SWIFT Observations of a Far UV Luminosity Component in SS433

NASA Technical Reports Server (NTRS)

Cannizzo, J. K.; Boyd, P. T.; Dolan, J. F.

2007-01-01

SS433 is a binary system showing relativistic Doppler shifts in its two sets of emission lines. The origin of its UV continuum is not well established. We observed SS433 to determine the emission mechanism responsible for its far UV spectrum. The source was observed at several different phases of both its 13 d orbital period and 162.5 d precession period using the UVOT and XRT detector systems on Swift. The far UV spectrum down to 1880 Angstrom lies significantly above the spectral flux distribution predicted by extrapolating the reddened blackbody continuum that fits the spectrum above 3500 Angstroms. The intensity of the far UV flux varies over a period of days and the variability is correlated with the variability of the soft X-ray flux from the source. An emission mechanism in addition to those previously detected in the optical and X-ray regions must exist in the far UV spectrum of SS433.

High-throughput technology for novel SO2 oxidation catalysts

PubMed Central

Loskyll, Jonas; Stoewe, Klaus; Maier, Wilhelm F

2011-01-01

We review the state of the art and explain the need for better SO2 oxidation catalysts for the production of sulfuric acid. A high-throughput technology has been developed for the study of potential catalysts in the oxidation of SO2 to SO3. High-throughput methods are reviewed and the problems encountered with their adaptation to the corrosive conditions of SO2 oxidation are described. We show that while emissivity-corrected infrared thermography (ecIRT) can be used for primary screening, it is prone to errors because of the large variations in the emissivity of the catalyst surface. UV-visible (UV-Vis) spectrometry was selected instead as a reliable analysis method of monitoring the SO2 conversion. Installing plain sugar absorbents at reactor outlets proved valuable for the detection and quantitative removal of SO3 from the product gas before the UV-Vis analysis. We also overview some elements used for prescreening and those remaining after the screening of the first catalyst generations. PMID:27877427

A Rare Encounter with Very Massive Stars in NGC~3125-A1

NASA Astrophysics Data System (ADS)

Wofford, A.; Leitherer, C.; Chandar, R.; Bouret, J. C.

2014-09-01

Super star cluster A1 in the nearby starburst galaxy NGC~3125 shows broad He II λ1640 emission (FWHM ~ 1200 km/s) of unprecedented strength (equivalent width, EW = 7.1+/-0.4 angstroms). Previous attempts to characterize A1's massive star content were hampered by the low resolution of the UV spectrum and the lack of co-spatial panchromatic data. We obtained far-UV to near-IR spectroscopy of the two principal emitting regions in the galaxy with the Space Telescope Imaging Spectrograph and the Cosmic Origins Spectrograph on board the Hubble Space Telescope. We use these data to derive the ages, reddenings, masses, and Wolf-Rayet (WR) to O star ratios of three compact clusters in the galaxy. We rule out that the extraordinary HeII lambda 1640 emission and OV lambda 1371 absorption in A1 are due to an extremely flat upper Initial Mass Function (IMF), and suggest that they originate in the winds of Very Massive Stars ( > 120 Msun, VMS). In order to reproduce the properties of peculiar clusters such as A1, the stellar evolution tracks implemented in Starburst99 need to be extended to masses >120 Msun.

The ultraviolet view of the Magellanic Clouds from GALEX: A first look at the LMC source catalog

NASA Astrophysics Data System (ADS)

Simons, Raymond; Thilker, David; Bianchi, Luciana; Wyder, Ted

2014-03-01

The Galaxy Evolution Exporer (GALEX) has performed unprecedented imaging surveys of the Magellanic Clouds (MC) and their surrounding areas including the Magellanic Bridge (MB) in near-UV (NUV, 1771-2831 Å) and far-UV (FUV, 1344-1786 Å) bands at 5″ resolution. Substantially more area was covered in the NUV than FUV, particularly in the bright central regions, because of the GALEX FUV detector failure. The 5σ depth of the NUV imaging varies between 20.8 and 22.7 (ABmag). Such imaging provides the first sensitive view of the entire content of hot stars in the Magellanic System, revealing the presence of young populations even in sites with extremely low star-formation rate surface density like the MB, owing to high sensitivity of the UV data to hot stars and the dark sky at these wavelengths. The density of UV sources is quite high in many areas of the LMC and SMC. Crowding limits the quality of source detection and photometry from the standard mission pipeline processing. We performed custom-photometry of the GALEX data in the MC survey region (<15° from the LMC, <10° from the SMC). After merging multiple detections of sources in overlapping images, the resulting catalog we have produced for the LMC contains nearly six million unique NUV point sources within 15° and is briefly presented herein. This paper provides a first look at the GALEX MC survey and highlights some of the science investigations that the entire catalog and imaging dataset will make possible.

Multilength Scale Patterning of Functional Layers by Roll-to-Roll Ultraviolet-Light-Assisted Nanoimprint Lithography.

PubMed

Leitgeb, Markus; Nees, Dieter; Ruttloff, Stephan; Palfinger, Ursula; Götz, Johannes; Liska, Robert; Belegratis, Maria R; Stadlober, Barbara

2016-05-24

Top-down fabrication of nanostructures with high throughput is still a challenge. We demonstrate the fast (>10 m/min) and continuous fabrication of multilength scale structures by roll-to-roll UV-nanoimprint lithography on a 250 mm wide web. The large-area nanopatterning is enabled by a multicomponent UV-curable resist system (JRcure) with viscous, mechanical, and surface properties that are tunable over a wide range to either allow for usage as polymer stamp material or as imprint resist. The adjustable elasticity and surface chemistry of the resist system enable multistep self-replication of structured resist layers. Decisive for defect-free UV-nanoimprinting in roll-to-roll is the minimization of the surface energies of stamp and resist, and the stepwise reduction of the stiffness from one layer to the next is essential for optimizing the reproduction fidelity especially for nanoscale features. Accordingly, we demonstrate the continuous replication of 3D nanostructures and the high-throughput fabrication of multilength scale resist structures resulting in flexible polyethylenetherephtalate film rolls with superhydrophobic properties. Moreover, a water-soluble UV-imprint resist (JRlift) is introduced that enables residue-free nanoimprinting in roll-to-roll. Thereby we could demonstrate high-throughput fabrication of metallic patterns with only 200 nm line width.

Arabidopsis FHY3 and HY5 Positively Mediate Induction of COP1 Transcription in Response to Photomorphogenic UV-B Light[C][W][OA

PubMed Central

Huang, Xi; Ouyang, Xinhao; Yang, Panyu; Lau, On Sun; Li, Gang; Li, Jigang; Chen, Haodong; Deng, Xing Wang

2012-01-01

As sessile organisms, higher plants have evolved the capacity to sense and interpret diverse light signals to modulate their development. In Arabidopsis thaliana, low-intensity and long-wavelength UV-B light is perceived as an informational signal to mediate UV-B–induced photomorphogenesis. Here, we report that the multifunctional E3 ubiquitin ligase, CONSTITUTIVE PHOTOMORPHOGENESIS1 (COP1), a known key player in UV-B photomorphogenic responses, is also a UV-B–inducible gene. Two transcription factors, FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and ELONGATED HYPOCOTYL5 (HY5), directly bind to distinct regulatory elements within the COP1 promoter, which are essential for the induction of the COP1 gene mediated by photomorphogenic UV-B signaling. Absence of FHY3 results in impaired UV-B–induced hypocotyl growth and reduced tolerance against damaging UV-B. Thus, FHY3 positively regulates UV-B–induced photomorphogenesis by directly activating COP1 transcription, while HY5 promotes COP1 expression via a positive feedback loop. Furthermore, FHY3 and HY5 physically interact with each other, and this interaction is diminished by UV-B. Together, our findings reveal that COP1 gene expression in response to photomorphogenic UV-B is controlled by a combinatorial regulation of FHY3 and HY5, and this UV-B–specific working mode of FHY3 and HY5 is distinct from that in far-red light and circadian conditions. PMID:23150635

The UV Survey Mission Concept, CETUS

NASA Astrophysics Data System (ADS)

Heap, Sara; and the CETUS Team

2018-01-01

In March 2017, NASA selected CETUS for study of a Probe-class mission concept. W. Danchi is the CETUS PI, and S. Heap is the Science PI. CETUS is primarily a UV survey telescope to complement survey telescopes of the 2020’s including E-ROSITA, Subaru Hyper Suprime Cam and Prime-Focus Spectrograph, WFIRST, and the Square Kilometer Array. CETUS comprises a 1.5-m wide-field telescope and three science instruments: a wide-field (1045” on a side) far-UV and near-UV camera; a similarly wide-field near-UV multi-object spectrograph utilizing a next-generation micro-shutter array; and a single-object spectrograph with options of spectral region (far-UV or near-UV) and spectral resolving power (2,000 or 40,000). The survey instruments will operate simultaneously thereby producing wide-field images in the near-UV and far-UV and a spectrogram containing near-UV spectra of up to 100 sources free of spectral overlap and astronomical background. ln concert with other survey telescopes, CETUS will focus on understanding galaxy evolution at cosmic noon (z~1-2).

Far-UV Spectral Mapping of Lunar Composition, Porosity, and Space Weathering: LRO Lyman Alpha Mapping Project (LAMP)

NASA Astrophysics Data System (ADS)

Retherford, K. D.; Greathouse, T. K.; Mandt, K.; Gladstone, R.; Liu, Y.; Hendrix, A. R.; Hurley, D.; Cahill, J. T.; Stickle, A. M.; Egan, A.; Kaufmann, D. E.; Grava, C.; Pryor, W. R.

2016-12-01

Far ultraviolet reflectance measurements of the Moon, icy satellites, comets, and asteroids obtained within the last decade have ushered in a new era of scientific advancement for UV surface investigations. The Lunar Reconnaissance Orbiter (LRO) Lyman Alpha Mapping Project (LAMP) has demonstrated an innovative nightside observing technique, putting a new light on permanently shadowed regions (PSRs) and other features on the Moon. Dayside far-UV albedo maps complement the nightside data, and LRO's polar orbit and high data downlink capabilities enable searches for diurnal variations in spectral signals. We'll discuss the strengths of the far-UV reflectance imaging spectroscopy technique with respect to several new LAMP results. Detections of water frost and hydration signatures near 165 nm, for example, provide constraints on composition that complement infrared spectroscopy, visible imaging, neutron spectroscopy, radar, and other techniques. At far-UV wavelengths a relatively blue spectral slope is diagnostic of space weathering, which is opposite of the spectral reddening indicator of maturity at wavelengths longward of 180 nm. By utilizing natural diffuse illumination sources on the nightside the far-UV technique is able to identify relative increases in porosity within the PSRs, and provides an additional tool for determining relative surface ages. Prospects for future studies are further enabled by a new, more sensitive dayside operating mode enacted during the present LRO mission extension.

The Diffuse Radiation Field at High Galactic Latitudes

NASA Astrophysics Data System (ADS)

Akshaya, M. S.; Murthy, Jayant; Ravichandran, S.; Henry, R. C.; Overduin, James

2018-05-01

We have used GALEX observations of the north and south Galactic poles to study the diffuse ultraviolet background at locations where the Galactic light is expected to be at a minimum. We find offsets of 230–290 photon units in the far-UV (1531 Å) and 480–580 photon units in the near-UV (2361 Å). Of this, approximately 120 photon units can be ascribed to dust-scattered light and another 110 photon units (190 in the near-UV) to extragalactic radiation. The remaining radiation is, as yet, unidentified and amounts to 120–180 photon units in the far-UV and 300–400 photon units in the near-UV. We find that molecular hydrogen fluorescence contributes to the far-UV when the 100 μm surface brightness is greater than 1.08 MJy sr‑1.

FogEye UV Sensor System : Low Visibility Landing Test (Phase IV Report)

DOT National Transportation Integrated Search

2004-03-01

The potential of FogEye solar blind UV technology to contribute to safe and swift throughput operations at airports has been demonstrated. One application, use of FogEye (Safety Sentry), as an aircraft surface detection sensor has been successfully o...

The NASA probe-class mission concept, CETUS (Cosmic Evolution Through Ultraviolet Spectroscopy)

NASA Astrophysics Data System (ADS)

Heap, Sara; Danchi, William; Burge, James; Dodson, Kelly; Hull, Anthony; Kendrick, Steven; McCandliss, Stephan; Mehle, Gregory; Purves, Lloyd; Sheikh, David; Valente, Martin; Woodruff, Robert A.

2017-09-01

We report on the early phases of a NASA-sponsored study of CETUS (Cosmic Evolution Through Ultraviolet Spectroscopy), a Probe-class mission concept. By definition, the full lifecycle cost of a Probe mission is greater than 400M (i.e. Explorer missions) and less than 1.00B ("Flagship" missions). The animating idea behind our study is that CETUS can help answer fundamental questions about galaxy evolution by carrying out a massive UV imaging and spectroscopic survey of galaxies and combining its findings with data obtained by other survey telescopes of the 2020's. The CETUS mission concept comprises a 1.5-m wide-field telescope and three scientific instruments: a near-UV multi-object slit spectrograph with a micro-shutter array as the slit device; a near-UV and far-UV camera with angular resolution of 0.42" (near-UV) or 0.55" (far-UV); and a near-UV or far-UV single-object spectrograph aimed at providing access to the UV after Hubble is gone. We describe the scientific rationale for CETUS and the telescope and instruments in their early design phase.

LRO Lyman Alpha Mapping Project (LAMP) Far-UV Investigations of Lunar Composition, Porosity, and Space Weathering

NASA Astrophysics Data System (ADS)

Retherford, K. D.; Greathouse, T. K.; Mandt, K. E.; Gladstone, R.; Hendrix, A.; Cahill, J. T.; Liu, Y.; Grava, C.; Hurley, D.; Egan, A.; Kaufmann, D. E.; Raut, U.; Byron, B. D.; Magana, L. O.; Stickle, A. M.; Wyrick, D. Y.; Pryor, W. R.

2017-12-01

Far ultraviolet reflectance measurements of the Moon, icy satellites, comets, and asteroids have proven surprisingly useful for advancing our understanding of planetary surfaces. This new appreciation for planetary far-UV imaging spectroscopy is provided in large part thanks to nearly a decade of investigations with the Lunar Reconnaissance Orbiter (LRO) Lyman Alpha Mapping Project (LAMP). LAMP has demonstrated an innovative nightside observing technique, putting a new light on permanently shadowed regions (PSRs) and other features on the Moon. Dayside far-UV albedo maps complement the nightside data, enabling comparisons of direct and hemispheric (diffuse) illumination derived albedos. We'll discuss the strengths of the far-UV reflectance imaging spectroscopy technique with respect to several new LAMP results. Detections of water frost and hydration signatures near 165 nm, for example, provide constraints on composition that complement infrared spectroscopy, visible imaging, neutron spectroscopy, radar, and other techniques. LRO's polar orbit and high data downlink capabilities enable searches for diurnal variations in spectral signals. At far-UV wavelengths a relatively blue spectral slope is diagnostic of space weathering, which is opposite of the spectral reddening indicator of maturity at wavelengths longward of 180 nm. By utilizing natural diffuse illumination sources on the nightside the far-UV technique is able to identify relative increases in porosity within the PSRs, and provides an additional tool for determining relative surface ages. On October 6, 2016 LAMP enacted a new, more sensitive dayside operating mode that expands its ability to search for diurnally varying hydration signals associated with different regions and features.

Recent Advances in Nanobiotechnology and High-Throughput Molecular Techniques for Systems Biomedicine

PubMed Central

Kim, Eung-Sam; Ahn, Eun Hyun; Chung, Euiheon; Kim, Deok-Ho

2013-01-01

Nanotechnology-based tools are beginning to emerge as promising platforms for quantitative high-throughput analysis of live cells and tissues. Despite unprecedented progress made over the last decade, a challenge still lies in integrating emerging nanotechnology-based tools into macroscopic biomedical apparatuses for practical purposes in biomedical sciences. In this review, we discuss the recent advances and limitations in the analysis and control of mechanical, biochemical, fluidic, and optical interactions in the interface areas of nanotechnology-based materials and living cells in both in vitro and in vivo settings. PMID:24258011

Recent advances in nanobiotechnology and high-throughput molecular techniques for systems biomedicine.

PubMed

Kim, Eung-Sam; Ahn, Eun Hyun; Chung, Euiheon; Kim, Deok-Ho

2013-12-01

Nanotechnology-based tools are beginning to emerge as promising platforms for quantitative high-throughput analysis of live cells and tissues. Despite unprecedented progress made over the last decade, a challenge still lies in integrating emerging nanotechnology-based tools into macroscopic biomedical apparatuses for practical purposes in biomedical sciences. In this review, we discuss the recent advances and limitations in the analysis and control of mechanical, biochemical, fluidic, and optical interactions in the interface areas of nanotechnologybased materials and living cells in both in vitro and in vivo settings.

Distribution of hot stars and hydrogen in the Large Magellanic Cloud

NASA Technical Reports Server (NTRS)

Page, T.; Carruthers, G. R.

1981-01-01

Imagery of the Large Magellanic Cloud (LMC), in the wavelength ranges 1050 to 1600 A and 1250 to 1600 A, was obtained by the S201 far ultraviolet camera during the Apollo 16 mission. These images were reduced to absolute far-UV intensity distributions over the area of the LMC, with 3 to 5 arc min angular resolution. Comparison of these far-UV measurements in the LMC with H sub alpha and 21 cm surveys reveals that interstellar hydrogen in the LMC is often concentrated in 100 pc clouds within 500 pc clouds. Furthermore, at least 25 associations of O-B stars in the LMC are outside the interstellar hydrogen clouds; four of them appear to be on the far side. Far-UV and mid-UV spectra were obtained of stars in 12 of these associations, using the International Ultraviolet Explorer. Equivalent widths of L alpha and six other lines, and relative intensities of the continuum at seven wavelength from 1300 A to 2900 A, were measured. These spectra are also discussed.

Far Ultraviolet Spectroscopy of Saturn's Icy Moon Rhea

NASA Astrophysics Data System (ADS)

Elowitz, Mark; Hendrix, Amanda; Mason, Nigel J.; Sivaraman, Bhalamurugan

2018-01-01

We present an analysis of spatially resolved, far-UV reflectance spectra of Saturn’s icy satellite Rhea, collected by the Cassini Ultraviolet Imaging Spectrograph (UVIS). In recent years ultraviolet spectroscopy has become an important tool for analysing the icy satellites of the outer solar system (1Hendrix & Hansen, 2008). Far-UV spectroscopy provides unique information about the molecular structure and electronic transitions of chemical species. Many molecules that are suspected to be present in the icy surfaces of moons in the outer solar system have broad absorption features due to electronic transitions that occur in the far-UV portion of the spectrum. The studies show that Rhea, like the other icy satellites of the Saturnian system are dominated by water-ice as evident by the 165-nm absorption edge, with minor UV absorbing contaminants. Far-UV spectra of several Saturnian icy satellites, including Rhea and Dione, show an unexplained weak absorption feature centered near 184 nm. To carry out the geochemical survey of Rhea’s surface, the UVIS observations are compared with vacuum-UV spectra of thin-ice samples measured in laboratory experiments. Thin film laboratory spectra of water-ice and other molecular compounds in the solid phase were collected at near-vacuum conditions and temperatures identical to those at the surface of Rhea. Comparison between the observed far-UV spectra of Rhea’s surface ice and modelled spectra based on laboratory absorption measurements of different non-water-ice compounds show that two possible chemical compounds could explain the 184-nm absorption feature. The two molecular compounds include simple chlorine molecules and hydrazine monohydrate. Attempts to explain the source(s) of these compounds on Rhea and the scientific implications of their possible discovery will be summarized.[1] Hendrix, A. R. & Hansen, C. J. (2008). Icarus, 193, pp. 323-333.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sohn, H.; Camacho-Bunquin, J.; Langeslay, R. R.

Well-defined, isolated, single-site organovanadium(III) catalyst on SiO 2 [(SiO 2)V(Mes)(THF)] were synthesized via surface organometallic chemistry, and fully characterized using a combination of analytical and spectroscopic techniques (EA, ICP, 1H NMR, TGA-MS, EPR, XPS, DR-UV/Vis, UV-Raman, DRIFTS, XAS). The catalysts exhibit unprecedented reactivity in liquid- and gas-phase alkene/alkyne hydrogenation. Catalyst poisoning experiments revealed that 100% of the V sites are active for hydrogenation.

Enhancing the far-UV sensitivity of silicon CMOS imaging arrays

NASA Astrophysics Data System (ADS)

Retherford, K. D.; Bai, Yibin; Ryu, Kevin K.; Gregory, J. A.; Welander, Paul B.; Davis, Michael W.; Greathouse, Thomas K.; Winter, Gregory S.; Suntharalingam, Vyshnavi; Beletic, James W.

2014-07-01

We report our progress toward optimizing backside-illuminated silicon PIN CMOS devices developed by Teledyne Imaging Sensors (TIS) for far-UV planetary science applications. This project was motivated by initial measurements at Southwest Research Institute (SwRI) of the far-UV responsivity of backside-illuminated silicon PIN photodiode test structures described in Bai et al., SPIE, 2008, which revealed a promising QE in the 100-200 nm range as reported in Davis et al., SPIE, 2012. Our effort to advance the capabilities of thinned silicon wafers capitalizes on recent innovations in molecular beam epitaxy (MBE) doping processes. Key achievements to date include: 1) Representative silicon test wafers were fabricated by TIS, and set up for MBE processing at MIT Lincoln Laboratory (LL); 2) Preliminary far-UV detector QE simulation runs were completed to aid MBE layer design; 3) Detector fabrication was completed through the pre-MBE step; and 4) Initial testing of the MBE doping process was performed on monitoring wafers, with detailed quality assessments. Early results suggest that potential challenges in optimizing the UV-sensitivity of silicon PIN type CMOS devices, compared with similar UV enhancement methods established for CCDs, have been mitigated through our newly developed methods. We will discuss the potential advantages of our approach and briefly describe future development steps.

Jovian aurora from Juno perijove passes: comparison of ultraviolet and infrared images

NASA Astrophysics Data System (ADS)

Gérard, J.-C.; Bonfond, B.; Adriani, A.; Gladstone, G. R.; Mura, A.; Grodent, D.; Versteeg, M. H.; Greathouse, T. K.; Hue, V.; Altieri, F.; Dinelli, B. M.; Moriconi, M. L.; Migliorini, A.; Radioti, A.; Bolton, S. J.; Connerney, J. E. P.; Levin, S. M.; Fabiano, F.

2017-09-01

The electromagnetic radiation emitted by the Jovian aurora extends from the X-Rays presumably caused by heavy ion precipitation and electron bremsstrahlung to thermal infrared radiation resulting from enhanced heating by high-energy charged particles. Many observations have been made since the 1990s with the Hubble Space Telescope, which was able to image the H2 Lyman and Werner bands that are directly excited by collisions of auroral electrons with H2. Ground-based telescopes obtained spectra and images of the thermal H3+ emission produced by charge transfer between H2+ and H+ ions and neutral H2 molecules in the lower thermosphere. However, so far the geometry of the observations limited the coverage from Earth orbit and only one case of simultaneous UV and infrared emissions has been described in the literature. The Juno mission provides the unique advantage to observe both Jovian hemispheres simultaneously in the two wavelength regions simultaneously and offers a more global coverage with unprecedented spatial resolution. This was the case.

Maximization Network Throughput Based on Improved Genetic Algorithm and Network Coding for Optical Multicast Networks

NASA Astrophysics Data System (ADS)

Wei, Chengying; Xiong, Cuilian; Liu, Huanlin

2017-12-01

Maximal multicast stream algorithm based on network coding (NC) can improve the network's throughput for wavelength-division multiplexing (WDM) networks, which however is far less than the network's maximal throughput in terms of theory. And the existing multicast stream algorithms do not give the information distribution pattern and routing in the meantime. In the paper, an improved genetic algorithm is brought forward to maximize the optical multicast throughput by NC and to determine the multicast stream distribution by hybrid chromosomes construction for multicast with single source and multiple destinations. The proposed hybrid chromosomes are constructed by the binary chromosomes and integer chromosomes, while the binary chromosomes represent optical multicast routing and the integer chromosomes indicate the multicast stream distribution. A fitness function is designed to guarantee that each destination can receive the maximum number of decoding multicast streams. The simulation results showed that the proposed method is far superior over the typical maximal multicast stream algorithms based on NC in terms of network throughput in WDM networks.

Improved functionality of graphene and carbon nanotube hybrid foam architecture by UV-ozone treatment

NASA Astrophysics Data System (ADS)

Wang, Wei; Ruiz, Isaac; Lee, Ilkeun; Zaera, Francisco; Ozkan, Mihrimah; Ozkan, Cengiz S.

2015-04-01

Optimization of the electrode/electrolyte double-layer interface is a key factor for improving electrode performance of aqueous electrolyte based supercapacitors (SCs). Here, we report the improved functionality of carbon materials via a non-invasive, high-throughput, and inexpensive UV generated ozone (UV-ozone) treatment. This process allows precise tuning of the graphene and carbon nanotube hybrid foam (GM) transitionally from ultrahydrophobic to hydrophilic within 60 s. The continuous tuning of surface energy can be controlled by simply varying the UV-ozone exposure time, while the ozone-oxidized carbon nanostructure maintains its integrity. Symmetric SCs based on the UV-ozone treated GM foam demonstrated enhanced rate performance. This technique can be readily applied to other CVD-grown carbonaceous materials by taking advantage of its ease of processing, low cost, scalability, and controllability.Optimization of the electrode/electrolyte double-layer interface is a key factor for improving electrode performance of aqueous electrolyte based supercapacitors (SCs). Here, we report the improved functionality of carbon materials via a non-invasive, high-throughput, and inexpensive UV generated ozone (UV-ozone) treatment. This process allows precise tuning of the graphene and carbon nanotube hybrid foam (GM) transitionally from ultrahydrophobic to hydrophilic within 60 s. The continuous tuning of surface energy can be controlled by simply varying the UV-ozone exposure time, while the ozone-oxidized carbon nanostructure maintains its integrity. Symmetric SCs based on the UV-ozone treated GM foam demonstrated enhanced rate performance. This technique can be readily applied to other CVD-grown carbonaceous materials by taking advantage of its ease of processing, low cost, scalability, and controllability. Electronic supplementary information (ESI) available. See DOI: 10.1039/c4nr06795a

Rocket and spacecraft studies of ultraviolet emissions from astrophysical targets

NASA Technical Reports Server (NTRS)

Fastie, W. G.; Moos, H. W.; Feldman, P. D.; Henry, R. C.

1975-01-01

Rocket and spacecraft far-UV spectral measurements of several astrophysical targets are reviewed. These include observations of Ly-alpha emissions from Arcturus, Apollo-17 far-UV spectrometry of eta UMa and five other stars, Apollo-17 observations of the lunar atmosphere and the diffuse UV background, and far-UV spectral studies of Venus, Jupiter, and Comet Kohoutek. The Arcturus observations indicated a chromosphere with neutral atomic-hydrogen and atomic-oxygen emissions as well as a very weak atomic-carbon line. The planetary studies revealed O I and C I emissions in the Venusian spectrum as well as large Ly-alpha emissions and possible molecular-hydrogen emissions in that of Jupiter. The lunar observations demonstrated that solar protons do not produce an atomic-hydrogen atmosphere on the moon.

High-Throughput Characterization of Intrinsic Disorder in Proteins from the Protein Structure Initiative

PubMed Central

Johnson, Derrick E.; Xue, Bin; Sickmeier, Megan D.; Meng, Jingwei; Cortese, Marc S.; Oldfield, Christopher J.; Le Gall, Tanguy; Dunker, A. Keith; Uversky, Vladimir N.

2012-01-01

The identification of intrinsically disordered proteins (IDPs) among the targets that fail to form satisfactory crystal structures in the Protein Structure Initiative represent a key to reducing the costs and time for determining three-dimensional structures of proteins. To help in this endeavor, several Protein Structure Initiative Centers were asked to send samples of both crystallizable proteins and proteins that failed to crystallize. The abundance of intrinsic disorder in these proteins was evaluated via computational analysis using Predictors of Natural Disordered Regions (PONDR®) and the potential cleavage sites and corresponding fragments were determined. Then, the target proteins were analyzed for intrinsic disorder by their resistance to limited proteolysis. The rates of tryptic digestion of sample target proteins were compared to those of lysozyme/myoglobin, apo-myoglobin and α-casein as standards of ordered, partially disordered and completely disordered proteins, respectively. At the next stage, the protein samples were subjected to both far-UV and near-UV circular dichroism (CD) analysis. For most of the samples, a good agreement between CD data, predictions of disorder and the rates of limited tryptic digestion was established. Further experimentation is being performed on a smaller subset of these samples in order to obtain more detailed information on the ordered/disordered nature of the proteins. PMID:22651963

The Ultraviolet Sky: classification and properties of UV sources from the GALEX surveys

NASA Astrophysics Data System (ADS)

Bianchi, L.; Rodriguez, L.; Herald, J.; Efremova, B.; GALEX Team

2005-12-01

We use UV imaging data from the GALEX (Galaxy Evolution Explorer) surveys, matched to other surveys at longer wavelengths, to classify sources and infer their physical parameters by comparing their measured UV - optical - IR colors to model colors. Our results significantly increase the statistics of some classes of astrophysical objects, such as Milky Way (MW) hot stars and low-redshift QSOs, and provide an unprecedented census of White Dwarfs in the MW. Results from follow-up spectroscopy of UV-selected sources are also presented. (see http://dolomiti.pha.jhu.edu for details ) We gratefully acknowledge NASA's support for construction, operation and data analysis of the GALEX mission, developed in cooperation with the French CNES and Korean Ministry of Science and Technology.

Far Ultraviolet Spectroscopic Explorer Observations of the Seyfert 1.5 Galaxy NGC 5548 in a Low State

NASA Technical Reports Server (NTRS)

Brotherton, M. S.; Green, R. F.; Kriss, G. A.; Oegerle, W.; Kaiser, M. E.; Zheng, W.; Hutchings, J. B.; Fisher, Richard R. (Technical Monitor)

2001-01-01

We present far-ultraviolet spectra of the Seyfert 1.5 galaxy NGC 5548 obtained in 2000 June with the Far Ultraviolet Spectroscopic Explorer (FUSE). Our data span the observed wavelength range 915-1185 A at a resolution of approximately 20 km s(exp -1). The spectrum shows a weak continuum and emission from O VI (lambda)(lambda)1032, 1038, C III (lambda)977, and He II (lambda)1085. The FUSE data were obtained when the AGN (Active Galactic Nuclei) was in a low state, which has revealed strong, narrow O VI emission lines. We also resolve intrinsic, associated absorption lines of O VI and the Lyman series. Several distinct kinematic components are present, spanning a velocity range of approximately 0 to -1300 km s(exp -1) relative to systemic, with kinematic structure similar to that seen in previous observations of longer wavelength ultraviolet (UV) lines. We explore the relationships between the far-UV (ultraviolet) absorbers and those seen previously in the UV and X-rays. We find that the high-velocity UV absorption component is consistent with being low-ionization, contrary to some previous claims, and is consistent with its non-detection in high-resolution X-ray spectra. The intermediate velocity absorbers, at -300 to -400 km s(exp -1), show H I and O VI column densities consistent with having contributions from both a high-ionization X-ray absorber and a low-ionization UV absorber. No single far-UV absorbing component can be solely identified with the X-ray absorber.

Potential of far-ultraviolet absorption spectroscopy as a highly sensitive qualitative and quantitative analysis method for polymer films, part I: classification of commercial food wrap films.

PubMed

Sato, Harumi; Higashi, Noboru; Ikehata, Akifumi; Koide, Noriko; Ozaki, Yukihiro

2007-07-01

The aim of the present study is to propose a totally new technique for the utilization of far-ultraviolet (UV) spectroscopy in polymer thin film analysis. Far-UV spectra in the 120-300 nm region have been measured in situ for six kinds of commercial polymer wrap films by use of a novel type of far-UV spectrometer that does not need vacuum evaporation. These films can be straightforwardly classified into three groups, polyethylene (PE) films, polyvinyl chloride (PVC) films, and polyvinylidene chloride (PVDC) films, by using the raw spectra. The differences in the wavelength of the absorption band due to the sigma-sigma* transition of the C-C bond have been used for the classification of the six kinds of films. Using this method, it was easy to distinguish the three kinds of PE films and to separate the two kinds of PVDC films. Compared with other spectroscopic methods, the advantages of this technique include nondestructive analysis, easy spectral measurement, high sensitivity, and simple spectral analysis. The present study has demonstrated that far-UV spectroscopy is a very promising technique for polymer film analysis.

Optimization of High-Throughput Sequencing Kinetics for determining enzymatic rate constants of thousands of RNA substrates

PubMed Central

Niland, Courtney N.; Jankowsky, Eckhard; Harris, Michael E.

2016-01-01

Quantification of the specificity of RNA binding proteins and RNA processing enzymes is essential to understanding their fundamental roles in biological processes. High Throughput Sequencing Kinetics (HTS-Kin) uses high throughput sequencing and internal competition kinetics to simultaneously monitor the processing rate constants of thousands of substrates by RNA processing enzymes. This technique has provided unprecedented insight into the substrate specificity of the tRNA processing endonuclease ribonuclease P. Here, we investigate the accuracy and robustness of measurements associated with each step of the HTS-Kin procedure. We examine the effect of substrate concentration on the observed rate constant, determine the optimal kinetic parameters, and provide guidelines for reducing error in amplification of the substrate population. Importantly, we find that high-throughput sequencing, and experimental reproducibility contribute their own sources of error, and these are the main sources of imprecision in the quantified results when otherwise optimized guidelines are followed. PMID:27296633

Unprecedented 22,26-seco physalins from Physalis angulata and their anti-inflammatory potential.

PubMed

Sun, Cheng-Peng; Oppong, Mahmood Brobbey; Zhao, Feng; Chen, Li-Xia; Qiu, Feng

2017-10-25

Two novel physalins, including a 22,26-seco physalin, physalin X (1), and a 11,15-cyclo-9(10),14(17),22(26)-triseco physalin with an unprecedented aromatic ring, aromaphysalin B (2), were isolated from Physalis angulata L. Their structures were determined by IR, UV, HRESIMS, and 2D NMR spectra as well as theoretical calculations. Compounds 1 and 2 exhibited inhibitory activities on NO production with IC 50 values of 68.50 and 29.69 μM, respectively. A plausible biosynthetic pathway for 2 is also discussed.

Very high resolution UV and X-ray spectroscopy and imagery of solar active regions

NASA Technical Reports Server (NTRS)

Bruner, M.; Brown, W. A.; Haisch, B. M.

1987-01-01

A scientific investigation of the physics of the solar atmosphere, which uses the techniques of high resolution soft X-ray spectroscopy and high resolution UV imagery, is described. The experiments were conducted during a series of three sounding rocket flights. All three flights yielded excellent images in the UV range, showing unprecedented spatial resolution. The second flight recorded the X-ray spectrum of a solar flare, and the third that of an active region. A normal incidence multi-layer mirror was used during the third flight to make the first astronomical X-ray observations using this new technique.

Exploring Mercury's Surface in UltraViolet from Orbit

NASA Astrophysics Data System (ADS)

Izenberg, N.

2017-12-01

The MESSENGER Mission's Ultraviolet and Visible Spectrometer (UVVS) component of its Mercury Atmosphere and Surface Composition Spectrometer (MASCS) instrument obtained approximately 4600 point observations of Mercury's surface in middle ultraviolet (MUV; 210 nm - 300 nm) and far ultraviolet (FUV; 119.1 - 122.5 nm and 129.2 - 131.5 nm) wavelengths over the course of its orbital mission, mostly in Mercury's southern hemisphere. Given the very low (<1 to 2 wt %) average abundance of iron in the silicates of Mercury observed by multiple MESSENGER instruments, the near- to middle-ultraviolet wavelengths encompassing the oxygen metal charge transfer band (<400 nm), which is more sensitive to the presence of iron than the classic 1 micron absorption band, provides potentially useful additional compositional insight into the top layer of Mercury's regolith. The presence of nano- and microphase carbon also has potentially significant expression in the ultraviolet, and the interplay and variation between carbon and iron in mercury surface materials is an active area of investigation. Analysis of middle-UV surface reflectance and parameters appear to support the presence of varying amounts of carbon in different spectral or geologic units on Mercury. Far-UV reflectance data is currently under-utilized, but analysis of lunar surface by the Lunar Reconnaissance Orbiter (LRO) Lyman Alpha Mapping Project (LAMP) indicate that the data are sensitive to both composition and space weathering. The far-UV reflectance from MASCS may provide similar information for the Mercury surface, complementing results from longer wavelengths. MESSENGER data products for surface reflectance include middle-UV reflectance spectra, ultraviolet far-UV reflectance values, combined middle-UV through near-infrared spectra (210 nm - 1450 nm), a global `spectral cube' of near-UV to near-IR, and an upcoming UV spectral cube.

Isolated, well-defined organovanadium(iii) on silica: Single-site catalyst for hydrogenation of alkenes and alkynes

DOE PAGES

Sohn, H.; Camacho-Bunquin, J.; Langeslay, R. R.; ...

2017-05-03

Well-defined, isolated, single-site organovanadium(III) catalyst on SiO 2 [(SiO 2)V(Mes)(THF)] were synthesized via surface organometallic chemistry, and fully characterized using a combination of analytical and spectroscopic techniques (EA, ICP, 1H NMR, TGA-MS, EPR, XPS, DR-UV/Vis, UV-Raman, DRIFTS, XAS). The catalysts exhibit unprecedented reactivity in liquid- and gas-phase alkene/alkyne hydrogenation. Catalyst poisoning experiments revealed that 100% of the V sites are active for hydrogenation.

An Ultraviolet/Optical Atlas of Bright Galaxies

NASA Astrophysics Data System (ADS)

Marcum, Pamela M.; O'Connell, Robert W.; Fanelli, Michael N.; Cornett, Robert H.; Waller, William H.; Bohlin, Ralph C.; Neff, Susan G.; Roberts, Morton S.; Smith, Andrew M.; Cheng, K.-P.; Collins, Nicholas R.; Hennessy, Gregory S.; Hill, Jesse K.; Hill, Robert S.; Hintzen, Paul; Landsman, Wayne B.; Ohl, Raymond G.; Parise, Ronald A.; Smith, Eric P.; Freedman, Wendy L.; Kuchinski, Leslie E.; Madore, Barry; Angione, Ronald; Palma, Christopher; Talbert, Freddie; Stecher, Theodore P.

2001-02-01

We present wide-field imagery and photometry of 43 selected nearby galaxies of all morphological types at ultraviolet and optical wavelengths. The ultraviolet (UV) images, in two broad bands at 1500 and 2500 Å, were obtained using the Ultraviolet Imaging Telescope (UIT) during the Astro-1 Spacelab mission. The UV images have ~3" resolution, and the comparison sets of ground-based CCD images (in one or more of B, V, R, and Hα) have pixel scales and fields of view closely matching the UV frames. The atlas consists of multiband images and plots of UV/optical surface brightness and color profiles. Other associated parameters, such as integrated photometry and half-light radii, are tabulated. In an appendix, we discuss the sensitivity of different wavebands to a galaxy's star formation history in the form of ``history weighting functions'' and emphasize the importance of UV observations as probes of evolution during the past 10-1000 Myr. We find that UV galaxy morphologies are usually significantly different from visible band morphologies as a consequence of spatially inhomogeneous stellar populations. Differences are quite pronounced for systems in the middle range of Hubble types, Sa through Sc, but less so for ellipticals or late-type disks. Normal ellipticals and large spiral bulges are fainter and more compact in the UV. However, they typically exhibit smooth UV profiles with far-UV/optical color gradients which are larger than any at optical/IR wavelengths. The far-UV light in these cases is probably produced by extreme horizontal branch stars and their descendants in the dominant, low-mass, metal-rich population. The cool stars in the large bulges of Sa and Sb spirals fade in the UV while hot OB stars in their disks brighten, such that their Hubble classifications become significantly later. In the far-UV, early-type spirals often appear as peculiar, ringlike systems. In some spiral disks, UV-bright structures closely outline the spiral pattern; in others, the disks can be much more fragmented and chaotic than at optical wavelengths. Contributions by bright active galactic nuclei (AGNs) to the integrated UV light in our sample range from less than 10% to nearly 100%. A number of systems have unusual UV-bright structures in their inner disks, including rings, compact knots, and starburst nuclei, which could easily dominate the UV light in high-redshift analogs. A significant but variable fraction of the far-UV light in spiral disks is diffuse rather than closely concentrated to star-forming regions. Dust in normal spiral disks does not control UV morphologies, even in some highly inclined disk systems. The heaviest extinction is apparently confined to thin layers and the immediate vicinity of young H II complexes; the UV light emerges from thicker star distributions, regions evacuated of dust by photodestruction or winds, or by virtue of strong dust clumpiness. Only in cases where the dust layers are disturbed does dust appear to be a major factor in UV morphology. The UV-bright plume of M82 indicates that dust scattering of UV photons can be important in some cases. In a companion paper, we discuss far-UV data from the Astro-2 mission and optical comparisons for another 35 galaxies, emphasizing face-on spirals.

Sequential double second-order nonlinear optical switch by an acido-triggered photochromic cyclometallated platinum(II) complex.

PubMed

Boixel, Julien; Guerchais, Véronique; Le Bozec, Hubert; Chantzis, Agisilaos; Jacquemin, Denis; Colombo, Alessia; Dragonetti, Claudia; Marinotto, Daniele; Roberto, Dominique

2015-05-07

An unprecedented DTE-based Pt(II) complex, 2(o), which stands as the first example of a sequential double nonlinear optical switch, induced first by protonation and next upon irradiation with UV light is presented.

The SOLAR-C Mission: Plan B Payload Concept

NASA Astrophysics Data System (ADS)

Shimizu, T.; Sakao, T.; Katsukawa, Y.; Group, J. S. W.

2012-08-01

The telescope concepts for the SOLAR-C Plan B mission as of the time of the Hinode-3 meeting were briefly presented for having comments from the international solar physics community. The telescope candidates are 1) near IR-visible-UV telescope with 1.5m aperture and enhanced spectro-polarimetric capability, 2) UV/EUV high throughput spectrometer, and 3) next generation X-ray telescope.

Preillumination of lettuce seedlings with red light enhances the resistance of photosynthetic apparatus to UV-A.

PubMed

Kreslavski, Vladimir D; Lyubimov, Valery Yu; Shirshikova, Galina N; Shmarev, Alexander N; Kosobryukhov, Anatoly A; Schmitt, Franz-Josef; Friedrich, Thomas; Allakhverdiev, Suleyman I

2013-05-05

Seedlings of 10-day-old lettuce (Lactuca sativa L., cultivar Berlin) were preilluminated by low intensity red light (λmax=660 nm, 10 min, 5 μmol quanta m(-2) s(-1)) and far-red light (λmax=730 nm, 10 min, 5 μmol quanta m(-2) s(-1)) to study the effect of pre-treatment on photosynthesis, photochemical activity of photosystem II (PSII), the contents of photosynthetic and UV-A-absorbing pigments (UAPs) and H2O2, as well as total and ascorbate peroxidase activities in cotyledonary leaves of seedlings exposed to UV-A. UV radiation reduced the photosynthetic rate (Pn), the activity of PSII, and the contents of Chl a and b, carotenoids and UAPs in the leaves, but increased the content of H2O2 and the total peroxidase activity. Preillumination with red light removed these effects of UV. In turn, the illumination with red light, then far-red light removed the effect of the red light. Illumination with red light alone increased the content of UAPs, as well as peroxidase activity. It is suggested that higher resistance of the lettuce photosynthetic apparatus to UV-A radiation is associated with involvement of the active form of phytochrome B, thereby increasing peroxidase activities as well as UAPs and saving preservation of photosynthetic pigment contents due to pre-illumination with red light. Copyright © 2013 Elsevier B.V. All rights reserved.

Image-based computational quantification and visualization of genetic alterations and tumour heterogeneity

PubMed Central

Zhong, Qing; Rüschoff, Jan H.; Guo, Tiannan; Gabrani, Maria; Schüffler, Peter J.; Rechsteiner, Markus; Liu, Yansheng; Fuchs, Thomas J.; Rupp, Niels J.; Fankhauser, Christian; Buhmann, Joachim M.; Perner, Sven; Poyet, Cédric; Blattner, Miriam; Soldini, Davide; Moch, Holger; Rubin, Mark A.; Noske, Aurelia; Rüschoff, Josef; Haffner, Michael C.; Jochum, Wolfram; Wild, Peter J.

2016-01-01

Recent large-scale genome analyses of human tissue samples have uncovered a high degree of genetic alterations and tumour heterogeneity in most tumour entities, independent of morphological phenotypes and histopathological characteristics. Assessment of genetic copy-number variation (CNV) and tumour heterogeneity by fluorescence in situ hybridization (ISH) provides additional tissue morphology at single-cell resolution, but it is labour intensive with limited throughput and high inter-observer variability. We present an integrative method combining bright-field dual-colour chromogenic and silver ISH assays with an image-based computational workflow (ISHProfiler), for accurate detection of molecular signals, high-throughput evaluation of CNV, expressive visualization of multi-level heterogeneity (cellular, inter- and intra-tumour heterogeneity), and objective quantification of heterogeneous genetic deletions (PTEN) and amplifications (19q12, HER2) in diverse human tumours (prostate, endometrial, ovarian and gastric), using various tissue sizes and different scanners, with unprecedented throughput and reproducibility. PMID:27052161

Image-based computational quantification and visualization of genetic alterations and tumour heterogeneity.

PubMed

Zhong, Qing; Rüschoff, Jan H; Guo, Tiannan; Gabrani, Maria; Schüffler, Peter J; Rechsteiner, Markus; Liu, Yansheng; Fuchs, Thomas J; Rupp, Niels J; Fankhauser, Christian; Buhmann, Joachim M; Perner, Sven; Poyet, Cédric; Blattner, Miriam; Soldini, Davide; Moch, Holger; Rubin, Mark A; Noske, Aurelia; Rüschoff, Josef; Haffner, Michael C; Jochum, Wolfram; Wild, Peter J

2016-04-07

Recent large-scale genome analyses of human tissue samples have uncovered a high degree of genetic alterations and tumour heterogeneity in most tumour entities, independent of morphological phenotypes and histopathological characteristics. Assessment of genetic copy-number variation (CNV) and tumour heterogeneity by fluorescence in situ hybridization (ISH) provides additional tissue morphology at single-cell resolution, but it is labour intensive with limited throughput and high inter-observer variability. We present an integrative method combining bright-field dual-colour chromogenic and silver ISH assays with an image-based computational workflow (ISHProfiler), for accurate detection of molecular signals, high-throughput evaluation of CNV, expressive visualization of multi-level heterogeneity (cellular, inter- and intra-tumour heterogeneity), and objective quantification of heterogeneous genetic deletions (PTEN) and amplifications (19q12, HER2) in diverse human tumours (prostate, endometrial, ovarian and gastric), using various tissue sizes and different scanners, with unprecedented throughput and reproducibility.

VIIRS VisNIR/SMWIR end of life sensitivity predictions

NASA Astrophysics Data System (ADS)

Murgai, Vijay; Nelson, Neil; Johnson, Eric; Yokoyama, Karen

2012-09-01

The Visible/Infrared Imaging Radiometer Suite (VIIRS) is a key sensor on the Suomi National Polar-orbiting Partnership (NPP) satellite launched on October 28, 2011 into a polar orbit of 824 km nominal altitude. VIIRS collects radiometric and imagery data of the Earth's atmosphere, oceans, and land surfaces in 22 spectral bands spanning the visible and infrared spectrum from 0.4 to 12.5 μm. The radiometric response for VIIRS spectral bands in the 600 - 2300 nm wavelength range (I1, M5, M6, M7 / I2, M8, M9, M10 / I3, M11), which started with significant signal to noise ratio margin at beginning of life, has shown some degradation on orbit. This degradation has been correlated with UV exposure of the VIIRS optics. UV exposure of witness samples from the Rotating Telescope Assembly (RTA) mirrors by Aerospace Corporation showed reflectance loss with the same spectral signature as the response degradation observed for VIIRS. The investigation and root cause determination for the VIIRS response degradation are discussed in separate papers. A model of VIIRS throughput degradation has been developed from witness sample UV exposure test results made by Aerospace. A direct relationship is assumed between UV dose (fluence) and the reflectance degradation of the RTA mirrors. The UV dose on orbit for the primary mirror is proportional to the incident earthshine and its solid angle of view. For subsequent mirrors the UV dose is weighted by solid angle and preceding mirror UV reflectance. UV dose is converted to reflectance change based on witness sample exposure measurements. The change in VIIRS throughput is calculated by multiplying the reflectance of the four RTA mirrors and agrees with the on-orbit measured response changes as a function of UV exposure time. Model predictions of the radiometric sensitivity for the affected VIIRS bands show positive margin at end of life for all affected bands.

Cosmic Evolution Through UV Spectroscopy (CETUS): A NASA Probe-Class Mission Concept

NASA Astrophysics Data System (ADS)

Heap, Sara R.; CETUS Team

2017-01-01

CETUS is a probe-class mission concept proposed for study to NASA in November 2016. Its overarching objective is to provide access to the ultraviolet (~100-400 nm) after Hubble has died. CETUS will be a major player in the emerging global network of powerful, new telescopes such as E-ROSITA, DESI, Subaru/PFS, GMT, LSST, WFIRST, JWST, and SKA. The CETUS mission concept provisionally features a 1.5-m telescope with a suite of instruments including a near-UV multi-object spectrograph (200-400 nm) complementing Subaru/PFS observations, wide-field far-UV and near-UV cameras, and far-UV and near-UV spectrographs that can be operated in either high-resolution or low-resolution mode. We have derived the scope and specific science requirements for CETUS for understanding the evolutionary history of galaxies, stars, and dust, but other applications are possible.

A HUBBLE SPACE TELESCOPE/COSMIC ORIGINS SPECTROGRAPH SEARCH FOR WARM-HOT BARYONS IN THE Mrk 421 SIGHT LINE

DOE Office of Scientific and Technical Information (OSTI.GOV)

Danforth, Charles W.; Stocke, John T.; Keeney, Brian A.

2011-12-10

Thermally broadened Ly{alpha} absorbers (BLAs) offer an alternate method to using highly ionized metal absorbers (O VI, O VII, etc.) to probe the warm-hot intergalactic medium (WHIM, T = 10{sup 5}-10{sup 7} K). Until now, WHIM surveys via BLAs have been no less ambiguous than those via far-UV and X-ray metal-ion probes. Detecting these weak, broad features requires background sources with a well-characterized far-UV continuum and data of very high quality. However, a recent Hubble Space Telescope/Cosmic Origins Spectrograph (COS) observation of the z = 0.03 blazar Mrk 421 allows us to perform a metal-independent search for WHIM gas withmore » unprecedented precision. The data have high signal-to-noise ratio (S/N Almost-Equal-To 50 per {approx}20 km s{sup -1} resolution element) and the smooth, power-law blazar spectrum allows a fully parametric continuum model. We analyze the Mrk 421 sight line for BLA absorbers, particularly for counterparts to the proposed O VII WHIM systems reported by Nicastro et al. based on Chandra/Low Energy Transmission Grating observations. We derive the Ly{alpha} profiles predicted by the X-ray observations. The S/N of the COS data is high (S/N Almost-Equal-To 25 pixel{sup -1}), but much higher S/N can be obtained by binning the data to widths characteristic of the expected BLA profiles. With this technique, we are sensitive to WHIM gas over a large (N{sub H}, T) parameter range in the Mrk 421 sight line. We rule out the claimed Nicastro et al. O VII detections at their nominal temperatures (T {approx} 1-2 Multiplication-Sign 10{sup 6} K) and metallicities (Z = 0.1 Z{sub Sun }) at {approx}> 2{sigma} level. However, WHIM gas at higher temperatures and/or higher metallicities is consistent with our COS non-detections.« less

A Simple Spreadsheet Program to Simulate and Analyze the Far-UV Circular Dichroism Spectra of Proteins

ERIC Educational Resources Information Center

Abriata, Luciano A.

2011-01-01

A simple algorithm was implemented in a spreadsheet program to simulate the circular dichroism spectra of proteins from their secondary structure content and to fit [alpha]-helix, [beta]-sheet, and random coil contents from experimental far-UV circular dichroism spectra. The physical basis of the method is briefly reviewed within the context of…

CellBase, a comprehensive collection of RESTful web services for retrieving relevant biological information from heterogeneous sources.

PubMed

Bleda, Marta; Tarraga, Joaquin; de Maria, Alejandro; Salavert, Francisco; Garcia-Alonso, Luz; Celma, Matilde; Martin, Ainoha; Dopazo, Joaquin; Medina, Ignacio

2012-07-01

During the past years, the advances in high-throughput technologies have produced an unprecedented growth in the number and size of repositories and databases storing relevant biological data. Today, there is more biological information than ever but, unfortunately, the current status of many of these repositories is far from being optimal. Some of the most common problems are that the information is spread out in many small databases; frequently there are different standards among repositories and some databases are no longer supported or they contain too specific and unconnected information. In addition, data size is increasingly becoming an obstacle when accessing or storing biological data. All these issues make very difficult to extract and integrate information from different sources, to analyze experiments or to access and query this information in a programmatic way. CellBase provides a solution to the growing necessity of integration by easing the access to biological data. CellBase implements a set of RESTful web services that query a centralized database containing the most relevant biological data sources. The database is hosted in our servers and is regularly updated. CellBase documentation can be found at http://docs.bioinfo.cipf.es/projects/cellbase.

Sorting Out Antibiotics' Mechanisms of Action: a Double Fluorescent Protein Reporter for High-Throughput Screening of Ribosome and DNA Biosynthesis Inhibitors

PubMed Central

Osterman, Ilya A.; Komarova, Ekaterina S.; Shiryaev, Dmitry I.; Korniltsev, Ilya A.; Khven, Irina M.; Lukyanov, Dmitry A.; Tashlitsky, Vadim N.; Serebryakova, Marina V.; Efremenkova, Olga V.; Ivanenkov, Yan A.; Bogdanov, Alexey A.; Dontsova, Olga A.

2016-01-01

In order to accelerate drug discovery, a simple, reliable, and cost-effective system for high-throughput identification of a potential antibiotic mechanism of action is required. To facilitate such screening of new antibiotics, we created a double-reporter system for not only antimicrobial activity detection but also simultaneous sorting of potential antimicrobials into those that cause ribosome stalling and those that induce the SOS response due to DNA damage. In this reporter system, the red fluorescent protein gene rfp was placed under the control of the SOS-inducible sulA promoter. The gene of the far-red fluorescent protein, katushka2S, was inserted downstream of the tryptophan attenuator in which two tryptophan codons were replaced by alanine codons, with simultaneous replacement of the complementary part of the attenuator to preserve the ability to form secondary structures that influence transcription termination. This genetically modified attenuator makes possible Katushka2S expression only upon exposure to ribosome-stalling compounds. The application of red and far-red fluorescent proteins provides a high signal-to-background ratio without any need of enzymatic substrates for detection of the reporter activity. This reporter was shown to be efficient in high-throughput screening of both synthetic and natural chemicals. PMID:27736765

Unexpected Far-Ultraviolet Photometric Characteristics On Mimas

NASA Astrophysics Data System (ADS)

Royer, E. M.; Hendrix, A. R.

2013-12-01

While infrared and visible are the most common wavelength domains used to investigate planetary surfaces, ultraviolet (UV) data are significant and useful. Here, we present the first far-UV phase curves of Mimas, thus displaying another piece of the Saturnian System puzzle. Our preliminary results shows that, one more time, Mimas surface properties are far from what we was expected. Namely, we observe a leading hemisphere brighter than the trailing hemisphere at some far-UV wavelengths. We used the far-UV channel of the Cassini/UVIS instrument, ranging from 118 to 190 nm. Disk-integrated phase curves for the leading hemisphere and the trailing hemisphere, at 180nm, have been produced. Data points span from 0.5 to 163.5 degrees in phase angle. Mimas displays a leading hemisphere brighter than its trailing hemisphere, when theory and previous Voyager observations at longer wavelengths attest of a brighter trailing hemisphere due to the impact of the E-ring grains on this face of the satellite. Surprisingly, UVIS data show a very bright opposition effect on Mimas leading hemisphere, greater than what is observed on Tethys or Dione leading hemisphere at the same wavelength of 180 nm. Preliminary results of photometric properties modeling seem to indicate an important contribution of the coherent-backscattering process in the opposition surge. Exogenic processes such as bombardment by energetic electrons and/or E-ring grains are discussed to explain this unexpected surface property of Mimas.

EXPERIMENTS - APOLLO 17

NASA Image and Video Library

1972-11-17

S72-53470 (November 1972) --- The Far-Ultraviolet Spectrometer, Experiment S-169, one of the lunar orbital science experiments which will be mounted in the SIM bay of the Apollo 17 Service Module. Controls for activating and deactivating the experiment and for opening and closing a protective cover are located in the Command Module. Atomic composition, density and scale height for several constituents of the lunar atmosphere will be measured by the far-ultraviolet spectrometer. Solar far-UV radiation reflected from the lunar surface as well as UV radiation emitted by galactic sources also will be detected by the instrument.

The Discovery of Pulsating Hot Subdwarfs in NGC 2808

NASA Technical Reports Server (NTRS)

Brown, Thomas M.; Landsman, Wayne B.; Randall, Suzanna K.; Sweigert, Allen V.; Lanz, Thierry

2013-01-01

We present the results of a Hubble Space Telescope program to search for pulsating hot subdwarfs in the core of NGC 2808. These observations were motivated by the recent discovery of such stars in the outskirts of Omega Cen. Both NGC 2808 and ? Cen are massive globular clusters exhibiting complex stellar populations and large numbers of extreme horizontal branch stars. Our far-UV photometric monitoring of over 100 hot evolved stars has revealed six pulsating subdwarfs with periods ranging from 85 to 149 s and UV amplitudes of 2.0%-6.8%. In the UV color-magnitude diagram of NGC 2808, all six of these stars lie immediately below the canonical horizontal branch, a region populated by the subluminous "blue-hook" stars. For three of these six pulsators, we also have low-resolution far-UV spectroscopy that is sufficient to broadly constrain their atmospheric abundances and effective temperatures. Curiously, and in contrast to the ? Cen pulsators, the NGC 2808 pulsators do not exhibit the spectroscopic or photometric uniformity one might expect from a well-defined instability strip, although they all fall within a narrow band (0.2 mag) of far-UV luminosity.

Enhancing the far-ultraviolet sensitivity of silicon complementary metal oxide semiconductor imaging arrays

NASA Astrophysics Data System (ADS)

Retherford, Kurt D.; Bai, Yibin; Ryu, Kevin K.; Gregory, James A.; Welander, Paul B.; Davis, Michael W.; Greathouse, Thomas K.; Winters, Gregory S.; Suntharalingam, Vyshnavi; Beletic, James W.

2015-10-01

We report our progress toward optimizing backside-illuminated silicon P-type intrinsic N-type complementary metal oxide semiconductor devices developed by Teledyne Imaging Sensors (TIS) for far-ultraviolet (UV) planetary science applications. This project was motivated by initial measurements at Southwest Research Institute of the far-UV responsivity of backside-illuminated silicon PIN photodiode test structures, which revealed a promising QE in the 100 to 200 nm range. Our effort to advance the capabilities of thinned silicon wafers capitalizes on recent innovations in molecular beam epitaxy (MBE) doping processes. Key achievements to date include the following: (1) representative silicon test wafers were fabricated by TIS, and set up for MBE processing at MIT Lincoln Laboratory; (2) preliminary far-UV detector QE simulation runs were completed to aid MBE layer design; (3) detector fabrication was completed through the pre-MBE step; and (4) initial testing of the MBE doping process was performed on monitoring wafers, with detailed quality assessments.

76 FR 35672 - Revised Effectiveness Determination; Sunscreen Drug Products for Over-the-Counter Human Use

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-17

... are given ultraviolet (UV) radiation doses produced by a solar simulator (i.e., a UV lamp). Under... increasingly higher UV doses produced by the solar simulator. However, because the solar simulator can produce far higher UV radiation doses than a consumer would ever receive even under the most severe sun...

The MUSCLES Treasury Survey: Temporally- and Spectrally-Resolved Irradiance from Low-mass Exoplanet Host Stars

NASA Astrophysics Data System (ADS)

France, Kevin; Loyd, R. O. Parke; Youngblood, Allison; Linsky, Jeffrey; MUSCLES Treasury Survey Team

2016-01-01

The spectral and temporal behavior of exoplanet host stars is a critical input to models of the chemistry and evolution of planetary atmospheres. High-energy photons (X-ray to near-UV; 5 - 3200 Ang) from these stars regulate the atmospheric temperature profiles and photochemistry on orbiting planets, influencing the production of potential "biomarker" gases. It has been shown that the atmospheric signatures of potentially habitable planets around low-mass stars may be significantly different from planets orbiting Sun-like stars owing to the different UV spectral energy distribution. I will present results from a panchromatic survey (Hubble/Chandra/XMM/optical) of M and K dwarf exoplanet hosts, the MUSCLES Treasury Survey (Measurements of the Ultraviolet Spectral Characteristics of Low-mass Exoplanetary Systems). We reconstruct the Lyman-alpha and extreme-UV (100-900 Ang) radiation lost to interstellar attenuation and create 5 Angstrom to 5 micron stellar irradiance spectra; these data will be publically available as a High-Level Science Product on MAST. We find that all low-mass exoplanet host stars exhibit significant chromospheric/transition region/coronal emission -- no "UV inactive" M dwarfs are observed. The F(far-UV)/F(near-UV) flux ratio, a driver for possible abiotic production of the suggested biomarkers O2 and O3, increases by ~3 orders of magnitude as the habitable zone moves inward from 1 to 0.1 AU, while the incident far-UV (912 - 1700 Ang) and XUV (5 - 900 Ang) radiation field strengths decrease by factors of a few across this range. Far-UV flare activity is common in 'optically inactive' M dwarfs; statistics from the entire sample indicate that large UV flares (E(300 - 1700 Ang) >= 10^31 erg) occur several times per day on typical M dwarf exoplanet hosts.

Coumarin-BODIPY hybrids by heteroatom linkage: versatile, tunable and photostable dye lasers for UV irradiation.

PubMed

Esnal, I; Duran-Sampedro, G; Agarrabeitia, A R; Bañuelos, J; García-Moreno, I; Macías, M A; Peña-Cabrera, E; López-Arbeloa, I; de la Moya, S; Ortiz, M J

2015-03-28

Linking amino and hydroxycoumarins to BODIPYs through the amino or hydroxyl group lets the easy construction of unprecedented photostable coumarin-BODIPY hybrids with broadened and enhanced absorption in the UV spectral region, and outstanding wavelength-tunable laser action within the green-to-red spectral region (∼520-680 nm). These laser dyes allow the generation of a valuable tunable UV (∼260-350 nm) laser source by frequency doubling, which is essential to study accurately the photochemistry of biological molecules under solar irradiation. The tunability is achieved by selecting the substitution pattern of the hybrid. Key factors are the linking heteroatom (nitrogen vs. oxygen), the number of coumarin units joined to the BODIPY framework and the involved linking positions.

The genetic and molecular basis for sunscreen biosynthesis in cyanobacteria

PubMed Central

Balskus, Emily P.; Walsh, Christopher T.

2011-01-01

UV-A and UV-B radiation are harmful to living systems, causing damage to biological macromolecules. An important strategy for dealing with UV exposure is the biosynthesis of small molecule sunscreens. Among such metabolites, the mycosporine and mycosporine-like amino acids (MAAs) are remarkable for their wide phylogenetic distribution and their unique chemical structures. Here we report the identification of a MAA biosynthetic gene cluster in a cyanobacterium and the discovery of analogous pathways in other sequenced organisms. We have expressed the cluster in a heterologous bacterial host and characterized all four biosynthetic enzymes in vitro. In addition to clarifying the origin of the MAAs, these efforts have revealed two unprecedented enzymatic strategies for imine formation. PMID:20813918

Raman Scattered He II 4332 and Photoionization Model in the Symbiotic Star V1016 Cygni

NASA Astrophysics Data System (ADS)

Lee, H.-W.; Heo, J.-E.; Lee, B.-C.

2014-08-01

Symbiotic stars are wide binary systems of a white dwarf and a mass losing giant. They exhibit unique Raman scattered features as a result of inelastic scattering of far UV line photons by atomic hydrogen. Co-existence of a far UV He II emission region and a thick H I region in symbiotic stars is necessary for the formation of Raman-scattered features blueward of hydrogen Balmer emission lines. Being a single electron atom, He II has the same atomic structure as the hydrogen atom and hence emits far UV emission lines that are slightly blueward of hydrogen Lyman lines. These far UV He II emission lines can be Raman scattered to appear blueward of hydrogen Balmer lines. In particular, the symbiotic star V1016 Cyg is found to exhibit Raman scattered He II 4332 feature in the BOES high resolution spectrum. Our profile fitting of Raman scattered He II 4332 is consistent with the mass loss geometry proposed by Jung & Lee (2004). We use the photoionization code ‘ CLOUDY' to estimate the far UV He II emission lines and make comparisons with the observed Raman scattered He II 4332 blueward of Hγ in the high resolution echelle V1016 Cyg. The emission nebula is assumed to be of uniform density of 108 cm-3 that is illuminated by a black body characterized by its temperature and total luminosity. With our comparisons we conclude that the Raman scattered He II features are consistent with the existence of a photoionized nebula by a hot black body source with temperature 7-8× 104 K with a luminosity 1038erg s-1.

The Timescale-dependent Color Variability of Quasars Viewed with /GALEX

NASA Astrophysics Data System (ADS)

Zhu, Fei-Fan; Wang, Jun-Xian; Cai, Zhen-Yi; Sun, Yu-Han

2016-11-01

In a recent work by Sun et al., the color variation of quasars, namely the bluer-when-brighter trend, was found to be timescale dependent using the SDSS g/r band light curves in Stripe 82. Such timescale dependence, I.e., bluer variation at shorter timescales, supports the thermal fluctuation origin of the UV/optical variation in quasars, and can be modeled well with the inhomogeneous accretion disk model. In this paper, we extend the study to much shorter wavelengths in the rest frame (down to extreme UV) using GALaxy Evolution eXplorer (GALEX) photometric data of quasars collected in two ultraviolet bands (near-UV and far-UV). We develop Monte Carlo simulations to correct for possible biases due to the considerably larger photometric uncertainties in the GALEX light curves (particularly in the far-UV, compared with the SDSS g/r bands), which otherwise could produce artificial results. We securely confirm the previously discovered timescale dependence of the color variability with independent data sets and at shorter wavelengths. We further find that the slope of the correlation between the amplitude of the color variation and timescale appears even steeper than predicted by the inhomogeneous disk model, which assumes that disk fluctuations follow a damped random walk (DRW) process. The much flatter structure function observed in the far-UV compared with that at longer wavelengths implies deviation from the DRW process in the inner disk, where rest-frame extreme UV radiation is produced.

Conjugation of (E)-5-[2-(Methoxycarbonyl)ethenyl]cytidine to hydrophilic microspheres: development of a mobile microscale UV light actinometer.

PubMed

Fang, Shiyue; Guan, Yousheng; Blatchley, Ernest R; Shen, Chengyue; Bergstrom, Donald E

2008-03-01

( E)-5-[2-(Methoxycarbonyl)ethenyl]cytidine was biotinylated through a diisopropylsilylacetal linkage and attached to the surface of hydrophilic streptavidin-coated microspheres through the high-affinity noncovalent interaction between biotin and streptavidin. The functionalized microspheres form a stable suspension in water. Upon UV irradiation, the nonfluorescent ( E)-5-[2-(methoxycarbonyl)ethenyl]cytidine on the microspheres undergoes photocyclization to produce highly fluorescent 3-beta-D-ribofuranosyl-2,7-dioxopyrido[2,3-d]pyrimidine. The fluorescence intensity of the microspheres can be correlated to the particle-specific UV doses applied at different suspension concentrations. The microspheres allow one to measure the UV dose (fluence) distribution in high-throughput water disinfection systems.

How Are Changing Solar Ultraviolet Radiation and Climate Affecting Light-induced Chemical Processes in Aquatic Environments?

EPA Science Inventory

Changes in the ozone layer over the past three decades have resulted in increases in solar UV-B radiation (280-315 nm) that reach the surface of aquatic environments. These changes have been accompanied by unprecedented changes in temperature and precipitation patterns around the...

Fabrication of nanostructured transmissive optical devices on ITO-glass with UV1116 photoresist using high-energy electron beam lithography.

PubMed

Williams, Calum; Bartholomew, Richard; Rughoobur, Girish; Gordon, George S D; Flewitt, Andrew J; Wilkinson, Timothy D

2016-12-02

High-energy electron beam lithography for patterning nanostructures on insulating substrates can be challenging. For high resolution, conventional resists require large exposure doses and for reasonable throughput, using typical beam currents leads to charge dissipation problems. Here, we use UV1116 photoresist (Dow Chemical Company), designed for photolithographic technologies, with a relatively low area dose at a standard operating current (80 kV, 40-50 μC cm -2 , 1 nAs -1 ) to pattern over large areas on commercially coated ITO-glass cover slips. The minimum linewidth fabricated was ∼33 nm with 80 nm spacing; for isolated structures, ∼45 nm structural width with 50 nm separation. Due to the low beam dose, and nA current, throughput is high. This work highlights the use of UV1116 photoresist as an alternative to conventional e-beam resists on insulating substrates. To evaluate suitability, we fabricate a range of transmissive optical devices, that could find application for customized wire-grid polarisers and spectral filters for imaging, which operate based on the excitation of surface plasmon polaritons in nanosized geometries, with arrays encompassing areas ∼0.25 cm 2 .

High speed micromachining with high power UV laser

NASA Astrophysics Data System (ADS)

Patel, Rajesh S.; Bovatsek, James M.

2013-03-01

Increasing demand for creating fine features with high accuracy in manufacturing of electronic mobile devices has fueled growth for lasers in manufacturing. High power, high repetition rate ultraviolet (UV) lasers provide an opportunity to implement a cost effective high quality, high throughput micromachining process in a 24/7 manufacturing environment. The energy available per pulse and the pulse repetition frequency (PRF) of diode pumped solid state (DPSS) nanosecond UV lasers have increased steadily over the years. Efficient use of the available energy from a laser is important to generate accurate fine features at a high speed with high quality. To achieve maximum material removal and minimal thermal damage for any laser micromachining application, use of the optimal process parameters including energy density or fluence (J/cm2), pulse width, and repetition rate is important. In this study we present a new high power, high PRF QuasarR 355-40 laser from Spectra-Physics with TimeShiftTM technology for unique software adjustable pulse width, pulse splitting, and pulse shaping capabilities. The benefits of these features for micromachining include improved throughput and quality. Specific example and results of silicon scribing are described to demonstrate the processing benefits of the Quasar's available power, PRF, and TimeShift technology.

Fabrication of nanostructured transmissive optical devices on ITO-glass with UV1116 photoresist using high-energy electron beam lithography

NASA Astrophysics Data System (ADS)

Williams, Calum; Bartholomew, Richard; Rughoobur, Girish; Gordon, George S. D.; Flewitt, Andrew J.; Wilkinson, Timothy D.

2016-12-01

High-energy electron beam lithography for patterning nanostructures on insulating substrates can be challenging. For high resolution, conventional resists require large exposure doses and for reasonable throughput, using typical beam currents leads to charge dissipation problems. Here, we use UV1116 photoresist (Dow Chemical Company), designed for photolithographic technologies, with a relatively low area dose at a standard operating current (80 kV, 40-50 μC cm-2, 1 nAs-1) to pattern over large areas on commercially coated ITO-glass cover slips. The minimum linewidth fabricated was ˜33 nm with 80 nm spacing; for isolated structures, ˜45 nm structural width with 50 nm separation. Due to the low beam dose, and nA current, throughput is high. This work highlights the use of UV1116 photoresist as an alternative to conventional e-beam resists on insulating substrates. To evaluate suitability, we fabricate a range of transmissive optical devices, that could find application for customized wire-grid polarisers and spectral filters for imaging, which operate based on the excitation of surface plasmon polaritons in nanosized geometries, with arrays encompassing areas ˜0.25 cm2.

