producing heavier nuclei. If the strong force were slightly weaker, then deuterium would not be stable, and many authors have noted that nuclesynthesis would be compromised so that helium production could not proceed through standard reaction chains. Motivated by the possibility that other regions of space-time could have different values for the fundamental constants, this paper considers stellar evolution in universes without stable deuterium and argues that such universes can remain habitable. Even in universes with no stellar nucleosynthesis, stars can form and will generate energy through gravitational contraction. Using both analytic estimates and a state-of-the-art stellar evolution code, we show that such stars can be sufficiently luminous and long-lived to support life. Stars with initial masses that exceed the Chandrasekhar mass cannot be supported by degeneracy pressure and will explode at the end of their contraction phase. The resulting explosive nucleosynthesis can thus provide the universe with some heavy elements. We also explore the possibility that helium can be produced in stellar cores through a triple-nucleon reaction that is roughly analogous to the triple-alpha reaction that operates in our universe. Stars burning hydrogen through this process are somewhat hotter than those in our universe, but otherwise play the same role. Next we show that with even trace amounts (metallicity Z ∼10-10) of heavy elements - produced through the triple-nucleon process or by explosive nucleosynthesis - the CNO cycle can operate and allow stars to function. Finally, we consider Big Bang Nucleosynthesis without stable deuterium and find that only trace amounts of helium are produced, with even smaller abundances of other nuclei. With stars evolving through gravitational contraction, explosive nucleosynthesis, the triple-nucleon reaction, and the CNO cycle, universes with no stable deuterium are thus potentially habitable, contrary to many previous claims.

  6. Ultra-low input transcriptomics reveal the spore functional content and phylogenetic affiliations of poorly studied arbuscular mycorrhizal fungi.

    PubMed

    Beaudet, Denis; Chen, Eric C H; Mathieu, Stephanie; Yildirir, Gokalp; Ndikumana, Steve; Dalpé, Yolande; Séguin, Sylvie; Farinelli, Laurent; Stajich, Jason E; Corradi, Nicolas

    2017-12-02

    Arbuscular mycorrhizal fungi (AMF) are a group of soil microorganisms that establish symbioses with the vast majority of land plants. To date, generation of AMF coding information has been limited to model genera that grow well axenically; Rhizoglomus and Gigaspora. Meanwhile, data on the functional gene repertoire of most AMF families is non-existent. Here, we provide primary large-scale transcriptome data from eight poorly studied AMF species (Acaulospora morrowiae, Diversispora versiforme, Scutellospora calospora, Racocetra castanea, Paraglomus brasilianum, Ambispora leptoticha, Claroideoglomus claroideum and Funneliformis mosseae) using ultra-low input ribonucleic acid (RNA)-seq approaches. Our analyses reveals that quiescent spores of many AMF species harbour a diverse functional diversity and solidify known evolutionary relationships within the group. Our findings demonstrate that RNA-seq data obtained from low-input RNA are reliable in comparison to conventional RNA-seq experiments. Thus, our methodology can potentially be used to deepen our understanding of fungal microbial function and phylogeny using minute amounts of RNA material. © The Author 2017. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

  7. Measuring effectiveness of a university by a parallel network DEA model

    NASA Astrophysics Data System (ADS)

    Kashim, Rosmaini; Kasim, Maznah Mat; Rahman, Rosshairy Abd

    2017-11-01

    Universities contribute significantly to the development of human capital and socio-economic improvement of a country. Due to that, Malaysian universities carried out various initiatives to improve their performance. Most studies have used the Data Envelopment Analysis (DEA) model to measure efficiency rather than effectiveness, even though, the measurement of effectiveness is important to realize how effective a university in achieving its ultimate goals. A university system has two major functions, namely teaching and research and every function has different resources based on its emphasis. Therefore, a university is actually structured as a parallel production system with its overall effectiveness is the aggregated effectiveness of teaching and research. Hence, this paper is proposing a parallel network DEA model to measure the effectiveness of a university. This model includes internal operations of both teaching and research functions into account in computing the effectiveness of a university system. In literature, the graduate and the number of program offered are defined as the outputs, then, the employed graduates and the numbers of programs accredited from professional bodies are considered as the outcomes for measuring the teaching effectiveness. Amount of grants is regarded as the output of research, while the different quality of publications considered as the outcomes of research. A system is considered effective if only all functions are effective. This model has been tested using a hypothetical set of data consisting of 14 faculties at a public university in Malaysia. The results show that none of the faculties is relatively effective for the overall performance. Three faculties are effective in teaching and two faculties are effective in research. The potential applications of the parallel network DEA model allow the top management of a university to identify weaknesses in any functions in their universities and take rational steps for improvement.

  8. 40 CFR 262.100 - To what organizations does this subpart apply?

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...: (a) It is one of the three following academic institutions: The University of Massachusetts Boston in... Burlington, Vermont (“Universities”); and (b) It is a laboratory at one of the Universities (identified... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University...

  9. 40 CFR 262.100 - To what organizations does this subpart apply?

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ...: (a) It is one of the three following academic institutions: The University of Massachusetts Boston in... Burlington, Vermont (“Universities”); and (b) It is a laboratory at one of the Universities (identified... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University...

  10. 40 CFR 262.100 - To what organizations does this subpart apply?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...: (a) It is one of the three following academic institutions: The University of Massachusetts Boston in... Burlington, Vermont (“Universities”); and (b) It is a laboratory at one of the Universities (identified... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University...

  11. 40 CFR 262.106 - When must a hazardous waste determination be made?

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... this point each University must determine whether the laboratory waste will be reused or whether it... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University... accumulation area, each University must evaluate the laboratory wastes to determine whether they are solid...

  12. 40 CFR 262.102 - What special definitions are included in this subpart?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University... particularly hazardous substances as designated in a University's Chemical Hygiene Plan under OSHA, or... Management Plan (EMP) means a written program developed and implemented by the university which sets forth...

  13. 40 CFR 262.100 - To what organizations does this subpart apply?

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...: (a) It is one of the three following academic institutions: The University of Massachusetts Boston in... Burlington, Vermont (“Universities”); and (b) It is a laboratory at one of the Universities (identified... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University...

  14. 40 CFR 262.106 - When must a hazardous waste determination be made?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... this point each University must determine whether the laboratory waste will be reused or whether it... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University... accumulation area, each University must evaluate the laboratory wastes to determine whether they are solid...

  15. 40 CFR 262.100 - To what organizations does this subpart apply?

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...: (a) It is one of the three following academic institutions: The University of Massachusetts Boston in... Burlington, Vermont (“Universities”); and (b) It is a laboratory at one of the Universities (identified... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University...

  16. 40 CFR 262.106 - When must a hazardous waste determination be made?

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... this point each University must determine whether the laboratory waste will be reused or whether it... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University... accumulation area, each University must evaluate the laboratory wastes to determine whether they are solid...

  17. 40 CFR 262.106 - When must a hazardous waste determination be made?

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... this point each University must determine whether the laboratory waste will be reused or whether it... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University... accumulation area, each University must evaluate the laboratory wastes to determine whether they are solid...

  18. 40 CFR 262.106 - When must a hazardous waste determination be made?

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... this point each University must determine whether the laboratory waste will be reused or whether it... (CONTINUED) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University... accumulation area, each University must evaluate the laboratory wastes to determine whether they are solid...

  19. 40 CFR 262.104 - What are the minimum performance criteria?

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University Laboratories... criteria? The Minimum Performance Criteria that each University must meet in managing its Laboratory Waste are: (a) Each University must label all laboratory waste with the general hazard class and either the...

  20. 40 CFR 262.104 - What are the minimum performance criteria?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University Laboratories... criteria? The Minimum Performance Criteria that each University must meet in managing its Laboratory Waste are: (a) Each University must label all laboratory waste with the general hazard class and either the...

  1. 40 CFR 262.104 - What are the minimum performance criteria?

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...) SOLID WASTES (CONTINUED) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE University Laboratories... criteria? The Minimum Performance Criteria that each University must meet in managing its Laboratory Waste are: (a) Each University must label all laboratory waste with the general hazard class and either the...

  2. Revenue Sharing: An Assessment of Current Policies at UK Universities

    ERIC Educational Resources Information Center

    Gazzard, James; Brown, Sarah A.

    2012-01-01

    The transfer of academic technologies to industry is an important process underpinning innovation and economic development. Various approaches have been adopted by universities to encourage academics to participate in commercial activities. Many have implemented revenue sharing policies, through which the revenues generated from university-owned…

  3. The Metropolitan University: A Joint Venture.

    ERIC Educational Resources Information Center

    O'Brien, Gregory M. St. L.

    1997-01-01

    Capital fund-raising campaigns of metropolitan universities must be based on relationships that can generate resources to position the institution in the community. At the University of New Orleans (Louisiana), a successful capital campaign resulted in a welcome increase in external gift resources to support endowed professorships, centers of…

  4. Building ICT4D Capacity in and by African Universities

    ERIC Educational Resources Information Center

    Colle, R. D.

    2005-01-01

    Universities and community telecenters have somewhat parallel missions in society. These include the generation, storage and diffusion of knowledge and information. Yet, in most developing countries where telecenters strive to be demand-driven, universities are seldom perceived as relevant to telecenters sustainability. Focusing especially on…

  5. Understanding University Technology Transfer

    ERIC Educational Resources Information Center

    Association of American Universities, 2011

    2011-01-01

    Federal government agencies provide about $33 billion a year to universities to conduct scientific research. That continuing investment expands human knowledge and helps educate the next generation of science and technology leaders. New discoveries from university research also form the basis for many new products and processes that benefit the…

  6. The Vanishing Neighborhood Campus

    ERIC Educational Resources Information Center

    Halfond, Jay A.

    2012-01-01

    Only a generation ago, universities like Northeastern and Boston University had campuses strategically sprinkled throughout eastern Massachusetts. Lesley University offered graduate education programs across the U.S. BU had a contract with the U.S. Army to deliver master's programs on military bases throughout Europe. Mega-high-tech companies,…

  7. An Alien Presence: The Long, Sad History of Correspondence Study at the University of Chicago

    ERIC Educational Resources Information Center

    Pittman, Von

    2008-01-01

    University of Chicago founding president William Rainey Harper believed that correspondence study should be an integral part of the great university he founded. Universities should not only discover and generate new knowledge. They also should disseminate it, he believed. Thereby, they could advance one of the chief progressive causes of the day,…

  8. Spinor Field Nonlinearity and Space-Time Geometry

    NASA Astrophysics Data System (ADS)

    Saha, Bijan

    2018-03-01

    Within the scope of Bianchi type VI,VI0,V, III, I, LRSBI and FRW cosmological models we have studied the role of nonlinear spinor field on the evolution of the Universe and the spinor field itself. It was found that due to the presence of non-trivial non-diagonal components of the energy-momentum tensor of the spinor field in the anisotropic space-time, there occur some severe restrictions both on the metric functions and on the components of the spinor field. In this report we have considered a polynomial nonlinearity which is a function of invariants constructed from the bilinear spinor forms. It is found that in case of a Bianchi type-VI space-time, depending of the sign of self-coupling constants, the model allows either late time acceleration or oscillatory mode of evolution. In case of a Bianchi VI 0 type space-time due to the specific behavior of the spinor field we have two different scenarios. In one case the invariants constructed from bilinear spinor forms become trivial, thus giving rise to a massless and linear spinor field Lagrangian. This case is equivalent to the vacuum solution of the Bianchi VI 0 type space-time. The second case allows non-vanishing massive and nonlinear terms and depending on the sign of coupling constants gives rise to accelerating mode of expansion or the one that after obtaining some maximum value contracts and ends in big crunch, consequently generating space-time singularity. In case of a Bianchi type-V model there occur two possibilities. In one case we found that the metric functions are similar to each other. In this case the Universe expands with acceleration if the self-coupling constant is taken to be a positive one, whereas a negative coupling constant gives rise to a cyclic or periodic solution. In the second case the spinor mass and the spinor field nonlinearity vanish and the Universe expands linearly in time. In case of a Bianchi type-III model the space-time remains locally rotationally symmetric all the time, though the isotropy of space-time can be attained for a large proportionality constant. As far as evolution is concerned, depending on the sign of coupling constant the model allows both accelerated and oscillatory mode of expansion. A negative coupling constant leads to an oscillatory mode of expansion, whereas a positive coupling constant generates expanding Universe with late time acceleration. Both deceleration parameter and EoS parameter in this case vary with time and are in agreement with modern concept of space-time evolution. In case of a Bianchi type-I space-time the non-diagonal components lead to three different possibilities. In case of a full BI space-time we find that the spinor field nonlinearity and the massive term vanish, hence the spinor field Lagrangian becomes massless and linear. In two other cases the space-time evolves into either LRSBI or FRW Universe. If we consider a locally rotationally symmetric BI( LRSBI) model, neither the mass term nor the spinor field nonlinearity vanishes. In this case depending on the sign of coupling constant we have either late time accelerated mode of expansion or oscillatory mode of evolution. In this case for an expanding Universe we have asymptotical isotropization. Finally, in case of a FRW model neither the mass term nor the spinor field nonlinearity vanishes. Like in LRSBI case we have either late time acceleration or cyclic mode of evolution. These findings allow us to conclude that the spinor field is very sensitive to the gravitational one.

  9. Universal Influenza B Virus Genomic Amplification Facilitates Sequencing, Diagnostics, and Reverse Genetics

    PubMed Central

    Zhou, Bin; Lin, Xudong; Wang, Wei; Halpin, Rebecca A.; Bera, Jayati; Stockwell, Timothy B.; Barr, Ian G.

    2014-01-01

    Although human influenza B virus (IBV) is a significant human pathogen, its great genetic diversity has limited our ability to universally amplify the entire genome for subsequent sequencing or vaccine production. The generation of sequence data via next-generation approaches and the rapid cloning of viral genes are critical for basic research, diagnostics, antiviral drugs, and vaccines to combat IBV. To overcome the difficulty of amplifying the diverse and ever-changing IBV genome, we developed and optimized techniques that amplify the complete segmented negative-sense RNA genome from any IBV strain in a single tube/well (IBV genomic amplification [IBV-GA]). Amplicons for >1,000 diverse IBV genomes from different sample types (e.g., clinical specimens) were generated and sequenced using this robust technology. These approaches are sensitive, robust, and sequence independent (i.e., universally amplify past, present, and future IBVs), which facilitates next-generation sequencing and advanced genomic diagnostics. Importantly, special terminal sequences engineered into the optimized IBV-GA2 products also enable ligation-free cloning to rapidly generate reverse-genetics plasmids, which can be used for the rescue of recombinant viruses and/or the creation of vaccine seed stock. PMID:24501036

  10. Are We There Yet? Exploring the Impact of Translating Cognitive Tests for Dementia Using Mobile Technology in an Aging Population.

    PubMed

    Ruggeri, Kai; Maguire, Áine; Andrews, Jack L; Martin, Eric; Menon, Shantanu

    2016-01-01

    This study examines implications of the expanded use of mobile platforms in testing cognitive function, and generates evidence on the impact utilizing mobile platforms for dementia screen. The Saint Louis University Mental State examination (SLUMS) was ported onto a computerized mobile application named the Cambridge University Pen to Digital Equivalence assessment (CUPDE). CUPDE was piloted and compared to the traditional pen and paper version, with a common comparator test for both groups. Sixty healthy participants (aged 50-79) completed both measurements. Differences were tested between overall outcomes, individual items, and relationship with the comparator. Significant differences in the overall scores between the two testing versions as well as within individual items were observed. Even when groups were matched by cognitive function and age, scores on SLUMS original version (M = 19.75, SD = 3) were significantly higher than those on CUPDE (M = 15.88, SD = 3.5), t (15) = 3.02, p < 0.01. Mobile platforms require the development of new normative standards, even when items can be directly translated. Furthermore, these must fit aging populations with significant variance in familiarity with mobile technology. Greater understanding of the interplay and related mechanisms between auditory and visual systems, which are not well understood yet in the context of mobile technologies, is mandatory.

  11. Alchemical and structural distribution based representation for universal quantum machine learning

    NASA Astrophysics Data System (ADS)

    Faber, Felix A.; Christensen, Anders S.; Huang, Bing; von Lilienfeld, O. Anatole

    2018-06-01

    We introduce a representation of any atom in any chemical environment for the automatized generation of universal kernel ridge regression-based quantum machine learning (QML) models of electronic properties, trained throughout chemical compound space. The representation is based on Gaussian distribution functions, scaled by power laws and explicitly accounting for structural as well as elemental degrees of freedom. The elemental components help us to lower the QML model's learning curve, and, through interpolation across the periodic table, even enable "alchemical extrapolation" to covalent bonding between elements not part of training. This point is demonstrated for the prediction of covalent binding in single, double, and triple bonds among main-group elements as well as for atomization energies in organic molecules. We present numerical evidence that resulting QML energy models, after training on a few thousand random training instances, reach chemical accuracy for out-of-sample compounds. Compound datasets studied include thousands of structurally and compositionally diverse organic molecules, non-covalently bonded protein side-chains, (H2O)40-clusters, and crystalline solids. Learning curves for QML models also indicate competitive predictive power for various other electronic ground state properties of organic molecules, calculated with hybrid density functional theory, including polarizability, heat-capacity, HOMO-LUMO eigenvalues and gap, zero point vibrational energy, dipole moment, and highest vibrational fundamental frequency.

  12. UltraPse: A Universal and Extensible Software Platform for Representing Biological Sequences.

    PubMed

    Du, Pu-Feng; Zhao, Wei; Miao, Yang-Yang; Wei, Le-Yi; Wang, Likun

    2017-11-14

    With the avalanche of biological sequences in public databases, one of the most challenging problems in computational biology is to predict their biological functions and cellular attributes. Most of the existing prediction algorithms can only handle fixed-length numerical vectors. Therefore, it is important to be able to represent biological sequences with various lengths using fixed-length numerical vectors. Although several algorithms, as well as software implementations, have been developed to address this problem, these existing programs can only provide a fixed number of representation modes. Every time a new sequence representation mode is developed, a new program will be needed. In this paper, we propose the UltraPse as a universal software platform for this problem. The function of the UltraPse is not only to generate various existing sequence representation modes, but also to simplify all future programming works in developing novel representation modes. The extensibility of UltraPse is particularly enhanced. It allows the users to define their own representation mode, their own physicochemical properties, or even their own types of biological sequences. Moreover, UltraPse is also the fastest software of its kind. The source code package, as well as the executables for both Linux and Windows platforms, can be downloaded from the GitHub repository.

  13. Automation and validation of the Transflour technology: a universal screening assay for G protein-coupled receptors

    NASA Astrophysics Data System (ADS)

    Hudson, Christine C.; Oakley, Robert H.; Cruickshank, Rachael D.; Rhem, Shay M.; Loomis, Carson R.