Quantum Phenomena in High Energy Density Plasmas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Murnane, Margaret; Kapteyn, Henry

The possibility of implementing efficient (phase matched) HHG upconversion of deep- UV lasers in multiply-ionized plasmas, with potentially unprecedented conversion efficiency is a fascinating prospect. HHG results from the extreme nonlinear response of matter to intense laser light:high harmonics are radiated as a result of a quantum coherent electron recollision process that occurs during laser field ionization of an atom. Under current support from this grant in work published in Science in 2015, we discovered a new regime of bright HHG in highly-ionized plasmas driven by intense UV lasers, that generates bright harmonics to photon energies >280eV

Definition of a metrology servo-system for a solar imaging fourier transform spectrometer working in the far UV (IFTSUV)

NASA Astrophysics Data System (ADS)

Ruiz de Galarreta Fanju, C.; Philippon, A.; Bouzit, M.; Appourchaux, T.; Vial, J.-C.; Maillard, J.-P.; Lemaire, P.

2017-11-01

The understanding of the solar outer atmosphere requires a simultaneous combination of imaging and spectral observations concerning the far UV lines that arise from the high chromospheres up to the corona. These observations must be performed with enough spectral, spatial and temporal resolution to reveal the small atmospheric structures and to resolve the solar dynamics. An Imaging Fourier Transform Spectrometer working in the far-UV (IFTSUV, Figure 1) is an attractive instrumental solution to fulfill these requirements. However, due to the short wavelength, to preserve IFTSUV spectral precision and Signal to Noise Ratio (SNR) requires a high optical surface quality and a very accurate (linear and angular) metrology to maintain the optical path difference (OPD) during the entire scanning process by: optical path difference sampling trigger; and dynamic alignment for tip/tilt compensation (Figure 2).

UV spectroscopy with the CETUS multi-object spectrometer

NASA Astrophysics Data System (ADS)

Kendrick, Stephen E.; Woodruff, Robert; Hull, Anthony; Heap, Sara; Kutyrev, Alexander; Purves, Lloyd; Danchi, William

2018-01-01

The ultraviolet multi-object spectrograph (MOS) for the Cosmic Evolution Through UV Spectroscopy (CETUS) concept is a slit-based instrument allowing multiple simultaneous observations over a wide field of view. The UV MOS will be able to target up to 100 objects at a time without the issues of confusion with nearby sources or unwanted background like zodiacal stray light. The multiplexing will allow over 100,000 galaxies to be observed over a typical mission lifetime which greatly enhances the scientific yield. The MOS utilizes a next-generation micro-shutter array, an efficient aspheric Offner-like spectrometer design with a convex grating, and nanotube light traps for suppressing unwanted wavelengths. The optical coatings are also designed for optimizing the UV throughput while minimizing out-of-band signal at the detector.

Multiplexing in astrophysics with a UV multi-object spectrometer on CETUS, a probe-class mission study

NASA Astrophysics Data System (ADS)

Kendrick, Stephen E.; Woodruff, Robert A.; Hull, Tony; Heap, Sara R.; Kutyrev, Alexander; Danchi, William; Purves, Lloyd

2017-09-01

The ultraviolet multi-object spectrograph (MOS) for the Cosmic Evolution Through UV Spectroscopy (CETUS) concept1,2 is a slit-based instrument allowing multiple simultaneous observations over a wide field of view. It utilizes a next-generation micro-shutter array, an efficient aspheric Offner spectrometer design with a convex grating, and carbon nanotube light traps for suppressing unwanted wavelengths. The optical coatings are also designed to optimize the UV throughput while minimizing out-of-band signal at the detector. The UV MOS will be able to target up to 100 objects at a time without the issues of confusion with nearby sources or unwanted background like zodiacal stray light. With this multiplexing, the scientific yield of both Probe and Great Observatories will be greatly enhanced.

Hubble Space Telescope far-ultraviolet imaging of the jet in 3C273: a common emission component from optical to X-rays

NASA Astrophysics Data System (ADS)

Jester, Sebastian; Meisenheimer, Klaus; Martel, André R.; Perlman, Eric S.; Sparks, William B.

2007-09-01

We present far-ultraviolet (far-UV) observations at ~150 nm of the jet of quasar 3C273 obtained with the Advanced Camera for Surveys (ACS) Solar Blind Channel onboard the Hubble Space Telescope. While the jet morphology is very similar to that in the optical and near-UV, the spectral energy distributions of the jet's subregions show an upturn in νfν at 150nm compared to 300nm everywhere in the jet. Moreover, the 150-nm flux is compatible with extrapolating the X-ray power law down to the UV region. This constitutes strong support for a common origin of the jet's far-UV and X-ray emission. It implies that even a substantial fraction of the visible light in the X-ray brightest parts of the jet arises from the same spectral component as the X-rays, as had been suggested earlier based on Spitzer Space Telescope observations. We argue that the identification of this UV/X-ray component opens up the possibility to establish the synchrotron origin of the X-ray emission by optical polarimetry. Based on observations made with the NASA/ESA Hubble Space Telescope (HST), obtained at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-26555. These observations are associated with HST programme GO-9814. This work was begun at the Particle Astrophysics Center, Fermilab, Batavia, IL 60510, USA. ‡ E-mail: jester@mpia.de

Interstellar Silicon Depletion and the Ultraviolet Extinction

NASA Astrophysics Data System (ADS)

Mishra, Ajay; Li, Aigen

2018-01-01

Spinning small silicate grains were recently invoked to account for the Galactic foreground anomalous microwave emission. These grains, if present, will absorb starlight in the far ultraviolet (UV). There is also renewed interest in attributing the enigmatic 2175 Å interstellar extinction bump to small silicates. To probe the role of silicon in the UV extinction, we explore the relations between the amount of silicon required to be locked up in silicates [Si/H]dust and the 2175 Å bump or the far-UV extinction rise, based on an analysis of the extinction curves along 46 Galactic sightlines for which the gas-phase silicon abundance [Si/H]gas is known. We derive [Si/H]dust either from [Si/H]ISM - [Si/H]gas or from the Kramers- Kronig relation which relates the wavelength-integrated extinction to the total dust volume, where [Si/H]ISM is the interstellar silicon reference abundance and taken to be that of proto-Sun or B stars. We also derive [Si/H]dust from fi�tting the observed extinction curves with a mixture of amorphous silicates and graphitic grains. We fi�nd that in all three cases [Si/H]dust shows no correlation with the 2175 Å bump, while the carbon depletion [C/H]dust tends to correlate with the 2175 Å bump. This supports carbon grains instead of silicates as the possible carrier of the 2175 Å bump. We also �find that neither [Si/H]dust nor [C/H]dust alone correlates with the far-UV extinction, suggesting that the far-UV extinction is a combined effect of small carbon grains and silicates.

Interstellar Silicon Depletion and the Ultraviolet Extinction

NASA Astrophysics Data System (ADS)

Mishra, Ajay; Li, Aigen

2017-12-01

Spinning small silicate grains were recently invoked to account for the Galactic foreground anomalous microwave emission. These grains, if present, will absorb starlight in the far-ultraviolet (UV). There is also renewed interest in attributing the enigmatic 2175 \\mathringA interstellar extinction bump to small silicates. To probe the role of silicon in the UV extinction, we explore the relations between the amount of silicon required to be locked up in silicates {[{Si}/{{H}}]}{dust} and the 2175 \\mathringA bump or the far-UV extinction rise, based on an analysis of the extinction curves along 46 Galactic sightlines for which the gas-phase silicon abundance {[{Si}/{{H}}]}{gas} is known. We derive {[{Si}/{{H}}]}{dust} either from {[{Si}/{{H}}]}{ISM}‑{[{Si}/{{H}}]}{gas} or from the Kramers–Kronig relation, which relates the wavelength-integrated extinction to the total dust volume, where {[{Si}/{{H}}]}{ISM} is the interstellar silicon reference abundance and taken to be that of proto-Sun or B stars. We also derive {[{Si}/{{H}}]}{dust} from fitting the observed extinction curves with a mixture of amorphous silicates and graphitic grains. We find that in all three cases {[{Si}/{{H}}]}{dust} shows no correlation with the 2175 \\mathringA bump, while the carbon depletion {[{{C}}/{{H}}]}{dust} tends to correlate with the 2175 \\mathringA bump. This supports carbon grains instead of silicates as the possible carriers of the 2175 \\mathringA bump. We also find that neither {[{Si}/{{H}}]}{dust} nor {[{{C}}/{{H}}]}{dust} alone correlates with the far-UV extinction, suggesting that the far-UV extinction is a combined effect of small carbon grains and silicates.

University of Texas MD Anderson Cancer Center: High-Throughput Screening Identifying Driving Mutations in Endometrial Cancer | Office of Cancer Genomics

Cancer.gov

Recent advances in next-generation sequencing technology have enabled the unprecedented characterization of a full spectrum of somatic alterations in cancer genomes. Given the large numbers of somatic mutations typically detected by this approach, a key challenge in the downstream analysis is to distinguish “drivers” that functionally contribute to tumorigenesis from “passengers” that occur as the consequence of genomic instability.

Aluminum Mirror Coatings for UVOIR Telescope Optics Including the Far UV

NASA Technical Reports Server (NTRS)

Balasubramanian, Kunjithapatha; Hennessy, John; Raouf, Nasrat; Nikzad, Shouleh; Ayala, Michael; Shaklan, Stuart; Scowen, Paul; Del Hoyo, Javier; Quijada, Manuel

2015-01-01

NASA Cosmic Origins (COR) Program identified the development of high reflectivity mirror coatings for large astronomical telescopes particularly for the far ultra violet (FUV) part of the spectrum as a key technology requiring significant materials research and process development. In this paper we describe the challenges and accomplishments in producing stable high reflectance aluminum mirror coatings with conventional evaporation and advanced Atomic Layer Deposition (ALD) techniques. We present the current status of process development with reflectance of approx. 55 to 80% in the FUV achieved with little or no degradation over a year. Keywords: Large telescope optics, Aluminum mirror, far UV astrophysics, ALD, coating technology development.

UIT ultraviolet imaging of 30 Doradus

NASA Technical Reports Server (NTRS)

Hintzen, P.; Cheng, K.-P.; Michalitsianos, A.; Bohlin, R.; O'Connell, R.; Cornett, R.; Roberts, M.; Smith, A.; Smith, E.; Stecher, T.

1992-01-01

During the Astro-1 mission, near- and far-UV images of the 30 Doradus region were obtained using the Ultraviolet Imaging Telescope (UIT). These wide-field, 40 min in diameter, high spatial resolution, 2-3 sec, UIT UV images reveal a rich field of luminous UV-bright stars, clusters, and associations. There are 181 stars brighter than m(sub 2558A) = 16.5 and 197 stars brighter than m(sub 1615A) = 16.4 within 3 min diameter of the 30 Doradus central cluster. We have derived UV fluxes emitted from the 30 Doradus central cluster and from its UV bright core, R136. The region within 5 sec of R136 produces approximately 14% of the far-UV flux (lambda = 1892 A) and approximately 16% of the near-UV flux (lambda = 2558 A) emitted from the 3 min diameter central cluster. The derived UV luminosity of R136 at 1892 A is only 7.8 times that of the nearby O6-7 Iaf star, R139, and the m(sub 1892) - m(sub v) colors of R136 are similar to other O or Wolf-Rayet stars in the same region. These UIT data, combined with other published observations at longer wavelengths, indicate that there is no observational evidence for a supermassive star in R136.

UIT ultraviolet imaging of 30 Doradus

NASA Astrophysics Data System (ADS)

Hintzen, P.; Cheng, K.-P.; Michalitsianos, A.; Bohlin, R.; O'Connell, R.; Cornett, R.; Roberts, M.; Smith, A.; Smith, E.; Stecher, T.

During the Astro-1 mission, near- and far-UV images of the 30 Doradus region were obtained using the Ultraviolet Imaging Telescope (UIT). These wide-field, 40 min in diameter, high spatial resolution, 2-3 sec, UIT UV images reveal a rich field of luminous UV-bright stars, clusters, and associations. There are 181 stars brighter than m2558A = 16.5 and 197 stars brighter than m1615A = 16.4 within 3 min diameter of the 30 Doradus central cluster. We have derived UV fluxes emitted from the 30 Doradus central cluster and from its UV bright core, R136. The region within 5 sec of R136 produces approximately 14% of the far-UV flux (lambda = 1892 A) and approximately 16% of the near-UV flux (lambda = 2558 A) emitted from the 3 min diameter central cluster. The derived UV luminosity of R136 at 1892 A is only 7.8 times that of the nearby O6-7 Iaf star, R139, and the m1892 - mv colors of R136 are similar to other O or Wolf-Rayet stars in the same region. These UIT data, combined with other published observations at longer wavelengths, indicate that there is no observational evidence for a supermassive star in R136.

Development of a high-throughput screening system for identification of novel reagents regulating DNA damage in human dermal fibroblasts.

PubMed

Bae, Seunghee; An, In-Sook; An, Sungkwan

2015-09-01

Ultraviolet (UV) radiation is a major inducer of skin aging and accumulated exposure to UV radiation increases DNA damage in skin cells, including dermal fibroblasts. In the present study, we developed a novel DNA repair regulating material discovery (DREAM) system for the high-throughput screening and identification of putative materials regulating DNA repair in skin cells. First, we established a modified lentivirus expressing the luciferase and hypoxanthine phosphoribosyl transferase (HPRT) genes. Then, human dermal fibroblast WS-1 cells were infected with the modified lentivirus and selected with puromycin to establish cells that stably expressed luciferase and HPRT (DREAM-F cells). The first step in the DREAM protocol was a 96-well-based screening procedure, involving the analysis of cell viability and luciferase activity after pretreatment of DREAM-F cells with reagents of interest and post-treatment with UVB radiation, and vice versa. In the second step, we validated certain effective reagents identified in the first step by analyzing the cell cycle, evaluating cell death, and performing HPRT-DNA sequencing in DREAM-F cells treated with these reagents and UVB. This DREAM system is scalable and forms a time-saving high-throughput screening system for identifying novel anti-photoaging reagents regulating DNA damage in dermal fibroblasts.

A review of snapshot multidimensional optical imaging: measuring photon tags in parallel

PubMed Central

Gao, Liang; Wang, Lihong V.

2015-01-01

Multidimensional optical imaging has seen remarkable growth in the past decade. Rather than measuring only the two-dimensional spatial distribution of light, as in conventional photography, multidimensional optical imaging captures light in up to nine dimensions, providing unprecedented information about incident photons’ spatial coordinates, emittance angles, wavelength, time, and polarization. Multidimensional optical imaging can be accomplished either by scanning or parallel acquisition. Compared with scanning-based imagers, parallel acquisition—also dubbed snapshot imaging—has a prominent advantage in maximizing optical throughput, particularly when measuring a datacube of high dimensions. Here, we first categorize snapshot multidimensional imagers based on their acquisition and image reconstruction strategies, then highlight the snapshot advantage in the context of optical throughput, and finally we discuss their state-of-the-art implementations and applications. PMID:27134340

Multiplexed high resolution soft x-ray RIXS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chuang, Y.-D.; Voronov, D.; Warwick, T.

2016-07-27

High-resolution Resonance Inelastic X-ray Scattering (RIXS) is a technique that allows us to probe the electronic excitations of complex materials with unprecedented precision. However, the RIXS process has a low cross section, compounded by the fact that the optical spectrometers used to analyze the scattered photons can only collect a small solid angle and overall have a small efficiency. Here we present a method to significantly increase the throughput of RIXS systems, by energy multiplexing, so that a complete RIXS map of scattered intensity versus photon energy in and photon energy out can be recorded simultaneously{sup 1}. This parallel acquisitionmore » scheme should provide a gain in throughput of over 100.. A system based on this principle, QERLIN, is under construction at the Advanced Light Source (ALS).« less

Structure-guided wavelength tuning in far-red fluorescent proteins

PubMed Central

Ng, Ho-Leung; Lin, Michael Z.

2017-01-01

In recent years, protein engineers have succeeded in tuning the excitation spectra of natural fluorescent proteins from green wavelengths into orange and red wavelengths, resulting in the creation of a series of fluorescent proteins with emission in the far-red portions of the optical spectrum. These results have arisen from the synergistic combination of structural knowledge of fluorescent proteins, chemical intuition, and high-throughput screening methods. Here we review structural features found in autocatalytic far-red fluorescent proteins, and discuss how they add to our understanding of the biophysical mechanisms of wavelength tuning in biological chromophores. PMID:27468111

Tenth International Colloquium on UV and X-Ray Spectroscopy of Astrophysical and Laboratory Plasmas

NASA Astrophysics Data System (ADS)

Silver, Eric H.; Kahn, Steven M.

UV and X-ray spectroscopy of astrophysical and laboratory plasmas draws interest from many disciplines. Contributions from international specialists are collected together in this book from a timely recent conference. In astrophysics, the Hubble Space Telescope, Astro 1 and ROSAT observatories are now providing UV and X-ray spectra and images of cosmic sources in unprecedented detail, while the Yohkoh mission recently collected superb data on the solar corona. In the laboratory, the development of ion-trap facilities and novel laser experiments are providing vital new data on high temperature plasmas. Recent innovations in the technology of spectroscopic instrumentation are discussed. These papers constitute an excellent up-to-date review of developments in short-wavelength spectroscopy and offer a solid introduction to its theoretical and experimental foundations. These proceedings give an up-to-date review of developments in short-wavelength spectroscopy and offer a solid introduction to its theoretical and experimental foundations. Various speakers presented some of the first results from the high resolution spectrograph on the Hubble Space Telescope, the high sensitivity far ultraviolet and X-ray spectrometers of the ASTRO 1 Observatory, the imaging X-ray spectrometer on the ROSAT Observatory, and the high resolution solar X-ray spectrometer on Yohkoh. The development of ion trap devices had brought about a revolution in laboratory investigations of atomic processes in highly charged atoms. X-ray laser experiments had not only yielded considerable insight into electron ion interactions in hot dense plasmas, but also demonstrated the versatility of laser plasmas as laboratory X-ray sources. Such measurements also motivated and led to refinements in the development of large-scale atomic and molecular codes. On the instrumental side, the design and development of the next series of very powerful short wavelength observatories had generated a large number of technological innovations in both dispersive and nondispersive spectroscopic instrumentation.

Development of High-Resolution UV-VIS Diagnostics for Space Plasma Simulation

NASA Astrophysics Data System (ADS)

Taylor, Andrew; Batishchev, Oleg

2012-10-01

Non-invasive far-UV-VIS plasma emission allows remote diagnostics of plasma, which is particularly important for space application. Accurate vacuum tank space plasma simulations require monochromators with high spectral resolution (better than 0.01A) to capture important details of atomic and ionic lines, such as Ly-alpha, etc. We are building a new system based on the previous work [1], and will discuss the development of a spectrometry system that combines a single-pass vacuum far-UV-NIR spectrometer and a tunable Fabry-Perot etalon. [4pt] [1] O. Batishchev and J.L. Cambier, Experimental Study of the Mini-Helicon Thruster, Air Force Research Laboratory Report, AFRL-RZ-ED-TR-2009-0020, 2009.

High-Resolution Genome-Wide Analysis of Irradiated (UV and γ-Rays) Diploid Yeast Cells Reveals a High Frequency of Genomic Loss of Heterozygosity (LOH) Events

PubMed Central

St. Charles, Jordan; Hazkani-Covo, Einat; Yin, Yi; Andersen, Sabrina L.; Dietrich, Fred S.; Greenwell, Patricia W.; Malc, Ewa; Mieczkowski, Piotr; Petes, Thomas D.

2012-01-01

In diploid eukaryotes, repair of double-stranded DNA breaks by homologous recombination often leads to loss of heterozygosity (LOH). Most previous studies of mitotic recombination in Saccharomyces cerevisiae have focused on a single chromosome or a single region of one chromosome at which LOH events can be selected. In this study, we used two techniques (single-nucleotide polymorphism microarrays and high-throughput DNA sequencing) to examine genome-wide LOH in a diploid yeast strain at a resolution averaging 1 kb. We examined both selected LOH events on chromosome V and unselected events throughout the genome in untreated cells and in cells treated with either γ-radiation or ultraviolet (UV) radiation. Our analysis shows the following: (1) spontaneous and damage-induced mitotic gene conversion tracts are more than three times larger than meiotic conversion tracts, and conversion tracts associated with crossovers are usually longer and more complex than those unassociated with crossovers; (2) most of the crossovers and conversions reflect the repair of two sister chromatids broken at the same position; and (3) both UV and γ-radiation efficiently induce LOH at doses of radiation that cause no significant loss of viability. Using high-throughput DNA sequencing, we also detected new mutations induced by γ-rays and UV. To our knowledge, our study represents the first high-resolution genome-wide analysis of DNA damage-induced LOH events performed in any eukaryote. PMID:22267500

Genome Engineering and Agriculture: Opportunities and Challenges.

PubMed

Baltes, Nicholas J; Gil-Humanes, Javier; Voytas, Daniel F

2017-01-01

In recent years, plant biotechnology has witnessed unprecedented technological change. Advances in high-throughput sequencing technologies have provided insight into the location and structure of functional elements within plant DNA. At the same time, improvements in genome engineering tools have enabled unprecedented control over genetic material. These technologies, combined with a growing understanding of plant systems biology, will irrevocably alter the way we create new crop varieties. As the first wave of genome-edited products emerge, we are just getting a glimpse of the immense opportunities the technology provides. We are also seeing its challenges and limitations. It is clear that genome editing will play an increased role in crop improvement and will help us to achieve food security in the coming decades; however, certain challenges and limitations must be overcome to realize the technology's full potential. © 2017 Elsevier Inc. All rights reserved.

Study of UV surface plasmons on metallic nanostructures and its applications to nanophotonics

NASA Astrophysics Data System (ADS)

Zhou, Liangcheng

Modern nanotechnology requires the characterization ability in the order of 100 nm or smaller. This resolution requirement cannot be met by using conventional optical microscopy. Nowadays, the mainstream technique that is universally adopted to characterize optical properties on this length scale is Near-field Scanning Optical Microscopy (NSOM). In the effort to improve the resolution and efficiency of NSOM techniques, both nanoscopic fabrication and imaging techniques are critical because the light field strongly intereacts with the metallic NSOM probe or other surfaces to form surface plasmons (SPs). However, much is still unknown about the behavior of light interacting with metallic nanostructures. This calls for research that develops the tool set, methodology and that includes both experimental characterization, and numerical simulations, for the investigation of SPs. The short wavelength of UV light makes it particularly desirable for many industrial processes. So far, little research has been carried out to understand surface plasmon in the UV spectral region. Like conventional optics, UV SPs have unique properties and optical behavior. For this purpose, we modified our existing NSOM into a Photon Scanning Tunneling Microscope (PTSM) and demonstrate its power for the imaging of UV SPs. We present what we believe to be the first direct mapping of the UV SPs on an Al2O3/Al surface. UV SP modes launched by one-dimensional slits or two-dimensional groove arrays and corresponding interference phenomenon were both observed. We then use the same methodology in the engineering of optimized nano aperture such as UV bowtie nanoantenna. For the latter, we find a strong UV intensity profile which is localized to less than 50nm caused by a localized surface plasmon resonance. The relationship of optical field enhancement and antenna geometric shape is studied using numerical simulations and NSOM experiments. In another project, we examine the propagation of light from near-field to far-field. For that purpose, a micro-lens with bull's-eye ring structure, similar to a Fresnel zone plate, is fabricated. We mapped the far-field light distribution from the micro-lens' output by using confocal microscope, which shows that this ring structure exhibit focusing ability as well. Furthermore, we study the ultraviolet (UV) extraordinary optical transmission through nanoslit structures into the far field as well as the localized field enhancement in the near field. The experimental results are compared to numerical modeling results showing good agreement.

Aromatic Cluster Sensor of Protein Folding: Near-UV Electronic Circular Dichroism Bands Assigned to Fold Compactness.

PubMed

Farkas, Viktor; Jákli, Imre; Tóth, Gábor K; Perczel, András

2016-09-19

Both far- and near-UV electronic circular dichroism (ECD) spectra have bands sensitive to thermal unfolding of Trp and Tyr residues containing proteins. Beside spectral changes at 222 nm reporting secondary structural variations (far-UV range), L b bands (near-UV range) are applicable as 3D-fold sensors of protein's core structure. In this study we show that both L b (Tyr) and L b (Trp) ECD bands could be used as sensors of fold compactness. ECD is a relative method and thus requires NMR referencing and cross-validation, also provided here. The ensemble of 204 ECD spectra of Trp-cage miniproteins is analysed as a training set for "calibrating" Trp↔Tyr folded systems of known NMR structure. While in the far-UV ECD spectra changes are linear as a function of the temperature, near-UV ECD data indicate a non-linear and thus, cooperative unfolding mechanism of these proteins. Ensemble of ECD spectra deconvoluted gives both conformational weights and insight to a protein folding↔unfolding mechanism. We found that the L b 293 band is reporting on the 3D-structure compactness. In addition, the pure near-UV ECD spectrum of the unfolded state is described here for the first time. Thus, ECD folding information now validated can be applied with confidence in a large thermal window (5≤T≤85 °C) compared to NMR for studying the unfolding of Trp↔Tyr residue pairs. In conclusion, folding propensities of important proteins (RNA polymerase II, ubiquitin protein ligase, tryptase-inhibitor etc.) can now be analysed with higher confidence. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Evolutionary replacement of UV vision by violet vision in fish.

PubMed

Tada, Takashi; Altun, Ahmet; Yokoyama, Shozo

2009-10-13

The vertebrate ancestor possessed ultraviolet (UV) vision and many species have retained it during evolution. Many other species switched to violet vision and, then again, some avian species switched back to UV vision. These UV and violet vision are mediated by short wavelength-sensitive (SWS1) pigments that absorb light maximally (lambda(max)) at approximately 360 and 390-440 nm, respectively. It is not well understood why and how these functional changes have occurred. Here, we cloned the pigment of scabbardfish (Lepidopus fitchi) with a lambda(max) of 423 nm, an example of violet-sensitive SWS1 pigment in fish. Mutagenesis experiments and quantum mechanical/molecular mechanical (QM/MM) computations show that the violet-sensitivity was achieved by the deletion of Phe-86 that converted the unprotonated Schiff base-linked 11-cis-retinal to a protonated form. The finding of a violet-sensitive SWS1 pigment in scabbardfish suggests that many other fish also have orthologous violet pigments. The isolation and comparison of such violet and UV pigments in fish living in different ecological habitats will open an unprecedented opportunity to elucidate not only the molecular basis of phenotypic adaptations, but also the genetics of UV and violet vision.

High temperature plasma in beta Lyrae, observed from Copernicus

NASA Technical Reports Server (NTRS)

Kondo, Y.; Hack, M.; Hutchings, J. B.; Mccluskey, G. E., Jr.; Plavec, M.; Polidan, R. S.

1975-01-01

High-resolution UV spectrophotometry of the complex close binary system beta Lyrae was performed with a telescope spectrometer on board Copernicus. Observations were made at phases 0.0, 0.25, 0.5, and 0.75 with resolutions of 0.2 A (far-UV) and 0.4 A (mid-UV). The far-UV spectrum is completely dominated by emission lines indicating the existence of a high-temperature plasma in this binary. The spectrum of this object is unlike that of any other object observed from Copernicus. It is believed that this high-temperature plasma results from dynamic mass transfer taking place in the binary. The current results are compared with OAO-2 observations and other observational results. The possibility that the secondary component is a collapsed object is also discussed; the Copernicus observations are consistent with the hypothesis that the spectroscopically invisible secondary component is a black hole.

Combined micro-Raman/UV-visible/fluorescence spectrometer for high-throughput analysis of microsamples.

PubMed

Noh, Jermim; Suh, Yung Doug; Park, Yong Ki; Jin, Seung Min; Kim, Soo Ho; Woo, Seong Ihl

2007-07-01

Combined micro-Raman/UV-visible (vis)/fluorescence spectroscopy system, which can evaluate an integrated array of more than 10,000 microsamples with a minimuma size of 5 microm within a few hours, has been developed for the first time. The array of microsamples is positioned on a computer-controlled XY translation microstage with a spatial resolution of 1 mum so that the spectra can be mapped with micron precision. Micro-Raman spectrometers have a high spectral resolution of about 2 cm(-1) over the wave number range of 150-3900 cm(-1), while UV-vis and fluorescence spectrometers have high spectral resolutions of 0.4 and 0.1 nm over the wavelength range of 190-900 nm, respectively. In particular, the signal-to-noise ratio of the micro-Raman spectroscopy has been improved by using a holographic Raman grating and a liquid-nitrogen-cooled charge-coupled device detector. The performance of the combined spectroscopy system has been demonstrated by the high-throughput screening of a combinatorial ferroelectric (i.e., BaTi(x)Zr(1-x)O(3)) library. This system makes possible the structure analysis of various materials including ferroelectrics, catalysts, phosphors, polymers, alloys, and so on for the development of novel materials and the ultrasensitive detection of trace amounts of pharmaceuticals and diagnostic agents.

Few and far between

NASA Astrophysics Data System (ADS)

Liu, Kuo; Eatough, Ralph

2017-12-01

Pulsars — fast-spinning neutron stars — are precision clocks provided by nature. Finding pulsars in the Galactic Centre orbiting Sagittarius A*, the closest supermassive black hole to the Earth, will offer unprecedented opportunities to test general relativity and its alternatives.

Nitrogen Incorporation in CH4-N2 Photochemical Aerosol Produced by Far UV Irradiation

NASA Technical Reports Server (NTRS)

Trainer, Melissa G.; Jimenez, Jose L.; Yung, Yuk L.; Toon, Owen B.; Tolbert, Margaret A.

2012-01-01

Nitrile incorporation into Titan aerosol accompanying hydrocarbon chemistry is thought to be driven by extreme UV wavelengths (lambda < 120 nm) or magnetospheric electrons in the outer reaches of the atmosphere. Far UV radiation (120 - 200 nm), which is transmitted down to the stratosphere of Titan, is expected to affect hydrocarbon chemistry only and not initiate the formation of nitrogenated species. We have examined the chemical properties of photochemical aerosol produced at far UV wavelengths using a High-Resolution Time-of-Flight Aerosol Mass Spectrometer (HR-ToF-AMS), which allows for elemental analysis of particle-phase products. Our results show that aerosol formed from CH4/N2 photochemistry contains a surprising amount of nitrogen, up to 16% by mass, a result of photolysis in the far UV. The proportion of nitrogenated organics to hydrocarbon species is shown to be correlated with that of N2 in the irradiated gas. The aerosol mass greatly decreases when N2 is removed, indicating that N2 plays a major role in aerosol production. Because direct dissociation of N2 is highly improbable given the immeasurably low cross-section at the wavelengths studied, the chemical activation of N2 must occur via another pathway. Any chemical activation of N2 at wavelengths > 120 nm is presently unaccounted for in atmospheric photochemical models. We suggest that reaction with CH radicals produced from CH4 photolysis may provide a mechanism for incorporating N into the molecular structure of the aerosol. Further work is needed to understand the chemistry involved, as these processes may have significant implications for prebiotic chemistry on the early Earth and similar planets.

University of Texas MD Anderson Cancer Center (UT-MDACC): High-Throughput Screening Identifying Driving Mutations in Endometrial Cancer | Office of Cancer Genomics

Cancer.gov

Recent advances in next-generation sequencing technology have enabled the unprecedented characterization of a full spectrum of somatic alterations in cancer genomes. Given the large numbers of somatic mutations typically detected by this approach, a key challenge in the downstream analysis is to distinguish “drivers” that functionally contribute to tumorigenesis from “passengers” that occur as the consequence of genomic instability.

Thermal Pressure in Diffuse H2 Gas Measured by Herschel [C II] Emission and FUSE UV H2 Absorption

NASA Astrophysics Data System (ADS)

Velusamy, T.; Langer, W. D.; Goldsmith, P. F.; Pineda, J. L.

2017-04-01

UV absorption studies with the Far Ultraviolet Spectroscopic Explorer (FUSE) satellite have made important observations of H2 molecular gas in Galactic interstellar translucent and diffuse clouds. Observations of the 158 μm [C II] fine-structure line with Herschel trace the same H2 molecular gas in emission. We present [C II] observations along 27 lines of sight (LOSs) toward target stars of which 25 have FUSE H2 UV absorption. Two stars have only HST STIS C II λ2325 absorption data. We detect [C II] 158 μm emission features in all but one target LOS. For three target LOSs that are close to the Galactic plane, | {\\text{}}b| < 1°, we also present position-velocity maps of [C II] emission observed by Herschel Heterodyne Instrument in the Far Infrared (HIFI) in on-the-fly spectral-line mapping. We use the velocity-resolved [C II] spectra observed by the HIFI instrument toward the target LOSs observed by FUSE to identify [C II] velocity components associated with the H2 clouds. We analyze the observed velocity integrated [C II] spectral-line intensities in terms of the densities and thermal pressures in the H2 gas using the H2 column densities and temperatures measured by the UV absorption data. We present the H2 gas densities and thermal pressures for 26 target LOSs and from the [C II] intensities derive a mean thermal pressure in the range of ˜6100-7700 K cm-3 in diffuse H2 clouds. We discuss the thermal pressures and densities toward 14 targets, comparing them to results obtained using the UV absorption data for two other tracers C I and CO. Our results demonstrate the richness of the far-IR [C II] spectral data which is a valuable complement to the UV H2 absorption data for studying diffuse H2 molecular clouds. While the UV absorption is restricted to the directions of the target star, far-IR [C II] line emission offers an opportunity to employ velocity-resolved spectral-line mapping capability to study in detail the clouds’ spatial and velocity structures.

The Behavior of Warm Molecules in Planet-forming Disks and CHESS: a Pathfinder UV Spectrograph for the LUVOIR Surveyor

NASA Astrophysics Data System (ADS)

Hoadley, Keri; France, Kevin

2017-01-01

Understanding the evolution of gas over the lifetime of protoplanetary disks provides us with important clues about how planet formation mechanisms drive the diversity of exoplanetary systems observed to date. In the first part of my talk, I will discuss how we use emission line observations of molecular hydrogen (H2) in the far-ultraviolet (far-UV) with the Cosmic Origins Spectrograph (COS) on the Hubble Space Telescope to study the warm molecular regions (a < 10 AU) of planet-forming disks. We compare the observations with analytic disk models that produce synthetic H2 profiles, and we statistically determine the disk representations that best replicate the data. I will discuss the results of our comparisons and how the modeled radial distributions of H2 in the disk help provide important constraints on the effective density of gas left in the inner disk of protoplanetary disks at various disk evolutionary stages. Finally, I will talk about follow-up studies that look to connect the warm, UV-pumped molecular populations of the inner disk to thermally-excited molecules observed in similar regions of the disk in the near- to mid-IR.In the second part of my talk, I will discuss the observational requirements in the UV and IR band passes to gain further insights into the behavior of the warm, gaseous protoplanetary disk, focusing specifically on a spectrograph concept for the next-generation LUVOIR Surveyor. I will discuss a testbed instrument, the Colorado High-resolution Echelle Stellar Spectrograph (CHESS), built as a demonstration of one component of the LUVOIR spectrograph and new technological improvements to UV optical components for the next generation of near- to far-UV astrophysical observatories. CHESS is a far-UV sounding rocket experiment designed to probe the warm and cool atoms and molecules near sites of recent star formation in the local interstellar medium. I will talk about the science goals, design, research and development (R&D) components, and calibration of the CHESS instrument. I will end by presenting the initial data reduction and results of the flight observations taken during the second launch of CHESS.

Detection of a Hot Binary Companion of eta Carinae

NASA Technical Reports Server (NTRS)

Sonnebom, G.; Iping, R. C.; Gull, T. R.; Massa, D. L.; Hillier, D. J.

2006-01-01

A hot companion of eta Carinae has been detected using high resolution spectra (905 - 1180 A) obtained with the Far Ultraviolet Spectroscopic Explorer (FUSE) satellite. Observations were obtained at two epochs of the 2024-day orbit: 2003 June during ingress to the 2003.5 X-ray eclipse and 2004 April several months after egress. These data show that essentially all the far-UV flux from eta Car shortward of Lyman alpha disappeared at least two days before the start of the X-ray eclipse (2003 June 29), implying that the hot companion, eta Car B, was also eclipsed by the dense wind or extended atmosphere of eta Car A. Analysis of the far-UV spectrum shows that eta Car B is a luminous hot star. N II 1084-1086 emission disappears at the same time as the far-UV continuum, indicating that this feature originates from eta Car B itself or in close proximity to it. The strong N II emission also raises the possibility that the companion star is nitrogen rich. The observed FUV flux levels and spectral features, combined with the timing of their disappearance, is consistent with eta Carinae being a massive binary system

Detection of a Hot Binary Companion of eta Carinae

NASA Technical Reports Server (NTRS)

Sonneborn, G.; Iping, R. C.; Gull, T. R.; Massa, D.; Hillier, D. J.

2006-01-01

A hot companion of eta Carinae has been detected using high resolution spectra (905 - 1 180 Angsroms) obtained with the Far Ultraviolet Spectroscopic Explorer (FUSE) satellite. Observations were obtained at two epochs of the 2024-day orbit: 2003 June during ingress to the 2003.5 X-ray eclipse and 2004 April several months after egress. These data show that essentially all the far-UV flux from eta Car shortward of Lyman alpha disappeared at least two days before the start of the X-ray eclipse (2003 June 29), implying that the hot companion, eta Car By was also eclipsed by the dense wind or extended atmosphere of eta Car A. Analysis of the far-UV spectrum shows that eta Car B is a luminous hot star. N II 1084-1086 emission disappears at the same time as the far-UV continuum, indicating that this feature originates from eta Car B itself or in close proximity to it. The strong N II emission also raises the possibility that the companion star is nitrogen rich. The observed FUV flux levels and spectral features, combined with the timing of their disappearance, are consistent with eta Carinae being a massive binary system.

Cameras on the moon with Apollos 15 and 16.

NASA Technical Reports Server (NTRS)

Page, T.

1972-01-01

Description of the cameras used for photography and television by Apollo 15 and 16 missions, covering a hand-held Hasselblad camera for black and white panoramic views at locations visited by the astronauts, a special stereoscopic camera designed by astronomer Tom Gold, a 16-mm movie camera used on the Apollo 15 and 16 Rovers, and several TV cameras. Details are given on the far-UV camera/spectrograph of the Apollo 16 mission. An electronographic camera converts UV light to electrons which are ejected by a KBr layer at the focus of an f/1 Schmidt camera and darken photographic films much more efficiently than far-UV. The astronomical activity of the Apollo 16 astronauts on the moon, using this equipment, is discussed.

The use of wavelength-selective plastic cladding materials in horticulture: understanding of crop and fungal responses through the assessment of biological spectral weighting functions.

PubMed

Paul, Nigel D; Jacobson, Rob J; Taylor, Anna; Wargent, Jason J; Moore, Jason P

2005-01-01

Plant responses to light spectral quality can be exploited to deliver a range of agronomically desirable end points in protected crops. This can be achieved using plastics with specific spectral properties as crop covers. We have studied the responses of a range of crops to plastics that have either (a) increased transmission of UV compared with standard horticultural covers, (b) decreased transmission of UV or (c) increased the ratio of red (R) : far-red (FR) radiation. Both the UV-transparent and R : FR increasing films reduced leaf area and biomass, offering potential alternatives to chemical growth regulators. The UV-opaque film increased growth, but while this may be useful in some crops, there were trade-offs with elements of quality, such as pigmentation and taste. UV manipulation may also influence disease control. Increasing UV inhibited not only the pathogenic fungus Botrytis cinerea but also the disease biocontrol agent Trichoderma harzianum. Unlike B. cinerea, T. harzianum was highly sensitive to UV-A radiation. These fungal responses and those for plant growth in the growth room and the field under different plastics are analyzed in terms of alternative biological spectral weighting functions (BSWF). The role of BSWF in assessing general patterns of response to UV modification in horticulture is also discussed.

Light-emitting Ga-oxide nanocrystals in glass: a new paradigm for low-cost and robust UV-to-visible solar-blind converters and UV emitters.

PubMed

Sigaev, Vladimir N; Golubev, Nikita V; Ignat'eva, Elena S; Paleari, Alberto; Lorenzi, Roberto

2014-01-01

Wide-bandgap nanocrystals are an inexhaustible source of tuneable functions potentially addressing most of the demand for new light emitting systems. However, the implementation of nanocrystal properties in real devices is not straightforward if a robust and stable optical component is required as a final result. The achievement of efficient light emission from dense dispersions of Ga-oxide nanocrystals in UV-grade glass can be a breakthrough in this regard. Such a result would permit the fabrication of low cost UV-to-visible converters for monitoring UV-emitting events on a large-scale - from invisible hydrogen flames to corona dispersions. From this perspective, γ-Ga₂O₃ nanocrystals are developed by phase separation in Ga-alkali-germanosilicate glasses, obtaining optical materials based on a UV transparent matrix. Band-to-band UV-excitation of light emission from donor-acceptor pair (DAP) recombination is investigated for the first time in embedded γ-Ga₂O₃. The analysis of the decay kinetics gives unprecedented evidence that nanosized confinement of DAP recombination can force a nanophase to the efficient response of exactly balanced DAPs. The results, including a proof of concept of UV-to-visible viewer, definitely demonstrate the feasibility of workable glass-based fully inorganic nanostructured materials with emission properties borrowed from Ga₂O₃ single-crystals and tailored by the nanocrystal size.

Optical-to-UV correlations and particle fluxes for M dwarf exoplanet host stars

NASA Astrophysics Data System (ADS)

Youngblood, Allison

2017-01-01

UV stellar radiation can significantly impact planetary atmospheres through heating and photochemistry, even regulating production of potential biomarkers. M dwarfs emit the majority of their UV radiation in the form of emission lines, and the incident UV radiation on habitable-zone planets is significant owing to their small orbital radii. Only recently have the UV spectral energy distributions (SEDs) of average M dwarfs been explored (e.g., the MUSCLES Treasury Survey). Emission lines tracing hot plasma in the stellar chromosphere and transition region dominate the far-UV spectra, even for optically inactive M dwarfs (i.e., those displaying Hα absorption spectra). Lyα (1216 Å) is the strongest of the UV emission lines, but resonant scattering from the interstellar medium makes direct observations of the intrinsic Lyα emission of even nearby stars challenging. I reconstruct the intrinsic Lyα profiles using an MCMC technique and use them to estimate the extreme-UV SED.Monitoring the long-term (years-to-decades) UV activity of M dwarfs will be important for assessing the potential habitability of short-period planets, but will only be feasible from the ground via optical proxies. Therefore, I also quantify correlations between UV and optical emission lines of the MUSCLES stars and other M dwarfs, for use when direct UV observations of M dwarf exoplanet host stars are not available. Recent habitability studies of M dwarf exoplanets have sought to address the impact of frequent flaring and are just beginning to include the damaging impact of stellar energetic particles that are typically associated with large flares. Working under the necessary assumption of solar-like particle production, I present a new technique for estimating >10 MeV proton flux during far-UV flares, and analyze a sample of the flares observed in the MUSCLES Treasury Survey.

Automation of fluorescent differential display with digital readout.

PubMed

Meade, Jonathan D; Cho, Yong-Jig; Fisher, Jeffrey S; Walden, Jamie C; Guo, Zhen; Liang, Peng

2006-01-01

Since its invention in 1992, differential display (DD) has become the most commonly used technique for identifying differentially expressed genes because of its many advantages over competing technologies such as DNA microarray, serial analysis of gene expression (SAGE), and subtractive hybridization. Despite the great impact of the method on biomedical research, there has been a lack of automation of DD technology to increase its throughput and accuracy for systematic gene expression analysis. Most of previous DD work has taken a "shot-gun" approach of identifying one gene at a time, with a limited number of polymerase chain reaction (PCR) reactions set up manually, giving DD a low-tech and low-throughput image. We have optimized the DD process with a new platform that incorporates fluorescent digital readout, automated liquid handling, and large-format gels capable of running entire 96-well plates. The resulting streamlined fluorescent DD (FDD) technology offers an unprecedented accuracy, sensitivity, and throughput in comprehensive and quantitative analysis of gene expression. These major improvements will allow researchers to find differentially expressed genes of interest, both known and novel, quickly and easily.

Efficient mouse genome engineering by CRISPR-EZ technology.

PubMed

Modzelewski, Andrew J; Chen, Sean; Willis, Brandon J; Lloyd, K C Kent; Wood, Joshua A; He, Lin

2018-06-01

CRISPR/Cas9 technology has transformed mouse genome editing with unprecedented precision, efficiency, and ease; however, the current practice of microinjecting CRISPR reagents into pronuclear-stage embryos remains rate-limiting. We thus developed CRISPR ribonucleoprotein (RNP) electroporation of zygotes (CRISPR-EZ), an electroporation-based technology that outperforms pronuclear and cytoplasmic microinjection in efficiency, simplicity, cost, and throughput. In C57BL/6J and C57BL/6N mouse strains, CRISPR-EZ achieves 100% delivery of Cas9/single-guide RNA (sgRNA) RNPs, facilitating indel mutations (insertions or deletions), exon deletions, point mutations, and small insertions. In a side-by-side comparison in the high-throughput KnockOut Mouse Project (KOMP) pipeline, CRISPR-EZ consistently outperformed microinjection. Here, we provide an optimized protocol covering sgRNA synthesis, embryo collection, RNP electroporation, mouse generation, and genotyping strategies. Using CRISPR-EZ, a graduate-level researcher with basic embryo-manipulation skills can obtain genetically modified mice in 6 weeks. Altogether, CRISPR-EZ is a simple, economic, efficient, and high-throughput technology that is potentially applicable to other mammalian species.

High Throughput, Polymeric Aqueous Two-Phase Printing of Tumor Spheroids

PubMed Central

Atefi, Ehsan; Lemmo, Stephanie; Fyffe, Darcy; Luker, Gary D.; Tavana, Hossein

2014-01-01

This paper presents a new 3D culture microtechnology for high throughput production of tumor spheroids and validates its utility for screening anti-cancer drugs. We use two immiscible polymeric aqueous solutions and microprint a submicroliter drop of the “patterning” phase containing cells into a bath of the “immersion” phase. Selecting proper formulations of biphasic systems using a panel of biocompatible polymers results in the formation of a round drop that confines cells to facilitate spontaneous formation of a spheroid without any external stimuli. Adapting this approach to robotic tools enables straightforward generation and maintenance of spheroids of well-defined size in standard microwell plates and biochemical analysis of spheroids in situ, which is not possible with existing techniques for spheroid culture. To enable high throughput screening, we establish a phase diagram to identify minimum cell densities within specific volumes of the patterning drop to result in a single spheroid. Spheroids show normal growth over long-term incubation and dose-dependent decrease in cellular viability when treated with drug compounds, but present significant resistance compared to monolayer cultures. The unprecedented ease of implementing this microtechnology and its robust performance will benefit high throughput studies of drug screening against cancer cells with physiologically-relevant 3D tumor models. PMID:25411577

Development and validation of a FIA/UV-vis method for pK(a) determination of oxime based acetylcholinesterase reactivators.

PubMed

Musil, Karel; Florianova, Veronika; Bucek, Pavel; Dohnal, Vlastimil; Kuca, Kamil; Musilek, Kamil

2016-01-05

Acetylcholinesterase reactivators (oximes) are compounds used for antidotal treatment in case of organophosphorus poisoning. The dissociation constants (pK(a1)) of ten standard or promising acetylcholinesterase reactivators were determined by ultraviolet absorption spectrometry. Two methods of spectra measurement (UV-vis spectrometry, FIA/UV-vis) were applied and compared. The soft and hard models for calculation of pK(a1) values were performed. The pK(a1) values were recommended in the range 7.00-8.35, where at least 10% of oximate anion is available for organophosphate reactivation. All tested oximes were found to have pK(a1) in this range. The FIA/UV-vis method provided rapid sample throughput, low sample consumption, high sensitivity and precision compared to standard UV-vis method. The hard calculation model was proposed as more accurate for pK(a1) calculation. Copyright © 2015 Elsevier B.V. All rights reserved.

RIPiT-Seq: A high-throughput approach for footprinting RNA:protein complexes

PubMed Central

Singh, Guramrit; Ricci, Emiliano P.; Moore, Melissa J.

2013-01-01

Development of high-throughput approaches to map the RNA interaction sites of individual RNA binding proteins (RBPs) transcriptome-wide is rapidly transforming our understanding of post-transcriptional gene regulatory mechanisms. Here we describe a ribonucleoprotein (RNP) footprinting approach we recently developed for identifying occupancy sites of both individual RBPs and multi-subunit RNP complexes. RNA:protein immunoprecipitation in tandem (RIPiT) yields highly specific RNA footprints of cellular RNPs isolated via two sequential purifications; the resulting RNA footprints can then be identified by high-throughput sequencing (Seq). RIPiT-Seq is broadly applicable to all RBPs regardless of their RNA binding mode and thus provides a means to map the RNA binding sites of RBPs with poor inherent ultraviolet (UV) crosslinkability. Further, among current high-throughput approaches, RIPiT has the unique capacity to differentiate binding sites of RNPs with overlapping protein composition. It is therefore particularly suited for studying dynamic RNP assemblages whose composition evolves as gene expression proceeds. PMID:24096052

High-throughput screening of filamentous fungi using nanoliter-range droplet-based microfluidics

NASA Astrophysics Data System (ADS)

Beneyton, Thomas; Wijaya, I. Putu Mahendra; Postros, Prexilia; Najah, Majdi; Leblond, Pascal; Couvent, Angélique; Mayot, Estelle; Griffiths, Andrew D.; Drevelle, Antoine

2016-06-01

Filamentous fungi are an extremely important source of industrial enzymes because of their capacity to secrete large quantities of proteins. Currently, functional screening of fungi is associated with low throughput and high costs, which severely limits the discovery of novel enzymatic activities and better production strains. Here, we describe a nanoliter-range droplet-based microfluidic system specially adapted for the high-throughput sceening (HTS) of large filamentous fungi libraries for secreted enzyme activities. The platform allowed (i) compartmentalization of single spores in ~10 nl droplets, (ii) germination and mycelium growth and (iii) high-throughput sorting of fungi based on enzymatic activity. A 104 clone UV-mutated library of Aspergillus niger was screened based on α-amylase activity in just 90 minutes. Active clones were enriched 196-fold after a single round of microfluidic HTS. The platform is a powerful tool for the development of new production strains with low cost, space and time footprint and should bring enormous benefit for improving the viability of biotechnological processes.

Big Data in the SHELA Field: Investigating Galaxy Quenching at High Redshifts

NASA Astrophysics Data System (ADS)

Stevans, Matthew L.; Finkelstein, Steven L.; Wold, Isak; Kawinwanichakij, Lalitwadee; Sherman, Sydney; Gebhardt, Karl; Jogee, Shardha; Papovich, Casey J.; Ciardullo, Robin; Gronwall, Caryl; Gawiser, Eric J.; Acquaviva, Viviana; Casey, Caitlin; Florez, Jonathan; HETDEX Team

2017-06-01

We present a measurement of the z ~ 4 Lyman break galaxy (LBG) rest-frame UV luminosity function to investigate the onset of quenching in the early universe. The bright-end of the galaxy luminosity function typically shows an exponential decline far steeper than that of the underlying halo mass function. This is typically attributed to negative feedback from past active galactic nuclei (AGN) activity as well as dust attenuation. Constraining the abundance of bright galaxies at early times (z > 3) can provide a key insight into the mechanisms regulating star formation in galaxies. However, existing studies suffer from low number statistics and/or the inability to robustly remove stellar and AGN contaminants. In this study we take advantage of the unprecedentedly large (24 deg^2) Spitzer/HETDEX Exploratory Large Area (SHELA) field and its deep multi-wavelength photometry, which includes DECam ugriz, NEWFIRM K-band, Spitzer/IRAC, Herschel/SPIRE, and X-ray from XMM-Newton and Chandra. With SHELA’s deep imaging over a large area we are uniquely positioned to study statistically significant samples of massive galaxies at high redshifts (z > 3) when the first massive galaxies began quenching. We select our sample using photometric redshifts from the EAZY software package (Brammer et al. 2008) based on the optical and far-infrared imaging. We directly identify and remove stellar contaminants and AGN with IRAC colors and X-ray detections, respectively. By pinning down the exact shape of the bright-end of the z ~ 4 LBG luminosity function, we provide the deepest probe yet into the baryonic physics dominating star formation and quenching in the early universe.

HAZMAT. I. The evolution of far-UV and near-UV emission from early M stars

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shkolnik, Evgenya L.; Barman, Travis S., E-mail: shkolnik@lowell.edu, E-mail: barman@lpl.arizona.edu

2014-10-01

The spectral energy distribution, variability, and evolution of the high-energy radiation from an M dwarf planet host is crucial in understanding the planet's atmospheric evolution and habitability and in interpreting the planet's spectrum. The star's extreme-UV (EUV), far-UV (FUV), and near-UV (NUV) emission can chemically modify, ionize, and erode the atmosphere over time. This makes determining the lifetime exposure of such planets to stellar UV radiation critical for both the evolution of a planet's atmosphere and our potential to characterize it. Using the early M star members of nearby young moving groups, which sample critical ages in planet formation andmore » evolution, we measure the evolution of the GALEX NUV and FUV flux as a function of age. The median UV flux remains at a 'saturated' level for a few hundred million years, analogous to that observed for X-ray emission. By the age of the Hyades Cluster (650 Myr), we measure a drop in UV flux by a factor of 2-3 followed by a steep drop from old (several Gyrs) field stars. This decline in activity beyond 300 Myr follows roughly t {sup –1}. Despite this clear evolution, there remains a wide range, of 1-2 orders of magnitude, in observed emission levels at every age. These UV data supply the much-needed constraints to M dwarf upper-atmosphere models, which will provide empirically motivated EUV predictions and more accurate age-dependent UV spectra as inputs to planetary photochemical models.« less

Integrating ecology into biotechnology.

PubMed

McMahon, Katherine D; Martin, Hector Garcia; Hugenholtz, Philip

2007-06-01

New high-throughput culture-independent molecular tools are allowing the scientific community to characterize and understand the microbial communities underpinning environmental biotechnology processes in unprecedented ways. By creatively leveraging these new data sources, microbial ecology has the potential to transition from a purely descriptive to a predictive framework, in which ecological principles are integrated and exploited to engineer systems that are biologically optimized for the desired goal. But to achieve this goal, ecology, engineering and microbiology curricula need to be changed from the very root to better promote interdisciplinarity.

Leveraging advances in biology to design biomaterials

NASA Astrophysics Data System (ADS)

Darnell, Max; Mooney, David J.

2017-12-01

Biomaterials have dramatically increased in functionality and complexity, allowing unprecedented control over the cells that interact with them. From these engineering advances arises the prospect of improved biomaterial-based therapies, yet practical constraints favour simplicity. Tools from the biology community are enabling high-resolution and high-throughput bioassays that, if incorporated into a biomaterial design framework, could help achieve unprecedented functionality while minimizing the complexity of designs by identifying the most important material parameters and biological outputs. However, to avoid data explosions and to effectively match the information content of an assay with the goal of the experiment, material screens and bioassays must be arranged in specific ways. By borrowing methods to design experiments and workflows from the bioprocess engineering community, we outline a framework for the incorporation of next-generation bioassays into biomaterials design to effectively optimize function while minimizing complexity. This framework can inspire biomaterials designs that maximize functionality and translatability.

Europa in the Far-UV: Spatial and Spectral Analysis from HST Observations

NASA Astrophysics Data System (ADS)

Becker, Tracy M.; Retherford, Kurt D.; Roth, Lorenz; Hendrix, Amanda R.; McGrath, Melissa; Alday, Juan; Saur, Joachim; Molyneux, Philippa M.; Raut, Ujjwal; Teolis, Benjamin

2017-10-01

We present a spatial and spectral analysis of Europa using far-UV observations from 1999 - 2015 made by the Space Telescope Imaging Spectrograph (STIS) on the Hubble Space Telescope (HST). Disk-integrated observations show that the far-UV spectrum from ~130 nm - 170 nm is blue (increasing albedo with decreasing wavelength) for the studied hemispheres: the leading, trailing, and anti-Jovian hemispheres. At Lyman-alpha (121.6 nm), the albedo of the trailing hemisphere continues the blue trend, but it reddens for the leading hemisphere. At wavelengths shorter than 133.5 nm, the leading hemisphere, which is brighter than the trailing hemisphere at near-UV and visible wavelengths, becomes darker than the trailing hemisphere. We find no evidence of a sharp water-ice absorption edge at 165 nm on any hemisphere of Europa, which is intriguing since such an absorption feature has been observed on most icy moons. This suggests the possibility that radiolytic alteration by Jovian magnetospheric plasma has made the surface more strongly absorbing, masking the absorption edge. We will also present a spatial map of Lyman-alpha across the entire surface of Europa. This map can then be used to distinguish variable H emissions in the atmosphere from surface reflectance, improving our ability to detect potential plumes occurring on the disk of Europa during an observation.

Investigation of coronal holes in the radio and far-ultraviolet ranges

NASA Technical Reports Server (NTRS)

Sheridan, K. V.; Smerd, S. F.

1977-01-01

Results of coronal-hole observations carried out in the far-UV with a spectro-heliometer aboard Skylab are compared with corresponding results of ground-based radioheliograph measurements performed at frequencies of 80 and 160 MHz. It is found that the electron density derived from the far-UV observations for the transition region and lower corona is nearly three times greater than the value computed on the basis of the radio data. Unsuccessful attempts are made to eliminate this discrepancy by recalibrating the radio data and by recalculating the ionization equilibrium. A substantial local enhancement of the heavy-element abundance in certain parts of the transition region and inner chromosphere is considered as a possible cause of the discrepancy.

Reduction of patulin in apple cider by UV radiation.

PubMed

Dong, Qingfang; Manns, David C; Feng, Guoping; Yue, Tianli; Churey, John J; Worobo, Randy W

2010-01-01

The presence of the mycotoxin patulin in processed apple juice and cider presents a continual challenge to the food industry as both consumer health and product quality issues. Although several methods for control and/or elimination of patulin have been proposed, no unifying method has been commercially successful for reducing patulin burdens while maintaining product quality. In the present study, exposure to germicidal UV radiation was evaluated as a possible commercially viable alternative for the reduction and possible elimination of the patulin mycotoxin in fresh apple cider. UV exposure of 14.2 to 99.4 mJ/cm(2) resulted in a significant and nearly linear decrease in patulin levels while producing no quantifiable changes in the chemical composition (i.e., pH, Brix, and total acids) or organoleptic properties of the cider. For the range of UV doses tested, patulin levels decreased by 9.4 to 43.4%; the greatest reduction was achieved after less than 15 s of UV exposure. The method of UV radiation (the CiderSure 3500 system) is an easily implemented, high-throughput, and cost-effective method that offers simultaneous UV pasteurization of cider and juice products and reduction and/or elimination of patulin without unwanted alterations in the final product.

Design for an 8 Meter Monolithic UV/OIR Space Telescope

NASA Technical Reports Server (NTRS)

Stahl, H. Philip; Postman, Marc; Hornsby, Linda; Hopkins, Randall; Mosier, Gary E.; Pasquale, Bert A.; Arnold, William R.

2009-01-01

ATLAST-8 is an 8-meter monolithic UV/optical/NIR space observatory to be placed in orbit at Sun-Earth L2 by NASA's planned Ares V cargo launch vehicle. The ATLAST-8 will yield fundamental astronomical breakthroughs. The mission concept utilizes two enabling technologies: planned Ares-V launch vehicle (scheduled for 2019) and autonomous rendezvous and docking (AR&D). The unprecedented Ares-V payload and mass capacity enables the use of a massive, monolithic, thin-meniscus primary mirror - similar to a VLT or Subaru. Furthermore, it enables simple robust design rules to mitigate cost, schedule and performance risk. AR&D enables on-orbit servicing, extending mission life and enhancing science return.

M dwarf energetic proton flux on exoplanets during flares: estimates using solar UV-proton relations

NASA Astrophysics Data System (ADS)

Youngblood, Allison, France; Kevin; Mason, James P.

2016-10-01

UV and X-ray stellar radiation impacts planetary atmospheres through heating and photochemistry, even regulating production of potential biomarkers. The surface conditions on M dwarf planets are not greatly affected by flares in the emission line-dominated far-UV spectra of M dwarfs (M < 0.5 Msun), however, theoretical investigations have largely ignored the additional influence of stellar energetic particles (SEPs) released during flares. Magnetospheric compression and atmospheric stripping by SEPs could allow life-damaging (or catalyzing) radiation to reach the planetary surface and cause atmospheric heating closer to the surface. For the sun, a relationship between >10 MeV proton flux and 1-8 Å irradiance has been established with data from the GOES satellites (Belov et al. 2005), however, only a few X-ray observations of M-dwarf flares covering the complete 1-8 Å bandpass exist. Current M dwarf SEP estimates (Segura et al. 2010) employ the Neupert effect to first estimate the average X-ray flux over a broad band (1-62 Å) from the observed near- and far-UV flare flux (Mitra-Kraev et al. 2005). To improve the quality of proton flux estimates, we have analyzed the GOES >10 MeV observed proton flux and SDO EVE's solar spectral irradiance measurements to define relationships between SEPs and extreme-UV emission lines with formation temperatures similar to far-UV lines directly accessible by the Hubble Space Telescope (HST). Under the necessary assumption that an M dwarf's SEP production mechanism is similar to the sun's, we estimate SEP fluxes during M-dwarf flares observed with HST as part of the MUSCLES (Measurements of the Ultraviolet Spectral Characteristics of Low-mass Exoplanetary Systems) Treasury Survey.

Optical spectroscopic methods for probing the conformational stability of immobilised enzymes.

PubMed

Ganesan, Ashok; Moore, Barry D; Kelly, Sharon M; Price, Nicholas C; Rolinski, Olaf J; Birch, David J S; Dunkin, Ian R; Halling, Peter J

2009-07-13

We report the development of biophysical techniques based on circular dichroism (CD), diffuse reflectance infrared Fourier transform (DRIFT) and tryptophan (Trp) fluorescence to investigate in situ the structure of enzymes immobilised on solid particles. Their applicability is demonstrated using subtilisin Carlsberg (SC) immobilised on silica gel and Candida antartica lipase B immobilised on Lewatit VP.OC 1600 (Novozyme 435). SC shows nearly identical secondary structure in solution and in the immobilised state as evident from far UV CD spectra and amide I vibration bands. Increased near UV CD intensity and reduced Trp fluorescence suggest a more rigid tertiary structure on the silica surface. After immobilised SC is inactivated, these techniques reveal: a) almost complete loss of near UV CD signal, suggesting loss of tertiary structure; b) a shift in the amide I vibrational band from 1658 cm(-1) to 1632 cm(-1), indicating a shift from alpha-helical structure to beta-sheet; c) a substantial blue shift and reduced dichroism in the far UV CD, supporting a shift to beta-sheet structure; d) strong increase in Trp fluorescence intensity, which reflects reduced intramolecular quenching with loss of tertiary structure; and e) major change in fluorescence lifetime distribution, confirming a substantial change in Trp environment. DRIFT measurements suggest that pressing KBr discs may perturb protein structure. With the enzyme on organic polymer it was possible to obtain near UV CD spectra free of interference by the carrier material. However, far UV CD, DRIFT and fluorescence measurements showed strong signals from the organic support. In conclusion, the spectroscopic methods described here provide structural information hitherto inaccessible, with their applicability limited by interference from, rather than the particulate nature of, the support material.

Spectroscopic Measurements of the Far-Ultraviolet Dust Attenuation Curve at z ˜ 3

NASA Astrophysics Data System (ADS)

Reddy, Naveen A.; Steidel, Charles C.; Pettini, Max; Bogosavljević, Milan

2016-09-01

We present the first spectroscopic measurements of the shape of the far-ultraviolet (far-UV; λ =950{--}1500 Å) dust attenuation curve at high redshift (z˜ 3). Our analysis employs rest-frame UV spectra of 933 galaxies at z˜ 3, 121 of which have very deep spectroscopic observations (≳ 7 hr) at λ =850{--}1300 \\mathring{{A}} , with the Low Resolution Imaging Spectrograph on the Keck Telescope. By using an iterative approach in which we calculate the ratios of composite spectra in different bins of continuum color excess, E(B-V), we derive a dust curve that implies a lower attenuation in the far-UV for a given E(B-V) than those obtained with standard attenuation curves. We demonstrate that the UV composite spectra of z˜ 3 galaxies can be modeled well by assuming our new attenuation curve, a high covering fraction of H I, and absorption from the Lyman-Werner bands of {{{H}}}2 with a small (≲ 20 % ) covering fraction. The low covering fraction of {{{H}}}2 relative to that of the {{H}} {{I}} and dust suggests that most of the dust in the ISM of typical galaxies at z˜ 3 is unrelated to the catalysis of {{{H}}}2, and is associated with other phases of the ISM (I.e., the ionized and neutral gas). The far-UV dust curve implies a factor of ≈ 2 lower dust attenuation of Lyman continuum (ionizing) photons relative to those inferred from the most commonly assumed attenuation curves for L* galaxies at z˜ 3. Our results may be utilized to assess the degree to which ionizing photons are attenuated in H II regions or, more generally, in the ionized or low column density (N({{H}} {{I}})≲ {10}17.2 cm-2) neutral ISM of high-redshift galaxies. Based on data obtained at the W.M. Keck Observatory, which is operated as a scientific partnership among the California Institute of Technology, the University of California, and NASA, and was made possible by the generous financial support of the W.M. Keck Foundation.

Juno-UVS observation of the Io footprint: Influence of Io's local environment and passage into eclipse on the strength of the interaction

NASA Astrophysics Data System (ADS)

Hue, V.; Gladstone, R.; Greathouse, T. K.; Versteeg, M.; Bonfond, B.; Saur, J.; Davis, M. W.; Roth, L.; Grodent, D. C.; Gerard, J. C. M. C.; Kammer, J.; Bolton, S. J.; Levin, S.; Connerney, J. E. P.

2017-12-01

The Juno mission offers an unprecedented opportunity to study Jupiter, from its internal structure to its magnetospheric environment. Juno-UVS is a UV spectrograph with a bandpass of 70<λ<205 nm, built to characterize Jupiter's UV emissions and provide remote sensing capacities for the onboard fields and particle instruments (MAG, Waves, JADE and JEDI). Juno's orbit allows observing Jupiter from a unique vantage point above the poles. In particular, UVS has observed the instantaneous Io footprint and extended tail as Io enters into eclipse. This observation may better constrain whether the atmosphere of Io is sustained via volcanic activity or sublimation. Among other processes, the modulation of Io's footprint brightness correlates to the strength of the interaction between the Io plasma torus and its ionosphere, which, in turn, is likely to be affected by the atmospheric collapse. UVS observed the Io footprint during two eclipses that occurred on PJ1 and PJ3, and one additional eclipse observation is planned during PJ9 (24 Oct. 2017). We present how the electrodynamic coupling between Io and Jupiter is influenced by changes in Io's local environment, e.g. Io's passage in and out of eclipse and Io's traverse of the magnetodisc plasma sheet.

Printable Solid-State Lithium-Ion Batteries: A New Route toward Shape-Conformable Power Sources with Aesthetic Versatility for Flexible Electronics.

PubMed

Kim, Se-Hee; Choi, Keun-Ho; Cho, Sung-Ju; Choi, Sinho; Park, Soojin; Lee, Sang-Young

2015-08-12

Forthcoming flexible/wearable electronic devices with shape diversity and mobile usability garner a great deal of attention as an innovative technology to bring unprecedented changes in our daily lives. From the power source point of view, conventional rechargeable batteries (one representative example is a lithium-ion battery) with fixed shapes and sizes have intrinsic limitations in fulfilling design/performance requirements for the flexible/wearable electronics. Here, as a facile and efficient strategy to address this formidable challenge, we demonstrate a new class of printable solid-state batteries (referred to as "PRISS batteries"). Through simple stencil printing process (followed by ultraviolet (UV) cross-linking), solid-state composite electrolyte (SCE) layer and SCE matrix-embedded electrodes are consecutively printed on arbitrary objects of complex geometries, eventually leading to fully integrated, multilayer-structured PRISS batteries with various form factors far beyond those achievable by conventional battery technologies. Tuning rheological properties of SCE paste and electrode slurry toward thixotropic fluid characteristics, along with well-tailored core elements including UV-cured triacrylate polymer and high boiling point electrolyte, is a key-enabling technology for the realization of PRISS batteries. This process/material uniqueness allows us to remove extra processing steps (related to solvent drying and liquid-electrolyte injection) and also conventional microporous separator membranes, thereupon enabling the seamless integration of shape-conformable PRISS batteries (including letters-shaped ones) into complex-shaped objects. Electrochemical behavior of PRISS batteries is elucidated via an in-depth analysis of cell impedance, which provides a theoretical basis to enable sustainable improvement of cell performance. We envision that PRISS batteries hold great promise as a reliable and scalable platform technology to open a new concept of cell architecture and fabrication route toward flexible power sources with exceptional shape conformability and aesthetic versatility.

Mirror coatings for large aperture UV optical infrared telescope optics

NASA Astrophysics Data System (ADS)

Balasubramanian, Kunjithapatham; Hennessy, John; Raouf, Nasrat; Nikzad, Shouleh; Del Hoyo, Javier; Quijada, Manuel

2017-09-01

Large space telescope concepts such as LUVOIR and HabEx aiming for observations from far UV to near IR require advanced coating technologies to enable efficient gathering of light with important spectral signatures including those in far UV region down to 90nm. Typical Aluminum mirrors protected with MgF2 fall short of the requirements below 120nm. New and improved coatings are sought to protect aluminum from oxidizing readily in normal environment causing severe absorption and reduction of reflectance in the deep UV. Choice of materials and the process of applying coatings present challenges. Here we present the progress achieved to date with experimental investigations of coatings at JPL and at GSFC and discuss the path forward to achieve high reflectance in the spectral region from 90 to 300nm without degrading performance in the visible and NIR regions taking into account durability concerns when the mirrors are exposed to normal laboratory environment as well as high humidity conditions. Reflectivity uniformity required on these mirrors is also discussed.

Pollen and spores as biological recorders of past ultraviolet irradiance.

NASA Astrophysics Data System (ADS)

Fraser, Wesley; Jardine, Phillip; Lomax, Barry; Sephton, Mark; Shanahan, Timothy; Miller, Charlotte; Gosling, William

2017-04-01

Ultraviolet (UV) irradiance from the Sun is a key driver of climatic and biotic change. UV irradiance modulates processes in the stratosphere, and influences the biosphere from ecosystem-level through to the largest scale patterns of diversification and extinction. Yet our understanding of UV irradiance is limited to the present; no validated empirical method exists to reconstruct UV flux over long, geologically relevant timescales. Here, we show that a recently developed proxy for UV irradiance based on spore and pollen chemistry can be used over long (100,000 years) timescales. First, we demonstrate spatial variation in spore and pollen chemistry correlate with known latitudinal solar irradiance gradients. Second, using this relationship we provide a reconstruction of past changes in solar irradiance based on the pollen record obtained from Lake Bosumtwi in Ghana. Variations in the chemistry of grass pollen from the Lake Bosumtwi record show a link to multiple orbital precessional cycles (19-21,000 years). By providing a unique, local proxy for broad spectrum solar irradiance, the chemical analysis of spores and pollen offers unprecedented opportunities to decouple solar variability, climate and vegetation change through geologic time and a new proxy with which to probe the Earth system.

Application of a high-throughput relative chemical stability assay to screen therapeutic protein formulations by assessment of conformational stability and correlation to aggregation propensity.

PubMed

Rizzo, Joseph M; Shi, Shuai; Li, Yunsong; Semple, Andrew; Esposito, Jessica J; Yu, Shenjiang; Richardson, Daisy; Antochshuk, Valentyn; Shameem, Mohammed

2015-05-01

In this study, an automated high-throughput relative chemical stability (RCS) assay was developed in which various therapeutic proteins were assessed to determine stability based on the resistance to denaturation post introduction to a chaotrope titration. Detection mechanisms of both intrinsic fluorescence and near UV circular dichroism (near-UV CD) are demonstrated. Assay robustness was investigated by comparing multiple independent assays and achieving r(2) values >0.95 for curve overlays. The complete reversibility of the assay was demonstrated by intrinsic fluorescence, near-UV CD, and biologic potency. To highlight the method utility, we compared the RCS assay with differential scanning calorimetry and dynamic scanning fluorimetry methodologies. Utilizing C1/2 values obtained from the RCS assay, formulation rank-ordering of 12 different mAb formulations was performed. The prediction of long-term stability on protein aggregation is obtained by demonstrating a good correlation with an r(2) of 0.83 between RCS and empirical aggregation propensity data. RCS promises to be an extremely useful tool to aid in candidate formulation development efforts based on the complete reversibility of the method to allow for multiple assessments without protein loss and the strong correlation between the C1/2 data obtained and accelerated stability under stressed conditions. © 2015 Wiley Periodicals, Inc. and the American Pharmacists Association.

A novel procedure to assess the non-enzymatic hydrogen-peroxide antioxidant capacity of metabolites with high UV absorption.

PubMed

Csepregi, Kristóf; Hideg, Éva

2016-12-01

Assays assessing non-enzymatic hydrogen peroxide antioxidant capacities are often hampered by the high UV absorption of the sample itself. This is a typical problem in studies using plant extracts with high polyphenol content. Our assay is based on comparing the 405 nm absorption of the product of potassium iodine and hydrogen peroxide in the presence and absence of a putative hydrogen peroxide reactive antioxidant. This method is free of interference with either hydrogen peroxide or antioxidant self-absorption and it is also suitable for high-throughput plate reader applications.

Evolution of chromospheres and coronae in solar mass stars - A far-ultraviolet and soft X-ray comparison of Arcturus /K2 III/ and Alpha Centauri A /G2 V/

NASA Technical Reports Server (NTRS)

Ayres, T. R.; Simon, T.; Linsky, J. L.

1982-01-01

IUE far-UV and Einstein Observatory soft X-ray observations for the red giant Arcturus and the nearby yellow dwarf Alpha-Centauri A, which are archetypes of solar mass stars in different stages of evolution, are compared. Evidence is found for neither coronal soft X-ray emission from the red giant, at surface flux levels of only 0.0006 that detected previously for the yellow dwarf, nor C II and IV resonance line emission at surface flux levels of only 0.02 those of the yellow dwarf. The resonance line upper limits and previous detections of the C II intersystem UV multiplet 0.01 near 2325 A provide evidence for an Arcturus outer atmosphere that is geometrically extended, tenuous and cool. The red giant has, in addition, a prominent cool stellar wind. An extensive tabulation of line identifications, widths and fluxes for the IUE far-UV echelle spectra of the two stars is given, and two competing explanations for the Wilson-Bappu effect are discussed.

Laser discrimination by stimulated emission of a phosphor

NASA Technical Reports Server (NTRS)

Mathur, V. K.; Chakrabarti, K.

1991-01-01

A method for discriminating sources of UV, near infrared, and far infrared laser radiation was discovered. This technology is based on the use of a single magnesium sulfide phosphor doubly doped with rare earth ions, which is thermally/optically stimulated to generate colors correlatable to the incident laser radiation. The phosphor, after initial charging by visible light, exhibits green stimulated luminescence when exposed to a near infrared source (Nd: YAG laser). On exposure to far infrared sources (CO2 laser) the phosphor emission changes to orange color. A UV laser produces both an orange red as well as green color. A device using this phosphor is useful for detecting the laser and for discriminating between the near infrared, far infrared, and UV lasers. The technology is also capable of infrared laser diode beam profiling since the radiation source leaves an imprint on the phosphor that can be photographed. Continued development of the technology offers potential for discrimination between even smaller bandwidths within the infrared spectrum, a possible aid to communication or wavemixing devices that need to rapidly identify and process optical signals.

Ten More New Sightlines for the Study of Intergalactic Helium, and Hundreds of Far-Ultraviolet-Bright Quasars, from the Sloan Digital Sky Survey, Galaxy Evolution Explorer, and Hubble Space Telescope

NASA Astrophysics Data System (ADS)

Syphers, David; Anderson, Scott F.; Zheng, Wei; Haggard, Daryl; Meiksin, Avery; Schneider, Donald P.; York, Donald G.

2009-11-01

Absorption along quasar sightlines remains among the most sensitive direct measures of He II reionization in much of the intergalactic medium (IGM). Until recently, fewer than a half-dozen unobscured quasar sightlines suitable for the He II Gunn-Peterson test were known; although these handful demonstrated great promise, the small sample size limited confidence in cosmological inferences. We have recently added nine more such clean He II quasars, exploiting Sloan Digital Sky Survey (SDSS) quasar samples, broadband ultraviolet (UV) imaging from Galaxy Evolution Explorer (GALEX), and high-yield UV spectroscopic confirmations from Hubble Space Telescope (HST). Here we markedly expand this approach by cross-correlating SDSS DR7 and GALEX GR4+5 to catalog 428 SDSS and 165 other quasars with z > 2.78 having likely (~70%) GALEX detections, suggesting they are bright into the far-UV. Reconnaissance HST Cycle 16 Supplemental prism data for 29 of these new quasar-GALEX matches spectroscopically confirm 17 as indeed far-UV bright. At least 10 of these confirmations have clean sightlines all the way down to He II Lyα, substantially expanding the number of known clean He II quasars, and reaffirming the order of magnitude enhanced efficiency of our selection technique. Combined confirmations from this and our past programs yield more than 20 He II quasars, quintupling the sample. These provide substantial progress toward a sample of He II quasar sightlines large enough, and spanning a sufficient redshift range, to enable statistical IGM studies that may avoid individual object peculiarity and sightline variance. Our expanded catalog of hundreds of high-likelihood far-UV-bright QSOs additionally will be useful for understanding the extreme-UV properties of the quasars themselves. Based on observations with the NASA/ESA Hubble Space Telescope obtained at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS5-26555.

Germicidal Efficacy and Mammalian Skin Safety of 222-nm UV Light

PubMed Central

Buonanno, Manuela; Ponnaiya, Brian; Welch, David; Stanislauskas, Milda; Randers-Pehrson, Gerhard; Smilenov, Lubomir; Lowy, Franklin D.; Owens, David M.; Brenner, David J.

2017-01-01

We have previously shown that 207-nm ultraviolet (UV) light has similar antimicrobial properties as typical germicidal UV light (254 nm), but without inducing mammalian skin damage. The biophysical rationale is based on the limited penetration distance of 207-nm light in biological samples (e.g. stratum corneum) compared with that of 254-nm light. Here we extended our previous studies to 222-nm light and tested the hypothesis that there exists a narrow wavelength window in the far-UVC region, from around 200–222 nm, which is significantly harmful to bacteria, but without damaging cells in tissues. We used a krypton-chlorine (Kr-Cl) excimer lamp that produces 222-nm UV light with a bandpass filter to remove the lower- and higher-wavelength components. Relative to respective controls, we measured: 1. in vitro killing of methicillin-resistant Staphylococcus aureus (MRSA) as a function of UV fluence; 2. yields of the main UV-associated premutagenic DNA lesions (cyclobutane pyrimidine dimers and 6-4 photoproducts) in a 3D human skin tissue model in vitro; 3. eight cellular and molecular skin damage endpoints in exposed hairless mice in vivo. Comparisons were made with results from a conventional 254-nm UV germicidal lamp used as positive control. We found that 222-nm light kills MRSA efficiently but, unlike conventional germicidal UV lamps (254 nm), it produces almost no premutagenic UV-associated DNA lesions in a 3D human skin model and it is not cytotoxic to exposed mammalian skin. As predicted by biophysical considerations and in agreement with our previous findings, far-UVC light in the range of 200–222 nm kills bacteria efficiently regardless of their drug-resistant proficiency, but without the skin damaging effects associated with conventional germicidal UV exposure. PMID:28225654

Germicidal Efficacy and Mammalian Skin Safety of 222-nm UV Light.

PubMed

Buonanno, Manuela; Ponnaiya, Brian; Welch, David; Stanislauskas, Milda; Randers-Pehrson, Gerhard; Smilenov, Lubomir; Lowy, Franklin D; Owens, David M; Brenner, David J

2017-04-01

We have previously shown that 207-nm ultraviolet (UV) light has similar antimicrobial properties as typical germicidal UV light (254 nm), but without inducing mammalian skin damage. The biophysical rationale is based on the limited penetration distance of 207-nm light in biological samples (e.g. stratum corneum) compared with that of 254-nm light. Here we extended our previous studies to 222-nm light and tested the hypothesis that there exists a narrow wavelength window in the far-UVC region, from around 200-222 nm, which is significantly harmful to bacteria, but without damaging cells in tissues. We used a krypton-chlorine (Kr-Cl) excimer lamp that produces 222-nm UV light with a bandpass filter to remove the lower- and higher-wavelength components. Relative to respective controls, we measured: 1. in vitro killing of methicillin-resistant Staphylococcus aureus (MRSA) as a function of UV fluence; 2. yields of the main UV-associated premutagenic DNA lesions (cyclobutane pyrimidine dimers and 6-4 photoproducts) in a 3D human skin tissue model in vitro; 3. eight cellular and molecular skin damage endpoints in exposed hairless mice in vivo. Comparisons were made with results from a conventional 254-nm UV germicidal lamp used as positive control. We found that 222-nm light kills MRSA efficiently but, unlike conventional germicidal UV lamps (254 nm), it produces almost no premutagenic UV-associated DNA lesions in a 3D human skin model and it is not cytotoxic to exposed mammalian skin. As predicted by biophysical considerations and in agreement with our previous findings, far-UVC light in the range of 200-222 nm kills bacteria efficiently regardless of their drug-resistant proficiency, but without the skin damaging effects associated with conventional germicidal UV exposure.

High-speed cell recognition algorithm for ultrafast flow cytometer imaging system.

PubMed

Zhao, Wanyue; Wang, Chao; Chen, Hongwei; Chen, Minghua; Yang, Sigang

2018-04-01

An optical time-stretch flow imaging system enables high-throughput examination of cells/particles with unprecedented high speed and resolution. A significant amount of raw image data is produced. A high-speed cell recognition algorithm is, therefore, highly demanded to analyze large amounts of data efficiently. A high-speed cell recognition algorithm consisting of two-stage cascaded detection and Gaussian mixture model (GMM) classification is proposed. The first stage of detection extracts cell regions. The second stage integrates distance transform and the watershed algorithm to separate clustered cells. Finally, the cells detected are classified by GMM. We compared the performance of our algorithm with support vector machine. Results show that our algorithm increases the running speed by over 150% without sacrificing the recognition accuracy. This algorithm provides a promising solution for high-throughput and automated cell imaging and classification in the ultrafast flow cytometer imaging platform. (2018) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE).

Deep sequencing in library selection projects: what insight does it bring?

PubMed

Glanville, J; D'Angelo, S; Khan, T A; Reddy, S T; Naranjo, L; Ferrara, F; Bradbury, A R M

2015-08-01

High throughput sequencing is poised to change all aspects of the way antibodies and other binders are discovered and engineered. Millions of available sequence reads provide an unprecedented sampling depth able to guide the design and construction of effective, high quality naïve libraries containing tens of billions of unique molecules. Furthermore, during selections, high throughput sequencing enables quantitative tracing of enriched clones and position-specific guidance to amino acid variation under positive selection during antibody engineering. Successful application of the technologies relies on specific PCR reagent design, correct sequencing platform selection, and effective use of computational tools and statistical measures to remove error, identify antibodies, estimate diversity, and extract signatures of selection from the clone down to individual structural positions. Here we review these considerations and discuss some of the remaining challenges to the widespread adoption of the technology. Copyright © 2015 Elsevier Ltd. All rights reserved.

High-speed cell recognition algorithm for ultrafast flow cytometer imaging system

NASA Astrophysics Data System (ADS)

Zhao, Wanyue; Wang, Chao; Chen, Hongwei; Chen, Minghua; Yang, Sigang

2018-04-01

An optical time-stretch flow imaging system enables high-throughput examination of cells/particles with unprecedented high speed and resolution. A significant amount of raw image data is produced. A high-speed cell recognition algorithm is, therefore, highly demanded to analyze large amounts of data efficiently. A high-speed cell recognition algorithm consisting of two-stage cascaded detection and Gaussian mixture model (GMM) classification is proposed. The first stage of detection extracts cell regions. The second stage integrates distance transform and the watershed algorithm to separate clustered cells. Finally, the cells detected are classified by GMM. We compared the performance of our algorithm with support vector machine. Results show that our algorithm increases the running speed by over 150% without sacrificing the recognition accuracy. This algorithm provides a promising solution for high-throughput and automated cell imaging and classification in the ultrafast flow cytometer imaging platform.

Deep sequencing in library selection projects: what insight does it bring?

PubMed Central

Glanville, J; D’Angelo, S; Khan, T.A.; Reddy, S. T.; Naranjo, L.; Ferrara, F.; Bradbury, A.R.M.

2015-01-01

High throughput sequencing is poised to change all aspects of the way antibodies and other binders are discovered and engineered. Millions of available sequence reads provide an unprecedented sampling depth able to guide the design and construction of effective, high quality naïve libraries containing tens of billions of unique molecules. Furthermore, during selections, high throughput sequencing enables quantitative tracing of enriched clones and position-specific guidance to amino acid variation under positive selection during antibody engineering. Successful application of the technologies relies on specific PCR reagent design, correct sequencing platform selection, and effective use of computational tools and statistical measures to remove error, identify antibodies, estimate diversity, and extract signatures of selection from the clone down to individual structural positions. Here we review these considerations and discuss some of the remaining challenges to the widespread adoption of the technology. PMID:26451649

Microplate-based platform for combined chromatin and DNA methylation immunoprecipitation assays

PubMed Central

2011-01-01

Background The processes that compose expression of a given gene are far more complex than previously thought presenting unprecedented conceptual and mechanistic challenges that require development of new tools. Chromatin structure, which is regulated by DNA methylation and histone modification, is at the center of gene regulation. Immunoprecipitations of chromatin (ChIP) and methylated DNA (MeDIP) represent a major achievement in this area that allow researchers to probe chromatin modifications as well as specific protein-DNA interactions in vivo and to estimate the density of proteins at specific sites genome-wide. Although a critical component of chromatin structure, DNA methylation has often been studied independently of other chromatin events and transcription. Results To allow simultaneous measurements of DNA methylation with other genomic processes, we developed and validated a simple and easy-to-use high throughput microplate-based platform for analysis of DNA methylation. Compared to the traditional beads-based MeDIP the microplate MeDIP was more sensitive and had lower non-specific binding. We integrated the MeDIP method with a microplate ChIP assay which allows measurements of both DNA methylation and histone marks at the same time, Matrix ChIP-MeDIP platform. We illustrated several applications of this platform to relate DNA methylation, with chromatin and transcription events at selected genes in cultured cells, human cancer and in a model of diabetic kidney disease. Conclusion The high throughput capacity of Matrix ChIP-MeDIP to profile tens and potentially hundreds of different genomic events at the same time as DNA methylation represents a powerful platform to explore complex genomic mechanism at selected genes in cultured cells and in whole tissues. In this regard, Matrix ChIP-MeDIP should be useful to complement genome-wide studies where the rich chromatin and transcription database resources provide fruitful foundation to pursue mechanistic, functional and diagnostic information at genes of interest in health and disease. PMID:22098709

Neutral atomic absorption lines and far-UV extinction: Possible implications for depletions and grain parameters

NASA Technical Reports Server (NTRS)

Welty, Daniel E.

1990-01-01

Researchers examine nine lines of sight within the Galaxy and one in the Large Magellanic Cloud (LMC) for which data on both neutral atomic absorption lines (Snow 1984; White 1986; Welty, Hobbs, and York 1989) and far UV extinction (Bless and Savage 1972; Jenkins, Savage, and Spitzer 1986) are available, in order to test the assumption that variations in gamma/alpha will cancel in taking ratios of the ionization balance equation, and to try to determine to what extent that assumption has affected the aforementioned studies of depletions and grain properties.

The development of 8 inch roll-to-plate nanoimprint lithography (8-R2P-NIL) system

NASA Astrophysics Data System (ADS)

Lee, Lai Seng; Mohamed, Khairudin; Ooi, Su Guan

2017-07-01

Growth in semiconductor and integrated circuit industry was observed in the past decennium of years for industrial technology which followed Moore's law. The line width of nanostructure to be exposed was influenced by the essential technology of photolithography. Thus, it is crucial to have a low cost and high throughput manufacturing process for nanostructures. Nanoimprint Lithography technique invented by Stephen Y. Chou was considered as major nanolithography process to be used in future integrated circuit and integrated optics. The drawbacks of high imprint pressure, high imprint temperature, air bubbles formation, resist sticking to mold and low throughput of thermal nanoimprint lithography on silicon wafer have yet to be solved. Thus, the objectives of this work is to develop a high throughput, low imprint force, room temperature UV assisted 8 inch roll to plate nanoimprint lithography system capable of imprinting nanostructures on 200 mm silicon wafer using roller imprint with flexible mold. A piece of resist spin coated silicon wafer was placed onto vacuum chuck drives forward by a stepper motor. A quartz roller wrapped with a piece of transparent flexible mold was used as imprint roller. The imprinted nanostructures were cured by 10 W, 365 nm UV LED which situated inside the quartz roller. Heat generated by UV LED was dissipated by micro heat pipe. The flexible mold detaches from imprinted nanostructures in a 'line peeling' pattern and imprint pressure was measured by ultra-thin force sensors. This system has imprinting speed capability ranging from 0.19 mm/s to 5.65 mm/s, equivalent to imprinting capability of 3 to 20 pieces of 8 inch wafers per hour. Speed synchronization between imprint roller and vacuum chuck was achieved by controlling pulse rate supplied to stepper motor which drive the vacuum chuck. The speed different ranging from 2 nm/s to 98 nm/s is achievable. Vacuum chuck height was controlled by stepper motor with displacement of 5 nm/step.

Juno-UVS and Chandra Observations of Jupiter's Polar Auroral Emissions

NASA Astrophysics Data System (ADS)

Gladstone, G. R.; Kammer, J. A.; Versteeg, M. H.; Greathouse, T. K.; Hue, V.; Gérard, J.-C.; Grodent, D.; Bonfond, B.; Jackman, C.; Branduardi-Raymont, G.; Kraft, R. P.; Dunn, W. R.; Bolton, S. J.; Connerney, J. E. P.; Levin, S. M.; Mauk, B. H.; Valek, P.; Adriani, A.; Kurth, W. S.; Orton, G. S.

2017-09-01

New results are presented comparing Jupiter's auroras at far-ultraviolet and x-ray wavelengths, using data acquired by Juno-UVS and Chandra. The highly variable polar auroras (which are located within the main auroral oval) track each other quite well in brightness at these two wavelengths.

207-nm UV Light-A Promising Tool for Safe Low-Cost Reduction of Surgical Site Infections. II: In-Vivo Safety Studies.

PubMed

Buonanno, Manuela; Stanislauskas, Milda; Ponnaiya, Brian; Bigelow, Alan W; Randers-Pehrson, Gerhard; Xu, Yanping; Shuryak, Igor; Smilenov, Lubomir; Owens, David M; Brenner, David J

2016-01-01

UVC light generated by conventional germicidal lamps is a well-established anti-microbial modality, effective against both bacteria and viruses. However, it is a human health hazard, being both carcinogenic and cataractogenic. Earlier studies showed that single-wavelength far-UVC light (207 nm) generated by excimer lamps kills bacteria without apparent harm to human skin tissue in vitro. The biophysical explanation is that, due to its extremely short range in biological material, 207 nm UV light cannot penetrate the human stratum corneum (the outer dead-cell skin layer, thickness 5-20 μm) nor even the cytoplasm of individual human cells. By contrast, 207 nm UV light can penetrate bacteria and viruses because these cells are physically much smaller. To test the biophysically-based hypothesis that 207 nm UV light is not cytotoxic to exposed mammalian skin in vivo. Hairless mice were exposed to a bactericidal UV fluence of 157 mJ/cm2 delivered by a filtered Kr-Br excimer lamp producing monoenergetic 207-nm UV light, or delivered by a conventional 254-nm UV germicidal lamp. Sham irradiations constituted the negative control. Eight relevant cellular and molecular damage endpoints including epidermal hyperplasia, pre-mutagenic UV-associated DNA lesions, skin inflammation, and normal cell proliferation and differentiation were evaluated in mice dorsal skin harvested 48 h after UV exposure. While conventional germicidal UV (254 nm) exposure produced significant effects for all the studied skin damage endpoints, the same fluence of 207 nm UV light produced results that were not statistically distinguishable from the zero exposure controls. As predicted by biophysical considerations and in agreement with earlier in vitro studies, 207-nm light does not appear to be significantly cytotoxic to mouse skin. These results suggest that excimer-based far-UVC light could potentially be used for its anti-microbial properties, but without the associated hazards to skin of conventional germicidal UV lamps.

207-nm UV Light—A Promising Tool for Safe Low-Cost Reduction of Surgical Site Infections. II: In-Vivo Safety Studies

PubMed Central

Buonanno, Manuela; Stanislauskas, Milda; Ponnaiya, Brian; Bigelow, Alan W.; Randers-Pehrson, Gerhard; Xu, Yanping; Shuryak, Igor; Smilenov, Lubomir; Owens, David M.; Brenner, David J.

2016-01-01

Background UVC light generated by conventional germicidal lamps is a well-established anti-microbial modality, effective against both bacteria and viruses. However, it is a human health hazard, being both carcinogenic and cataractogenic. Earlier studies showed that single-wavelength far-UVC light (207 nm) generated by excimer lamps kills bacteria without apparent harm to human skin tissue in vitro. The biophysical explanation is that, due to its extremely short range in biological material, 207 nm UV light cannot penetrate the human stratum corneum (the outer dead-cell skin layer, thickness 5–20 μm) nor even the cytoplasm of individual human cells. By contrast, 207 nm UV light can penetrate bacteria and viruses because these cells are physically much smaller. Aims To test the biophysically-based hypothesis that 207 nm UV light is not cytotoxic to exposed mammalian skin in vivo. Methods Hairless mice were exposed to a bactericidal UV fluence of 157 mJ/cm2 delivered by a filtered Kr-Br excimer lamp producing monoenergetic 207-nm UV light, or delivered by a conventional 254-nm UV germicidal lamp. Sham irradiations constituted the negative control. Eight relevant cellular and molecular damage endpoints including epidermal hyperplasia, pre-mutagenic UV-associated DNA lesions, skin inflammation, and normal cell proliferation and differentiation were evaluated in mice dorsal skin harvested 48 h after UV exposure. Results While conventional germicidal UV (254 nm) exposure produced significant effects for all the studied skin damage endpoints, the same fluence of 207 nm UV light produced results that were not statistically distinguishable from the zero exposure controls. Conclusions As predicted by biophysical considerations and in agreement with earlier in vitro studies, 207-nm light does not appear to be significantly cytotoxic to mouse skin. These results suggest that excimer-based far-UVC light could potentially be used for its anti-microbial properties, but without the associated hazards to skin of conventional germicidal UV lamps. PMID:27275949

Performance comparison of SNP detection tools with illumina exome sequencing data—an assessment using both family pedigree information and sample-matched SNP array data

PubMed Central

Yi, Ming; Zhao, Yongmei; Jia, Li; He, Mei; Kebebew, Electron; Stephens, Robert M.

2014-01-01

To apply exome-seq-derived variants in the clinical setting, there is an urgent need to identify the best variant caller(s) from a large collection of available options. We have used an Illumina exome-seq dataset as a benchmark, with two validation scenarios—family pedigree information and SNP array data for the same samples, permitting global high-throughput cross-validation, to evaluate the quality of SNP calls derived from several popular variant discovery tools from both the open-source and commercial communities using a set of designated quality metrics. To the best of our knowledge, this is the first large-scale performance comparison of exome-seq variant discovery tools using high-throughput validation with both Mendelian inheritance checking and SNP array data, which allows us to gain insights into the accuracy of SNP calling through such high-throughput validation in an unprecedented way, whereas the previously reported comparison studies have only assessed concordance of these tools without directly assessing the quality of the derived SNPs. More importantly, the main purpose of our study was to establish a reusable procedure that applies high-throughput validation to compare the quality of SNP discovery tools with a focus on exome-seq, which can be used to compare any forthcoming tool(s) of interest. PMID:24831545

The Far-UV Albedo of the Moon Determined from Dayside LAMP Observations

NASA Astrophysics Data System (ADS)

Bullock, Mark A.; Retherford, K. D.; Gladstone, R.; Greathouse, T. K.; Mandt, K. E.; Hendrix, A. R.; Feldman, P. D.; Miles, P. F.; Egan, A. F.

2013-10-01

The Lyman Alpha Mapping Project (LAMP) onboard the Lunar Reconnaissance Orbiter (LRO) has been recording far-UV photons reflected from the lunar surface almost continuously since December 2009 (Gladstone et al., 2010). One photon at a time, LAMP builds up spectra from 575 to 1965 Å with a resolution of 26 Å. We will present 3 years of accumulated LAMP lunar dayside spectral maps and derive the lunar geometric albedo spectrum for a range of phase angles. These LAMP observations can thus be used to reconstruct the lunar far-UV photometric function and refine photometric models of the lunar surface (Hapke, 1963; Lucke et al., 1976). We will also compare LAMP lunar dayside albedo with the albedo from 820-1840 Å obtained by the Hopkins Ultraviolet Telescope (HUT) on the March 1995 Astro-2 Space Shuttle mission (Henry et al., 1995). The improved lunar photometric functions from our analysis of LAMP albedo spectra will enable a better quantitative assessment of how phase angle and composition affect the Moon’s reflectance in the far-UV. Gladstone, G. R., Stern, S. A., Retherford, K. D., Black, R. K., Slater, D. C., Davis, M. W., Versteeg, M. H., Persson, K. B., Parker, J. W., Kaufmann, D. E., Egan, A. F., Greathouse, T. K., Feldman, P. D., Hurley, D., Pryor, W. R., Hendrix, A. R., 2010. LAMP: The lyman alpha mapping project on NASA's lunar reconnaissance orbiter mission. Space Science Reviews. 150, 161-181. Hapke, B. W., 1963. A theoretical photometric function for the lunar surface. Journal of Geophysical Research. 68, 4571-4586. Henry, R. C., Feldman, P. D., Kruk, J. W., Davidsen, A. F., Durrance, S. T., 1995. Ultraviolet Albedo of the Moon with the Hopkins Ultraviolet Telescope. The Astrophysical Journal Letters. 454, L69. Lucke, R. L., Henry, R. C., Fastie, W. G., 1976. Far-ultraviolet albedo of the moon. The Astronomical Journal. 81, 1162-1169.

The Herschel-PACS Legacy of Low-mass Protostars: The Properties of Warm and Hot Gas Components and Their Origin in Far-UV Illuminated Shocks

NASA Astrophysics Data System (ADS)

Karska, Agata; Kaufman, Michael J.; Kristensen, Lars E.; van Dishoeck, Ewine F.; Herczeg, Gregory J.; Mottram, Joseph C.; Tychoniec, Łukasz; Lindberg, Johan E.; Evans, Neal J., II; Green, Joel D.; Yang, Yao-Lun; Gusdorf, Antoine; Itrich, Dominika; Siódmiak, Natasza

2018-04-01

Recent observations from Herschel allow the identification of important mechanisms responsible both for the heating of the gas that surrounds low-mass protostars and for its subsequent cooling in the far-infrared. Shocks are routinely invoked to reproduce some properties of the far-IR spectra, but standard models fail to reproduce the emission from key molecules, e.g., H2O. Here, we present the Herschel Photodetector Array Camera and Spectrometer (PACS) far-IR spectroscopy of 90 embedded low-mass protostars (Class 0/I). The Herschel-PACS spectral maps, covering ∼55–210 μm with a field of view of ∼50″, are used to quantify the gas excitation conditions and spatial extent using rotational transitions of H2O, high-J CO, and OH, as well as [O I] and [C II]. We confirm that a warm (∼300 K) CO reservoir is ubiquitous and that a hotter component (760 ± 170 K) is frequently detected around protostars. The line emission is extended beyond ∼1000 au spatial scales in 40/90 objects, typically in molecular tracers in Class 0 and atomic tracers in Class I objects. High-velocity emission (≳90 km s‑1) is detected in only 10 sources in the [O I] line, suggesting that the bulk of [O I] arises from gas that is moving slower than typical jets. Line flux ratios show an excellent agreement with models of C-shocks illuminated by ultraviolet (UV) photons for pre-shock densities of ∼105 cm‑3 and UV fields 0.1–10 times the interstellar value. The far-IR molecular and atomic lines are a unique diagnostic of feedback from UV emission and shocks in envelopes of deeply embedded protostars.

The diversity of ice algal communities on the Greenland Ice Sheet as revealed by oligotyping

PubMed Central

Lutz, Stefanie; McCutcheon, Jenine; McQuaid, James B.; Benning, Liane G.

2018-01-01

The Arctic is being disproportionally affected by climate change compared with other geographic locations, and is currently experiencing unprecedented melt rates. The Greenland Ice Sheet (GrIS) can be regarded as the largest supraglacial ecosystem on Earth, and ice algae are the dominant primary producers on bare ice surfaces throughout the course of a melt season. Ice-algal-derived pigments cause a darkening of the ice surface, which in turn decreases albedo and increases melt rates. The important role of ice algae in changing melt rates has only recently been recognized, and we currently know little about their community compositions and functions. Here, we present the first analysis of ice algal communities across a 100 km transect on the GrIS by high-throughput sequencing and subsequent oligotyping of the most abundant taxa. Our data reveal an extremely low algal diversity with Ancylonema nordenskiöldii and a Mesotaenium species being by far the dominant taxa at all sites. We employed an oligotyping approach and revealed a hidden diversity not detectable by conventional clustering of operational taxonomic units and taxonomic classification. Oligotypes of the dominant taxa exhibit a site-specific distribution, which may be linked to differences in temperatures and subsequently the extent of the melting. Our results help to better understand the distribution patterns of ice algal communities that play a crucial role in the GrIS ecosystem. PMID:29547098

Combining high-throughput phenotyping and genome-wide association studies to reveal natural genetic variation in rice

PubMed Central

Yang, Wanneng; Guo, Zilong; Huang, Chenglong; Duan, Lingfeng; Chen, Guoxing; Jiang, Ni; Fang, Wei; Feng, Hui; Xie, Weibo; Lian, Xingming; Wang, Gongwei; Luo, Qingming; Zhang, Qifa; Liu, Qian; Xiong, Lizhong

2014-01-01

Even as the study of plant genomics rapidly develops through the use of high-throughput sequencing techniques, traditional plant phenotyping lags far behind. Here we develop a high-throughput rice phenotyping facility (HRPF) to monitor 13 traditional agronomic traits and 2 newly defined traits during the rice growth period. Using genome-wide association studies (GWAS) of the 15 traits, we identify 141 associated loci, 25 of which contain known genes such as the Green Revolution semi-dwarf gene, SD1. Based on a performance evaluation of the HRPF and GWAS results, we demonstrate that high-throughput phenotyping has the potential to replace traditional phenotyping techniques and can provide valuable gene identification information. The combination of the multifunctional phenotyping tools HRPF and GWAS provides deep insights into the genetic architecture of important traits. PMID:25295980

Space View of the 1991 Gulf War Kuwaiti Oil Fires

NASA Astrophysics Data System (ADS)

Torres, O.; Bhartia, P. K.; Larko, D.

2014-12-01

During the 1991 Persian Gulf War, over 700 oil wells in Kuwait were set ablaze by the withdrawing Iraqi army with the apparent intent of hindering satellite reconnaissance and intelligence gathering activities by the coalition of forces repelling Iraq from occupied Kuwait. The oil fires that burned for an estimated 10 months, created a huge smoke plume whose spatial extent went at times beyond the Persian Gulf region, mobilized across the Saharan Desert reaching as far west as the North Atlantic Ocean. The Nimbus-7 TOMS Total Ozone Mapping Spectrometer, in operation from October 1978 to May 1993, measured the near UV radiances that in the mid-1990's became the input in the calculation of the well know Absorbing Aerosol Index that represented a major breakthrough in satellite-based aerosol remote sensing. Thus, unknowingly to the world, the N7-TOMS sensor was collecting in 1991 an unprecedented daily record of what can be considered the worst environmental catastrophe affecting the atmosphere since the beginning of the era of space-based remote sensing in the 1970's. An overview of the temporal and spatial extent of the synoptic scale 1991 Gulf War smoke plume as seen by the Nimbus-7 TOMS Absorbing Aerosol Index will be presented.

When cloud computing meets bioinformatics: a review.

PubMed

Zhou, Shuigeng; Liao, Ruiqi; Guan, Jihong

2013-10-01

In the past decades, with the rapid development of high-throughput technologies, biology research has generated an unprecedented amount of data. In order to store and process such a great amount of data, cloud computing and MapReduce were applied to many fields of bioinformatics. In this paper, we first introduce the basic concepts of cloud computing and MapReduce, and their applications in bioinformatics. We then highlight some problems challenging the applications of cloud computing and MapReduce to bioinformatics. Finally, we give a brief guideline for using cloud computing in biology research.

Evolutionary biology through the lens of budding yeast comparative genomics.

PubMed

Marsit, Souhir; Leducq, Jean-Baptiste; Durand, Éléonore; Marchant, Axelle; Filteau, Marie; Landry, Christian R

2017-10-01

The budding yeast Saccharomyces cerevisiae is a highly advanced model system for studying genetics, cell biology and systems biology. Over the past decade, the application of high-throughput sequencing technologies to this species has contributed to this yeast also becoming an important model for evolutionary genomics. Indeed, comparative genomic analyses of laboratory, wild and domesticated yeast populations are providing unprecedented detail about many of the processes that govern evolution, including long-term processes, such as reproductive isolation and speciation, and short-term processes, such as adaptation to natural and domestication-related environments.

UV-visible spectroscopy as an alternative to liquid chromatography for determination of everolimus in surfactant-containing dissolution media: a useful approach based on solid-phase extraction.

PubMed

Kamberi, Marika; Tran, Thu-Ngoc

2012-11-01

High-throughput 96-well solid phase extraction (SPE) plate with C-18 reversed phase sorbent followed by UV-visible (UV-Vis) microplate reader was applied to the analysis of hydrophobic drugs in surfactant-containing dissolution media, which are often used to evaluate the in-vitro drug release of drug eluting stents (DES). Everolimus and dissolution medium containing Triton X-405 were selected as representatives, and the appropriate SPE conditions (adsorption, washing and elution) were investigated to obtain a practical and reliable sample clean-up. It was shown that the developed SPE procedure was capable of removing interfering components (Triton X-405 and its impurities), allowing for an accurate automated spectrophotometric analysis to be performed. The proposed UV-Vis spectrophotometric method yielded equivalent results compared to a classical LC analysis method. Linear regression analysis indicated that both methods have the ability to obtain test results that are directly proportional to the concentration of analyte in the sample within the selected range of 1.0-10 μg/ml for everolimus, with a coefficient of correlation (r(2)) value of >0.998 and standard deviation of the residuals (Syx) of <2%. The individual recoveries of everolimus ranged from 97 to 104% for the UV-Vis spectrophotometric method and from 98 to 102 for the HPLC method, respectively. The 95% CI of the mean recovery for the UV-Vis spectrophotometric method was 99-102% and for the HPLC method was 99-101%. No statistical difference was found between the mean recoveries of the methods (p=0.42). Hence the methods are free from interference due to Triton and other chemicals present in the dissolution medium. The variation in the amount of everolimus estimated by UV-Vis spectrophotometric and HPLC methods was ≤3.5%, and the drug release profiles obtained by both methods were found to be equivalent by evaluation with two-one-sided t-test (two-tailed, p=0.62; mean of differences, 0.17; 95% CI, 0.62-0.96) and similarity factor f2 (f2 value, 87). The excellent conformity of the results makes UV-Vis spectrophotometer an ideal tool for analyzing the drugs in the media containing surfactants, after SPE. The 96-well SPE plates in combination with UV-Vis microplate reader provide a high throughput method for the determination of in-vitro drug release profile of DES. Switching from HPLC to UV-Vis spectrophotometer microplate reader assay reduces the solvent consumption and labor required for the sample analyses. This directly impacts the profitability of the laboratory. Copyright © 2012 Elsevier B.V. All rights reserved.

A charged aerosol detector/chemiluminescent nitrogen detector/liquid chromatography/mass spectrometry system for regular and fragment compound analysis in drug discovery.

PubMed

Jiang, Yutao; Hascall, Daniel; Li, Delia; Pease, Joseph H

2015-09-11

In this paper, we introduce a high throughput LCMS/UV/CAD/CLND system that improves upon previously reported systems by increasing both the quantitation accuracy and the range of compounds amenable to testing, in particular, low molecular weight "fragment" compounds. This system consists of a charged aerosol detector (CAD) and chemiluminescent nitrogen detector (CLND) added to a LCMS/UV system. Our results show that the addition of CAD and CLND to LCMS/UV is more reliable for concentration determination for a wider range of compounds than either detector alone. Our setup also allows for the parallel analysis of each sample by all four detectors and so does not significantly increase run time per sample. Copyright © 2015 Elsevier B.V. All rights reserved.

Optical Evaluation of DMDs with UV-Grade FS, Sapphire, MgF2 Windows and Reflectance of Bare Devices

NASA Technical Reports Server (NTRS)

Quijada, Manuel A.; Heap, Sara; Travinsky, Anton; Vorobiev, Dmitry; Ninkov, Zoran; Raisanen, Alan; Roberto, Massimo

2016-01-01

Digital Micro-mirror Devices (DMDs) have been identified as an alternative to microshutter arrays for space-based multi-object spectrometers (MOS). Specifically, the MOS at the heart of a proposed Galactic Evolution Spectroscopic Explorer (GESE) that uses the DMD as a reprogrammable slit mask. Unfortunately, the protective borosilicate windows limit the use of DMDs in the UV and IR regimes, where the glass has insufficient throughput. In this work, we present our efforts to replace standard DMD windows with custom windows made from UV-grade fused silica, Low Absorption Optical Sapphire (LAOS) and magnesium fluoride. We present reflectance measurements of the antireflection coated windows and a reflectance study of the DMDs active area (window removed). Furthermore, we investigated the long-term stability of the DMD reflectance and recoating device with fresh Al coatings.

Multiwavelength Variations of 3C 454.3 during the 2010 November to 2011 January Outburst

NASA Astrophysics Data System (ADS)

Wehrle, Ann E.; Marscher, Alan P.; Jorstad, Svetlana G.; Gurwell, Mark A.; Joshi, Manasvita; MacDonald, Nicholas R.; Williamson, Karen E.; Agudo, Iván; Grupe, Dirk

2012-10-01

We present multiwavelength data of the blazar 3C 454.3 obtained during an extremely bright outburst from 2010 November through 2011 January. These include flux density measurements with the Herschel Space Observatory at five submillimeter-wave and far-infrared bands, the Fermi Large Area Telescope at γ-ray energies, Swift at X-ray, ultraviolet (UV), and optical frequencies, and the Submillimeter Array at 1.3 mm. From this data set, we form a series of 52 spectral energy distributions (SEDs) spanning nearly two months that are unprecedented in time coverage and breadth of frequency. Discrete correlation analysis of the millimeter, far-infrared, and γ-ray light curves show that the variations were essentially simultaneous, indicative of cospatiality of the emission, at these wavebands. In contrast, differences in short-term fluctuations at various wavelengths imply the presence of inhomogeneities in physical conditions across the source. We locate the site of the outburst in the parsec-scale "core," whose flux density as measured on 7 mm Very Long Baseline Array images increased by 70% during the first five weeks of the outburst. Based on these considerations and guided by the SEDs, we propose a model in which turbulent plasma crosses a conical standing shock in the parsec-scale region of the jet. Here, the high-energy emission in the model is produced by inverse Compton scattering of seed photons supplied by either nonthermal radiation from a Mach disk, thermal emission from hot dust, or (for X-rays) synchrotron radiation from plasma that crosses the standing shock. For the two dates on which we fitted the model SED to the data, the model corresponds very well to the observations at all bands except at X-ray energies, where the spectrum is flatter than observed.

Spectral synthesis in the ultraviolet. II - Stellar populations and star formation in blue compact galaxies

NASA Technical Reports Server (NTRS)

Fanelli, Michael N.; O'Connell, Robert W.; Thuan, Trinh X.

1988-01-01

An initial attempt to apply optimizing spectral synthesis techniques to the far-UV spectra of blue compact galaxies (BCGs) is presented. The far-UV absorption-line spectra of the galaxies are clearly composite, with the signatures of the main-sequence types between O3 and mid-A. Most of the low-ionization absorption lines have a stellar origin. The Si IV and C IV features in several objects have P Cygni profiles. In Haro I the strength of Si IV indicates a significant blue supergiant population. The metal-poor blue compact dwarf Mrk 209 displays weak absorption lines, evidence that the stellar component has the same low metallicity as observed in the ionized gas. Good fits to the data are obtained the technique of optimizing population synthesis. The solutions yield stellar luminosity functions which display large discontinuities, indicative of discrete star formation episodes or bursts. The amount of UV extinction is low.

Far Ultraviolet Spectroscopy of Seven Nova-Like Variables

NASA Astrophysics Data System (ADS)

Mizusawa, Trisha; Merritt, Jason; Ballouz, Ronald-Louis; Bonaro, Michael; Foran, Sean; Plumberg, Christopher; Stewart, Heather; Wiley, Trayer; Sion, Edward M.

2010-03-01

We present the results of a multicomponent synthetic spectral analysis of the archival far ultraviolet spectra of several key nova-like variables including members of the SW Sex, RW Tri, UX UMa, and VY Scl subclasses: KR Aur, RW Tri, V825 Her, V795 Her, BP Lyn, V425 Cas, and HL Aqr. Accretion rates as well as the possible flux contribution of the accreting white dwarf are included in our analysis. Except for RW Tri, which has a reliable trigonometric parallax, we computed the distances to the nova-like systems using the method of Knigge. Our analysis of seven archival IUE spectra of RW Tri at its parallax distance of 341 pc consistently indicates a low mass (˜0.4 M⊙) white dwarf and an average accretion rate, . For KR Aur, we estimate that the white dwarf has Teff = 29,000 ± 2000 K, log g = 8.4, and contributes 18% of the far-UV flux, while an accretion disk with accretion rate at an inclination of 41° contributes the remainder. We find that an accretion disk dominates the far-UV spectrum of V425 Cas but a white dwarf contributes nonnegligibly with approximately 18% of the far-UV flux. For the two high state nova-likes, HL Aqr and V825 Her, their accretion disks totally dominate with and 3 × 10-9 M⊙ yr-1, respectively. For BP Lyn we find while for V795 Her, we find an accretion rate of . We discuss the implications of our results for the evolutionary status of nova-like variables.

The 1997 Reference of Diffuse Night Sky Brightness

NASA Technical Reports Server (NTRS)

Leinert, C.; Bowyer, S.; Haikala, L. K.; Hanner, M. S.; Hauser, M. G.; Levasseur-Regourd, A. C.; Mann, I.; Mattila, K.; Reach, W. T.; Schlosser, W.;

Spectral quality affects disease development of three pathogens on hydroponically grown plants.

PubMed

Schuerger, A C; Brown, C S

1997-02-01

Plants were grown under light-emitting diode (LED) arrays with various spectra to determine the effects of light quality on the development of diseases caused by tomato mosaic virus (ToMV) on pepper (Capsicum annuum L.), powdery mildew [Sphaerotheca fuliginea (Schlectend:Fr.) Pollaci] on cucumber (Cucumis sativus L.), and bacterial wilt (Pseudomonas solanacearum Smith) on tomato (Lycopersicon esculentum Mill.). One LED (660) array supplied 99% red light at 660 nm (25 nm bandwidth at half-peak height) and 1% far-red light between 700 to 800 nm. A second LED (660/735) array supplied 83% red light at 660 nm and 17% far-red light at 735 nm (25 nm bandwidth at half-peak height). A third LED (660/BF) array supplied 98% red light at 660 nm, 1% blue light (BF) between 350 to 550 nm, and 1% far-red light between 700 to 800 nm. Control plants were grown under broad-spectrum metal halide (MH) lamps. Plants were grown at a mean photon flux (300 to 800 nm) of 330 micromoles m-2 s-1 under a 12-h day/night photoperiod. Spectral quality affected each pathosystem differently. In the ToMV/pepper pathosystem, disease symptoms developed slower and were less severe in plants grown under light sources that contained blue and UV-A wavelengths (MH and 660/BF treatments) compared to plants grown under light sources that lacked blue and UV-A wavelengths (660 and 660/735 LED arrays). In contrast, the number of colonies per leaf was highest and the mean colony diameters of S. fuliginea on cucumber plants were largest on leaves grown under the MH lamp (highest amount of blue and UV-A light) and least on leaves grown under the 660 LED array (no blue or UV-A light). The addition of far-red irradiation to the primary light source in the 660/735 LED array increased the colony counts per leaf in the S. fuliginea/cucumber pathosystem compared to the red-only (660) LED array. In the P. solanacearum/tomato pathosystem, disease symptoms were less severe in plants grown under the 660 LED array, but the effects of spectral quality on disease development when other wavelengths were included in the light source (MH-, 660/BF-, and 660/735-grown plants) were equivocal. These results demonstrate that spectral quality may be useful as a component of an integrated pest management program for future space-based controlled ecological life support systems.

Spectral quality affects disease development of three pathogens on hydroponically grown plants

NASA Technical Reports Server (NTRS)

Schuerger, A. C.; Brown, C. S.; Sager, J. C. (Principal Investigator)

1997-01-01

Plants were grown under light-emitting diode (LED) arrays with various spectra to determine the effects of light quality on the development of diseases caused by tomato mosaic virus (ToMV) on pepper (Capsicum annuum L.), powdery mildew [Sphaerotheca fuliginea (Schlectend:Fr.) Pollaci] on cucumber (Cucumis sativus L.), and bacterial wilt (Pseudomonas solanacearum Smith) on tomato (Lycopersicon esculentum Mill.). One LED (660) array supplied 99% red light at 660 nm (25 nm bandwidth at half-peak height) and 1% far-red light between 700 to 800 nm. A second LED (660/735) array supplied 83% red light at 660 nm and 17% far-red light at 735 nm (25 nm bandwidth at half-peak height). A third LED (660/BF) array supplied 98% red light at 660 nm, 1% blue light (BF) between 350 to 550 nm, and 1% far-red light between 700 to 800 nm. Control plants were grown under broad-spectrum metal halide (MH) lamps. Plants were grown at a mean photon flux (300 to 800 nm) of 330 micromoles m-2 s-1 under a 12-h day/night photoperiod. Spectral quality affected each pathosystem differently. In the ToMV/pepper pathosystem, disease symptoms developed slower and were less severe in plants grown under light sources that contained blue and UV-A wavelengths (MH and 660/BF treatments) compared to plants grown under light sources that lacked blue and UV-A wavelengths (660 and 660/735 LED arrays). In contrast, the number of colonies per leaf was highest and the mean colony diameters of S. fuliginea on cucumber plants were largest on leaves grown under the MH lamp (highest amount of blue and UV-A light) and least on leaves grown under the 660 LED array (no blue or UV-A light). The addition of far-red irradiation to the primary light source in the 660/735 LED array increased the colony counts per leaf in the S. fuliginea/cucumber pathosystem compared to the red-only (660) LED array. In the P. solanacearum/tomato pathosystem, disease symptoms were less severe in plants grown under the 660 LED array, but the effects of spectral quality on disease development when other wavelengths were included in the light source (MH-, 660/BF-, and 660/735-grown plants) were equivocal. These results demonstrate that spectral quality may be useful as a component of an integrated pest management program for future space-based controlled ecological life support systems.

Rocket instrument for far-UV spectrophotometry of faint astronomical objects.

PubMed

Hartig, G F; Fastie, W G; Davidsen, A F

1980-03-01

A sensitive sounding rocket instrument for moderate (~10-A) resolution far-UV (lambda1160-lambda1750-A) spectrophotometry of faint astronomical objects has been developed. The instrument employs a photon-counting microchannel plate imaging detector and a concave grating spectrograph behind a 40-cm Dall-Kirkham telescope. A unique remote-control pointing system, incorporating an SIT vidicon aspect camera, two star trackers, and a tone-encoded command telemetry link, permits the telescope to be oriented to within 5 arc sec of any target for which suitable guide stars can be found. The design, construction, calibration, and flight performance of the instrument are discussed.

Granular activated carbon adsorption of organic micro-pollutants in drinking water and treated wastewater--Aligning breakthrough curves and capacities.

PubMed

Zietzschmann, Frederik; Stützer, Christian; Jekel, Martin

2016-04-01

Small-scale granular activated carbon (GAC) tests for the adsorption of organic micro-pollutants (OMP) were conducted with drinking water and wastewater treatment plant (WWTP) effluent. In both waters, three influent OMP concentration levels were tested. As long as the influent OMP concentrations are below certain thresholds, the relative breakthrough behavior is not impacted in the respective water. Accordingly, the GAC capacity for OMP is directly proportional to the influent OMP concentration in the corresponding water. The differences between the OMP breakthrough curves in drinking water and WWTP effluent can be attributed to the concentrations of the low molecular weight acid and neutral (LMW) organics of the waters. Presenting the relative OMP concentrations (c/c0) over the specific throughput of the LMW organics (mg LMW organics/g GAC), the OMP breakthrough curves in drinking water and WWTP effluent superimpose each other. This superimposition can be further increased if the UV absorbance at 254 nm (UV254) of the LMW organics is considered. In contrast, using the specific throughput of the dissolved organic carbon (DOC) did not suffice to obtain superimposed breakthrough curves. Thus, the LMW organics are the major water constituent impacting OMP adsorption onto GAC. The results demonstrate that knowing the influent OMP and LMW organics concentrations (and UV254) of different waters, the OMP breakthroughs and GAC capacities corresponding to any water can be applied to all other waters. Copyright © 2016 Elsevier Ltd. All rights reserved.

Two UV colours of the central part of M 31

NASA Technical Reports Server (NTRS)

Deharveng, J. M.; Laget, M.; Monnet, G.; Vuillemin, A.

1976-01-01

Two photographs of the galaxy M 31 have been obtained in the far UV with a Faust rocket experiment and in the near UV with the S 183 experiment aboard Skylab. Only the central part of the galaxy is detected. Reductions provide both the energy received and the angular area over M 31 from which it is emitted. The UV flux is brighter than expected from extrapolation of the visible spectrum. The distribution below 300 A is rather flat and different from previous OAO-2 observations. These results, combined with Lyman continuum flux evaluation, are used to discuss the temperature and the age of the stars which may be responsible for this anomalous UV distribution.

Methylglyoxal induced glycation and aggregation of human serum albumin: Biochemical and biophysical approach.

PubMed

Ahmed, Azaj; Shamsi, Anas; Khan, Mohd Shahnawaz; Husain, Fohad Mabood; Bano, Bilqees

2018-07-01

Serum protein glycation and formation of advanced glycation end products (AGEs) correlates with many diseases viz. diabetes signifying the importance of studying the glycation pattern of serum proteins. In our present study, methylglyoxal was investigated for its effect on the structure of human serum albumin (HSA); exploring the formation of AGEs and aggregates of HSA. The analytical tools employed includes intrinsic and extrinsic fluorescence, UV spectroscopy, far UV circular dichroism, Thioflavin T fluorescence, congo red binding, polyacrylamide gel electrophoresis (PAGE). UV and fluorescence spectroscopy revealed the structural transition of native HSA evident by new peaks and increased absorbance in UV spectra and quenched fluorescence in the presence of MG. Far UV CD spectroscopy revealed MG induced secondary structural alteration evident by reduced α-helical content. AGEs formation was confirmed by AGEs specific fluorescence. Increased ThT fluorescence and CR absorbance of 10mM MG incubated HSA suggests that glycated HSA results in the formation of aggregates of HSA. SEM and TEM were reported to have an insight of these aggregates. Molecular docking was also utilized to see site specific interaction of MG-HSA. This study is clinically significant as HSA is a clinically relevant protein which plays a crucial role in many diseases. Copyright © 2018 Elsevier B.V. All rights reserved.

The SLICE, CHESS, and SISTINE Ultraviolet Spectrographs: Rocket-Borne Instrumentation Supporting Future Astrophysics Missions

NASA Astrophysics Data System (ADS)

France, Kevin; Hoadley, Keri; Fleming, Brian T.; Kane, Robert; Nell, Nicholas; Beasley, Matthew; Green, James C.

2016-03-01

NASA’s suborbital program provides an opportunity to conduct unique science experiments above Earth’s atmosphere and is a pipeline for the technology and personnel essential to future space astrophysics, heliophysics, and atmospheric science missions. In this paper, we describe three astronomy payloads developed (or in development) by the Ultraviolet Rocket Group at the University of Colorado. These far-ultraviolet (UV) (100-160nm) spectrographic instruments are used to study a range of scientific topics, from gas in the interstellar medium (accessing diagnostics of material spanning five orders of magnitude in temperature in a single observation) to the energetic radiation environment of nearby exoplanetary systems. The three instruments, Suborbital Local Interstellar Cloud Experiment (SLICE), Colorado High-resolution Echelle Stellar Spectrograph (CHESS), and Suborbital Imaging Spectrograph for Transition region Irradiance from Nearby Exoplanet host stars (SISTINE) form a progression of instrument designs and component-level technology maturation. SLICE is a pathfinder instrument for the development of new data handling, storage, and telemetry techniques. CHESS and SISTINE are testbeds for technology and instrument design enabling high-resolution (R>105) point source spectroscopy and high throughput imaging spectroscopy, respectively, in support of future Explorer, Probe, and Flagship-class missions. The CHESS and SISTINE payloads support the development and flight testing of large-format photon-counting detectors and advanced optical coatings: NASA’s top two technology priorities for enabling a future flagship observatory (e.g. the LUVOIR Surveyor concept) that offers factors of ˜50-100 gain in UV spectroscopy capability over the Hubble Space Telescope. We present the design, component level laboratory characterization, and flight results for these instruments.

20180312 - US EPA-Unilever Collaborative Partnership: Accomplishments and Next Steps (SOT)

EPA Science Inventory

Reiterating the goals of the partnership, this summarizes the accomplishments and progress made so far in the collaboration, and announces a two phase extension focused on further development of high-throughput transcriptomic platform

Far-ultraviolet absorption spectra of quasars: How to find missing hot gas and metals

NASA Technical Reports Server (NTRS)

Verner, D. A.; Tytler, David; Barthel, P. D.

1994-01-01

We show that some high-redshift QSO absorption systems that reveal only the H I Lyman series lines at wavelengths visible from the ground maybe a new class of ultra-high-ionization metal line systems, with metal lines in the far-UV region which is now being explored with satellites. At high temperatures or in intense radiation fields metal systems will not show the usual C IV absorption, and O VI will become the most prominent metal absorber. At still higher ionization, O IV also becomes weak and the strongest metal lines are from Ne VIII, Mg X and Si XII, which have doublets in the rangs 500-800 A. Hence very high ionization metal systems will not show metal lines in existing spectra. Recent X-ray observations show that galaxy halos contain hot gas, so we predict that far-UV spectra of QSOs will also show this gas.

RNA-Binding Proteins Revisited - The Emerging Arabidopsis mRNA Interactome.

PubMed

Köster, Tino; Marondedze, Claudius; Meyer, Katja; Staiger, Dorothee

2017-06-01

RNA-protein interaction is an important checkpoint to tune gene expression at the RNA level. Global identification of proteins binding in vivo to mRNA has been possible through interactome capture - where proteins are fixed to target RNAs by UV crosslinking and purified through affinity capture of polyadenylated RNA. In Arabidopsis over 500 RNA-binding proteins (RBPs) enriched in UV-crosslinked samples have been identified. As in mammals and yeast, the mRNA interactomes came with a few surprises. For example, a plethora of the proteins caught on RNA had not previously been linked to RNA-mediated processes, for example proteins of intermediary metabolism. Thus, the studies provide unprecedented insights into the composition of the mRNA interactome, highlighting the complexity of RNA-mediated processes. Copyright © 2017 Elsevier Ltd. All rights reserved.

The Relevance of Learning Styles for International Pedagogy in Higher Education

ERIC Educational Resources Information Center

Eaves, Mina

2011-01-01

As the number of international students and transnational education agreements continue to rise at an unprecedented rate in many countries, an area of research that continues to lag behind is how far students' learning styles can adapt to different educational contexts. Learning styles research has recently developed from simplistic yet popular…

Scaling and automation of a high-throughput single-cell-derived tumor sphere assay chip.

PubMed

Cheng, Yu-Heng; Chen, Yu-Chih; Brien, Riley; Yoon, Euisik

2016-10-07

Recent research suggests that cancer stem-like cells (CSCs) are the key subpopulation for tumor relapse and metastasis. Due to cancer plasticity in surface antigen and enzymatic activity markers, functional tumorsphere assays are promising alternatives for CSC identification. To reliably quantify rare CSCs (1-5%), thousands of single-cell suspension cultures are required. While microfluidics is a powerful tool in handling single cells, previous works provide limited throughput and lack automatic data analysis capability required for high-throughput studies. In this study, we present the scaling and automation of high-throughput single-cell-derived tumor sphere assay chips, facilitating the tracking of up to ∼10 000 cells on a chip with ∼76.5% capture rate. The presented cell capture scheme guarantees sampling a representative population from the bulk cells. To analyze thousands of single-cells with a variety of fluorescent intensities, a highly adaptable analysis program was developed for cell/sphere counting and size measurement. Using a Pluronic® F108 (poly(ethylene glycol)-block-poly(propylene glycol)-block-poly(ethylene glycol)) coating on polydimethylsiloxane (PDMS), a suspension culture environment was created to test a controversial hypothesis: whether larger or smaller cells are more stem-like defined by the capability to form single-cell-derived spheres. Different cell lines showed different correlations between sphere formation rate and initial cell size, suggesting heterogeneity in pathway regulation among breast cancer cell lines. More interestingly, by monitoring hundreds of spheres, we identified heterogeneity in sphere growth dynamics, indicating the cellular heterogeneity even within CSCs. These preliminary results highlight the power of unprecedented high-throughput and automation in CSC studies.

Ultraviolet B-Sensitive Rice Cultivar Deficient in Cyclobutyl Pyrimidine Dimer Repair.

PubMed Central

Hidema, J.; Kumagai, T.; Sutherland, J. C.; Sutherland, B. M.

1997-01-01

Repair of cyclobutyl pyrimidine dimers (CPDs) in DNA is essential in most organisms to prevent biological damage by ultraviolet (UV) light. In higher plants tested thus far, UV-sensitive strains had higher initial damage levels or deficient repair of nondimer DNA lesions but normal CPD repair. This suggested that CPDs might not be important for biological lesions. The photosynthetic apparatus has also been proposed as a critical target. We have analyzed CPD induction and repair in the UV-sensitive rice (Oryza sativa L.) cultivar Norin 1 and its close relative UV-resistant Sasanishiki using alkaline agarose gel electrophoresis. Norin 1 is deficient in cyclobutyl pyrimidine dimer photoreactivation and excision; thus, UV sensitivity correlates with deficient dimer repair. PMID:12223592

Probing the infrared counterparts of diffuse far-ultraviolet sources in the Galaxy

NASA Astrophysics Data System (ADS)

Saikia, Gautam; Shalima, P.; Gogoi, Rupjyoti; Pathak, Amit

2017-12-01

Recent availability of high quality infrared (IR) data for diffuse regions in the Galaxy and external galaxies have added to our understanding of interstellar dust. A comparison of ultraviolet (UV) and IR observations may be used to estimate absorption, scattering and thermal emission from interstellar dust. In this paper, we report IR and UV observations for selective diffuse sources in the Galaxy. Using archival mid-infrared (MIR) and far-infrared (FIR) observations from Spitzer Space Telescope, we look for counterparts of diffuse far-ultraviolet (FUV) sources observed by the Voyager, Far Ultraviolet Spectroscopic Explorer (FUSE) and Galaxy Evolution Explorer (GALEX) telescopes in the Galaxy. IR emission features at 8 μm are generally attributed to Polycyclic Aromatic Hydrocarbon (PAH) molecules, while emission at 24 μm are attributed to Very Small Grains (VSGs). The data presented here is unique and our study tries to establish a relation between various dust populations. By studying the FUV-IR correlations separately at low and high latitude locations, we have identified the grain component responsible for the diffuse FUV emission.

Brain Connectivity as a DNA Sequencing Problem

NASA Astrophysics Data System (ADS)

Zador, Anthony

The mammalian cortex consists of millions or billions of neurons, each connected to thousands of other neurons. Traditional methods for determining the brain connectivity rely on microscopy to visualize neuronal connections, but such methods are slow, labor-intensive and often lack single neuron resolution. We have recently developed a new method, MAPseq, to recast the determination of brain wiring into a form that can exploit the tremendous recent advances in high-throughput DNA sequencing. DNA sequencing technology has outpaced even Moore's law, so that the cost of sequencing the human genome has dropped from a billion dollars in 2001 to below a thousand dollars today. MAPseq works by introducing random sequences of DNA-``barcodes''-to tag neurons uniquely. With MAPseq, we can determine the connectivity of over 50K single neurons in a single mouse cortex in about a week, an unprecedented throughput, ushering in the era of ``big data'' for brain wiring. We are now developing analytical tools and algorithms to make sense of these novel data sets.

Plastic straw: future of high-speed signaling

NASA Astrophysics Data System (ADS)

Song, Ha Il; Jin, Huxian; Bae, Hyeon-Min

2015-11-01

The ever-increasing demand for bandwidth triggered by mobile and video Internet traffic requires advanced interconnect solutions satisfying functional and economic constraints. A new interconnect called E-TUBE is proposed as a cost-and-power-effective all-electrical-domain wideband waveguide solution for high-speed high-volume short-reach communication links. The E-TUBE achieves an unprecedented level of performance in terms of bandwidth-per-carrier frequency, power, and density without requiring a precision manufacturing process unlike conventional optical/waveguide solutions. The E-TUBE exhibits a frequency-independent loss-profile of 4 dB/m and has nearly 20-GHz bandwidth over the V band. A single-sideband signal transmission enabled by the inherent frequency response of the E-TUBE renders two-times data throughput without any physical overhead compared to conventional radio frequency communication technologies. This new interconnect scheme would be attractive to parties interested in high throughput links, including but not limited to, 100/400 Gbps chip-to-chip communications.

All-Optical Electrophysiology for Disease Modeling and Pharmacological Characterization of Neurons.

PubMed

Werley, Christopher A; Brookings, Ted; Upadhyay, Hansini; Williams, Luis A; McManus, Owen B; Dempsey, Graham T

2017-09-11

A key challenge for establishing a phenotypic screen for neuronal excitability is measurement of membrane potential changes with high throughput and accuracy. Most approaches for probing excitability rely on low-throughput, invasive methods or lack cell-specific information. These limitations stimulated the development of novel strategies for characterizing the electrical properties of cultured neurons. Among these was the development of optogenetic technologies (Optopatch) that allow for stimulation and recording of membrane voltage signals from cultured neurons with single-cell sensitivity and millisecond temporal resolution. Neuronal activity is elicited using blue light activation of the channelrhodopsin variant 'CheRiff'. Action potentials and synaptic signals are measured with 'QuasAr', a rapid and sensitive voltage-indicating protein with near-infrared fluorescence that scales proportionately with transmembrane potential. This integrated technology of optical stimulation and recording of electrical signals enables investigation of neuronal electrical function with unprecedented scale and precision. © 2017 by John Wiley & Sons, Inc. Copyright © 2017 John Wiley & Sons, Inc.

FLIC: High-Throughput, Continuous Analysis of Feeding Behaviors in Drosophila

PubMed Central

Pletcher, Scott D.

2014-01-01

We present a complete hardware and software system for collecting and quantifying continuous measures of feeding behaviors in the fruit fly, Drosophila melanogaster. The FLIC (Fly Liquid-Food Interaction Counter) detects analog electronic signals as brief as 50 µs that occur when a fly makes physical contact with liquid food. Signal characteristics effectively distinguish between different types of behaviors, such as feeding and tasting events. The FLIC system performs as well or better than popular methods for simple assays, and it provides an unprecedented opportunity to study novel components of feeding behavior, such as time-dependent changes in food preference and individual levels of motivation and hunger. Furthermore, FLIC experiments can persist indefinitely without disturbance, and we highlight this ability by establishing a detailed picture of circadian feeding behaviors in the fly. We believe that the FLIC system will work hand-in-hand with modern molecular techniques to facilitate mechanistic studies of feeding behaviors in Drosophila using modern, high-throughput technologies. PMID:24978054

Functional mapping of yeast genomes by saturated transposition

PubMed Central

Michel, Agnès H; Hatakeyama, Riko; Kimmig, Philipp; Arter, Meret; Peter, Matthias; Matos, Joao; De Virgilio, Claudio; Kornmann, Benoît

2017-01-01

Yeast is a powerful model for systems genetics. We present a versatile, time- and labor-efficient method to functionally explore the Saccharomyces cerevisiae genome using saturated transposon mutagenesis coupled to high-throughput sequencing. SAturated Transposon Analysis in Yeast (SATAY) allows one-step mapping of all genetic loci in which transposons can insert without disrupting essential functions. SATAY is particularly suited to discover loci important for growth under various conditions. SATAY (1) reveals positive and negative genetic interactions in single and multiple mutant strains, (2) can identify drug targets, (3) detects not only essential genes, but also essential protein domains, (4) generates both null and other informative alleles. In a SATAY screen for rapamycin-resistant mutants, we identify Pib2 (PhosphoInositide-Binding 2) as a master regulator of TORC1. We describe two antagonistic TORC1-activating and -inhibiting activities located on opposite ends of Pib2. Thus, SATAY allows to easily explore the yeast genome at unprecedented resolution and throughput. DOI: http://dx.doi.org/10.7554/eLife.23570.001 PMID:28481201

Mapping the miRNA interactome by crosslinking ligation and sequencing of hybrids (CLASH)

PubMed Central

Helwak, Aleksandra; Tollervey, David

2014-01-01

RNA-RNA interactions play critical roles in many cellular processes but studying them is difficult and laborious. Here, we describe an experimental procedure, termed crosslinking ligation and sequencing of hybrids (CLASH), which allows high-throughput identification of sites of RNA-RNA interaction. During CLASH, a tagged bait protein is UV crosslinked in vivo to stabilise RNA interactions and purified under denaturing conditions. RNAs associated with the bait protein are partially truncated, and the ends of RNA-duplexes are ligated together. Following linker addition, cDNA library preparation and high-throughput sequencing, the ligated duplexes give rise to chimeric cDNAs, which unambiguously identify RNA-RNA interaction sites independent of bioinformatic predictions. This protocol is optimized for studying miRNA targets bound by Argonaute proteins, but should be easily adapted for other RNA-binding proteins and classes of RNA. The protocol requires around 5 days to complete, excluding the time required for high-throughput sequencing and bioinformatic analyses. PMID:24577361

Part 3. a novel stereocontrolled, in situ, solution- and solid-phase, Aza Michael approach for high-throughput generation of tetrahydroaminoquinoline-derived natural-product-like architectures.

PubMed

Prakesch, Michael; Srivastava, Stuti; Leek, Donald M; Arya, Prabhat

2006-01-01

With the goal of rapidly accessing tetrahydroquinoline-based natural-product-like polycyclic architectures, herein, we report an unprecedented, in situ, stereocontrolled Aza Michael approach in solution and on the solid phase. The mild reaction conditions required to reach the desired target are highly attractive for the use of this method in library generation. To our knowledge, this approach has not been used before, and it opens a novel route leading to a wide variety of tetrahydroquinoline-derived bridged tricyclic derivatives.

Precision medicine in the age of big data: The present and future role of large-scale unbiased sequencing in drug discovery and development.

PubMed

Vicini, P; Fields, O; Lai, E; Litwack, E D; Martin, A-M; Morgan, T M; Pacanowski, M A; Papaluca, M; Perez, O D; Ringel, M S; Robson, M; Sakul, H; Vockley, J; Zaks, T; Dolsten, M; Søgaard, M

2016-02-01

High throughput molecular and functional profiling of patients is a key driver of precision medicine. DNA and RNA characterization has been enabled at unprecedented cost and scale through rapid, disruptive progress in sequencing technology, but challenges persist in data management and interpretation. We analyze the state-of-the-art of large-scale unbiased sequencing in drug discovery and development, including technology, application, ethical, regulatory, policy and commercial considerations, and discuss issues of LUS implementation in clinical and regulatory practice. © 2015 American Society for Clinical Pharmacology and Therapeutics.

A confidence interval analysis of sampling effort, sequencing depth, and taxonomic resolution of fungal community ecology in the era of high-throughput sequencing.

PubMed

Oono, Ryoko

2017-01-01

High-throughput sequencing technology has helped microbial community ecologists explore ecological and evolutionary patterns at unprecedented scales. The benefits of a large sample size still typically outweigh that of greater sequencing depths per sample for accurate estimations of ecological inferences. However, excluding or not sequencing rare taxa may mislead the answers to the questions 'how and why are communities different?' This study evaluates the confidence intervals of ecological inferences from high-throughput sequencing data of foliar fungal endophytes as case studies through a range of sampling efforts, sequencing depths, and taxonomic resolutions to understand how technical and analytical practices may affect our interpretations. Increasing sampling size reliably decreased confidence intervals across multiple community comparisons. However, the effects of sequencing depths on confidence intervals depended on how rare taxa influenced the dissimilarity estimates among communities and did not significantly decrease confidence intervals for all community comparisons. A comparison of simulated communities under random drift suggests that sequencing depths are important in estimating dissimilarities between microbial communities under neutral selective processes. Confidence interval analyses reveal important biases as well as biological trends in microbial community studies that otherwise may be ignored when communities are only compared for statistically significant differences.

A confidence interval analysis of sampling effort, sequencing depth, and taxonomic resolution of fungal community ecology in the era of high-throughput sequencing

PubMed Central

2017-01-01

High-throughput sequencing technology has helped microbial community ecologists explore ecological and evolutionary patterns at unprecedented scales. The benefits of a large sample size still typically outweigh that of greater sequencing depths per sample for accurate estimations of ecological inferences. However, excluding or not sequencing rare taxa may mislead the answers to the questions ‘how and why are communities different?’ This study evaluates the confidence intervals of ecological inferences from high-throughput sequencing data of foliar fungal endophytes as case studies through a range of sampling efforts, sequencing depths, and taxonomic resolutions to understand how technical and analytical practices may affect our interpretations. Increasing sampling size reliably decreased confidence intervals across multiple community comparisons. However, the effects of sequencing depths on confidence intervals depended on how rare taxa influenced the dissimilarity estimates among communities and did not significantly decrease confidence intervals for all community comparisons. A comparison of simulated communities under random drift suggests that sequencing depths are important in estimating dissimilarities between microbial communities under neutral selective processes. Confidence interval analyses reveal important biases as well as biological trends in microbial community studies that otherwise may be ignored when communities are only compared for statistically significant differences. PMID:29253889

A high-throughput solid-phase extraction microchip combined with inductively coupled plasma-mass spectrometry for rapid determination of trace heavy metals in natural water.