    2002-06-01

    G protein-coupled receptors (GPCRs) are historically the richest targets for drug discovery, accounting for nearly 60 percent of prescription drugs. The ligands and functions of only 200 out of possibly 1000 GPCRs are known. Screening methods that directly and accurately measure GPCR activation and inhibition are required to identify ligands for orphan receptors and cultivate superior drugs for known GPCRs. Norak Biosciences utilizes the redistribution of a fluorescently-labeled protein, arrestin, as a novel screen for monitoring GPCR activation. In contrast to the present methods of analyzing GPCR function, the power of the Transfluor technology is in its simplicity, large signal to noise ratio, and applicability to all GPCRs. Here, we demonstrate that the Transfluor technology can be automated and quantitated on high throughput image analysis systems. Cells transfected with an arrestin-green fluorescent protein conjugate and the neurokinin-1 GPCR were seeded on 96-well plates. Activation of the NK-1 receptor with Substance P induced translocation of arrestin-GFP from the cytosol to the receptor. Image quantitation of the arrestin-GFP translocation was used to generate dose dependent curves. These results reveal that the Transfluor technology combined with an image analysis system forms a universal platform capable of measuring ligand-receptor interactions for all GPCRs.

  14. The anamorphic universe

    NASA Astrophysics Data System (ADS)

    Ijjas, Anna; Steinhardt, Paul J.

    2015-10-01

    We introduce ``anamorphic'' cosmology, an approach for explaining the smoothness and flatness of the universe on large scales and the generation of a nearly scale-invariant spectrum of adiabatic density perturbations. The defining feature is a smoothing phase that acts like a contracting universe based on some Weyl frame-invariant criteria and an expanding universe based on other frame-invariant criteria. An advantage of the contracting aspects is that it is possible to avoid the multiverse and measure problems that arise in inflationary models. Unlike ekpyrotic models, anamorphic models can be constructed using only a single field and can generate a nearly scale-invariant spectrum of tensor perturbations. Anamorphic models also differ from pre-big bang and matter bounce models that do not explain the smoothness. We present some examples of cosmological models that incorporate an anamorphic smoothing phase.

  15. The Art of Science

    NASA Astrophysics Data System (ADS)

    Vaidya, Ashwin; Munakata, Mika

    2014-03-01

    The Art of Science project at Montclair State University strives to communicate the creativity inherent in the sciences to students and the general public alike. The project uses connections between the arts and sciences to show the underlying unity and interdependence of the two. The project is planned as one big `performance' bringing together the two disciplines around the theme of sustainability. In the first phase, physics students learned about and built human-powered generators including hand cranks and bicycle units. In the second phase, using the generators to power video cameras, art students worked with a visiting artist to make short films on the subject of sustainability, science, and art. The generators and films were showcased at an annual university Physics and Art exhibition which was open to the university and local community. In the final phase, to be conducted, K12 teachers will learn about the project through a professional development workshop and will be encouraged to adapt the experiment for their own classrooms. The last phase will also combine the university and K12 projects for an exhibition to be displayed on Earth Day, 2014. Project funded by the APS Outreach Grant.

  16. Efficient generation of functional pancreatic β-cells from human induced pluripotent stem cells.

    PubMed

    Yabe, Shigeharu G; Fukuda, Satsuki; Takeda, Fujie; Nashiro, Kiyoko; Shimoda, Masayuki; Okochi, Hitoshi

    2017-02-01

    Insulin-secreting cells have been generated from human embryonic or induced pluripotent stem cells (iPSCs) by mimicking developmental processes. However, these cells do not always secrete glucose-responsive insulin, one of the most important characteristics of pancreatic β-cells. We focused on the importance of endodermal differentiation from human iPSCs in order to obtain functional pancreatic β-cells. A six-stage protocol was established for the differentiation of human iPSCs to pancreatic β-cells using defined culture media without feeders or serum. The effects of CHIR99021, a selective glycogen synthase kinase-3β inhibitor, were examined in the presence of fibroblast growth factor 2, activin, and bone morphogenetic protein 4 (FAB) during definitive endodermal induction by immunostaining for SRY (sex determining region Y)-box 17 (SOX17) and Forkhead box protein A2 (FOXA2). Insulin secretion was compared between the last stage of monolayer culture and spheroid culture conditions. Cultured cells were transplanted under kidney capsules of streptozotocin-diabetic non-obese diabetic-severe combined immunodeficiency mice, and blood glucose levels were measured once a week. Immunohistochemical analyses were performed 4 and 12 weeks after transplantation. Addition of CHIR99021 (3 μmol/L) in the presence of FAB for 2 days improved endodermal cell viability, maintaining the high SOX17-positive rate. Spheroid formation after the endocrine progenitor stage showed more efficient insulin secretion than did monolayer culture. After cell transplantation, diabetic mice had lower blood glucose levels, and islet-like structures were detected in vivo. Functional pancreatic β-cells were generated from human iPSCs. Induction of definitive endoderm and spheroid formation may be key steps for producing these cells. © 2016 Ruijin Hospital, Shanghai Jiaotong University School of Medicine and John Wiley & Sons Australia, Ltd.

  17. Electrodynamics in the Friedmann Robertson Walker universe: Maxwell and Dirac fields in Newman Penrose formalism

    NASA Astrophysics Data System (ADS)

    Khanal, U.

    2006-07-01

    Maxwell and Dirac fields in Friedmann Robertson Walker (FRW) spacetime are investigated using the Newman Penrose method. The variables are all separable, with the angular dependence given by spin-weighted spherical harmonics. All the radial parts reduce to the barrier penetration problem, with mostly repulsive potentials representing the centrifugal energies. Both the helicity states of the photon field see the same potential, but that of the Dirac field see different ones; one component even sees attractive potential in the open universe. The massless fields have the usual exponential time dependences; that of the massive Dirac field is coupled to the evolution of the cosmic scale factor a. The case of the radiation-filled flat universe is solved in terms of the Whittaker function. A formal series solution, valid in any FRW universe, is also presented. The energy density of the Maxwell field is explicitly shown to scale as a-4. The co-moving particle number density of the massless Dirac field is found to be conserved, but that of the massive one is not. Particles flow out of certain regions, and into others, creating regions that are depleted of certain linear and angular momenta states, and others with excess. Such a current of charged particles would constitute an electric current that could generate a cosmic magnetic field. In contrast, the energy density of these massive particles still scales as a-4.

  18. The Guatemala-Penn Partners: An Innovative Inter-Institutional Model for Scientific Capacity-Building, Healthcare Education, and Public Health.

    PubMed

    Paniagua-Avila, Maria Alejandra; Messenger, Elizabeth; Nelson, Caroline A; Calgua, Erwin; Barg, Frances K; Bream, Kent W; Compher, Charlene; Dean, Anthony J; Martinez-Siekavizza, Sergio; Puac-Polanco, Victor; Richmond, Therese S; Roth, Rudolf R; Branas, Charles C

    2017-01-01

    Population health outcomes are directly related to robust public health programs, access to basic health services, and a well-trained health-care workforce. Effective health services need to systematically identify solutions, scientifically test these solutions, and share generated knowledge. The World Health Organization (WHO)'s Global Healthcare Workforce Alliance states that the capacity to perform research is an essential factor for well-functioning public health systems. Low- and middle-income countries have greater health-care worker shortages and lower research capacity than higher-income countries. International global health partnerships between higher-income countries and low-middle-income countries aim to directly address such inequalities through capacity building, a process by which human and institutional resources are strengthened and developed, allowing them to perform high-level functions, solve complex problems, and achieve important objectives. The Guatemala-Penn Partners (GPP) is a collaboration among academic centers in Guatemala and the University of Pennsylvania (Penn), in Philadelphia, Pennsylvania that echoes the vision of the WHO's Global Healthcare Workforce Alliance. This article describes the historical development and present organization of the GPP according to its three guiding principles: university-to-university connections, dual autonomies with locally led capacity building, and mutually beneficial exchanges. It describes the GPP activities within the domains of science, health-care education, and public health, emphasizing implementation factors, such as sustainability and scalability, in relation to the guiding principles. Successes and limitations of this innovative model are also analyzed in the hope that the lessons learned may be applied to similar partnerships across the globe.

  19. The Guatemala-Penn Partners: An Innovative Inter-Institutional Model for Scientific Capacity-Building, Healthcare Education, and Public Health

    PubMed Central

    Paniagua-Avila, Maria Alejandra; Messenger, Elizabeth; Nelson, Caroline A.; Calgua, Erwin; Barg, Frances K.; Bream, Kent W.; Compher, Charlene; Dean, Anthony J.; Martinez-Siekavizza, Sergio; Puac-Polanco, Victor; Richmond, Therese S.; Roth, Rudolf R.; Branas, Charles C.

    2017-01-01

    Population health outcomes are directly related to robust public health programs, access to basic health services, and a well-trained health-care workforce. Effective health services need to systematically identify solutions, scientifically test these solutions, and share generated knowledge. The World Health Organization (WHO)’s Global Healthcare Workforce Alliance states that the capacity to perform research is an essential factor for well-functioning public health systems. Low- and middle-income countries have greater health-care worker shortages and lower research capacity than higher-income countries. International global health partnerships between higher-income countries and low-middle-income countries aim to directly address such inequalities through capacity building, a process by which human and institutional resources are strengthened and developed, allowing them to perform high-level functions, solve complex problems, and achieve important objectives. The Guatemala–Penn Partners (GPP) is a collaboration among academic centers in Guatemala and the University of Pennsylvania (Penn), in Philadelphia, Pennsylvania that echoes the vision of the WHO’s Global Healthcare Workforce Alliance. This article describes the historical development and present organization of the GPP according to its three guiding principles: university-to-university connections, dual autonomies with locally led capacity building, and mutually beneficial exchanges. It describes the GPP activities within the domains of science, health-care education, and public health, emphasizing implementation factors, such as sustainability and scalability, in relation to the guiding principles. Successes and limitations of this innovative model are also analyzed in the hope that the lessons learned may be applied to similar partnerships across the globe. PMID:28443274

  20. Universal quantum computation with temporal-mode bilayer square lattices

    NASA Astrophysics Data System (ADS)

    Alexander, Rafael N.; Yokoyama, Shota; Furusawa, Akira; Menicucci, Nicolas C.

    2018-03-01

    We propose an experimental design for universal continuous-variable quantum computation that incorporates recent innovations in linear-optics-based continuous-variable cluster state generation and cubic-phase gate teleportation. The first ingredient is a protocol for generating the bilayer-square-lattice cluster state (a universal resource state) with temporal modes of light. With this state, measurement-based implementation of Gaussian unitary gates requires only homodyne detection. Second, we describe a measurement device that implements an adaptive cubic-phase gate, up to a random phase-space displacement. It requires a two-step sequence of homodyne measurements and consumes a (non-Gaussian) cubic-phase state.

  1. Integrability from point symmetries in a family of cosmological Horndeski Lagrangians

    NASA Astrophysics Data System (ADS)

    Dimakis, N.; Giacomini, Alex; Paliathanasis, Andronikos

    2017-07-01

    For a family of Horndeski theories, formulated in terms of a generalized Galileon model, we study the integrability of the field equations in a Friedmann-Lemaître-Robertson-Walker space-time. We are interested in point transformations which leave invariant the field equations. Noether's theorem is applied to determine the conservation laws for a family of models that belong to the same general class. The cosmological scenarios with or without an extra perfect fluid with constant equation of state parameter are the two important cases of our study. The de Sitter universe and ideal gas solutions are derived by using the invariant functions of the symmetry generators as a demonstration of our result. Furthermore, we discuss the connection of the different models under conformal transformations while we show that when the Horndeski theory reduces to a canonical field the same holds for the conformal equivalent theory. Finally, we discuss how singular solutions provides nonsingular universes in a different frame and vice versa.

  2. Statistics of resonances for a class of billiards on the Poincaré half-plane

    NASA Astrophysics Data System (ADS)

    Howard, P. J.; Mota-Furtado, F.; O'Mahony, P. F.; Uski, V.

    2005-12-01

    The lower boundary of Artin's billiard on the Poincaré half-plane is continuously deformed to generate a class of billiards with classical dynamics varying from fully integrable to completely chaotic. The quantum scattering problem in these open billiards is described and the statistics of both real and imaginary parts of the resonant momenta are investigated. The evolution of the resonance positions is followed as the boundary is varied which leads to large changes in their distribution. The transition to arithmetic chaos in Artin's billiard, which is responsible for the Poissonian level-spacing statistics of the bound states in the continuum (cusp forms) at the same time as the formation of a set of resonances all with width \\frac{1}{4} and real parts determined by the zeros of Riemann's zeta function, is closely examined. Regimes are found which obey the universal predictions of random matrix theory (RMT) as well as exhibiting non-universal long-range correlations. The Brody parameter is used to describe the transitions between different regimes.

  3. Variation of parameters using Battin's universal functions

    NASA Astrophysics Data System (ADS)

    Burton, James R., III; Melton, Robert G.

    This paper presents a variation of parameters analysis, suitable for use in situations involving small perturbations to the two-body problem, using Battin's universal functions. Unlike the universal variable formulation, this approach avoids the need to switch among different functional representations if the orbit transitions from elliptical, through parabolic, to hyperbolic state, making it attractive for use in simulating low-thrust trajectories ascending to escape or capturing into orbit.

  4. Commercialization of University Research for Technology-Based Economic Development

    ERIC Educational Resources Information Center

    Ferguson, W. Ker

    2011-01-01

    This empirical study investigates the hypothesized relationship between US federally funded university research and development (R&D) and its resulting economic impact, as measured by the level of licensing revenue generated by US universities. The author also examines the key operating statistics of the top-ten licensing income-producing…

  5. Neoliberal Social Inclusion? The Agenda of the Australian Universities Community Engagement Alliance

    ERIC Educational Resources Information Center

    Peacock, David

    2012-01-01

    University-community engagement (UCE) represents a hybrid discourse and a set of practices within contemporary higher education. As a modality of research and teaching, "engagement" denotes the process of universities forming partnerships with external communities for the promised generation of mutually beneficial and socially responsive…

  6. Teaching Gender in Israel: Experiences at the Tel Aviv University

    ERIC Educational Resources Information Center

    Fenster, Tovi

    2011-01-01

    This paper examines the ways in which neoliberal economic policies are affecting academic work in Israeli universities, prioritizing programs that can generate their own funding, External philanthropic support from North America has enabled creation of an interdisciplinary Women and Gender Studies Program at Tel Aviv University that draws…

  7. University-Partnered New School Designs: Fertile Ground for Research-Practice Partnerships

    ERIC Educational Resources Information Center

    Quartz, Karen Hunter; Weinstein, Rhona S.; Kaufman, Gail; Levine, Harold; Mehan, Hugh; Pollock, Mica; Priselac, Jody Z.; Worrell, Frank C.

    2017-01-01

    This commentary suggests that new school design is a fertile policy context for advancing research-practice partnerships. The authors represent four public universities that have created new school designs in partnership with urban school districts. Unlike the laboratory schools of previous generations, these university-partnered public schools…

  8. Locating Supplemental Sources of Revenue to Finance Universities in Nigeria.

    ERIC Educational Resources Information Center

    Ogunla, Akin L.

    1989-01-01

    Identifies possible sources of supplemental income to finance Nigerian universities, including households and commercial and industrial firms. A consumption tax imposed on certain goods and services would generate needed funds. Also, because firms employ university graduates to earn higher profits, their turnover income should be taxed to support…

  9. Effective Pedagogical Strategies for Millennial University Students in Communication Sciences and Disorders

    ERIC Educational Resources Information Center

    Roseberry-McKibbin, Celeste; Pieretti, Robert; Haberstock, Keith; Estrada, Jovany

    2016-01-01

    University instructors nationwide have been recognizing the increased importance of updating classroom teaching strategies to accommodate the needs of the millennial student generation. This article shares results of surveys of 323 university students in communication sciences and disorders and what they view as effective pedagogical strategies…

  10. Generative Themes and At-Risk Students

    ERIC Educational Resources Information Center

    Thelin, William H.; Taczak, Kara

    2007-01-01

    At the University of Akron, the administration decided to segregate the students previously called "provisional" from the "regular" population. As an open-access institution, the university directly admits only approximately 15 percent of the students to a program of study. The vast majority of students start in University College and transfer to…

  11. Effective Prototype Costing Policies in Research Universities: Are They Possible?

    ERIC Educational Resources Information Center

    McClure, Maureen W.; Abu-Duhou, Ibtisam

    Policy problems of prototype costing at research universities are discussed, based on a case study of a clinical treatment prototype program at a research university hospital. Prototypes programs generate reproducible knowledge with useful applications and are primarily developed in professional schools. The potential of using costing prototypes…

  12. Leadership Self-Efficacy in University Co-Curricular Programs

    ERIC Educational Resources Information Center

    Fields, Andrew R.

    2010-01-01

    University educators are concerned with student leadership development in order to generate much-needed leaders in every aspect of society. This sequential mixed methods study found that students who participate in a university co-curricular outdoor education leadership training program, combined with the experience of leading a wilderness…

  13. Changes in the Values and Life Style Preferences of University Students.

    ERIC Educational Resources Information Center

    Thompson, Kenrick S.

    1981-01-01

    The values and life-style preferences of 1978-79 university students are compared with those studied 30 years ago to determine whether university students' preferential rankings of C. Morris's "Ways to Live" (self-sufficient, carefree, etc.) have changed significantly. Possible reasons for differences between the generations are…

  14. Healthy Academic Processes in the University Context

    ERIC Educational Resources Information Center

    Castillo-Cedeño, Ileana; Flores-Davis, Luz Emilia; Miranda-Cervantes, Giselle

    2015-01-01

    This scientific article aims to identify the perceptions of healthy academic administrative processes in the university context. This contribution was directed by socio-educational research processes generated at the National University of Costa Rica (UNA), in the Center for Research and Teaching in Education (CIDE). The issue of health is part of…

  15. Coastal Survey Using Unmanned Aerial Systems

    NASA Astrophysics Data System (ADS)

    Walker, G.

    2012-12-01

    Generating high-resolution 3-dimensional costal imagery from imagery collected on small-unmanned aircraft is opening many opportunities to study marine wildlife and its use of costal habitats as well as climate change effects on northern coasts where storm surges are radically altering the coastline. Additionally, the technology is being evaluated for oil spill response planning and preparation. The University of Alaska Fairbanks works extensively with small-unmanned aircraft and recently began evaluating the aircraft utility for generating survey grade mapping of topographic features. When generating 3-D maps of coastal regions however there are added challenges that the University have identified and are trying to address. Recent projects with Alaska fisheries and BP Exploration Alaska have demonstrated that small-unmanned aircraft can support the generation of map-based products that are nearly impossible to generate with other technologies.

  16. Entropy and cosmology.

    NASA Astrophysics Data System (ADS)

    Zucker, M. H.