PubMed

Shih, Tsung-Ting; Hsieh, Cheng-Chuan; Luo, Yu-Ting; Su, Yi-An; Chen, Ping-Hung; Chuang, Yu-Chen; Sun, Yuh-Chang

2016-04-15

Herein, a hyphenated system combining a high-throughput solid-phase extraction (htSPE) microchip with inductively coupled plasma-mass spectrometry (ICP-MS) for rapid determination of trace heavy metals was developed. Rather than performing multiple analyses in parallel for the enhancement of analytical throughput, we improved the processing speed for individual samples by increasing the operation flow rate during SPE procedures. To this end, an innovative device combining a micromixer and a multi-channeled extraction unit was designed. Furthermore, a programmable valve manifold was used to interface the developed microchip and ICP-MS instrumentation in order to fully automate the system, leading to a dramatic reduction in operation time and human error. Under the optimized operation conditions for the established system, detection limits of 1.64-42.54 ng L(-1) for the analyte ions were achieved. Validation procedures demonstrated that the developed method could be satisfactorily applied to the determination of trace heavy metals in natural water. Each analysis could be readily accomplished within just 186 s using the established system. This represents, to the best of our knowledge, an unprecedented speed for the analysis of trace heavy metal ions. Copyright © 2016 Elsevier B.V. All rights reserved.

Ultraviolet reflecting photonic microstructures in the King Penguin beak.

PubMed

Dresp, Birgitta; Jouventin, Pierre; Langley, Keith

2005-09-22

King and emperor penguins (Aptenodytes patagonicus and Aptenodytes forsteri) are the only species of marine birds so far known to reflect ultraviolet (UV) light from their beaks. Unlike humans, most birds perceive UV light and several species communicate using the near UV spectrum. Indeed, UV reflectance in addition to the colour of songbird feathers has been recognized as an important signal when choosing a mate. The king penguin is endowed with several highly coloured ornaments, notably its beak horn and breast and auricular plumage, but only its beak reflects UV, a property considered to influence its sexual attraction. Because no avian UV-reflecting pigments have yet been identified, the origin of such reflections is probably structural. In an attempt to identify the structures that give rise to UV reflectance, we combined reflectance spectrophotometry and morphological analysis by both light and electron microscopy, after experimental removal of surface layers of the beak horn. Here, we characterize for the first time a multilayer reflector photonic microstructure that produces the UV reflections in the king penguin beak.

THE BINARY BLACK HOLE MODEL FOR MRK 231 BITES THE DUST

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leighly, Karen M.; Terndrup, Donald M.; Gallagher, Sarah C.

2016-09-20

Mrk 231 is a nearby quasar with an unusually red near-UV-to-optical continuum, generally explained as heavy reddening by dust. Yan et al. proposed that Mrk 231 is a milliparsec black hole binary with little intrinsic reddening. We show that if the observed FUV continuum is intrinsic, as assumed by Yan et al., it fails by a factor of about 100 in powering the observed strength of the near-infrared emission lines and the thermal near and mid-infrared continuum. In contrast, the line and continuum strengths are typical for a reddened AGN spectral energy distribution (SED). We find that the He i*/Pmore » β ratio is sensitive to the SED for a one-zone model. If this sensitivity is maintained in general broadline region models, then this ratio may prove a useful diagnostic for heavily reddened quasars. Analysis of archival Hubble Space Telescope STIS and Faint Object Camera data revealed evidence that the far-UV continuum emission is resolved on size scales of ∼40 pc. The lack of broad absorption lines in the far-UV continuum might be explained if it were not coincident with the central engine. One possibility is that it is the central engine continuum reflected from the receding wind on the far side of the quasar.« less

Multi-Decadal Global Cooling and Unprecedented Ozone Loss Following a Regional Nuclear Conflict

NASA Astrophysics Data System (ADS)

Mills, M. J.; Toon, O. B.; Lee-Taylor, J. M.; Robock, A.

2014-12-01

We present the first study of the global impacts of a regional nuclear war with an Earth system model including atmospheric chemistry, ocean dynamics, and interactive sea-ice and land models (Mills et al., 2014). A limited, regional nuclear war between India and Pakistan in which each side detonates 50 15-kt weapons could produce about 5 Tg of black carbon. This would self-loft to the stratosphere, where it would spread globally, producing a sudden drop in surface temperatures and intense heating of the stratosphere. Using the Community Earth System Model with the Whole Atmosphere Community Climate Model (CESM1(WACCM)), we calculate an e-folding time of 8.7 years for stratospheric black carbon, compared to 4-6.5 years for previous studies (figure panel a). Our calculations show that global ozone losses of 20-50% over populated areas, levels unprecedented in human history, would accompany the coldest average surface temperatures in the last 1000 years (figure panel c). We calculate summer enhancements in UV indices of 30-80% over Mid-Latitudes, suggesting widespread damage to human health, agriculture, and terrestrial and aquatic ecosystems. Killing frosts would reduce growing seasons by 10-40 days per year for 5 years. Surface temperatures would be reduced for more than 25 years, due to thermal inertia and albedo effects in the ocean and expanded sea ice. The combined cooling and enhanced UV would put significant pressures on global food supplies and could trigger a global nuclear famine. Knowledge of the impacts of 100 small nuclear weapons should motivate the elimination of the more than 17,000 nuclear weapons that exist today. Mills, M. J., O. B. Toon, J. Lee-Taylor, and A. Robock (2014), Multidecadal global cooling and unprecedented ozone loss following a regional nuclear conflict, Earth's Future, 2(4), 161-176, doi:10.1002/2013EF000205.

Measurement of pyrimidine (6-4) photoproducts in DNA by a mild acidic hydrolysis-HPLC fluorescence detection assay.

PubMed

Douki, T; Voituriez, L; Cadet, J

1995-03-01

Pyrimidine (6-4) pyrimidone photoproducts constitute one of the major classes of DNA lesions induced by far-UV irradiation. However, their biological role remains difficult to assess partly because of the lack of a specific and sensitive assay for monitoring their formation in DNA. Here is presented a measurement method based on the release of the (6-4) base adducts from DNA followed by an HPLC separation associated with a sensitive and specific fluorescence detection. The quantitative and mechanistic aspects of the chemical hydrolysis, based on the use of hydrogen fluoride stabilized in pyridine, were investigated, using dinucleoside monophosphate (6-4) photoproducts as model compounds. The final hydrolysis products were isolated and characterized by UV, fluorescence, mass, and 1H NMR spectroscopies. Application of the assay to far-UV irradiated calf thymus DNA provided information on the sequence effect on the rate of formation of three of the four possible bipyrimidine (6-4) photoproducts.

Ultraviolet spectrophotometry of flares on ``quiescent'' M and K dwarf exoplanet hosts

NASA Astrophysics Data System (ADS)

Loyd, R. O. Parke; France, Kevin; Youngblood, Allison

We present an analysis of a sample of flares on ``quiescent'' (i.e. non-flare) M and K stars using temporally resolved UV spectroscopy from the growing body of MUSCLES Treasury Survey data. Specifically, our analysis quantified the response of the far-UV C II, Si III, Si IV, and N V emission lines and the far-UV continuum during the flares. Using these tracers, we examined one representative event on GJ 832. In concordance with flares recorded on the Sun and AD Leo, the MUSCLES flares are well fit by a power law relationship of similar slope in frequency versus energy. Flares can strip atmospheric mass from orbiting planets, adversely affecting their long-term habitability. To gauge the amplitude of this effect, we computed an energy-balance upper-limit on the amount of atmosphere a large flare might remove from an orbiting Earth due purely to elevated EUV flux and found this limit to be modest relative to Earth's atmospheric mass.

Far-UV properties of the nuclear region of M31

NASA Technical Reports Server (NTRS)

King, Ivan R.; Stanford, S. Adam; Crane, Philippe

1995-01-01

Comparison of the Hubble Space Telescope (HST) far-UV and visible images of the nucleus of M31 deepens the mystery of the two brightness peaks recently discovered by Lauer et al. At 175 mm the brightest point is the optically fainter peak (P2) that is close to the dynamical center. The very center of P2 has a UV upturn that is much greater than that of the bulge light, while the UV upturn of the optically brighter but off-center P1 is very similar to that of its surroundings. The excess FUV radiation form P2 is closely confined to its center and has a total flux density of 3 micro-joules, a level that is less likely to come from stellar radiation than from a high-frequency extension of the radio source at the center of M31. A surrounding region of 1.8 pc radius has a somewhat smaller Uv upturn than the rest of the bulge, but there is some lingering possibility that this depression might be an artifact of our correction of the spherical aberration. Our improvement decomposition of the V image removes the need to postulate a dust lane near the center. We confirm that P1 is very compact, and we derive a luminosity for it similar to that found by Lauer et al. The implications of all of this are briefly discussed.

A simple and sensitive high-throughput GFP screening in woody and herbaceous plants.

PubMed

Hily, Jean-Michel; Liu, Zongrang

2009-03-01

Green fluorescent protein (GFP) has been used widely as a powerful bioluminescent reporter, but its visualization by existing methods in tissues or whole plants and its utilization for high-throughput screening remains challenging in many species. Here, we report a fluorescence image analyzer-based method for GFP detection and its utility for high-throughput screening of transformed plants. Of three detection methods tested, the Typhoon fluorescence scanner was able to detect GFP fluorescence in all Arabidopsis thaliana tissues and apple leaves, while regular fluorescence microscopy detected it only in Arabidopsis flowers and siliques but barely in the leaves of either Arabidopsis or apple. The hand-held UV illumination method failed in all tissues of both species. Additionally, the Typhoon imager was able to detect GFP fluorescence in both green and non-green tissues of Arabidopsis seedlings as well as in imbibed seeds, qualifying it as a high-throughput screening tool, which was further demonstrated by screening the seedlings of primary transformed T(0) seeds. Of the 30,000 germinating Arabidopsis seedlings screened, at least 69 GFP-positive lines were identified, accounting for an approximately 0.23% transformation efficiency. About 14,000 seedlings grown in 16 Petri plates could be screened within an hour, making the screening process significantly more efficient and robust than any other existing high-throughput screening method for transgenic plants.

The UV Sensor Onboard the Mars Science Laboratory Mission: Correction and Generation of UV Fluxes

NASA Astrophysics Data System (ADS)

Vicente-Retortillo, Á.; Martinez, G.; Renno, N. O.; Lemmon, M. T.; Gomez-Elvira, J.

2017-12-01

The Rover Environmental Monitoring Station UV sensor (UVS) onboard the Mars Science Laboratory mission has completed more than 1750 sols of measurements, providing an unprecedented coverage ranging from diurnal to interannual times scales [1,2]. The UVS is comprised of six photodiodes to measure the UV flux in the ranges 200-380, 320-380, 280-320, 200-280, 230-290 and 300-350 nm [3]. UV fluxes in units of W/m2 can be found in the NASA Planetary Data System (PDS). However, dust deposition on the UVS and a non-physical discontinuity in the calibration functions when the solar zenith angle is above 30º cause errors in these fluxes that increase with time. We have developed a technique to correct UV fluxes from the effects of dust degradation and inconsistencies in the angular response of the UVS. The photodiode output currents (available in the PDS as lower-level TELRDR products), ancillary data records (available in the PDS as ADR products) and dust opacity values derived from Mastcam observations are used for performing the corrections. The corrections have been applied to the UVA band (320-380 nm) for the first 1000 sols of the mission, providing excellent results [4]. We plan to correct the UV fluxes on each of the six UVS bands and to make these results available in the PDS. Data products generated by this study will allow comparisons of the UV radiation environment at Gale crater with that at the locations of the future missions ExoMars 2020 and Mars 2020, as well as the assessment of the potential survivability of biological contaminants brought to Mars from Earth. References: [1] Smith, M. D., et al. (2016), Aerosol optical depth as observed by the Mars Science Laboratory REMS UV photodiodes, Icarus, 280, 234-248. [2] Vicente-Retortillo, Á., et al. (2017), Determination of dust aerosol particle size at Gale Crater using REMS UVS and Mastcam measurements, Geophys. Res. Lett., 44, 3502-3508. [3] Gómez-Elvira, J., et al. (2012), REMS: The environmental sensor suite for the Mars Science Laboratory rover, Space Sci. Rev. 170 (1-4), 583-640. [4] Martínez, G.M., et al. (2017), Generation of UV Radiation Data at Gale Crater by Correcting REMS UV Measurements from Dust Deposition and Sensor's Angular Response, LPSC 48.

Defocused Imaging of UV-Driven Surface-Bound Molecular Motors.

PubMed

Krajnik, Bartosz; Chen, Jiawen; Watson, Matthew A; Cockroft, Scott L; Feringa, Ben L; Hofkens, Johan

2017-05-31

Synthetic molecular motors continue to attract great interest due to their ability to transduce energy into nanomechanical motion, the potential to do work and drive systems out-of-equilibrium. Of particular interest are unidirectional rotary molecular motors driven by chemical fuel or light. Probing the mechanistic details of their operation at the single-molecule level is hampered by the diffraction limit, which prevents the collection of dynamic positional information by traditional optical methods. Here, we use defocused wide-field imaging to examine the unidirectional rotation of individual molecular rotary motors on a quartz surface in unprecedented detail. The sequential occupation of nanomechanical states during the UV and heat-induced cycle of rotation are directly imaged in real-time. The approach will undoubtedly prove important in elucidating the mechanistic details and assessing the utility of novel synthetic molecular motors in the future.

A novel mixed-metal borate with large [B12O18(OH)6]6- motif: Synthesis, structure and property

NASA Astrophysics Data System (ADS)

Wei, Li; Pan, Jie; Xue, Zhen-Zhen; Wang, Guo-Ming; Wang, Ying-Xia

2018-01-01

A new mixed-metal polyborate, Na5Li[B12O18(OH)6]·2H2O (1), has been synthesized using solvothermal method and characterized by IR spectroscopy, thermogravimetric analysis, UV-Vis spectroscopy, powder and single-crystal X-ray diffraction, respectively. It crystallizes in the trigonal space group R-3c (No. 167) with unit cell parameters of a = b = 9.6767(6) Å, c = 36.358(5) Å, and Z = 6. Its structure features unprecedented 3D framework constructed from novel honeycomb-shaped inorganic Na-O sheets with unique 12-MR sodium rings and supramolecular polyborate 2D layers of lithium-centered [B12O18(OH)6]6-. UV-Vis spectral characterization indicates that compound 1 is a wide-band-gap semiconductor.

Does the ANSI Z80.3 nonprescription sunglass and fashion eyewear standard go far enough?

PubMed

Barker, F M

1990-06-01

The recent public concern regarding sunglass protection from UV energy has sparked a significant debate among those in the research community and industry. This debate grows out of concern for the known effects of UV energy in producing or contributing to eye effects such as keratitis, cataract formation, and retinal damage. The ANSI Z80.3 Standard addresses itself to this issue by setting levels of UV energy that are permitted to be transmitted in various labeling categories for over-the-counter sunlenses. One important issue is that the ANSI Standard does not provide for an absolute block of UV energy in any category of these lenses. Because the technology to provide this sort of total UV block is currently available, it is argued that there should be at least one category of lens that is fully protective in the UV range.

PhyLM: A Mission Design Concept for an Optical/Lidar Instrument to Measure Ocean Productivity and Aerosols from Space

NASA Technical Reports Server (NTRS)

Gervin, Janette C.; Behrenfeld, Michael; McClain, Charles R.; Spinhirne, James; Purves, Lloyd; Wood, H. John; Roberto, Michael R.

2004-01-01

The Physiology Lidar-Multispectral Mission (PhyLM) is intended to explore the complex ecosystems of our global oceans. New "inversion" methods and improved understanding of marine optics have opened the door to quantifying a range of critical ocean properties. This new information could revolutionize our understanding of global ocean processes, such as phytoplankton growth, harmful algal blooms, carbon fluxes between major pools and the productivity equation. The new science requires new measurements not addressed by currently planned space missions. PhyLM will combine active and advanced passive remote sensing technologies to quantify standing stocks and fluxes of climate-critical components of the Ocean carbon cycle to meet these science providing multispectral bands from the far UV through the near infrared (340 - 1250 nm) at a ground resolution of 250 m. Improved detectors, filters, mirrors, digitization and focal plane design will offer an overall higher-quality data product. The unprecedented accuracy and precision of the absolute water-leaving radiances will support inversion- based quantification of an expanded set of ocean carbon cycle components. The dual- wavelength (532 & 1064 nm) Nd:Yag Lidar will enhance the accuracy and precision of the passive data by providing aerosol profiles for atmospheric correction and coincident active measurements of backscattering. The Lidar will also examine dark-side fluorescence as an additional approach to quantifying phytoplankton biomass in highly productive regions.

Sleuthing the Dynamo: the Final Frontier

NASA Astrophysics Data System (ADS)

Ayres, Thomas

1996-07-01

Innovative technologies are opening new windows into the Sun;from its hidden interior to the far reaches of its turbulentouter envelope: rare-earth detectors for solar neutrinos; theGONG project for helioseismology; SOHO for high-resolutionXUV spectroscopy, and YOHKOH for coronal X-ray imaging. Atthe same time, a fleet of space observatories--ROSAT, EUVE,ASCA, and HST itself--are providing unprecedented views ofthe vacuum-UV and X-ray emissions of stars in our Galacticneighborhood. These seemingly unrelated developments are infact deeply connected. A central issue of solar-stellarphysics is the nature and origin of magnetic activity: thelink between the interior dynamics of a late-type star and theviolent state of its outermost coronal layers. As solarphysicists are unlocking the secrets of the hydromagneticDynamo deep inside the Sun, we and others have beendocumenting the early evolution of the Dynamo and itsassociated external gas-dynamic activity. In particular, wehave obtained HST/FOS spectra of ten young solar-type starsin three nearby open clusters--the Hyades, Pleiades, andAlpha Persei--ranging in age from 50 Myr to 600 Myr. We havesupplemented the HST spectroscopy with deep ROSAT pointings, and ground-based studies. Here, we will continue the HSTside of our project by obtaining FUV spectra of two AlphaPerseids from our original program (but not yet observed),and high-S/N follow-up measurements of the hyperactive PleiadH II 314.

Emission measures derived from far ultraviolet spectra of T Tauri stars

NASA Astrophysics Data System (ADS)

Cram, L. E.; Giampapa, M. S.; Imhoff, C. L.

1980-06-01

Spectroscopic diagnostics based on UV emission line observations have been developed to study the solar chromosphere, transition region, and corona. The atmospheric properties that can be inferred from observations of total line intensities include the temperature, by identifying the ionic species present; the temperature distribution of the emission measure, from the absolute intensities; and the electron density of the source, from line intensity ratios sensitive to the electron density. In the present paper, the temperature distribution of the emission measure is estimated from observations of far UV emission line fluxes of the T Tauri stars, RW Aurigae and RU Lupi, made on the IUE. A crude estimate of the electron density of one star is obtained, using density-sensitive line ratios.

Adverse Outcome Pathways – Organizing Toxicological Information to Improve Decision Making

EPA Science Inventory

The number of chemicals for which environmental regulatory decisions are required far exceeds the current capacity for toxicity testing. High throughput screening (HTS) commonly used for drug discovery has the potential to increase this capacity. The adverse outcome pathway (AOP)...

Evaluation of a pulsed xenon ultraviolet light device for isolation room disinfection in a United Kingdom hospital.

PubMed

Hosein, Ian; Madeloso, Rosie; Nagaratnam, Wijayaratnam; Villamaria, Frank; Stock, Eileen; Jinadatha, Chetan

2016-09-01

Pathogen transmission from contaminated surfaces can cause hospital-associated infections. Although pulsed xenon ultraviolet (PX-UV) light devices have been shown to decrease hospital room bioburden in the United States, their effectiveness in United Kingdom (UK) hospitals is less understood. Forty isolation rooms at the Queens Hospital (700 beds) in North London, UK, were sampled for aerobic bacteria after patient discharge, after manual cleaning with a hypochlorous acid-troclosene sodium solution, and after PX-UV disinfection. PX-UV device efficacy on known organisms was tested by exposing inoculated agar plates in a nonpatient care area. Turnaround times for device usage were recorded, and a survey of hospital staff for perceptions of the device was undertaken. After PX-UV disinfection, the bacterial contamination measured in colony forming units (CFU) decreased by 78.4%, a 91% reduction from initial bioburden levels prior to terminal cleaning. PX-UV exposure resulted in a 5-log CFU reduction for multidrug-resistant organisms (MDROs) on spiked plates. The average device turnaround time was 1 hour, with minimal impact on patient throughput. Ward staff were enthusiastic about device deployment, and device operators reported physical comfort in usage. PX-UV use decreased bioburden in patient discharge rooms and on agar plates spiked with MDROs. The implementation of the PX-UV device was well received by hospital cleaning and ward staff, with minimal disruption to patient flow. Copyright © 2016 Association for Professionals in Infection Control and Epidemiology, Inc. All rights reserved.

Towards universal hybrid star formation rate estimators

NASA Astrophysics Data System (ADS)

Boquien, M.; Kennicutt, R.; Calzetti, D.; Dale, D.; Galametz, M.; Sauvage, M.; Croxall, K.; Draine, B.; Kirkpatrick, A.; Kumari, N.; Hunt, L.; De Looze, I.; Pellegrini, E.; Relaño, M.; Smith, J.-D.; Tabatabaei, F.

2016-06-01

Context. To compute the star formation rate (SFR) of galaxies from the rest-frame ultraviolet (UV), it is essential to take the obscuration by dust into account. To do so, one of the most popular methods consists in combining the UV with the emission from the dust itself in the infrared (IR). Yet, different studies have derived different estimators, showing that no such hybrid estimator is truly universal. Aims: In this paper we aim at understanding and quantifying what physical processes fundamentally drive the variations between different hybrid estimators. In so doing, we aim at deriving new universal UV+IR hybrid estimators to correct the UV for dust attenuation at local and global scales, taking the intrinsic physical properties of galaxies into account. Methods: We use the CIGALE code to model the spatially resolved far-UV to far-IR spectral energy distributions of eight nearby star-forming galaxies drawn from the KINGFISH sample. This allows us to determine their local physical properties, and in particular their UV attenuation, average SFR, average specific SFR (sSFR), and their stellar mass. We then examine how hybrid estimators depend on said properties. Results: We find that hybrid UV+IR estimators strongly depend on the stellar mass surface density (in particular at 70 μm and 100 μm) and on the sSFR (in particular at 24 μm and the total infrared). Consequently, the IR scaling coefficients for UV obscuration can vary by almost an order of magnitude: from 1.55 to 13.45 at 24 μm for instance. This result contrasts with other groups who found relatively constant coefficients with small deviations. We exploit these variations to construct a new class of adaptative hybrid estimators based on observed UV to near-IR colours and near-IR luminosity densities per unit area. We find that they can reliably be extended to entire galaxies. Conclusions: The new estimators provide better estimates of attenuation-corrected UV emission than classical hybrid estimators published in the literature. Taking naturally variable impact of dust heated by old stellar populations into account, they constitute an important step towards universal estimators.

A Rare Encounter with Very Massive Stars in NGC 3125-A1

NASA Astrophysics Data System (ADS)

Wofford, Aida; Leitherer, Claus; Chandar, Rupali; Bouret, Jean-Claude

2014-02-01

Super star cluster A1 in the nearby starburst galaxy NGC 3125 is characterized by broad He II λ1640 emission (FWHM ~ 1200 km s-1) of unprecedented strength (equivalent width, EW = 7.1 ± 0.4 Å). Previous attempts to characterize the massive star content in NGC 3125-A1 were hampered by the low resolution of the UV spectrum and the lack of co-spatial panchromatic data. We obtained far-UV to near-IR spectroscopy of the two principal emitting regions in the galaxy with the Space Telescope Imaging Spectrograph and the Cosmic Origins Spectrograph on board the Hubble Space Telescope. We use these data to study three clusters in the galaxy, A1, B1, and B2. We derive cluster ages of 3-4 Myr, intrinsic reddenings of E(B - V) = 0.13, 0.15, and 0.13, and cluster masses of 1.7 × 105, 1.4 × 105, and 1.1 × 105 M ⊙, respectively. A1 and B2 show O V λ1371 absorption from massive stars, which is rarely seen in star-forming galaxies, and have Wolf-Rayet (WR) to O star ratios of N(WN5-6)/N(O) = 0.23 and 0.10, respectively. The high N(WN5-6)/N(O) ratio of A1 cannot be reproduced by models that use a normal initial mass function (IMF) and generic WR star line luminosities. We rule out that the extraordinary He II λ1640 emission and O V λ1371 absorption of A1 are due to an extremely flat upper IMF exponent, and suggest that they originate in the winds of very massive (>120 M ⊙) stars. In order to reproduce the properties of peculiar clusters such as A1, the present grid of stellar evolution tracks implemented in Starburst99 needs to be extended to masses >120 M ⊙.

Ultraviolet laser effects on the cornea

NASA Astrophysics Data System (ADS)

Zuclich, Joseph A.

1990-07-01

Ultraviolet radiation in the ambient environment or from artificial sources may pose both acute and chronic hazards to the skin and the ocular tissues. In general terrestrial conditions have evolved such that there are only narrow safety margins between ambient UV levels and exposure levels harmful to the human. Obvious examples of acute consequences ofUV overexposure are sunburn and snowblindness as well as analogous conditions induced by artificial sources such as the welder''s arc mercury vapor lamps and UV-emitting lasers. Further chronic UV exposure is strongly implicated as a causative agent in certain types of cataract and skin cancer. This presentation will summarize a number of specific cases where UV radiation affected the primate cornea. Data presented will include the action spectra for far- and near-UV induced ocular damage the pulsewidth and total energy dependencies of ocular thresholds studies of cumulative effects of repeated UV exposures and quantitative determinations of tissue repair or recovery rates. Depending on the exposure parameters utilized photochemical thermal or photoablative damage mechanisms may prevail. 1.

Nonlinear Optical Characterization of Membrane Protein Microcrystals and Nanocrystals.

PubMed

Newman, Justin A; Simpson, Garth J

2016-01-01

Nonlinear optical methods such as second harmonic generation (SHG) and two-photon excited UV fluorescence (TPE-UVF) imaging are promising approaches to address bottlenecks in the membrane protein structure determination pipeline. The general principles of SHG and TPE-UVF are discussed here along with instrument design considerations. Comparisons to conventional methods in high throughput crystallization condition screening and crystal quality assessment prior to X-ray diffraction are also discussed.

Digital One-Disc-One-Compound Method for High-Throughput Discovery of Prostate Cancer - Targeting Ligands

DTIC Science & Technology

2015-10-01

shown in Fig. 1a, the prepolymer mixture was sandwiched between photo mask and glass slide. Microdiscs were fabricated on the glass substrate through...polymerization of the prepolymer mixture and the acrylated silane under UV exposure. To achieve the more stable microdiscs for peptide synthesis, the...composition of prepolymer mixture was changed to PEG (Polyethylene Glycol)-diacrylate, crosslinker, photo initiator, 2-aminoethylmethacrylate, water

The Photostabilizing Effect of Grape Seed Extract on Three Common Sunscreen Absorbers.

PubMed

Martincigh, Bice S; Ollengo, Moses A

2016-11-01

The photostabilizing ability of grape seed extract on three common sunscreen absorbers, 2-ethylhexyl-p-methoxycinnamate (EHMC), benzophenone-3 (BP3) and tert-butylmethoxy dibenzoylmethane (BMDBM), was investigated. Samples were exposed to simulated solar radiation and monitored by spectrophotometric and chromatographic methods. The chemical composition of the grape seed extract was determined by GC-MS and HPLC-MS, and the major secondary metabolites were found to be epicatechin and catechin. Exposure of the extract to UV radiation increased the UV absorption capacity of the extract. All sunscreens showed an improved photostability in the extract. The inherent photo-instability of BMDBM when exposed to UV radiation was almost eliminated in the presence of grape seed extract. A mixture of all three sunscreens in the extract showed very high photostability and a red shift covering the entire UVB and UVA regions, thereby improving the broad-spectrum protection. The incorporation of grape seed extract in sunscreen and other cosmetic formulations for topical application boosts photoprotection by stabilizing the UV filters and enhancing broad-spectrum coverage. This in turn helps in reducing the amounts of absorbers and other additives incorporated in a sunscreen product and consequently lowers the risk of an unprecedented buildup of photoproducts whose toxicities are currently unknown. © 2016 The American Society of Photobiology.

Adaptation of a Simple Microfluidic Platform for High-Dimensional Quantitative Morphological Analysis of Human Mesenchymal Stromal Cells on Polystyrene-Based Substrates.

PubMed

Lam, Johnny; Marklein, Ross A; Jimenez-Torres, Jose A; Beebe, David J; Bauer, Steven R; Sung, Kyung E

2017-12-01

Multipotent stromal cells (MSCs, often called mesenchymal stem cells) have garnered significant attention within the field of regenerative medicine because of their purported ability to differentiate down musculoskeletal lineages. Given the inherent heterogeneity of MSC populations, recent studies have suggested that cell morphology may be indicative of MSC differentiation potential. Toward improving current methods and developing simple yet effective approaches for the morphological evaluation of MSCs, we combined passive pumping microfluidic technology with high-dimensional morphological characterization to produce robust tools for standardized high-throughput analysis. Using ultraviolet (UV) light as a modality for reproducible polystyrene substrate modification, we show that MSCs seeded on microfluidic straight channel devices incorporating UV-exposed substrates exhibited morphological changes that responded accordingly to the degree of substrate modification. Substrate modification also effected greater morphological changes in MSCs seeded at a lower rather than higher density within microfluidic channels. Despite largely comparable trends in morphology, MSCs seeded in microscale as opposed to traditional macroscale platforms displayed much higher sensitivity to changes in substrate properties. In summary, we adapted and qualified microfluidic cell culture platforms comprising simple straight channel arrays as a viable and robust tool for high-throughput quantitative morphological analysis to study cell-material interactions.

Throughput Maximization for Sensor-Aided Cognitive Radio Networks with Continuous Energy Arrivals

PubMed Central

Nguyen, Thanh-Tung; Koo, Insoo

2015-01-01

We consider a Sensor-Aided Cognitive Radio Network (SACRN) in which sensors capable of harvesting energy are distributed throughout the network to support secondary transmitters for sensing licensed channels in order to improve both energy and spectral efficiency. Harvesting ambient energy is one of the most promising solutions to mitigate energy deficiency, prolong device lifetime, and partly reduce the battery size of devices. So far, many works related to SACRN have considered single secondary users capable of harvesting energy in whole slot as well as short-term throughput. In the paper, we consider two types of energy harvesting sensor nodes (EHSN): Type-I sensor nodes will harvest ambient energy in whole slot duration, whereas type-II sensor nodes will only harvest energy after carrying out spectrum sensing. In the paper, we also investigate long-term throughput in the scheduling window, and formulate the throughput maximization problem by considering energy-neutral operation conditions of type-I and -II sensors and the target detection probability. Through simulations, it is shown that the sensing energy consumption of all sensor nodes can be efficiently managed with the proposed scheme to achieve optimal long-term throughput in the window. PMID:26633393

Copernicus studies of interstellar material in the Perseus II complex. III - The line of sight to Zeta Persei

NASA Technical Reports Server (NTRS)

Snow, T. P., Jr.

1977-01-01

Ultraviolet spectrophotometric data obtained with Copernicus are used to analyze the distribution, composition, density, temperature, and kinematics of the interstellar material along the line of sight to Zeta Persei. The far-UV extinction curve for the star is evaluated along with the kinematics of the interstellar gas, observations of atomic and molecular hydrogen, curves of growth for neutral and ionized species, atomic abundances and depletions, ionization equilibria, and observations of CO and OH lines. The results show that there are apparently three clouds along the line of sight to Zeta Persei: a main cloud at approximately +13 km/s which contains most of the material and forms all the neutral and molecular lines as well as most of the ionic lines, a second component at +22 km/s which must contribute to the strong UV lines of most ions, and a third component at roughly +2 km/s which gives rise to a strong Si III line at 1206 A. It is also found that the UV extinction curve has a somewhat steep far-UV rise, indicating the presence of a substantial number of small grains, and that about 30% of the hydrogen nuclei over the entire line of sight are in molecular form.

The influence of light quality on the accumulation of flavonoids in tobacco (Nicotiana tabacum L.) leaves.

PubMed

Fu, Bo; Ji, Xiaoming; Zhao, Mingqin; He, Fan; Wang, Xiaoli; Wang, Yiding; Liu, Pengfei; Niu, Lu

2016-09-01

Flavonoids are important secondary metabolites in plants regulated by the environment. To analyze the effect of light quality on the accumulation of flavonoids, we performed a rapid analysis of flavonoids in extracts of tobacco leaves using UHPLC-QTOF. A total of 12 flavonoids were detected and identified in tobacco leaves, which were classified into flavonoid methyl derivatives and flavonoid glycoside derivatives according to the groups linked to the flavonoid core. Correlation analysis was further conducted to investigate the effect of different wavelengths of light on their accumulation. The content of flavonoid methyl derivatives was positively correlated with the proportions of far-red light (FR; 716-810nm) and near-infrared light (NIR; 810-2200nm) in the sunlight spectrum and negatively correlated with the proportion of ultraviolet (UV-A; 350-400nm) and the red/far-red ratio (R/FR). By contrast, the content of flavonoid glycoside derivatives was positively correlated with the proportion of UV-A and the R/FR, and negatively correlated with FR and NIR. The results indicated that light quality with higher proportions of FR and NIR increases the activity of flavonoid methyltransferases but suppresses the activity of flavonoid glycoside transferases. While a high proportion of UV-A and a high R/FR can increase flavonoid glycoside transferase activity but suppress flavonoid methyltransferase activity. Copyright © 2016 Elsevier B.V. All rights reserved.

A comparison of UV surface brightness and HI surface densities for spiral galaxies

NASA Technical Reports Server (NTRS)

Federman, S. R.; Strom, C.

1990-01-01

Shaya and Federman (1987) suggested that the ambient ultraviolet flux at 1000 A permeating a spiral galaxy controls the neutral hydrogen (HI) surface density in the galaxy. They found that the atomic envelopes surrounding small molecular clouds, because of their great number, provide the major contribution to the HI surface density over the stellar disk. The increase in HI surface density with later Hubble types was ascribed to the stronger UV fields from more high-mass stars in later Hubble types. These hypotheses are based on the observations of nearby diffuse interstellar clouds, which show a sharp atomic-to-molecular transition (Savage et al. 1977), and on the theoretical framework introduced by Federman, Glassgold, and Kwan (1979). Atomic envelopes around interstellar clouds in the solar neighborhood arise when a steady state is reached between photodissociation of H2 and the formation of H2 on grains. The photodissociation process involves photons with wavelengths between 912 A and 1108 A. Shaya and Federman used H-alpha flux as an approximate measure for the far UV flux and made their comparisons based on averages over Hubble type. Here, researchers compare, on an individual basis, UV data obtained with space-borne and balloon-borne instruments for galaxies with measurements of HI surface density (Warmels 1988a, b). The comparisons substantiate the conclusion of Shaya and Federman that the far UV field controls the HI content of spiral galaxies.

Shrink-induced sorting using integrated nanoscale magnetic traps.

PubMed

Nawarathna, Dharmakeerthi; Norouzi, Nazila; McLane, Jolie; Sharma, Himanshu; Sharac, Nicholas; Grant, Ted; Chen, Aaron; Strayer, Scott; Ragan, Regina; Khine, Michelle

2013-02-11

We present a plastic microfluidic device with integrated nanoscale magnetic traps (NSMTs) that separates magnetic from non-magnetic beads with high purity and throughput, and unprecedented enrichments. Numerical simulations indicate significantly higher localized magnetic field gradients than previously reported. We demonstrated >20 000-fold enrichment for 0.001% magnetic bead mixtures. Since we achieve high purity at all flow-rates tested, this is a robust, rapid, portable, and simple solution to sort target species from small volumes amenable for point-of-care applications. We used the NSMT in a 96 well format to extract DNA from small sample volumes for quantitative polymerase chain reaction (qPCR).

Direct Measurement of Trace Elemental Mercury in Hydrocarbon Matrices by Gas Chromatography with Ultraviolet Photometric Detection.

PubMed

Gras, Ronda; Luong, Jim; Shellie, Robert A

2015-11-17

We introduce a technique for the direct measurement of elemental mercury in light hydrocarbons such as natural gas. We determined elemental mercury at the parts-per-trillion level with high precision [<3% RSD (n = 20 manual injection)] using gas chromatography with ultraviolet photometric detection (GC-UV) at 254 nm. Our approach requires a small sample volume (1 mL) and does not rely on any form of sample preconcentration. The GC-UV separation employs an inert divinylbenzene porous layer open tubular column set to separate mercury from other components in the sample matrix. We incorporated a 10-port gas-sampling valve in the GC-UV system, which enables automated sampling, as well as back flushing capability to enhance system cleanliness and sample throughput. Total analysis time is <2 min, and the procedure is linear over a range of 2-83 μg/m(3) [correlation coefficient of R(2) = 0.998] with a measured recovery of >98% over this range.

Optofluidic fabrication for 3D-shaped particles

NASA Astrophysics Data System (ADS)

Paulsen, Kevin S.; di Carlo, Dino; Chung, Aram J.

2015-04-01

Complex three-dimensional (3D)-shaped particles could play unique roles in biotechnology, structural mechanics and self-assembly. Current methods of fabricating 3D-shaped particles such as 3D printing, injection moulding or photolithography are limited because of low-resolution, low-throughput or complicated/expensive procedures. Here, we present a novel method called optofluidic fabrication for the generation of complex 3D-shaped polymer particles based on two coupled processes: inertial flow shaping and ultraviolet (UV) light polymerization. Pillars within fluidic platforms are used to deterministically deform photosensitive precursor fluid streams. The channels are then illuminated with patterned UV light to polymerize the photosensitive fluid, creating particles with multi-scale 3D geometries. The fundamental advantages of optofluidic fabrication include high-resolution, multi-scalability, dynamic tunability, simple operation and great potential for bulk fabrication with full automation. Through different combinations of pillar configurations, flow rates and UV light patterns, an infinite set of 3D-shaped particles is available, and a variety are demonstrated.

Sensitive far uv spectrograph with a multispectral element microchannel plate detector for rocket-borne astronomy.

PubMed

Weiser, H; Vitz, R C; Moos, H W; Weinstein, A

1976-12-01

An evacuated high transmission prism spectrograph using a microchannel plate detection system with resistive strip readout was flown behind a precision pointing telescope on a sounding rocket. The construction, preparation, flight performance, and calibration stability of the system are discussed. Despite the adverse environmental conditions associated with sounding rocket flights, the microchannel detector system performed well. Far uv spectra (1160-1750 A) of stellar and planetary objects were obtained; spectral features with fluxes as low as 0.06 photons cm(-2) sec(-1) were detectable. This was achieved by operating the plates at lower than normal gains, using sensitive pulse counting electronics with both upper and lower limit discriminators, and maintaining the spectrograph and detector at a pressure of ~10(-6) Torr until reaching altitude.

Atlas of reflectance spectra of terrestrial, lunar, and meteoritic powders and frosts from 92 to 1800 nm

NASA Technical Reports Server (NTRS)

Wagner, Jeffrey K.; Hapke, Bruce W.; Wells, Eddie N.

1987-01-01

The spectra of samples of several powder and frost materials are presented to serve in a reference database for future far-UV scans of solar system bodies. The spectra cover in the 92-1800 nm wavelengths, i.e., wavenumbers 110,000-5600/cm and photon energies from 13.5-1.5 eV. Preparation procedures for the particulates are delineated. The survey includes feldspars, orthopyroxenes, clinopyroxenes, olivines, assorted minerals, achondrites, carbonaceous chondrites and ordinary chondrites, lunar soils and rocks. Frosts of H2O, CO2, NH3 and SO2 gases were also examined. The data are expected to aid in obtaining spectral matches for asteroids and meteoroids when far-UV telescopy of solar system bodies is performed.

Probing Minor-merger-driven Star Formation In Early-type Galaxies Using Spatially-resolved Spectro-photometric Studies

NASA Astrophysics Data System (ADS)

Kaviraj, Sugata; Crockett, M.; Silk, J.; O'Connell, R. W.; Whitmore, B.; Windhorst, R.; Cappellari, M.; Bureau, M.; Davies, R.

2012-01-01

Recent studies that leverage the rest-frame ultraviolet (UV) spectrum have revealed widespread recent star formation in early-type galaxies (ETGs), traditionally considered to be old, passively-evolving systems. This recent star formation builds 20% of the ETG stellar mass after z 1, driven by repeated minor mergers between ETGs and small, gas-rich satellites. We demonstrate how spatially-resolved studies, using a combination of high-resolution UV-optical imaging and integral-field spectroscopy (IFS), is a powerful tool to quantify the assembly history of individual ETGs and elucidate the poorly-understood minor-merger process. Using a combination of WFC3 UV-optical (2500-8200 angstroms) imaging and IFS from the SAURON project of the ETG NGC 4150, we show that this galaxy experienced a merger with mass ratio 1:15 around 0.9 Gyr ago, which formed 3% of its stellar mass and a young kinematically-decoupled core. A UV-optical analysis of its globular cluster system shows that the bulk of the stars locked up in these clusters likely formed 6-7 Gyrs in the past. We introduce a new HST-WFC3 programme, approved in Cycle 19, which will leverage similar UV-optical imaging of a representative sample of nearby ETGs from SAURON to study the recent star formation and its drivers in unprecedented detail and put definitive constraints on minor-merger-driven star formation in massive galaxies at late epochs.

Time-resolved analysis of DNA-protein interactions in living cells by UV laser pulses.

PubMed

Nebbioso, Angela; Benedetti, Rosaria; Conte, Mariarosaria; Carafa, Vincenzo; De Bellis, Floriana; Shaik, Jani; Matarese, Filomena; Della Ventura, Bartolomeo; Gesuele, Felice; Velotta, Raffaele; Martens, Joost H A; Stunnenberg, Hendrik G; Altucci, Carlo; Altucci, Lucia

2017-09-15

Interactions between DNA and proteins are mainly studied through chemical procedures involving bi-functional reagents, mostly formaldehyde. Chromatin immunoprecipitation is used to identify the binding between transcription factors (TFs) and chromatin, and to evaluate the occurrence and impact of histone/DNA modifications. The current bottleneck in probing DNA-protein interactions using these approaches is caused by the fact that chemical crosslinkers do not discriminate direct and indirect bindings or short-lived chromatin occupancy. Here, we describe a novel application of UV laser-induced (L-) crosslinking and demonstrate that a combination of chemical and L-crosslinking is able to distinguish between direct and indirect DNA-protein interactions in a small number of living cells. The spatial and temporal dynamics of TF bindings to chromatin and their role in gene expression regulation may thus be assessed. The combination of chemical and L-crosslinking offers an exciting and unprecedented tool for biomedical applications.

Fast and accurate enzyme activity measurements using a chip-based microfluidic calorimeter.

PubMed

van Schie, Morten M C H; Ebrahimi, Kourosh Honarmand; Hagen, Wilfred R; Hagedoorn, Peter-Leon

2018-03-01

Recent developments in microfluidic and nanofluidic technologies have resulted in development of new chip-based microfluidic calorimeters with potential use in different fields. One application would be the accurate high-throughput measurement of enzyme activity. Calorimetry is a generic way to measure activity of enzymes, but unlike conventional calorimeters, chip-based calorimeters can be easily automated and implemented in high-throughput screening platforms. However, application of chip-based microfluidic calorimeters to measure enzyme activity has been limited due to problems associated with miniaturization such as incomplete mixing and a decrease in volumetric heat generated. To address these problems we introduced a calibration method and devised a convenient protocol for using a chip-based microfluidic calorimeter. Using the new calibration method, the progress curve of alkaline phosphatase, which has product inhibition for phosphate, measured by the calorimeter was the same as that recorded by UV-visible spectroscopy. Our results may enable use of current chip-based microfluidic calorimeters in a simple manner as a tool for high-throughput screening of enzyme activity with potential applications in drug discovery and enzyme engineering. Copyright © 2017. Published by Elsevier Inc.

Ultraviolet imaging telescope and optical emission-line observations of H II regions in M81

NASA Technical Reports Server (NTRS)

Hill, Jesse K.; Cheng, K.-P.; Bohlin, Ralph C.; Cornett, Robert H.; Hintzen, P. M. N.; O'Connell, Robert W.; Roberts, Morton S.; Smith, Andrew M.; Smith, Eric P.; Stecher, Theodore P.

1995-01-01

Images of the type Sab spiral galaxy M81 were obtained in far-UV and near-UV bands by the Ultraviolet Imaging Telescope (UIT) during the Astro-1 Spacelab mission of 1990 December. Magnitudes in the two UV bands are determined for 52 H II regions from the catalog of Petit, Sivan, & Karachentsev (1988). Fluxes of the H-alpha and H-beta emission lines are determined from CCD images. Extinctions for the brightest H II regions are determined from observed Balmer decrements. Fainter H II regions are assigned the average of published radio-H-alpha extinctions for several bright H II regions. The radiative transfer models of Witt, Thronson, & Capuano (1992) are shown to predict a relationship between Balmer Decrement and H-alpha extinction consistent with observed line and radio fluxes for the brightest 7 H II regions and are used to estimate the UV extinction. Ratios of Lyman continuum with ratios predicted by model spectra computed for initial mass function (IMF) slope equal to -1.0 and stellar masses ranging from 5 to 120 solar mass. Ages and masses are estimated by comparing the H-alpha and far-UV fluxes and their ratio with the models. The total of the estimated stellar masses for the 52 H II regions is 1.4 x 10(exp 5) solar mass. The star-formation rate inferred for M81 from the observed UV and H-alpha fluxes is low for a spiral galaxy at approximately 0.13 solar mass/yr, but consistent with the low star-formation rates obtained by Kennicutt (1983) and Caldwell et al. (1991) for early-type spirals.

Copernicus ultraviolet observations of mass-loss effects in O and B stars

NASA Technical Reports Server (NTRS)

Snow, T. P., Jr.; Morton, D. C.

1976-01-01

Far-UV spectra of 47 O, B, and A stars obtained with the Copernicus satellite are examined for P Cygni profiles. For all 40 stars with displaced absorption lines, values are given for the velocities of the short-wavelength edge, the line center, and the emission peak (if present). Parts of the spectra of 42 stars are reproduced, evidence for mass motions in ground-based spectra is discussed, and the best available data are summarized on the wavelengths and oscillator strengths of most lines likely to show mass-loss effects in either visual or UV spectra. The main conclusions are that: (1) the far-UV transitions, especially resonance lines, show that mass flow is present over a much wider group of stars than revealed by visible data on subordinate lines; (2) most of the line shifts imply mass motion away from the stars; (3) mass flow occurs in all but one star brighter than a bolometric magnitude of -6.0; and (4) the observed terminal velocities generally exhibit no significant correlation with temperature, luminosity, gravity, rotational velocity, or line strength.

Modeling Dust in the Magellanic Clouds

NASA Astrophysics Data System (ADS)

Zonca, Alberto; Casu, Silvia; Mulas, Giacomo; Aresu, Giambattista; Cecchi-Pestellini, Cesare

2015-09-01

We model the extinction profiles observed in the Small and Large Magellanic clouds with a synthetic population of dust grains consisting of core-mantle particles and a collection of free-flying polycyclic aromatic hydrocarbons (PAHs). All different flavors of the extinction curves observed in the Magellanic Clouds (MCs) can be described by the present model, which has been previously (successfully) applied to a large sample of diffuse and translucent lines of sight in the Milky Way. We find that in the MCs the extinction produced by classical grains is generally larger than absorption by PAHs. Within this model, the nonlinear far-UV rise is accounted for by PAHs, whose presence in turn is always associated with a gap in the size distribution of classical particles. This hints either at a physical connection between (e.g., a common cause for) PAHs and the absence of middle-sized dust particles or the need for an additional component in the model that can account for the nonlinear far-UV rise without contributing to the UV bump at ∼217 nm such as, e.g., nanodiamonds.

Large Aperture Multiplexed Diffractive Lidar Optics

NASA Technical Reports Server (NTRS)

Rallison, Richard D.; Schwemmer, Geary K. (Technical Monitor)

1999-01-01

We have delivered only 2 or 3 UV Holographic Optical Elements (HOEs) thus far and have fallen short of the intended goal in size and in dual wavelength function. Looking back, it has been fortuitous that we even made anything work in the UV region. It was our good fortune to discover that the material we work with daily was adequate for use at 355 nm, if well rinsed during processing. If we had stuck to our original plan of etching in small pieces of fused silica, we would still be trying to make the first small section in our ion mill, which is not yet operational. The original plan was far too ambitious and would take another 2 years to complete beginning where we left off this time. In order to make a HOE for the IR as well as the UV we will likely have to learn to sensitize some film to the 1064 line and we have obtained sensitizer that is reported to work in that region already. That work would also take an additional year to complete.

Star-Forming Regions in Orion as a Dust Evolution Laboratory

NASA Astrophysics Data System (ADS)

Wiebe, D.; Murga, M.; Sivkova, E.

2017-06-01

Star-forming regions (SFR) represent a convenient opportunity to study various processes related both to dust growth and to dust destruction. While extragalactic SFRs allow considering these processes in a wide range of metallicities, UV field intensities, etc., the Orion star-forming complex opens up a possibility to observe dust evolution with an unprecedented angular resolution. We review various observations related to dust evolution in some most prominent Orion regions, paying special attention to organic dust evolution, and introduce a new model of organic dust evolution.

Experimental Design for Combinatorial and High Throughput Materials Development

NASA Astrophysics Data System (ADS)

Cawse, James N.

2002-12-01

In the past decade, combinatorial and high throughput experimental methods have revolutionized the pharmaceutical industry, allowing researchers to conduct more experiments in a week than was previously possible in a year. Now high throughput experimentation is rapidly spreading from its origins in the pharmaceutical world to larger industrial research establishments such as GE and DuPont, and even to smaller companies and universities. Consequently, researchers need to know the kinds of problems, desired outcomes, and appropriate patterns for these new strategies. Editor James Cawse's far-reaching study identifies and applies, with specific examples, these important new principles and techniques. Experimental Design for Combinatorial and High Throughput Materials Development progresses from methods that are now standard, such as gradient arrays, to mathematical developments that are breaking new ground. The former will be particularly useful to researchers entering the field, while the latter should inspire and challenge advanced practitioners. The book's contents are contributed by leading researchers in their respective fields. Chapters include: -High Throughput Synthetic Approaches for the Investigation of Inorganic Phase Space -Combinatorial Mapping of Polymer Blends Phase Behavior -Split-Plot Designs -Artificial Neural Networks in Catalyst Development -The Monte Carlo Approach to Library Design and Redesign This book also contains over 200 useful charts and drawings. Industrial chemists, chemical engineers, materials scientists, and physicists working in combinatorial and high throughput chemistry will find James Cawse's study to be an invaluable resource.

High performance computing environment for multidimensional image analysis

PubMed Central

Rao, A Ravishankar; Cecchi, Guillermo A; Magnasco, Marcelo

2007-01-01

Background The processing of images acquired through microscopy is a challenging task due to the large size of datasets (several gigabytes) and the fast turnaround time required. If the throughput of the image processing stage is significantly increased, it can have a major impact in microscopy applications. Results We present a high performance computing (HPC) solution to this problem. This involves decomposing the spatial 3D image into segments that are assigned to unique processors, and matched to the 3D torus architecture of the IBM Blue Gene/L machine. Communication between segments is restricted to the nearest neighbors. When running on a 2 Ghz Intel CPU, the task of 3D median filtering on a typical 256 megabyte dataset takes two and a half hours, whereas by using 1024 nodes of Blue Gene, this task can be performed in 18.8 seconds, a 478× speedup. Conclusion Our parallel solution dramatically improves the performance of image processing, feature extraction and 3D reconstruction tasks. This increased throughput permits biologists to conduct unprecedented large scale experiments with massive datasets. PMID:17634099

High performance computing environment for multidimensional image analysis.

PubMed

Rao, A Ravishankar; Cecchi, Guillermo A; Magnasco, Marcelo

2007-07-10

The processing of images acquired through microscopy is a challenging task due to the large size of datasets (several gigabytes) and the fast turnaround time required. If the throughput of the image processing stage is significantly increased, it can have a major impact in microscopy applications. We present a high performance computing (HPC) solution to this problem. This involves decomposing the spatial 3D image into segments that are assigned to unique processors, and matched to the 3D torus architecture of the IBM Blue Gene/L machine. Communication between segments is restricted to the nearest neighbors. When running on a 2 Ghz Intel CPU, the task of 3D median filtering on a typical 256 megabyte dataset takes two and a half hours, whereas by using 1024 nodes of Blue Gene, this task can be performed in 18.8 seconds, a 478x speedup. Our parallel solution dramatically improves the performance of image processing, feature extraction and 3D reconstruction tasks. This increased throughput permits biologists to conduct unprecedented large scale experiments with massive datasets.

Accelerated Combinatorial High Throughput Star Polymer Synthesis via a Rapid One-Pot Sequential Aqueous RAFT (rosa-RAFT) Polymerization Scheme.

PubMed

Cosson, Steffen; Danial, Maarten; Saint-Amans, Julien Rosselgong; Cooper-White, Justin J

2017-04-01

Advanced polymerization methodologies, such as reversible addition-fragmentation transfer (RAFT), allow unprecedented control over star polymer composition, topology, and functionality. However, using RAFT to produce high throughput (HTP) combinatorial star polymer libraries remains, to date, impracticable due to several technical limitations. Herein, the methodology "rapid one-pot sequential aqueous RAFT" or "rosa-RAFT," in which well-defined homo-, copolymer, and mikto-arm star polymers can be prepared in very low to medium reaction volumes (50 µL to 2 mL) via an "arm-first" approach in air within minutes, is reported. Due to the high conversion of a variety of acrylamide/acrylate monomers achieved during each successive short reaction step (each taking 3 min), the requirement for intermediary purification is avoided, drastically facilitating and accelerating the star synthesis process. The presented methodology enables RAFT to be applied to HTP polymeric bio/nanomaterials discovery pipelines, in which hundreds of complex polymeric formulations can be rapidly produced, screened, and scaled up for assessment in a wide range of applications. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Lifetime testing UV LEDs for use in the LISA charge management system

NASA Astrophysics Data System (ADS)

Hollington, D.; Baird, J. T.; Sumner, T. J.; Wass, P. J.

2017-10-01

As a future charge management light source, UV light-emitting diodes (UV LEDs) offer far superior performance in a range of metrics compared to the mercury lamps used in the past. As part of a qualification program a number of short wavelength UV LEDs have been subjected to a series of lifetime tests for potential use on the laser interferometer space antenna (LISA) mission. These tests were performed at realistic output levels for both fast and continuous discharging in either a DC or pulsed mode of operation and included a DC fast discharge test spanning 50 days, a temperature dependent pulsed fast discharge test spanning 21 days and a pulsed continuous discharge test spanning 507 days. Two types of UV LED have demonstrated lifetimes equivalent to over 25 years of realistic mission usage with one type providing a baseline for LISA and the other offering a backup solution.

Optical design for CETUS: a wide-field 1.5m aperture UV payload being studied for a NASA probe class mission study

NASA Astrophysics Data System (ADS)

Woodruff, Robert A.; Hull, Tony; Heap, Sara R.; Danchi, William; Kendrick, Stephen E.; Purves, Lloyd

2017-09-01

We are developing a NASA Headquarters selected Probe-class mission concept called the Cosmic Evolution Through UV Spectroscopy (CETUS) mission, which includes a 1.5-m aperture diameter large field-of-view (FOV) telescope optimized for UV imaging, multi-object spectroscopy, and point-source spectroscopy. The optical system includes a Three Mirror Anastigmatic (TMA) telescope that simultaneously feeds three separate scientific instruments: the near-UV (NUV) Multi-Object Spectrograph (MOS) with a next-generation Micro-Shutter Array (MSA); the two-channel camera covering the far-UV (FUV) and NUV spectrum; and the point-source spectrograph covering the FUV and NUV region with selectable R 40,000 echelle modes and R 2,000 first order modes. The optical system includes fine guidance sensors, wavefront sensing, and spectral and flat-field in-flight calibration sources. This paper will describe the current optical design of CETUS.

Optical design for CETUS: a wide-field 1.5m aperture UV payload being studied for a NASA probe class mission study

NASA Astrophysics Data System (ADS)

Woodruff, Robert; Robert Woodruff, Goddard Space Flight Center, Kendrick Optical Consulting

2018-01-01

We are developing a NASA Headquarters selected Probe-class mission concept called the Cosmic Evolution Through UV Spectroscopy (CETUS) mission, which includes a 1.5-m aperture diameter large field-of-view (FOV) telescope optimized for UV imaging, multi-object spectroscopy, and point-source spectroscopy. The optical system includes a Three Mirror Anastigmatic (TMA) telescope that simultaneously feeds three separate scientific instruments: the near-UV (NUV) Multi-Object Spectrograph (MOS) with a next-generation Micro-Shutter Array (MSA); the two-channel camera covering the far-UV (FUV) and NUV spectrum; and the point-source spectrograph covering the FUV and NUV region with selectable R~ 40,000 echelle modes and R~ 2,000 first order modes. The optical system includes fine guidance sensors, wavefront sensing, and spectral and flat-field in-flight calibration sources. This paper will describe the current optical design of CETUS.

Imaging Calorimeter: What Have We Learned So Far

NASA Astrophysics Data System (ADS)

Xia, Lei

Particle Flow Algorithms (PFAs) have been applied to existing detectors to improve the measurement of hadronic jets in colliding beam experiments. For future experiments, such as a TeV lepton collider, detector concepts optimized for the application of PFAs are being developed. These concepts require so-called imaging calorimeters, with unprecedented granularity. We will review the various recent developments of such highly granular calorimeters.

State Education Agencies as Agents of Change: What It Will Take for the States to Step Up on Education Reform

ERIC Educational Resources Information Center

Brown, Cynthia G.; Hess, Frederick M.; Lautzenheiser, Daniel K.; Owen, Isabel

2011-01-01

Today, state education agencies (SEAs) and their leaders face unprecedented demands. What was once a low-profile job of managing federal aid, providing curricular guidance, and ensuring compliance with various legal obligations is now a far more visible and politically fraught task. The new roles required of state education agencies due to the No…

Experimental and Observational Studies of Molecular Hydrogen in Interstellar and Circumstellar Environments

NASA Astrophysics Data System (ADS)

Hoadley, Keri

2017-08-01

Understanding the evolution of gas over the lifetime of protoplanetary disks provides us with important clues about how planet formation mechanisms drive the diversity of exoplanetary systems observed to date. In the first part of my thesis, I discuss how I use fluorescent emission observations of molecular hydrogen (H2) in the far-ultraviolet (far-UV) with the Hubble Space Telescope to study the warm molecular regions (a < 10 AU) of planet-forming disks. I have created analytic disk models that produce synthetic H2 line profiles and statistically compare each disk realization with the data. I how the modeled radial distributions of H 2 help provide important constraints on the radiation properties of gas left in the inner disk of protoplanetary disks as they evolve. Additionally, I analyzed the absorption component of these fluorescence features, embedded within the hydrogen Lyman-alpha emission line produced by the accretion of material onto the host protostar. I present column density and temperature estimates for the H2 populations in each disk sightline, and discuss the behavior and possible spatial origins of these hot molecules. As part of my thesis, I address some observational requirements needed to gain further insights into the behavior of the warm, gaseous protoplanetary disk, focusing specifically on a spectrograph concept for the next-generation LUVOIR Surveyor. I discuss a testbed instrument, the Colorado High-resolution Echelle Stellar Spectrograph (CHESS), built as a demonstration of one component of the LUVOIR spectrograph and new technological improvements to UV optical components for the next generation of near- to far-UV astrophysical observatories. CHESS is a far-UV sounding rocket experiment designed to probe the warm and cool atoms and molecules near sites of recent star formation in the local interstellar medium. I present the science goals, design, research and development components, and calibration of the CHESS instrument. I provide results on observations taken during both launches of CHESS, with detailed analysis of the epsilon Per sightline, as inferred from the flight data. I conclude by providing future works and simple estimates of the performance of an instrument like CHESS on LUVOIR to study planet-forming environments.

New UV-source catalogs, UV spectral database, UV variables and science tools from the GALEX surveys

NASA Astrophysics Data System (ADS)

Bianchi, Luciana; de la Vega, Alexander; Shiao, Bernard; Bohlin, Ralph

2018-03-01

We present a new, expanded and improved catalog of Ultraviolet (UV) sources from the GALEX All-Sky Imaging survey: GUVcat_AIS (Bianchi et al. in Astrophys. J. Suppl. Ser. 230:24, 2017). The catalog includes 83 million unique sources (duplicate measurements and rim artifacts are removed) measured in far-UV and near-UV. With respect to previous versions (Bianchi et al. in Mon. Not. R. Astron. Soc. 411:2770 2011a, Adv. Space Res. 53:900-991, 2014), GUVcat_AIS covers a slightly larger area, 24,790 square degrees, and includes critical corrections and improvements, as well as new tags, in particular to identify sources in the footprint of extended objects, where pipeline source detection may fail and custom-photometry may be necessary. The UV unique-source catalog facilitates studies of density of sources, and matching of the UV samples with databases at other wavelengths. We also present first results from two ongoing projects, addressing respectively UV variability searches on time scales from seconds to years by mining the GALEX photon archive, and the construction of a database of ˜120,000 GALEX UV spectra (range ˜1300-3000 Å), including quality and calibration assessment and classification of the grism, hence serendipitous, spectral sources.

LED and Semiconductor Photo-effects on Living Things

NASA Astrophysics Data System (ADS)

Fujiyasu, Hiroshi; Ishigaki, Takemitsu; Fujiyasu, Kentarou; Ujihara, Shirou; Watanabe, Naoharu; Sunayama, Shunji; Ikoma, Shuuji

We have studied LED irradiation effects on plants and animals in the visible to UV region of light from GaN LEDs. The results are as follows. Blue light considers to be effective for pearl cultivation or for attraction of small fishes living in near the surface of sea such as Pompano or Sardine, white light radiation is effective for cultivation of botanical plankton for shells. Other experiments of UV light irradiation attracting effect on baby sea turtle and the germination UV effect of mushroom, green light weight enhance effect on baby pigs, light vernalization effect of vegitable and Ge far infrared therapic effect on human body are also given.

Images in the rocket ultraviolet - The stellar population in the central bulge of M31

NASA Technical Reports Server (NTRS)

Bohlin, R. C.; Cornett, R. H.; Hill, J. K.; Hill, R. S.; Oconnell, R. W.; Stecher, T. P.

1985-01-01

Imagery of the bulge of M31 obtained with a rocket-borne telescope in two broad bands centered at 1460 A and 2380 A is discussed. The UV spatial profiles over a region about 200 arcsec wide are identical with those at visible wavelengths. The absence of detectable point sources indicates that main-sequence stars hotter than B0 V are not present in the bulge. It is suggested that the far-UV flux in old stellar populations originates in post-AGB stars. The UV flux from such stars is extremely sensitive to age and the physics of their previous mass loss.

Gas in Protoplanetary and Debris Disks: Insights from UV Spectroscopy

NASA Technical Reports Server (NTRS)

Roberge, Aki

2008-01-01

Over the last two decades, observations of protoplanetary and debris disks have played an important role in the new field of extrasolar planetary studies. Many are familiar with the extensive work on the cold circumstellar dust present in these disks done using infrared and sub-millimeter photometry and spectroscopy. However. UV spectroscopy has made some unique contributions by probing the elusive but vital gas component in protoplanetary and debris disks. In this talk, I will outline our picture of the evolution of protoplanetary disks and discuss the importance of the gas component. New insights obtained from UV spectroscopy will be highlighted, as well as some new puzzles. Finally, I will touch on upcoming studies of gas in protoplanetary and debris disks, some at UV wavelengths, some at far-IR and sub-mm wavelengths.

Ultraviolet safety assessments of insect light traps.

PubMed

Sliney, David H; Gilbert, David W; Lyon, Terry

2016-01-01

Near-ultraviolet (UV-A: 315-400 nm), "black-light," electric lamps were invented in 1935 and ultraviolet insect light traps (ILTs) were introduced for use in agriculture around that time. Today ILTs are used indoors in several industries and in food-service as well as in outdoor settings. With recent interest in photobiological lamp safety, safety standards are being developed to test for potentially hazardous ultraviolet emissions. A variety of UV "Black-light" ILTs were measured at a range of distances to assess potential exposures. Realistic time-weighted human exposures are shown to be well below current guidelines for human exposure to ultraviolet radiation. These UV-A exposures would be far less than the typical UV-A exposure in the outdoor environment. Proposals are made for realistic ultraviolet safety standards for ILT products.

Prochlorococcus and Synechococcus have Evolved Different Adaptive Mechanisms to Cope with Light and UV Stress

PubMed Central

Mella-Flores, Daniella; Six, Christophe; Ratin, Morgane; Partensky, Frédéric; Boutte, Christophe; Le Corguillé, Gildas; Marie, Dominique; Blot, Nicolas; Gourvil, Priscillia; Kolowrat, Christian; Garczarek, Laurence

2012-01-01

Prochlorococcus and Synechococcus, which numerically dominate vast oceanic areas, are the two most abundant oxygenic phototrophs on Earth. Although they require solar energy for photosynthesis, excess light and associated high UV radiations can induce high levels of oxidative stress that may have deleterious effects on their growth and productivity. Here, we compared the photophysiologies of the model strains Prochlorococcus marinus PCC 9511 and Synechococcus sp. WH7803 grown under a bell-shaped light/dark cycle of high visible light supplemented or not with UV. Prochlorococcus exhibited a higher sensitivity to photoinactivation than Synechococcus under both conditions, as shown by a larger drop of photosystem II (PSII) quantum yield at noon and different diel patterns of the D1 protein pool. In the presence of UV, the PSII repair rate was significantly depressed at noon in Prochlorococcus compared to Synechococcus. Additionally, Prochlorococcus was more sensitive than Synechococcus to oxidative stress, as shown by the different degrees of PSII photoinactivation after addition of hydrogen peroxide. A transcriptional analysis also revealed dramatic discrepancies between the two organisms in the diel expression patterns of several genes involved notably in the biosynthesis and/or repair of photosystems, light-harvesting complexes, CO2 fixation as well as protection mechanisms against light, UV, and oxidative stress, which likely translate profound differences in their light-controlled regulation. Altogether our results suggest that while Synechococcus has developed efficient ways to cope with light and UV stress, Prochlorococcus cells seemingly survive stressful hours of the day by launching a minimal set of protection mechanisms and by temporarily bringing down several key metabolic processes. This study provides unprecedented insights into understanding the distinct depth distributions and dynamics of these two picocyanobacteria in the field. PMID:23024637

Prochlorococcus and Synechococcus have Evolved Different Adaptive Mechanisms to Cope with Light and UV Stress.

PubMed

Mella-Flores, Daniella; Six, Christophe; Ratin, Morgane; Partensky, Frédéric; Boutte, Christophe; Le Corguillé, Gildas; Marie, Dominique; Blot, Nicolas; Gourvil, Priscillia; Kolowrat, Christian; Garczarek, Laurence

2012-01-01

Prochlorococcus and Synechococcus, which numerically dominate vast oceanic areas, are the two most abundant oxygenic phototrophs on Earth. Although they require solar energy for photosynthesis, excess light and associated high UV radiations can induce high levels of oxidative stress that may have deleterious effects on their growth and productivity. Here, we compared the photophysiologies of the model strains Prochlorococcus marinus PCC 9511 and Synechococcus sp. WH7803 grown under a bell-shaped light/dark cycle of high visible light supplemented or not with UV. Prochlorococcus exhibited a higher sensitivity to photoinactivation than Synechococcus under both conditions, as shown by a larger drop of photosystem II (PSII) quantum yield at noon and different diel patterns of the D1 protein pool. In the presence of UV, the PSII repair rate was significantly depressed at noon in Prochlorococcus compared to Synechococcus. Additionally, Prochlorococcus was more sensitive than Synechococcus to oxidative stress, as shown by the different degrees of PSII photoinactivation after addition of hydrogen peroxide. A transcriptional analysis also revealed dramatic discrepancies between the two organisms in the diel expression patterns of several genes involved notably in the biosynthesis and/or repair of photosystems, light-harvesting complexes, CO(2) fixation as well as protection mechanisms against light, UV, and oxidative stress, which likely translate profound differences in their light-controlled regulation. Altogether our results suggest that while Synechococcus has developed efficient ways to cope with light and UV stress, Prochlorococcus cells seemingly survive stressful hours of the day by launching a minimal set of protection mechanisms and by temporarily bringing down several key metabolic processes. This study provides unprecedented insights into understanding the distinct depth distributions and dynamics of these two picocyanobacteria in the field.

Solar-Iss a New Solar Reference Spectrum Covering the Far UV to the Infrared (165 to 3088 Nm) Based on Reanalyzed Solar/solspec Cycle 24 Observations

NASA Astrophysics Data System (ADS)

Damé, L.; Meftah, M.; Irbah, A.; Hauchecorne, A.; Bekki, S.; Bolsée, D.; Pereira, N.; Sluse, D.; Cessateur, G.

2017-12-01

Since April 5, 2008 and until February 15, 2017, the SOLSPEC (SOLar SPECtrometer) spectro-radiometer of the SOLAR facility on the International Space Station performed accurate measurements of Solar Spectral Irradiance (SSI) from the far ultraviolet to the infrared (165 nm to 3088 nm). These measurements, unique by their large spectral coverage and long time range, are of primary importance for a better understanding of solar physics and of the impact of solar variability on climate (via Earth's atmospheric photochemistry), noticeably through the "top-down" mechanism amplifying ultraviolet (UV) solar forcing effects on the climate (UV affects stratospheric dynamics and temperatures, altering interplanetary waves and weather patterns both poleward and downward to the lower stratosphere and troposphere regions). SOLAR/SOLSPEC, with almost 9 years of observations covering the essential of the unusual solar cycle 24 from minimum in 2008 to maximum, allowed to establish new reference solar spectra from UV to IR (165 to 3088 nm) at minimum (beginning of mission) and maximum of activity. The complete reanalysis was possible thanks to revised engineering corrections, improved calibrations and advanced procedures to account for thermal, aging and pointing corrections. The high quality and sensitivity of SOLSPEC data allow to follow temporal variability in UV but also in visible along the cycle. Uncertainties on these measurements are evaluated and results, absolute reference spectra and variability, are compared with other measurements (WHI, ATLAS-3, SCIAMACHY, SORCE/SOLSTICE, SORCE/SIM) and models (SATIRE-S, NRLSSI, NESSY)

Scattered light in the IUE spectra of Epsilon Aurigae

NASA Technical Reports Server (NTRS)

Aitner, B.; Chapman, R. D.; Kondo, Y.; Stencel, R. E.

1985-01-01

As a result of this work it was found that light scattered from the longer wavelengths constitutes a small but non-negligible, wavelength and time dependent fraction of the measured flux in the far UV. The reality of the UV excess has not been unambigiously ruled out. However, it is noted that there are still uncertainties in the assumed scattering profile. New measurements of the scattering properties of the cross disperser grating are planned in order to verify the results of Mount and Fastie and extend the wavelength coverage into the far wings of the profile. The results of these measurements will no doubt reduce some of these uncertainties. For the present, it is felt that the BCH approach is a significant improvement over the methods heretofore available for the treatment of scattered light in IUE spectra.

UVIT view of ram-pressure stripping in action: Star formation in the stripped gas of the GASP jellyfish galaxy JO201 in Abell 85

NASA Astrophysics Data System (ADS)

George, K.; Poggianti, B. M.; Gullieuszik, M.; Fasano, G.; Bellhouse, C.; Postma, J.; Moretti, A.; Jaffé, Y.; Vulcani, B.; Bettoni, D.; Fritz, J.; Côté, P.; Ghosh, S. K.; Hutchings, J. B.; Mohan, R.; Sreekumar, P.; Stalin, C. S.; Subramaniam, A.; Tandon, S. N.

2018-06-01

Jellyfish are cluster galaxies that experience strong ram-pressure effects that strip their gas. Their Hα images reveal ionized gas tails up to 100 kpc, which could be hosting ongoing star formation. Here we report the ultraviolet (UV) imaging observation of the jellyfish galaxy JO201 obtained at a spatial resolution ˜ 1.3 kpc. The intense burst of star formation happening in the tentacles is the focus of the present study. JO201 is the "UV-brightest cluster galaxy" in Abell 85 (z ˜ 0.056) with knots and streams of star formation in the ultraviolet. We identify star forming knots both in the stripped gas and in the galaxy disk and compare the UV features with the ones traced by Hα emission. Overall, the two emissions remarkably correlate, both in the main body and along the tentacles. Similarly, also the star formation rates of individual knots derived from the extinction-corrected FUV emission agree with those derived from the Hα emission and range from ˜ 0.01 -to- 2.07 M⊙ yr-1. The integrated star formation rate from FUV flux is ˜ 15 M⊙ yr-1. The unprecedented deep UV imaging study of the jellyfish galaxy JO201 shows clear signs of extraplanar star-formation activity due to a recent/ongoing gas stripping event.

Measurements of Lyman-Alpha Escape From HST Far-UV Spectral SNAP Survey of 33 Starforming Galaxies: Initial Results

NASA Astrophysics Data System (ADS)

Redwine, Keith

2018-01-01

This thesis will describe and analyze far-UV spectra from nearby starforming galaxies to investigate how line features like the hydrogen Lyman-alpha (Lyα) line at 1216 Å are related to the local properties of the host galaxy. It has been suggested that Lyα can be used as a proxy for the escape of Lyman continuum (LyC) radiation, the escape of of which from bright regions of galaxies is of particular interest. Most notably, the reionization epoch of neutral atomic hydrogen in the universe over a redshift range from z∼6 to z∼12, was highly dependent on the flux of ionizing LyC photons in the interstellar and intergalactic media. Expanding our understanding of the dynamics of the Lyα escape fraction (fLyα) from the local environment of its emission could be key to determining a total LyC escape fraction (fLyC) across all morphologies of galaxies. The wide range of Lyα emitters and absorbors (occasionally both) of this Cycle 22 SNAP survey observed by the Cosmic Origins Spectrograph (COS) onboard Hubble Space Telescope (HST) provides a unique look at far-UV spectra in candidate LyC emitters. Lyα profiles are easily observable in short exposures, and line features discernable in the low-resolution G140L mode can inform and guide future observations by COS or other FUV spectroscopy.

Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities.

PubMed

Gilbert, Jack A; Field, Dawn; Huang, Ying; Edwards, Rob; Li, Weizhong; Gilna, Paul; Joint, Ian

2008-08-22

Sequencing the expressed genetic information of an ecosystem (metatranscriptome) can provide information about the response of organisms to varying environmental conditions. Until recently, metatranscriptomics has been limited to microarray technology and random cloning methodologies. The application of high-throughput sequencing technology is now enabling access to both known and previously unknown transcripts in natural communities. We present a study of a complex marine metatranscriptome obtained from random whole-community mRNA using the GS-FLX Pyrosequencing technology. Eight samples, four DNA and four mRNA, were processed from two time points in a controlled coastal ocean mesocosm study (Bergen, Norway) involving an induced phytoplankton bloom producing a total of 323,161,989 base pairs. Our study confirms the finding of the first published metatranscriptomic studies of marine and soil environments that metatranscriptomics targets highly expressed sequences which are frequently novel. Our alternative methodology increases the range of experimental options available for conducting such studies and is characterized by an exceptional enrichment of mRNA (99.92%) versus ribosomal RNA. Analysis of corresponding metagenomes confirms much higher levels of assembly in the metatranscriptomic samples and a far higher yield of large gene families with >100 members, approximately 91% of which were novel. This study provides further evidence that metatranscriptomic studies of natural microbial communities are not only feasible, but when paired with metagenomic data sets, offer an unprecedented opportunity to explore both structure and function of microbial communities--if we can overcome the challenges of elucidating the functions of so many never-seen-before gene families.

Stochastic analysis of 1D and 2D surface topography of x-ray mirrors

NASA Astrophysics Data System (ADS)

Tyurina, Anastasia Y.; Tyurin, Yury N.; Yashchuk, Valeriy V.

2017-08-01

The design and evaluation of the expected performance of new optical systems requires sophisticated and reliable information about the surface topography for planned optical elements before they are fabricated. The problem is especially complex in the case of x-ray optics, particularly for the X-ray Surveyor under development and other missions. Modern x-ray source facilities are reliant upon the availability of optics with unprecedented quality (surface slope accuracy < 0.1μrad). The high angular resolution and throughput of future x-ray space observatories requires hundreds of square meters of high quality optics. The uniqueness of the optics and limited number of proficient vendors makes the fabrication extremely time consuming and expensive, mostly due to the limitations in accuracy and measurement rate of metrology used in fabrication. We discuss improvements in metrology efficiency via comprehensive statistical analysis of a compact volume of metrology data. The data is considered stochastic and a new statistical model called Invertible Time Invariant Linear Filter (InTILF) is developed now for 2D surface profiles to provide compact description of the 2D data additionally to 1D data treated so far. The model captures faint patterns in the data and serves as a quality metric and feedback to polishing processes, avoiding high resolution metrology measurements over the entire optical surface. The modeling, implemented in our Beatmark software, allows simulating metrology data for optics made by the same vendor and technology. The forecast data is vital for reliable specification for optical fabrication, to be exactly adequate for the required system performance.

Self-powered highly enhanced broad wavelength (UV to visible) photoresponse of ZnO@ZnO1-xSx@ZnS core-shell heterostructures.

PubMed

Sarkar, Sanjit; Das Mahapatra, Ayon; Basak, Durga

2018-08-01

In the present scenario of energy crisis, it is inevitable to focus on the low powered or self-powered devices. Multi-spectral photoresponse is an additional advantage to the above feature. We have developed an efficient self-powered photodetector with broad wavelength detection range based on heterostructures of two wide band-gap materials ZnO and ZnS. More than two orders higher responsivity and 'ON/OFF' ratio has been observed in case of heterostructure sample as compared to pristine ZnO. On the basis of the controlled experimental results, it has been established that the interfacial surface engineering, can be useful to improve the visible response and a significant photovoltaic performance under visible light illumination can be achieved. Unlike the other recent reports on self-powered UV-visible photodetector, we have achieved two order higher visible response without compromising the UV photoresponse. Unprecedented broad wavelength photodetection in self-powered mode in the present study highlights the uniqueness and advantage of an interface in a core-shell heterostructure for photodetection applications. Copyright © 2018 Elsevier Inc. All rights reserved.

Far-infrared Beamline at the Canadian Light Source

NASA Astrophysics Data System (ADS)

Zhao, Jianbao; Billinghurst, Brant

2017-06-01

Far-infrared is a particularly useful technique for studies on lattice modes as they generally appear in the Far-infrared region. Far-infrared is also an important tool for gathering information on the electrical transport properties of metallic materials and the band gap of semiconductors. This poster will describe the horizontal microscope that has recently been built in the Far-infrared beamline at the Canadian Light Source Inc. (CLS). This microscope is specially designed for high-pressure Far-infrared absorbance and reflectance spectroscopic studies. The numerical aperture (0.5) and the long working distance (82.1 mm) in the microscope are good fits for Diamond Anvil Cell (DAC). The spectra are recorded using liquid helium cooled Si bolometer or Ge:Cu detector. The pressure in the DAC can be determined by using the fluorescence spectrometer available onsite. The Far-infrared beamline at CLS is a state-of-the-art synchrotron facility, offering significantly more brightness than conventional sources. Because of the high brightness of the synchrotron radiation, we can obtain the Far-infrared reflectance/absorbance spectra on the small samples with more throughput than with a conventional source. The Far-infrared beamline is open to users through peer review.

Multidecadal global cooling and unprecedented ozone loss following a regional nuclear conflict

NASA Astrophysics Data System (ADS)

Mills, Michael J.; Toon, Owen B.; Lee-Taylor, Julia; Robock, Alan

2014-04-01

We present the first study of the global impacts of a regional nuclear war with an Earth system model including atmospheric chemistry, ocean dynamics, and interactive sea ice and land components. A limited, regional nuclear war between India and Pakistan in which each side detonates 50 15 kt weapons could produce about 5 Tg of black carbon (BC). This would self-loft to the stratosphere, where it would spread globally, producing a sudden drop in surface temperatures and intense heating of the stratosphere. Using the Community Earth System Model with the Whole Atmosphere Community Climate Model, we calculate an e-folding time of 8.7 years for stratospheric BC compared to 4-6.5 years for previous studies. Our calculations show that global ozone losses of 20%-50% over populated areas, levels unprecedented in human history, would accompany the coldest average surface temperatures in the last 1000 years. We calculate summer enhancements in UV indices of 30%-80% over midlatitudes, suggesting widespread damage to human health, agriculture, and terrestrial and aquatic ecosystems. Killing frosts would reduce growing seasons by 10-40 days per year for 5 years. Surface temperatures would be reduced for more than 25 years due to thermal inertia and albedo effects in the ocean and expanded sea ice. The combined cooling and enhanced UV would put significant pressures on global food supplies and could trigger a global nuclear famine. Knowledge of the impacts of 100 small nuclear weapons should motivate the elimination of more than 17,000 nuclear weapons that exist today.

Probing the conditions within Photo-dissociation Regions with high resolution near-infrared spectroscopy of UV-excited molecular hydrogen

NASA Astrophysics Data System (ADS)

Kaplan, Kyle; Dinerstein, Harriet L.; Jaffe, Daniel Thomas

2017-01-01

UV radiation regulates the energetics, ionization, and chemistry in much of the ISM. Regions between hot ionized and cool molecular gas where non-ionizing far-UV radiation dominates the state of the gas are called Photo-Dissociation or Photon-Dominated Regions (PDRs). PDRs are found in regions of high-mass star formation, planetary nebulae, and other environments that contain strong far-UV radiation fields. Hydrogen molecules (H2) are pumped by far-UV photons into excited rotational-vibrational levels of the ground electronic state, which give rise to a rich array of transitions in the near to mid-infrared. These transitions make an excellent probe of the physical conditions within a PDR. I will present near-IR spectra taken with the Immersion GRating Infrared Spectrometer (IGRINS; Park et al. 2014, Proc. SPIE, 9147), a novel, sensitive spectrometer with high spectral resolving power (R~45000) and instantaneous broad wavelength coverage (1.45-2.45 μm). Using IGRINS, I obtained deep spectra and measured up to 100 H2 rotational-vibrational transitions in the well-studied Orion Bar PDR, four other star formation complexes, and over a dozen planetary nebulae. Measurements of many lines from a wide range of vibrational states (v=1 to 13), rotational states (J=1 to 13), and excitation energies provides leverage for constraining the overall level populations and discerning the state of and physical processes within the gas. This combination of high spectral and spatial resolution enables us to distinguish previously unresolved spatio-kinematical components with distinct intrinsic spectra and excitation mechanisms (e.g. shocks vs. radiative excitation) within some individual planetary nebulae. I use the plasma simulation code Cloudy (Ferland et al. 2013, ApJ, 757, 79) as a tool for interpreting the observed H2 line ratios. Some sources are well fit by models with a single temperature and density, consistent with emission from a narrow region of the overall PDR structure. Populations of certain levels are more sensitive than others to specific physical parameters such as gas kinetic temperature or density.I acknowledge support from the following grants: NSF 1229522, NSF 0708245, and JPL RSA 1427884.

Variations in Canonical Star-Forming Laws at Low Metallicity

NASA Astrophysics Data System (ADS)

Monkiewicz, Jacqueline; Bowman, Judd D.; Scowen, Paul

2018-01-01

Empirically-determined star formation relations link observed galaxy luminosities to extrapolated star formation rates at almost every observable wavelength range. These laws are a cornerstone of extragalactic astronomy, and will be critically important for interpreting upcoming observations of early high-redshift protogalaxies with JWST and WFIRST. There are indications at a variety of wavelengths that these canonical relations may become unreliable at the lowest metallicities observed. This potentially complicates interpretation of the earliest protogalaxies, which are expected to be pristine and largely unenriched by stellar nucleosynthesis. Using a sample of 15 local dwarf galaxies with 12+[O/H] < 8.2, I focus on two of these relations: the far-infrared/radio relation and the H-alpha/ultraviolet relation. The sample is chosen to have pre-existing far-IR and UV observations, and to span the full spread of the galaxy mass-metallicity relationship at low luminosity, so that luminosity and metallicity may be examined separately. Radio continuum observations of low metallicity dwarf galaxies 1 Zw 18 and SBS 0335-052E suggest that the far-IR/radio relation probably deviates at low metallicities, but the low luminosity end of the relation is not well sampled. The upgraded Jansky Very Large Array has the sensitivity to fill in this gap. I have obtained 45 hours of L- and C-band continuum data of my dwarf galaxy sample. I present radio continuum imaging of an initial sub-sample of Local Group dwarfs, some of which have never before been detected in radio continuum. The H-alpha/UV relationship is likewise known to become unreliable for dwarf galaxies, though this has been attributed to dwarf galaxy "bursty-ness" rather than metallicity effects. I have conducted a parallel survey of emission line imaging to study the underlying astrophysics of the H-alpha/UV relation. Using Balmer decrement imaging, I map out the pixel-to-pixel dust distribution and geometry within the nearest galaxies in my sample. I compare this to GALEX UV imaging. I discuss implications for UV escape fraction, and present initial results of the canonical star-forming relations at low galaxy luminosity and metallicity. THIS IS A POSTER AND WILL BE LOCATED IN THE AAS BOOTH.

Natural Product Libraries to Accelerate the High Throughput Discovery of Therapeutic Leads±

PubMed Central

Johnson, Tyler A.; Sohn, Johann; Inman, Wayne D.; Estee, Samarkand A.; Loveridge, Steven T.; Vervoort, Helene C.; Tenney, Karen; Liu, Junke; Ang, Kenny Kean-Hooi; Ratnam, Joseline; Bray, Walter M.; Gassner, Nadine C.; Shen, Young Y.; Lokey, R. Scott; McKerrow, James H.; Boundy-Mills, Kyria; Nukanto, Arif; Kanti, Atit; Julistiono, Heddy; Kardono, Leonardus B. S.; Bjeldanes, Leonard F.; Crews, Phillip

2011-01-01

A high throughput (HT) paradigm generating LC-MS-UV-ELSD based natural product libraries to discover compounds with new bioactivities and or molecular structures is presented. To validate this methodology an extract of the Indo Pacific marine sponge Cacospongia mycofijiensis was evaluated using assays involving cytoskeletal profiling, tumor cell lines, and parasites. Twelve known compounds were identified including the latrunculins (1–4, 10), fijianolides (5, 8–9), mycothiazole (11), the aignopsanes (6–7) and sacrotride A (13). Compounds 1–4, 5, 8–11 exhibited bioactivity not previously reported against the parasite T. brucei, while 11 showed selectivity for lymphoma (U937) tumor cell lines. Four new compounds were also discovered including: aignopsanoic acid B (13), apo latrunculin T (14), 20-methoxy-fijianolide A (15) and aignopsane ketal (16). Compounds 13 and 16 represent important derivatives of the aignopsane class, 14 exhibited inhibition of T. brucei without disrupting microfilament assembly and 15 demonstrated modest microtubule stabilizing effects. The use of removable well plate libraries to avoid false positives from extracts enriched with only 1–2 major metabolites is also discussed. Overall, these results highlight the advantages of applying modern methods in natural products-based research to accelerate the HT discovery of therapeutic leads and or new molecular structures using LC-MS-UV-ELSD based libraries. PMID:22129061

X-ray free-electron laser oscillator with nuclear-resonant cavity stabilization and quantum-optical applications

DOE PAGES

Adams, Bernhard W.; Kim, Kwang -Je

2016-08-09

Here, x-ray free-electron-laser oscillators with nuclear-resonant cavity stabilization (NRS-XFELO) hold the promise for providing x-rays with unprecedented coherence properties that will enable interesting quantum-optical and metrological applications. Among these are atom optics with x-ray-based optical elements providing high momentum transfer, or a frequency standard far surpassing the best state-of the-art atomic clocks.

The U.S. Air Force Transformation Flight Plan

DTIC Science & Technology

2003-11-01

at Buckley Air Force Base, Colorado. Reserve Associate and Active Associate units have proven that this concept works and benef its the Active and...munitions manufactured from nano-particles, whose virtually all-surface structure yields unprecedented “burn-rates” (extreme explosiveness), promise far...systems for a common operating system, and a suite of remotely operated sensors, weapons, and robotics . Also included are a group of non-lethal weapon

What can we learn from the auroral footprints of the Jovian moons? (Invited)

NASA Astrophysics Data System (ADS)

Bonfond, B.

2010-12-01

The signature of electromagnetic interaction between the moons Io, Europa and Ganymede and the Jovian magnetosphere can be observed on Jupiter’s polar ionosphere in the form of auroral footprints. The observation campaigns carried out during the past few years by the Hubble Space Telescope in the Far UV domain provided not only a high spatial and temporal resolution but also an unprecedented System III longitude coverage. Consequently, these recent observations of the morphology and the dynamics of the footprints proved to be very powerful tools to probe these interactions. For example, the locations of the satellite footprints have been used as a valuable constraint for building Jovian magnetic field models. Moreover, analysis of the multiplicity of the Io footprint spots as well as their relative motion lead to new conclusions on the electron acceleration processes. The altitude of the Io footprint has also been used to infer the typical energy of the impinging electrons. Finally, the study of the three-dimensional shape and of the brightness of the different sub-structures of the footprints provides important clues on the processes at play between Io and the Jovian ionosphere. On the theoretical side, considerable efforts have also been recently carried out in order to model the propagation of the Alfvén waves generated at Io and the subsequent acceleration of auroral electrons. Coupled with HST images, radio decametric measurements and in situ data from the Galileo spacecraft, these advances provide a brand new understanding of the satellite footprints.

Big Data Bioinformatics

PubMed Central

GREENE, CASEY S.; TAN, JIE; UNG, MATTHEW; MOORE, JASON H.; CHENG, CHAO

2017-01-01

Recent technological advances allow for high throughput profiling of biological systems in a cost-efficient manner. The low cost of data generation is leading us to the “big data” era. The availability of big data provides unprecedented opportunities but also raises new challenges for data mining and analysis. In this review, we introduce key concepts in the analysis of big data, including both “machine learning” algorithms as well as “unsupervised” and “supervised” examples of each. We note packages for the R programming language that are available to perform machine learning analyses. In addition to programming based solutions, we review webservers that allow users with limited or no programming background to perform these analyses on large data compendia. PMID:27908398

Big Data Bioinformatics

PubMed Central

GREENE, CASEY S.; TAN, JIE; UNG, MATTHEW; MOORE, JASON H.; CHENG, CHAO

2017-01-01

Recent technological advances allow for high throughput profiling of biological systems in a cost-efficient manner. The low cost of data generation is leading us to the “big data” era. The availability of big data provides unprecedented opportunities but also raises new challenges for data mining and analysis. In this review, we introduce key concepts in the analysis of big data, including both “machine learning” algorithms as well as “unsupervised” and “supervised” examples of each. We note packages for the R programming language that are available to perform machine learning analyses. In addition to programming based solutions, we review webservers that allow users with limited or no programming background to perform these analyses on large data compendia. PMID:24799088

Evolutionary Patterns and Processes: Lessons from Ancient DNA.

PubMed

Leonardi, Michela; Librado, Pablo; Der Sarkissian, Clio; Schubert, Mikkel; Alfarhan, Ahmed H; Alquraishi, Saleh A; Al-Rasheid, Khaled A S; Gamba, Cristina; Willerslev, Eske; Orlando, Ludovic

2017-01-01

Ever since its emergence in 1984, the field of ancient DNA has struggled to overcome the challenges related to the decay of DNA molecules in the fossil record. With the recent development of high-throughput DNA sequencing technologies and molecular techniques tailored to ultra-damaged templates, it has now come of age, merging together approaches in phylogenomics, population genomics, epigenomics, and metagenomics. Leveraging on complete temporal sample series, ancient DNA provides direct access to the most important dimension in evolution—time, allowing a wealth of fundamental evolutionary processes to be addressed at unprecedented resolution. This review taps into the most recent findings in ancient DNA research to present analyses of ancient genomic and metagenomic data.

Evolutionary Patterns and Processes: Lessons from Ancient DNA

PubMed Central

Leonardi, Michela; Librado, Pablo; Der Sarkissian, Clio; Schubert, Mikkel; Alfarhan, Ahmed H.; Alquraishi, Saleh A.; Al-Rasheid, Khaled A. S.; Gamba, Cristina; Willerslev, Eske

2017-01-01

Abstract Ever since its emergence in 1984, the field of ancient DNA has struggled to overcome the challenges related to the decay of DNA molecules in the fossil record. With the recent development of high-throughput DNA sequencing technologies and molecular techniques tailored to ultra-damaged templates, it has now come of age, merging together approaches in phylogenomics, population genomics, epigenomics, and metagenomics. Leveraging on complete temporal sample series, ancient DNA provides direct access to the most important dimension in evolution—time, allowing a wealth of fundamental evolutionary processes to be addressed at unprecedented resolution. This review taps into the most recent findings in ancient DNA research to present analyses of ancient genomic and metagenomic data. PMID:28173586

Big data bioinformatics.

PubMed

Greene, Casey S; Tan, Jie; Ung, Matthew; Moore, Jason H; Cheng, Chao

2014-12-01

Recent technological advances allow for high throughput profiling of biological systems in a cost-efficient manner. The low cost of data generation is leading us to the "big data" era. The availability of big data provides unprecedented opportunities but also raises new challenges for data mining and analysis. In this review, we introduce key concepts in the analysis of big data, including both "machine learning" algorithms as well as "unsupervised" and "supervised" examples of each. We note packages for the R programming language that are available to perform machine learning analyses. In addition to programming based solutions, we review webservers that allow users with limited or no programming background to perform these analyses on large data compendia. © 2014 Wiley Periodicals, Inc.

Advanced Environmentally Resistant Lithium Fluoride Mirror Coatings for the Next Generation of Broadband Space Observatories

NASA Technical Reports Server (NTRS)

Fleming, Brian; Quijada, Manuel A.; Hennessy, John; Egan, Arika; Del Hoyo, Javier G.

2017-01-01

Recent advances in the physical vapor deposition (PVD) of protective fluoride films have raised the far-ultraviolet (FUV: 912-1600 A) reflectivity of aluminum-based mirrors closer to the theoretical limit. The greatest gains, at more than 20%, have come for lithium fluoride-protected aluminum, which has the shortest wavelength cutoff of any conventional overcoat. Despite the success of the NASA FUSE mission, the use of lithium fluoride (LiF)-based optics is rare, as LiF is hygroscopic and requires handling procedures that can drive risk. With NASA now studying two large mission concepts for astronomy, Large UV-Optical-IR Surveyor (LUVOIR) and the Habitable Exoplanet Imaging Mission (HabEx), which mandate throughput down to 1000 , the development of LiF-based coatings becomes crucial. This paper discusses steps that are being taken to qualify these new enhanced LiF-protected aluminum (eLiF) mirror coatings for flight. In addition to quantifying the hygroscopic degradation, we have developed a new method of protecting eLiF with an ultrathin (10-20 A) capping layer of a nonhygroscopic material to increase durability. We report on the performance of eLiF-based optics and assess the steps that need to be taken to qualify such coatings for LUVOIR, HabEx, and other FUV-sensitive space missions.

The variations in the nuclear proteome reveal new transcription factors and mechanisms involved in UV stress response in Pinus radiata.

PubMed

Pascual, Jesús; Alegre, Sara; Nagler, Matthias; Escandón, Mónica; Annacondia, María Luz; Weckwerth, Wolfram; Valledor, Luis; Cañal, María Jesús

2016-06-30

The importance of UV stress and its side-effects over the loss of plant productivity in forest species demands a deeper understanding of how pine trees respond to UV irradiation. Although the response to UV stress has been characterized at system and cellular levels, the dynamics within the nuclear proteome triggered by UV is still unknown despite that they are essential for gene expression and regulation of plant physiology. To fill this gap this work aims to characterize the variations in the nuclear proteome as a response to UV irradiation by using state-of-the-art mass spectrometry-based methods combined with novel bioinformatics workflows. The combination of SEQUEST, de novo sequencing, and novel annotation pipelines allowed cover sensing and transduction pathways, endoplasmic reticulum-related mechanisms and the regulation of chromatin dynamism and gene expression by histones, histone-like NF-Ys, and other transcription factors previously unrelated to this stress source, as well as the role of alternative splicing and other mechanisms involved in RNA translation and protein synthesis. The determination of 33 transcription factors, including NF-YB13, Pp005698_3 (NF-YB) and Pr009668_2 (WD-40), which are correlated to stress responsive mechanisms like an increased accumulation of photoprotective pigments and reduced photosynthesis, pointing them as strong candidate biomarkers for breeding programs aimed to improve UV resistance of pine trees. The description of the nuclear proteome of Pinus radiata combining a classic approach based on the use of SEQUEST and the use of a mass accuracy precursor alignment (MAPA) allowed an unprecedented protein coverage. This workflow provided the methodological basis for characterizing the changes in the nuclear proteome triggered by UV irradiation, allowing the depiction of the nuclear events involved in stress response and adaption. The relevance of some of the discovered proteins will suppose a major advance in stress biology field, also providing a set of transcription factors that can be considered as strong biomarker candidates to select trees more tolerant to UV radiation in forest upgrade programs. Copyright © 2016 Elsevier B.V. All rights reserved.

Reactive low temperature plasma ionization mass spectrometry for the determination of organic UV filters in personal care products.

PubMed

Ding, Xuelu; Gerbig, Stefanie; Spengler, Bernhard; Schulz, Sabine

2018-02-01

Organic UV filters in personal care products (PCPs) have been persistently reported as a potential threat to human health. In order to guarantee consumers ' safety, the dose of these compounds in PCPs needs to be monitored. Here, a methodology based on reactive low temperature plasma ionization (LTP) mass spectrometry (MS) has been developed for the determination of common organic UV filters in PCPs including benzophenone-3, ethylhexyl dimethyl p-aminobenzoic acid, ethylhexyl methoxycinnamate, 4-methylbenzylidene camphor, octocrylene, and ethylhexyl salicylate. The experiments were carried out in transmission geometry where the LTP ion source, samples loaded on a stainless steel mesh, and the MS inlet were aligned coaxially. Four chemicals, ammonia, ammonium formate, aniline, and methylamine were considered as reactive additives allowing reactions with the UV filters through different mechanisms. Methylamine-induced reactive LTP-MS showed the most prominent improvement on the detection of UV filter compounds. Compared to direct LTP-MS, the developed method improved the detection limits of UV filters more than 10 fold. Moreover, the method enabled fast semi-quantitative screening of UV filters in authentic PCPs. Concentrations of active ingredients in eight authentic PCPs as determined with reactive LTP-MS were found comparable to values offered by the cosmetic companies and corresponding HPLC data. The methodology provides high throughput analysis (70s per sample) and sensitive identification of organic UV filters. Lowest detectable concentrations ranged from 0.13µg/g for 4-methylbenzylidene camphor to 7.67µg/g for octocrylene in spiked cream. In addition, it shows the potential to be used as a screening tool for legal authentications of these chemicals in the future due to its semi-quantitative determination of UV filters in PCPs without tedious sample preparation and time-consuming chromatographic separation. Copyright © 2017 Elsevier B.V. All rights reserved.

The WEAVE-LOFAR Survey

NASA Astrophysics Data System (ADS)

Smith, D. J. B.; Best, P. N.; Duncan, K. J.; Hatch, N. A.; Jarvis, M. J.; Röttgering, H. J. A.; Simpson, C. J.; Stott, J. P.; Cochrane, R. K.; Coppin, K. E.; Dannerbauer, H.; Davis, T. A.; Geach, J. E.; Hale, C. L.; Hardcastle, M. J.; Hatfield, P. W.; Houghton, R. C. W.; Maddox, N.; McGee, S. L.; Morabito, L.; Nisbet, D.; Pandey-Pommier, M.; Prandoni, I.; Saxena, A.; Shimwell, T. W.; Tarr, M.; van Bemmel, I.; Verma, A.; White, G. J.; Williams, W. L.

2016-12-01

In these proceedings we highlight the primary scientific goals and design of the WEAVE-LOFAR survey, which will use the new WEAVE spectrograph on the 4.2m William Herschel Telescope to provide the primary source of spectroscopic information for the LOFAR Surveys Key Science Project. Beginning in 2018, WEAVE-LOFAR will generate more than 10^6 R=5000 365-960nm spectra of low-frequency selected radio sources, across three tiers designed to efficiently sample the redshift-luminosity plane, and produce a data set of enormous legacy value. The radio frequency selection, combined with the high multiplex and throughput of the WEAVE spectrograph, make obtaining redshifts in this way very efficient, and we expect that the redshift success rate will approach 100 per cent at z < 1. This unprecedented spectroscopic sample - which will be complemented by an integral field component - will be transformational in key areas, including studying the star formation history of the Universe, the role of accretion and AGN-driven feedback, properties of the epoch of reionisation, cosmology, cluster haloes and relics, as well as the nature of radio galaxies and protoclusters. Each topic will be addressed in unprecedented detail, and with the most reliable source classifications and redshift information in existence.

Optimizing the Energy and Throughput of a Water-Quality Monitoring System.

PubMed

Olatinwo, Segun O; Joubert, Trudi-H

2018-04-13

This work presents a new approach to the maximization of energy and throughput in a wireless sensor network (WSN), with the intention of applying the approach to water-quality monitoring. Water-quality monitoring using WSN technology has become an interesting research area. Energy scarcity is a critical issue that plagues the widespread deployment of WSN systems. Different power supplies, harvesting energy from sustainable sources, have been explored. However, when energy-efficient models are not put in place, energy harvesting based WSN systems may experience an unstable energy supply, resulting in an interruption in communication, and low system throughput. To alleviate these problems, this paper presents the joint maximization of the energy harvested by sensor nodes and their information-transmission rate using a sum-throughput technique. A wireless information and power transfer (WIPT) method is considered by harvesting energy from dedicated radio frequency sources. Due to the doubly near-far condition that confronts WIPT systems, a new WIPT system is proposed to improve the fairness of resource utilization in the network. Numerical simulation results are presented to validate the mathematical formulations for the optimization problem, which maximize the energy harvested and the overall throughput rate. Defining the performance metrics of achievable throughput and fairness in resource sharing, the proposed WIPT system outperforms an existing state-of-the-art WIPT system, with the comparison based on numerical simulations of both systems. The improved energy efficiency of the proposed WIPT system contributes to addressing the problem of energy scarcity.

Optimizing the Energy and Throughput of a Water-Quality Monitoring System

PubMed Central

Olatinwo, Segun O.

2018-01-01

This work presents a new approach to the maximization of energy and throughput in a wireless sensor network (WSN), with the intention of applying the approach to water-quality monitoring. Water-quality monitoring using WSN technology has become an interesting research area. Energy scarcity is a critical issue that plagues the widespread deployment of WSN systems. Different power supplies, harvesting energy from sustainable sources, have been explored. However, when energy-efficient models are not put in place, energy harvesting based WSN systems may experience an unstable energy supply, resulting in an interruption in communication, and low system throughput. To alleviate these problems, this paper presents the joint maximization of the energy harvested by sensor nodes and their information-transmission rate using a sum-throughput technique. A wireless information and power transfer (WIPT) method is considered by harvesting energy from dedicated radio frequency sources. Due to the doubly near–far condition that confronts WIPT systems, a new WIPT system is proposed to improve the fairness of resource utilization in the network. Numerical simulation results are presented to validate the mathematical formulations for the optimization problem, which maximize the energy harvested and the overall throughput rate. Defining the performance metrics of achievable throughput and fairness in resource sharing, the proposed WIPT system outperforms an existing state-of-the-art WIPT system, with the comparison based on numerical simulations of both systems. The improved energy efficiency of the proposed WIPT system contributes to addressing the problem of energy scarcity. PMID:29652866

Ultraviolet safety assessments of insect light traps

PubMed Central

Sliney, David H.; Gilbert, David W.; Lyon, Terry

2016-01-01

ABSTRACT Near-ultraviolet (UV-A: 315–400 nm), “black-light,” electric lamps were invented in 1935 and ultraviolet insect light traps (ILTs) were introduced for use in agriculture around that time. Today ILTs are used indoors in several industries and in food-service as well as in outdoor settings. With recent interest in photobiological lamp safety, safety standards are being developed to test for potentially hazardous ultraviolet emissions. A variety of UV “Black-light” ILTs were measured at a range of distances to assess potential exposures. Realistic time-weighted human exposures are shown to be well below current guidelines for human exposure to ultraviolet radiation. These UV-A exposures would be far less than the typical UV-A exposure in the outdoor environment. Proposals are made for realistic ultraviolet safety standards for ILT products. PMID:27043058

Improved Astronomical Instrumentation for the Far Ultra-Violet

NASA Astrophysics Data System (ADS)

Witt, Emily M.; Fleming, Brian; Egan, Arika; Tyler, Rachel; Wiley, James

2018-06-01

Recent technological advances have opened up new instrument capabilities in the ultraviolet. Of particular interest are advanced deposition processes that have made lithium fluoride (LiF) based mirrors more accessible, achieving greater than 80% broadband reflectivity down into the Lyman UV (100 nm). Traditional MgF2 protected aluminum mirrors cut off at 115 nm, missing crucial tracers of warm gas and molecules. The hygroscopic sensitivity of LiF, which adds mission risk and cost, has also been mitigated with a thin capping layer of a more durable substance, making LiF mirrors accessible without onerous environmental procedures. These advances open up a new paradigm in UV astronomy by enabling multi-reflection systems in the Lyman UV. We present recent progress in the testing of eLiF-based optics, and then discuss the potential scientific avenues this opens up in UV astronomy.

Analysis of UV-absorbing photoprotectant mycosporine-like amino acid (MAA) in the cyanobacterium Arthrospira sp. CU2556.

PubMed

Rastogi, Rajesh P; Incharoensakdi, Aran

2014-07-01

Mycosporine-like amino acids (MAAs) are ecologically important biomolecules with great photoprotective potential. The present study aimed to investigate the biosynthesis of MAAs in the cyanobacterium Arthrospira sp. CU2556. High-performance liquid chromatography (HPLC) with photodiode-array detection studies revealed the presence of a UV-absorbing compound with an absorption maximum at 310 nm. Based on its UV absorption spectrum and ion trap liquid chromatography/mass spectrometry (LC/MS) analysis, the compound was identified as a primary MAA mycosporine-glycine (m/z: 246). To the best of our knowledge this is the first report on the occurrence of MAA mycosporine-glycine (M-Gly) in Arthrospira strains studied so far. In contrast to photosynthetic activity under UV-A radiation, the induction of the biosynthesis of M-Gly was significantly more prominent under UV-B radiation. The content of M-Gly was found to increase with the increase in exposure time under UV-B radiation. The MAA M-Gly was highly stable under UV radiation, heat, strongly acidic and alkaline conditions. It also exhibited good antioxidant activity and photoprotective ability by detoxifying the in vivo reactive oxygen species (ROS) generated by UV radiation. Our results indicate that the studied cyanobacterium may protect itself by synthesizing the UV-absorbing/screening compounds as important defense mechanisms, in their natural brightly-lit habitat with high solar UV-B fluxes.

Far-UV Spectroscopy of the Planet-hosting Star WASP-13: High-energy Irradiance, Distance, Age, Planetary Mass-loss Rate, and Circumstellar Environment

NASA Astrophysics Data System (ADS)

Fossati, L.; France, K.; Koskinen, T.; Juvan, I. G.; Haswell, C. A.; Lendl, M.

2015-12-01

Several transiting hot Jupiters orbit relatively inactive main-sequence stars. For some of those, the {log}{R}{HK}\\prime activity parameter lies below the basal level (-5.1). Two explanations have been proposed so far: (i) the planet affects the stellar dynamo, (ii) the {log}{R}{HK}\\prime measurements are biased by extrinsic absorption, either by the interstellar medium (ISM) or by material local to the system. We present here Hubble Space Telescope/COS far-UV spectra of WASP-13, which hosts an inflated hot Jupiter and has a measured {log}{R}{HK}\\prime value (-5.26), well below the basal level. From the star’s spectral energy distribution we obtain an extinction E(B - V) = 0.045 ± 0.025 mag and a distance d = 232 ± 8 pc. We detect at ≳4σ lines belonging to three different ionization states of carbon (C i, C ii, and C iv) and the Si iv doublet at ˜3σ. Using far-UV spectra of nearby early G-type stars of known age, we derive a C iv/C i flux ratio-age relation, from which we estimate WASP-13's age to be 5.1 ± 2.0 Gyr. We rescale the solar irradiance reference spectrum to match the flux of the C iv 1548 doublet. By integrating the rescaled solar spectrum, we obtain an XUV flux at 1 AU of 5.4 erg s-1 cm-2. We use a detailed model of the planet’s upper atmosphere, deriving a mass-loss rate of 1.5 × 1011 g s-1. Despite the low {log}{R}{HK}\\prime value, the star shows a far-UV spectrum typical of middle-aged solar-type stars, pointing toward the presence of significant extrinsic absorption. The analysis of a high-resolution spectrum of the Ca ii H&K lines indicates that the ISM absorption could be the origin of the low {log}{R}{HK}\\prime value. Nevertheless, the large uncertainty in the Ca ii ISM abundance does not allow us to firmly exclude the presence of circumstellar gas. Based on observations made with the NASA/ESA Hubble Space Telescope, obtained from MAST at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-26555. These observations are associated with program #13859.

Galaxy Morphology From the UV to the FIR: An Intercomparison of Recent Observations From Space With New Radiative Transfer Models

NASA Technical Reports Server (NTRS)

(CIT), Barry Madore

1995-01-01

We will present the latest multiwavelength observations of spiral galaxies made from space and from the ground covering the electromagnetic spectrum from the far ultraviolet (ASTRO-2 UIT observations) through the optical, and out to the far infrared (IRAS). Comparisons with recent theoretical models for the radiative transfer of stellar light through a three-dimensional dusty galaxy will be presented.

High-efficiency UV/optical/NIR detectors for large aperture telescopes and UV explorer missions: development of and field observations with delta-doped arrays

NASA Astrophysics Data System (ADS)

Nikzad, Shouleh; Jewell, April D.; Hoenk, Michael E.; Jones, Todd J.; Hennessy, John; Goodsall, Tim; Carver, Alexander G.; Shapiro, Charles; Cheng, Samuel R.; Hamden, Erika T.; Kyne, Gillian; Martin, D. Christopher; Schiminovich, David; Scowen, Paul; France, Kevin; McCandliss, Stephan; Lupu, Roxana E.

2017-07-01

Exciting concepts are under development for flagship, probe class, explorer class, and suborbital class NASA missions in the ultraviolet/optical spectral range. These missions will depend on high-performance silicon detector arrays being delivered affordably and in high numbers. To that end, we have advanced delta-doping technology to high-throughput and high-yield wafer-scale processing, encompassing a multitude of state-of-the-art silicon-based detector formats and designs. We have embarked on a number of field observations, instrument integrations, and independent evaluations of delta-doped arrays. We present recent data and innovations from JPL's Advanced Detectors and Systems Program, including two-dimensional doping technology, JPL's end-to-end postfabrication processing of high-performance UV/optical/NIR arrays and advanced coatings for detectors. While this paper is primarily intended to provide an overview of past work, developments are identified and discussed throughout. Additionally, we present examples of past, in-progress, and planned observations and deployments of delta-doped arrays.

A Novel High-Throughput 1536-well Notch1 γ-Secretase AlphaLISA Assay

PubMed Central

Chau, De-ming; Shum, David; Radu, Constantin; Bhinder, Bhavneet; Gin, David; Gilchrist, M. Lane; Djaballah, Hakim; Li, Yue-Ming

2013-01-01

The Notch pathway plays a crucial role in cell fate decisions through controlling various cellular processes. Overactive Notch signal contributes to cancer development from leukemias to solid tumors. γ-Secretase is an intramembrane protease responsible for the final proteolytic step of Notch that releases the membrane-tethered Notch fragment for signaling. Therefore, γ-secretase is an attractive drug target in treating Notch-mediated cancers. However, the absence of high-throughput γ-secretase assay using Notch substrate has limited the identification and development of γ-secretase inhibitors that specifically target the Notch signaling pathway. Here, we report on the development of a 1536-well γ-secretase assay using a biotinylated recombinant Notch1 substrate. We effectively assimilated and miniaturized this newly developed Notch1 substrate with the AlphaLISA detection technology and demonstrated its robustness with a calculated Z’ score of 0.66. We further validated this optimized assay by performing a pilot screening against a chemical library consisting of ~5,600 chemicals and identified known γ-secretase inhibitors e.g. DAPT, and Calpeptin; as well as a novel γ-secretase inhibitor referred to as KD-I-085. This assay is the first reported 1536-well AlphaLISA format and represents a novel high-throughput Notch1-γ-secretase assay, which provides an unprecedented opportunity to discover Notch-selective γ-secretase inhibitors that can be potentially used for the treatment of cancer and other human disorders. PMID:23448293

Evaluating High-Throughput Ab Initio Gene Finders to Discover Proteins Encoded in Eukaryotic Pathogen Genomes Missed by Laboratory Techniques

PubMed Central

Goodswen, Stephen J.; Kennedy, Paul J.; Ellis, John T.

2012-01-01

Next generation sequencing technology is advancing genome sequencing at an unprecedented level. By unravelling the code within a pathogen’s genome, every possible protein (prior to post-translational modifications) can theoretically be discovered, irrespective of life cycle stages and environmental stimuli. Now more than ever there is a great need for high-throughput ab initio gene finding. Ab initio gene finders use statistical models to predict genes and their exon-intron structures from the genome sequence alone. This paper evaluates whether existing ab initio gene finders can effectively predict genes to deduce proteins that have presently missed capture by laboratory techniques. An aim here is to identify possible patterns of prediction inaccuracies for gene finders as a whole irrespective of the target pathogen. All currently available ab initio gene finders are considered in the evaluation but only four fulfil high-throughput capability: AUGUSTUS, GeneMark_hmm, GlimmerHMM, and SNAP. These gene finders require training data specific to a target pathogen and consequently the evaluation results are inextricably linked to the availability and quality of the data. The pathogen, Toxoplasma gondii, is used to illustrate the evaluation methods. The results support current opinion that predicted exons by ab initio gene finders are inaccurate in the absence of experimental evidence. However, the results reveal some patterns of inaccuracy that are common to all gene finders and these inaccuracies may provide a focus area for future gene finder developers. PMID:23226328

The UV Spectrum of the Ultracool Dwarf LSR J1835+3259 Observed with the Hubble Space Telescope

NASA Astrophysics Data System (ADS)

Saur, Joachim; Fischer, Christian; Wennmacher, Alexandre; Feldman, Paul; Roth, Lorenz; Strobel, D.; Reiners, Ansgar

2018-01-01

An interesting question about ultracool dwarfs is whether their emission is purely internally driven or partially powered by external processes similar to auroral emission known from planetary bodies of the solar system. Here we present Hubble Space Telescope observations of the energy fluxes of the M8.5 ultracool dwarf LSR J1835+3259 throughout the UV. The dwarf’s UV emission is generally weaker compared to younger-type M-dwarfs. We detect the Mg II doublet at 2800 A and constrain an average flux throughout the Near-UV. In the Far-UV without Lyman alpha, the ultracool dwarf is extremely faint with an energy output of at least a factor of 1000 smaller than expected from auroral emission physically similar to that on Jupiter. We also detect the red wing of the Lyman alpha emission. Our overall finding is that the observed UV spectrum of LSR J1835+3259 resembles the spectrum of M-dwarf stars much closer than the spectrum expected from Jupiter-like auroral processes.

The UV Spectrum of the Ultracool Dwarf LSR J1835+3259 Observed with the Hubble Space Telescope

NASA Astrophysics Data System (ADS)

Saur, Joachim; Fischer, Christian; Wennmacher, Alexandre; Feldman, Paul D.; Roth, Lorenz; Strobel, Darrell F.; Reiners, Ansgar

2018-05-01

An interesting question about ultracool dwarfs recently raised in the literature is whether their emission is purely internally driven or partially powered by external processes similar to planetary aurora known from the solar system. In this work, we present Hubble Space Telescope observations of the energy fluxes of the M8.5 ultracool dwarf LSR J1835+3259 throughout the ultraviolet (UV). The obtained spectra reveal that the object is generally UV-fainter compared with other earlier-type dwarfs. We detect the Mg II doublet at 2800 Å and constrain an average flux throughout the near-UV. In the far-UV without Lyα, the ultracool dwarf is extremely faint with an energy output at least a factor of 250 smaller as expected from auroral emission physically similar to that on Jupiter. We also detect the red wing of the Lyα emission. Our overall finding is that the observed UV spectrum of LSR J1835+3259 resembles the spectrum of mid/late-type M-dwarf stars relatively well, but it is distinct from a spectrum expected from Jupiter-like auroral processes.

Imprint Characteristics by Photo-Induced Solidification of Liquid Polymer

NASA Astrophysics Data System (ADS)

Komuro, Masanori; Taniguchi, Jun; Inoue, Seiji; Kimura, Naoya; Tokano, Yuji; Hiroshima, Hiroshi; Matsui, Shinji

2000-12-01

Nanoimprint lithography is an attractive technology for LSIs era below 40-nm critical dimension from the viewpoints of high-throughput and low-cost equipment. In order to avoid a pattern placement error due to thermal expansion in the conventional thermal imprint process, we attempted to replicate the mold pattern onto a liquid polymer, which was solidified using ultra-violet (UV) light irradiation at room temperature. The liquid polymer used here was supplied by TEIJIN SEIKI Co., and termed TSR-820. It was spin coated on slide glass to produce approximately 1.5-μm-thick polymer film. The thickness remained after UV exposure and rinsing in acetone was observed at the dose of 10 J/cm2 and it saturated about a UV exposure dose of 100 J/cm2 with an increase in the exposure dose. The mold fabricated of quartz plate was first pressed onto the polymer film at about 100 kg/cm2 and then the UV light was irradiated using an imprint apparatus developed for this work. After releasing the mold from the film, the substrate was rinsed in acetone to remove the residual liquid polymer. Eventually the minimum feature size of 100-nm line and 300-nm space pattern was successfully replicated in the polymer with good fidelity.

Optical Evaluation of Digital Micromirror Devices (DMDs) with UV-Grade Fused Silica, Sapphire, and Magnesium Fluoride Windows and Longterm Reflectance of Bare Devices

NASA Technical Reports Server (NTRS)

Quijada, Manuel A.; Travinsky, Anton; Vorobiev, Dmitry; Ninkov, Zoran; Raisanen, Alan; Robberto, Massimo; Heap, Sara

2016-01-01

Digital micromirror devices (DMDs) are commercial micro-electromechanical systems, consisting of millions of mirrors which can be individually addressed and tilted into one of two states (+/-12deg). These devices were developed to create binary patterns in video projectors, in the visible range. Commercially available DMDs are hermetically sealed and extremely reliable. Recently, DMDs have been identified as an alternative to microshutter arrays for space-based multi-object spectrometers (MOS). Specifically, the MOS at the heart of the proposed Galactic Evolution Spectroscopic Explorer (GESE) uses the DMD as a reprogrammable slit mask. Unfortunately, the protective borosilicate windows limit the use of DMDs in the UV and IR regimes, where the glass has insufficient throughput. In this work, we present our efforts to replace standard DMD windows with custom windows made from UV-grade fused silica, low-absorption optical sapphire (LAOS) and magnesium fluoride (MgF2). We present transmission measurements of the antireflection coated windows and the reflectance of bare (window removed) DMDs. Furthermore, we investigated the long-term stability of the DMD reflectance and experiments for coating DMD active area with a layer of pure aluminum (Al) to boost reflectance performance in the UV spectral range (200-400 nm).

Comparative Study of Three Methods for Affinity Measurements: Capillary Electrophoresis Coupled with UV Detection and Mass Spectrometry, and Direct Infusion Mass Spectrometry

NASA Astrophysics Data System (ADS)

Mironov, Gleb G.; Logie, Jennifer; Okhonin, Victor; Renaud, Justin B.; Mayer, Paul M.; Berezovski, Maxim V.

2012-07-01

We present affinity capillary electrophoresis and mass spectrometry (ACE-MS) as a comprehensive separation technique for label-free solution-based affinity analysis. The application of ACE-MS for measuring affinity constants between eight small molecule drugs [ibuprofen, s-flurbiprofen, diclofenac, phenylbutazone, naproxen, folic acid, resveratrol, and 4,4'-(propane-1,3-diyl) dibenzoic acid] and β-cyclodextrin is described. We couple on-line ACE with MS to combine the separation and kinetic capability of ACE together with the molecular weight and structural elucidation of MS in one system. To understand the full potential of ACE-MS, we compare it with two other methods: Direct infusion mass spectrometry (DIMS) and ACE with UV detection (ACE-UV). After the evaluation, DIMS provides less reliable equilibrium dissociation constants than separation-based ACE-UV and ACE-MS, and cannot be used solely for the study of noncovalent interactions. ACE-MS determines apparent dissociation constants for all reacting small molecules in a mixture, even in cases when drugs overlap with each other during separation. The ability of ACE-MS to interact, separate, and rapidly scan through m/z can facilitate the simultaneous affinity analysis of multiple interacting pairs, potentially leading to the high-throughput screening of drug candidates.

Optical evaluation of digital micromirror devices (DMDs) with UV-grade fused silica, sapphire, and magnesium fluoride windows and long-term reflectance of bare devices

NASA Astrophysics Data System (ADS)

Quijada, Manuel A.; Travinsky, Anton; Vorobiev, Dmitry; Ninkov, Zoran; Raisanen, Alan; Robberto, Massimo; Heap, Sara

2016-07-01

Digital micromirror devices (DMDs) are commercial micro-electromechanical systems, consisting of millions of mirrors which can be individually addressed and tilted into one of two states (+/-12°). These devices were developed to create binary patterns in video projectors, in the visible range. Commercially available DMDs are hermetically sealed and extremely reliable. Recently, DMDs have been identified as an alternative to microshutter arrays for space-based multi-object spectrometers (MOS). Specifically, the MOS at the heart of the proposed Galactic Evolution Spectroscopic Explorer (GESE) uses the DMD as a reprogrammable slit mask. Unfortunately, the protective borosilicate windows limit the use of DMDs in the UV and IR regimes, where the glass has insufficient throughput. In this work, we present our efforts to replace standard DMD windows with custom windows made from UV-grade fused silica, low-absorption optical sapphire (LAOS) and magnesium fluoride (MgF2). We present transmission measurements of the antireflection coated windows and the reflectance of bare (window removed) DMDs. Furthermore, we investigated the long-term stability of the DMD reflectance and experiments for coating DMD active area with a layer of pure aluminum (Al) to boost reflectance performance in the UV spectral range (200-400 nm).

Throughput Calibration of the 52x0.2E1 Aperture

NASA Astrophysics Data System (ADS)

Heap, Sara

2009-07-01

The Next Generation Spectral Library {NGSL} is a library of low-dispersion STIS spectra extending from 0.2-1.0 microns. So far, 378 stars with a wide range in metallicity have been observed. Despite their high S/N>100, many NGSL spectra have 5-10% systematic errors in their spectral energy distributions, which can be traced to throughput variations in the 52x0.2E1 aperture caused by vignetting of a wavelength-dependent asymmetric PSF. We propose to obtain STIS spectra of the HST standard star, BD+75D325, at several positions in the 52x0.2E1 aperture, which will enable us to calibrate the NGSL spectra properly.

8-Meter UV/Optical Space Telescope

NASA Technical Reports Server (NTRS)

Stahl, H. Philip

2008-01-01

This slide presentation proposes using the unprecedented capability of the planned Ares V launch vehicle, to place a 8 meter monolithic space telescope at the Earth-Sun L2 point. This new capability enables a new design pardigm -- simplicity. The six to eight meter class telescope with a massive high Technical Readiness Level ground observatory class monolithic primary mirror has been determined feasible. The proposed design, structural analysis, spacecraft design and shroud integration, thermal analysis, propulsion system, guidance navigation and pointing control assumptions about the avionics, and power systems, operational lifetime, and the idea of in-space servicing are reviewed.

Why soft UV-A damages DNA: An optical micromanipulation study

NASA Astrophysics Data System (ADS)

Rapp, A.; Greulich, K. O.

2013-09-01

Optical micromanipulation studies have solved a puzzle on DNA damage and repair. Such knowledge is crucial for understanding cancer and ageing. So far it was not understood, why the soft UV component of sunlight, UV-A, causes the dangerous DNA double strand breaks. The energy of UV-A photons is below 4 eV per photon, too low to directly cleave the corresponding chemical bonds in DNA. This is occasionally used to claim that artificial sunbeds, which mainly use UV-A, would not impose a risk on health. UV-A is only sufficient for induction of single strand breaks. The essential new observation is that, when on the opposite strand there is another single strand break at a distance of up to 20 base pairs. These two breaks will be converted into a break of the whole double strand with all its known consequences for cancer and ageing. However, in natural sun the effect is counteracted. Simultaneous red light illumination reduces UV induced DNA damages to 1/3. Since sunlight has a red component, skin tanning with natural sun is not as risky as might appear at a first glance.

Quantitative determination of ambroxol in tablets by derivative UV spectrophotometric method and HPLC.

PubMed

Dinçer, Zafer; Basan, Hasan; Göger, Nilgün Günden

2003-04-01

A derivative UV spectrophotometric method for the determination of ambroxol in tablets was developed. Determination of ambroxol in tablets was conducted by using first-order derivative UV spectrophotometric method at 255 nm (n = 5). Standards for the calibration graph ranging from 5.0 to 35.0 microg/ml were prepared from stock solution. The proposed method was accurate with 98.6+/-0.4% recovery value and precise with coefficient of variation (CV) of 1.22. These results were compared with those obtained by reference methods, zero-order UV spectrophotometric method and reversed-phase high-performance liquid chromatography (HPLC) method. A reversed-phase C(18) column with aqueous phosphate (0.01 M)-acetonitrile-glacial acetic acid (59:40:1, v/v/v) (pH 3.12) mobile phase was used and UV detector was set to 252 nm. Calibration solutions used in HPLC were ranging from 5.0 to 20.0 microg/ml. Results obtained by derivative UV spectrophotometric method was comparable to those obtained by reference methods, zero-order UV spectrophotometric method and HPLC, as far as ANOVA test, F(calculated) = 0.762 and F(theoretical) = 3.89, was concerned. Copyright 2003 Elsevier Science B.V.

The effect of UV radiation from oxygen and argon plasma on the adhesion of organosilicon coatings on polypropylene

NASA Astrophysics Data System (ADS)

Jaritz, M.; Behm, H.; Hopmann, Ch; Kirchheim, D.; Mitschker, F.; Awakowicz, P.; Dahlmann, R.

2017-01-01

The influence of ultraviolet (UV) radiation from oxygen and argon pretreatment plasmas on a plastic substrate has not been fully understood yet. In particular, its influence on the adhesion properties has not been sufficiently researched so far. This paper addresses this issue by comparing the bond strength of a plasmapolymerized silicon organic coating (SiO x C y H z ) on polypropylene (PP) after oxygen and argon plasma pretreatment and pretreatment by UV radiation emitted by the same plasmas. The UV radiation is isolated from the other species from the plasma by means of a magnesium fluoride (MgF2) optical filter. It could be shown that UV radiation originating from an oxygen plasma has a significant impact on both substrate surface chemistry and coating adhesion. The same maximum bond strength enhancement can be reached by pretreating the polypropylene surface either with pulsed oxygen plasma, or with only the UV radiation from this oxygen plasma. Also, similar surface chemistry and topography modifications are induced. For argon plasma no significant influence of its UV radiation on the substrate could be observed in this study.

Automated electrochemical synthesis and photoelectrochemical characterization of Zn1-xCo(x)O thin films for solar hydrogen production.

PubMed

Jaramillo, Thomas F; Baeck, Sung-Hyeon; Kleiman-Shwarsctein, Alan; Choi, Kyoung-Shin; Stucky, Galen D; McFarland, Eric W

2005-01-01

High-throughput electrochemical methods have been developed for the investigation of Zn1-xCo(x)O films for photoelectrochemical hydrogen production from water. A library of 120 samples containing 27 different compositions (0

Fast log P determination by ultra-high-pressure liquid chromatography coupled with UV and mass spectrometry detections.

PubMed

Henchoz, Yveline; Guillarme, Davy; Martel, Sophie; Rudaz, Serge; Veuthey, Jean-Luc; Carrupt, Pierre-Alain

2009-08-01

Ultra-high-pressure liquid chromatography (UHPLC) systems able to work with columns packed with sub-2 microm particles offer very fast methods to determine the lipophilicity of new chemical entities. The careful development of the most suitable experimental conditions presented here will help medicinal chemists for high-throughput screening (HTS) log P(oct) measurements. The approach was optimized using a well-balanced set of 38 model compounds and a series of 28 basic compounds such as beta-blockers, local anesthetics, piperazines, clonidine, and derivatives. Different organic modifiers and hybrid stationary phases packed with 1.7-microm particles were evaluated in isocratic as well as gradient modes, and the advantages and limitations of tested conditions pointed out. The UHPLC approach offered a significant enhancement over the classical HPLC methods, by a factor 50 in the lipophilicity determination throughput. The hyphenation of UHPLC with MS detection allowed a further increase in the throughput. Data and results reported herein prove that the UHPLC-MS method can represent a progress in the HTS-measurement of lipophilicity due to its speed (at least a factor of 500 with respect to HPLC approaches) and to an extended field of application.

Apollo scientific experiments data handbook

NASA Technical Reports Server (NTRS)

Eichelman, W. F. (Editor); Lauderdale, W. W. (Editor)

1974-01-01

A brief description of each of the Apollo scientific experiments was described, together with its operational history, the data content and formats, and the availability of the data. The lunar surface experiments described are the passive seismic, active seismic, lunar surface magnetometer, solar wind spectrometer, suprathermal ion detector, heat flow, charged particle, cold cathode gage, lunar geology, laser ranging retroreflector, cosmic ray detector, lunar portable magnetometer, traverse gravimeter, soil mechanics, far UV camera (lunar surface), lunar ejecta and meteorites, surface electrical properties, lunar atmospheric composition, lunar surface gravimeter, lunar seismic profiling, neutron flux, and dust detector. The orbital experiments described are the gamma-ray spectrometer, X-ray fluorescence, alpha-particle spectrometer, S-band transponder, mass spectrometer, far UV spectrometer, bistatic radar, IR scanning radiometer, particle shadows, magnetometer, lunar sounder, and laser altimeter. A brief listing of the mapping products available and information on the sample program were also included.

Energetic Particle Estimates for Stellar Flares

NASA Astrophysics Data System (ADS)

Youngblood, Allison; Chamberlin, Phil; Woods, Tom

2018-01-01

In the heliosphere, energetic particles are accelerated away from the Sun during solar flares and/or coronal mass ejections where they frequently impact the Earth and other solar system bodies. Solar (or stellar) energetic particles (SEPs) not only affect technological assets, but also influence mass loss and chemistry in planetary atmospheres (e.g., depletion of ozone). SEPs are increasingly recognized as an important factor in assessing exoplanet habitability, but we do not yet have constraints on SEP emission from any stars other than the Sun. Until indirect measurements are available, we must assume solar-like particle production and apply correlations between solar flares and SEPs detected near Earth to stellar flares. We present improved scaling relations between solar far-UV flare flux and >10 MeV proton flux near Earth. We apply these solar scaling relations to far-UV flares from exoplanet host stars and discuss the implications for modeling chemistry and mass loss in exoplanet atmospheres.

A study of the impact of the Space Shuttle environment on faint far-UV geophysical and astronomical phenomena

NASA Technical Reports Server (NTRS)

Lampton, Michael; Sasseen, Timothy P.; Wu, Xiaoyi; Bowyer, Stuart

1993-01-01

FAUST is a far ultraviolet (1400-1800 A) photon-counting imaging telescope featuring a wide field of view (7.6 deg) and a high sensitivity to extended emission features. During its flight as part of the ATLAS-1 payload aboard the STS-45 mission in March 1992, 19 deep-space nighttime viewing opportunities were utilized by FAUST. Here we report the observed fluxes and their time and space variations, and identify the signatures of postsunset airglow phenomena and Orbiter Vernier attitude control thruster firing events. We find that the Space Shuttle nighttime environment at 296 km altitude is often sufficiently dark to permit geophysical and astronomical UV observations down to levels on the order of 1000 photons/sq cm sr A sec, or 0.01 Rayleighs/A. We also find evidence for occasional geophysical fluxes of some tens or hundreds of Rayleighs in the upward-looking direction.

Vacuum deposition of iridium on large astronomical mirrors for use in the far UV

NASA Technical Reports Server (NTRS)

Herzig, H.; Spencer, R. S.

1982-01-01

An iridium coating has been deposited by electron-beam evaporation on a 0.91-m mirror which serves as the telescope primary of a sounding rocket instrument for far-UV spectrometry. The evaporation was carried out by applying 8 kV at 400 mA to the electron gun. Zone refined Ir of 99.99% purity was used, and the electron beam was electromagnetically swept over the surface of the evaporant. Under these conditions, deposition rates of 0.55 A/sec were achieved. The reflectance distribution achieved at a wavelength of 584 A was extremely uniform; the mean reflectance was 21.2% with a standard deviation of only 0.3%. This represents a substantial improvement over Al + MgF2 and Al + LiF coatings for applications involving multiple reflections and weak signals, as might be expected in a high-resolution spectrograph studying distant celestial objects.

Attempts to probe the ozone layer and the ultraviolet-B levels of the past.

PubMed

Björn, Lars Olof; McKenzie, Richard L

2007-07-01

To get a proper perspective on the current status of atmospheric ozone, which protects the biosphere from ultraviolet-B (UV-B; 280-315 nm) radiation, it would be of value to know how ozone and UV-B radiation have varied in the past. The record of worldwide ozone monitoring goes back only a few decades, and the record of reliable UV-B measurements is even shorter. Here we review indirect methods to assess their status further back in time. These include variations in the Sun's emission and how these affect the atmosphere, changes in the Earth's orbit, geologic imprints of atmospheric ozone, effects of catastrophic events such as volcanic eruptions, biological proxies of UV-B radiation, the spectral signature of terrestrial ozone in old recordings of star spectra, and the modeling of UV-B irradiance from ozone data and meteorological recordings. Although reliable reconstructions do not yet extend far into the past, there is some hope for future progress.

The Scope of Big Data in One Medicine: Unprecedented Opportunities and Challenges.

PubMed

McCue, Molly E; McCoy, Annette M

2017-01-01

Advances in high-throughput molecular biology and electronic health records (EHR), coupled with increasing computer capabilities have resulted in an increased interest in the use of big data in health care. Big data require collection and analysis of data at an unprecedented scale and represents a paradigm shift in health care, offering (1) the capacity to generate new knowledge more quickly than traditional scientific approaches; (2) unbiased collection and analysis of data; and (3) a holistic understanding of biology and pathophysiology. Big data promises more personalized and precision medicine for patients with improved accuracy and earlier diagnosis, and therapy tailored to an individual's unique combination of genes, environmental risk, and precise disease phenotype. This promise comes from data collected from numerous sources, ranging from molecules to cells, to tissues, to individuals and populations-and the integration of these data into networks that improve understanding of heath and disease. Big data-driven science should play a role in propelling comparative medicine and "one medicine" (i.e., the shared physiology, pathophysiology, and disease risk factors across species) forward. Merging of data from EHR across institutions will give access to patient data on a scale previously unimaginable, allowing for precise phenotype definition and objective evaluation of risk factors and response to therapy. High-throughput molecular data will give insight into previously unexplored molecular pathophysiology and disease etiology. Investigation and integration of big data from a variety of sources will result in stronger parallels drawn at the molecular level between human and animal disease, allow for predictive modeling of infectious disease and identification of key areas of intervention, and facilitate step-changes in our understanding of disease that can make a substantial impact on animal and human health. However, the use of big data comes with significant challenges. Here we explore the scope of "big data," including its opportunities, its limitations, and what is needed capitalize on big data in one medicine.

The Scope of Big Data in One Medicine: Unprecedented Opportunities and Challenges

PubMed Central

McCue, Molly E.; McCoy, Annette M.

2017-01-01

Advances in high-throughput molecular biology and electronic health records (EHR), coupled with increasing computer capabilities have resulted in an increased interest in the use of big data in health care. Big data require collection and analysis of data at an unprecedented scale and represents a paradigm shift in health care, offering (1) the capacity to generate new knowledge more quickly than traditional scientific approaches; (2) unbiased collection and analysis of data; and (3) a holistic understanding of biology and pathophysiology. Big data promises more personalized and precision medicine for patients with improved accuracy and earlier diagnosis, and therapy tailored to an individual’s unique combination of genes, environmental risk, and precise disease phenotype. This promise comes from data collected from numerous sources, ranging from molecules to cells, to tissues, to individuals and populations—and the integration of these data into networks that improve understanding of heath and disease. Big data-driven science should play a role in propelling comparative medicine and “one medicine” (i.e., the shared physiology, pathophysiology, and disease risk factors across species) forward. Merging of data from EHR across institutions will give access to patient data on a scale previously unimaginable, allowing for precise phenotype definition and objective evaluation of risk factors and response to therapy. High-throughput molecular data will give insight into previously unexplored molecular pathophysiology and disease etiology. Investigation and integration of big data from a variety of sources will result in stronger parallels drawn at the molecular level between human and animal disease, allow for predictive modeling of infectious disease and identification of key areas of intervention, and facilitate step-changes in our understanding of disease that can make a substantial impact on animal and human health. However, the use of big data comes with significant challenges. Here we explore the scope of “big data,” including its opportunities, its limitations, and what is needed capitalize on big data in one medicine. PMID:29201868

Changes in search rate but not in the dynamics of exogenous attention in action videogame players.

PubMed

Hubert-Wallander, Bjorn; Green, C Shawn; Sugarman, Michael; Bavelier, Daphne

2011-11-01

Many previous studies have shown that the speed of processing in attentionally demanding tasks seems enhanced following habitual action videogame play. However, using one of the diagnostic tasks for efficiency of attentional processing, a visual search task, Castel and collaborators (Castel, Pratt, & Drummond, Acta Psychologica 119:217-230, 2005) reported no difference in visual search rates, instead proposing that action gaming may change response execution time rather than the efficiency of visual selective attention per se. Here we used two hard visual search tasks, one measuring reaction time and the other accuracy, to test whether visual search rate may be changed by action videogame play. We found greater search rates in the gamer group than in the nongamer controls, consistent with increased efficiency in visual selective attention. We then asked how general the change in attentional throughput noted so far in gamers might be by testing whether exogenous attentional cues would lead to a disproportional enhancement in throughput in gamers as compared to nongamers. Interestingly, exogenous cues were found to enhance throughput equivalently between gamers and nongamers, suggesting that not all mechanisms known to enhance throughput are similarly enhanced in action videogamers.

Recent results from Daya Bay

NASA Astrophysics Data System (ADS)

Chua, Ming-chung

2016-11-01

Utilizing powerful nuclear reactors as antineutrino sources, high mountains to provide ample shielding from cosmic rays in the vicinity, and functionally identical detectors with large target volume for near-far relative measurement, the Daya Bay Reactor Neutrino Experiment has achieved unprecedented precision in measuring the neutrino mixing angle θ13 and the neutrino mass squared difference |Δm2ee|. I will report the latest Daya Bay results on neutrino oscillations and light sterile neutrino search.

Composite Spectra of Broad Absorption Line Quasars in SDSS-III BOSS

NASA Astrophysics Data System (ADS)

Herbst, Hanna; Hamann, Fred; Paris, Isabelle; Capellupo, Daniel M.

2017-01-01

We present preliminary results from a study of broad absorption line (BAL) quasars in the SDSS-III BOSS survey. We’re particularly interested in BALs because they arise from quasar outflows, which may be a source of feedback to the host galaxy. We analyze median composite spectra for BOSS QSOs in the redshift range 2.1 to 3.4 sorted by the strength of the BAL absorption troughs, parameterized by the Balnicity Index (BI), to study trends in the emission and absorption properties of BAL quasars. The wavelength coverage and high number of quasars observed in the BOSS survey allow us to examine BALs in the Lyman forest. Our main preliminary results when sorting the quasars by BI are 1) doublet absorption lines such as P V 1128A show a 1:1 ratio across all BI, indicating large column densities at all BI. This suggests that weaker BAL troughs result from smaller covering fractions rather than lower column densities. 2) The He II emission line, which is a measure of the far-UV/near-UV hardness of the ionizing continuum, is weaker in the larger BI composite spectra, indicating a far-UV spectral softening correlated with BI. This is consistent with the radiatively-driven BAL outflows being helped by intrinsically weaker ionizing continuum shapes (e.g., Baskin, Laor, and Hamann 2013). We also find a trend for slightly redder continuum slopes in the larger BI composite spectra, suggesting that the slope differences in the near-UV are also intrinsic.

Model-Based Design of Long-Distance Tracer Transport Experiments in Plants.

PubMed

Bühler, Jonas; von Lieres, Eric; Huber, Gregor J

2018-01-01

Studies of long-distance transport of tracer isotopes in plants offer a high potential for functional phenotyping, but so far measurement time is a bottleneck because continuous time series of at least 1 h are required to obtain reliable estimates of transport properties. Hence, usual throughput values are between 0.5 and 1 samples h -1 . Here, we propose to increase sample throughput by introducing temporal gaps in the data acquisition of each plant sample and measuring multiple plants one after each other in a rotating scheme. In contrast to common time series analysis methods, mechanistic tracer transport models allow the analysis of interrupted time series. The uncertainties of the model parameter estimates are used as a measure of how much information was lost compared to complete time series. A case study was set up to systematically investigate different experimental schedules for different throughput scenarios ranging from 1 to 12 samples h -1 . Selected designs with only a small amount of data points were found to be sufficient for an adequate parameter estimation, implying that the presented approach enables a substantial increase of sample throughput. The presented general framework for automated generation and evaluation of experimental schedules allows the determination of a maximal sample throughput and the respective optimal measurement schedule depending on the required statistical reliability of data acquired by future experiments.

Corrosive effect of environmental change on selected properties of polymer composites

NASA Astrophysics Data System (ADS)

Markovičová, L.; Zatkalíková, V.

2017-11-01

The development of composite materials and the related design and manufacturing technologies is one of the most important advances in the history of materials. Composites are multifunctional materials having unprecedented mechanical and physical properties that can be tailored to meet the requirements of a particular application. Ageing is also important and it is defined as the process of deterioration of engineering materials resulting from the combined effects of atmospheric radiation, heat, oxygen, water, micro-organisms and other atmospheric factors. The present article deals with monitoring the changes in the mechanical properties of composites with polymer matrix. The composite was formed from the PA matrix and glass fibers (GF). The composite contains 10, 20 and 30 % of glass fibers. The mechanical properties were evaluated on samples of the composite before and after UV radiation on the sample. Light microscopy was evaluated distribution of glass fibers in the polymer matrix and the presence of cracks caused by UV radiation.

The MESSIER surveyor: unveiling the ultra-low surface brightness universe

NASA Astrophysics Data System (ADS)

Valls-Gabaud, David; MESSIER Collaboration

2017-03-01

The MESSIER surveyor is a small mission designed at exploring the very low surface brightness universe. The satellite will drift-scan the entire sky in 6 filters covering the 200-1000 nm range, reaching unprecedented surface brightness levels of 34 and 37 mag arcsec-2 in the optical and UV, respectively. These levels are required to achieve the two main science goals of the mission: to critically test the ΛCDM paradigm of structure formation through (1) the detection and characterisation of ultra-faint dwarf galaxies, which are predicted to be extremely abundant around normal galaxies, but which remain elusive; and (2) tracing the cosmic web, which feeds dark matter and baryons into galactic haloes, and which may contain the reservoir of missing baryons at low redshifts. A large number of science cases, ranging from stellar mass loss episodes to intracluster light through fluctuations in the cosmological UV-optical background radiation are free by-products of the full-sky maps produced.

Spatial and directional control of self-assembled wrinkle patterns by UV light absorption

NASA Astrophysics Data System (ADS)

Kortz, C.; Oesterschulze, E.