    This paper is a critical analysis and reassessment of entropic functioning as it applies to the question of whether the ultimate fate of the universe will be determined in the future to be "open" (expanding forever to expire in a big chill), "closed" (collapsing to a big crunch), or "flat" (balanced forever between the two). The second law of thermodynamics declares that entropy can only increase and that this principle extends, inevitably, to the universe as a whole. This paper takes the position that this extension is an unwarranted projection based neither on experience nonfact - an extrapolation that ignores the powerful effect of a gravitational force acting within a closed system. Since it was originally presented by Clausius, the thermodynamic concept of entropy has been redefined in terms of "order" and "disorder" - order being equated with a low degree of entropy and disorder with a high degree. This revised terminology more subjective than precise, has generated considerable confusion in cosmology in several critical instances. For example - the chaotic fireball of the big bang, interpreted by Stephen Hawking as a state of disorder (high entropy), is infinitely hot and, thermally, represents zero entropy (order). Hawking, apparently focusing on the disorderly "chaotic" aspect, equated it with a high degree of entropy - overlooking the fact that the universe is a thermodynamic system and that the key factor in evaluating the big-bang phenomenon is the infinitely high temperature at the early universe, which can only be equated with zero entropy. This analysis resolves this confusion and reestablishes entropy as a cosmological function integrally linked to temperature. The paper goes on to show that, while all subsystems contained within the universe require external sources of energization to have their temperatures raised, this requirement does not apply to the universe as a whole. The universe is the only system that, by itself can raise its own temperature and thus, by itself; reverse entropy. The vast encompassing gravitational forces that the universe has at its disposal, forces that dominate the phase of contraction, provide the compacting, compressive mechanism that regenerates heat in an expanded, cooled universe and decreases entropy. And this phenomenon takes place without diminishing or depleting the finite amount of mass/energy with which the universe began. The fact that the universe can reverse the entropic process leads to possibilities previously ignored when assessing which of the three models (open, closed, of flat) most probably represents the future of the universe. After analyzing the models, the conclusion reached here is that the open model is only an expanded version of the closed model and therefore is not open, and the closed model will never collapse to a big crunch and, therefore, is not closed. Which leaves a modified model, oscillating forever between limited phases of expansion and contraction (a universe in "dynamic equilibrium") as the only feasible choice.

  17. Psychometric function for NU-6 word recognition in noise: effects of first language and dominant language.

    PubMed

    Shi, Lu-Feng; Zaki, Nancy A

    2014-01-01

    The present study attempted to establish psychometric function in individuals whose first language is not English. Psychometric function was obtained for one of the most commonly used clinical tests, the Northwestern University Auditory Test No. 6 (Tillman & Carhart 1966), so that findings could be directly applied to everyday clinical practice. Five groups of 14 normal-hearing, adult listeners differing in their first language and dominant language (English monolinguals, English- and Arabic-dominant Arabic-English bilinguals, and English- and Russian-dominant Russian-English bilinguals) participated. Both forms of the Northwestern University Auditory Test No. 6 test (8 lists of 50 monosyllabic English words) were presented. The lists were randomly assigned to eight signal-to-noise ratios (-3 to 18 dB in 3 dB steps). Listeners responded verbally and in writing. Psychometric functions were derived via logistic regression and described by two parameters: the 50% correct performance level (θ) and the slope (k). Both English-dominant bilingual groups obtained psychometric functions comparable with monolinguals. The θ and k of the functions for these three groups of participants were consistent with the literature. Compared with these three groups, non-English-dominant bilinguals' functions grew significantly more gradually (i.e., a significantly higher θ and a significantly lower k). No differences in either θ or k were found between bilinguals with the same dominant language but different first languages. Bilinguals reporting themselves to be dominant in English generate monolingual-like psychometric functions. By contrast, a different set of psychometric properties describes the function of bilinguals dominant in their first language. Because first language did not appear to be a significant factor in determining bilinguals' functions, it is concluded that English learning history and English proficiency are more important variables than first language for clinicians to consider when administering English word-recognition tests to their bilingual clients. When working with bilingual clients who are dominant in their first language, clinicians are advised to refer to the normative data reported here specifically for these individuals.

  18. Next Generation of Electrospun Textiles for Chemical and Biological Protection and Air Filtration

    DTIC Science & Technology

    2009-09-01

    these products were comparable to results reported for reactions of potassium 2,3-butanedione monooximate with GD, which produced 31P resonances at...Next Generation of Electrospun Textiles for Chemical and Biological Protection and Air Filtration by Liang Chen B.S. in Chemical Physics, University... of Science and Technology of China, 2001 M.S. in Chemistry, Brown University, 2004 M.S.C.E.P. in Chemical Engineering, Massachusetts Institute of

  19. An automated system for evaluation of the potential functionome: MAPLE version 2.1.0.

    PubMed

    Takami, Hideto; Taniguchi, Takeaki; Arai, Wataru; Takemoto, Kazuhiro; Moriya, Yuki; Goto, Susumu

    2016-07-03

    Metabolic and physiological potential evaluator (MAPLE) is an automatic system that can perform a series of steps used in the evaluation of potential comprehensive functions (functionome) harboured in the genome and metagenome. MAPLE first assigns KEGG Orthology (KO) to the query gene, maps the KO-assigned genes to the Kyoto Encyclopedia of Genes and Genomes (KEGG) functional modules, and then calculates the module completion ratio (MCR) of each functional module to characterize the potential functionome in the user's own genomic and metagenomic data. In this study, we added two more useful functions to calculate module abundance and Q-value, which indicate the functional abundance and statistical significance of the MCR results, respectively, to the new version of MAPLE for more detailed comparative genomic and metagenomic analyses. Consequently, MAPLE version 2.1.0 reported significant differences in the potential functionome, functional abundance, and diversity of contributors to each function among four metagenomic datasets generated by the global ocean sampling expedition, one of the most popular environmental samples to use with this system. MAPLE version 2.1.0 is now available through the web interface (http://www.genome.jp/tools/maple/) 17 June 2016, date last accessed. © The Author 2016. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

  20. Galaxy clustering dependence on the [O II] emission line luminosity in the local Universe

    NASA Astrophysics Data System (ADS)

    Favole, Ginevra; Rodríguez-Torres, Sergio A.; Comparat, Johan; Prada, Francisco; Guo, Hong; Klypin, Anatoly; Montero-Dorta, Antonio D.

    2017-11-01

    We study the galaxy clustering dependence on the [O II] emission line luminosity in the SDSS DR7 Main galaxy sample at mean redshift z ∼ 0.1. We select volume-limited samples of galaxies with different [O II] luminosity thresholds and measure their projected, monopole and quadrupole two-point correlation functions. We model these observations using the 1 h-1 Gpc MultiDark-Planck cosmological simulation and generate light cones with the SUrvey GenerAtoR algorithm. To interpret our results, we adopt a modified (Sub)Halo Abundance Matching scheme, accounting for the stellar mass incompleteness of the emission line galaxies. The satellite fraction constitutes an extra parameter in this model and allows to optimize the clustering fit on both small and intermediate scales (i.e. rp ≲ 30 h-1 Mpc), with no need of any velocity bias correction. We find that, in the local Universe, the [O II] luminosity correlates with all the clustering statistics explored and with the galaxy bias. This latter quantity correlates more strongly with the SDSS r-band magnitude than [O II] luminosity. In conclusion, we propose a straightforward method to produce reliable clustering models, entirely built on the simulation products, which provides robust predictions of the typical ELG host halo masses and satellite fraction values. The SDSS galaxy data, MultiDark mock catalogues and clustering results are made publicly available.

  1. The emerging genomics and systems biology research lead to systems genomics studies.

    PubMed

    Yang, Mary Qu; Yoshigoe, Kenji; Yang, William; Tong, Weida; Qin, Xiang; Dunker, A; Chen, Zhongxue; Arbania, Hamid R; Liu, Jun S; Niemierko, Andrzej; Yang, Jack Y

    2014-01-01

    Synergistically integrating multi-layer genomic data at systems level not only can lead to deeper insights into the molecular mechanisms related to disease initiation and progression, but also can guide pathway-based biomarker and drug target identification. With the advent of high-throughput next-generation sequencing technologies, sequencing both DNA and RNA has generated multi-layer genomic data that can provide DNA polymorphism, non-coding RNA, messenger RNA, gene expression, isoform and alternative splicing information. Systems biology on the other hand studies complex biological systems, particularly systematic study of complex molecular interactions within specific cells or organisms. Genomics and molecular systems biology can be merged into the study of genomic profiles and implicated biological functions at cellular or organism level. The prospectively emerging field can be referred to as systems genomics or genomic systems biology. The Mid-South Bioinformatics Centre (MBC) and Joint Bioinformatics Ph.D. Program of University of Arkansas at Little Rock and University of Arkansas for Medical Sciences are particularly interested in promoting education and research advancement in this prospectively emerging field. Based on past investigations and research outcomes, MBC is further utilizing differential gene and isoform/exon expression from RNA-seq and co-regulation from the ChiP-seq specific for different phenotypes in combination with protein-protein interactions, and protein-DNA interactions to construct high-level gene networks for an integrative genome-phoneme investigation at systems biology level.

  2. "I Don't Think I Could, You Know, Just Teach without Any Emotion": Exploring the Nature and Origin of University Teachers' Emotions

    ERIC Educational Resources Information Center

    Hagenauer, Gerda; Volet, Simone

    2014-01-01

    This article addresses the issue of university teachers' emotions generated through teaching and interacting with students. While research on school teachers' emotions is on the increase, interest in the significance of university teachers' emotions is still limited. In light of the growing attention given to the quality of university teaching…

  3. A School-Based Study with Rome III Criteria on the Prevalence of Functional Gastrointestinal Disorders in Chinese College and University Students

    PubMed Central

    Dong, Yan-Yan; Chen, Fei-Xue; Yu, Yan-Bo; Du, Chao; Qi, Qing-Qing; Liu, Han; Li, Yan-Qing

    2013-01-01

    Background Functional gastrointestinal disorders, including functional dyspepsia, irritable bowel syndrome and functional constipation are very common worldwide. Objective This research aims to estimate the prevalence and associated factors involved in functional gastrointestinal disorders in Chinese college and university students using the Rome III criteria. Methods A total of 5000 students from Shandong University in China were asked in January-May 2012 to complete questionnaires, including the Rome III questionnaire, hospital anxiety and depression scale, and negative life events scale. Results Based on the 4638 students who completed the questionnaire, the prevalence of functional dyspepsia, irritable bowel syndrome and functional constipation in college and university students of North China worked out to be 9.25%, 8.34% and 5.45% respectively. They were more frequent in female students. The factors of anxiety (OR 1.07; 95% CI 0.99 to 1.16, P = 0.002<0.05) and depression (OR 0.55; 95% CI 0.15 to 1.05, P = 0.045<0.05) indicated a high risk of causing irritable bowel syndrome. Conclusion Functional dyspepsia, irritable bowel syndrome and functional constipation were common in college and university students of North China. Psychological disorders such as anxiety and depression provide significant risk factors for irritable bowel syndrome patients. PMID:23349820

  4. Oxidative stress and human spermatozoa: diagnostic and functional significance of aldehydes generated as a result of lipid peroxidation.

    PubMed

    Moazamian, Ryan; Polhemus, Ashley; Connaughton, Haley; Fraser, Barbara; Whiting, Sara; Gharagozloo, Parviz; Aitken, Robert John

    2015-06-01

    Oxidative stress is known to compromise human sperm function and to activate the intrinsic apoptotic cascade in these cells. One of the key features of oxidatively stressed spermatozoa is the induction of a lipid peroxidation process that results in the formation of aldehydes potentially capable of disrupting sperm function through the formation of adducts with DNA and key proteins. In this study, we have examined the impact of a range of small molecular mass aldehydes generated as a consequence of lipid peroxidation on human sperm function and also compared the two most commonly formed compounds, 4-hydroxynonenal (4HNE) and malondialdehyde (MDA), for their relative ability to reflect a state of oxidative stress in these cells. Dramatic differences in the bioactivity of individual aldehydes were observed, that generally correlated with the second order rate constants describing their interaction with the model nucleophile, glutathione. Our results demonstrate that acrolein and 4HNE were the most reactive lipid aldehydes, inhibiting sperm motility while augmenting reactive oxygen species production, lipid peroxidation, oxidative DNA damage and caspase activation, in a dose-dependent manner (P < 0.001). In contrast, a variety of saturated aldehydes and the well-known marker of oxidative stress, MDA, were without effect on this cell type. While MDA was not cytotoxic per se, its generation did reflect the induction of oxidative stress in vivo and in vitro in a manner that was highly correlated with the bioactive lipid aldehyde, 4HNE. Despite such overall correlations, individual patient samples were observed in which either MDA or 4HNE predominated. Given the relative cytotoxicity of 4HNE, we propose that this aldehyde should be the preferred criterion for diagnosing oxidative stress in the male germ line. © The Author 2015. Published by Oxford University Press on behalf of the European Society of Human Reproduction and Embryology. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  5. Managing the Research Function of the University: Pressures and Dilemmas

    ERIC Educational Resources Information Center

    Mintrom, Michael

    2008-01-01

    How should universities manage their research function? Today, research-based knowledge is viewed widely as fundamental to economic advancement. As a result, universities everywhere are facing pressure to rethink their research activities. A general model of the research process is presented here. Linkages are drawn between that process, other…

  6. antaRNA: ant colony-based RNA sequence design.

    PubMed

    Kleinkauf, Robert; Mann, Martin; Backofen, Rolf

    2015-10-01

    RNA sequence design is studied at least as long as the classical folding problem. Although for the latter the functional fold of an RNA molecule is to be found ,: inverse folding tries to identify RNA sequences that fold into a function-specific target structure. In combination with RNA-based biotechnology and synthetic biology ,: reliable RNA sequence design becomes a crucial step to generate novel biochemical components. In this article ,: the computational tool antaRNA is presented. It is capable of compiling RNA sequences for a given structure that comply in addition with an adjustable full range objective GC-content distribution ,: specific sequence constraints and additional fuzzy structure constraints. antaRNA applies ant colony optimization meta-heuristics and its superior performance is shown on a biological datasets. http://www.bioinf.uni-freiburg.de/Software/antaRNA CONTACT: backofen@informatik.uni-freiburg.de Supplementary data are available at Bioinformatics online. © The Author 2015. Published by Oxford University Press.

  7. Lynx web services for annotations and systems analysis of multi-gene disorders.

    PubMed

    Sulakhe, Dinanath; Taylor, Andrew; Balasubramanian, Sandhya; Feng, Bo; Xie, Bingqing; Börnigen, Daniela; Dave, Utpal J; Foster, Ian T; Gilliam, T Conrad; Maltsev, Natalia

    2014-07-01

    Lynx is a web-based integrated systems biology platform that supports annotation and analysis of experimental data and generation of weighted hypotheses on molecular mechanisms contributing to human phenotypes and disorders of interest. Lynx has integrated multiple classes of biomedical data (genomic, proteomic, pathways, phenotypic, toxicogenomic, contextual and others) from various public databases as well as manually curated data from our group and collaborators (LynxKB). Lynx provides tools for gene list enrichment analysis using multiple functional annotations and network-based gene prioritization. Lynx provides access to the integrated database and the analytical tools via REST based Web Services (http://lynx.ci.uchicago.edu/webservices.html). This comprises data retrieval services for specific functional annotations, services to search across the complete LynxKB (powered by Lucene), and services to access the analytical tools built within the Lynx platform. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

  8. Systems Proteomics for Translational Network Medicine

    PubMed Central

    Arrell, D. Kent; Terzic, Andre

    2012-01-01

    Universal principles underlying network science, and their ever-increasing applications in biomedicine, underscore the unprecedented capacity of systems biology based strategies to synthesize and resolve massive high throughput generated datasets. Enabling previously unattainable comprehension of biological complexity, systems approaches have accelerated progress in elucidating disease prediction, progression, and outcome. Applied to the spectrum of states spanning health and disease, network proteomics establishes a collation, integration, and prioritization algorithm to guide mapping and decoding of proteome landscapes from large-scale raw data. Providing unparalleled deconvolution of protein lists into global interactomes, integrative systems proteomics enables objective, multi-modal interpretation at molecular, pathway, and network scales, merging individual molecular components, their plurality of interactions, and functional contributions for systems comprehension. As such, network systems approaches are increasingly exploited for objective interpretation of cardiovascular proteomics studies. Here, we highlight network systems proteomic analysis pipelines for integration and biological interpretation through protein cartography, ontological categorization, pathway and functional enrichment and complex network analysis. PMID:22896016

  9. Conjugated Polymers/DNA Hybrid Materials for Protein Inactivation.

    PubMed

    Zhao, Likun; Zhang, Jiangyan; Xu, Huiming; Geng, Hao; Cheng, Yongqiang

    2016-09-07

    Chromophore-assisted light inactivation (CALI) is a powerful tool for analyzing protein functions due to the high degree of spatial and temporal resolution. In this work, we demonstrate a CALI approach based on conjugated polymers (CPs)/DNA hybrid material for protein inactivation. The target protein is conjugated with single-stranded DNA in advance. Single-stranded DNA can form CPs/DNA hybrid material with cationic CPs via electrostatic and hydrophobic interactions. Through the formation of CPs/DNA hybrid material, the target protein that is conjugated with DNA is brought into close proximity to CPs. Under irradiation, CPs harvest light and generate reactive oxygen species (ROS), resulting in the inactivation of the adjacent target protein. This approach can efficiently inactivate any target protein which is conjugated with DNA and has good specificity and universality, providing a new strategy for studies of protein function and adjustment of protein activity.

  10. Minimal metabolic pathway structure is consistent with associated biomolecular interactions

    PubMed Central

    Bordbar, Aarash; Nagarajan, Harish; Lewis, Nathan E; Latif, Haythem; Ebrahim, Ali; Federowicz, Stephen; Schellenberger, Jan; Palsson, Bernhard O

    2014-01-01

    Pathways are a universal paradigm for functionally describing cellular processes. Even though advances in high-throughput data generation have transformed biology, the core of our biological understanding, and hence data interpretation, is still predicated on human-defined pathways. Here, we introduce an unbiased, pathway structure for genome-scale metabolic networks defined based on principles of parsimony that do not mimic canonical human-defined textbook pathways. Instead, these minimal pathways better describe multiple independent pathway-associated biomolecular interaction datasets suggesting a functional organization for metabolism based on parsimonious use of cellular components. We use the inherent predictive capability of these pathways to experimentally discover novel transcriptional regulatory interactions in Escherichia coli metabolism for three transcription factors, effectively doubling the known regulatory roles for Nac and MntR. This study suggests an underlying and fundamental principle in the evolutionary selection of pathway structures; namely, that pathways may be minimal, independent, and segregated. PMID:24987116

  11. Design of a reading test for low-vision image warping

    NASA Astrophysics Data System (ADS)

    Loshin, David S.; Wensveen, Janice; Juday, Richard D.; Barton, R. Shane

    1993-08-01

    NASA and the University of Houston College of Optometry are examining the efficacy of image warping as a possible prosthesis for at least two forms of low vision -- maculopathy and retinitis pigmentosa. Before incurring the expense of reducing the concept to practice, one would wish to have confidence that a worthwhile improvement in visual function would result. NASA's Programmable Remapper (PR) can warp an input image onto arbitrary geometric coordinate systems at full video rate, and it has recently been upgraded to accept computer- generated video text. We have integrated the Remapper with an SRI eye tracker to simulate visual malfunction in normal observers. A reading performance test has been developed to determine if the proposed warpings yield an increase in visual function; i.e., reading speed. We describe the preliminary experimental results of this reading test with a simulated central field defect with and without remapped images.

  12. Design of a reading test for low vision image warping

    NASA Technical Reports Server (NTRS)

    Loshin, David S.; Wensveen, Janice; Juday, Richard D.; Barton, R. S.

    1993-01-01

    NASA and the University of Houston College of Optometry are examining the efficacy of image warping as a possible prosthesis for at least two forms of low vision - maculopathy and retinitis pigmentosa. Before incurring the expense of reducing the concept to practice, one would wish to have confidence that a worthwhile improvement in visual function would result. NASA's Programmable Remapper (PR) can warp an input image onto arbitrary geometric coordinate systems at full video rate, and it has recently been upgraded to accept computer-generated video text. We have integrated the Remapper with an SRI eye tracker to simulate visual malfunction in normal observers. A reading performance test has been developed to determine if the proposed warpings yield an increase in visual function; i.e., reading speed. We will describe the preliminary experimental results of this reading test with a simulated central field defect with and without remapped images.

  13. Student generated learning objectives: extent of congruence with faculty set objectives and factors influencing their generation.

    PubMed

    Abdul Ghaffar Al-Shaibani, Tarik A; Sachs-Robertson, Annette; Al Shazali, Hafiz O; Sequeira, Reginald P; Hamdy, Hosam; Al-Roomi, Khaldoon

    2003-07-01

    A problem-based learning strategy is used for curriculum planning and implementation at the Arabian Gulf University, Bahrain. Problems are constructed in a way that faculty-set objectives are expected to be identified by students during tutorials. Students in small groups, along with a tutor functioning as a facilitator, identify learning issues and define their learning objectives. We compared objectives identified by student groups with faculty-set objectives to determine extent of congruence, and identified factors that influenced students' ability at identifying faculty-set objectives. Male and female students were segregated and randomly grouped. A faculty tutor was allocated for each group. This study was based on 13 problems given to entry-level medical students. Pooled objectives of these problems were classified into four categories: structural, functional, clinical and psychosocial. Univariate analysis of variance was used for comparison, and a p > 0.05 was considered significant. The mean of overall objectives generated by the students was 54.2%, for each problem. Students identified psychosocial learning objectives more readily than structural ones. Female students identified more psychosocial objectives, whereas male students identified more of structural objectives. Tutor characteristics such as medical/non-medical background, and the years of teaching were correlated with categories of learning issues identified. Students identify part of the faculty-set learning objectives during tutorials with a faculty tutor acting as a facilitator. Students' gender influences types of learning issues identified. Content expertise of tutors does not influence identification of learning needs by students.

  14. Toward a Universal Sea Spray Source Function (UNISOURCE)

    DTIC Science & Technology

    2005-09-30

    Toward a Universal Sea Spray Source Function ( UNISOURCE ) Gerrit de Leeuw TNO Defense, Safety and Security P.O. Box 96864 2509 JG The Hague...2005 to 00-00-2005 4. TITLE AND SUBTITLE Toward a Universal Sea Spray Source Function ( UNISOURCE ) 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c...unclassified c. THIS PAGE unclassified Standard Form 298 (Rev. 8-98) Prescribed by ANSI Std Z39-18 APPROACH As part of UNISOURCE , field

  15. 21 CFR 870.3640 - Indirect pacemaker generator function analyzer.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Indirect pacemaker generator function analyzer... Indirect pacemaker generator function analyzer. (a) Identification. An indirect pacemaker generator function analyzer is an electrically powered device that is used to determine pacemaker function or...

  16. 21 CFR 870.3640 - Indirect pacemaker generator function analyzer.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Indirect pacemaker generator function analyzer... Indirect pacemaker generator function analyzer. (a) Identification. An indirect pacemaker generator function analyzer is an electrically powered device that is used to determine pacemaker function or...

  17. 21 CFR 870.3640 - Indirect pacemaker generator function analyzer.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 8 2012-04-01 2012-04-01 false Indirect pacemaker generator function analyzer... Indirect pacemaker generator function analyzer. (a) Identification. An indirect pacemaker generator function analyzer is an electrically powered device that is used to determine pacemaker function or...

  18. 21 CFR 870.3640 - Indirect pacemaker generator function analyzer.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Indirect pacemaker generator function analyzer... Indirect pacemaker generator function analyzer. (a) Identification. An indirect pacemaker generator function analyzer is an electrically powered device that is used to determine pacemaker function or...

  19. Student Growth from Service-Learning: A Comparison of First-Generation and Non-First-Generation College Students

    ERIC Educational Resources Information Center

    Pelco, Lynn E.; Ball, Christopher T.; Lockeman, Kelly S.

    2014-01-01

    The effect of service-learning courses on student growth was compared for 321 first-generation and 782 non-first-generation undergraduate students at a large urban university. Student growth encompassed both academic and professional skill development. The majority of students reported significant academic and professional development after…

  20. First-Generation Strength: Supporting First-Generation College Students in Study Abroad

    ERIC Educational Resources Information Center

    Rausch, Kyle

    2017-01-01

    First-generation college students are an underrepresented group in terms of study abroad participation nationally and at Arizona State University (ASU). The ASU and International Studies Abroad (ISA) Planning Scholars Scholarship Program was developed to support first-generation college students in their pursuit of study abroad. This mixed-methods…

  1. Antigen Presentation by Individually Transferred HLA Class I Genes in HLA-A, HLA-B, HLA-C Null Human Cell Line Generated Using the Multiplex CRISPR-Cas9 System.

    PubMed

    Hong, Cheol-Hwa; Sohn, Hyun-Jung; Lee, Hyun-Joo; Cho, Hyun-Il; Kim, Tai-Gyu

    Human leukocyte antigens (HLAs) are essential immune molecules that affect transplantation and adoptive immunotherapy. When hematopoietic stem cells or organs are transplanted with HLA-mismatched recipients, graft-versus-host disease or graft rejection can be induced by allogeneic immune responses. The function of each HLA allele has been studied using HLA-deficient cells generated from mutant cell lines or by RNA interference, zinc finger nuclease, and the CRISPR/Cas9 system. To improve HLA gene editing, we attempted to generate an HLA class I null cell line using the multiplex CRISPR/Cas9 system by targeting exons 2 and 3 of HLA-A, HLA-B, and HLA-C genes simultaneously. Multiplex HLA editing could induce the complete elimination of HLA class I genes by bi-allelic gene disruption on target sites which was defined by flow cytometry and target-specific polymerase chain reaction. Furthermore, artificial antigen-presenting cells were generated by transfer of a single HLA class I allele and co-stimulatory molecules into this novel HLA class I null cell line. Artificial antigen-presenting cells showed HLA-restricted antigen presentation following antigen processing and were successfully used for the efficient generation of tumor antigen-specific cytotoxic T cells in vitro. The efficient editing of HLA genes may provide a basis for universal cellular therapies and transplantation.

  2. University of California San Francisco (UCSF-2): Gene Expression Profiling of Normal Mouse Skin, Hras WT and Hras -/- | Office of Cancer Genomics

    Cancer.gov

    University of California San Francisco (UCSF-2): Gene Expression Profiling of Normal Mouse Skin, Hras WT and Hras -/- This data set contains the transcriptional profiles of 20 dorsal skin samples from eight-week-old mice. Mice were generated by crossing FVB/N to Mus spretus mice to generate F1 mice, and then crossing F1 mice back to the FVB/N strain. 10  FVB/N mice lacking Hras1 (aka HrasKO, Hras-/-) and 10  FVB/N mice with wild-type Hras1 were generated. Read the abstract.

  3. The impact of 'Generation Y' occupational therapy students on practice education.

    PubMed

    Hills, Caroline; Ryan, Susan; Smith, Derek R; Warren-Forward, Helen

    2012-04-01

    Many occupational therapy students can be classified as 'Generation Y', a group whose characteristics are perceived as being confident, optimistic and 'techno-savvy'. This study aimed to explore practice educator perceptions of 'Generation Y' students. A questionnaire survey was sent to all practice educators affiliated with the university. The survey contained fixed choice questions on demographics and educators' knowledge of the term 'Generation Y', followed by open-ended questions on practice educator perceptions of occupational therapy 'Generation Y' students and the educational strategies used in practice education. Anonymous responses were analysed using descriptive statistics, attribute coding and content analysis. Most educators considered that there was, in fact, a 'Generation Y student', describing them as confident with technology, over confident in their skill level and easily bored. Practice educators raised concerns regarding students' casual communication, poor professional behaviour, shallow professional reasoning and difficulty when receiving negative feedback. Overall, the results of this study suggest that 'Generation Y' students are having both a negative and a positive impact on practice education in occupational therapy. For educators, management of the overconfident student and professional reasoning development should be addressed in university practice education workshops. For students, the need for clarification of placement expectations on professional behaviour and communication was indicated. Students may also require 'listening to feedback' skill development prior to practice education. Universities and practice educators should consider the development of technological resources for practice education, including simulation, to meet the needs of the, now recognised 'Generation Y' student. © 2011 The Authors. Australian Occupational Therapy Journal © 2011 Occupational Therapy Australia.

  4. The anamorphic universe

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ijjas, Anna; Steinhardt, Paul J., E-mail: aijjas@princeton.edu, E-mail: steinh@princeton.edu

    We introduce ''anamorphic'' cosmology, an approach for explaining the smoothness and flatness of the universe on large scales and the generation of a nearly scale-invariant spectrum of adiabatic density perturbations. The defining feature is a smoothing phase that acts like a contracting universe based on some Weyl frame-invariant criteria and an expanding universe based on other frame-invariant criteria. An advantage of the contracting aspects is that it is possible to avoid the multiverse and measure problems that arise in inflationary models. Unlike ekpyrotic models, anamorphic models can be constructed using only a single field and can generate a nearly scale-invariantmore » spectrum of tensor perturbations. Anamorphic models also differ from pre-big bang and matter bounce models that do not explain the smoothness. We present some examples of cosmological models that incorporate an anamorphic smoothing phase.« less

  5. Strategy to discover diverse optimal molecules in the small molecule universe.

    PubMed

    Rupakheti, Chetan; Virshup, Aaron; Yang, Weitao; Beratan, David N

    2015-03-23

    The small molecule universe (SMU) is defined as a set of over 10(60) synthetically feasible organic molecules with molecular weight less than ∼500 Da. Exhaustive enumerations and evaluation of all SMU molecules for the purpose of discovering favorable structures is impossible. We take a stochastic approach and extend the ACSESS framework ( Virshup et al. J. Am. Chem. Soc. 2013 , 135 , 7296 - 7303 ) to develop diversity oriented molecular libraries that can generate a set of compounds that is representative of the small molecule universe and that also biases the library toward favorable physical property values. We show that the approach is efficient compared to exhaustive enumeration and to existing evolutionary algorithms for generating such libraries by testing in the NKp fitness landscape model and in the fully enumerated GDB-9 chemical universe containing 3 × 10(5) molecules.

  6. k-essence model of inflation, dark matter, and dark energy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bose, Nilok; Majumdar, A. S.

    We investigate the possibility for k-essence dynamics to reproduce the primary features of inflation in the early universe, generate dark matter subsequently, and finally account for the presently observed acceleration. We first show that for a purely kinetic k-essence model the late-time energy density of the universe when expressed simply as a sum of a cosmological constant and a dark matter term leads to a static universe. We then study another k-essence model in which the Lagrangian contains a potential for the scalar field as well as a noncanonical kinetic term. We show that such a model generates the basicmore » features of inflation in the early universe, and also gives rise to dark matter and dark energy at appropriate subsequent stages. Observational constraints on the parameters of this model are obtained.« less

  7. Strategy To Discover Diverse Optimal Molecules in the Small Molecule Universe

    PubMed Central

    2015-01-01

    The small molecule universe (SMU) is defined as a set of over 1060 synthetically feasible organic molecules with molecular weight less than ∼500 Da. Exhaustive enumerations and evaluation of all SMU molecules for the purpose of discovering favorable structures is impossible. We take a stochastic approach and extend the ACSESS framework (Virshup et al. J. Am. Chem. Soc.2013, 135, 7296–730323548177) to develop diversity oriented molecular libraries that can generate a set of compounds that is representative of the small molecule universe and that also biases the library toward favorable physical property values. We show that the approach is efficient compared to exhaustive enumeration and to existing evolutionary algorithms for generating such libraries by testing in the NKp fitness landscape model and in the fully enumerated GDB-9 chemical universe containing 3 × 105 molecules. PMID:25594586

  8. Proposed Strategic Mandates for Ontario Universities: An Organizational Theory Perspective

    ERIC Educational Resources Information Center

    Buzzelli, Michael; Allison, Derek J.

    2017-01-01

    This paper presents an empirical analysis of the Ontario-led strategic mandate agreement (SMA) planning exercise. Focusing on the self-generated strategic mandates of five universities (McMaster, Ottawa, Queen's, Toronto, and Western), we asked how universities responded to this exercise of strategic visioning? The answer to this question is…

  9. China's Recruitment of African University Students: Policy Efficacy and Unintended Outcomes

    ERIC Educational Resources Information Center

    Haugen, Heidi Østbø

    2013-01-01

    This article explores how Sino-African relations are affected by the growing number of Africans who pursue higher education in China. China actively recruits African university students in order to increase soft power and generate income from the export of education services. Semi-structured interviews with African university students suggest that…

  10. University Continuing Education: Strategies for an Uncertain Future.

    ERIC Educational Resources Information Center

    Baskett, H. K.; Hamilton, A. Bruce

    Some of the most common predictions relating to university continuing education units provide a base from which a discussion of future strategies can begin. These include the following: the Big Generation (i.e., baby boomers) is here; knowledge, not products, is the major focus of society; competition for the traditional university continuing…

  11. Mental Health and Clinical Correlates in Lesbian, Gay, Bisexual, and Queer Young Adults

    ERIC Educational Resources Information Center

    Grant, Jon E.; Odlaug, Brian L.; Derbyshire, Katherine; Schreiber, Liana R. N.; Lust, Katherine; Christenson, Gary

    2014-01-01

    Objective: This study examined the prevalence of mental health disorders and their clinical correlates in a university sample of lesbian, gay, bisexual, and queer (LGBQ) students. Participants: College students at a large public university. Methods: An anonymous, voluntary survey was distributed via random e-mail generation to university students…

  12. Sustainable Disposal of Edible Food Byproducts at University Research Farms

    ERIC Educational Resources Information Center

    Baldwin, Sherill; Chung, Kimberly

    2007-01-01

    Purpose: Research at agricultural universities often generates food crops that are edible by-products of the research process. The purpose of this paper is to explore the factors that affect decision-making around the disposal of these crops. Understanding decision-making suggests how universities might include food crop production into campus…

  13. Academic Promotion in Malaysian Public Universities: A Critical Look at Issues and Challenges

    ERIC Educational Resources Information Center

    Azman, Norzaini; Che Omar, Ibrahim; Yunus, Aida Suraya Md; Zain, Ahmad Nurulazam Md

    2016-01-01

    The expansion and transformation of Malaysian universities have generated major changes in the nature of academic employment and the structure of academic promotion in higher education institutions. These changes have considerable implications, in particular for the policy and practice of academic promotion in the public universities. We argue…

  14. The Social Work Research Center at Colorado State University

    ERIC Educational Resources Information Center

    Winokur, Marc A.; Valentine, Deborah P.; Drendel, James M.

    2009-01-01

    The Social Work Research Center is an innovative university-community partnership within the School of Social Work in the College of Applied Human Sciences at Colorado State University. The center is focused on working with county and state child welfare agencies to generate applied research that translates into evidence-based practice for serving…

  15. General conditions for scale-invariant perturbations in an expanding universe

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Geshnizjani, Ghazal; Kinney, William H.; Dizgah, Azadeh Moradinezhad, E-mail: ggeshnizjani@perimeterinstitute.ca, E-mail: whkinney@buffalo.edu, E-mail: am248@buffalo.edu

    2011-11-01

    We investigate the general properties of expanding cosmological models which generate scale-invariant curvature perturbations in the presence of a variable speed of sound. We show that in an expanding universe, generation of a super-Hubble, nearly scale-invariant spectrum of perturbations over a range of wavelengths consistent with observation requires at least one of three conditions: (1) accelerating expansion, (2) a speed of sound faster than the speed of light, or (3) super-Planckian energy density.

  16. Experimental Two-Phase Liquid-Metal Magnetohydrodynamic Generator Program

    DTIC Science & Technology

    1979-04-01

    34 ME 5-77, Ben Gurlon University of the Negev , Beer- Sheva, Israel. BRANOVER, H., ELBOCHER, A., HOCH, E., UNGER, Y., YAKHOT, A., and ZILBERMAN, I...1978, "Hydrodynamic Investigation of Single and Two-Phase Flow Ill Liquid Metal MHD Generator Channels," ME 4-78, Ben Gurion University o the Negev , Beer...Conducting Fluid Flows in Magnetic Fields," UCRL-51010, Lawrence Radiation Laboratory, Livermore, CA. LAVRENTIEV, I. V., 1967, "Effect of Baffle Location

  17. Multigenerational challenges in academic medicine: UCDavis's responses.

    PubMed

    Howell, Lydia Pleotis; Servis, Gregg; Bonham, Ann

    2005-06-01

    Academic medicine is a unique work environment, one of the few where members of four different generations regularly interact and where multigenerational teams are key to fulfilling its missions, particularly education. This can lead to increased creativity, but also to intergenerational conflict, since each generation has different values and expectations. The authors describe multigenerational challenges confronted at the University of California, Davis, School of Medicine, and that school's responses to them. These challenges include issues related to work hours, workload, compensation, evaluation for advancement, recruitment and retention, and attendance at required meetings. Awareness of the different generational qualities and values allowed the school of medicine to identify the multigenerational origin of many of these ongoing issues and challenges and to plan appropriate solutions within the Office of Academic Affairs. These include policy changes related to work-life balance, utilizing multiple faculty tracks with different roles, allowing part-time faculty appointments, creating a variety of faculty development programs geared toward different generational needs (which utilize flexible modules, menus of options, and alternative technologies for presentation), defining appropriate reward and incentives through compensations plans, and creating peer-reviewed awards. The authors conclude that these efforts mitigate conflict, promote diversity, and allow multigenerational teams to function more effectively and creatively in education, research, and clinical care. Ongoing evaluation will further refine this approach.