2017-12-01

Wrinkle formation on surfaces is a phenomenon that is observed in layered systems with a compressed elastic thin capping layer residing on a viscoelastic film. So far, the properties of the viscoelastic material could only be changed replacing it by another material. Here, we propose to use a photosensitive material whose viscoelastic properties, Young's modulus, and glass transition temperature can easily be adjusted by the absorption of UV light. Employing UV lithography masks during the exposure, we gain additionally spatial and directional control of the self-assembled wrinkle pattern formation that relies on a spinodal decomposition process. Inspired by the results on surface wrinkling and its dependence on the intrinsic stress, we also derive a method to avoid wrinkling locally by tailoring the mechanical stress distribution in the layered system choosing UV masks with convex patterns. This is of particular interest in technical applications where the buckling of surfaces is undesirable.

Optical function of the finite-thickness corrugated pellicle of euglenoids.

PubMed

Inchaussandague, Marina E; Skigin, Diana C; Dolinko, Andrés E

2017-06-20

We explore the electromagnetic response of the pellicle of selected species of euglenoids. These microorganisms are bounded by a typical surface pellicle formed by S-shaped overlapping bands that resemble a corrugated film. We investigate the role played by this structure in the protection of the cell against UV radiation. By considering the pellicle as a periodically corrugated film of finite thickness, we applied the C-method to compute the reflectance spectra. The far-field results revealed reflectance peaks with a Q-factor larger than 10 3 in the UV region for all the illumination conditions investigated. The resonant behavior responsible for this enhancement has also been illustrated by near-field computations performed by a photonic simulation method. These results confirm that the corrugated pellicle of euglenoids shields the cell from harmful UV radiation and open up new possibilities for the design of highly UV-reflective surfaces.

Inconstant sun: how solar evolution has affected cosmic and ultraviolet radiation exposure over the history of life on Earth.

PubMed

Karam, P Andrew

2003-03-01

Four billion years ago, sea-level UV exposure was more than 400 times as intense as today, the dose from solar cosmic rays was five times present levels, and galactic cosmic rays accounted for only about 10% their current contribution to sea-level radiation doses. Exposure to cosmic radiation accounts for about 10% of natural background radiation exposure today and includes dose from galactic cosmic rays and solar charged particles. There is little exposure to ionizing wavelengths of UV due to absorption by ozone. The sun has evolved significantly over its life; in the past there were higher levels of particulate radiation and lower UV emissions from the sun, and a stronger solar wind reduced radiation dose in the inner solar system from galactic cosmic rays. Finally, since the early atmosphere contained little to no oxygen, surface levels of UV radiation were far higher in the past.

Biosynthesis and Heterologous Production of Vioprolides: Rational Biosynthetic Engineering and Unprecedented 4-Methylazetidinecarboxylic Acid Formation.

PubMed

Yan, Fu; Auerbach, David; Chai, Yi; Keller, Lena; Tu, Qiang; Hüttel, Stephan; Glemser, Amelie; Grab, Hanusch A; Bach, Thorsten; Zhang, Youming; Müller, Rolf

2018-04-25

Vioprolides are a promising class of anticancer and antifungal lead compounds produced by the myxobacterium Cystobacter violaceus Cb vi35. So far, nothing is known about their biosynthesis, including the origin of the unusual 4 methylazetidinecarboxylic acid (MAZ) moiety. We describe the vioprolide biosynthetic gene cluster and solve the production obstacle by expression in three heterologous hosts. Starting from unstable production in the wild type at single digit mg/L scale, we developed a stable host that eventually allowed for yields up to half a gram per liter in fermenters. Gene inactivations coupled with isotope feeding studies identified an S-adenosylmethionine (SAM) dependent enzyme and a methyltransferase as being responsible for the generation of the MAZ building block by a proposed mechanism unprecedented in bacteria. Furthermore, non-natural vioprolide derivatives were generated via rational genetic engineering. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Robot-Based High-Throughput Engineering of Alcoholic Polymer: Fullerene Nanoparticle Inks for an Eco-Friendly Processing of Organic Solar Cells.

PubMed

Xie, Chen; Tang, Xiaofeng; Berlinghof, Marvin; Langner, Stefan; Chen, Shi; Späth, Andreas; Li, Ning; Fink, Rainer H; Unruh, Tobias; Brabec, Christoph J

2018-06-27

Development of high-quality organic nanoparticle inks is a significant scientific challenge for the industrial production of solution-processed organic photovoltaics (OPVs) with eco-friendly processing methods. In this work, we demonstrate a novel, robot-based, high-throughput procedure performing automatic poly(3-hexylthio-phene-2,5-diyl) and indene-C 60 bisadduct nanoparticle ink synthesis in nontoxic alcohols. A novel methodology to prepare particle dispersions for fully functional OPVs by manipulating the particle size and solvent system was studied in detail. The ethanol dispersion with a particle diameter of around 80-100 nm exhibits reduced degradation, yielding a power conversion efficiency of 4.52%, which is the highest performance reported so far for water/alcohol-processed OPV devices. By successfully deploying the high-throughput robot-based approach for an organic nanoparticle ink preparation, we believe that the findings demonstrated in this work will trigger more research interest and effort on eco-friendly industrial production of OPVs.

Identification and removal of low-complexity sites in allele-specific analysis of ChIP-seq data.

PubMed

Waszak, Sebastian M; Kilpinen, Helena; Gschwind, Andreas R; Orioli, Andrea; Raghav, Sunil K; Witwicki, Robert M; Migliavacca, Eugenia; Yurovsky, Alisa; Lappalainen, Tuuli; Hernandez, Nouria; Reymond, Alexandre; Dermitzakis, Emmanouil T; Deplancke, Bart

2014-01-15

High-throughput sequencing technologies enable the genome-wide analysis of the impact of genetic variation on molecular phenotypes at unprecedented resolution. However, although powerful, these technologies can also introduce unexpected artifacts. We investigated the impact of library amplification bias on the identification of allele-specific (AS) molecular events from high-throughput sequencing data derived from chromatin immunoprecipitation assays (ChIP-seq). Putative AS DNA binding activity for RNA polymerase II was determined using ChIP-seq data derived from lymphoblastoid cell lines of two parent-daughter trios. We found that, at high-sequencing depth, many significant AS binding sites suffered from an amplification bias, as evidenced by a larger number of clonal reads representing one of the two alleles. To alleviate this bias, we devised an amplification bias detection strategy, which filters out sites with low read complexity and sites featuring a significant excess of clonal reads. This method will be useful for AS analyses involving ChIP-seq and other functional sequencing assays. The R package abs filter for library clonality simulations and detection of amplification-biased sites is available from http://updepla1srv1.epfl.ch/waszaks/absfilter

International Barcode of Life: Focus on big biodiversity in South Africa.

PubMed

Adamowicz, Sarah J; Hollingsworth, Peter M; Ratnasingham, Sujeevan; van der Bank, Michelle

2017-11-01

Participants in the 7th International Barcode of Life Conference (Kruger National Park, South Africa, 20-24 November 2017) share the latest findings in DNA barcoding research and its increasingly diversified applications. Here, we review prevailing trends synthesized from among 429 invited and contributed abstracts, which are collated in this open-access special issue of Genome. Hosted for the first time on the African continent, the 7th Conference places special emphasis on the evolutionary origins, biogeography, and conservation of African flora and fauna. Within Africa and elsewhere, DNA barcoding and related techniques are being increasingly used for wildlife forensics and for the validation of commercial products, such as medicinal plants and seafood species. A striking trend of the conference is the dramatic rise of studies on environmental DNA (eDNA) and on diverse uses of high-throughput sequencing techniques. Emerging techniques in these areas are opening new avenues for environmental biomonitoring, managing species-at-risk and invasive species, and revealing species interaction networks in unprecedented detail. Contributors call for the development of validated community standards for high-throughput sequence data generation and analysis, to enable the full potential of these methods to be realized for understanding and managing biodiversity on a global scale.

Zooming in on the Starburst at the Core of the Phoenix Cluster

NASA Astrophysics Data System (ADS)

McDonald, Michael

2011-10-01

In a recently published letter to Nature, we report the discovery of the most X-ray luminous galaxy cluster in the known Universe, within which the intracluster medium is cooling at an unprecedented rate. In the core of this cluster, the brightest cluster galaxy is forming stars at an unmatched rate of 740 Msun/yr, which is highly unusual for this class of galaxy which are typically referred to as "red and dead". We suspect that the extreme cooling and star formation rates are intimately linked: the cooling intracluster gas is most likely providing fuel for the starburst. We request 2 orbits of near-UV and optical broadband WFC3-UVIS imaging in order to morphologically classify this starburst as a result of i} cooling, infalling gas {filamentary UV emission}; ii} a recent merger {tidal tails with both UV and optical emission}; or iii} a starburst- or AGN-driven wind {wide opening angle}. These data will also allow us to determine the stellar populations of both the starburst and the underlying, older stellar populations, and will provide a much sharper view of the central AGN, allowing us to more carefully extract the contribution to the extended UV emission from young stars. Our early results have already received substantial attention from the international press, and we expect that a dramatically improved picture of the heart of this cluster would stir up as much, if not more, interest from the public.

UV-laser-based microscopic dissection of tree rings - a novel sampling tool for δ(13) C and δ(18) O studies.

PubMed

Schollaen, Karina; Heinrich, Ingo; Helle, Gerhard

2014-02-01

UV-laser-based microscopic systems were utilized to dissect and sample organic tissue for stable isotope measurements from thin wood cross-sections. We tested UV-laser-based microscopic tissue dissection in practice for high-resolution isotopic analyses (δ(13) C/δ(18) O) on thin cross-sections from different tree species. The method allows serial isolation of tissue of any shape and from millimetre down to micrometre scales. On-screen pre-defined areas of interest were automatically dissected and collected for mass spectrometric analysis. Three examples of high-resolution isotopic analyses revealed that: in comparison to δ(13) C of xylem cells, woody ray parenchyma of deciduous trees have the same year-to-year variability, but reveal offsets that are opposite in sign depending on whether wholewood or cellulose is considered; high-resolution tree-ring δ(18) O profiles of Indonesian teak reflect monsoonal rainfall patterns and are sensitive to rainfall extremes caused by ENSO; and seasonal moisture signals in intra-tree-ring δ(18) O of white pine are weighted by nonlinear intra-annual growth dynamics. The applications demonstrate that the use of UV-laser-based microscopic dissection allows for sampling plant tissue at ultrahigh resolution and unprecedented precision. This new technique facilitates sampling for stable isotope analysis of anatomical plant traits like combined tree eco-physiological, wood anatomical and dendroclimatological studies. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

The LUVOIR Ultraviolet Multi-Object Spectrograph (LUMOS): instrument definition and design

NASA Astrophysics Data System (ADS)

France, Kevin; Fleming, Brian; West, Garrett; McCandliss, Stephan R.; Bolcar, Matthew R.; Harris, Walter; Moustakas, Leonidas; O'Meara, John M.; Pascucci, Ilaria; Rigby, Jane; Schiminovich, David; Tumlinson, Jason

2017-08-01

The Large Ultraviolet/Optical/Infrared Surveyor (LUVOIR) is one of four large mission concepts currently undergoing community study for consideration by the 2020 Astronomy and Astrophysics Decadal Survey. LUVOIR is being designed to pursue an ambitious program of exoplanetary discovery and characterization, cosmic origins astrophysics, and planetary science. The LUVOIR study team is investigating two large telescope apertures (9- and 15-meter primary mirror diameters) and a host of science instruments to carry out the primary mission goals. Many of the exoplanet, cosmic origins, and planetary science goals of LUVOIR require high-throughput, imaging spectroscopy at ultraviolet (100 - 400 nm) wavelengths. The LUVOIR Ultraviolet Multi-Object Spectrograph, LUMOS, is being designed to support all of the UV science requirements of LUVOIR, from exoplanet host star characterization to tomography of circumgalactic halos to water plumes on outer solar system satellites. LUMOS offers point source and multi-object spectroscopy across the UV bandpass, with multiple resolution modes to support different science goals. The instrument will provide low (R = 8,000 - 18,000) and medium (R = 30,000 - 65,000) resolution modes across the far-ultraviolet (FUV: 100 - 200 nm) and nearultraviolet (NUV: 200 - 400 nm) windows, and a very low resolution mode (R = 500) for spectroscopic investigations of extremely faint objects in the FUV. Imaging spectroscopy will be accomplished over a 3 × 1.6 arcminute field-of-view by employing holographically-ruled diffraction gratings to control optical aberrations, microshutter arrays (MSA) built on the heritage of the Near Infrared Spectrograph (NIRSpec) on the James Webb Space Telescope (JWST), advanced optical coatings for high-throughput in the FUV, and next generation large-format photon-counting detectors. The spectroscopic capabilities of LUMOS are augmented by an FUV imaging channel (100 - 200nm, 13 milliarcsecond angular resolution, 2 × 2 arcminute field-of-view) that will employ a complement of narrow- and medium-band filters. The instrument definition, design, and development are being carried out by an instrument study team led by the University of Colorado, Goddard Space Flight Center, and the LUVOIR Science and Technology Definition Team. LUMOS has recently completed a preliminary design in Goddard's Instrument Design Laboratory and is being incorporated into the working LUVOIR mission concept. In this proceeding, we describe the instrument requirements for LUMOS, the instrument design, and technology development recommendations to support the hardware required for LUMOS. We present an overview of LUMOS' observing modes and estimated performance curves for effective area, spectral resolution, and imaging performance. Example "LUMOS 100-hour Highlights" observing programs are presented to demonstrate the potential power of LUVOIR's ultraviolet spectroscopic capabilities.

Development of a high-throughput assay for measuring lipase activity using natural triacylglycerols coated on microtiter plates.

PubMed

Serveau-Avesque, Carole; Verger, Robert; Rodriguez, Jorge A; Abousalham, Abdelkarim

2013-09-21

We have designed a convenient, specific, sensitive and continuous lipase assay based on the use of natural triacylglycerols (TAGs) from the Aleurites fordii seed oil which contains α-eleostearic acid (9,11,13,cis,trans,trans-octadecatrienoic acid) and which was coated in the wells of microtiter plates. The coated TAG film cannot be desorbed by the various buffers used during the lipase assay. Upon lipase action, α-eleostearic acid is liberated and desorbed from the interface and then solubilized into the micellar phase. Consequently, the UV absorbance of the α-eleostearic acid is considerably enhanced due to the transformation from an adsorbed to a water soluble state. The lipase activity can be measured continuously by recording the variations with time of the UV absorption spectra. The rate of lipolysis was monitored by measuring the increase of OD at 272 nm, which was found to be linear with time and directly proportional to the amount of added lipase. This microtiter plate lipase assay, based on coated TAGs, presents various advantages as compared to the classical systems: (i) coated TAGs on the microtiter plates could be stored for a long-time at 4 °C, (ii) higher sensitivity in lipase detection, (iii) good reproducibility, and (iv) increase of signal to noise ratio due to high UV absorption after transfer of α-eleostearic acid from an adsorbed to a soluble state. Low concentrations, down to 1 pg mL(-1) of pure Thermomyces lanuginosus or human pancreatic lipase, could be detected under standard assay conditions. The detection sensitivity of this coated method is around 1000 times higher as compared to those obtained with the classical emulsified systems. This continuous high throughput lipase assay could be used to screen new lipases and/or lipase inhibitors present in various biological samples.

Toward large-area roll-to-roll printed nanophotonic sensors

NASA Astrophysics Data System (ADS)

Karioja, Pentti; Hiltunen, Jussi; Aikio, Sanna M.; Alajoki, Teemu; Tuominen, Jarkko; Hiltunen, Marianne; Siitonen, Samuli; Kontturi, Ville; Böhlen, Karl; Hauser, Rene; Charlton, Martin; Boersma, Arjen; Lieberzeit, Peter; Felder, Thorsten; Eustace, David; Haskal, Eliav

2014-05-01

Polymers have become an important material group in fabricating discrete photonic components and integrated optical devices. This is due to their good properties: high optical transmittance, versatile processability at relative low temperatures and potential for low-cost production. Recently, nanoimprinting or nanoimprint lithography (NIL) has obtained a plenty of research interest. In NIL, a mould is pressed against a substrate coated with a moldable material. After deformation of the material, the mold is separated and a replica of the mold is formed. Compared with conventional lithographic methods, imprinting is simple to carry out, requires less-complicated equipment and can provide high-resolution with high throughput. Nanoimprint lithography has shown potential to become a method for low-cost and high-throughput fabrication of nanostructures. We show the development process of nano-structured, large-area multi-parameter sensors using Photonic Crystal (PC) and Surface Enhanced Raman Scattering (SERS) methodologies for environmental and pharmaceutical applications. We address these challenges by developing roll-to-roll (R2R) UV-nanoimprint fabrication methods. Our development steps are the following: Firstly, the proof of concept structures are fabricated by the use of wafer-level processes in Si-based materials. Secondly, the master molds of successful designs are fabricated, and they are used to transfer the nanophotonic structures into polymer materials using sheet-level UV-nanoimprinting. Thirdly, the sheet-level nanoimprinting processes are transferred to roll-to-roll fabrication. In order to enhance roll-to-roll manufacturing capabilities, silicone-based polymer material development was carried out. In the different development phases, Photonic Crystal and SERS sensor structures with increasing complexities were fabricated using polymer materials in order to enhance sheet-level and roll-to-roll manufacturing processes. In addition, chemical and molecular imprint (MIP) functionalization methods were applied in the sensor demonstrators. In this paper, the process flow in fabricating large-area nanophotonic structures by the use of sheet-level and roll-to-roll UV- nanoimprinting is reported.

A study of meteor spectroscopy and physics from earth-orbit: A preliminary survey into ultraviolet meteor spectra

NASA Technical Reports Server (NTRS)

Meisel, D. D.

1976-01-01

Preliminary data required to extrapolate available meteor physics information (obtained in the photographic, visual and near ultraviolet spectral regions) into the middle and far ultraviolet are presented. Wavelength tables, telluric attenuation factors, meteor rates, and telluric airglow data are summarized in the context of near-earth observation vehicle parameters using moderate to low spectral resolution instrumentation. Considerable attenuation is given to the problem of meteor excitation temperatures since these are required to predict the strength of UV features. Relative line intensities are computed for an assumed chondritic composition. Features of greatest predicted intensities, the major problems in meteor physics, detectability of UV meteor events, complications of spacecraft motion, and UV instrumentation options are summarized.

On-chip ultraviolet holography for high-throughput nanoparticle and biomolecule detection

NASA Astrophysics Data System (ADS)

Daloglu, Mustafa Ugur; Ray, Aniruddha; Gorocs, Zoltán.; Xiong, Matthew; Malik, Ravinder; Bitan, Gal; McLeod, Euan; Ozcan, Aydogan

2018-02-01

Nanoparticle and biomolecule imaging has become an important need for various applications. In an effort to find a higher throughput alternative to existing devices, we have designed a lensfree on-chip holographic imaging platform operating at an ultraviolet (UV) wavelength of 266 nm. With a custom-designed free-space light delivery system to illuminate the sample that is placed very close (<0.5 mm) to an opto-electronic image sensor chip, without any imaging lenses in between, the full active area of the imager chip (>16 mm2 ) was utilized as the imaging field-of-view (FOV) capturing holographic signatures of target objects on a chip. These holograms were then digitally back propagated to extract both the amplitude and phase information of the sample. The increased forward scattering from nanoparticles due to this shorter illumination wavelength has enabled us to image individual particles that are smaller than 30 nm over an FOV of >16 mm2 . Our platform was further utilized in high-contrast imaging of nanoscopic biomolecule aggregates since 266 nm illumination light is strongly absorbed by biomolecules including proteins and nucleic acids. Aggregates of Cu/Zn-superoxide dismutase (SOD1), which has been linked to a fatal neurodegenerative disease, ALS (amyotrophic lateral sclerosis), have been imaged with significantly improved contrast compared to imaging at visible wavelengths. This unique UV imaging modality could be valuable for biomedical applications (e.g., viral load measurements) and environmental monitoring including air and water quality monitoring.

Digital imaging of root traits (DIRT): a high-throughput computing and collaboration platform for field-based root phenomics.

PubMed

Das, Abhiram; Schneider, Hannah; Burridge, James; Ascanio, Ana Karine Martinez; Wojciechowski, Tobias; Topp, Christopher N; Lynch, Jonathan P; Weitz, Joshua S; Bucksch, Alexander

2015-01-01

Plant root systems are key drivers of plant function and yield. They are also under-explored targets to meet global food and energy demands. Many new technologies have been developed to characterize crop root system architecture (CRSA). These technologies have the potential to accelerate the progress in understanding the genetic control and environmental response of CRSA. Putting this potential into practice requires new methods and algorithms to analyze CRSA in digital images. Most prior approaches have solely focused on the estimation of root traits from images, yet no integrated platform exists that allows easy and intuitive access to trait extraction and analysis methods from images combined with storage solutions linked to metadata. Automated high-throughput phenotyping methods are increasingly used in laboratory-based efforts to link plant genotype with phenotype, whereas similar field-based studies remain predominantly manual low-throughput. Here, we present an open-source phenomics platform "DIRT", as a means to integrate scalable supercomputing architectures into field experiments and analysis pipelines. DIRT is an online platform that enables researchers to store images of plant roots, measure dicot and monocot root traits under field conditions, and share data and results within collaborative teams and the broader community. The DIRT platform seamlessly connects end-users with large-scale compute "commons" enabling the estimation and analysis of root phenotypes from field experiments of unprecedented size. DIRT is an automated high-throughput computing and collaboration platform for field based crop root phenomics. The platform is accessible at http://www.dirt.iplantcollaborative.org/ and hosted on the iPlant cyber-infrastructure using high-throughput grid computing resources of the Texas Advanced Computing Center (TACC). DIRT is a high volume central depository and high-throughput RSA trait computation platform for plant scientists working on crop roots. It enables scientists to store, manage and share crop root images with metadata and compute RSA traits from thousands of images in parallel. It makes high-throughput RSA trait computation available to the community with just a few button clicks. As such it enables plant scientists to spend more time on science rather than on technology. All stored and computed data is easily accessible to the public and broader scientific community. We hope that easy data accessibility will attract new tool developers and spur creative data usage that may even be applied to other fields of science.

Emerging insights on intestinal dysbiosis during bacterial infections☆

PubMed Central

Pham, Tu Anh N; Lawley, Trevor D

2014-01-01

Infection of the gastrointestinal tract is commonly linked to pathological imbalances of the resident microbiota, termed dysbiosis. In recent years, advanced high-throughput genomic approaches have allowed us to examine the microbiota in an unprecedented manner, revealing novel biological insights about infection-associated dysbiosis at the community and individual species levels. A dysbiotic microbiota is typically reduced in taxonomic diversity and metabolic function, and can harbour pathobionts that exacerbate intestinal inflammation or manifest systemic disease. Dysbiosis can also promote pathogen genome evolution, while allowing the pathogens to persist at high density and transmit to new hosts. A deeper understanding of bacterial pathogenicity in the context of the intestinal microbiota should unveil new approaches for developing diagnostics and therapies for enteropathogens. PMID:24581695

Optogenetic Approaches to Drug Discovery in Neuroscience and Beyond.

PubMed

Zhang, Hongkang; Cohen, Adam E

2017-07-01

Recent advances in optogenetics have opened new routes to drug discovery, particularly in neuroscience. Physiological cellular assays probe functional phenotypes that connect genomic data to patient health. Optogenetic tools, in particular tools for all-optical electrophysiology, now provide a means to probe cellular disease models with unprecedented throughput and information content. These techniques promise to identify functional phenotypes associated with disease states and to identify compounds that improve cellular function regardless of whether the compound acts directly on a target or through a bypass mechanism. This review discusses opportunities and unresolved challenges in applying optogenetic techniques throughout the discovery pipeline - from target identification and validation, to target-based and phenotypic screens, to clinical trials. Copyright © 2017 Elsevier Ltd. All rights reserved.

Microfluidic technologies for synthetic biology.

PubMed

Vinuselvi, Parisutham; Park, Seongyong; Kim, Minseok; Park, Jung Min; Kim, Taesung; Lee, Sung Kuk

2011-01-01

Microfluidic technologies have shown powerful abilities for reducing cost, time, and labor, and at the same time, for increasing accuracy, throughput, and performance in the analysis of biological and biochemical samples compared with the conventional, macroscale instruments. Synthetic biology is an emerging field of biology and has drawn much attraction due to its potential to create novel, functional biological parts and systems for special purposes. Since it is believed that the development of synthetic biology can be accelerated through the use of microfluidic technology, in this review work we focus our discussion on the latest microfluidic technologies that can provide unprecedented means in synthetic biology for dynamic profiling of gene expression/regulation with high resolution, highly sensitive on-chip and off-chip detection of metabolites, and whole-cell analysis.

Probing the accretion flow and emission-line regions of M81, the nearest broad-lined low-luminosity AGN

NASA Astrophysics Data System (ADS)

Barth, Aaron

2017-08-01

The nucleus of M81 is an object of singular importance as a template for low-luminosity accretion flows onto supermassive black holes. We propose to obtain a complete, small-aperture, high S/N STIS UV/optical spectrum of the M81 nucleus and multi-filter WFC3 imaging covering the UV through near-IR. Such data have never previously been obtained with HST; the only prior archival UV/optical spectra of M81 have low S/N, incomplete wavelength coverage, and are strongly contaminated by starlight. Combined with new Chandra X-ray data, our proposed observations will comprise the definitive reference dataset on the spectral energy distribution of this benchmark low-luminosity AGN. These data will provide unique new constraints on the possible contribution of a truncated thin accretion disk to the AGN emission spectrum, clarifying a fundamental property of low-luminosity accretion flows. The data will additionally provide new insights into broad-line region structure and black hole mass scaling relationships at the lowest AGN luminosities, and spatially resolved diagnostics of narrow-line region excitation conditions at unprecedented spatial resolution to assess the impact of the AGN on the ionization state of the gas in the host galaxy bulge.

Cospatial Longslit UV-Optical Spectra of Ten Galactic Planetary Nebulae with HST STIS: Description of observations, global emission-line measurements, and empirical CNO abundances

NASA Astrophysics Data System (ADS)

Dufour, R. J.; Kwitter, K. B.; Shaw, R. A.; Balick, B.; Henry, R. B. C.; Miller, T. R.; Corradi, R. L. M.

2015-01-01

This poster describes details of HST Cycle 19 (program GO 12600), which was awarded 32 orbits of observing time with STIS to obtain the first cospatial UV-optical spectra of 10 Galactic planetary nebulae (PNe). The observational goal was to measure the UV emission lines of carbon and nitrogen with unprecedented S/N and wavelength and spatial resolution along the disk of each object over a wavelength range 1150-10270 Ang . The PNe were chosen such that each possessed a near-solar metallicity but the group together spanned a broad range in N/O. This poster concentrates on describing the observations, emission-line measurements integrated along the entire slit lengths, ionic abundances, and estimated total elemental abundances using empirical ionization correction factors and the ELSA code. Related posters by co-authors in this session concentrate on analyzing CNO abundances, progenitor masses and nebular properties of the best-observed targets using photoionization modeling of the global emission-line measurements [Henry et al.] or detailed analyses of spatial variations in electron temperatures, densities, and abundances along the sub arcsecond resolution slits [Miller et al. & Shaw et al.]. We gratefully acknowledge AURA/STScI for the GO 12600 program support, both observational and financial.

Effects of solar flares on the ionosphere of Mars.

PubMed

Mendillo, Michael; Withers, Paul; Hinson, David; Rishbeth, Henry; Reinisch, Bodo

2006-02-24

All planetary atmospheres respond to the enhanced x-rays and ultraviolet (UV) light emitted from the Sun during a flare. Yet only on Earth are observations so continuous that the consequences of these essentially unpredictable events can be measured reliably. Here, we report observations of solar flares, causing up to 200% enhancements to the ionosphere of Mars, as recorded by the Mars Global Surveyor in April 2001. Modeling the altitude dependence of these effects requires that relative enhancements in the soft x-ray fluxes far exceed those in the UV.

Compact Ozone Lidar for Atmospheric Ozone and Aerosol Measurements

NASA Technical Reports Server (NTRS)

Marcia, Joel; DeYoung, Russell J.

2007-01-01

A small compact ozone differential absorption lidar capable of being deployed on a small aircraft or unpiloted atmospheric vehicle (UAV) has been tested. The Ce:LiCAF tunable UV laser is pumped by a quadrupled Nd:YLF laser. Test results on the laser transmitter demonstrated 1.4 W in the IR and 240 mW in the green at 1000 Hz. The receiver consists of three photon-counting channels, which are a far field PMT, a near field UV PMT, and a green PMT. Each channel was tested for their saturation characteristics.

The FIREBall fiber-fed UV spectrograph

NASA Astrophysics Data System (ADS)

Tuttle, Sarah E.; Schiminovich, David; Milliard, Bruno; Grange, Robert; Martin, D. Christopher; Rahman, Shahinur; Deharveng, Jean-Michel; McLean, Ryan; Tajiri, Gordon; Matuszewski, M.

2008-07-01

FIREBall (Faint Intergalactic Redshifted Emission Balloon) had a successful first engineering flight in July of 2007 from Palestine, Texas. Here we detail the design and construction of the spectrograph. FIREBall consists of a 1m telescope coupled to a fiber-fed ultraviolet spectrograph flown on a short duration balloon. The spectrograph is designed to map hydrogen and metal line emission from the intergalactic medium at several redshifts below z=1, exploiting a small window in atmospheric oxygen absorption at balloon altitudes. The instrument is a wide-field IFU fed by almost 400 fibers. The Offner mount spectrograph is designed to be sensitive in the 195-215nm window accessible at our altitudes of 35-40km. We are able to observe Lyα, as well as OVI and CIV doublets, from 0.3 < z < 0.9. Observations of UV bright B stars and background measurements allow characterization of throughput for the entire system and will inform future flights.

Ten years of OMI observations: scientific highlights and impacts on the new generation of UV/VIS satellite instrumentation

NASA Astrophysics Data System (ADS)

Levelt, Pieternel; Veefkind, Pepijn; Bhartia, Pawan; Joiner, Joanna; Tamminen, Johanna; OMI Science Team

2014-05-01

On July 15, 2004 Ozone Monitoring Instrument (OMI) was successfully launched from the Vandenberg military air force basis in California, USA, on NASA's EOS-Aura spacecraft. OMI is the first of a new generation of UV/VIS nadir solar backscatter imaging spectrometers, which provides nearly global coverage in one day with an unprecedented spatial resolution of 13 x 24 km2. OMI measures solar irradiance and Earth radiances in the wavelength range of 270 to 500 nm with a spectral resolution of about 0.5 nm. OMI is designed and built by the Netherlands and Finland and is also a third party mission of ESA. The major step that was made in the OMI instrument compared to its predecessors is the use of 2-dimensional detector arrays (CCDs) in a highly innovative small optical design. These innovations enable the combination of a high spatial resolution and a good spectral resolution with daily global coverage. OMI measures a range of trace gases (O3, NO2, SO2, HCHO, BrO, OClO, H2O), clouds and aerosols. Albeit OMI is already 5 years over its design lifetime, the instrument is still fully operational. The successor of OMI is TROPOMI (TROPOspheric Monitoring Instrument) on the Copernicus Sentinel-5 precursor mission, planned for launch in 2015. OMI's unique capabilities rely in measuring tropospheric trace gases with a small footprint and daily global coverage. The unprecedented spatial resolution of the instrument revealed for the first time tropospheric pollution maps on a daily basis with urban scale resolution leading to improved air quality forecasts. The OMI measurements also improve our understanding of air quality and the interaction between air quality and climate change by combining measurements of air pollutants and aerosols. In recent years the data are also used for obtaining high-resolution global emission maps using inverse modelling or related techniques, challenging the bottom-up inventories based emission maps. In addition to scientific research, OMI also contributes to several operational services, including volcanic plume warning systems for aviation, UV forecasts and the air quality forecasts. In this invited talk an overview will be given of unique findings and new scientific results based on OMI data over the last 10 years and which unique OMI instrument features are recurring in the new generation of UV/VIS satellite instrumentation in Europe, USA and Asia.

CNO Processing in Massive Algol Binaries

NASA Technical Reports Server (NTRS)

Wade, Richard A.

1998-01-01

This program, used ultraviolet observations by the IUE Observatory along with other tools to search for abundance anomalies indicative of CNO processing in the secondary (mass-donating) stars of six interacting binary systems. Related IUE-based activities were also undertaken under this grant. Two Supplements to the grant were awarded. Supplement No. 1 was in connection with the NASA Grant Supplements for Education program, for a workshop for elementary school science teachers. The two sessions of the workshop were held October 24 and November 14, 1992. Eighteen school teachers from central Pennsylvania, grades 1-7, participated in the workshop, for which they received one unit of in-service training credit from their Intermediate Unit. Supplement No. 2 was awarded for additional IUE observations of the Algol stars V342 Aql and TU Mon. Observations of all six candidate stars were made with IUE, and attention was narrowed to TU Mon in particular, for which further IUE observations were made using Director's discretionary time. Observations of TU Mon were also carried out with the Voyager UV spectrometers, and optical spectroscopy was obtained on several occasions at Penn State's Black Moshannon Observatory. Photometric data on TU Mon were acquired by Dr. Paul Etzel at Mt. Laguna Observatory (MLO). McGouldrick was employed part-time during the Fall academic semester to assist in accessing the IUE Archive, and to correlate data on some cataclysmic variables and related objects that were observed with both IUE and the Voyager Far Ultraviolet Spectrometers. Approximately 21 relevant binary systems were observed with the Voyager UVS over the past decade, and a paper is being prepared for eventual publication that will serve as an index to the UVS data archive on these stars, providing observation dates, mean count rates in far and extreme UV bands, and a discussion of the relevant literature concerning the far UV behavior (including correlative IUE information from the archive and the literature). Much of the activity under the grant was in connection with V342 Aquilae, a 3.39 day Algol system thought to be in a state of rapid mass transfer. The goal was to combine optical and ultraviolet data to arrive at a robust, informative interpretation of this unique binary system. Complete orbital phase coverage of V342 Aql was obtained spectroscopically and photometrically.

CNO Processing in Massive Algol Binaries

NASA Astrophysics Data System (ADS)

Wade, Richard A.

1998-08-01

This program, used ultraviolet observations by the IUE Observatory along with other tools to search for abundance anomalies indicative of CNO processing in the secondary (mass-donating) stars of six interacting binary systems. Related IUE-based activities were also undertaken under this grant. Two Supplements to the grant were awarded. Supplement No. 1 was in connection with the NASA Grant Supplements for Education program, for a workshop for elementary school science teachers. The two sessions of the workshop were held October 24 and November 14, 1992. Eighteen school teachers from central Pennsylvania, grades 1-7, participated in the workshop, for which they received one unit of in-service training credit from their Intermediate Unit. Supplement No. 2 was awarded for additional IUE observations of the Algol stars V342 Aql and TU Mon. Observations of all six candidate stars were made with IUE, and attention was narrowed to TU Mon in particular, for which further IUE observations were made using Director's discretionary time. Observations of TU Mon were also carried out with the Voyager UV spectrometers, and optical spectroscopy was obtained on several occasions at Penn State's Black Moshannon Observatory. Photometric data on TU Mon were acquired by Dr. Paul Etzel at Mt. Laguna Observatory (MLO). McGouldrick was employed part-time during the Fall academic semester to assist in accessing the IUE Archive, and to correlate data on some cataclysmic variables and related objects that were observed with both IUE and the Voyager Far Ultraviolet Spectrometers. Approximately 21 relevant binary systems were observed with the Voyager UVS over the past decade, and a paper is being prepared for eventual publication that will serve as an index to the UVS data archive on these stars, providing observation dates, mean count rates in far and extreme UV bands, and a discussion of the relevant literature concerning the far UV behavior (including correlative IUE information from the archive and the literature). Much of the activity under the grant was in connection with V342 Aquilae, a 3.39 day Algol system thought to be in a state of rapid mass transfer. The goal was to combine optical and ultraviolet data to arrive at a robust, informative interpretation of this unique binary system. Complete orbital phase coverage of V342 Aql was obtained spectroscopically and photometrically.

Link Analysis of High Throughput Spacecraft Communication Systems for Future Science Missions

NASA Technical Reports Server (NTRS)

Simons, Rainee N.

2015-01-01

NASA's plan to launch several spacecrafts into low Earth Orbit (LEO) to support science missions in the next ten years and beyond requires down link throughput on the order of several terabits per day. The ability to handle such a large volume of data far exceeds the capabilities of current systems. This paper proposes two solutions, first, a high data rate link between the LEO spacecraft and ground via relay satellites in geostationary orbit (GEO). Second, a high data rate direct to ground link from LEO. Next, the paper presents results from computer simulations carried out for both types of links taking into consideration spacecraft transmitter frequency, EIRP, and waveform; elevation angle dependent path loss through Earths atmosphere, and ground station receiver GT.

Link Analysis of High Throughput Spacecraft Communication Systems for Future Science Missions

NASA Technical Reports Server (NTRS)

Simons, Rainee N.

2015-01-01

NASA's plan to launch several spacecraft into low Earth Orbit (LEO) to support science missions in the next ten years and beyond requires down link throughput on the order of several terabits per day. The ability to handle such a large volume of data far exceeds the capabilities of current systems. This paper proposes two solutions, first, a high data rate link between the LEO spacecraft and ground via relay satellites in geostationary orbit (GEO). Second, a high data rate direct to ground link from LEO. Next, the paper presents results from computer simulations carried out for both types of links taking into consideration spacecraft transmitter frequency, EIRP, and waveform; elevation angle dependent path loss through Earths atmosphere, and ground station receiver GT.

Effect of fungal mycelia on the HPLC-UV and UV-vis spectrophotometric assessment of mycelium-bound epoxide hydrolase using glycidyl phenyl ether.

PubMed

Dolcet, Marta M; Torres, Mercè; Canela, Ramon

2016-06-25

The use of mycelia as biocatalysts has technical and economic advantages. However, there are several difficulties in obtaining accurate results in mycelium-catalysed reactions. Firstly, sample extraction, indispensable because of the presence of mycelia, can bring into the extract components with a similar structure to that of the analyte of interest; secondly, mycelia can influence the recovery of the analyte. We prepared calibration standards of 3-phenoxy-1,2-propanediol (PPD) in the pure solvent and in the presence of mycelia (spiked before or after extraction) from five fungi (Aspergillus niger, Aspergillus tubingensis, Penicillium aurantiogriseum, Penicillium sp. and Aspergillus terreus). The quantification of PPD was carried out by HPLC-UV and UV-vis spectrophotometry. The manuscript shows that the last method is as accurate as the HPLC method. However, the colorimetric method led to a higher data throughput, which allowed the study of more samples in a shorter time. Matrix effects were evaluated visually from the plotted calibration data and statistically by simultaneously comparing the intercept and slope of calibration curves performed with solvent, post-extraction spiked standards and pre-extraction spiked standards. Significant differences were found between the post- and pre-extraction spiked matrix-matched functions. Pre-extraction spiked matrix-matched functions based on A. tubingensis mycelia, selected as the reference, were validated and used to compensate for low recoveries. These validated functions were successfully applied to the quantification of PPD achieved during the hydrolysis of glycidyl phenyl ether by mycelium-bound epoxide hydrolases and equivalent hydrolysis yields were determined by HPLC-UV and UV-vis spectrophotometry. This study may serve as starting point to implement matrix effects evaluation when mycelium-bound epoxide hydrolases are studied. Copyright © 2016 Elsevier B.V. All rights reserved.

Rolling circle amplification of metazoan mitochondrialgenomes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Simison, W. Brian; Lindberg, D.R.; Boore, J.L.

2005-07-31

Here we report the successful use of rolling circle amplification (RCA) for the amplification of complete metazoan mt genomes to make a product that is amenable to high-throughput genome sequencing techniques. The benefits of RCA over PCR are many and with further development and refinement of RCA, the sequencing of organellar genomics will require far less time and effort than current long PCR approaches.

Inspection of feasible calibration conditions for UV radiometer detectors with the KI/KIO3 actinometer.

PubMed

Qiang, Zhimin; Li, Wentao; Li, Mengkai; Bolton, James R; Qu, Jiuhui

2015-01-01

UV radiometers are widely employed for irradiance measurements, but their periodical calibrations not only induce an extra cost but also are time-consuming. In this study, the KI/KIO3 actinometer was applied to calibrate UV radiometer detectors at 254 nm with a quasi-collimated beam apparatus equipped with a low-pressure UV lamp, and feasible calibration conditions were identified. Results indicate that a washer constraining the UV light was indispensable, while the size (10 or 50 mL) of a beaker containing the actinometer solution had little influence when a proper washer was used. The absorption or reflection of UV light by the internal beaker wall led to an underestimation or overestimation of the irradiance determined by the KI/KIO3 actinometer, respectively. The proper range of the washer internal diameter could be obtained via mathematical analysis. A radiometer with a longer service time showed a greater calibration factor. To minimize the interference from the inner wall reflection of the collimating tube, calibrations should be conducted at positions far enough away from the tube bottom. This study demonstrates that after the feasible calibration conditions are identified, the KI/KIO3 actinometer can be applied readily to calibrate UV radiometer detectors at 254 nm. © 2014 The American Society of Photobiology.

Occupational skin cancer induced by ultraviolet radiation and its prevention.

PubMed

Diepgen, T L; Fartasch, M; Drexler, H; Schmitt, J

2012-08-01

Skin cancer is by far the most common kind of cancer diagnosed in many western countries and ultraviolet radiation is the most important risk factor for cutaneous squamous cell carcinoma (SCC) and basal cell carcinoma (BCC). Although employees at several workplaces are exposed to increased levels of UV radiation, skin cancer due to long-term intense occupational exposure to UV radiation is often not considered as occupational disease. The actually available evidence in the epidemiological literature clearly indicates that occupational UV radiation exposure is a substantial and robust risk factor for the development of cutaneous SCC and also clearly shows a significant risk for developing BCC. There is enough scientific evidence that outdoor workers have an increased risk of developing work-related occupational skin cancer due to natural UV radiation exposure and adequate prevention strategies must be implemented. The three measures which are successful and of particular importance in the prevention of nonmelanoma skin cancer in outdoor workers are changes in behaviour regarding awareness of health and disease resulting from exposure to natural UV radiation, protection from direct UV radiation by wearing suitable clothing, and regular and correct use of appropriate sunscreens. © 2012 The Authors. BJD © 2012 British Association of Dermatologists.

GENEASE: Real time bioinformatics tool for multi-omics and disease ontology exploration, analysis and visualization.

PubMed

Ghandikota, Sudhir; Hershey, Gurjit K Khurana; Mersha, Tesfaye B

2018-03-24

Advances in high-throughput sequencing technologies have made it possible to generate multiple omics data at an unprecedented rate and scale. The accumulation of these omics data far outpaces the rate at which biologists can mine and generate new hypothesis to test experimentally. There is an urgent need to develop a myriad of powerful tools to efficiently and effectively search and filter these resources to address specific post-GWAS functional genomics questions. However, to date, these resources are scattered across several databases and often lack a unified portal for data annotation and analytics. In addition, existing tools to analyze and visualize these databases are highly fragmented, resulting researchers to access multiple applications and manual interventions for each gene or variant in an ad hoc fashion until all the questions are answered. In this study, we present GENEASE, a web-based one-stop bioinformatics tool designed to not only query and explore multi-omics and phenotype databases (e.g., GTEx, ClinVar, dbGaP, GWAS Catalog, ENCODE, Roadmap Epigenomics, KEGG, Reactome, Gene and Phenotype Ontology) in a single web interface but also to perform seamless post genome-wide association downstream functional and overlap analysis for non-coding regulatory variants. GENEASE accesses over 50 different databases in public domain including model organism-specific databases to facilitate gene/variant and disease exploration, enrichment and overlap analysis in real time. It is a user-friendly tool with point-and-click interface containing links for support information including user manual and examples. GENEASE can be accessed freely at http://research.cchmc.org/mershalab/genease_new/login.html. Tesfaye.Mersha@cchmc.org, Sudhir.Ghandikota@cchmc.org. Supplementary data are available at Bioinformatics online.

Solar UV dose patterns in Italy.

PubMed

Meloni, D; Casale, G R; Siani, A M; Palmieri, S; Cappellani, F

2000-06-01

Since 1992 solar ultraviolet (UV) spectral irradiance (290-325 nm) has been measured at two Italian stations of Rome (urban site) and Ispra (semirural site) using Brewer spectrophotometry. The data collected under all sky conditions, are compared with the output of a sophisticated radiative transfer model (System for Transfer of Atmospheric Radiation--STAR model). The STAR multiple scattering scheme is able to cope with all physical processes relevant to the UV transfer through the atmosphere. The experience so far acquired indicates that, in spite of the unavoidable uncertainties in the input parameters (ozone, aerosol, surface albedo, pressure, temperature, relative humidity, cloud cover), measured and computed clear sky iradiances are in reasonable agreement. The STAR model is applied to build up the solar UV geographic patterns in Italy: the daily dose in the range 290-325 nm is computed at about 70 sites where a thorough and homogeneous climatology is available. For each month the concept of an idealized "standard day" is introduced and the surface distribution of solar UV field determined. The map of solar UV patterns for Italy, available for the first time, meets the study requirements in the field of skin and eye epidemiology, as well as in other investigations dealing with the impact of UV on the biosphere. The results are interpreted in terms of atmospheric and meteorological parameters modulating UV radiation reaching the ground.

UV-B induction of the E3 ligase ARIADNE12 depends on CONSTITUTIVELY PHOTOMORPHOGENIC 1

PubMed Central

Xie, Lisi; Lang-Mladek, Christina; Richter, Julia; Nigam, Neha; Hauser, Marie-Theres

2015-01-01

The UV-B inducible ARIADNE12 (ARI12) gene of Arabidopsis thaliana is a member of the RING-between-RING (RBR) family of E3 ubiquitin ligases for which a novel ubiquitination mechanism was identified in mammalian homologs. This RING-HECT hybrid mechanism needs a conserved cysteine which is replaced by serine in ARI12 and might affect the E3 ubiquitin ligase activity. We have shown that under photomorphogenic UV-B, ARI12 is a downstream target of the classical ultraviolet B (UV-B) UV RESISTANCE LOCUS 8 (UVR8) pathway. However, under high fluence rate of UV-B ARI12 was induced independently of UVR8 and the UV-A/blue light and red/far-red photoreceptors. A key component of several light signaling pathways is CONSTITUTIVELY PHOTOMORPHOGENIC 1 (COP1). Upon UV-B COP1 is trapped in the nucleus through interaction with UVR8 permitting the activation of genes that regulate the biosynthesis of UV-B protective metabolites and growth adaptations. To clarify the role of COP1 in the regulation of ARI12 mRNA expression and ARI12 protein stability, localization and interaction with COP1 was assessed with and without UV-B. We found that COP1 controls ARI12 in white light, low and high fluence rate of UV-B. Furthermore we show that ARI12 is indeed an E3 ubiquitin ligase which is mono-ubiquitinated, a prerequisite for the RING-HECT hybrid mechanism. Finally, genetic analyses with transgenes expressing a genomic pmARI12:ARI12-GFP construct confirm the epistatic interaction between COP1 and ARI12 in growth responses to high fluence rate UV-B. PMID:25817546

The UV Imager and its Role in the SMILE Mission

NASA Astrophysics Data System (ADS)

Donovan, E.; Escoubet, C. P.; Branduardi-Raymont, G.; Wang, C.; Hubert, B. A.; Spanswick, E.; Wang, Y.; Raab, W.; Sibeck, D. G.; Sembay, S.; Read, A.; Wielders, A.; Dimmock, A. P.; Romstedt, J.; Loicq, J.

2017-12-01

The upcoming SMILE (Solar wind Magnetosphere Ionosphere Link Explorer) mission promises to revolutionize our understanding of the global geospace and space weather consequences of the Solar Wind Magnetosphere interaction. SMILE will carry four instruments: two in situ instruments which will specify the magnetic field and energetic particles at the spacecraft, an X-ray imager for imaging the magnetopause and cusps, and a UV imager for observing the global (northern hemisphere) auroral oval. The high apogee, which is necessary for obtaining the in situ measurements, presents challenges for the UV imager, but will also support by far the longest duration continuous imaging of the global aurora. As well, inbound and outbound from perigee (for up to 8 hours during each orbit), the UV imager will be able to provide images that will compete with THEMIS-ASI in terms of resolution across an area larger than Canada. In this presentation, we will give an overview of SMILE and its objectives, and an in depth discussion of the UV imager and the role its data will play in the mission science.

Unsupervised Clustering of Subcellular Protein Expression Patterns in High-Throughput Microscopy Images Reveals Protein Complexes and Functional Relationships between Proteins

PubMed Central

Handfield, Louis-François; Chong, Yolanda T.; Simmons, Jibril; Andrews, Brenda J.; Moses, Alan M.

2013-01-01

Protein subcellular localization has been systematically characterized in budding yeast using fluorescently tagged proteins. Based on the fluorescence microscopy images, subcellular localization of many proteins can be classified automatically using supervised machine learning approaches that have been trained to recognize predefined image classes based on statistical features. Here, we present an unsupervised analysis of protein expression patterns in a set of high-resolution, high-throughput microscope images. Our analysis is based on 7 biologically interpretable features which are evaluated on automatically identified cells, and whose cell-stage dependency is captured by a continuous model for cell growth. We show that it is possible to identify most previously identified localization patterns in a cluster analysis based on these features and that similarities between the inferred expression patterns contain more information about protein function than can be explained by a previous manual categorization of subcellular localization. Furthermore, the inferred cell-stage associated to each fluorescence measurement allows us to visualize large groups of proteins entering the bud at specific stages of bud growth. These correspond to proteins localized to organelles, revealing that the organelles must be entering the bud in a stereotypical order. We also identify and organize a smaller group of proteins that show subtle differences in the way they move around the bud during growth. Our results suggest that biologically interpretable features based on explicit models of cell morphology will yield unprecedented power for pattern discovery in high-resolution, high-throughput microscopy images. PMID:23785265

The micro-Petri dish, a million-well growth chip for the culture and high-throughput screening of microorganisms.

PubMed

Ingham, Colin J; Sprenkels, Ad; Bomer, Johan; Molenaar, Douwe; van den Berg, Albert; van Hylckama Vlieg, Johan E T; de Vos, Willem M

2007-11-13

A miniaturized, disposable microbial culture chip has been fabricated by microengineering a highly porous ceramic sheet with up to one million growth compartments. This versatile culture format, with discrete compartments as small as 7 x 7 mum, allowed the growth of segregated microbial samples at an unprecedented density. The chip has been used for four complementary applications in microbiology. (i) As a fast viable counting system that showed a dynamic range of over 10,000, a low degree of bias, and a high culturing efficiency. (ii) In high-throughput screening, with the recovery of 1 fluorescent microcolony in 10,000. (iii) In screening for an enzyme-based, nondominant phenotype by the targeted recovery of Escherichia coli transformed with the plasmid pUC18, based on expression of the lacZ reporter gene without antibiotic-resistance selection. The ease of rapid, successive changes in the environment of the organisms on the chip, needed for detection of beta-galactosidase activity, highlights an advantageous feature that was also used to screen a metagenomic library for the same activity. (iv) In high-throughput screening of >200,000 isolates from Rhine water based on metabolism of a fluorogenic organophosphate compound, resulting in the recovery of 22 microcolonies with the desired phenotype. These isolates were predicted, on the basis of rRNA sequence, to include six new species. These four applications suggest that the potential for such simple, readily manufactured chips to impact microbial culture is extensive and may facilitate the full automation and multiplexing of microbial culturing, screening, counting, and selection.

Transparent Nanopore Cavity Arrays Enable Highly Parallelized Optical Studies of Single Membrane Proteins on Chip.

PubMed

Diederichs, Tim; Nguyen, Quoc Hung; Urban, Michael; Tampé, Robert; Tornow, Marc

2018-06-13

Membrane proteins involved in transport processes are key targets for pharmaceutical research and industry. Despite continuous improvements and new developments in the field of electrical readouts for the analysis of transport kinetics, a well-suited methodology for high-throughput characterization of single transporters with nonionic substrates and slow turnover rates is still lacking. Here, we report on a novel architecture of silicon chips with embedded nanopore microcavities, based on a silicon-on-insulator technology for high-throughput optical readouts. Arrays containing more than 14 000 inverted-pyramidal cavities of 50 femtoliter volumes and 80 nm circular pore openings were constructed via high-resolution electron-beam lithography in combination with reactive ion etching and anisotropic wet etching. These cavities feature both, an optically transparent bottom and top cap. Atomic force microscopy analysis reveals an overall extremely smooth chip surface, particularly in the vicinity of the nanopores, which exhibits well-defined edges. Our unprecedented transparent chip design provides parallel and independent fluorescent readout of both cavities and buffer reservoir for unbiased single-transporter recordings. Spreading of large unilamellar vesicles with efficiencies up to 96% created nanopore-supported lipid bilayers, which are stable for more than 1 day. A high lipid mobility in the supported membrane was determined by fluorescent recovery after photobleaching. Flux kinetics of α-hemolysin were characterized at single-pore resolution with a rate constant of 0.96 ± 0.06 × 10 -3 s -1 . Here, we deliver an ideal chip platform for pharmaceutical research, which features high parallelism and throughput, synergistically combined with single-transporter resolution.

Target of Opportunity - Far-UV Observations of Comet ISON with FORTIS

NASA Astrophysics Data System (ADS)

McCandliss, Stephan

The goal of this one year program is to acquire spectra and imagery of the sungrazing Oort cloud comet known as ISON in the far-UV bandpass between 800 -- 1950 Angstroms over a 1/2 degree field-of-view (FOV), during its ingress and egress from the sun. This bandpass and FOV provides access to a particularly rich set of spectral diagnostics for determining the volatile production rates of CO, H, C, C+, O and S, and to search for previously undetected atomic and molecular species such as Ar, N, N+, N2, O+ and O5+. We are particularly interested in searching for compositional changes associated with the intense heating episode at the comet's perihelion to address an outstanding question in cometary research; do Oort cloud comets carry a chemical composition similar to the proto-stellar molecular cloud from which the Solar System formed? Sounding rockets are uniquely suited to observing cometary emissions in the far-UV as they can point to within 25 degrees of the sun, whereas HST is limited to observations at angles greater than 50 degrees. The projected ephemeris of this comet shows that on ingress it is expected to reach ~ +4 mag at 25 degrees from the sun on 21 November 2013 and, should it survive its trip to within 2.7 Rsun from the sun, it is expected to reach a similar magnitude during egress at 25 degrees on 08 December 2013. This will be a reflight of the JHU sounding rocket borne spectro-telescope called FORTIS, currently scheduled to fly in May of 2013 on NASA sounding rocket 36.268 UG. The instrumental configuration of FORTIS is uniquely suited to accomplishing the goals of this task.

Interaction between two discontiguous chain segments from the beta-sheet of Escherichia coli thioredoxin suggests an initiation site for folding.

PubMed

Tasayco, M L; Fuchs, J; Yang, X M; Dyalram, D; Georgescu, R E

2000-09-05

The approach of comparing folding and folding/binding processes is exquisitely poised to narrow down the regions of the sequence that drive protein folding. We have dissected the small single alpha/beta domain of oxidized Escherichia coli thioredoxin (Trx) into three complementary fragments (N, residues 1-37; M, residues 38-73; and C, residues 74-108) to study them in isolation and upon recombination by far-UV CD and NMR spectroscopy. The isolated fragments show a minimum of ellipticity of ca. 197 nm in their far-UV CD spectra without concentration dependence, chemical shifts of H(alpha) that are close to the random coil values, and no medium- and long-range NOE connectivities in their three-dimensional NMR spectra. These fragments behave as disordered monomers. Only the far-UV CD spectra of binary or ternary mixtures that contain N- and C-fragments are different from the sum of their individual spectra, which is indicative of folding and/or binding of these fragments. Indeed, the cross-peaks corresponding to the rather hydrophobic beta(2) and beta(4) regions of the beta-sheet of Trx disappear from the (1)H-(15)N HSQC spectra of isolated labeled N- and C-fragments, respectively, upon addition of the unlabeled complementary fragments. The disappearing cross-peaks indicate interactions between the beta(2) and beta(4) regions, and their reappearance at lower temperatures indicates unfolding and/or dissociation of heteromers that are predominantly held by hydrophobic forces. Our results argue that the folding of Trx begins by zippering two discontiguous and rather hydrophobic chain segments (beta(2) and beta(4)) corresponding to neighboring strands of the native beta-sheet.

An Ultraviolet Investigation of Activity on Exoplanet Host Stars

NASA Astrophysics Data System (ADS)

Shkolnik, Evgenya L.

2013-03-01

Using the far-UV (FUV) and near-UV (NUV) photometry from the NASA Galaxy Evolution Explorer (GALEX), we searched for evidence of increased stellar activity due to tidal and/or magnetic star-planet interactions (SPI) in the 272 known FGK planetary hosts observed by GALEX. With the increased sensitivity of GALEX, we are able probe systems with lower activity levels and at larger distances than what has been done to date with X-ray satellites. We compared samples of stars with close-in planets (a < 0.1 AU) to those with far-out planets (a > 0.5 AU) and looked for correlations of excess activity with other system parameters. This statistical investigation found no clear correlations with a, Mp , or Mp /a, in contrast to some X-ray and Ca II studies. However, there is tentative evidence (at a level of 1.8σ) that stars with radial-velocity-(RV)-detected close-in planets are more FUV-active than stars with far-out planets, in agreement with several published X-ray and Ca II results. The case is strengthened to a level of significance to 2.3σ when transit-detected close-in planets are included. This is most likely because the RV-selected sample of stars is significantly less active than the field population of comparable stars, while the transit-selected sample is similarly active. Given the factor of 2-3 scatter in fractional FUV luminosity for a given stellar effective temperature, it is necessary to conduct a time-resolved study of the planet hosts in order to better characterize their UV variability and generate a firmer statistical result. Based on observations made with the NASA Galaxy Evolution Explorer. GALEX is operated for NASA by the California Institute of Technology under NASA contract NAS5-98034.

Mid- and far-infrared spectroscopic studies of the influence of temperature, ultraviolet photolysis and ion irradiation on cosmic-type ices.

PubMed

Moore, M H; Hudson, R L; Gerakines, P A

2001-03-15

Infrared (IR) studies of laboratory ices can provide information on the evolution of cosmic-type ices as a function of different simulated space environments involving thermal, ultraviolet (UV), or ion processing. Laboratory radiation experiments can lead to the formation of complex organic molecules. However, because of our lack of knowledge about UV photon and ion fluxes, and exposure lifetimes, it is not certain how well our simulations represent space conditions. Appropriate laboratory experiments are also limited by the absence of knowledge about the composition, density, and temperature of ices in different regions of space. Our current understanding of expected doses due to UV photons and cosmic rays is summarized here, along with an inventory of condensed-phase molecules identified on outer solar system surfaces, comets and interstellar grains. Far-IR spectra of thermally cycled H2O are discussed since these results reflect the dramatic difference between the amorphous and crystalline phases of H2O ice, the most dominant condensed-phase molecule in cosmic ices. A comparison of mid-IR spectra of products in proton-irradiated and UV-photolyzed ices shows that few differences are observed for these two forms of processing for the simple binary mixtures studied to date. IR identification of radiation products and experiments to determine production rates of new molecules in ices during processing are discussed. A new technique for measuring intrinsic IR band strengths of several unstable molecules is presented. An example of our laboratory results applied to Europa observations is included.

Understanding Systematics in ZZ Ceti Model Fitting to Enable Differential Seismology

NASA Astrophysics Data System (ADS)

Fuchs, J. T.; Dunlap, B. H.; Clemens, J. C.; Meza, J. A.; Dennihy, E.; Koester, D.

2017-03-01

We are conducting a large spectroscopic survey of over 130 Southern ZZ Cetis with the Goodman Spectrograph on the SOAR Telescope. Because it employs a single instrument with high UV throughput, this survey will both improve the signal-to-noise of the sample of SDSS ZZ Cetis and provide a uniform dataset for model comparison. We are paying special attention to systematics in the spectral fitting and quantify three of those systematics here. We show that relative positions in the log g -Teff plane are consistent for these three systematics.

High-throughput sequencing reveals unprecedented diversities of Aspergillus species in outdoor air.

PubMed

Lee, S; An, C; Xu, S; Lee, S; Yamamoto, N

2016-09-01

This study used the Illumina MiSeq to analyse compositions and diversities of Aspergillus species in outdoor air. The seasonal air samplings were performed at two locations in Seoul, South Korea. The results showed the relative abundances of all Aspergillus species combined ranging from 0·20 to 18% and from 0·19 to 21% based on the number of the internal transcribed spacer 1 (ITS1) and β-tubulin (BenA) gene sequences respectively. Aspergillus fumigatus was the most dominant species with the mean relative abundances of 1·2 and 5·5% based on the number of the ITS1 and BenA sequences respectively. A total of 29 Aspergillus species were detected and identified down to the species rank, among which nine species were known opportunistic pathogens. Remarkably, eight of the nine pathogenic species were detected by either one of the two markers, suggesting the need of using multiple markers and/or primer pairs when the assessments are made based on the high-throughput sequencing. Due to diversity of species within the genus Aspergillus, the high-throughput sequencing was useful to characterize their compositions and diversities in outdoor air, which are thought to be difficult to be accurately characterized by conventional culture and/or Sanger sequencing-based techniques. Aspergillus is a diverse genus of fungi with more than 300 species reported in literature. Aspergillus is important since some species are known allergens and opportunistic human pathogens. Traditionally, growth-dependent methods have been used to detect Aspergillus species in air. However, these methods are limited in the number of isolates that can be analysed for their identities, resulting in inaccurate characterizations of Aspergillus diversities. This study used the high-throughput sequencing to explore Aspergillus diversities in outdoor, which are thought to be difficult to be accurately characterized by traditional growth-dependent techniques. © 2016 The Society for Applied Microbiology.

A Primer on High-Throughput Computing for Genomic Selection

PubMed Central

Wu, Xiao-Lin; Beissinger, Timothy M.; Bauck, Stewart; Woodward, Brent; Rosa, Guilherme J. M.; Weigel, Kent A.; Gatti, Natalia de Leon; Gianola, Daniel

2011-01-01

High-throughput computing (HTC) uses computer clusters to solve advanced computational problems, with the goal of accomplishing high-throughput over relatively long periods of time. In genomic selection, for example, a set of markers covering the entire genome is used to train a model based on known data, and the resulting model is used to predict the genetic merit of selection candidates. Sophisticated models are very computationally demanding and, with several traits to be evaluated sequentially, computing time is long, and output is low. In this paper, we present scenarios and basic principles of how HTC can be used in genomic selection, implemented using various techniques from simple batch processing to pipelining in distributed computer clusters. Various scripting languages, such as shell scripting, Perl, and R, are also very useful to devise pipelines. By pipelining, we can reduce total computing time and consequently increase throughput. In comparison to the traditional data processing pipeline residing on the central processors, performing general-purpose computation on a graphics processing unit provide a new-generation approach to massive parallel computing in genomic selection. While the concept of HTC may still be new to many researchers in animal breeding, plant breeding, and genetics, HTC infrastructures have already been built in many institutions, such as the University of Wisconsin–Madison, which can be leveraged for genomic selection, in terms of central processing unit capacity, network connectivity, storage availability, and middleware connectivity. Exploring existing HTC infrastructures as well as general-purpose computing environments will further expand our capability to meet increasing computing demands posed by unprecedented genomic data that we have today. We anticipate that HTC will impact genomic selection via better statistical models, faster solutions, and more competitive products (e.g., from design of marker panels to realized genetic gain). Eventually, HTC may change our view of data analysis as well as decision-making in the post-genomic era of selection programs in animals and plants, or in the study of complex diseases in humans. PMID:22303303

Spectroscopic Characterization of a Newborn Neptune-Sized Planet

NASA Astrophysics Data System (ADS)

Benneke, Bjoern

2016-10-01

The study of planet formation as it occurs has remained an elusive frontier, until now. Our team recently identified a newly-born planet orbiting a young, 5-10 Myr old, pre-main-sequence M star in the Upper Scorpius star-forming region. In its early stage, the close-in planet is about 50% larger than Neptune. Models predict that it will contract over the coming 100-1000 Myr to become a member of the intriguingly abundant class of close-in sub-Neptunes. Spectroscopic observations of this newborn planet will give us the unprecedented opportunity to probe the formation and evolution of low-mass, close-in planets at this early stage. Here, we propose to a reconnaissance study to probe the adolescent state of the gravitationally-bound atmosphere using near-infrared transit spectroscopy and the planet's hydrogen loss rate using far-UV transit spectroscopy. Together, our observations will give us unparalleled insights into the initial state of a young close-in planet as well as into the competing timescales of Kelvin-Helmholtz contraction and envelope mass-loss involved in the early evolution of close-in sub-Neptunes and Neptunes. If the proposed reconnaissance observations detect that molecular absorption in the atmosphere of USco 1610-1919b, then USco 1610-1919b will be one of the prime targets for the 200-hour JWST/NIRISS GTO program to probe the formation and evolution of exoplanets. Mid-cycle observations are required because the final target list for JWST/GTO programs must be locked in by June 2017 before the beginning of HST Cycle 25.

Deep-UV-sensitive high-frame-rate backside-illuminated CCD camera developments

NASA Astrophysics Data System (ADS)

Dawson, Robin M.; Andreas, Robert; Andrews, James T.; Bhaskaran, Mahalingham; Farkas, Robert; Furst, David; Gershstein, Sergey; Grygon, Mark S.; Levine, Peter A.; Meray, Grazyna M.; O'Neal, Michael; Perna, Steve N.; Proefrock, Donald; Reale, Michael; Soydan, Ramazan; Sudol, Thomas M.; Swain, Pradyumna K.; Tower, John R.; Zanzucchi, Pete

2002-04-01

New applications for ultra-violet imaging are emerging in the fields of drug discovery and industrial inspection. High throughput is critical for these applications where millions of drug combinations are analyzed in secondary screenings or high rate inspection of small feature sizes over large areas is required. Sarnoff demonstrated in1990 a back illuminated, 1024 X 1024, 18 um pixel, split-frame-transfer device running at > 150 frames per second with high sensitivity in the visible spectrum. Sarnoff designed, fabricated and delivered cameras based on these CCDs and is now extending this technology to devices with higher pixel counts and higher frame rates through CCD architectural enhancements. The high sensitivities obtained in the visible spectrum are being pushed into the deep UV to support these new medical and industrial inspection applications. Sarnoff has achieved measured quantum efficiencies > 55% at 193 nm, rising to 65% at 300 nm, and remaining almost constant out to 750 nm. Optimization of the sensitivity is being pursued to tailor the quantum efficiency for particular wavelengths. Characteristics of these high frame rate CCDs and cameras will be described and results will be presented demonstrating high UV sensitivity down to 150 nm.

Role of cloned carotenoid genes expressed in Escherichia coli in protecting against inactivation by near-UV light and specific phototoxic molecules

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tuveson, R.W.; Larson, R.A.; Kagan, J.

1988-10-01

Genes controlling carotenoid synthesis were cloned from Erwinia herbicola and expressed in an Escherichia coli strain. Carotenoids protect against high fluences of near-UV (NUV; 320 to 400 nm) but not against far-UV (200-300 nm). Protection of E. coli cells was not observed following treatment with either psoralen or 8-methoxypsoralen plus NUV. However, significant protection of cells producing carotenoids was observed with three photosensitizing molecules activated by NUV (alpha-terthienyl, harmine, and phenylheptatriyne) which are thought to have the membrane as an important lethal target. Protection of carotenoid-producing cells against inactivation was not observed with acridine orange plus visible light but wasmore » seen with toluidine blue O plus visible light.« less

EXPERIMENT - APOLLO 16 (UV)

NASA Image and Video Library

1972-06-06

S72-40821 (21 April 1972) --- An artificially reproduced color enhancement of a ten-minute far-ultraviolet exposure of Earth, taken with a filter which blocks the glow caused by atomic hydrogen but which transmits the glow caused by atomic oxygen and molecular nitrogen. Note that airglow emission bands are visible on the night side of Earth, one roughly centered between the two polar auroral zones and one at an angle to this extending northward toward the sunlit side of Earth. The UV camera was operated by astronaut John W. Young on the Apollo 16 lunar landing mission. It was designed and built at the Naval Research Laboratory, Washington, D.C. EDITOR'S NOTE: The photographic number of the original black & white UV camera photograph, from which this artificially reproduced version was made, is AS16-123-19657.

Analysis of macamides in samples of Maca (Lepidium meyenii) by HPLC-UV-MS/MS.

PubMed

McCollom, Megan M; Villinski, Jacquelyn R; McPhail, Kerry L; Craker, Lyle E; Gafner, Stefan

2005-01-01

The macamides are a distinct class of secondary metabolites that have so far been found only in Lepidium meyenii Walp. (Maca). Using HPLC-UV-MS/MS, the main macamides have been identified as n-benzylhexadecanamide, n-benzyl-(9Z)-octadecenamide, n-benzyl-(9Z, 12Z)-octadecadienamide, n-benzyl-(9Z, 12Z, 15Z)-octadecatrienamide and n-benzyloctadecanamide. The identities of n-benzyl-(9Z)-octadecenamide and n-benzyl-(9Z, 12Z)-octadecadienamide were confirmed by comparison of chromatographic and spectral properties with synthetic analogues. Total macamides have been quantified by HPLC-UV in plant material from different vendors using n-benzylhexadecanamide as an external standard. The amount of macamides in the dried plant material ranged from 0.0016 to 0.0123%.

Near-simultaneous ultraviolet and optical spectrophotometry of T Tauri stars

NASA Technical Reports Server (NTRS)

Goodrich, Robert W.; Herbig, G. H.

1986-01-01

A set of near-simultaneous ultraviolet and optical spectra and UBVR(J)I(J) photometry of five T Tauri stars has been analyzed for the shape of the energy distribution shortward of 3000 A. The far-ultraviolet continua of these stars are very much stronger than the level of light scattered from longer wavelengths in the IUE spectrograph. The results, expressed as two-color plots, show that the UV colors of T Tauri stars differ significantly from those expected from their optical spectral types. Although these particular K-type T Tauri stars are not extreme members of the class, they have the UV colors of A stars. The spectral shape of this UV excess is approximately that expected from published chromospheric models of T Tauri stars.

Role of cloned carotenoid genes expressed in Escherichia coli in protecting against inactivation by near-UV light and specific phototoxic molecules.

PubMed Central

Tuveson, R W; Larson, R A; Kagan, J

1988-01-01

Genes controlling carotenoid synthesis were cloned from Erwinia herbicola and expressed in an Escherichia coli strain. Carotenoids protect against high fluences of near-UV (NUV; 320 to 400 nm) but not against far-UV (200-300 nm). Protection of E. coli cells was not observed following treatment with either psoralen or 8-methoxypsoralen plus NUV. However, significant protection of cells producing carotenoids was observed with three photosensitizing molecules activated by NUV (alpha-terthienyl, harmine, and phenylheptatriyne) which are thought to have the membrane as an important lethal target. Protection of carotenoid-producing cells against inactivation was not observed with acridine orange plus visible light but was seen with toluidine blue O plus visible light. PMID:3049544

Feedback and Feeding in the Context of Galaxy Evolution with SPICA: Direct Characterisation of Molecular Outflows and Inflows

NASA Astrophysics Data System (ADS)

González-Alfonso, E.; Armus, L.; Carrera, F. J.; Charmandaris, V.; Efstathiou, A.; Egami, E.; Fernández-Ontiveros, J. A.; Fischer, J.; Granato, G. L.; Gruppioni, C.; Hatziminaoglou, E.; Imanishi, M.; Isobe, N.; Kaneda, H.; Koziel-Wierzbowska, D.; Malkan, M. A.; Martín-Pintado, J.; Mateos, S.; Matsuhara, H.; Miniutti, G.; Nakagawa, T.; Pozzi, F.; Rico-Villas, F.; Rodighiero, G.; Roelfsema, P.; Spinoglio, L.; Spoon, H. W. W.; Sturm, E.; van der Tak, F.; Vignali, C.; Wang, L.