  18. Truck Thermoacoustic Generator and Chiller

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Keolian, Robert

    2011-03-31

    This Final Report describes the accomplishments of the US Department of Energy (DOE) cooperative agreement project DE-FC26-04NT42113 - Truck Thermoacoustic Generator and Chiller - whose goal is to design, fabricate and test a thermoacoustic piezoelectric generator and chiller system for use on over-the-road heavy-duty-diesel trucks, driven alternatively by the waste heat of the main diesel engine exhaust or by a burner integrated into the thermoacoustic system. The thermoacoustic system would utilize engine exhaust waste heat to generate electricity and cab air conditioning, and would also function as an auxiliary power unit (APU) for idle reduction. The unit was to bemore » tested in Volvo engine performance and endurance test cells and then integrated onto a Class 8 over-the-road heavy-duty-diesel truck for further testing on the road. The project has been a collaboration of The Pennsylvania State University Applied Research Laboratory, Los Alamos National Laboratory, Clean Power Resources Inc., and Volvo Powertrain (Mack Trucks Inc.). Cost share funding was provided by Applied Research Laboratory, and by Clean Power Resources Inc via its grant from Innovation Works - funding that was derived from the Commonwealth of Pennsylvania. Los Alamos received its funding separately through DOE Field Work Proposal 04EE09.« less

  19. a New Animation of Subduction Processes for Undergraduates

    NASA Astrophysics Data System (ADS)

    Stern, R. J.; Lieu, W. K.; Mantey, A.; Ward, A.; Todd, F.; Farrar, E.; Sean, M.; Windler, J.

    2015-12-01

    The subduction of oceanic lithosphere beneath convergent plate margins is a fundamental plate tectonic concept and an important Earth process. It is responsible for some of Earth's most dangerous natural hazards including earthquakes and volcanic eruptions but also produced the continental crust and important mineral deposits. A range of geoscientific efforts including NSF MARGINS and GeoPRISMS initiatives have advanced our understanding of subduction zone processes. In spite the importance of subduction zones and our advancing understanding of how these function, there are few animations that clearly explain the subduction process to non-expert audiences. This deficiency reflects the disparate expertises between geoscientists who know the science but have weak animation skills and digital artists and animators who have strong skills in showing objects in motion but are not experts in natural processes like plate tectonics. This transdisciplinary gap can and should be bridged. With a small grant from NSF (DUE-1444954) we set about to generate a realistic subduction zone animation aimed at the university undergraduate audience by first working within our university to rough out a draft animation and then contract a professional to use this to construct the final version. UTD Geosciences faculty (Stern) and graduate student (Lieu) teamed up with faculty from UTD School of Arts, Technology, and Emerging Communication (ATEC)(Farrar, Fechter, and McComber) to identify and recruit talented ATEC undergraduate students (Mantey, Ward) to work on the project. Geoscientists assembled a storyboard and met weekly with ATEC undergraduates to generate a first draft of the animation, which guided development of an accompanying narrative. The draft animation with voice-over was then handed off to professional animator Windler (Archistration CG) to generate the final animation. We plan to show both the student-generated draft version and the final animation during our presentation. The final animation will be freely available via the internet and will also be used as a supplement for McGraw-Hill textbooks in oceanography, physical geology, Earth science, geography, historical geology, natural hazards, and natural resources.

  20. Pure MW Data for v=0-6 of PbI Give Vibrational Spacings and a Full Analytic Potential Energy Function

    NASA Astrophysics Data System (ADS)

    Yoo, Ji Ho (Chris); Evans, Corey; Walker, Nick; Le Roy, Robert J.

    2015-06-01

    At last year's ISMS meeting, Zaleski et al. reported new broadband MW spectroscopy measurements of pure rotational transitions in the v=0-6 levels of the ^2Π1/2 ground electronic state of PbI. The analysis presented at that time was a conventional v-level by v-level `band-constant' analysis performed using the PGopher program. That level-by-level PGopher analysis yielded values of B_v, D_v and five spin-splitting parameters for each vibrational level of each isotopologue. Ignoring the spin-splitting information, the B_v and D_v values were used to generate a set of synthetic pure R(0) transitions for each level that were taken to represent the ``mechanical'' information about the molecule contained in these spectra. A standard direct-potential-fit (DPF) analysis was then used to fit these data to an ``Expanded Morse Oscillator'' (EMO) potential function form. The well-depth parameter D_e was fixed at the literature value, while values of the equilibrium distance r_e and three EMO exponent-coefficient expansion `potential shape' parameters are determined from the fits. The best fits to the data yield potentials whose fundamental vibrational spacings are in excellent agreement with experiment together with reliable predictions for the first five overtone energies. D.P. Zaleski, H. Köckert, S.L. Stephens, N. Walker, L.-M. Dickens, and C. Evans, paper RE08 at the 69th International Symposium on Molecular Spectroscopy, University of Illinois (2014). PGopher - a Program for Simulating Rotational Structure, C. M. Western, University of Bristol, http://pgopher.chm.bris.ac.uk DPotFit 2.0: A Computer Program for fitting Diatomic Molecule Spectra to Potential Energy Functions, R.J. Le Roy, J. Seto and Y. Huang, University of Waterloo Chemical Physics Research Report CP-667 (2013); see http://leroy.uwaterloo.ca/programs/. K. Ziebarth, R. Breidohr, O. Shestakov and E.H. Fink, Chem. Phys. Lett. 190, 271 (1992).

  1. Reducing the socio-economic status achievement gap at University by promoting mastery-oriented assessment.

    PubMed

    Smeding, Annique; Darnon, Céline; Souchal, Carine; Toczek-Capelle, Marie-Christine; Butera, Fabrizio

    2013-01-01

    In spite of official intentions to reduce inequalities at University, students' socio-economic status (SES) is still a major determinant of academic success. The literature on the dual function of University suggests that University serves not only an educational function (i.e., to improve students' learning), but also a selection function (i.e., to compare people, and orient them towards different positions in society). Because current assessment practices focus on the selection more than on the educational function, their characteristics fit better with norms and values shared by dominant high-status groups and may favour high-SES students over low-SES students in terms of performances. A focus on the educational function (i.e., mastery goals), instead, may support low-SES students' achievement, but empirical evidence is currently lacking. The present research set out to provide such evidence and tested, in two field studies and a randomised field experiment, the hypothesis that focusing on University's educational function rather than on its selection function may reduce the SES achievement gap. Results showed that a focus on learning, mastery-oriented goals in the assessment process reduced the SES achievement gap at University. For the first time, empirical data support the idea that low-SES students can perform as well as high-SES students if they are led to understand assessment as part of the learning process, a way to reach mastery goals, rather than as a way to compare students to each other and select the best of them, resulting in performance goals. This research thus provides a theoretical framework to understand the differential effects of assessment on the achievement of high and low-SES students, and paves the way toward the implementation of novel, theory-driven interventions to reduce the SES-based achievement gap at University.

  2. On the Universality and Non-Universality of Spiking Neural P Systems With Rules on Synapses.

    PubMed

    Song, Tao; Xu, Jinbang; Pan, Linqiang

    2015-12-01

    Spiking neural P systems with rules on synapses are a new variant of spiking neural P systems. In the systems, the neuron contains only spikes, while the spiking/forgetting rules are moved on the synapses. It was obtained that such system with 30 neurons (using extended spiking rules) or with 39 neurons (using standard spiking rules) is Turing universal. In this work, this number is improved to 6. Specifically, we construct a Turing universal spiking neural P system with rules on synapses having 6 neurons, which can generate any set of Turing computable natural numbers. As well, it is obtained that spiking neural P system with rules on synapses having less than two neurons are not Turing universal: i) such systems having one neuron can characterize the family of finite sets of natural numbers; ii) the family of sets of numbers generated by the systems having two neurons is included in the family of semi-linear sets of natural numbers.

  3. Community-university partnerships in occupational therapy education: a preliminary exploration of practice in a European context.

    PubMed

    McGrath, Margaret; Moldes, Ines Viana; Fransen, Hetty; Hofstede-Wessels, Saskia; Lilienberg, Karin

    2014-01-01

    To explore community-university partnerships in occupational therapy education in Europe. Educators from Europe were invited to participate in the study. Data were collected using a questionnaire designed for the study. Eleven completed questionnaires were included. Descriptive statistics were generated from quantitative data while qualitative data were analyzed using inductive content analysis. The majority of participants reported that community-university partnerships were part of the third year of undergraduate occupational therapy studies. Partners were from a broad range of sectors. The activities undertaken were typically focused on specific target groups within the community. Three main themes emerged from the qualitative analysis (i) instigating community-university partnerships, (ii) processes of creating and sustaining partnerships and (iii) perceived outcomes of community-university partnerships. This is the first study of community-university partnerships in Europe generating some useful findings. Clarification is needed regarding the use of the term community-university partnership. Educators are called upon to consider how partnerships are embedded into curricula and to address issues of sustainability. Healthcare education should prepare rehabilitation professionals to collaborate with diverse communities. Community--university collaborations appear to offer opportunities to support students to develop competences for future community orientated practice. Key issues to be considered include choice of pedagogical approach, issues of reciprocity and sustainability.

  4. East Tennessee State University's "Make a Difference" Project: Using a Team-Based Consultative Model To Conduct Functional Behavioral Assessments.

    ERIC Educational Resources Information Center

    Vaughn, Kelley; Hales, Cindy; Bush, Marta; Fox, James

    1998-01-01

    Describes implementation of functional behavioral assessment (FBA) through collaboration between a university (East Tennessee State University) and the local school system. Discusses related issues such as factors in team training, team size, FBA adaptations, and replicability of the FBA team model. (Author/DB)

  5. An Alternative Theory of the Universe Based Upon a Balanced Particulate-Ethereal, Tri-Based, Ten-Dimensional, Self-Propagating Matrix

    NASA Astrophysics Data System (ADS)

    Cogley, Thomas

    2010-02-01

    A model of the Universe of man designated ``MU'' is proposed. Based upon 10 working and 1 generating dimension or firmament the makeup of MU will be described. The balance of the Universe and the position form of time space and gravity will be described. The particulate physical and ethereal nature is one that departs from previous theories but is of the utmost importance in balancing the Universe and accounting for the shortfalls of the proposed theories of the day. The ten-dimensional +1 matrix will be described along with its sub-parts each distinct and closely bound to a separate dimensional level. The connections or doors between the firmaments and the methods by which they stay open close and remain separated from each other is described. Of great importance is the propagation of a firmament within the Matrix. Each firmament is itself independent and distinctly wrapped by a unique layer of the matrix. Yet each firmament is itself a separate image or part of the next larger firmament as can be thought of a subunit of that firmament. Thus each is separate yet still a part of the greater sized firmament that follows. The sizes of the dimensions are in a repeatable and constant multiple of the previous dimension. Sizes of the dimensions will be discussed. The function, form, and structural layout of the universe will be shown to have a fractal relationship to natural systems on earth and even to the image of man. )

  6. UFO - The Universal FEYNRULES Output

    NASA Astrophysics Data System (ADS)

    Degrande, Céline; Duhr, Claude; Fuks, Benjamin; Grellscheid, David; Mattelaer, Olivier; Reiter, Thomas

    2012-06-01

    We present a new model format for automatized matrix-element generators, the so-called Universal FEYNRULES Output (UFO). The format is universal in the sense that it features compatibility with more than one single generator and is designed to be flexible, modular and agnostic of any assumption such as the number of particles or the color and Lorentz structures appearing in the interaction vertices. Unlike other model formats where text files need to be parsed, the information on the model is encoded into a PYTHON module that can easily be linked to other computer codes. We then describe an interface for the MATHEMATICA package FEYNRULES that allows for an automatic output of models in the UFO format.

  7. Kansas Wind Energy Consortium

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gruenbacher, Don

    2015-12-31

    This project addresses both fundamental and applied research problems that will help with problems defined by the DOE “20% Wind by 2030 Report”. In particular, this work focuses on increasing the capacity of small or community wind generation capabilities that would be operated in a distributed generation approach. A consortium (KWEC – Kansas Wind Energy Consortium) of researchers from Kansas State University and Wichita State University aims to dramatically increase the penetration of wind energy via distributed wind power generation. We believe distributed generation through wind power will play a critical role in the ability to reach and extend themore » renewable energy production targets set by the Department of Energy. KWEC aims to find technical and economic solutions to enable widespread implementation of distributed renewable energy resources that would apply to wind.« less

  8. Cross-Generational Storytelling

    ERIC Educational Resources Information Center

    Smith, Cindy; Thurston, Judy Kay

    2007-01-01

    What happens when you combine senior citizens, pre-service art teachers, and elementary students? Cross-generational connections based on sharing memories, ideas, skills, laughter, tears, and creativity. The authors describe the cross-generational book exchange project. This project was initiated when a group of Central Michigan University (CMU)…

  9. On the Cubic Lattice Green Functions

    NASA Astrophysics Data System (ADS)

    Joyce, G. S.

    1994-05-01

    Wheatstone Physics Laboratory, King's College, University of London, Strand, London WC2R 2LS, U.K. It is proved that K (k+) = [(4-eta )1/2 - (1 - eta )1/2]K(k-), where eta is a complex variable which lies in a certain region R2 of the eta plane, and K (k±) are complete elliptic integrals of the first kind with moduli k± which are given by k±2equiv k±2(eta ) = 1/2 ± 1/4eta (4 - eta )1/2 - 1/4(2-eta )(1-eta )1/2. This basic result is then used to express the face-centred cubic and simple cubic lattice Green functions at the origin in terms of the square of a complete elliptic integral of the first kind. Several new identities involving the Heun function F(a, b; α , β , γ , δ ; eta ) are also derived. Next it is shown that the three cubic lattice Green functions all have parametric representations which involve the Green function for the two-dimensional honeycomb lattice. Finally, the results are applied to a variety of problems in lattice statistics. In particular, a new simplified formula for the generating function of staircase polygons on a four-dimensional hypercubic lattice is derived.

  10. Study of energetic particle dynamics in Harbin Dipole eXperiment (HDX) on Space Plasma Environment Research Facility (SPERF)

    NASA Astrophysics Data System (ADS)

    Zhibin, W.; Xiao, Q.; Wang, X.; Xiao, C.; Zheng, J.; E, P.; Ji, H.; Ding, W.; Lu, Q.; Ren, Y.; Mao, A.

    2015-12-01

    Zhibin Wang1, Qingmei Xiao1, Xiaogang Wang1, Chijie Xiao2, Jinxing Zheng3, Peng E1, Hantao Ji1,5, Weixing Ding4, Quaming Lu6, Y. Ren1,5, Aohua Mao11 Laboratory for Space Environment and Physical Sciences, Harbin Institute of Technology, Harbin, China 150001 2 State Key Lab of Nuclear Physics & Technology, and School of Physics, Peking University, Beijing, China 100871 3ASIPP, Hefei, China, 230031 4University of California at Los Angeles, Los Angeles, CA, 90095 5Princeton Plasma Physics Laboratory, Princeton University, Princeton, NJ 08543 6University of Science and Technology of China, Hefei, China, 230026 A new terrella device for laboratory studies of space physics relevant to the inner magnetospheric plasmas, Harbin Dipole eXperiment (HDX), is scheduled to be built at Harbin Institute of Technology (HIT), China. HDX is one of two essential parts of Space Plasma Environment Research Facility (SPERF), which is a major national research facility for space physics studies. HDX is designed to provide a laboratory experimental platform to reproduce the earth's magnetospheric structure for investigations on the mechanism of acceleration/loss and wave-particle interaction of energetic particles in radiation belt, and on the influence of magnetic storms on the inner magnetosphere. It can be operated together with Harbin Reconnection eXperiment (HRX), which is another part of SPERF, to study the fundamental processes during interactions between solar wind and Earth's magnetosphere. In this presentation, the scientific goals and experimental plans for HDX, together with the means applied to generate the plasma with desired parameters, including multiple plasma sources and different kinds of coils with specific functions, as well as advanced diagnostics designed to be equipped to the facility for multi-functions, are reviewed. Three typical scenarios of HDX with operations of various coils and plasma sources to study specific physical processes in space plasmas will also be presented.

  11. Exploring First-Generation Students at Midwestern University and Why They Persist to Graduation

    ERIC Educational Resources Information Center

    Rodgers, Christie L.

    2013-01-01

    The purpose of this study was to explore the perceptions of first-generation college students and learn why they believed they persisted to graduation. First-generation students are students whose parents did not attend college. Research literature on the topic reflects a the concern for first-generation students and their decreased likelihood of…

  12. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions.

    PubMed

    Hume, Maxwell A; Barrera, Luis A; Gisselbrecht, Stephen S; Bulyk, Martha L

    2015-01-01

    The Universal PBM Resource for Oligonucleotide Binding Evaluation (UniPROBE) serves as a convenient source of information on published data generated using universal protein-binding microarray (PBM) technology, which provides in vitro data about the relative DNA-binding preferences of transcription factors for all possible sequence variants of a length k ('k-mers'). The database displays important information about the proteins and displays their DNA-binding specificity data in terms of k-mers, position weight matrices and graphical sequence logos. This update to the database documents the growth of UniPROBE since the last update 4 years ago, and introduces a variety of new features and tools, including a new streamlined pipeline that facilitates data deposition by universal PBM data generators in the research community, a tool that generates putative nonbinding (i.e. negative control) DNA sequences for one or more proteins and novel motifs obtained by analyzing the PBM data using the BEEML-PBM algorithm for motif inference. The UniPROBE database is available at http://uniprobe.org. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

  13. Cerebral palsy in Victoria: motor types, topography and gross motor function.

    PubMed

    Howard, Jason; Soo, Brendan; Graham, H Kerr; Boyd, Roslyn N; Reid, Sue; Lanigan, Anna; Wolfe, Rory; Reddihough, Dinah S

    2005-01-01

    To study the relationships between motor type, topographical distribution and gross motor function in a large, population-based cohort of children with cerebral palsy (CP), from the State of Victoria, and compare this cohort to similar cohorts from other countries. An inception cohort was generated from the Victorian Cerebral Palsy Register (VCPR) for the birth years 1990-1992. Demographic information, motor types and topographical distribution were obtained from the register and supplemented by grading gross motor function according to the Gross Motor Function Classification System (GMFCS). Complete data were obtained on 323 (86%) of 374 children in the cohort. Gross motor function varied from GMFCS level I (35%) to GMFCS level V (18%) and was similar in distribution to a contemporaneous Swedish cohort. There was a fairly even distribution across the topographical distributions of hemiplegia (35%), diplegia (28%) and quadriplegia (37%) with a large majority of young people having the spastic motor type (86%). The VCPR is ideal for population-based studies of gross motor function in children with CP. Gross motor function is similar in populations of children with CP in developed countries but the comparison of motor types and topographical distribution is difficult because of lack of consensus with classification systems. Use of the GMFCS provides a valid and reproducible method for clinicians to describe gross motor function in children with CP using a universal language.

  14. Studying the Evolution of the Contamination of the Sunyaev-Zel'dovich effect due to High-redshift (sub-)mm Galaxies

    NASA Astrophysics Data System (ADS)

    Montana, Alfredo; Aretxaga, I.; Austermann, J.; Bock, J.; Chapin, E.; Gaztanaga, E.; Hughes, D.; Lowenthal, J.; Mauskopf, P.; Perera, T.; Scott, K.; Wilson, G.; Yun, M.

    2007-05-01

    We present simulations of the submillimetre/millimetre (sub-mm) sky to study the environment of luminous starburst galaxies, radio galaxies and AGN towards biased-regions (large-scale over-densities) in the high-redshift universe. Guided by recent results from AzTEC extragalactic surveys at 1.1mm, we describe the impact of this population of galaxies, that dominate the sub-mm extragalactic background, on the detectability of the Sunyaev-Zel'dovich effect (SZE) as a function of redshift. These results will be presented in the context of the next generation of wide-area surveys to identify high-redshift clusters via the SZE.

  15. Shedding light on baryonic dark matter.

    PubMed

    Silk, J

    1991-02-01

    Halo dark matter, if it is baryonic, may plausibly consist of compact stellar remnants. Jeans mass clouds containing 10(6) to 10(8) solar masses could have efficiently formed stars in the early universe and could plausibly have generated, for a suitably top-heavy stellar initial mass function, a high abundance of neutron stars as well as a small admixture of long-lived low mass stars. Within the resulting clusters of dark remnants, which eventually are tidally disrupted when halos eventually form, captures of neutron stars by non-degenerate stars resulted in formation of close binaries. These evolve to produce, by the present epoch, an observable x-ray signal associated with dark matter aggregations in galaxy halos and galaxy cluster cores.

  16. The EcoCyc database: reflecting new knowledge about Escherichia coli K-12.

    PubMed

    Keseler, Ingrid M; Mackie, Amanda; Santos-Zavaleta, Alberto; Billington, Richard; Bonavides-Martínez, César; Caspi, Ron; Fulcher, Carol; Gama-Castro, Socorro; Kothari, Anamika; Krummenacker, Markus; Latendresse, Mario; Muñiz-Rascado, Luis; Ong, Quang; Paley, Suzanne; Peralta-Gil, Martin; Subhraveti, Pallavi; Velázquez-Ramírez, David A; Weaver, Daniel; Collado-Vides, Julio; Paulsen, Ian; Karp, Peter D

    2017-01-04

    EcoCyc (EcoCyc.org) is a freely accessible, comprehensive database that collects and summarizes experimental data for Escherichia coli K-12, the best-studied bacterial model organism. New experimental discoveries about gene products, their function and regulation, new metabolic pathways, enzymes and cofactors are regularly added to EcoCyc. New SmartTable tools allow users to browse collections of related EcoCyc content. SmartTables can also serve as repositories for user- or curator-generated lists. EcoCyc now supports running and modifying E. coli metabolic models directly on the EcoCyc website. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

  17. Vertical Root Fracture initiation in curved roots after root canal preparation: A dentinal micro-crack analysis with LED transillumination

    PubMed Central

    Martín-Biedma, Benjamín; Varela-Patiño, Purificación; Ruíz-Piñón, Manuel; Castelo-Baz, Pablo

    2017-01-01

    Background One of the causative factors of root defects is the increased friction produced by rotary instrumentation. A high canal curvature may increase stress, making the tooth more susceptible to dentinal cracks. The purpose of this study was to evaluate dentinal micro-crack formation with the ProTaper NEXT and ProTaper Universal systems using LED transillumination, and to analyze the micro-crack generated at the point of maximum canal curvature. Material and Methods 60 human mandibular premolars with curvatures between 30–49° and radii between 2–4 mm were used. The root canals were instrumented using the Protaper Universal® and Protaper NEXT® systems, with the aid of the Proglider® system. The obtained samples were sectioned transversely before subsequent analysis with LED transillumination at 2 mm and 8 mm from the apex and at the point of maximum canal curvature. Defects were scored: 0 for no defects; and 1 for micro-cracks. Results Root defects were not observed in the control group. The ProTaper NEXT system caused fewer defects (16.7%) than the ProTaper Universal system (40%) (P<0.05). The ProTaper Universal system caused significantly more micro-cracks at the point of maximum canal curvature than the ProTaper NEXT system (P<0.05). Conclusions Rotary instrumentation systems often generate root defects, but the ProTaper NEXT system generated fewer dentinal defects than the ProTaper Universal system. A higher prevalence of defects was found at the point of maximum curvature in the ProTaper Universal group. Key words:Curved root, Micro-crack, point of maximum canal curvature, ProTaper NEXT, ProTaper Universal, Vertical root fracture. PMID:29167712

  18. A domain-based approach for analyzing the function of aluminum-activated malate transporters from wheat (Triticum aestivum) and Arabidopsis thaliana in Xenopus oocytes.

    PubMed

    Sasaki, Takayuki; Tsuchiya, Yoshiyuki; Ariyoshi, Michiyo; Ryan, Peter R; Furuichi, Takuya; Yamamoto, Yoko

    2014-12-01

    Wheat and Arabidopsis plants respond to aluminum (Al) ions by releasing malate from their root apices via Al-activated malate transporter. Malate anions bind with the toxic Al ions and contribute to the Al tolerance of these species. The genes encoding the transporters in wheat and Arabidopsis, TaALMT1 and AtALMT1, respectively, were expressed in Xenopus laevis oocytes and characterized electrophysiologically using the two-electrode voltage clamp system. The Al-activated currents generated by malate efflux were detected for TaALMT1 but not for AtALMT1. Chimeric proteins were generated by swapping the N- and C-terminal halves of TaALMT1 and AtALMT1 (Ta::At and At::Ta). When these chimeras were characterized in oocytes, Al-activated malate efflux was detected for the Ta::At chimera but not for At::Ta, suggesting that the N-terminal half of TaALMT1 is necessary for function in oocytes. An additional chimera, Ta(48)::At, generated by swapping 17 residues from the N-terminus of AtALMT1 with the equivalent 48 residues from TaALMT1, was sufficient to support transport activity. This 48 residue region includes a helical region with a putative transmembrane domain which is absent in AtALMT1. The deletion of this domain from Ta(48)::At led to the complete loss of transport activity. Furthermore, truncations and a deletion at the C-terminal end of TaALMT1 indicated that a putative helical structure in this region was also required for transport function. This study provides insights into the structure-function relationships of Al-activated ALMT proteins by identifying specific domains on the N- and C-termini of TaALMT1 that are critical for basal transport function and Al responsiveness in oocytes. © The Author 2014. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  19. Sak and Sak4 recombinases are required for bacteriophage replication in Staphylococcus aureus.

    PubMed

    Neamah, Maan M; Mir-Sanchis, Ignacio; López-Sanz, María; Acosta, Sonia; Baquedano, Ignacio; Haag, Andreas F; Marina, Alberto; Ayora, Silvia; Penadés, José R

    2017-06-20

    DNA-single strand annealing proteins (SSAPs) are recombinases frequently encoded in the genome of many bacteriophages. As SSAPs can promote homologous recombination among DNA substrates with an important degree of divergence, these enzymes are involved both in DNA repair and in the generation of phage mosaicisms. Here, analysing Sak and Sak4 as representatives of two different families of SSAPs present in phages infecting the clinically relevant bacterium Staphylococcus aureus, we demonstrate for the first time that these enzymes are absolutely required for phage reproduction. Deletion of the genes encoding these enzymes significantly reduced phage replication and the generation of infectious particles. Complementation studies revealed that these enzymes are required both in the donor (after prophage induction) and in the recipient strain (for infection). Moreover, our results indicated that to perform their function SSAPs require the activity of their cognate single strand binding (Ssb) proteins. Mutational studies demonstrated that the Ssb proteins are also required for phage replication, both in the donor and recipient strain. In summary, our results expand the functions attributed to the Sak and Sak4 proteins, and demonstrate that both SSAPs and Ssb proteins are essential for the life cycle of temperate staphylococcal phages. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

  20. Probabilistic streamflow forecasting for hydroelectricity production: A comparison of two non-parametric system identification algorithms

    NASA Astrophysics Data System (ADS)

    Pande, Saket; Sharma, Ashish

    2014-05-01

    This study is motivated by the need to robustly specify, identify, and forecast runoff generation processes for hydroelectricity production. It atleast requires the identification of significant predictors of runoff generation and the influence of each such significant predictor on runoff response. To this end, we compare two non-parametric algorithms of predictor subset selection. One is based on information theory that assesses predictor significance (and hence selection) based on Partial Information (PI) rationale of Sharma and Mehrotra (2014). The other algorithm is based on a frequentist approach that uses bounds on probability of error concept of Pande (2005), assesses all possible predictor subsets on-the-go and converges to a predictor subset in an computationally efficient manner. Both the algorithms approximate the underlying system by locally constant functions and select predictor subsets corresponding to these functions. The performance of the two algorithms is compared on a set of synthetic case studies as well as a real world case study of inflow forecasting. References: Sharma, A., and R. Mehrotra (2014), An information theoretic alternative to model a natural system using observational information alone, Water Resources Research, 49, doi:10.1002/2013WR013845. Pande, S. (2005), Generalized local learning in water resource management, PhD dissertation, Utah State University, UT-USA, 148p.

  1. On the composition of an arbitrary collection of SU(2) spins: an enumerative combinatoric approach

    NASA Astrophysics Data System (ADS)

    Gyamfi, J. A.; Barone, V.

    2018-03-01

    The whole enterprise of spin compositions can be recast as simple enumerative combinatoric problems. We show here that enumerative combinatorics (Stanley 2011 Enumerative Combinatorics (Cambridge Studies in Advanced Mathematics vol 1) (Cambridge: Cambridge University Press)) is a natural setting for spin composition, and easily leads to very general analytic formulae—many of which hitherto not present in the literature. Based on it, we propose three general methods for computing spin multiplicities; namely, (1) the multi-restricted composition, (2) the generalized binomial and (3) the generating function methods. Symmetric and anti-symmetric compositions of SU(2) spins are also discussed, using generating functions. Of particular importance is the observation that while the common Clebsch-Gordan decomposition—which considers the spins as distinguishable—is related to integer compositions, the symmetric and anti-symmetric compositions (where one considers the spins as indistinguishable) are obtained considering integer partitions. The integers in question here are none other than the occupation numbers of the Holstein-Primakoff bosons. The pervasiveness of q-analogues in our approach is a testament to the fundamental role they play in spin compositions. In the appendix, some new results in the power series representation of Gaussian polynomials (or q-binomial coefficients)—relevant to symmetric and antisymmetric compositions—are presented.

  2. Development of novel metabolite-responsive transcription factors via transposon-mediated protein fusion.

    PubMed

    Younger, Andrew K D; Su, Peter Y; Shepard, Andrea J; Udani, Shreya V; Cybulski, Thaddeus R; Tyo, Keith E J; Leonard, Joshua N

    2018-02-01

    Naturally evolved metabolite-responsive biosensors enable applications in metabolic engineering, ranging from screening large genetic libraries to dynamically regulating biosynthetic pathways. However, there are many metabolites for which a natural biosensor does not exist. To address this need, we developed a general method for converting metabolite-binding proteins into metabolite-responsive transcription factors-Biosensor Engineering by Random Domain Insertion (BERDI). This approach takes advantage of an in vitro transposon insertion reaction to generate all possible insertions of a DNA-binding domain into a metabolite-binding protein, followed by fluorescence activated cell sorting to isolate functional biosensors. To develop and evaluate the BERDI method, we generated a library of candidate biosensors in which a zinc finger DNA-binding domain was inserted into maltose binding protein, which served as a model well-studied metabolite-binding protein. Library diversity was characterized by several methods, a selection scheme was deployed, and ultimately several distinct and functional maltose-responsive transcriptional biosensors were identified. We hypothesize that the BERDI method comprises a generalizable strategy that may ultimately be applied to convert a wide range of metabolite-binding proteins into novel biosensors for applications in metabolic engineering and synthetic biology. © The Author(s) 2018. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  3. The New Computers and Writing Course at the University of Texas at Austin: Context and Theory.

    ERIC Educational Resources Information Center

    Rouzie, Albert

    The new "Computers and Writing" course implemented by the division of rhetoric and composition at the University of Texas at Austin is an elective second-year writing course that satisfies the university's requirement for writing component courses. In this course, instructors and students generate and apply rhetorical terminology and…

  4. Bridging the Generation Gap: "Growing Golf" through an Action Learning Activity

    ERIC Educational Resources Information Center

    Elbert, Norb; Cumiskey, Kevin J.

    2014-01-01

    This paper describes an action learning simulation designed for a Professional Golf Management (PGM) program housed in a College of Business of a public university. The PGA Golf Management University Program, a 4.5- to 5-year college curriculum for aspiring PGA Professionals is offered at 19 PGA accredited universities nationwide. The program…

  5. Human Identities and Nation Building: Comparative Analysis, Markets, and the Modern University

    ERIC Educational Resources Information Center

    Callejo Pérez, David; Hernández Ulloa, Abel; Martínez Ruiz, Xicoténcatl

    2014-01-01

    The purpose of this article is to discuss the dilemma of the multi-university in sustainable education, research, and outreach by addressing some of the ways in which universities, must generate actions that seek to address these challenges, develop strategic relationships, and maximize their potential in the areas of teaching, research and…

  6. 40 CFR 261.5 - Special requirements for hazardous waste generated by conditionally exempt small quantity...

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... batteries managed under the requirements of 40 CFR part 266, subpart G; or (6) Is universal waste managed... waste prior to beneficial use or reuse, or legitimate recycling or reclamation; or (vii) For universal... waste prior to beneficial use or reuse, or legitimate recycling or reclamation; or (vii) For universal...

  7. 40 CFR 261.5 - Special requirements for hazardous waste generated by conditionally exempt small quantity...

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... batteries managed under the requirements of 40 CFR part 266, subpart G; or (6) Is universal waste managed... waste prior to beneficial use or reuse, or legitimate recycling or reclamation; or (vii) For universal... waste prior to beneficial use or reuse, or legitimate recycling or reclamation; or (vii) For universal...

  8. Cost Analysis and Overhead Charges at a Major Research University. AIR Forum 1982 Paper.

    ERIC Educational Resources Information Center

    Young, Michael E.; Geason, Ronald W.

    The development of a cost allocation model at Ohio State University is discussed. The model was designed to measure the direct, indirect, and total operating costs of university operations and to recover general fund overhead costs associated with unrestricted general fund support of auxiliary enterprises and revenue-generating activities. The…

  9. Sound Pressure Levels Measured in a University Concert Band: A Risk of Noise-Induced Hearing Loss?

    ERIC Educational Resources Information Center

    Holland, Nicholas V., III

    2008-01-01

    Researchers have reported public school band directors as experiencing noise-induced hearing loss. Little research has focused on collegiate band directors and university student musicians. The present study measures the sound pressure levels generated within a university concert band and compares sound levels with the criteria set by the…

  10. Data Mining of University Philanthropic Giving: Cluster-Discriminant Analysis and Pareto Effects

    ERIC Educational Resources Information Center

    Le Blanc, Louis A.; Rucks, Conway T.

    2009-01-01

    A large sample of 33,000 university alumni records were cluster-analyzed to generate six groups relatively unique in their respective attribute values. The attributes used to cluster the former students included average gift to the university's foundation and to the alumni association for the same institution. Cluster detection is useful in this…

  11. At the Intersection of Catholic and Mercy: There's an Elephant in the Room

    ERIC Educational Resources Information Center

    Snyder, Mary Hembrow; Edwards, Alice; McCarthy, Richard W.

    2014-01-01

    This article addresses apparent impasses between "Mercy" and "Catholic" identities in our colleges and universities. Each of the contributors represents a unique voice arising from her or his role and experience within the university community. All are grappling with the tension generated by the university's efforts to…

  12. Determining the "Essentials" for an Undergraduate Sustainability Degree Program: A Delphi Study at Dalhousie University

    ERIC Educational Resources Information Center

    Wright, Tarah S. A.; DeFields, Danielle

    2012-01-01

    Fostering a deep understanding of sustainability in students is critical in order to create a new generation of leaders. Universities have a significant role to play in this endeavour. Dalhousie University has recently developed the Environment, Sustainability and Society (ESS) program, which gives students the opportunity to study sustainability…

  13. Tensions in Higher Education Leadership: Towards a Multi-Level Model of Leadership Practice

    ERIC Educational Resources Information Center

    Bolden, Richard; Petrov, Georgy; Gosling, Jonathan

    2008-01-01

    UK higher education is undergoing a period of significant change that generates a series of tensions and difficulties for universities and university leaders. This paper explores these tensions through analysis of findings from a study comprising 152 semi-structured face-to-face interviews in 12 UK universities. Building on from theories of…

  14. Students' Use of Personal Technologies in the University Classroom: Analysing the Perceptions of the Digital Generation

    ERIC Educational Resources Information Center

    Langan, Debra; Schott, Nicole; Wykes, Timothy; Szeto, Justin; Kolpin, Samantha; Lopez, Carla; Smith, Nathan

    2016-01-01

    Faculty frequently express concerns about students' personal use of information and communication technologies in today's university classrooms. As a requirement of a graduate research methodology course in a university in Ontario, Canada, the authors conducted qualitative research to gain an in-depth understanding of students' perceptions of this…

  15. Designing Creative Spaces for Idea Generation and Start-Up Experiments: The Role of University Ecosystems

    ERIC Educational Resources Information Center

    Curley, Martin; Formica, Piero

    2013-01-01

    The role of universities is changing. In the last century the primary focus of universities was on education and research, with the key goals of creating and diffusing information and knowledge. A third and equally important role is now emerging, with its accompanying expectations and responsibilities -- that of value creation. "Value"…

  16. "You Need a System": Exploring the Role of Data in the Administration of University Students and Courses

    ERIC Educational Resources Information Center

    Selwyn, Neil; Henderson, Michael; Chao, Shu-Hua

    2018-01-01

    Universities generate a mass of data related to students and the courses that they study. As such, "data work" using digital technologies and digital systems is integral to educational administration within higher education. Drawing on in-depth interviews with administrative and managerial staff in an Australian university, this article…

  17. Strategic Planning in the Business Enterprise of Christian Colleges and Universities: A Multi-Case Study Approach

    ERIC Educational Resources Information Center

    Fletcher, Wayne Lewis

    2013-01-01

    Many tuition-driven private colleges and universities struggled for economic survival in the first decade of this millennium. The current study views higher education from a two-good framework that posits that every college and university provides teaching and service for the societal good while generating revenue from traditional business-like…

  18. Students Seeking Help for Mental Health Problems: Do Australian University Websites Provide Clear Pathways?

    ERIC Educational Resources Information Center

    Laws, Thomas A.; Fiedler, Brenton A.