2017-11-01

A far-infrared observatory such as the SPace Infrared telescope for Cosmology and Astrophysics, with its unprecedented spectroscopic sensitivity, would unveil the role of feedback in galaxy evolution during the last 10 Gyr of the Universe (z = 1.5-2), through the use of far- and mid-infrared molecular and ionic fine structure lines that trace outflowing and infalling gas. Outflowing gas is identified in the far-infrared through P-Cygni line shapes and absorption blueshifted wings in molecular lines with high dipolar moments, and through emission line wings of fine-structure lines of ionised gas. We quantify the detectability of galaxy-scale massive molecular and ionised outflows as a function of redshift in AGN-dominated, starburst-dominated, and main-sequence galaxies, explore the detectability of metal-rich inflows in the local Universe, and describe the most significant synergies with other current and future observatories that will measure feedback in galaxies via complementary tracers at other wavelengths.

Vacuum ultraviolet imagery of the Virgo Cluster region. II - Total far-ultraviolet flux of galaxies

NASA Astrophysics Data System (ADS)

Kodaira, K.; Watanabe, T.; Onaka, T.; Tanaka, W.

1990-11-01

The total flux in the far-ultraviolet region around 150 nm was measured for more than 40 galaxies in the central region of the Virgo Cluster, using two imaging telescopes on board a sounding rocket. The observed far-ultraviolet flux shows positive correlations with the H I 21 cm flux and the far-infrared flux for spiral galaxies, and with the X-ray flux and the radio continuum flux for elliptical galaxies. The former correlations of spiral galaxies are interpreted in terms of star formation activity, which indicates substantial depletion in the Virgo galaxies in accordance with the H I stripping. The latter correlations of elliptical galaxies indicate possible far-ultraviolet sources of young population, in addition to evolved hot stars. Far-ultraviolet fluxes from two dwarf elliptical galaxies were obtained tentatively, indicating star formation activity in elliptical galaxies. A high-resolution UV imagery by HST would be effective to distinguish the young population and the old population in elliptical galaxies.

Changes in the ultraviolet spectrum of EG Andromedae

NASA Technical Reports Server (NTRS)

Stencel, R. E.

1984-01-01

Ultraviolet observations of EG Andromedae, a symbiotic star, are reported which clearly show pronounced eclipse-like effects on the high-temperature far-UV continuum. Continuum and emission-line variations with phase are reported and related to synoptic hydrogen alpha data. System parameters are characterized.

Far-UV, visible, and near-IR reflectance spectra of frosts of H2O, CO2, NH3 and SO2

NASA Technical Reports Server (NTRS)

Hapke, B.; Wells, E.; Wagner, J.; Partlow, W.

1981-01-01

Measurements in the 0.1-2.5 micron range are presented for the reflectance spectra of the frosts of several volatiles pertinent to the study of comet nuclei. The frost spectra have distinctive features permitting their identification by spectroscopic reflectance remote sensing, notably in the far UV. It is found that: (1) H2O has a minimum at 0.16 microns and a maximum at 0.13 microns; (2) CO2 has minima near 0.21, 0.18 and 0.125 microns, with maxima at 0.19, 0.135 and 0.120 microns; (3) NH3 is bright at wavelengths longer than 0.21 microns, where reflectance drops to a value of only a few per cent at shorter wavelengths; (4) SO2 has a sharp drop at 0.32 microns, with a minimum at 0.18 microns and a maximum at 0.13 microns. The features in the frost spectra largely correspond to absorption line bands in the gas phase.

Fall Meeting science covered widely in news and social media

NASA Astrophysics Data System (ADS)

Weiss, Peter

2012-02-01

Journalists found a lot to report about at the 2011 Fall Meeting, which has so far generated about 1800 stories in news outlets worldwide. More than 135 reporters covered the meeting, representing a broad range of print, online, and broadcast news sources in the United States, Europe, and Japan. To assist those reporters, AGU staff conducted and Web-streamed an unprecedented 25 press events at the meeting—mostly press conferences bringing together scientists presenting newsworthy fndings and journalists eager for stories.

Transformation efficiency and formation of transformation products during photochemical degradation of TCE and PCE at micromolar concentrations

PubMed Central

2014-01-01

Background Trichloroethene and tetrachloroethene are the most common pollutants in groundwater and two of the priority pollutants listed by the U.S. Environmental Protection Agency. In previous studies on TCE and PCE photolysis and photochemical degradation, concentration ranges exceeding environmental levels by far with millimolar concentrations of TCE and PCE have been used, and it is not clear if the obtained results can be used to explain the degradation of these contaminants at more realistic environmental concentration levels. Methods Experiments with micromolar concentrations of TCE and PCE in aqueous solution using direct photolysis and UV/H2O2 have been conducted and product formation as well as transformation efficiency have been investigated. SPME/GC/MS, HPLC/UV and ion chromatography with conductivity detection have been used to determine intermediates of degradation. Results The results showed that chloride was a major end product in both TCE and PCE photodegradation. Several intermediates such as formic acid, dichloroacetic acid, dichloroacetaldehyede, chloroform, formaldehyde and glyoxylic acid were formed during both, UV and UV/H2O2 treatment of TCE. However chloroacetaldehyde and chloroacetic acid were only detected during direct UV photolysis of TCE and oxalic acid was only formed during the UV/H2O2 process. For PCE photodegradation, formic acid, di- and trichloroacetic acids were detected in both UV and UV/H2O2 systems, but formaldehyde and glyoxylic acid were only detected during direct UV photolysis. Conclusions For water treatment UV/H2O2 seems to be favorable over direct UV photolysis because of its higher degradation efficiency and lower risk for the formation of harmful intermediates. PMID:24401763

Transformation efficiency and formation of transformation products during photochemical degradation of TCE and PCE at micromolar concentrations.

PubMed

Dobaradaran, Sina; Lutze, Holger; Mahvi, Amir Hossein; Schmidt, Torsten C

2014-01-08

Trichloroethene and tetrachloroethene are the most common pollutants in groundwater and two of the priority pollutants listed by the U.S. Environmental Protection Agency. In previous studies on TCE and PCE photolysis and photochemical degradation, concentration ranges exceeding environmental levels by far with millimolar concentrations of TCE and PCE have been used, and it is not clear if the obtained results can be used to explain the degradation of these contaminants at more realistic environmental concentration levels. Experiments with micromolar concentrations of TCE and PCE in aqueous solution using direct photolysis and UV/H2O2 have been conducted and product formation as well as transformation efficiency have been investigated. SPME/GC/MS, HPLC/UV and ion chromatography with conductivity detection have been used to determine intermediates of degradation. The results showed that chloride was a major end product in both TCE and PCE photodegradation. Several intermediates such as formic acid, dichloroacetic acid, dichloroacetaldehyede, chloroform, formaldehyde and glyoxylic acid were formed during both, UV and UV/H2O2 treatment of TCE. However chloroacetaldehyde and chloroacetic acid were only detected during direct UV photolysis of TCE and oxalic acid was only formed during the UV/H2O2 process. For PCE photodegradation, formic acid, di- and trichloroacetic acids were detected in both UV and UV/H2O2 systems, but formaldehyde and glyoxylic acid were only detected during direct UV photolysis. For water treatment UV/H2O2 seems to be favorable over direct UV photolysis because of its higher degradation efficiency and lower risk for the formation of harmful intermediates.

Simulations of dust in interacting galaxies

NASA Astrophysics Data System (ADS)

Jonsson, Patrik

This dissertation studies the effects of dust in N-body simulations of interacting galaxies. A new Monte-Carlo radiative-transfer code, Sunrise , is used in conjunction with hydrodynamic simulations. Results from radiative- transfer calculations in over 20 SPH simulations of disk-galaxy major mergers (Cox, 2004) are presented. Dust has a profound effect on the appearance of these simulations. At peak luminosities, 90% of the bolometric luminosity is absorbed by dust. The dust obscuration increases with luminosity in such a way that the brightness at UV/ visual wavelengths remains roughly constant. A general relationship between the fraction of energy absorbed and the ratio of bolometric luminosity to baryonic mass is found to hold in galaxies with metallicities >0.7 [Special characters omitted.] over a factor of 50 in mass. The accuracy to which the simulations describe observed starburst galaxies is evaluated by comparing them to observations by Meurer et al. (1999) and Heckman et al. (1998). The simulations are found to follow a relation similar to the IRX-b relation found by Meurer et al. (1999) when similar luminosity objects are considered. The highest-luminosity simulated galaxies depart from this relation and occupy the region where local LIRGs/ULIRGs are found. Comparing to the Heckman et al. (1998) sample, the simulations are found to obey the same relations between UV luminosity, UV color, IR luminosity, absolute blue magnitude and metallicity as the observations. This agreement is contingent on the presence of a realistic mass-metallicity relation, and Milky-Way-like dust. SMC-like dust results in far too red a UV continuum slope. On the whole, the agreement between the simulated and observed galaxies is impressive considering that the simulations have not been fit to agree with the observations, and we conclude that the simulations provide a realistic replication of the real universe. The simulations are used to study the performance of star-formation indicators in the presence of dust. The far-infrared luminosity is found to be reliable. In contrast, the Ha and far-ultraviolet luminosities suffer severely from dust attenuation, and dust corrections can only partially remedy the situation.

NanoTopoChip: High-throughput nanotopographical cell instruction.

PubMed

Hulshof, Frits F B; Zhao, Yiping; Vasilevich, Aliaksei; Beijer, Nick R M; de Boer, Meint; Papenburg, Bernke J; van Blitterswijk, Clemens; Stamatialis, Dimitrios; de Boer, Jan

2017-10-15

Surface topography is able to influence cell phenotype in numerous ways and offers opportunities to manipulate cells and tissues. In this work, we develop the Nano-TopoChip and study the cell instructive effects of nanoscale topographies. A combination of deep UV projection lithography and conventional lithography was used to fabricate a library of more than 1200 different defined nanotopographies. To illustrate the cell instructive effects of nanotopography, actin-RFP labeled U2OS osteosarcoma cells were cultured and imaged on the Nano-TopoChip. Automated image analysis shows that of many cell morphological parameters, cell spreading, cell orientation and actin morphology are mostly affected by the nanotopographies. Additionally, by using modeling, the changes of cell morphological parameters could by predicted by several feature shape parameters such as lateral size and spacing. This work overcomes the technological challenges of fabricating high quality defined nanoscale features on unprecedented large surface areas of a material relevant for tissue culture such as PS and the screening system is able to infer nanotopography - cell morphological parameter relationships. Our screening platform provides opportunities to identify and study the effect of nanotopography with beneficial properties for the culture of various cell types. The nanotopography of biomaterial surfaces can be modified to influence adhering cells with the aim to improve the performance of medical implants and tissue culture substrates. However, the necessary knowledge of the underlying mechanisms remains incomplete. One reason for this is the limited availability of high-resolution nanotopographies on relevant biomaterials, suitable to conduct systematic biological studies. The present study shows the fabrication of a library of nano-sized surface topographies with high fidelity. The potential of this library, called the 'NanoTopoChip' is shown in a proof of principle HTS study which demonstrates how cells are affected by nanotopographies. The large dataset, acquired by quantitative high-content imaging, allowed us to use predictive modeling to describe how feature dimensions affect cell morphology. Copyright © 2017 Acta Materialia Inc. Published by Elsevier Ltd. All rights reserved.

207-nm UV light - a promising tool for safe low-cost reduction of surgical site infections. I: in vitro studies.

PubMed

Buonanno, Manuela; Randers-Pehrson, Gerhard; Bigelow, Alan W; Trivedi, Sheetal; Lowy, Franklin D; Spotnitz, Henry M; Hammer, Scott M; Brenner, David J

2013-01-01

0.5% to 10% of clean surgeries result in surgical-site infections, and attempts to reduce this rate have had limited success. Germicidal UV lamps, with a broad wavelength spectrum from 200 to 400 nm are an effective bactericidal option against drug-resistant and drug-sensitive bacteria, but represent a health hazard to patient and staff. By contrast, because of its limited penetration, ~200 nm far-UVC light is predicted to be effective in killing bacteria, but without the human health hazards to skin and eyes associated with conventional germicidal UV exposure. The aim of this work was to test the biophysically-based hypothesis that ~200 nm UV light is significantly cytotoxic to bacteria, but minimally cytotoxic or mutagenic to human cells either isolated or within tissues. A Kr-Br excimer lamp was used, which produces 207-nm UV light, with a filter to remove higher-wavelength components. Comparisons were made with results from a conventional broad spectrum 254-nm UV germicidal lamp. First, cell inactivation vs. UV fluence data were generated for methicillin-resistant S. aureus (MRSA) bacteria and also for normal human fibroblasts. Second, yields of the main UV-associated pre-mutagenic DNA lesions (cyclobutane pyrimidine dimers and 6-4 photoproducts) were measured, for both UV radiations incident on 3-D human skin tissue. We found that 207-nm UV light kills MRSA efficiently but, unlike conventional germicidal UV lamps, produces little cell killing in human cells. In a 3-D human skin model, 207-nm UV light produced almost no pre-mutagenic UV-associated DNA lesions, in contrast to significant yields induced by a conventional germicidal UV lamp. As predicted based on biophysical considerations, 207-nm light kills bacteria efficiently but does not appear to be significantly cytotoxic or mutagenic to human cells. Used appropriately, 207-nm light may have the potential for safely and inexpensively reducing surgical-site infection rates, including those of drug-resistant origin.

Far-Infrared and Nebular Star-Formation Rate of Dusty Star Forming Galaxies from Herschel, CANDELS and 3D-HST at z~1

NASA Astrophysics Data System (ADS)

Hasan, Farhanul; Nayyeri, Hooshang; Cooray, Asantha R.; Herschel Group: University of California Irvine. Dept. of Physics & Astronomy. Led by professor Asantha Cooray, Reed College Undergraduate Research Committee

2017-06-01

We present a combined Herschel/PACS and SPIRE and HST/WFC3 observations of the five CANDELS fields, EGS, GOODS-N, GOODS-S, COSMOS and UDS, to study star-formation activity in dusty star-forming galaxies (DSFGs) at z~1. We use 3D-HST photometry and Grism spectroscopic redshifts to construct the Spectral Energy Distributions (SED) of galaxies in the near UV, optical and near infrared, along with IRAC measurements at 3.6-8 μm in the mid-infrared, and Herschel data at 250-500 μm in the far-infrared. The 3D-HST grism line measurements are used to estimate the star-formation rate from nebular emission. In particular, we compare the H-alpha measured SFRs (corrected for attenuation) to that of direct observations of the far-infrared from Herschel. We further look at the infrared excess in this sample of dusty star-forming galaxies (denoted by LIR/LUV) as a function of the UV slope. We find that the population of high-z DSFGs sit above the trend expected for normal star-forming galaxies. Additionally, we study the dependence of SFR on total dust attenuation and confirm a strong correlation between SFR(Ha) and the balmer decrement (Hα/Hβ).

Synthesis and high-throughput processing of polymeric hydrogels for 3D cell culture.

PubMed

Lowe, Stuart B; Tan, Vincent T G; Soeriyadi, Alexander H; Davis, Thomas P; Gooding, J Justin

2014-09-17

3D cell cultures have drawn a large amount of interest in the scientific community with their ability to closely mimic physiological conditions. Hydrogels have been used extensively in the development of extracellular matrix (ECM) mimics for 3D cell culture. Compounds such as collagen and fibrin are commonly used to synthesize natural ECM mimics; however they suffer from batch-to-batch variation. In this Review we explore the synthesis route of hydrogels; how they can be altered to give different chemical and physical properties; how different biomolecules such as arginylglycylaspartic acid (RGD) or vascular endothelial growth factor (VEGF) can be incorporated to give different biological cues; and how to create concentration gradients with UV light. There will also be emphasis on the types of techniques available in high-throughput processing such as nozzle and droplet-based biofabrication, photoenabled biofabrication, and microfluidics. The combination of these approaches and techniques allow the preparation of hydrogels which are capable of mimicking the ECM.

UIT: Ultraviolet surface photometry of the spiral galaxy M74 (NGC 628)

NASA Technical Reports Server (NTRS)

Cornett, Robert H.; O'Connell, Robert W.; Greason, Michael R.; Offenberg, Joel D.; Angione, Ronald J.; Bohlin, Ralph C.; Cheng, K. P.; Roberts, Morton S.; Smith, Andrew M.; Smith, Eric P.

1994-01-01

Ultraviolet photometry, obtained from Ultraviolet Imaging Telescope (UIT) images at 1520 A (far-UV; magnitudes m(152)) and 2490 A (near-UV; magnitudes m(249)), of the spiral galaxy M74 (NGC 628) is compared with H-alpha, R, V, and B surface photometry and with models. M74's surface brightness profiles have a central peak with an exponential falloff; the exponential scale lengths of the profiles increase with decreasing wavelength for the broad-band images. The slope of the continuum-subtracted H-alpha profile is intermediate between those of far-UV and near-UV profiles, consistent with the related origins of H-alpha and UV emission in extreme Population I material. M74's color profiles all become bluer with increasing radius. The (m(152) - m(249)) color as measured by UIT averages near 0.0 (the color of an A0 star) over the central 20 sec radius and decreases from approximately -0.2 to approximately -0.4 from 20 sec to 200 sec. The spiral arms are the dominant component of the surface photometry colors; interarm regions are slightly redder. In the UV, M74's nuclear region resembles its disk/spiral arm material in colors and morphology, unlike galaxies such as M81. No UV 'bulge' is apparent. The m(152) - m(249) colors and models of M74's central region clearly demonstrate that there is no significant population of O or B stars present in the central 10 sec. M74's UV morphology and (m(152) - m(249)) color profiles are similar to those of M33, although M74 is approximately 0.5 mag redder. M81 has a smooth UV bulge which is much redder than the nuclear regions of M74 and M33. M74 is approximately 0.4 mag bluer than M81 in its outer disk, although M81 has bright UV sources only in spiral arms more than 5 kpc from its center. We investigate possible explanations for the color profiles of the galaxies and the differences among the galaxies: abundances; reddening due to internal dust; interplanetary magnetic field (IMF) variations, and the history of formation of the dominant generations of stars. Abundance and IMF variations do not produce large enough m(152) - m(249) or UV - V color differences. Comparing model UV/optical colors with those of M74 shows that M74's disk has undergone significant star formation over the past 500 Myr, and that either the star-formation history or the extinction varies systematically across M74's disk. Comparison of M74, M33, and M81 (UV - V) colors shows that M74 colors range from the bluest of M33's colors to the bluest of M81's. The failure of reddening models to cover the range of colors, and the known abundance range in such material, leads to the conclusion that star-formation history varies significantly as a function of radius in these galaxies, and that such variation is required to explain the range of colors observed in M74, M33, and M81.

The Jovian UV aurorae as seen by Juno-UVS

NASA Astrophysics Data System (ADS)

Bonfond, Bertrand; Gladstone, Randy; Grodent, Denis; Hue, Vincent; Gérard, Jean-Claude; Versteeg, Maarten; Greathouse, Thomas; Davis, Michael; Bolton, Scott; Levin, Steven; Connerney, John; Bagenal, Fran

2017-04-01

The Juno spacecraft was inserted in orbit around Jupiter on July 4th 2016. Its highly elongated polar orbit brings it <5000 km above the cloud tops every 53,5 days, allowing spectacular and unprecedented views of its polar aurorae. The Juno-UVS instrument is an imaging spectrograph observing perpendicularly to the Juno spin axis. It is equipped with a moving scan mirror at the entrance of the instrument that allows the field of view to be directed up to +/-30° away from the spin plane. The 70-205 nm bandpass comprises key UV auroral emissions such as the H2 bands and the H Lyman alpha line, as well as hydrocarbon absorption bands. We present polar maps of the aurorae at Jupiter for the first three first few periapses. These maps offer the first high resolution observations of the night-side aurorae. We will discuss the observed auroral morphology, including the satellite footprints, the outer emissions, the main emission and the polar emissions. We will also show maps of the color ratio, comparing the relative intensity of wavelengths subject to different degrees of absorption by CH4. Such measurements directly relate to the energy of the precipitating particles, since the more energetic the particles, the deeper they penetrate and the stronger the resulting methane absorption. For example, we will show evidence of longitudinal shifts between the brightness peaks and color ratio peaks in several auroral features. Such shifts may be interpreted as the result of the differential particle drift in plasma injection signatures.

CCD imaging sensors

NASA Technical Reports Server (NTRS)

Janesick, James R. (Inventor); Elliott, Stythe T. (Inventor)

1989-01-01

A method for promoting quantum efficiency (QE) of a CCD imaging sensor for UV, far UV and low energy x-ray wavelengths by overthinning the back side beyond the interface between the substrate and the photosensitive semiconductor material, and flooding the back side with UV prior to using the sensor for imaging. This UV flooding promotes an accumulation layer of positive states in the oxide film over the thinned sensor to greatly increase QE for either frontside or backside illumination. A permanent or semipermanent image (analog information) may be stored in a frontside SiO.sub.2 layer over the photosensitive semiconductor material using implanted ions for a permanent storage and intense photon radiation for a semipermanent storage. To read out this stored information, the gate potential of the CCD is biased more negative than that used for normal imaging, and excess charge current thus produced through the oxide is integrated in the pixel wells for subsequent readout by charge transfer from well to well in the usual manner.

Berkeley extreme-ultraviolet airglow rocket spectrometer: BEARS.

PubMed

Cotton, D M; Chakrabarti, S

1992-09-20

We describe the Berkeley extreme-UV airglow rocket spectrometer, which is a payload designed to test several thermospheric remote-sensing concepts by measuring the terrestrial O I far-UV and extreme-UV dayglow and the solar extreme-UV spectrum simultaneously. The instrument consisted of two near-normal Rowland mount spectrometers and a Lyman-alpha photometer. The dayglow spectrometer covered two spectral regions from 980 to 1040 A and from 1300 to 1360 A with 1.5-A resolution. The solar spectrometer had a bandpass of 250-1150 A with an ~ 10-A resolution. All three spectra were accumulated by using a icrochannel-plate-intensified, two-dimensional imaging detector with three separate wedge-and strip anode readouts. The hydrogen Lyman-alpha photometer was included to monitor the solar Lyman-alpha irradiance and geocoronal Lyman-alpha emissions. The instrument was designed, fabricated, and calibrated at the University of California, Berkeley and was successfully launched on 30 September 1988 aboard the first test flight of a four-stage sounding rocket, Black Brant XII.

Line-profile and continuum variations of the contact binary SV Centauri

NASA Technical Reports Server (NTRS)

Rahe, J.; Drechsel, H.; Wargau, W.

1982-01-01

A total of five high and ten low dispersion UV spectra of the interacting contact binary SV Centauri obtained between 1979 and 1982 are analyzed. The low resolution observations cover the whole phase range, while a few selected phases were observed in high dispersion. The UV data were complemented with optical photometric and spectroscopic observations, in order to determine the tructure and absolute dimensions of the system. The profiles of prominent UV resonance and metastable lines undergo drastic changes with phase angle and time. Their overall appearance indicates relatively strong mass loss from the system, exhibiting pronounced variations of the stellar wind. The far UV continuum distribution suggests the presence of a luminous hot radiation source with maximum emission in the soft X-ray range, which is most apparently seen during the first quadrature phase, while it is weakest close to primary minimum. The case exchange and mass loss process as well as the evolutionary stage of SV Centauri are discussed.

The Ultraviolet Spectrograph on NASA's Juno Mission

NASA Astrophysics Data System (ADS)

Gladstone, G. Randall; Persyn, Steven C.; Eterno, John S.; Walther, Brandon C.; Slater, David C.; Davis, Michael W.; Versteeg, Maarten H.; Persson, Kristian B.; Young, Michael K.; Dirks, Gregory J.; Sawka, Anthony O.; Tumlinson, Jessica; Sykes, Henry; Beshears, John; Rhoad, Cherie L.; Cravens, James P.; Winters, Gregory S.; Klar, Robert A.; Lockhart, Walter; Piepgrass, Benjamin M.; Greathouse, Thomas K.; Trantham, Bradley J.; Wilcox, Philip M.; Jackson, Matthew W.; Siegmund, Oswald H. W.; Vallerga, John V.; Raffanti, Rick; Martin, Adrian; Gérard, J.-C.; Grodent, Denis C.; Bonfond, Bertrand; Marquet, Benoit; Denis, François

2017-11-01

The ultraviolet spectrograph instrument on the Juno mission (Juno-UVS) is a long-slit imaging spectrograph designed to observe and characterize Jupiter's far-ultraviolet (FUV) auroral emissions. These observations will be coordinated and correlated with those from Juno's other remote sensing instruments and used to place in situ measurements made by Juno's particles and fields instruments into a global context, relating the local data with events occurring in more distant regions of Jupiter's magnetosphere. Juno-UVS is based on a series of imaging FUV spectrographs currently in flight—the two Alice instruments on the Rosetta and New Horizons missions, and the Lyman Alpha Mapping Project on the Lunar Reconnaissance Orbiter mission. However, Juno-UVS has several important modifications, including (1) a scan mirror (for targeting specific auroral features), (2) extensive shielding (for mitigation of electronics and data quality degradation by energetic particles), and (3) a cross delay line microchannel plate detector (for both faster photon counting and improved spatial resolution). This paper describes the science objectives, design, and initial performance of the Juno-UVS.

DichroCalc: Improvements in Computing Protein Circular Dichroism Spectroscopy in the Near-Ultraviolet.

PubMed

Jasim, Sarah B; Li, Zhuo; Guest, Ellen E; Hirst, Jonathan D

2017-12-16

A fully quantitative theory connecting protein conformation and optical spectroscopy would facilitate deeper insights into biophysical and simulation studies of protein dynamics and folding. The web server DichroCalc (http://comp.chem.nottingham.ac.uk/dichrocalc) allows one to compute from first principles the electronic circular dichroism spectrum of a (modeled or experimental) protein structure or ensemble of structures. The regular, repeating, chiral nature of secondary structure elements leads to intense bands in the far-ultraviolet (UV). The near-UV bands are much weaker and have been challenging to compute theoretically. We report some advances in the accuracy of calculations in the near-UV, realized through the consideration of the vibrational structure of the electronic transitions of aromatic side chains. The improvements have been assessed over a set of diverse proteins. We illustrate them using bovine pancreatic trypsin inhibitor and present a new, detailed analysis of the interactions which are most important in determining the near-UV circular dichroism spectrum. Copyright © 2018. Published by Elsevier Ltd.

Past, present, and future of exoplanet research at UV wavelengths

NASA Astrophysics Data System (ADS)

Fossati, Luca

2016-07-01

The study of extra-solar planets (exoplanets) is arguably the most exciting and fastest-growing field in Astrophysics. We are only now beginning to see and understand the large variety of exoplanets, starting to classify them on the basis of their properties. Observations of transiting close-in planets at ultraviolet (UV) wavelengths revealed that such planets are subject to powerful mass-loss that shapes planetary structure, composition, and evolution. Thanks mostly to the Hubble Space Telescope, the past decade has seen great advances in the study of planet evaporation, but there are still many open questions and the the observations obtained so far were not able to provide enough constraints to the many models that have been developed in the meantime. I will review the past observations and advances in exoplanet science obtained on the basis of UV observations and discuss the prospects of further discoveries on the basis of the currently available and planned UV space telescopes.

A Search for Rarely Seen Ultraviolet Coma Emissions and New Species Upper Limits at Comet 67P/Churyumov-Gerasimenko Using the Rosetta-Alice Ultraviolet Spectrograph

NASA Astrophysics Data System (ADS)

Noonan, J.; Stern, S. A.; Parker, J. W.; Keeney, B. A.; Weaver, H. A., Jr.; Feldman, P.; Steffl, A.; Feaga, L. M.; Bertaux, J. L.

2017-12-01

The Alice far/extreme-UV spectrograph aboard Rosetta is one of three US instruments provided by NASA; it is the first UV spectrograph to reach any comet. Numerous scientific results have been obtained regarding 67P/Churyumov-Gerasimenko by this instrument. Here we summarize two new sets of results from a search for rarely appearing atomic and molecular spectral emission features and a grand sum spectrum allowing us to place new atomic and molecular neutral and ionized species upper limits in the comet's coma.

UV properties of hot stars in NGC 6752

NASA Technical Reports Server (NTRS)

Altner, Bruce

1990-01-01

The UV properties of hot stars found in the center of NGC 6752 are compared with those outside the core. Few, if any, faint sdB stars are found in the central region, whereas they occur in significant numbers far from the core. A statistically complete photographic survey is used to demonstrate that the faint blue stars in NGC 6752 occur in greater numbers with increasing distance form the center, and the International Ultraviolet Explorer (IUE) findings extend this result all the way to the center of the cluster. A similar phenomenon has been observed optically in other clusters, such as M15.

Occurrence and toxicity of musks and UV filters in the marine environment.

PubMed

S, Rainieri; A, Barranco; M, Primec; T, Langerholc

2017-06-01

Emerging chemical contaminants in the marine ecosystem represent a threat to the environment and also to human health due to insufficient knowledge about their toxicity and bioaccumulation in the food chain. Consequently, many of them are not regulated. In this review we focus on musks and organic UV filters. For both groups of compounds we describe occurrence in the marine environment, toxic effects identified so far and methods used to identify such effects. The final objective of this work is to identify gaps in the understanding of their toxicology. Copyright © 2016 Elsevier Ltd. All rights reserved.

Results from the Ultraviolet Imaging Telescope on the Astro-2 Mission

NASA Astrophysics Data System (ADS)

Stecher, T. P.; Bohlin, R. C.; Neff, S. G.; O'Connell, R. W.; Roberts, M. R.; Smith, A. M.

1995-03-01

The solar-blind UIT camera with a CsI cathode obtained 722 frames with a cumulative exposure time of 260705 seconds during the March 1995 Astro-2 mission of Space Shuttle Endeavour. Filters were used to isolate selected bandpasses in the range 1200-1800 Angstroms, over the 40 arcmin field of view. Spatial resolution on most of the images is about 3 arcsec. Calibrated data, converted to machine-readable form, are under analysis and several posters on these investigations are presented in the Astro-2 poster session at this meeting (a first look at the UIT observations of Omega Cen, M31, and the Cygnus Loop is further elaborated here). UIT imagery of 20 spiral galaxies was obtained as part of a Guest Investigator program (Wendy Freedman et al.). UV imaging suppresses the red stellar population as expected and enhances the appearance of tracers of recent star formation. Known \\hii regions in these galaxies are made apparent through the scattering of stellar ultraviolet light by interstellar dust; typically their shapes differ from those seen in \\ha. A radial color gradient investigation will be delayed until ground observations can be made as the long-wavelength camera failed on launch and only the 1520 Angstroms and 1620 Angstroms images were made. The far-UV (1520 Angstroms) features are detected well beyond the Holmberg radius. UV/visible color-magnitude diagrams will be made as they were for the data from Astro-1. Our deepest images of the Magellanic Clouds reveal a rich field of luminous clusters and stars that are being searched for UV counterparts of the known x-ray sources in the photographed areas. The observed stars in the Clouds will be used to determine the current mass function. The respective contributions of nebular and stellar UV light in reflection nebulae are will be studied as several nebulae were observed with differing geometries and will provide interesting results on the far-UV albedo and phase function of nebular dust. A dozen globular and open clusters were imaged.

Experimental Evaluation of Adaptive Modulation and Coding in MIMO WiMAX with Limited Feedback

NASA Astrophysics Data System (ADS)

Mehlführer, Christian; Caban, Sebastian; Rupp, Markus

2007-12-01

We evaluate the throughput performance of an OFDM WiMAX (IEEE 802.16-2004, Section 8.3) transmission system with adaptive modulation and coding (AMC) by outdoor measurements. The standard compliant AMC utilizes a 3-bit feedback for SISO and Alamouti coded MIMO transmissions. By applying a 6-bit feedback and spatial multiplexing with individual AMC on the two transmit antennas, the data throughput can be increased significantly for large SNR values. Our measurements show that at small SNR values, a single antenna transmission often outperforms an Alamouti transmission. We found that this effect is caused by the asymmetric behavior of the wireless channel and by poor channel knowledge in the two-transmit-antenna case. Our performance evaluation is based on a measurement campaign employing the Vienna MIMO testbed. The measurement scenarios include typical outdoor-to-indoor NLOS, outdoor-to-outdoor NLOS, as well as outdoor-to-indoor LOS connections. We found that in all these scenarios, the measured throughput is far from its achievable maximum; the loss is mainly caused by a too simple convolutional coding.

Nanostructured plasmonic interferometers for ultrasensitive label-free biosensing

NASA Astrophysics Data System (ADS)

Gao, Yongkang

Optical biosensors that utilize surface plasmon resonance (SPR) technique to analyze the biomolecular interactions have been extensively explored in the last two decades and have become the gold standard for label-free biosensing. These powerful sensing tools allow fast, highly-sensitive monitoring of the interaction between biomolecules in real time, without the need for laborious fluorescent labeling, and have found widely ranging applications from biomedical diagnostics and drug discovery, to environmental sensing and food safety monitoring. However, the prism-coupling SPR geometry is complex and bulky, and has severely limited the integration of this technique into low-cost portable biomedical devices for point-of-care diagnostics and personal healthcare applications. Also, the complex prism-coupling scheme prevents the use of high numerical aperture (NA) optics to increase the spatial resolution for multi-channel, high-throughput detection in SPR imaging mode. This dissertation is focused on the design and fabrication of a promising new class of nanopatterned interferometric SPR sensors that integrate the strengths of miniaturized nanoplasmonic architectures with sensitive optical interferometry techniques to achieve bold advances in SPR biosensing. The nanosensor chips developed provide superior sensing performance comparable to conventional SPR systems, but employing a far simpler collinear optical transmission geometry, which largely facilitates system integration, miniaturization, and low-cost production. Moreover, the fabricated nanostructure-based SPR sensors feature a very small sensor footprint, allowing massive multiplexing on a chip for high-throughput detection. The successful transformation of SPR technique from bulky prism-coupling setup into this low-cost compact plasmonic platform would have a far-reaching impact on point-of-care diagnostic tools and also lead to advances in high-throughput sensing applications in proteomics, immunology, drug discovery, and fundamental cell biology research.

STS-39 AFP-675 CIRRIS-1A in OV-103's payload bay (PLB)

NASA Image and Video Library

1991-05-06

STS039-85-073 (28 April- 6 May 1991) --- This 70mm frame, taken from inside the crew cabin, shows a close-up view of the Air Force Program (AFP) 675 package. AFP-675 consists of the Cryogenic Infrared Radiance Instrumentation for Shuttle (CIRRIS)-1A; Far Ultraviolet Camera (FAR-UV) Experiment; Horizon Ultraviolet Program (HUP); Quadruple Ion Neutral Mass Spectrometer (QINMS); and the Uniformly Redundant Array (URA). Much of that hardware is backdropped here against the aft cargo bay bulkhead of Discovery.

The Lyman Imaging Telescope Experiment (LITE)

NASA Technical Reports Server (NTRS)

Siegmund, O. H. W.

1997-01-01

The scientific aim of the LITE mission is to carry out the first set of very high spatial resolution (0.2 arc sec), wide field of view (10 arc minute), pointed astronomical observations in several narrow wavelength bands in the far ultraviolet region of the spectrum (900-1600 A). Two wavelength regions in the far UV were chosen to be of prime scientific importance for the LITE mission: 1030A and 1240A. It was therefore decided to design and test novel, narrow band, high reflectance multilayer filters for these observations.

Mammalian skin cell biology: at the interface between laboratory and clinic.

PubMed

Watt, Fiona M

2014-11-21

Mammalian skin research represents the convergence of three complementary disciplines: cell biology, mouse genetics, and dermatology. The skin provides a paradigm for current research in cell adhesion, inflammation, and tissue stem cells. Here, I discuss recent insights into the cell biology of skin. Single-cell analysis has revealed that human epidermal stem cells are heterogeneous and differentiate in response to multiple extrinsic signals. Live-cell imaging, optogenetics, and cell ablation experiments show skin cells to be remarkably dynamic. High-throughput, genome-wide approaches have yielded unprecedented insights into the circuitry that controls epidermal stem cell fate. Last, integrative biological analysis of human skin disorders has revealed unexpected functions for elements of the skin that were previously considered purely structural. Copyright © 2014, American Association for the Advancement of Science.

Scheduling with hop-by-hop priority increasing in meshed optical burst-switched network

NASA Astrophysics Data System (ADS)

Chang, Hao; Luo, Jiangtao; Zhang, Zhizhong; Xia, Da; Gong, Jue

2006-09-01

In OBS, JET (Just-Enough-Time) is the classical wavelength reservation scheme. But there is a phenomenon that the burst priority decreasing hop-by-hop in multi-hop networks that will waste the bandwidth that was used in the upstream. Based on the HPI (Hop-by-hop Priority Increasing) proposed in the former research, this paper will do an unprecedented simulation in 4×4 meshed topology, which is closer to the real network environment with the help of a NS2-based OBSN simulation platform constructed by ourselves. By contrasting, the drop probability and throughput on one of the longest end-to-end path lengths in the whole networks, it shows that the HPI scheme can improve the utilance of bandwidth better.

Microbial Ecology and Evolution in the Acid Mine Drainage Model System.

PubMed

Huang, Li-Nan; Kuang, Jia-Liang; Shu, Wen-Sheng

2016-07-01

Acid mine drainage (AMD) is a unique ecological niche for acid- and toxic-metals-adapted microorganisms. These low-complexity systems offer a special opportunity for the ecological and evolutionary analyses of natural microbial assemblages. The last decade has witnessed an unprecedented interest in the study of AMD communities using 16S rRNA high-throughput sequencing and community genomic and postgenomic methodologies, significantly advancing our understanding of microbial diversity, community function, and evolution in acidic environments. This review describes new data on AMD microbial ecology and evolution, especially dynamics of microbial diversity, community functions, and population genomes, and further identifies gaps in our current knowledge that future research, with integrated applications of meta-omics technologies, will fill. Copyright © 2016 Elsevier Ltd. All rights reserved.

Microfluidic Technologies for Synthetic Biology

PubMed Central

Vinuselvi, Parisutham; Park, Seongyong; Kim, Minseok; Park, Jung Min; Kim, Taesung; Lee, Sung Kuk

2011-01-01

Microfluidic technologies have shown powerful abilities for reducing cost, time, and labor, and at the same time, for increasing accuracy, throughput, and performance in the analysis of biological and biochemical samples compared with the conventional, macroscale instruments. Synthetic biology is an emerging field of biology and has drawn much attraction due to its potential to create novel, functional biological parts and systems for special purposes. Since it is believed that the development of synthetic biology can be accelerated through the use of microfluidic technology, in this review work we focus our discussion on the latest microfluidic technologies that can provide unprecedented means in synthetic biology for dynamic profiling of gene expression/regulation with high resolution, highly sensitive on-chip and off-chip detection of metabolites, and whole-cell analysis. PMID:21747695

NICER ground verification: as-built timing, spectroscopy, and throughout performance of NASA's next X-raytiming astrophysics mission

NASA Astrophysics Data System (ADS)

Gendreau, Keith; Arzoumanian, Zaven; NICER Team

2017-01-01

The Neutron star Interior Composition Explorer (NICER) Mission of Opportunity will fly to the International Space Station (ISS) in 2017 aboard a SpaceX resupply vehicle. Once installed as an external attached payload, NICER will provide an unprecedented soft X-ray timing spectroscopy capability for neutron stars and other phenomena. In June 2016, the NICER payload was delivered from NASA Goddard Space Flight Center to Cape Canaveral to await launch processing. We present measurements made as part of NICER's preship testing to verify performance of its X-ray Timing Instrument and associated subsystems; these measurements demonstrate that NICER meets or surpasses its design requirements in the areas of photon time-tagging resolution, energy resolution, effective collecting area, and high-rate throughput.

Performance results from in-flight commissioning of the Juno Ultraviolet Spectrograph (Juno-UVS)

NASA Astrophysics Data System (ADS)

Greathouse, T. K.; Gladstone, G. R.; Davis, M. W.; Slater, D. C.; Versteeg, M. H.; Persson, K. B.; Walther, B. C.; Winters, G. S.; Persyn, S. C.; Eterno, J. S.

2013-09-01

We present a description of the Juno ultraviolet spectrograph (Juno-UVS) and results from its in-flight commissioning performed between December 5th and 13th 2011 and its first periodic maintenance between October 10th and 12th 2012. Juno-UVS is a modest power (9.0 W) ultraviolet spectrograph based on the Alice instruments now in flight aboard the European Space Agency's Rosetta spacecraft, NASA's New Horizons spacecraft, and the LAMP instrument aboard NASA's Lunar Reconnaissance Orbiter. However, unlike the other Alice spectrographs, Juno-UVS sits aboard a spin stabilized spacecraft. The Juno-UVS scan mirror allows for pointing of the slit approximately +/-30° from the spacecraft spin plane. This ability gives Juno-UVS access to half the sky at any given spacecraft orientation. The planned 2 rpm spin rate for the primary mission results in integration times per 0.2° spatial resolution element per spin of only ~17 ms. Thus, for calibration purposes, data were retrieved from many spins and then remapped and co-added to build up exposure times on bright stars to measure the effective area, spatial resolution, scan mirror pointing positions, etc. The primary job of Juno-UVS will be to characterize Jupiter's UV auroral emissions and relate them to in-situ particle measurements. The ability to point the slit will make operations more flexible, allowing Juno-UVS to observe the atmospheric footprints of magnetic field lines through which Juno flies, giving a direct connection between energetic particle measurements on the spacecraft and the far-ultraviolet emissions produced by Jupiter's atmosphere in response to those particles.

New facilities for Al+MgF2 coating for 2-m class mirrors for UV

NASA Astrophysics Data System (ADS)

Zhupanov, Valery; Vlasenko, Oleg; Sachkov, Mikhail; Fedoseev, Viktor

2014-07-01

The World Space Observatory--Ultraviolet (WSO--UV) project is a Russian-Spanish space mission for spectroscopic and imaging observations in the UV domain (115-320 nm) where some of the most important astrophysical processes can be efficiently studied with unprecedented capability. In the horizon of the next decade, WSO--UV will be the only mission with the large primary mirror fully devoted for UV studies. The observatory includes a 170 cm aperture telescope capable of high-resolution spectroscopy, long slit low-resolution spectroscopy, and deep UV imaging. The telescope T-170M is a Ritchey-Chrétien with a F/10 focal ratio and a corrected field of view of 0.5 degrees. Specific data on the WSO-UV project (telescope, satellite, orbit, launcher, ground segment, etc.) are given in [1-6]. The current status of the WSO-UV focal plane instruments, their status of implementation, and the expected performances are presented in [7]. The science drivers of the WSO-UV mission are described in [8, 9]. The main WSO-UV instruments, spectrographs (WUVS instrument) and imagers (ISSIS instrument) are described in [10-13] and [14-15] correspondingly. The prospects of stellar studies with WSO-UV are presented in papers [16-17]. A paper [18] describes our experience of using the DP-190 glue for adhesive attachment of a large space mirror and its rim. In the instrument compartment, see Figure 1, the optical bench (OB) - used as reference plane for all the onboard instrumentation - is aligned and maintained in the correct position with respect to the primary mirror (PM) using a three rods system. An imaging instrument ISSIS is mounted on the upper basis of the optical bench, in the space available between the PM and the OB itself, while spectrographs (WUVS instrument) are mounted to the OB bottom basis. One of the primary tasks in creating telescope's PM is to apply coating with required reflective and protective properties. Aluminum is a well known reflecting coating for wavelength above 120 nm [19] with reflectivity more than 90% at wavelength longer than 200 nm, but the spectral range from 700 to 900 nm, where it's lowest value of reflectivity is 86% at 850 nm. That makes aluminum one of the best coating materials in the creating a mirror for operations in vacuum ultraviolet. However, the aluminum membrane is prone to oxidization, so applying the protecting coating is essential. Magnesium fluoride is one of the few materials transparent in the UV range [20]. In this contribution, capacities of new facilities in LUCH company that are created for World Space Observatory - Ultraviolet (WSO-UV) project are described in Section 2, the process of applying Al + MgF2 coating workout is presented in Section 3, results of applying Al+MgF2 coating for WSO-UV primary mirror are presented in Section 4 and a brief summary are provided in the concluding Section 5.

UV filters for lighting of plants

NASA Astrophysics Data System (ADS)

Doehring, T.; Koefferlein, M.; Thiel, S.; Seidlitz, H. K.; Payer, H. D.

1994-03-01

The wavelength dependent interaction of biological systems with radiation is commonly described by appropriate action spectra. Particularly effective plant responses are obtained for ultraviolet (UV) radiation. Excess shortwave UV-B radiation will induce genetic defects and plant damage. Besides the ecological discussion of the deleterious effects of the excess UV radiation there is increasing interest in horticultural applications of this spectral region. Several metabolic pathways leading to valuable secondary plant products like colors, odors, taste, or resulting in mechanical strength and vitality are triggered by UV radiation. Thus, in ecologically as well as in economically oriented experiments the exact generation and knowledge of the spectral irradiance, particularly near the UV absorption edge, is essential. The ideal filter 'material' to control the UV absorption edge would be ozone itself. However, due to problems in controlling the toxic and chemically aggressive, instable gas, only rather 'small ozone filters' have been realized so far. In artificial plant lighting conventional solid filter materials such as glass sheets and plastic foils (celluloseacetate or cellulosetriacetate) which can be easily handled have been used to absorb the UV-C and the excess shortwave UV-B radiation of the lamp emissions. Different filter glasses are available which provide absorption properties suitable for gradual changes of the spectral UV-B illumination of artificial lighting. Using a distinct set of lamps and filter glasses an acceptable simulation of the UV-B part of natural global radiation can be achieved. The aging of these and other filter materials under the extreme UV radiation in the lamphouse of a solar simulator is presently unavoidable. This instability can be dealt with only by a precise spectral monitoring and by replacing the filters accordingly. For this reason attempts would be useful to develop real ozone filters which can replace glass filters. In any case chamber experiments require a careful selection of the filter material used and must be accompanied by a continuous UV-B monitoring.

UV filters for lighting of plants

NASA Technical Reports Server (NTRS)

Doehring, T.; Koefferlein, M.; Thiel, S.; Seidlitz, H. K.; Payer, H. D.

1994-01-01

The wavelength dependent interaction of biological systems with radiation is commonly described by appropriate action spectra. Particularly effective plant responses are obtained for ultraviolet (UV) radiation. Excess shortwave UV-B radiation will induce genetic defects and plant damage. Besides the ecological discussion of the deleterious effects of the excess UV radiation there is increasing interest in horticultural applications of this spectral region. Several metabolic pathways leading to valuable secondary plant products like colors, odors, taste, or resulting in mechanical strength and vitality are triggered by UV radiation. Thus, in ecologically as well as in economically oriented experiments the exact generation and knowledge of the spectral irradiance, particularly near the UV absorption edge, is essential. The ideal filter 'material' to control the UV absorption edge would be ozone itself. However, due to problems in controlling the toxic and chemically aggressive, instable gas, only rather 'small ozone filters' have been realized so far. In artificial plant lighting conventional solid filter materials such as glass sheets and plastic foils (celluloseacetate or cellulosetriacetate) which can be easily handled have been used to absorb the UV-C and the excess shortwave UV-B radiation of the lamp emissions. Different filter glasses are available which provide absorption properties suitable for gradual changes of the spectral UV-B illumination of artificial lighting. Using a distinct set of lamps and filter glasses an acceptable simulation of the UV-B part of natural global radiation can be achieved. The aging of these and other filter materials under the extreme UV radiation in the lamphouse of a solar simulator is presently unavoidable. This instability can be dealt with only by a precise spectral monitoring and by replacing the filters accordingly. For this reason attempts would be useful to develop real ozone filters which can replace glass filters. In any case chamber experiments require a careful selection of the filter material used and must be accompanied by a continuous UV-B monitoring.

Space Telescope and Optical Reverberation Mapping Project VI. Variations of the Intrinsic Absorption Lines in NGC 5548

NASA Astrophysics Data System (ADS)

Kriss, Gerard A.; Agn Storm Team

2015-01-01

The AGN STORM collaboration monitored the Seyfert 1 galaxy NGC 5548 over a six-month period, with observations spanning the hard X-ray to mid-infrared wavebands. The core of this campaign was an intensive HST COS program, which obtained 170 far-ultraviolet spectra at approximately daily intervals, with twice-per-day monitoring of the X-ray, near-UV, and optical bands during much of the same period using Swift. The broad UV absorption lines discovered by Kaastra et al. (2014) and associated with the new soft X-ray obscurer are continuously present in the STORM campaign COS spectra. Their strength varies with the degree of soft X-ray obscuration as revealed by the Swift X-ray spectra. The narrow associated absorption lines in the UV spectrum of NGC 5548 remain strong. The lower-ionization transitions that appeared concurrently with the soft X-ray obscuration vary in response to the changing UV flux on a daily basis. Their depths over the longer term, however, also respond to the strength of the soft X-ray obscuration, indicating that the soft X-ray obscurer has a significant influence on the ionizing UV continuum that is not directly tracked by the observable UV continuum itself.

Infrared measurements on ultraviolet photolysis products at cryogenic temperatures

NASA Astrophysics Data System (ADS)

Dong, Weibing; He, Ping; Wang, Jessie; Zhou, Zhaohui; Wang, Hongxin

2013-01-01

Combination of ultraviolet (UV) photolysis with infrared (IR) spectroscopy (or UV/IR for abbreviation) is a powerful tool to study various chemical photoreactions, while cryostat and sample-cell windows define the working ranges for both UV and IR beams. Although diamond window has a very wide transmission range from UV to IR, the extreme cost, the absorptions at 1800-2600 cm-1 and other problems prevent it from being the solution for all cases. In this paper, a gas-exchange cryostat was modified to realize a UV/mid-IR experiment at cryogenic temperatures. Several windows (including diamond) were discussed as options. A di-nitrogen iron complex trans-[Fe(DMeOPrPE)2(N2)H][BPh4] [DMeOPrPE = 1,2-bis(dimethoxypropylphosphino)ethane] was studied as a real photolysis example. Alternatively, a cold-finger cryostat was modified for UV/far-IR compatible experiments. Non-photolysis samples K5[Mo4O11(R,S-Hhomocit)2]Cl·5H2O (H4homocit = homocitric acid) and [(n-Bu)4N]2[Fe4S4(PPh)4] were studied at cryogenic temperatures. Sample cell windows can also be used as a natural way for choosing photolysis wavelength (in addition to the use of optical filters).

Imaging Variable Stars with HST

NASA Astrophysics Data System (ADS)

Karovska, Margarita

2011-05-01

The Hubble Space Telescope (HST) observations of astronomical sources, ranging from objects in our solar system to objects in the early Universe, have revolutionized our knowledge of the Universe its origins and contents.I will highlight results from HST observations of variable stars obtained during the past twenty or so years. Multiwavelength observations of numerous variable stars and stellar systems were obtained using the superb HST imaging capabilities and its unprecedented angular resolution, especially in the UV and optical. The HST provided the first detailed images probing the structure of variable stars including their atmospheres and circumstellar environments. AAVSO observations and light curves have been critical for scheduling of many of these observations and provided important information and context for understanding of the imaging results of many variable sources. I will describe the scientific results from the imaging observations of variable stars including AGBs, Miras, Cepheids, semi-regular variables (including supergiants and giants), YSOs and interacting stellar systems with a variable stellar components. These results have led to an unprecedented understanding of the spatial and temporal characteristics of these objects and their place in the stellar evolutionary chains, and in the larger context of the dynamic evolving Universe.

Imaging Variable Stars with HST

NASA Astrophysics Data System (ADS)

Karovska, M.

2012-06-01

(Abstract only) The Hubble Space Telescope (HST) observations of astronomical sources, ranging from objects in our solar system to objects in the early Universe, have revolutionized our knowledge of the Universe its origins and contents. I highlight results from HST observations of variable stars obtained during the past twenty or so years. Multiwavelength observations of numerous variable stars and stellar systems were obtained using the superb HST imaging capabilities and its unprecedented angular resolution, especially in the UV and optical. The HST provided the first detailed images probing the structure of variable stars including their atmospheres and circumstellar environments. AAVSO observations and light curves have been critical for scheduling of many of these observations and provided important information and context for understanding of the imaging results of many variable sources. I describe the scientific results from the imaging observations of variable stars including AGBs, Miras, Cepheids, semiregular variables (including supergiants and giants), YSOs and interacting stellar systems with a variable stellar components. These results have led to an unprecedented understanding of the spatial and temporal characteristics of these objects and their place in the stellar evolutionary chains, and in the larger context of the dynamic evolving Universe.

Unprecedented ultrahigh photocatalytic activity of δ-Bi2O3 for cylindrospermopsin decomposition

NASA Astrophysics Data System (ADS)

Sudrajat, Hanggara

2017-11-01

The delta phase of bismuth oxide (δ-Bi2O3) is an important metal oxide due to its highest conductivity of any oxide material. However, it is only stable over a narrow high temperature range, and thus, incorporation of small, high-valence cation is a prerequisite for stabilizing its cubic structure to room temperature. The δ-Bi2O3 is also known to have low photocatalytic activity because of its low conduction band edge. As a consequence, the conduction band electrons cannot be consumed by the dissolved oxygen to produce superoxide radicals. Herein, for the first time, the δ-Bi2O3 has been successfully synthesized through a facile hydrothermal route without addition of any dopant. The as-synthesized δ-Bi2O3 shows ultrahigh photocatalytic activity for cylindrospermopsin decomposition. Within only 20 min of UV irradiation, the degradation efficiency for cylindrospermopsin by 0.5 g/L of the δ-Bi2O3 with a cylindrospermopsin concentration of 5 mg/L reaches 98%. Restricted charge carrier recombination and effective consumption of the conduction band electrons are behind such an unprecedented high photocatalytic activity of the δ-Bi2O3. [Figure not available: see fulltext.

High-throughput machining using high average power ultrashort pulse lasers and ultrafast polygon scanner

NASA Astrophysics Data System (ADS)

Schille, Joerg; Schneider, Lutz; Streek, André; Kloetzer, Sascha; Loeschner, Udo

2016-03-01

In this paper, high-throughput ultrashort pulse laser machining is investigated on various industrial grade metals (Aluminium, Copper, Stainless steel) and Al2O3 ceramic at unprecedented processing speeds. This is achieved by using a high pulse repetition frequency picosecond laser with maximum average output power of 270 W in conjunction with a unique, in-house developed two-axis polygon scanner. Initially, different concepts of polygon scanners are engineered and tested to find out the optimal architecture for ultrafast and precision laser beam scanning. Remarkable 1,000 m/s scan speed is achieved on the substrate, and thanks to the resulting low pulse overlap, thermal accumulation and plasma absorption effects are avoided at up to 20 MHz pulse repetition frequencies. In order to identify optimum processing conditions for efficient high-average power laser machining, the depths of cavities produced under varied parameter settings are analyzed and, from the results obtained, the characteristic removal values are specified. The maximum removal rate is achieved as high as 27.8 mm3/min for Aluminium, 21.4 mm3/min for Copper, 15.3 mm3/min for Stainless steel and 129.1 mm3/min for Al2O3 when full available laser power is irradiated at optimum pulse repetition frequency.

High Throughput Sequencing for Detection of Foodborne Pathogens

PubMed Central

Sekse, Camilla; Holst-Jensen, Arne; Dobrindt, Ulrich; Johannessen, Gro S.; Li, Weihua; Spilsberg, Bjørn; Shi, Jianxin

2017-01-01

High-throughput sequencing (HTS) is becoming the state-of-the-art technology for typing of microbial isolates, especially in clinical samples. Yet, its application is still in its infancy for monitoring and outbreak investigations of foods. Here we review the published literature, covering not only bacterial but also viral and Eukaryote food pathogens, to assess the status and potential of HTS implementation to inform stakeholders, improve food safety and reduce outbreak impacts. The developments in sequencing technology and bioinformatics have outpaced the capacity to analyze and interpret the sequence data. The influence of sample processing, nucleic acid extraction and purification, harmonized protocols for generation and interpretation of data, and properly annotated and curated reference databases including non-pathogenic “natural” strains are other major obstacles to the realization of the full potential of HTS in analytical food surveillance, epidemiological and outbreak investigations, and in complementing preventive approaches for the control and management of foodborne pathogens. Despite significant obstacles, the achieved progress in capacity and broadening of the application range over the last decade is impressive and unprecedented, as illustrated with the chosen examples from the literature. Large consortia, often with broad international participation, are making coordinated efforts to cope with many of the mentioned obstacles. Further rapid progress can therefore be prospected for the next decade. PMID:29104564

Large-scale generation of human iPSC-derived neural stem cells/early neural progenitor cells and their neuronal differentiation.

PubMed

D'Aiuto, Leonardo; Zhi, Yun; Kumar Das, Dhanjit; Wilcox, Madeleine R; Johnson, Jon W; McClain, Lora; MacDonald, Matthew L; Di Maio, Roberto; Schurdak, Mark E; Piazza, Paolo; Viggiano, Luigi; Sweet, Robert; Kinchington, Paul R; Bhattacharjee, Ayantika G; Yolken, Robert; Nimgaonka, Vishwajit L; Nimgaonkar, Vishwajit L

2014-01-01

Induced pluripotent stem cell (iPSC)-based technologies offer an unprecedented opportunity to perform high-throughput screening of novel drugs for neurological and neurodegenerative diseases. Such screenings require a robust and scalable method for generating large numbers of mature, differentiated neuronal cells. Currently available methods based on differentiation of embryoid bodies (EBs) or directed differentiation of adherent culture systems are either expensive or are not scalable. We developed a protocol for large-scale generation of neuronal stem cells (NSCs)/early neural progenitor cells (eNPCs) and their differentiation into neurons. Our scalable protocol allows robust and cost-effective generation of NSCs/eNPCs from iPSCs. Following culture in neurobasal medium supplemented with B27 and BDNF, NSCs/eNPCs differentiate predominantly into vesicular glutamate transporter 1 (VGLUT1) positive neurons. Targeted mass spectrometry analysis demonstrates that iPSC-derived neurons express ligand-gated channels and other synaptic proteins and whole-cell patch-clamp experiments indicate that these channels are functional. The robust and cost-effective differentiation protocol described here for large-scale generation of NSCs/eNPCs and their differentiation into neurons paves the way for automated high-throughput screening of drugs for neurological and neurodegenerative diseases.

Design and Development of a Technology Platform for DNA-Encoded Library Production and Affinity Selection.

PubMed

Castañón, Jesús; Román, José Pablo; Jessop, Theodore C; de Blas, Jesús; Haro, Rubén

2018-06-01

DNA-encoded libraries (DELs) have emerged as an efficient and cost-effective drug discovery tool for the exploration and screening of very large chemical space using small-molecule collections of unprecedented size. Herein, we report an integrated automation and informatics system designed to enhance the quality, efficiency, and throughput of the production and affinity selection of these libraries. The platform is governed by software developed according to a database-centric architecture to ensure data consistency, integrity, and availability. Through its versatile protocol management functionalities, this application captures the wide diversity of experimental processes involved with DEL technology, keeps track of working protocols in the database, and uses them to command robotic liquid handlers for the synthesis of libraries. This approach provides full traceability of building-blocks and DNA tags in each split-and-pool cycle. Affinity selection experiments and high-throughput sequencing reads are also captured in the database, and the results are automatically deconvoluted and visualized in customizable representations. Researchers can compare results of different experiments and use machine learning methods to discover patterns in data. As of this writing, the platform has been validated through the generation and affinity selection of various libraries, and it has become the cornerstone of the DEL production effort at Lilly.

Massively parallel haplotyping on microscopic beads for the high-throughput phase analysis of single molecules.

PubMed

Boulanger, Jérôme; Muresan, Leila; Tiemann-Boege, Irene

2012-01-01

In spite of the many advances in haplotyping methods, it is still very difficult to characterize rare haplotypes in tissues and different environmental samples or to accurately assess the haplotype diversity in large mixtures. This would require a haplotyping method capable of analyzing the phase of single molecules with an unprecedented throughput. Here we describe such a haplotyping method capable of analyzing in parallel hundreds of thousands single molecules in one experiment. In this method, multiple PCR reactions amplify different polymorphic regions of a single DNA molecule on a magnetic bead compartmentalized in an emulsion drop. The allelic states of the amplified polymorphisms are identified with fluorescently labeled probes that are then decoded from images taken of the arrayed beads by a microscope. This method can evaluate the phase of up to 3 polymorphisms separated by up to 5 kilobases in hundreds of thousands single molecules. We tested the sensitivity of the method by measuring the number of mutant haplotypes synthesized by four different commercially available enzymes: Phusion, Platinum Taq, Titanium Taq, and Phire. The digital nature of the method makes it highly sensitive to detecting haplotype ratios of less than 1:10,000. We also accurately quantified chimera formation during the exponential phase of PCR by different DNA polymerases.

A Multiwavelength Study of POX 52, a Dwarf Seyfert Galaxy with an Intermediate-Mass Black Hole

NASA Astrophysics Data System (ADS)

Barth, Aaron

2004-07-01

We propose a comprehensive optical, UV, and X-ray investigation of the unique galaxy POX 52. POX 52 is a Seyfert 1 galaxy with unprecedented properties: its host galaxy appears to be a dwarf elliptical, and its stellar velocity dispersion is only 36 km/s. The stellar velocity dispersion and the broad emission-line widths both suggest a black hole mass of order 10^5 solar masses, placing POX 52 in a region of AGN parameter space that is almost completely unexplored at present. We request ACS/HRC imaging to perform a definitive measurement of the host galaxy structure; STIS UV and optical spectroscopy to study the nonstellar continuum and the structure of the broad-line region; and Chandra ACS imaging to detect the X-ray emission from the nucleus and investigate its spectral and variability properties. The results of this program will give a detailed understanding of the host galaxy and accretion properties of one of the very few known black holes in the mass range around 10^5 solar masses.

Unprecedented chemosensing behavior of novel tetra-substituted benzimidazole zinc(II) phthalocynine for selective detection of Bi3 + ion: Synthesis, characterization and ROS generation

NASA Astrophysics Data System (ADS)

Ullah, Azeem; Shah, Faheem; Khan, Imran; Anwar, Muhammad; Shah, Kiramat; Muhammad, Munira Taj; Ahmad, Farid

2018-03-01

In this work, synthesis of novel symmetrical 4-(2-bromo-4-(5-bromo-1H-benzo[d] imidazol-2-yl) phenoxy) tetra substituted zinc phthalocyanine has been reported. The novel benzimidazole zinc phthlocynine compound (3) has been characterized by MALDI-TOF MS, FT-IR, UV-vis, and 1H NMR spectroscopy. This new compound 3 displayed excellent selectivity towards Bi3 + ion in the presence of other competitive ions including Ca2 +, Cd2 +, Co2 + Cu2 +, Fe3 +, Hg2 +, Sn2 +, Mg2 +, Na+, Ni2 + and Pb2 + respectively. Upon addition of Bi3 + into the solution of compound 3 in DMSO, dramatic change was observed in the Q- and the B-bands in UV-visible spectra as a result of donor acceptor interactions. Reactive oxygen species (ROS) were also studied using 2,7-dichlorofluorescin diacetate (DCFH-DA) a fluorescent probe which is converted to highly fluorescent dichlorofluorescein (DCF) in the presence of ROS. This property of non-aggregating zinc phthalocyanine is promising as a photosensitizer in photodynamic therapy of cancer.

Ultraviolet-B radiation causes an upregulation of survivin in human keratinocytes and mouse skin.

PubMed

Aziz, Moammir Hasan; Ghotra, Amaninderapal S; Shukla, Yogeshwer; Ahmad, Nihal

2004-01-01

Understanding of the mechanism of ultraviolet (UV)-mediated cutaneous damages is far from complete. The cancer-specific expression of Survivin, a member of the inhibitor of apoptosis family of proteins, coupled with its importance in inhibiting cell death and in regulating cell division, makes it a target for cancer treatment. This study was designed to investigate the modulation of Survivin during UV response, both in vitro and in vivo. We used UV-B-mediated damages in normal human epidermal keratinocytes (NHEK) cells as an in vitro model and SKH-1 hairless mouse model for the in vivo studies. For in vitro studies, NHEK were treated with UV-B and samples were processed at 5, 15, 30 min, 1, 3, 6, 12 and 24 h after treatment. Our data demonstrated that UV-B exposure (50 mJ/cm2) to NHEK resulted in a significant upregulation in Survivin messenger RNA (mRNA) and protein levels. We also observed that UV-B exposure to NHEK resulted in significant (1) decrease in Smac/DIABLO and (2) increase in p53. For in vivo studies, the SKH-1 hairless mice were subjected to a single exposure of UV-B (180 mJ/cm2), and samples were processed at 3, 6, 12 and 24 h after UV-B exposure. UV-B treatment resulted in a significant increase in protein or mRNA levels (or both) of Survivin, phospho-Survivin and p53 and a concomitant decrease in Smac/DIABLO in mouse skin. This study demonstrated, for the first time, the involvement of Survivin (and the associated events) in UV-B response in vitro and in vivo in experimental models regarded to have relevance to human situations.

Monitoring the High-Energy Radiation Environment of Exoplanets Around Low-mass Stars with SPARCS (Star-Planet Activity Research CubeSat)

NASA Astrophysics Data System (ADS)

Shkolnik, Evgenya L.; Ardila, David; Barman, Travis; Beasley, Matthew; Bowman, Judd D.; Gorjian, Varoujan; Jacobs, Daniel; Jewell, April; Llama, Joe; Meadows, Victoria; Nikzad, Shouleh; Scowen, Paul; Swain, Mark; Zellem, Robert

2018-01-01

Roughly seventy-five billion M dwarfs in our galaxy host at least one small planet in the habitable zone (HZ). The stellar ultraviolet (UV) radiation from M dwarfs is strong and highly variable, and impacts planetary atmospheric loss, composition and habitability. These effects are amplified by the extreme proximity of their HZs (0.1–0.4 AU). Knowing the UV environments of M dwarf planets will be crucial to understanding their atmospheric composition and a key parameter in discriminating between biological and abiotic sources for observed biosignatures. The Star-Planet Activity Research CubeSat (SPARCS) will be a 6U CubeSat devoted to photometric monitoring of M stars in the far-UV and near-UV, measuring the time-dependent spectral slope, intensity and evolution of M dwarf stellar UV radiation. For each target, SPARCS will observe continuously over at least one complete stellar rotation (5 - 45 days). SPARCS will also advance UV detector technology by flying high quantum efficiency, UV-optimized detectors developed at JPL. These Delta-doped detectors have a long history of deployment demonstrating greater than five times the quantum efficiency of the detectors used by GALEX. SPARCS will pave the way for their application in missions like LUVOIR or HabEx, including interim UV-capable missions. SPARCS will also be capable of ‘target-of-opportunity’ UV observations for the rocky planets in M dwarf HZs soon to be discovered by NASA’s TESS mission, providing the needed UV context for the first habitable planets that JWST will characterize.Acknowledgements: Funding for SPARCS is provided by NASA’s Astrophysics Research and Analysis program, NNH16ZDA001N.

Reduction of patulin in apple juice products by UV light of different wavelengths in the UVC range.

PubMed

Zhu, Yan; Koutchma, Tatiana; Warriner, Keith; Zhou, Ting

2014-06-01

This study evaluated three UVC wavelengths (222, 254, and 282 nm) to degrade patulin introduced into apple juice or apple cider. The average UV fluences of 19.6, 84.3, 55.0, and 36.6 mJ·cm(-2) achieved through exposure to UV lamps at 222-, 254-, and 282-nm wavelengths and the combination of these wavelengths, respectively, resulted in 90% reduction of patulin in apple juice. Therefore, the order of efficiency of the three wavelength lamps was as follows: far UVC (222 nm) > far UVC plus (282 nm) > UVC (254 nm). In terms of color, treatment of apple juice with 222 nm resulted in an increase in the L* (lightness) value but decreases in a* (redness) and b* (yellowness) values, although the changes were insignificantly different from the values for nontreated controls based on a sensory evaluation. The ascorbic acid loss in juice treated at 222 nm to support 90% reduction of patulin was 36.5%, compared with ascorbic acid losses of 45.3 and 36.1% in samples treated at 254 and 282 nm, respectively. The current work demonstrated that the 222-nm wavelength possesses the highest efficiency for patulin reduction in apple juice when compared with the reductions by 254 and 282 nm, with no benefit gained from using a combination of wavelengths.

Topologically knotted deubiquitinases exhibit unprecedented mechanostability to withstand the proteolysis by an AAA+ protease.

PubMed

Sriramoju, Manoj Kumar; Chen, Yen; Lee, Yun-Tzai Cloud; Hsu, Shang-Te Danny

2018-05-04

More than one thousand knotted protein structures have been identified so far, but the functional roles of these knots remain elusive. It has been postulated that backbone entanglement may provide additional mechanostability. Here, we employed a bacterial proteasome, ClpXP, to mechanically unfold 5 2 -knotted human ubiquitin C-terminal hydrolase (UCH) paralogs from their C-termini, followed by processive translocation into the proteolytic chamber for degradation. Our results revealed unprecedentedly slow kinetics of ClpXP-mediated proteolysis for the proteasome-associated UCHL5: ten thousand times slower than that of a green fluorescence protein (GFP), which has a comparable size to the UCH domain but much higher chemical and thermal stabilities. The ClpXP-dependent mechanostability positively correlates with the intrinsic unfolding rates of the substrates, spanning over several orders of magnitude for the UCHs. The broad range of mechanostability within the same protein family may be associated with the functional requirements for their differential malleabilities.

Unprecedented pressure increase in deep magma reservoir triggered by lava-dome collapse

NASA Astrophysics Data System (ADS)

Voight, B.; Linde, A. T.; Sacks, I. S.; Mattioli, G. S.; Sparks, R. S. J.; Elsworth, D.; Hidayat, D.; Malin, P. E.; Shalev, E.; Widiwijayanti, C.; Young, S. R.; Bass, V.; Clarke, A.; Dunkley, P.; Johnston, W.; McWhorter, N.; Neuberg, J.; Williams, P.

2006-02-01

The collapse of the Soufrière Hills Volcano lava dome on Montserrat in July 2003 is the largest such event worldwide in the historical record. Here we report on borehole dilatometer data recording a remarkable and unprecedented rapid (~600s) pressurisation of a magma chamber, triggered by this surface collapse. The chamber expansion is indicated by an expansive offset at the near dilatometer sites coupled with contraction at the far site. By analyzing the strain data and using added constraints from experimental petrology and long-term edifice deformation from GPS geodesy, we prefer a source centered at approximately 6 km depth below the crater for an oblate spheroid with overpressure increase of order 1 MPa and average radius ~1 km. Pressurisation is attributed to growth of 1-3% of gas bubbles in supersaturated magma, triggered by the dynamics of surface unloading. Recent simulations demonstrate that pressure recovery from bubble growth can exceed initial pressure drop by nearly an order of magnitude.

Excision of thymine dimers in vitro by extracts of bacteriophage-infected Escherichia coli

DOE Office of Scientific and Technical Information (OSTI.GOV)

Friedberg, E.C.; Minton, K.; Pawl, G.

1974-05-01

Extracts of DNA polymerase I defective Escherichia coli infected with phage T4 contain an exonuclease activity that removes thymine dimers from uv- irradiated DNA previously nicked with T4 uv endonuclease. This activity is not expressed if cells are infected in the presence of chloramphenicol. The enzyme has a requirement for divalent cation and is not affected by caffeine, but excision is inhibited in the presence of proflavine. The enzyme is present in all phage T4 mutants thus far examined, including 25 uv-sensitive mutants isolated during the course of the experiments, all of which are defective in the v gene. Amore » similar activity can be detected in cells infected with phages T2, T3, and T6, but not in cells infected with phage T7. (auth)« less

LINKING EXPOSURE AND DOSIMETRY TO RISK FROM PHOTO-ACTIVATED TOXICITY OF PAHS

EPA Science Inventory

Hazard from photo-activation of PAHs has been well documented in aquatic organisms. Far less certain is the degree to which risk actually occurs in the field. One of the key difficulties in understanding this risk lies in quantifying exposure/dosimetry for both PAHs and UV radiat...