    2013-01-01

    Mental health problems in young Australians continue to be a major public health issue. Studying at university can generate social pressures particularly for youth, which have been associated with the onset of a mental illness or a worsening of an existing condition. Many universities provide health services to support students with health…

  19. Generative Methodology: An Inquiry into How a University Can Acknowledge a Commitment to Its Aboriginal Community

    ERIC Educational Resources Information Center

    Harrison, Neil; Page, Susan; Finneran, Michelle

    2013-01-01

    This paper maps ethical and epistemological issues around attempts by a university to negotiate with the traditional custodians of the Sydney basin, the Darug, to facilitate the intergenerational transmission of knowledge within their community, and through the university curriculum. The theory and practice of research raised some important…

  20. 21 CFR 870.3630 - Pacemaker generator function analyzer.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Pacemaker generator function analyzer. 870.3630... (CONTINUED) MEDICAL DEVICES CARDIOVASCULAR DEVICES Cardiovascular Prosthetic Devices § 870.3630 Pacemaker generator function analyzer. (a) Identification. A pacemaker generator function analyzer is a device that is...

  1. 21 CFR 870.3630 - Pacemaker generator function analyzer.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Pacemaker generator function analyzer. 870.3630... (CONTINUED) MEDICAL DEVICES CARDIOVASCULAR DEVICES Cardiovascular Prosthetic Devices § 870.3630 Pacemaker generator function analyzer. (a) Identification. A pacemaker generator function analyzer is a device that is...

  2. 21 CFR 870.3630 - Pacemaker generator function analyzer.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Pacemaker generator function analyzer. 870.3630... (CONTINUED) MEDICAL DEVICES CARDIOVASCULAR DEVICES Cardiovascular Prosthetic Devices § 870.3630 Pacemaker generator function analyzer. (a) Identification. A pacemaker generator function analyzer is a device that is...

  3. 21 CFR 870.3630 - Pacemaker generator function analyzer.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 8 2012-04-01 2012-04-01 false Pacemaker generator function analyzer. 870.3630... (CONTINUED) MEDICAL DEVICES CARDIOVASCULAR DEVICES Cardiovascular Prosthetic Devices § 870.3630 Pacemaker generator function analyzer. (a) Identification. A pacemaker generator function analyzer is a device that is...

  4. Probability distribution functions in turbulent convection

    NASA Technical Reports Server (NTRS)

    Balachandar, S.; Sirovich, L.

    1991-01-01

    Results of an extensive investigation of probability distribution functions (pdfs) for Rayleigh-Benard convection, in hard turbulence regime, are presented. It is shown that the pdfs exhibit a high degree of internal universality. In certain cases this universality is established within two Kolmogorov scales of a boundary. A discussion of the factors leading to the universality is presented.

  5. Computational materials design of crystalline solids.

    PubMed

    Butler, Keith T; Frost, Jarvist M; Skelton, Jonathan M; Svane, Katrine L; Walsh, Aron

    2016-11-07

    The modelling of materials properties and processes from first principles is becoming sufficiently accurate as to facilitate the design and testing of new systems in silico. Computational materials science is both valuable and increasingly necessary for developing novel functional materials and composites that meet the requirements of next-generation technology. A range of simulation techniques are being developed and applied to problems related to materials for energy generation, storage and conversion including solar cells, nuclear reactors, batteries, fuel cells, and catalytic systems. Such techniques may combine crystal-structure prediction (global optimisation), data mining (materials informatics) and high-throughput screening with elements of machine learning. We explore the development process associated with computational materials design, from setting the requirements and descriptors to the development and testing of new materials. As a case study, we critically review progress in the fields of thermoelectrics and photovoltaics, including the simulation of lattice thermal conductivity and the search for Pb-free hybrid halide perovskites. Finally, a number of universal chemical-design principles are advanced.

  6. Grid Stiffened Structure Analysis Tool

    NASA Technical Reports Server (NTRS)

    1999-01-01

    The Grid Stiffened Analysis Tool contract is contract performed by Boeing under NASA purchase order H30249D. The contract calls for a "best effort" study comprised of two tasks: (1) Create documentation for a composite grid-stiffened structure analysis tool, in the form of a Microsoft EXCEL spread sheet, that was developed by originally at Stanford University and later further developed by the Air Force, and (2) Write a program that functions as a NASTRAN pre-processor to generate an FEM code for grid-stiffened structure. In performing this contract, Task 1 was given higher priority because it enables NASA to make efficient use of a unique tool they already have; Task 2 was proposed by Boeing because it also would be beneficial to the analysis of composite grid-stiffened structures, specifically in generating models for preliminary design studies. The contract is now complete, this package includes copies of the user's documentation for Task 1 and a CD ROM & diskette with an electronic copy of the user's documentation and an updated version of the "GRID 99" spreadsheet.

  7. Normalization and Implementation of Three Gravitational Acceleration Models

    NASA Technical Reports Server (NTRS)

    Eckman, Randy A.; Brown, Aaron J.; Adamo, Daniel R.; Gottlieb, Robert G.

    2016-01-01

    Unlike the uniform density spherical shell approximations of Newton, the consequence of spaceflight in the real universe is that gravitational fields are sensitive to the asphericity of their generating central bodies. The gravitational potential of an aspherical central body is typically resolved using spherical harmonic approximations. However, attempting to directly calculate the spherical harmonic approximations results in at least two singularities that must be removed to generalize the method and solve for any possible orbit, including polar orbits. Samuel Pines, Bill Lear, and Robert Gottlieb developed three unique algorithms to eliminate these singularities. This paper documents the methodical normalization of two of the three known formulations for singularity-free gravitational acceleration (namely, the Lear and Gottlieb algorithms) and formulates a general method for defining normalization parameters used to generate normalized Legendre polynomials and Associated Legendre Functions (ALFs) for any algorithm. A treatment of the conventional formulation of the gravitational potential and acceleration is also provided, in addition to a brief overview of the philosophical differences between the three known singularity-free algorithms.

  8. PyBoolNet: a python package for the generation, analysis and visualization of boolean networks.

    PubMed

    Klarner, Hannes; Streck, Adam; Siebert, Heike

    2017-03-01

    The goal of this project is to provide a simple interface to working with Boolean networks. Emphasis is put on easy access to a large number of common tasks including the generation and manipulation of networks, attractor and basin computation, model checking and trap space computation, execution of established graph algorithms as well as graph drawing and layouts. P y B ool N et is a Python package for working with Boolean networks that supports simple access to model checking via N u SMV, standard graph algorithms via N etwork X and visualization via dot . In addition, state of the art attractor computation exploiting P otassco ASP is implemented. The package is function-based and uses only native Python and N etwork X data types. https://github.com/hklarner/PyBoolNet. hannes.klarner@fu-berlin.de. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com

  9. Autologous blood cell therapies from pluripotent stem cells

    PubMed Central

    Lengerke, Claudia; Daley, George Q.

    2010-01-01

    Summary The discovery of human embryonic stem cells (hESCs) raised promises for a universal resource for cell based therapies in regenerative medicine. Recently, fast-paced progress has been made towards the generation of pluripotent stem cells (PSCs) amenable for clinical applications, culminating in reprogramming of adult somatic cells to autologous PSCs that can be indefinitely expanded in vitro. However, besides the efficient generation of bona fide, clinically safe PSCs (e.g. without the use of oncoproteins and gene transfer based on viruses inserting randomly into the genome), a major challenge in the field remains how to efficiently differentiate PSCs to specific lineages and how to select for cells that will function normally upon transplantation in adults. In this review, we analyse the in vitro differentiation potential of PSCs to the hematopoietic lineage discussing blood cell types that can be currently obtained, limitations in derivation of adult-type HSCs and prospects for clinical application of PSCs-derived blood cells. PMID:19910091

  10. One-channel Cell-attached Patch-clamp Recording

    PubMed Central

    Maki, Bruce A.; Cummings, Kirstie A.; Paganelli, Meaghan A.; Murthy, Swetha E.; Popescu, Gabriela K.

    2014-01-01

    Ion channel proteins are universal devices for fast communication across biological membranes. The temporal signature of the ionic flux they generate depends on properties intrinsic to each channel protein as well as the mechanism by which it is generated and controlled and represents an important area of current research. Information about the operational dynamics of ion channel proteins can be obtained by observing long stretches of current produced by a single molecule. Described here is a protocol for obtaining one-channel cell-attached patch-clamp current recordings for a ligand gated ion channel, the NMDA receptor, expressed heterologously in HEK293 cells or natively in cortical neurons. Also provided are instructions on how to adapt the method to other ion channels of interest by presenting the example of the mechano-sensitive channel PIEZO1. This method can provide data regarding the channel’s conductance properties and the temporal sequence of open-closed conformations that make up the channel’s activation mechanism, thus helping to understand their functions in health and disease. PMID:24961614

  11. FOST 2 Upgrade with Hollow-Fiber CTA FO Module and Generation of Osmotic Agent for Microorganism Growth Studies

    NASA Technical Reports Server (NTRS)

    Parodi, Jurek; Mangado, Jaione Romero; Stefanson, Ofir; Flynn, Michael; Shaw, Hali; Beeler, David

    2016-01-01

    FOST 2 is an integrated membrane system that incorporates a forward osmosis subsystem and a reverse osmosis subsystem working in series. It has been designed as a post treatment system to process the effluent from the Membrane Aerated Biological Reactor developed at NASA Johnson Space Center and Texas Tech University. Its function is to remove dissolved solids residual such as ammonia and suspended solids, as well as to provide a physical barrier to microbial and viral contamination. A tubular CTA membrane module from HTI and a flat-sheet lipid-base membrane module from Porifera were integrated and tested on FOST 2 in the past, using both a bioreactor's effluent and greywater as the feed solution. This paper documents the performance of FOST 2 after its upgrade with a hollow-fiber CTA membrane module from Toyobo, treating real black-water to generate the osmotic agent solution necessary to conduct growth studies of genetically engineered microorganism for the Synthetic Biological Membrane project.

  12. Reliability of III-V electronic devices -- the defects that cause the trouble

    NASA Astrophysics Data System (ADS)

    Pantelides, Sokrates T.

    2012-02-01

    Degradation of electronic devices by hot electrons is universally attributed to the generation of defects, but the mechanisms for defect generation and the specific nature of the pertinent defects are not known for most systems. Here we describe three recent case studies [1] in III-V high-electron-mobility transistors that illustrate the power of combining density functional calculations and experimental data to identify the pertinent defects and associated degradation mechanisms. In all cases, benign pre-existing defects are either depassivated (irreversible degradation) or transformed to a metastable state (reversible degradation). This work was done in collaboration with R.D. Schrimpf, D.M. Fleetwood, Y. Puzyrev, X. Shen, T. Roy, S. DasGupta, and B.R. Tuttle. Devices were provided by D.F. Brown, J. Speck and U. Mishra, and by J. Bergman and B. Brar. [4pt] [1] Y. S. Puzyrev et al., Appl. Phys. Lett. 96, 053505 (2010); T. Roy et al., Appl. Phys. Lett. 96, 133503 (2010); X. Shen et al., J. Appl. Phys. 108, 114505 (2010).

  13. Digital Poetry: A Narrow Relation between Poetics and the Codes of the Computational Logic

    NASA Astrophysics Data System (ADS)

    Laurentiz, Silvia

    The project "Percorrendo Escrituras" (Walking Through Writings Project) has been developed at ECA-USP Fine Arts Department. Summarizing, it intends to study different structures of digital information that share the same universe and are generators of a new aesthetics condition. The aim is to search which are the expressive possibilities of the computer among the algorithm functions and other of its specific properties. It is a practical, theoretical and interdisciplinary project where the study of programming evolutionary language, logic and mathematics take us to poetic experimentations. The focus of this research is the digital poetry, and it comes from poetics of permutation combinations and culminates with dynamic and complex systems, autonomous, multi-user and interactive, through agents generation derivations, filtration and emergent standards. This lecture will present artworks that use some mechanisms introduced by cybernetics and the notion of system in digital poetry that demonstrate the narrow relationship between poetics and the codes of computational logic.

  14. New activity pattern in human interactive dynamics

    NASA Astrophysics Data System (ADS)

    Formentin, Marco; Lovison, Alberto; Maritan, Amos; Zanzotto, Giovanni

    2015-09-01

    We investigate the response function of human agents as demonstrated by written correspondence, uncovering a new pattern for how the reactive dynamics of individuals is distributed across the set of each agent’s contacts. In long-term empirical data on email, we find that the set of response times considered separately for the messages to each different correspondent of a given writer, generate a family of heavy-tailed distributions, which have largely the same features for all agents, and whose characteristic times grow exponentially with the rank of each correspondent. We furthermore show that this new behavioral pattern emerges robustly by considering weighted moving averages of the priority-conditioned response-time probabilities generated by a basic prioritization model. Our findings clarify how the range of priorities in the inputs from one’s environment underpin and shape the dynamics of agents embedded in a net of reactive relations. These newly revealed activity patterns might be universal, being present in other general interactive environments, and constrain future models of communication and interaction networks, affecting their architecture and evolution.

  15. The First Stars in the Universe and Cosmic Reionization

    NASA Astrophysics Data System (ADS)

    Barkana, Rennan

    2006-08-01

    The earliest generation of stars, far from being a mere novelty, transformed the universe from darkness to light. The first atoms to form after the Big Bang filled the universe with atomic hydrogen and a few light elements. As gravity pulled gas clouds together, the first stars ignited and their radiation turned the surrounding atoms into ions. By looking at gas between us and distant galaxies, we know that this ionization eventually pervaded all space, so that few hydrogen atoms remain today between galaxies. Knowing exactly when and how it did so is a primary goal of cosmologists, because this would tell us when the early stars formed and in what kinds of galaxies. Although this ionization is beginning to be understood by using theoretical models and computer simulations, a new generation of telescopes is being built that will map atomic hydrogen throughout the universe.

  16. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Giorda, Paolo; Zanardi, Paolo; Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139

    We analyze the dynamical-algebraic approach to universal quantum control introduced in P. Zanardi and S. Lloyd, e-print quant-ph/0305013. The quantum state space H encoding information decomposes into irreducible sectors and subsystems associated with the group of available evolutions. If this group coincides with the unitary part of the group algebra CK of some group K then universal control is achievable over the K-irreducible components of H. This general strategy is applied to different kinds of bosonic systems. We first consider massive bosons in a double well and show how to achieve universal control over all finite-dimensional Fock sectors. We thenmore » discuss a multimode massless case giving the conditions for generating the whole infinite-dimensional multimode Heisenberg-Weyl enveloping algebra. Finally we show how to use an auxiliary bosonic mode coupled to finite-dimensional systems to generate high-order nonlinearities needed for universal control.« less

  17. Shape-programmable magnetic soft matter

    PubMed Central

    Lum, Guo Zhan; Ye, Zhou; Dong, Xiaoguang; Marvi, Hamid; Erin, Onder; Hu, Wenqi; Sitti, Metin

    2016-01-01

    Shape-programmable matter is a class of active materials whose geometry can be controlled to potentially achieve mechanical functionalities beyond those of traditional machines. Among these materials, magnetically actuated matter is particularly promising for achieving complex time-varying shapes at small scale (overall dimensions smaller than 1 cm). However, previous work can only program these materials for limited applications, as they rely solely on human intuition to approximate the required magnetization profile and actuating magnetic fields for their materials. Here, we propose a universal programming methodology that can automatically generate the required magnetization profile and actuating fields for soft matter to achieve new time-varying shapes. The universality of the proposed method can therefore inspire a vast number of miniature soft devices that are critical in robotics, smart engineering surfaces and materials, and biomedical devices. Our proposed method includes theoretical formulations, computational strategies, and fabrication procedures for programming magnetic soft matter. The presented theory and computational method are universal for programming 2D or 3D time-varying shapes, whereas the fabrication technique is generic only for creating planar beams. Based on the proposed programming method, we created a jellyfish-like robot, a spermatozoid-like undulating swimmer, and an artificial cilium that could mimic the complex beating patterns of its biological counterpart. PMID:27671658

  18. Shape-programmable magnetic soft matter.

    PubMed

    Lum, Guo Zhan; Ye, Zhou; Dong, Xiaoguang; Marvi, Hamid; Erin, Onder; Hu, Wenqi; Sitti, Metin

    2016-10-11

    Shape-programmable matter is a class of active materials whose geometry can be controlled to potentially achieve mechanical functionalities beyond those of traditional machines. Among these materials, magnetically actuated matter is particularly promising for achieving complex time-varying shapes at small scale (overall dimensions smaller than 1 cm). However, previous work can only program these materials for limited applications, as they rely solely on human intuition to approximate the required magnetization profile and actuating magnetic fields for their materials. Here, we propose a universal programming methodology that can automatically generate the required magnetization profile and actuating fields for soft matter to achieve new time-varying shapes. The universality of the proposed method can therefore inspire a vast number of miniature soft devices that are critical in robotics, smart engineering surfaces and materials, and biomedical devices. Our proposed method includes theoretical formulations, computational strategies, and fabrication procedures for programming magnetic soft matter. The presented theory and computational method are universal for programming 2D or 3D time-varying shapes, whereas the fabrication technique is generic only for creating planar beams. Based on the proposed programming method, we created a jellyfish-like robot, a spermatozoid-like undulating swimmer, and an artificial cilium that could mimic the complex beating patterns of its biological counterpart.

  19. Shape-programmable magnetic soft matter

    NASA Astrophysics Data System (ADS)

    Zhan Lum, Guo; Ye, Zhou; Dong, Xiaoguang; Marvi, Hamid; Erin, Onder; Hu, Wenqi; Sitti, Metin

    2016-10-01

    Shape-programmable matter is a class of active materials whose geometry can be controlled to potentially achieve mechanical functionalities beyond those of traditional machines. Among these materials, magnetically actuated matter is particularly promising for achieving complex time-varying shapes at small scale (overall dimensions smaller than 1 cm). However, previous work can only program these materials for limited applications, as they rely solely on human intuition to approximate the required magnetization profile and actuating magnetic fields for their materials. Here, we propose a universal programming methodology that can automatically generate the required magnetization profile and actuating fields for soft matter to achieve new time-varying shapes. The universality of the proposed method can therefore inspire a vast number of miniature soft devices that are critical in robotics, smart engineering surfaces and materials, and biomedical devices. Our proposed method includes theoretical formulations, computational strategies, and fabrication procedures for programming magnetic soft matter. The presented theory and computational method are universal for programming 2D or 3D time-varying shapes, whereas the fabrication technique is generic only for creating planar beams. Based on the proposed programming method, we created a jellyfish-like robot, a spermatozoid-like undulating swimmer, and an artificial cilium that could mimic the complex beating patterns of its biological counterpart.

  20. Applying Computerized-Scoring Models of Written Biological Explanations across Courses and Colleges: Prospects and Limitations

    PubMed Central

    Ha, Minsu; Nehm, Ross H.; Urban-Lurain, Mark; Merrill, John E.

    2011-01-01

    Our study explored the prospects and limitations of using machine-learning software to score introductory biology students’ written explanations of evolutionary change. We investigated three research questions: 1) Do scoring models built using student responses at one university function effectively at another university? 2) How many human-scored student responses are needed to build scoring models suitable for cross-institutional application? 3) What factors limit computer-scoring efficacy, and how can these factors be mitigated? To answer these questions, two biology experts scored a corpus of 2556 short-answer explanations (from biology majors and nonmajors) at two universities for the presence or absence of five key concepts of evolution. Human- and computer-generated scores were compared using kappa agreement statistics. We found that machine-learning software was capable in most cases of accurately evaluating the degree of scientific sophistication in undergraduate majors’ and nonmajors’ written explanations of evolutionary change. In cases in which the software did not perform at the benchmark of “near-perfect” agreement (kappa > 0.80), we located the causes of poor performance and identified a series of strategies for their mitigation. Machine-learning software holds promise as an assessment tool for use in undergraduate biology education, but like most assessment tools, it is also characterized by limitations. PMID:22135372

  1. Applying computerized-scoring models of written biological explanations across courses and colleges: prospects and limitations.

    PubMed

    Ha, Minsu; Nehm, Ross H; Urban-Lurain, Mark; Merrill, John E

    2011-01-01

    Our study explored the prospects and limitations of using machine-learning software to score introductory biology students' written explanations of evolutionary change. We investigated three research questions: 1) Do scoring models built using student responses at one university function effectively at another university? 2) How many human-scored student responses are needed to build scoring models suitable for cross-institutional application? 3) What factors limit computer-scoring efficacy, and how can these factors be mitigated? To answer these questions, two biology experts scored a corpus of 2556 short-answer explanations (from biology majors and nonmajors) at two universities for the presence or absence of five key concepts of evolution. Human- and computer-generated scores were compared using kappa agreement statistics. We found that machine-learning software was capable in most cases of accurately evaluating the degree of scientific sophistication in undergraduate majors' and nonmajors' written explanations of evolutionary change. In cases in which the software did not perform at the benchmark of "near-perfect" agreement (kappa > 0.80), we located the causes of poor performance and identified a series of strategies for their mitigation. Machine-learning software holds promise as an assessment tool for use in undergraduate biology education, but like most assessment tools, it is also characterized by limitations.

  2. Mind as Space

    NASA Astrophysics Data System (ADS)

    McKinstry, Chris

    The present article describes a possible method for the automatic discovery of a universal human semantic-affective hyperspatial approximation of the human subcognitive substrate - the associative network which French (1990) asserts is the ultimate foundation of the human ability to pass the Turing Test - that does not require a machine to have direct human experience or a physical human body. This method involves automatic programming - such as Koza's genetic programming (1992) - guided in the discovery of the proposed universal hypergeometry by feedback from a Minimum Intelligent Signal Test or MIST (McKinstry, 1997) constructed from a very large number of human validated probabilistic propositions collected from a large population of Internet users. It will be argued that though a lifetime of human experience is required to pass a rigorous Turing Test, a probabilistic propositional approximation of this experience can be constructed via public participation on the Internet, and then used as a fitness function to direct the artificial evolution of a universal hypergeometry capable of classifying arbitrary propositions. A model of this hypergeometry will be presented; it predicts Miller's "Magical Number Seven" (1956) as the size of human short-term memory from fundamental hypergeometric properties. A system that can lead to the generation of novel propositions or "artificial thoughts" will also be described.

  3. Universality in a Neutral Evolution Model

    NASA Astrophysics Data System (ADS)

    King, Dawn; Scott, Adam; Maric, Nevena; Bahar, Sonya

    2013-03-01

    Agent-based models are ideal for investigating the complex problems of biodiversity and speciation because they allow for complex interactions between individuals and between individuals and the environment. Presented here is a ``null'' model that investigates three mating types - assortative, bacterial, and random - in phenotype space, as a function of the percentage of random death δ. Previous work has shown phase transition behavior in an assortative mating model with variable fitness landscapes as the maximum mutation size (μ) was varied (Dees and Bahar, 2010). Similarly, this behavior was recently presented in the work of Scott et al. (submitted), on a completely neutral landscape, for bacterial-like fission as well as for assortative mating. Here, in order to achieve an appropriate ``null'' hypothesis, the random death process was changed so each individual, in each generation, has the same probability of death. Results show a continuous nonequilibrium phase transition for the order parameters of the population size and the number of clusters (analogue of species) as δ is varied for three different mutation sizes of the system. The system shows increasing robustness as μ increases. Universality classes and percolation properties of this system are also explored. This research was supported by funding from: University of Missouri Research Board and James S. McDonnell Foundation

  4. Administrative Manual. Ouachita Baptist University, July 1975.

    ERIC Educational Resources Information Center

    Ouachita Baptist Univ., ARadelphia, AR.

    The July 1975 edition of this handbook is divided into main sections on the university itself, governance and policies, and current procedures. Specific policies described include those dealing with the organization and function of the Board of Trustees; administrative organization and function; faculty organization and function; faculty rights,…

  5. MetaPro-IQ: a universal metaproteomic approach to studying human and mouse gut microbiota.

    PubMed

    Zhang, Xu; Ning, Zhibin; Mayne, Janice; Moore, Jasmine I; Li, Jennifer; Butcher, James; Deeke, Shelley Ann; Chen, Rui; Chiang, Cheng-Kang; Wen, Ming; Mack, David; Stintzi, Alain; Figeys, Daniel

    2016-06-24

    The gut microbiota has been shown to be closely associated with human health and disease. While next-generation sequencing can be readily used to profile the microbiota taxonomy and metabolic potential, metaproteomics is better suited for deciphering microbial biological activities. However, the application of gut metaproteomics has largely been limited due to the low efficiency of protein identification. Thus, a high-performance and easy-to-implement gut metaproteomic approach is required. In this study, we developed a high-performance and universal workflow for gut metaproteome identification and quantification (named MetaPro-IQ) by using the close-to-complete human or mouse gut microbial gene catalog as database and an iterative database search strategy. An average of 38 and 33 % of the acquired tandem mass spectrometry (MS) spectra was confidently identified for the studied mouse stool and human mucosal-luminal interface samples, respectively. In total, we accurately quantified 30,749 protein groups for the mouse metaproteome and 19,011 protein groups for the human metaproteome. Moreover, the MetaPro-IQ approach enabled comparable identifications with the matched metagenome database search strategy that is widely used but needs prior metagenomic sequencing. The response of gut microbiota to high-fat diet in mice was then assessed, which showed distinct metaproteome patterns for high-fat-fed mice and identified 849 proteins as significant responders to high-fat feeding in comparison to low-fat feeding. We present MetaPro-IQ, a metaproteomic approach for highly efficient intestinal microbial protein identification and quantification, which functions as a universal workflow for metaproteomic studies, and will thus facilitate the application of metaproteomics for better understanding the functions of gut microbiota in health and disease.

  6. Universal functions of nuclear proximity potential for Skyrme nucleus-nucleus interaction in a semiclassical approach

    NASA Astrophysics Data System (ADS)

    Gupta, Raj K.; Singh, Dalip; Kumar, Raj; Greiner, Walter

    2009-07-01

    The universal function of the nuclear proximity potential is obtained for the Skyrme nucleus-nucleus interaction in the semiclassical extended Thomas-Fermi (ETF) approach. This is obtained as a sum of the spin-orbit-density-independent and spin-orbit-density-dependent parts of the Hamiltonian density, since the two terms behave differently, the spin-orbit-density-independent part mainly attractive and the spin-orbit-density-dependent part mainly repulsive. The semiclassical expansions of kinetic energy density and spin-orbit density are allowed up to second order, and the two-parameter Fermi density, with its parameters fitted to experiments, is used for the nuclear density. The universal functions or the resulting nuclear proximity potential reproduce the 'exact' Skyrme nucleus-nucleus interaction potential in the semiclassical approach, within less than ~1 MeV of difference, both at the maximum attraction and in the surface region. An application of the resulting interaction potential to fusion excitation functions shows clearly that the parameterized universal functions of nuclear proximity potential substitute completely the 'exact' potential in the Skyrme energy density formalism based on the semiclassical ETF method, including also the modifications of interaction barriers at sub-barrier energies in terms of modifying the constants of the universal functions.

  7. First Generation College Students: Indicators of College Persistence and Graduation

    ERIC Educational Resources Information Center

    Moore, Angelica

    2013-01-01

    First generation college students are accessing colleges and universities at an increased rate. However, first generation college students, which include a disproportionate number of minorities and low income populations, continue to lag behind their counterparts in graduating from college. More prevalent in the research are factors that cause…

  8. Generating OER by Recording Lectures: A Case Study

    ERIC Educational Resources Information Center

    Llamas-Nistal, Martín; Mikic-Fonte, Fernando A.

    2014-01-01

    The University of Vigo, Vigo, Spain, has the objective of making all the teaching material generated by its teachers freely available. To attain this objective, it encourages the development of Open Educational Resources, especially videos. This paper presents an experience of recording lectures and generating the corresponding videos as a step…

  9. Generative Research on Second Language Acquisition.

    ERIC Educational Resources Information Center

    Eubank, Lynn

    1995-01-01

    Reviews recent trends in generative research on second language acquisition, focusing on the role of universal grammar, parameter resetting, and anaphoric binding. An annotated bibliography discusses five important works in the field. (61 references) (MDM)

  10. Quantum computing without wavefunctions: time-dependent density functional theory for universal quantum computation.

    PubMed

    Tempel, David G; Aspuru-Guzik, Alán

    2012-01-01

    We prove that the theorems of TDDFT can be extended to a class of qubit Hamiltonians that are universal for quantum computation. The theorems of TDDFT applied to universal Hamiltonians imply that single-qubit expectation values can be used as the basic variables in quantum computation and information theory, rather than wavefunctions. From a practical standpoint this opens the possibility of approximating observables of interest in quantum computations directly in terms of single-qubit quantities (i.e. as density functionals). Additionally, we also demonstrate that TDDFT provides an exact prescription for simulating universal Hamiltonians with other universal Hamiltonians that have different, and possibly easier-to-realize two-qubit interactions. This establishes the foundations of TDDFT for quantum computation and opens the possibility of developing density functionals for use in quantum algorithms.

  11. Sentence processing in the cerebral cortex.

    PubMed

    Sakai, K L; Hashimoto, R; Homae, F

    2001-01-01

    Human language is a unique faculty of the mind. It has been the ultimate mystery throughout the history of neuroscience. Despite many aphasia and functional imaging studies, the exact correlation between cortical language areas and subcomponents of the linguistic system has not been established. One notable drawback is that most functional imaging studies have tested language tasks at the word level, such as lexical decision and word generation tasks, thereby neglecting the syntactic aspects of the language faculty. As proposed by Chomsky, the critical knowledge of language involves universal grammar (UG), which governs the syntactic structure of sentences. In this article, we will review recent advances made by functional neuroimaging studies of language, focusing especially on sentence processing in the cerebral cortex. We also present the recent results of our functional magnetic resonance imaging (fMRI) study intended to identify cortical areas specifically involved in syntactic processing. A study of sentence processing that employs a newly developed technique, optical topography (OT), is also presented. Based on these findings, we propose a modular specialization of Broca's area, Wernicke's area, and the angular gyrus/supramarginal gyrus. The current direction of research in neuroscience is beginning to establish the existence of distinct modules responsible for our knowledge of language.

  12. Age-Related Differences and Heterogeneity in Executive Functions: Analysis of NAB Executive Functions Module Scores.

    PubMed

    Buczylowska, Dorota; Petermann, Franz

    2016-05-01

    Normative data from the German adaptation of the Neuropsychological Assessment Battery were used to examine age-related differences in 6 executive function tasks. A multivariate analysis of variance was employed to investigate the differences in performance in 484 participants aged 18-99 years. The coefficient of variation was calculated to compare the heterogeneity of scores between 10 age groups. Analyses showed an increase in the dispersion of scores with age, varying from 7% to 289%, in all subtests. Furthermore, age-dependent heterogeneity appeared to be associated with age-dependent decline because the subtests with the greatest increase in dispersion (i.e., Mazes, Planning, and Categories) also exhibited the greatest decrease in mean scores. In contrast, scores for the subtests Letter Fluency, Word Generation, and Judgment had the lowest increase in dispersion with the lowest decrease in mean scores. Consequently, the results presented here show a pattern of age-related differences in executive functioning that is consistent with the concept of crystallized and fluid intelligence. © The Author 2016. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  13. Green Power Partnership Top 30 College & University

    EPA Pesticide Factsheets

    The U.S. EPA's Green Power Partnership is a voluntary program designed to reduce the environmental impact of electricity generation by promoting renewable energy. The Top 30 College & University list details the largest higher ed green power users in GPP.

  14. Oral Discourse Generated through Peer Interaction While Completing Communicative Tasks in an EFL Classroom

    ERIC Educational Resources Information Center

    Tulung, Golda J.

    2013-01-01

    Drawing on qualitative observation data from a case study of an EFL classroom for pre-medical students in an Indonesian university, this article examines the oral discourse generated through peer interaction while completing two types of communicative tasks in terms of how much language was generated, including the amount of the L2 generated and…

  15. Why Calcium? How Calcium Became the Best Communicator*

    PubMed Central

    Carafoli, Ernesto; Krebs, Joachim

    2016-01-01

    Calcium carries messages to virtually all important functions of cells. Although it was already active in unicellular organisms, its role became universally important after the transition to multicellular life. In this Minireview, we explore how calcium ended up in this privileged position. Most likely its unique coordination chemistry was a decisive factor as it makes its binding by complex molecules particularly easy even in the presence of large excesses of other cations, e.g. magnesium. Its free concentration within cells can thus be maintained at the very low levels demanded by the signaling function. A large cadre of proteins has evolved to bind or transport calcium. They all contribute to buffer it within cells, but a number of them also decode its message for the benefit of the target. The most important of these “calcium sensors” are the EF-hand proteins. Calcium is an ambivalent messenger. Although essential to the correct functioning of cell processes, if not carefully controlled spatially and temporally within cells, it generates variously severe cell dysfunctions, and even cell death. PMID:27462077

  16. LDlink: a web-based application for exploring population-specific haplotype structure and linking correlated alleles of possible functional variants.

    PubMed

    Machiela, Mitchell J; Chanock, Stephen J

    2015-11-01

    Assessing linkage disequilibrium (LD) across ancestral populations is a powerful approach for investigating population-specific genetic structure as well as functionally mapping regions of disease susceptibility. Here, we present LDlink, a web-based collection of bioinformatic modules that query single nucleotide polymorphisms (SNPs) in population groups of interest to generate haplotype tables and interactive plots. Modules are designed with an emphasis on ease of use, query flexibility, and interactive visualization of results. Phase 3 haplotype data from the 1000 Genomes Project are referenced for calculating pairwise metrics of LD, searching for proxies in high LD, and enumerating all observed haplotypes. LDlink is tailored for investigators interested in mapping common and uncommon disease susceptibility loci by focusing on output linking correlated alleles and highlighting putative functional variants. LDlink is a free and publically available web tool which can be accessed at http://analysistools.nci.nih.gov/LDlink/. mitchell.machiela@nih.gov. Published by Oxford University Press 2015. This work is written by US Government employees and is in the public domain in the US.

  17. Electrokinetic Response of Charge-Selective Nanostructured Polymeric Membranes

    NASA Astrophysics Data System (ADS)

    Schiffbauer, Jarrod; Li, Diya; Gao, Feng; Phillip, William; Chang, Hsueh-Chia

    2017-11-01

    Nanostructured polymeric membranes, with a tunable pore size and ease of surface molecular functionalization, are a promising material for separations, filtration, and sensing applications. Recently, such membranes have been fabricated wherein the ion selectivity is imparted by self-assembled functional groups through a two-step process. Amine groups are used to provide a positive surface charge and acid groups are used to yield a negative charge. The membranes can be fabricated as either singly-charged or patterned/mosaic membranes, where there are alternating regions of amine- lined or acid-lined pores. We demonstrate that such membranes, in addition to having many features in common with other charge selective membranes (i.e. AMX or Nafion), display a unique single-membrane rectification behavior. This is due to the asymmetric distribution of charged functional groups during the fabrication process. We demonstrate this rectification effect using both dc current-voltage characteristics as well as dc-biased electrical impedance spectroscopy. Furthermore, surface charge changes due to dc concentration polarization and generation of localized pH shifts are monitored using electrical impedance spectroscopy. (formerly at University of Notre Dame).

  18. Why Calcium? How Calcium Became the Best Communicator.

    PubMed

    Carafoli, Ernesto; Krebs, Joachim

    2016-09-30

    Calcium carries messages to virtually all important functions of cells. Although it was already active in unicellular organisms, its role became universally important after the transition to multicellular life. In this Minireview, we explore how calcium ended up in this privileged position. Most likely its unique coordination chemistry was a decisive factor as it makes its binding by complex molecules particularly easy even in the presence of large excesses of other cations, e.g. magnesium. Its free concentration within cells can thus be maintained at the very low levels demanded by the signaling function. A large cadre of proteins has evolved to bind or transport calcium. They all contribute to buffer it within cells, but a number of them also decode its message for the benefit of the target. The most important of these "calcium sensors" are the EF-hand proteins. Calcium is an ambivalent messenger. Although essential to the correct functioning of cell processes, if not carefully controlled spatially and temporally within cells, it generates variously severe cell dysfunctions, and even cell death. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

  19. Analysis of Factors Enhancing Pitfall in Research and Teaching of the Nigerian University System

    ERIC Educational Resources Information Center

    Ahmed, Tafida; Umar, Kasim; Paul, Chima

    2015-01-01

    The paper analyses factors enhancing pitfall in research and teaching in the Nigerian university system. Using data generated from secondary sources, it was found that so many factors are responsible for the constant decay in teaching and research in the Nigerian universities. The paper however found from literature that the high rate of pitfalls…

  20. Rethinking Universal Service for a Next Generation Network Environment. OECD Digital Economy Papers, No. 113

    ERIC Educational Resources Information Center

    Xavier, Patrick

    2006-01-01

    There is a clear need, in view of significant competitive, technological and service changes taking place in the telecommunications sector, to review universal service obligations, their coverage, how they are financed and who is responsible for providing them. In many OECD countries, a primary longer term issue is how to provide universal service…

Top