Physical Conditions in the Ultraviolet Absorbers of IRAS F22456-5125

NASA Astrophysics Data System (ADS)

Dunn, Jay P.; Crenshaw, D. Michael; Kraemer, S. B.; Trippe, M. L.

2010-04-01

We present the ultraviolet (UV) and X-ray spectra observed with the Far Ultraviolet Spectroscopic Explorer (FUSE) and the XMM-Newton satellite, respectively, of the low-z Seyfert 1 galaxy IRAS F22456 - 5125. This object shows absorption from five distinct, narrow kinematic components that span a significant range in velocity (~0 to -700 km s-1) and ionization (Lyman series, C III, N III, and O VI). We also show that three of the five kinematic components in these lines appear to be saturated in Lyβ λ1026 and that all five components show evidence of saturation in the O VI doublet lines λλ1032, 1038. Further, all five components show evidence for partial covering due to the absorption seen in the O VI doublet. This object is peculiar because it shows no evidence for corresponding X-ray absorption to the UV absorption in the X-ray spectrum, which violates the 1:1 correlation known for low-z active galactic nuclei (AGNs). We perform photoionization modeling of the UV absorption lines and predict that the O VII column density should be small, which would produce little to no absorption in agreement with the X-ray observation. We also examine the UV variability of the continuum flux for this object (an increase of a factor of 6). As the absorption components lack variability, we find a lower limit of ~20 kpc for the distance for the absorbers from the central AGN. Based on observations made with the NASA-CNES-CSA Far Ultraviolet Spectroscopic Explorer. FUSE is operated for NASA by the Johns Hopkins University under NASA contract NAS5-32985.

High throughput nanoimprint lithography for semiconductor memory applications

NASA Astrophysics Data System (ADS)

Ye, Zhengmao; Zhang, Wei; Khusnatdinov, Niyaz; Stachowiak, Tim; Irving, J. W.; Longsine, Whitney; Traub, Matthew; Fletcher, Brian; Liu, Weijun

2017-03-01

Imprint lithography is a promising technology for replication of nano-scale features. For semiconductor device applications, Canon deposits a low viscosity resist on a field by field basis using jetting technology. A patterned mask is lowered into the resist fluid which then quickly flows into the relief patterns in the mask by capillary action. Following this filling step, the resist is crosslinked under UV radiation, and then the mask is removed, leaving a patterned resist on the substrate. There are two critical components to meeting throughput requirements for imprint lithography. Using a similar approach to what is already done for many deposition and etch processes, imprint stations can be clustered to enhance throughput. The FPA-1200NZ2C is a four station cluster system designed for high volume manufacturing. For a single station, throughput includes overhead, resist dispense, resist fill time (or spread time), exposure and separation. Resist exposure time and mask/wafer separation are well understood processing steps with typical durations on the order of 0.10 to 0.20 seconds. To achieve a total process throughput of 17 wafers per hour (wph) for a single station, it is necessary to complete the fluid fill step in 1.2 seconds. For a throughput of 20 wph, fill time must be reduced to only one 1.1 seconds. There are several parameters that can impact resist filling. Key parameters include resist drop volume (smaller is better), system controls (which address drop spreading after jetting), Design for Imprint or DFI (to accelerate drop spreading) and material engineering (to promote wetting between the resist and underlying adhesion layer). In addition, it is mandatory to maintain fast filling, even for edge field imprinting. In this paper, we address the improvements made in all of these parameters to first enable a 1.20 second filling process for a device like pattern and have demonstrated this capability for both full fields and edge fields. Non-fill defectivity is well under 1.0 defects/cm2 for both field types. Next, by further reducing drop volume and optimizing drop patterns, a fill time of 1.1 seconds was demonstrated.

NASA Ames UV-LED Poster Overview

NASA Technical Reports Server (NTRS)

Jaroux, Belgacem Amar

2015-01-01

UV-LED is a small satellite technology demonstration payload being flown on the Saudisat-4 spacecraft that is demonstrating non-contacting charge control of an isolated or floating mass using new solid-state ultra-violet light emitting diodes (UV-LEDs). Integrated to the rest of the spacecraft and launched on a Dnepr in June 19, 2014, the project is a collaboration between the NASA Ames Research Center (ARC), Stanford University, and King Abdulaziz City for Science and Technology (KACST). Beginning with its commissioning in December, 2015, the data collected by UV-LED have validated a novel method of charge control that will improve the performance of drag-free spacecraft allowing for concurrent science collection during charge management operations as well as reduce the mass, power and volume required while increasing lifetime and reliability of a charge management subsystem. UV-LED continues to operate, exploring new concepts in non-contacting charge control and collecting data crucial to understanding the lifetime of ultra-violet light emitting diodes in space. These improvements are crucial to the success of ground breaking missions such as LISA and BBO, and demonstrates the ability of low cost small satellite missions to provide technological advances that far exceed mission costs.

Simultaneous Release and Labeling of O- and N-Glycans Allowing for Rapid Glycomic Analysis by Online LC-UV-ESI-MS/MS.

PubMed

Wang, Chengjian; Lu, Yu; Han, Jianli; Jin, Wanjun; Li, Lingmei; Zhang, Ying; Song, Xuezheng; Huang, Linjuan; Wang, Zhongfu

2018-05-24

Most glycoproteins and biological protein samples undergo both O- and N-glycosylation, making characterization of their structures very complicated and time-consuming. Nevertheless, to fully understand the biological functions of glycosylation, both the glycosylation forms need to be analyzed. Herein we report a versatile, convenient one-pot method in which O- and N-glycans are simultaneously released from glycoproteins and chromogenically labeled in situ and thus available for further characterization. In this procedure, glycoproteins are incubated with 1-phenyl-3-methyl-5-pyrazolone (PMP) in aqueous ammonium hydroxide, making O-glycans released from protein backbones by β-elimination and N-glycans liberated by alkaline hydrolysis. The released glycans are promptly derivatized with PMP in situ by Knoevenagel condensation and Michael addition, with peeling degradation almost completely prevented. The recovered mixture of O- and N-glycans as bis-PMP derivatives features strong ultraviolet (UV) absorbing ability and hydrophobicity, allowing for high-resolution chromatographic separation and high-sensitivity spectrometric detection. Using this technique, O- and N-glycans were simultaneously prepared from some model glycoproteins and complex biological samples, without significant peeling, desialylation, deacetylation, desulfation or other side-reactions, and then comprehensively analyzed by online HILIC-UV-ESI-MS/MS and RP-HPLC-UV-ESI-MS/MS, with which some novel O- and N-glycan structures were first found. This method provides a simple, versatile strategy for high-throughput glycomics analysis.

WDM mid-board optics for chip-to-chip wavelength routing interconnects in the H2020 ICT-STREAMS

NASA Astrophysics Data System (ADS)

Kanellos, G. T.; Pleros, N.

2017-02-01

Multi-socket server boards have emerged to increase the processing power density on the board level and further flatten the data center networks beyond leaf-spine architectures. Scaling however the number of processors per board puts current electronic technologies into challenge, as it requires high bandwidth interconnects and high throughput switches with increased number of ports that are currently unavailable. On-board optical interconnection has proved the potential to efficiently satisfy the bandwidth needs, but their use has been limited to parallel links without performing any smart routing functionality. With CWDM optical interconnects already a commodity, cyclical wavelength routing proposed to fit the datacom for rack-to-rack and board-to-board communication now becomes a promising on-board routing platform. ICT-STREAMS is a European research project that aims to combine WDM parallel on-board transceivers with a cyclical AWGR, in order to create a new board-level, chip-to-chip interconnection paradigm that will leverage WDM parallel transmission to a powerful wavelength routing platform capable to interconnect multiple processors with unprecedented bandwidth and throughput capacity. Direct, any-to-any, on-board interconnection of multiple processors will significantly contribute to further flatten the data centers and facilitate east-west communication. In the present communication, we present ICT-STREAMS on-board wavelength routing architecture for multiple chip-to-chip interconnections and evaluate the overall system performance in terms of throughput and latency for several schemes and traffic profiles. We also review recent advances of the ICT-STREAMS platform key-enabling technologies that span from Si in-plane lasers and polymer based electro-optical circuit boards to silicon photonics transceivers and photonic-crystal amplifiers.

Integrin αVβ5-mediated Removal of Apoptotic Cell Debris by the Eye Lens and Its Inhibition by UV Light Exposure*

PubMed Central

Chauss, Daniel; Brennan, Lisa A.; Bakina, Olga; Kantorow, Marc

2015-01-01

Accumulation of apoptotic material is toxic and associated with cataract and other disease states. Identification of mechanisms that prevent accumulation of apoptotic debris is important for establishing the etiology of these diseases. The ocular lens is routinely assaulted by UV light that causes lens cell apoptosis and is associated with cataract formation. To date, no molecular mechanism for removal of toxic apoptotic debris has been identified in the lens. Vesicular debris within lens cells exposed to UV light has been observed raising speculation that lens cells themselves could act as phagocytes to remove toxic apoptotic debris. However, phagocytosis has not been confirmed as a function of the intact eye lens, and no mechanism for lens phagocytosis has been established. Here, we demonstrate that the eye lens is capable of phagocytizing extracellular lens cell debris. Using high throughput RNA sequencing and bioinformatics analysis, we establish that lens epithelial cells express members of the integrin αVβ5-mediated phagocytosis pathway and that internalized cell debris co-localizes with αVβ5 and with RAB7 and Rab-interacting lysosomal protein that are required for phagosome maturation and fusion with lysosomes. We demonstrate that the αVβ5 receptor is required for lens epithelial cell phagocytosis and that UV light treatment of lens epithelial cells results in damage to the αVβ5 receptor with concomitant loss of phagocytosis. These data suggest that loss of αVβ5-mediated phagocytosis by the eye lens could result in accumulation of toxic cell debris that could contribute to UV light-induced cataract formation. PMID:26527683

Light-Regulated Polymerization under Near-Infrared/Far-Red Irradiation Catalyzed by Bacteriochlorophyll a.

PubMed

Shanmugam, Sivaprakash; Xu, Jiangtao; Boyer, Cyrille

2016-01-18

Photoregulated polymerizations are typically conducted using high-energy (UV and blue) light, which may lead to undesired side reactions. Furthermore, as the penetration of visible light is rather limited, the range of applications with such wavelengths is likewise limited. We herein report the first living radical polymerization that can be activated and deactivated by irradiation with near-infrared (NIR) and far-red light. Bacteriochlorophyll a (Bachl a) was employed as a photoredox catalyst for photoinduced electron transfer/reversible addition-fragmentation chain transfer (PET-RAFT) polymerization. Well-defined polymers were thus synthesized within a few hours under NIR (λ=850 nm) and far-red (λ=780 nm) irradiation with excellent control over the molecular weight (M(n)/M(w)<1.25). Taking advantage of the good penetration of NIR light, we showed that the polymerization also proceeded smoothly when a translucent barrier was placed between light source and reaction vessel. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Massively Parallel Rogue Cell Detection Using Serial Time-Encoded Amplified Microscopy of Inertially Ordered Cells in High-Throughput Flow

DTIC Science & Technology

2011-08-01

screening of budding yeast and detection of rare breast cancer cells in blood, our method should also be amenable to other applications in which high...to UV light with a power of 8.0 mW/cm2 through the transparency mask for 90 seconds. The wafer was baked again at 95°C for 4 minutes then developed...separated from the replica and sonicated in isopropanol for 5 minutes, sonicated in deionized H2O for 5 minutes, and baked at 65°C for at least 30

Periodic nanostructural materials for nanoplasmonics

NASA Astrophysics Data System (ADS)

Choi, Dukhyun

2017-02-01

Nanoscale periodic material design and fabrication are essentially fundamental requirement for basic scientific researches and industrial applications of nanoscience and engineering. Innovative, effective, reproducible, large-area uniform, tunable and robust nanostructure/material syntheses are still challenging. Here, I would like to introduce the novel periodic nanostructural materials particularly with uniformly ordered nanoporous or nanoflower structures, which are fabricated by simple, cost-effective, and high-throughput wet chemical methods. I also report large-area periodic plasmonic nanostructures based on template-based nanolithography. The surface morphology and optical properties are characterized by SEM and UV-vis. spectroscopy. Furthermore, their enhancement factor is evaluated by using SERS signals.

Lunar UV-visible-IR mapping interferometric spectrometer

NASA Technical Reports Server (NTRS)

Smith, W. Hayden; Haskin, L.; Korotev, R.; Arvidson, R.; Mckinnon, W.; Hapke, B.; Larson, S.; Lucey, P.

1992-01-01

Ultraviolet-visible-infrared mapping digital array scanned interferometers for lunar compositional surveys was developed. The research has defined a no-moving-parts, low-weight and low-power, high-throughput, and electronically adaptable digital array scanned interferometer that achieves measurement objectives encompassing and improving upon all the requirements defined by the LEXSWIG for lunar mineralogical investigation. In addition, LUMIS provides a new, important, ultraviolet spectral mapping, high-spatial-resolution line scan camera, and multispectral camera capabilities. An instrument configuration optimized for spectral mapping and imaging of the lunar surface and provide spectral results in support of the instrument design are described.

A Concept For A High Resolution Optical Lithographic System For Producing One-Half Micron Linewidths

NASA Astrophysics Data System (ADS)

Reynolds, George O.

1986-08-01

This paper describes a concept for developing an optical printer having a one-half micron linewidth capability to meet the pro-jected needs of future Integrated Circuit (IC) production facilities. Our approach for meeting this objective is to combine the appro-priate features of the current 1:1 reflective optical printers with the stepping characteristic of the 10:1 refractive optical systems. The proposed, very deep, UV step and repeat system has the potential of reaching a one-half micron linewidth production goal entirely with optical technology. The key subsystem elements necessary to achieve these goals are discussed. These subsystems include a reflective optical system, a 10:1 stepper configuration having a linearity limit of 0.5 microns and an FOV of 15 mm, a deep UV laser source, photoresists having the required sensitivity, an alignment capability of 500 Å , a focal sensor having a 500 Å tolerance and the associated mechanical, electronic and environmental controls compatible with a produc-tion throughput of 60-four inch wafers/hour.

High-performance, low-cost solar collectors for disinfection of contaminated water.

PubMed

Vidal, A; Diaz, A I

2000-01-01

Although the germicidal action of sunlight has long been recognized, its potential for practical applications has to be researched more thoroughly. This paper summarizes the progress made toward a commercially practical collector for solar disinfection applications. Nontracking compound parabolic collectors (CPCs), developed originally for capturing solar photons for thermal energy applications, were examined as potential solar photoreactors. A field demonstration of solar disinfection treatment using commercially manufactured solar reactors was conducted. Field tests showed successful destruction of Escherichia coli and Enterococcus faecalis and have provided data for full-scale design of water treatment systems. From above observations, a throughput value of 50 L/m2 h for the low-cost CPC reactor tested was estimated. For a 190 m3/d (0.05 MGD) facility, the estimated total costs for disinfection using UV-A is U.S. $0.19/m3 ($0.70/1000 gal). The use of near-UV sunlight to disinfect water supplies seems promising in rural communities of developing countries where treated water is unavailable.

An improved UHPLC-UV method for separation and quantification of carotenoids in vegetable crops.

PubMed

Maurer, Megan M; Mein, Jonathan R; Chaudhuri, Swapan K; Constant, Howard L

2014-12-15

Carotenoid identification and quantitation is critical for the development of improved nutrition plant varieties. Industrial analysis of carotenoids is typically carried out on multiple crops with potentially thousands of samples per crop, placing critical needs on speed and broad utility of the analytical methods. Current chromatographic methods for carotenoid analysis have had limited industrial application due to their low throughput, requiring up to 60 min for complete separation of all compounds. We have developed an improved UHPLC-UV method that resolves all major carotenoids found in broccoli (Brassica oleracea L. var. italica), carrot (Daucus carota), corn (Zea mays), and tomato (Solanum lycopersicum). The chromatographic method is completed in 13.5 min allowing for the resolution of the 11 carotenoids of interest, including the structural isomers lutein/zeaxanthin and α-/β-carotene. Additional minor carotenoids have also been separated and identified with this method, demonstrating the utility of this method across major commercial food crops. Copyright © 2014 Elsevier Ltd. All rights reserved.

Dissecting the IRX-β dust attenuation relation: exploring the physical origin of observed variations in galaxies

NASA Astrophysics Data System (ADS)

Popping, Gergö; Puglisi, Annagrazia; Norman, Colin A.

2017-12-01

The use of ultraviolet (UV) emission as a tracer of galaxy star formation rate (SFR) is hampered by dust obscuration. The empirical relationship between UV-slope, β, and the ratio between far-infrared and UV luminosity, IRX, is commonly employed to account for obscured UV emission. We present a simple model that explores the physical origin of variations in the IRX-β dust attenuation relation. A relative increase in FUV compared to NUV attenuation and an increasing stellar population age cause variations towards red UV-slopes for a fixed IRX. Dust geometry effects (turbulence, dust screen with holes, mixing of stars within the dust screen, two-component dust model) cause variations towards blue UV-slopes. Poor photometric sampling of the UV spectrum causes additional observational variations. We provide an analytic approximation for the IRX-β relation invoking a subset of the explored physical processes (dust type, stellar population age, turbulence). We discuss observed variations in the IRX-β relation for local (sub-galactic scales) and high-redshift (normal and dusty star-forming galaxies, galaxies during the epoch of reionization) galaxies in the context of the physical processes explored in our model. High spatial resolution imaging of the UV and sub-mm emission of galaxies can constrain the IRX-β dust attenuation relation for different galaxy types at different epochs, where different processes causing variations may dominate. These constraints will allow the use of the IRX-β relation to estimate intrinsic SFRs of galaxies, despite the lack of a universal relation.

EVIDENCE FOR A WIDE RANGE OF ULTRAVIOLET OBSCURATION IN z {approx} 2 DUSTY GALAXIES FROM THE GOODS-HERSCHEL SURVEY

DOE Office of Scientific and Technical Information (OSTI.GOV)

Penner, Kyle; Dickinson, Mark; Dey, Arjun

Dusty galaxies at z {approx} 2 span a wide range of relative brightness between rest-frame mid-infrared (8 {mu}m) and ultraviolet wavelengths. We attempt to determine the physical mechanism responsible for this diversity. Dust-obscured galaxies (DOGs), which have rest-frame mid-IR to UV flux density ratios {approx}> 1000, might be abnormally bright in the mid-IR, perhaps due to prominent emission from active galactic nuclei and/or polycyclic aromatic hydrocarbons, or abnormally faint in the UV. We use far-infrared data from the GOODS-Herschel survey to show that most DOGs with 10{sup 12} L {sub Sun} {approx}< L {sub IR} {approx}< 10{sup 13} L {submore » Sun} are not abnormally bright in the mid-IR when compared to other dusty galaxies with similar IR (8-1000 {mu}m) luminosities. We observe a relation between the median IR to UV luminosity ratios and the median UV continuum power-law indices for these galaxies, and we find that only 24% have specific star formation rates that indicate the dominance of compact star-forming regions. This circumstantial evidence supports the idea that the UV- and IR-emitting regions in these galaxies are spatially coincident, which implies a connection between the abnormal UV faintness of DOGs and dust obscuration. We conclude that the range in rest-frame mid-IR to UV flux density ratios spanned by dusty galaxies at z {approx} 2 is due to differing amounts of UV obscuration. Of galaxies with these IR luminosities, DOGs are the most obscured. We attribute differences in UV obscuration to either (1) differences in the degree of alignment between the spatial distributions of dust and massive stars or (2) differences in the total dust content.« less

The role of coccoliths in protecting Emiliania huxleyi against stressful light and UV radiation

NASA Astrophysics Data System (ADS)

Xu, Juntian; Bach, Lennart T.; Schulz, Kai G.; Zhao, Wenyan; Gao, Kunshan; Riebesell, Ulf

2016-08-01

Coccolithophores are a group of phytoplankton species which cover themselves with small scales (coccoliths) made of calcium carbonate (CaCO3). The reason why coccolithophores form these calcite platelets has been a matter of debate for decades but has remained elusive so far. One hypothesis is that they play a role in light or UV protection, especially in surface dwelling species like Emiliania huxleyi, which can tolerate exceptionally high levels of solar radiation. In this study, we tested this hypothesis by culturing a calcified and a naked strain under different light conditions with and without UV radiation. The coccoliths of E. huxleyi reduced the transmission of visible radiation (400-700 nm) by 7.5 %, that of UV-A (315-400 nm) by 14.1 % and that of UV-B (280-315 nm) by 18.4 %. Growth rates of the calcified strain (PML B92/11) were about 2 times higher than those of the naked strain (CCMP 2090) under indoor constant light levels in the absence of UV radiation. When exposed to outdoor conditions (fluctuating sunlight with UV radiation), growth rates of calcified cells were almost 3.5 times higher compared to naked cells. Furthermore, the relative electron transport rate was 114 % higher and non-photochemical quenching (NPQ) was 281 % higher in the calcified compared to the naked strain, implying higher energy transfer associated with higher NPQ in the presence of calcification. When exposed to natural solar radiation including UV radiation, the maximal quantum yield of photosystem II was only slightly reduced in the calcified strain but strongly reduced in the naked strain. Our results reveal an important role of coccoliths in mitigating light and UV stress in E. huxleyi.

GALEX: a UV telescope to map the star formation history of the universe

NASA Astrophysics Data System (ADS)

Milliard, Bruno; Grange, Robert; Martin, Christopher; Schiminovich, David

2017-11-01

The NASA Small Mission EXplorer GALEX (PI: C.Martin, Caltech) is under development at JPL for launch late 2001. It has been designed to map the history of star formation in the Universe over the redshift range 0-2, a major era where galaxies and gas content evolved dramatically. The expected depth and imaging quality matches the Palomar Observatory Surveys, allowing GALEX to provide the astronomical community with a database of FUV photometric and spectroscopic observations of several million galaxies in the nearby and distant Universe. The 1.24 degree FOV, 50 cm aperture compact Ritchey-Chrétien telescope is equipped with two 65 mm photon-counting detectors. It will perform several surveys of different coverage and depths, that will take advantage of a high throughput UV-transmissive Grism newly developed in France to easily switch between imagery and field spectroscopy modes. A thin aspherized fused silica dichroic component provides simultaneous observations in two UV bands (135-185 nm and 185-300 nm) as well as correction for field aberrations. We shall briefly present the mission science goals, and will describe the optical concept, along with the guidelines and compromises used for its optimization in the context of the "Faster, Better, Cheaper" NASA philosophy, and give a brief development status report.

The Potential for Cubesats to Determine Black Holes Masses in Nearby Active Galactic Nuclei and Contribute to Other Time Domain Science

NASA Astrophysics Data System (ADS)

Gorjian, Varoujan; Ardila, David R.; Barth, Aaron J.; Janson, Siegfried; Kochanek, Christopher S.; Malkan, Matthew Arnold; Peterson, Bradley M.; Rowen, Darren; Seager, Sara; Shkolnik, Evgenya L.

2016-01-01

A 3U (30cmx10cmx10cm) CubeSat with a 9cm diameter aperture telescope can deliver unprecedented time domain coverage in the ultraviolet (UV) for the purposes of Active Galactic Nucleus (AGN) reverberation mapping to determine supermassive black hole (SMBH) masses. SMBH's reside at the centers of most, if not all, massive galaxies and accretion onto those black holes generates a great deal of emission peaking in the UV. These accretion disks are also surrounded by a nearby, fast moving gas region called the Broad Line Region (BLR). As light pulses generated near the black hole spread out, they first illuminate the accretion disk, and then the BLR. For a sample of bright AGN, a dedicated cubesat can follow these changes in brightness on a daily basis for up to 100 days from low Earth orbit. With such monitoring of changes in the accretion disk and then the BLR, an accurate distance between the two regions can be determined. Combining this UV coverage with optical emission-line spectroscopy from the ground allows for a direct measurement of the mass of the central black hole. This exchange of time resolution for spatial resolution can also be used to determine the structure of the central region of the AGN. Ground-based photometric and spectroscopic measurements will complement the UV by tracing the optically emitting and hence cooler regions of the AGN to provide one of the best measurements of supermassive black hole masses.In addition to the primary science mission, the long observing campaigns and the large field of view required to get comparison stars for relative photometry allow for other competitive science. We have identified UV activity in M dwarfs as ancillary science that can be addressed with such a cubesat. This activity will have a strong impact on the habitability of any possible planet around the star.

The USGS World Energy Program

USGS Publications Warehouse

Ahlbrandt, Thomas S.

1997-01-01

The world has recently experienced rapid change to market-driven economies and increasing reliance on petroleum supplies from areas of political instability. The interplay of unprecedented growth of the global population, increasing worldwide energy demand, and political instability in two major petroleum exporting regions (the former Soviet Union and the Middle East) requires that the United States maintains a current, reliable, objective assessment of the world's energy resources. The need is compounded by the environmental implications of rapid increases in coal use in the Far East and international pressure on consumption of fossil fuels.

Volunteers: A Critical Element in the New AGU

NASA Astrophysics Data System (ADS)

McPhaden, Michael

2010-02-01

We are in the midst of unprecedented change at the American Geophysical Union. Members have recently approved new bylaws to create a governance structure that better reflects the Union's diverse range of scientific interests and enables more efficient and transparent functioning of the organization. We have also embarked on a new strategic planning process to develop far-reaching organizational goals that will ensure continued global leadership in the Earth and space sciences. Finally, we are in the midst of hiring a new permanent executive director to lead our organization in the years ahead.

Integrated Solar System Exploration Education and Public Outreach: Theme, Products and Activities

NASA Technical Reports Server (NTRS)

Lowes, Leslie; Lindstrom, Marilyn; Stockman, Stephanie; Scalice, Daniela; Allen, Jaclyn; Tobola, Kay; Klug, Sheri; Harmon, Art

2004-01-01

NASA's Solar System Exploration Program is entering an unprecedented period of exploration and discovery. Its goal is to understand the origin and evolution of the solar system and life within it. SSE missions are operating or in development to study the far reaches of our solar system and beyond. These missions proceed in sequence for each body from reconnaissance flybys through orbiters and landers or rovers to sample returns. SSE research programs develop new instruments, analyze mission data or returned samples, and provide experimental or theoretical models to aid in interpretation.

Vesta's UV Lightcurve: Hemispheric Variation in Brightness and Spectral Reversal

NASA Technical Reports Server (NTRS)

Hendrix, Amanda R.; Vilas, Faith; Festou, Michael

2003-01-01

Spectra of asteroid 4 Vesta obtained in October 1990 with the International Ultraviolet Explorer are reanalyzed and reinterpreted. A large portion of the eastern hemisphere (based on the prime meridian definition of Thomas et al., 1997a) is darker at UV Wavelengths than much of the western hemisphere. The UV lightcurve is in contrast with the visible lightcurve, which shows that the eastern hemisphere is brighter than the western. These IUE spectra of Vesta thus may be evidence for the "spectral reversal." first seen on the Moon by Apollo 17. where the visibly brighter lunar highlands are darker than the maria at far-UV wavelengths. This effect was linked to space weathering when it was noted (Wagner et al., 1987) that the spectral reversal appears in the laboratory spectra of lunar soils but not powdered lunar rocks. We investigate Vesta's UV lightcurve and spectral reversal, and its possible connection with space weathering. The addition to grain coatings of small amounts of submicroscopic iron (SMFe) through vapor deposition causes drastic spectral changes at UV-visible wavelengths (Hapke, 2001). while the longer wavelength spectrum remains largely unaffected. Other laboratory results (e.g., Hiroi and Pieters, 1998) indicate that the UV-visible wavelength range is affected by simulated weathering processes in a manner similar to what is seen on Vesta. It is likely that Vesta has experienced relatively minor amounts of space weathering, as indicated by the spectral reversal, along with the subtle visible-near infrared weathering effects (e.g., Binzel et al., 1997).

207-nm UV Light - A Promising Tool for Safe Low-Cost Reduction of Surgical Site Infections. I: In Vitro Studies

PubMed Central

Buonanno, Manuela; Randers-Pehrson, Gerhard; Bigelow, Alan W.; Trivedi, Sheetal; Lowy, Franklin D.; Spotnitz, Henry M.; Hammer, Scott M.; Brenner, David J.

2013-01-01

Background 0.5% to 10% of clean surgeries result in surgical-site infections, and attempts to reduce this rate have had limited success. Germicidal UV lamps, with a broad wavelength spectrum from 200 to 400 nm are an effective bactericidal option against drug-resistant and drug-sensitive bacteria, but represent a health hazard to patient and staff. By contrast, because of its limited penetration, ∼200 nm far-UVC light is predicted to be effective in killing bacteria, but without the human health hazards to skin and eyes associated with conventional germicidal UV exposure. Aims The aim of this work was to test the biophysically-based hypothesis that ∼200 nm UV light is significantly cytotoxic to bacteria, but minimally cytotoxic or mutagenic to human cells either isolated or within tissues. Methods A Kr-Br excimer lamp was used, which produces 207-nm UV light, with a filter to remove higher-wavelength components. Comparisons were made with results from a conventional broad spectrum 254-nm UV germicidal lamp. First, cell inactivation vs. UV fluence data were generated for methicillin-resistant S. aureus (MRSA) bacteria and also for normal human fibroblasts. Second, yields of the main UV-associated pre-mutagenic DNA lesions (cyclobutane pyrimidine dimers and 6-4 photoproducts) were measured, for both UV radiations incident on 3-D human skin tissue. Results We found that 207-nm UV light kills MRSA efficiently but, unlike conventional germicidal UV lamps, produces little cell killing in human cells. In a 3-D human skin model, 207-nm UV light produced almost no pre-mutagenic UV-associated DNA lesions, in contrast to significant yields induced by a conventional germicidal UV lamp. Conclusions As predicted based on biophysical considerations, 207-nm light kills bacteria efficiently but does not appear to be significantly cytotoxic or mutagenic to human cells. Used appropriately, 207-nm light may have the potential for safely and inexpensively reducing surgical-site infection rates, including those of drug-resistant origin. PMID:24146947

Butterfly wing coloration studied with a novel imaging scatterometer

NASA Astrophysics Data System (ADS)

Stavenga, Doekele

2010-03-01

Animal coloration functions for display or camouflage. Notably insects provide numerous examples of a rich variety of the applied optical mechanisms. For instance, many butterflies feature a distinct dichromatism, that is, the wing coloration of the male and the female differ substantially. The male Brimstone, Gonepteryx rhamni, has yellow wings that are strongly UV iridescent, but the female has white wings with low reflectance in the UV and a high reflectance in the visible wavelength range. In the Small White cabbage butterfly, Pieris rapae crucivora, the wing reflectance of the male is low in the UV and high at visible wavelengths, whereas the wing reflectance of the female is higher in the UV and lower in the visible. Pierid butterflies apply nanosized, strongly scattering beads to achieve their bright coloration. The male Pipevine Swallowtail butterfly, Battus philenor, has dorsal wings with scales functioning as thin film gratings that exhibit polarized iridescence; the dorsal wings of the female are matte black. The polarized iridescence probably functions in intraspecific, sexual signaling, as has been demonstrated in Heliconius butterflies. An example of camouflage is the Green Hairstreak butterfly, Callophrys rubi, where photonic crystal domains exist in the ventral wing scales, resulting in a matte green color that well matches the color of plant leaves. The spectral reflection and polarization characteristics of biological tissues can be rapidly and with unprecedented detail assessed with a novel imaging scatterometer-spectrophotometer, built around an elliptical mirror [1]. Examples of butterfly and damselfly wings, bird feathers, and beetle cuticle will be presented. [4pt] [1] D.G. Stavenga, H.L. Leertouwer, P. Pirih, M.F. Wehling, Optics Express 17, 193-202 (2009)

Beta-Carotene chemical stability in nanoemulsions was improved by stabilized with Beta-Lactoglobulin-Catechin conjugates through free radical method

USDA-ARS?s Scientific Manuscript database

Beta-lactoglobulin (BLG)-catechin conjugates were prepared by a free radical method and investigated with sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE), electrospray ionization-mass spectrometry (ESI-MS), and far-UV circular dichroism (CD). Covalent binding between BLG and cat...

Combined advanced finishing and UV laser conditioning process for producing damage resistant optics

DOEpatents

Menapace, Joseph A.; Peterson, John E.; Penetrante, Bernardino M.; Miller, Philip E.; Parham, Thomas G.; Nichols, Michael A.

2005-07-26

A method for reducing the density of sites on the surface of fused silica optics that are prone to the initiation of laser-induced damage, resulting in optics which have far fewer catastrophic defects, and are better capable of resisting optical deterioration upon exposure to a high-power laser beam.

Imidazolium tagged acridines: Synthesis, characterization and applications in DNA binding and anti-microbial activities

NASA Astrophysics Data System (ADS)

Raju, Gembali; Vishwanath, S.; Prasad, Archana; Patel, Basant K.; Prabusankar, Ganesan

2016-03-01

New water soluble 4,5-bis imidazolium tagged acridines have been synthesized and structurally characterized by multinuclear NMR and single crystal X-ray diffraction techniques. The DNA binding and anti-microbial activities of these acridine derivatives were investigated by fluorescence and far-UV circular dichroism studies.

Detection of an ultraviolet and visible counterpart of the NGC 6624 X-ray burster

NASA Technical Reports Server (NTRS)

King, I. R.; Stanford, S. A.; Albrecht, R.; Barbieri, C.; Blades, J. C.; Boksenberg, A.; Crane, P.; Disney, M. J.; Deharveng, J. M.; Jakobsen, P.

1993-01-01

We have detected, in images taken with the HST FOC, the UV and optical counterpart of the X-ray source 4U 1820-30 in the globular cluster NGC 6624. Astrometric measurements place this object 2 sigma from the X-ray position of 4U 1820-30. The source dominates a far-UV FOC image and has the same flux at 1400 A as was seen through the large IUE aperture by Rich et al. (1993). It has a B magnitude of 18.7 but is not detected in V. It is 0.66 arcsec from the center of NGC 6624, a fact that may change the interpretation of the P-average of the 11 minute binary orbit. The flux drops between 1400 and 4300 A at a rate that is nearly as steep as that of a Rayleigh-Jeans curve. The flux is far too large to come from the neutron star directly but could accord with radiation from a heated accretion disk and/or the heated side of the companion star.

Preservation of far-UV aluminum reflectance by means of overcoating with C60 films.

PubMed

Méndez, J A; Larruquert, J I; Aznárez, J A

2000-01-01

Thin films of C(60) were investigated as protective coatings of Al films to preserve their far-UV (FUV) reflectance by inhibition or retardation of their oxidation. Two methods were used for the overcoating of Al films with approximately one monolayer of C(60): (1) deposition of a multilayer film followed by temperature desorption of all but one monolayer and (2) direct deposition of approximately one-monolayer film. We exposed both types of sample to controlled doses of molecular oxygen and water vapor and measured their FUV reflectance before and after exposure to evaluate the achieved protection on the Al films. The whole process of sample preparation, reflectance measurement, sample heating, and oxidation was made without breaking vacuum. Results show that a C(60) monolayer protected Al from oxidation to some extent, although FUV reflectance of unprotected Al films was never exceeded. FUV optical constants of C(60) films and the FUV reflectance of the C(60) film as deposited and as a function of exposure to O(2) were also measured.

Observations of molecular and atomic gas in photodissociation regions. [interstellar chemistry

NASA Technical Reports Server (NTRS)

Jaffe, D. T.; Howe, J. E.

1989-01-01

Dense gas at the ionized/neutral boundaries of molecular clouds illuminated by far-UV photons plays an important role in the appearance of the neutral interstellar medium. It also is a laboratory for the study of UV-photochemistry and of a number of heating and cooling phenomena not seen elsewhere. Fine structure lines of neutral and low ionization potential species dominate the cooling in the outer part of the photodissociation regions. Observations of these lines show that the regions are dense and highly clumped. Observations of H2 and CO show that heating by UV photons plays a significant role in the excitation of molecular lines near the H II/neutral boundary. Warm CO is more abundant in these regions than predicted by the standard theoretical models. Optical reflection nebulas provide an ideal laboratory for the study of photodissocciation region phenomena.

In Charon's Shadow: Analysis of the UV Solar Occultation from New Horizons

NASA Astrophysics Data System (ADS)

Kammer, Joshua A.; Stern, S. A.; Weaver, H. A.; Young, L. A.; Ennico, K. A.; Olkin, C. B.; Gladstone, G. R.; Summers, M. E.; Greathouse, T. K.; Retherford, K. D.; Versteeg, M. H.; Parker, J. W.; Steffl, A. J.; Schindhelm, E.; Strobel, D. F.; Linscott, I. R.; Hinson, D. P.; Tyler, G. L.; Woods, W. W.

2015-11-01

Observations of Charon, Pluto's largest moon, have so far yielded no evidence for a substantial atmosphere. However, during the flyby of New Horizons through the Pluto-Charon system, the Alice ultraviolet spectrograph successfully acquired the most sensitive measurements to date during an occultation of the sun as New Horizons passed through Charon's shadow. These observations include wavelength coverage in the extreme- and far-ultraviolet (EUV and FUV) from 52 nm to 187 nm. We will present these results from Alice, and discuss their implications for an atmosphere on Charon.This work was supported by NASA's New Horizons project.

STS-39 AFP-675 and STP-1 MPESS in OV-103's payload bay (PLB)

NASA Image and Video Library

1991-05-06

STS039-10-019 (28 April-6 May 1991) --- This 35mm frame, taken from inside the crew cabin, shows some of the cargo in Discovery's payload bay. Seen are the tops of canisters on the STP-1 payload, configured on the STS 39 Hitchhiker carrier; and the Air Force Program (AFP) 675 package. AFP-675 consists of the Cryogenic Infrared Radiance Instrumentation for Shuttle (CIRRIS)-1A; Far Ultraviolet Camera (FAR-UV) Experiment; Horizon Ultraviolet Program (HUP); Quadruple Ion Neutral Mass Spectrometer (QINMS); and the Uniformly Redundant Array (URA).

STS-39 OV-103 reaction control system (RCS) jets fire during onorbit maneuver

NASA Image and Video Library

1991-05-06

STS039-27-016 (28 April-6 May 1991) --- The Space Shuttle Discovery fires reaction control subsystem (RCS) thrusters in this 35mm frame, taken from inside the crew cabin. Seen in Discovery's payload bay are the tops of cannisters on the STP-1 payload, configured on the STS 39 Hitchhiker carrier; and the Air Force Program (AFP) 675 package. AFP-675 consists of the Cryogenic Infrared Radiance Instrumentation for Shuttle (CIRRIS)-1A; Far Ultraviolet Camera (FAR-UV) Experiment; Horizon Ultraviolet Program (HUP); Quadruple Ion Neutral Mass Spectrometer (QINMS); and the Uniformly Redundant Array (URA).

Durable silver mirror with ultra-violet thru far infra-red reflection

DOEpatents

Wolfe, Jesse D.

2010-11-23

A durable highly reflective silver mirror characterized by high reflectance in a broad spectral range of about 300 nm in the UV to the far infrared (.about.10000 nm), as well as exceptional environmental durability. A high absorptivity metal underlayer is used which prevents the formation of a galvanic cell with a silver layer while increasing the reflectance of the silver layer. Environmentally durable overcoat layers are provided to enhance mechanical and chemical durability and protect the silver layer from corrosion and tarnishing, for use in a wide variety of surroundings or climates, including harsh or extreme environments.

Epidermal Rac1 regulates the DNA damage response and protects from UV-light-induced keratinocyte apoptosis and skin carcinogenesis

PubMed Central

Deshmukh, Jayesh; Pofahl, Ruth; Haase, Ingo

2017-01-01

Non-melanoma skin cancer (NMSC) is the most common type of cancer. Increased expression and activity of Rac1, a small Rho GTPase, has been shown previously in NMSC and other human cancers; suggesting that Rac1 may function as an oncogene in skin. DMBA/TPA skin carcinogenesis studies in mice have shown that Rac1 is required for chemically induced skin papilloma formation. However, UVB radiation by the sun, which causes DNA damage, is the most relevant cause for NMSC. A potential role of Rac1 in UV-light-induced skin carcinogenesis has not been investigated so far. To investigate this, we irradiated mice with epidermal Rac1 deficiency (Rac1-EKO) and their controls using a well-established protocol for long-term UV-irradiation. Most of the Rac1-EKO mice developed severe skin erosions upon long-term UV-irradiation, unlike their controls. These skin erosions in Rac1-EKO mice healed subsequently. Surprisingly, we observed development of squamous cell carcinomas (SCCs) within the UV-irradiation fields. This shows that the presence of Rac1 in the epidermis protects from UV-light-induced skin carcinogenesis. Short-term UV-irradiation experiments revealed increased UV-light-induced apoptosis of Rac1-deficient epidermal keratinocytes in vitro as well as in vivo. Further investigations using cyclobutane pyrimidine dimer photolyase transgenic mice revealed that the observed increase in UV-light-induced keratinocyte apoptosis in Rac1-EKO mice is DNA damage dependent and correlates with caspase-8 activation. Furthermore, Rac1-deficient keratinocytes showed reduced levels of p53, γ-H2AX and p-Chk1 suggesting an attenuated DNA damage response upon UV-irradiation. Taken together, our data provide direct evidence for a protective role of Rac1 in UV-light-induced skin carcinogenesis and keratinocyte apoptosis probably through regulating mechanisms of the DNA damage response and repair pathways. PMID:28277539

Optical system design of solar-blind UV target simulator with long focal length

NASA Astrophysics Data System (ADS)

Chen, Yu; Huo, Furong; Zheng, Liqin

2014-11-01

Ultraviolet (UV) radiation of 200nm-300nm waveband from the sun is absorbed by atmosphere, which is often referred to the solar-blind region of the solar spectrum. Solar-blind characteristics of this waveband have important application value, especially in military fields. The application of solar-blind waveband has developed very rapidly, which is receiving more and more attention. Sometimes, to test the performance of a UV optical system, a standard solar-blind UV target simulator is needed as the UV light source. In this paper, an optical system of a solar-blind UV target simulator is designed with waveband 240nm-280nm. To simulate a far UV target, the focal length of this UV optical system needs to be long. Besides, different field of view (FOV) of the system should meet aplanatic condition. The optional materials are very few for UV optical systems, in which only CaF2 and JGS1 are commonly used. Various aberrations are difficult to be corrected. To save production cost and enhance the precision of fabrication and test, aspheric surfaces and binary elements are not adopted in the system. Moreover, doublet or triplet cannot be used in UV optical system considering possible cracking for different thermal expansion coefficients of different materials. After optimization, the system is composed of 4 lenses with focal length 500mm. MTF curves of different FOV coincide together. The maximum RMS radius of the optimized system has almost the same size as Airy disk, which proves the good image quality after system optimization. The aplanatic condition is met very well in this system. In the spot diagram, root mean square (RMS) radius changes from 3 microns to 3.6 microns, which has similar size with Airy disk and meets aplanatic condition very well. This optical system of solar-blind UV target simulator also has relatively loose tolerance data, which can prove the system is designed in an optimal state.

UV-Light Exposure of Insulin: Pharmaceutical Implications upon Covalent Insulin Dityrosine Dimerization and Disulphide Bond Photolysis

PubMed Central

Correia, Manuel; Neves-Petersen, Maria Teresa; Jeppesen, Per Bendix; Gregersen, Søren; Petersen, Steffen B.

2012-01-01

In this work we report the effects of continuous UV-light (276 nm, ∼2.20 W.m−2) excitation of human insulin on its absorption and fluorescence properties, structure and functionality. Continuous UV-excitation of the peptide hormone in solution leads to the progressive formation of tyrosine photo-product dityrosine, formed upon tyrosine radical cross-linkage. Absorbance, fluorescence emission and excitation data confirm dityrosine formation, leading to covalent insulin dimerization. Furthermore, UV-excitation of insulin induces disulphide bridge breakage. Near- and far-UV-CD spectroscopy shows that UV-excitation of insulin induces secondary and tertiary structure losses. In native insulin, the A and B chains are held together by two disulphide bridges. Disruption of either of these bonds is likely to affect insulin’s structure. The UV-light induced structural changes impair its antibody binding capability and in vitro hormonal function. After 1.5 and 3.5 h of 276 nm excitation there is a 33.7% and 62.1% decrease in concentration of insulin recognized by guinea pig anti-insulin antibodies, respectively. Glucose uptake by human skeletal muscle cells decreases 61.7% when the cells are incubated with pre UV-illuminated insulin during 1.5 h. The observations presented in this work highlight the importance of protecting insulin and other drugs from UV-light exposure, which is of outmost relevance to the pharmaceutical industry. Several drug formulations containing insulin in hexameric, dimeric and monomeric forms can be exposed to natural and artificial UV-light during their production, packaging, storage or administration phases. We can estimate that direct long-term exposure of insulin to sunlight and common light sources for indoors lighting and UV-sterilization in industries can be sufficient to induce irreversible changes to human insulin structure. Routine fluorescence and absorption measurements in laboratory experiments may also induce changes in protein structure. Structural damage includes insulin dimerization via dityrosine cross-linking or disulphide bond disruption, which affects the hormone’s structure and bioactivity. PMID:23227203

UV-light exposure of insulin: pharmaceutical implications upon covalent insulin dityrosine dimerization and disulphide bond photolysis.

PubMed

Correia, Manuel; Neves-Petersen, Maria Teresa; Jeppesen, Per Bendix; Gregersen, Søren; Petersen, Steffen B

2012-01-01

In this work we report the effects of continuous UV-light (276 nm, ~2.20 W.m(-2)) excitation of human insulin on its absorption and fluorescence properties, structure and functionality. Continuous UV-excitation of the peptide hormone in solution leads to the progressive formation of tyrosine photo-product dityrosine, formed upon tyrosine radical cross-linkage. Absorbance, fluorescence emission and excitation data confirm dityrosine formation, leading to covalent insulin dimerization. Furthermore, UV-excitation of insulin induces disulphide bridge breakage. Near- and far-UV-CD spectroscopy shows that UV-excitation of insulin induces secondary and tertiary structure losses. In native insulin, the A and B chains are held together by two disulphide bridges. Disruption of either of these bonds is likely to affect insulin's structure. The UV-light induced structural changes impair its antibody binding capability and in vitro hormonal function. After 1.5 and 3.5 h of 276 nm excitation there is a 33.7% and 62.1% decrease in concentration of insulin recognized by guinea pig anti-insulin antibodies, respectively. Glucose uptake by human skeletal muscle cells decreases 61.7% when the cells are incubated with pre UV-illuminated insulin during 1.5 h. The observations presented in this work highlight the importance of protecting insulin and other drugs from UV-light exposure, which is of outmost relevance to the pharmaceutical industry. Several drug formulations containing insulin in hexameric, dimeric and monomeric forms can be exposed to natural and artificial UV-light during their production, packaging, storage or administration phases. We can estimate that direct long-term exposure of insulin to sunlight and common light sources for indoors lighting and UV-sterilization in industries can be sufficient to induce irreversible changes to human insulin structure. Routine fluorescence and absorption measurements in laboratory experiments may also induce changes in protein structure. Structural damage includes insulin dimerization via dityrosine cross-linking or disulphide bond disruption, which affects the hormone's structure and bioactivity.

Epidermal Rac1 regulates the DNA damage response and protects from UV-light-induced keratinocyte apoptosis and skin carcinogenesis.

PubMed

Deshmukh, Jayesh; Pofahl, Ruth; Haase, Ingo

2017-03-09

Non-melanoma skin cancer (NMSC) is the most common type of cancer. Increased expression and activity of Rac1, a small Rho GTPase, has been shown previously in NMSC and other human cancers; suggesting that Rac1 may function as an oncogene in skin. DMBA/TPA skin carcinogenesis studies in mice have shown that Rac1 is required for chemically induced skin papilloma formation. However, UVB radiation by the sun, which causes DNA damage, is the most relevant cause for NMSC. A potential role of Rac1 in UV-light-induced skin carcinogenesis has not been investigated so far. To investigate this, we irradiated mice with epidermal Rac1 deficiency (Rac1-EKO) and their controls using a well-established protocol for long-term UV-irradiation. Most of the Rac1-EKO mice developed severe skin erosions upon long-term UV-irradiation, unlike their controls. These skin erosions in Rac1-EKO mice healed subsequently. Surprisingly, we observed development of squamous cell carcinomas (SCCs) within the UV-irradiation fields. This shows that the presence of Rac1 in the epidermis protects from UV-light-induced skin carcinogenesis. Short-term UV-irradiation experiments revealed increased UV-light-induced apoptosis of Rac1-deficient epidermal keratinocytes in vitro as well as in vivo. Further investigations using cyclobutane pyrimidine dimer photolyase transgenic mice revealed that the observed increase in UV-light-induced keratinocyte apoptosis in Rac1-EKO mice is DNA damage dependent and correlates with caspase-8 activation. Furthermore, Rac1-deficient keratinocytes showed reduced levels of p53, γ-H2AX and p-Chk1 suggesting an attenuated DNA damage response upon UV-irradiation. Taken together, our data provide direct evidence for a protective role of Rac1 in UV-light-induced skin carcinogenesis and keratinocyte apoptosis probably through regulating mechanisms of the DNA damage response and repair pathways.

The Balloon Experimental Twin Telescope for Infrared Interferometry (BETTII): High Angular Resolution Astronomy at Far-Infrared Wavelengths

NASA Technical Reports Server (NTRS)

Rinehart, Stephen A.

2008-01-01

Astronomical studies at infrared wavelengths have dramatically improved our understanding of the universe, and observations with Spitzer, the upcoming Herschel mission. and SOFIA will continue to provide exciting new discoveries. The comparatively low spatial resolution of these missions, however. is insufficient to resolve the physical scales on which mid- to far-infrared emission arises, resulting in source and structure ambiguities that limit our ability to answer key science questions. Interferometry enables high angular resolution at these wavelengths. We have proposed a new high altitude balloon experiment, the Balloon Experimental Twin Telescope for Infrared Interferometry (BETTII). High altitude operation makes far-infrared (30- 300micron) observations possible, and BETTII's 8-meter baseline provides unprecedented angular resolution (-0.5 arcsec) in this band. BETTII will use a double- Fourier instrument to simultaneously obtain both spatial and spectral informatioT. he spatially resolved spectroscopy provided by BETTII will address key questions about the nature of disks in young cluster stars and active galactic nuclei and the envelopes of evolved stars. BETTII will also lay the groundwork for future space interferometers.

Deletion of epidermal Rac1 inhibits HPV-8 induced skin papilloma formation and facilitates HPV-8- and UV-light induced skin carcinogenesis

PubMed Central

Deshmukh, Jayesh; Pofahl, Ruth; Pfister, Herbert; Haase, Ingo

2016-01-01

Overexpression and increased activity of the small Rho GTPase Rac1 has been linked to squamous cell carcinoma of the epidermis and mucosa in humans. Targeted deletion of Rac1 or inhibition of Rac1 activity in epidermal keratinocytes reduced papilloma formation in a chemical skin carcinogenesis mouse model. However, a potential role of Rac1 in HPV- and UV-light induced skin carcinogenesis has not been investigated so far, solar UV radiation being an important carcinogen to the skin. To investigate this, we deleted Rac1 or modulated its activity in mice with transgenic expression of Human papilloma virus type-8 (HPV-8) in epidermal keratinocytes. Our data show that inhibition or deletion of Rac1 results in reduced papilloma formation upon UV-irradiation with a single dose, whereas constitutive activation of Rac1 strongly increases papilloma frequency in these mice. Surprisingly, we observed that, upon chronic UV-irradiation, the majority of mice with transgenic expression of HPV-8 and epidermis specific Rac1 deletion developed squamous cell carcinomas. Taken together, our data show that Rac1 exerts a dual role in skin carcinogenesis: its activation is, on one hand, required for HPV-8- and UV-light induced papilloma formation but, on the other, suppresses the development of squamous cell carcinomas. PMID:27506937

Deletion of epidermal Rac1 inhibits HPV-8 induced skin papilloma formation and facilitates HPV-8- and UV-light induced skin carcinogenesis.

PubMed

Deshmukh, Jayesh; Pofahl, Ruth; Pfister, Herbert; Haase, Ingo

2016-09-06

Overexpression and increased activity of the small Rho GTPase Rac1 has been linked to squamous cell carcinoma of the epidermis and mucosa in humans. Targeted deletion of Rac1 or inhibition of Rac1 activity in epidermal keratinocytes reduced papilloma formation in a chemical skin carcinogenesis mouse model. However, a potential role of Rac1 in HPV- and UV-light induced skin carcinogenesis has not been investigated so far, solar UV radiation being an important carcinogen to the skin.To investigate this, we deleted Rac1 or modulated its activity in mice with transgenic expression of Human papilloma virus type-8 (HPV-8) in epidermal keratinocytes. Our data show that inhibition or deletion of Rac1 results in reduced papilloma formation upon UV-irradiation with a single dose, whereas constitutive activation of Rac1 strongly increases papilloma frequency in these mice. Surprisingly, we observed that, upon chronic UV-irradiation, the majority of mice with transgenic expression of HPV-8 and epidermis specific Rac1 deletion developed squamous cell carcinomas. Taken together, our data show that Rac1 exerts a dual role in skin carcinogenesis: its activation is, on one hand, required for HPV-8- and UV-light induced papilloma formation but, on the other, suppresses the development of squamous cell carcinomas.

Photoreactivation in Paramecium tetraurelia under conditions of various degrees of ozone layer depletion.

PubMed

Takahashi, Akihisa; Kumatani, Toshihiro; Usui, Saori; Tsujimura, Ryoko; Seki, Takaharu; Morimoto, Kouichi; Ohnishi, Takeo

2005-01-01

Photoreactivation (PR) is an efficient survival mechanism that helps protect cells against the harmful effects of solar-ultraviolet (UV) radiation. The PR mechanism involves photolyase, just one enzyme, and can repair DNA damage, such as cyclobutane-pyrimidine dimers (CPD) induced by near-UV/blue light, a component of sunlight. Although the balance of near-UV/blue light and far-UV light reaching the Earth's surface could be altered by the atmospheric ozone layer's depletion, experiments simulating this environmental change and its possible effects on life have not yet been performed. To quantify the strength of UVB in sunlight reaching the Earth's surface, we measured the number of CPD generated in plasmid DNA after UVB irradiation or exposure to sunlight. To simulate the increase of solar-UV radiation resulting from the ozone layer depletion, Paramecium tetraurelia was exposed to UVB and/or sunlight in clear summer weather. PR recovery after exposure to sunlight was complete at a low dose rate of 0.2 J/m2 x s, but was less efficient when the dose rate was increased by a factor of 2.5 to 0.5 J/m2 x s. It is suggested that solar-UV radiation would not influence the cell growth of P. tetraurelia for the reason of high PR activity even when the ozone concentration was decreased 30% from the present levels.

Photosensor with enhanced quantum efficiency

NASA Technical Reports Server (NTRS)

Janesick, James R. (Inventor); Elliott, Stythe T. (Inventor)

1989-01-01

A method to significantly increase the quantum efficiency (QE) of a CCD (or similar photosensor) applied in the UV, far UV and low energy x-ray regions of the spectrum. The increase in QE is accomplished by overthinning the backside of a CCD substrate beyond the epitaxial interface and UV flooding the sensor prior to use. The UV light photoemits electrons to the thinned surface and charges the backside negatively. This in turn forms an accumulation layer of holes near the Si-SiO.sub.2 interface creating an electric field gradient in the silicon which directs the photogenerated signal to the frontside where they are collected in pixel locations and later transferred. An oxide film, in which the backside charge resides, must have quality equivalent to a well aged native oxide which typically takes several years to form under ambient conditions. To reduce the amount of time in growing an oxide of sufficient quality, a process has been developed to grow an oxide by using deionized steam at 95.degree. C. which takes less than one hour to grow.

The heating of dust in starburst galaxies: The contribution of the nonionizing radiation

NASA Technical Reports Server (NTRS)

Calzetti, D.; Bohlin, R. C.; Kinney, Anne L.; Storchi-Bergmann, T.; Heckman, Timothy M.

1995-01-01

The IUE UV and optical spectra and the far-infrared (FIR) IRAS flux densities of a sample of starburst and blue compact galaxies are used to investigate the relationship between dust obscuration and dust emission. The amount of dust obscuration at UV wavelengths correlates with the FIR-to-blue ratio; and an analysis of the correlation indicates that not only the ionizing but also the nonionizing radiation contribute to the FIR emission. The amount of UV and optical energy lost to dust obscuration accounts for most of the cool dust FIUR emission and for about 70% of the warm dust FIR emission. The remaining 30% of the warm dust FIR flux is probably due to dust emission from regions of star formation which are embedded in opaque giant molecular clouds and do not contribute to the integrated UV and optical spectrum. The use of the FIR emission as an indicator of high-mass star formation rate in star-forming galaxies can be problematic, since the contribution to the FIR flux from cool dust emission heated by relatively old stars is nonnegligible.

TRACING REJUVENATION EVENTS IN NEARBY S0 GALAXIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marino, Antonietta; Bianchi, Luciana; Thilker, David A.

2011-08-01

With the aim of characterizing rejuvenation processes in early-type galaxies, we analyzed five barred S0 galaxies showing a prominent outer ring in ultraviolet (UV) imaging. We analyzed Galaxy Evolution Explorer far-UV (FUV) and near-UV (NUV), and optical data using stellar population models and estimated the age and the stellar mass of the entire galaxies and the UV-bright ring structures. Outer rings consist of young ({approx}<200 Myr old) stellar populations, accounting for up to 70% of the FUV flux but containing only a few percent of the total stellar mass. Integrated photometry of the whole galaxies places four of these objectsmore » on the green valley, indicating a globally evolving nature. We suggest such galaxy evolution is likely driven by bar-induced instabilities, i.e., inner secular evolution, that conveys gas to the nucleus and the outer rings. At the same time, H I observations of NGC 1533 and NGC 2962 suggest external gas re-fueling can play a role in the rejuvenation processes of such galaxies.« less

Light Scattering by Lunar Exospheric Dust: What could be Learned from LRO LAMP and LADEE UVS?

NASA Astrophysics Data System (ADS)

Glenar, D. A.; Stubbs, T. J.; Richard, D. T.; Stern, S. A.; Retherford, K. D.; Gladstone, R.; Feldman, P. D.; Colaprete, A.; Delory, G. T.

2011-12-01

Two complementary spectrometers, namely the Lunar Reconnaissance Orbiter, Lyman Alpha Mapping Project (LAMP) and the planned Lunar Atmosphere and Dust Environment Explorer (LADEE) Ultraviolet Explorer (UVS) will carry out sensitive searches for high altitude exospheric dust, via detection of scattered sunlight. The combined spectral coverage of these instruments extends from far-UV to near-IR wavelengths. Over this wavelength range, grain size parameter (X=2πr/λ, with r the grain radius and λ the wavelength) changes dramatically, which makes broad wavelength coverage a good diagnostic of grain size. Utilizing different pointing geometries, both LAMP and UVS are able to observe dust over a range of scattering angles, as well as measure the dust vertical profile via limb measurements at multiple tangent heights. We summarize several categories of information that can be inferred from the data sets, using broadband simulations of horizon glow as observed at the limb. Grain scattering properties used in these simulations were computed for multiple grain shapes using Discrete-Dipole theory. Some cautionary remarks are included regarding the use of Mie theory to interpret scattering measurements.

Companions to peculiar red giants: HR 363 and HR 1105

NASA Technical Reports Server (NTRS)

Ake, Thomas B., III; Johnson, Hollis R.; Perry, Benjamin F., Jr.

1988-01-01

Recent IUE observations of two Tc-deficient S-type peculiar red giants that are also spectroscopic binaries, HR 363 and HR 1105 are reported. A 675 min SWP exposure of HR 363 shows emission lines of O I 1304 and Si II 1812 and a trace of continuum. Compared to the M giants, the far UV flux may be relatively larger, indicating a possible contribution from a white dwarf companion, but no high temperature emission lines are seen to indicate that this is an interacting system where mass-transfer recently occurred. However, HR 1105 appears to have a highly variable UV companion. In 1982, no UV flux was discerned for this system, but by 1986 C IV was strong, increasing by a factor of 3 in 1987 with prominent lines of Si III, C III, O III, Si IV, and N V. Using orbital parameters, these observations are consistent with high activity occuring when the side of the S-star primary illuminated by the companion faces the Earth, but since the IUE data were taken over 3 orbits, a secular change in the UV component cannot be excluded.

Images in the rocket ultraviolet - Young clusters in H II regions of M83

NASA Technical Reports Server (NTRS)

Bohlin, Ralph C.; Cornett, Robert H.; Hill, Jesse K.; Stecher, Theodore P.

1990-01-01

UV images of M83 at 1540 and 2360 A reveal 18 compact sources that are associated with H II regions. E(B - V) values were estimated individually from the observed UV and optical colors and the Galactic UV extinction curve, using theoretical flux distributions. The dereddened colors are consistent with ages up to 3 x 10 to the 6th yr. A maximum possible age of 6.5 x 10 to the 6th yr is obtained assuming foreground reddening only. The distribution of observed colors is consistent with the Galactic reddening curve but not with enhanced far-UV extinction, as in the LMC 30 Dor curve. The H-alpha fluxes suggest either that dust within the H II regions absorbs up to 70 percent of the Lyman continuum radiation or that a similar fraction of the H-alpha flux is below the surface brightness detection limit. Cluster mass estimates depend on the range of stellar masses present but are probably in the range 10,000-100,000 solar masses.

Microfluidic-Mass Spectrometry Interfaces for Translational Proteomics.

PubMed

Pedde, R Daniel; Li, Huiyan; Borchers, Christoph H; Akbari, Mohsen

2017-10-01

Interfacing mass spectrometry (MS) with microfluidic chips (μchip-MS) holds considerable potential to transform a clinician's toolbox, providing translatable methods for the early detection, diagnosis, monitoring, and treatment of noncommunicable diseases by streamlining and integrating laborious sample preparation workflows on high-throughput, user-friendly platforms. Overcoming the limitations of competitive immunoassays - currently the gold standard in clinical proteomics - μchip-MS can provide unprecedented access to complex proteomic assays having high sensitivity and specificity, but without the labor, costs, and complexities associated with conventional MS sample processing. This review surveys recent μchip-MS systems for clinical applications and examines their emerging role in streamlining the development and translation of MS-based proteomic assays by alleviating many of the challenges that currently inhibit widespread clinical adoption. Crown Copyright © 2017. Published by Elsevier Ltd. All rights reserved.

Camera array based light field microscopy

PubMed Central

Lin, Xing; Wu, Jiamin; Zheng, Guoan; Dai, Qionghai

2015-01-01

This paper proposes a novel approach for high-resolution light field microscopy imaging by using a camera array. In this approach, we apply a two-stage relay system for expanding the aperture plane of the microscope into the size of an imaging lens array, and utilize a sensor array for acquiring different sub-apertures images formed by corresponding imaging lenses. By combining the rectified and synchronized images from 5 × 5 viewpoints with our prototype system, we successfully recovered color light field videos for various fast-moving microscopic specimens with a spatial resolution of 0.79 megapixels at 30 frames per second, corresponding to an unprecedented data throughput of 562.5 MB/s for light field microscopy. We also demonstrated the use of the reported platform for different applications, including post-capture refocusing, phase reconstruction, 3D imaging, and optical metrology. PMID:26417490

Use of big data in drug development for precision medicine

PubMed Central

Kim, Rosa S.; Goossens, Nicolas; Hoshida, Yujin

2016-01-01

Summary Drug development has been a costly and lengthy process with an extremely low success rate and lack of consideration of individual diversity in drug response and toxicity. Over the past decade, an alternative “big data” approach has been expanding at an unprecedented pace based on the development of electronic databases of chemical substances, disease gene/protein targets, functional readouts, and clinical information covering inter-individual genetic variations and toxicities. This paradigm shift has enabled systematic, high-throughput, and accelerated identification of novel drugs or repurposed indications of existing drugs for pathogenic molecular aberrations specifically present in each individual patient. The exploding interest from the information technology and direct-to-consumer genetic testing industries has been further facilitating the use of big data to achieve personalized Precision Medicine. Here we overview currently available resources and discuss future prospects. PMID:27430024

A new era in palaeomicrobiology: prospects for ancient dental calculus as a long-term record of the human oral microbiome.

PubMed

Warinner, Christina; Speller, Camilla; Collins, Matthew J

2015-01-19

The field of palaeomicrobiology is dramatically expanding thanks to recent advances in high-throughput biomolecular sequencing, which allows unprecedented access to the evolutionary history and ecology of human-associated and environmental microbes. Recently, human dental calculus has been shown to be an abundant, nearly ubiquitous, and long-term reservoir of the ancient oral microbiome, preserving not only microbial and host biomolecules but also dietary and environmental debris. Modern investigations of native human microbiota have demonstrated that the human microbiome plays a central role in health and chronic disease, raising questions about changes in microbial ecology, diversity and function through time. This paper explores the current state of ancient oral microbiome research and discusses successful applications, methodological challenges and future possibilities in elucidating the intimate evolutionary relationship between humans and their microbes.

Advances in the molecular diagnosis of diffuse large B-cell lymphoma in the era of precision medicine.

PubMed

Araf, Shamzah; Korfi, Koorosh; Rahim, Tahrima; Davies, Andrew; Fitzgibbon, Jude

2016-10-01

The adoption of high-throughput technologies has led to a transformation in our ability to classify diffuse large B-cell lymphoma (DLBCL) into unique molecular subtypes. In parallel, the expansion of agents targeting key genetic and gene expression signatures has led to an unprecedented opportunity to personalize cancer therapies, paving the way for precision medicine. Areas covered: This review summarizes the key molecular subtypes of DLBCL and outlines the novel technology platforms in development to discriminate clinically relevant subtypes. Expert commentary: The application of emerging diagnostic tests into routine clinical practise is gaining momentum following the demonstration of subtype specific activity by novel agents. Co-ordinated efforts are required to ensure that these state of the art technologies provide reliable and clinically meaningful results accessible to the wider haematology community.

Deep sequencing of evolving pathogen populations: applications, errors, and bioinformatic solutions

PubMed Central

2014-01-01

Deep sequencing harnesses the high throughput nature of next generation sequencing technologies to generate population samples, treating information contained in individual reads as meaningful. Here, we review applications of deep sequencing to pathogen evolution. Pioneering deep sequencing studies from the virology literature are discussed, such as whole genome Roche-454 sequencing analyses of the dynamics of the rapidly mutating pathogens hepatitis C virus and HIV. Extension of the deep sequencing approach to bacterial populations is then discussed, including the impacts of emerging sequencing technologies. While it is clear that deep sequencing has unprecedented potential for assessing the genetic structure and evolutionary history of pathogen populations, bioinformatic challenges remain. We summarise current approaches to overcoming these challenges, in particular methods for detecting low frequency variants in the context of sequencing error and reconstructing individual haplotypes from short reads. PMID:24428920

A Study of PG Quasar-Driven Outflows with COS

NASA Astrophysics Data System (ADS)

Hamann, Frederick

2013-10-01

Quasar outflows are an important part of the quasar phenomenon, but many questions remain about their energetics, physical properties and the role they might play in providing feedback to host galaxy evolution. We searched our own COS far-UV observations from the QUEST survey and other large COS programs to find a sample of 6 bright PG quasars with broad {FWHM > 400 km/s} high velocity {v > 1000 km/s} absorption lines that clearly form in quasar-driven winds. These quasars can fill an important gap in our understanding between local Seyferts with low-speed winds and high-redshift quasars with extreme BAL outflows. They are also well-studied at other wavelengths, with some evidence for the quasars driving galaxy-scale blowouts and shutting down star formation. But almost nothing is known about the quasar outflows themselves. We propose a detailed study of these 6 outflow quasars using new COS FUV observations to 1} expand the existing wavelength coverage across critical lines that are diagnostic of the outflow physical conditions, kinetic energies, and metallicities, and 2} check for line variability as an indicator of the outflow structure and locations. This quasar sample includes unusual cases with many low-abundance {PV 1118,1128 and SIV 1063} and excited-state lines {SIV 1073*, CIII* 1175, CII* 1335} that will provide unprecedented constraints on the outflow properties, plus the first known OVI-only mini-BAL outflow {no lower ions detected} for which we will cover NeVIII 770,780 to probe the highest ionization gas. The high FUV sensitivity of COS is uniquely able to measure this wide range of outflow lines in low-redshift quasars with no Lya forest contamination.

Light-dependent reversion gravitropism of the moss Pohlia nutans

NASA Astrophysics Data System (ADS)

Khorkavtsiv, O.

Plants have evolved highly sensitive mechanisms adapting their growth to the environmental conditions. Light and gravity are critical importance factors, which exerts an essential and specific influence on the determination of the growth direction and regulation of the early stages of plants ontogeny, sometimes effects of these factors being independent. The negative gravitropic resp onse of moss protonemata causes their spatial orientation towards light, which in its turn is the source of photosynthetic efficiency and phototropism. The gravitropism system does not function independently of other sensory response systems in plants. The competence of protonemata to gravity might be altered and the gravitropic response be reversed from negative to positive by light. It has been shown that response of apical cells to light depend on wavelenght: red light (max = 660 nm) represses the gravitropism and blue ( = 450 nm) inverts the protonemal gravitropism. Light, has also been shown for seed plants to modulate gravitropism of roots and stems through the action of phy B in red/far-red reversible way and by phy A in a non-reversible, very - low-fluence response (Hangarter, 1997). In P. nutans blue light reversed the gravitropism protonemal filaments. The mean angle after 24 h blue irradiation was 83 0, like that of negative gravitropic protonemata in darkness. We compared the effect of blue light on gravitropism of chloronemal filaments of Funaria hygrometrica having very low sensitivity to gravity. After action of blue light, however, the positive gravitropism of F. hygrometrica chloronemata was fairly high - 370 . Among blue light spectrum the highest reversion effectiveness in P. nutans had the UV light ( = 350 nm) initiated bends in 90% of protonemata. If a far-red pulse (5 min per h) was added to the blue/UV the gravitropic growth of protonemata resembled that in the dark control. Phytochrome has maxima of absorption in blue and red spectrum region and in our experiments far-red pulse removed the action of the blue/UV light. This indicates to a participation of phytochrome in changing direction of gravitropism. Since red light inhibited the gravitropism it may be suggested that phytochrome is not directly responsible for positive direction of gravitropism. Probably phytochrome only modifies the activity of other receptors or signal systems participating in realization of the gravitropic reaction. Moveover, the competence of apical cells protonemata to grow in opposite directions might be genetically controlled via blue-light - dependent repressor proteins (Lamparter et al., 1998).

Spatially Controlled Fabrication of Brightly Fluorescent Nanodiamond-Array with Enhanced Far-Red Si-V Luminescence

PubMed Central

Singh, Sonal; Thomas, Vinoy; Martyshkin, Dmitry; Kozlovskaya, Veronika; Kharlampieva, Eugenia

2014-01-01

We demonstrate a novel approach to precise pattern fluorescent nanodiamond-arrays with enhanced far-red intense photostable luminescence from silicon-vacancy (Si-V) defect centers. The precision-patterned pre-growth seeding of nanodiamonds is achieved by scanning probe “Dip-Pen” nanolithography technique using electrostatically-driven transfer of nanodiamonds from “inked” cantilevers to a UV-treated hydrophilic SiO2 substrate. The enhanced emission from nanodiamond-dots in the far-red is achieved by incorporating Si-V defect centers in subsequent chemical vapor deposition treatment. The development of a suitable nanodiamond ink, mechanism of ink transport, and effect of humidity, dwell time on nanodiamond patterning are investigated. The precision-patterning of as-printed (pre-CVD) arrays with dot diameter and dot height as small as 735 nm ± 27 nm, 61 nm ± 3 nm, respectively and CVD-treated fluorescent ND-arrays with consistently patterned dots having diameter and height as small as 820 nm ± 20 nm, 245 nm ± 23 nm, respectively using 1 s dwell time and 30% RH is successfully achieved. We anticipate that the far-red intense photostable luminescence (~738 nm) observed from Si-V defect centers integrated in spatially arranged nanodiamonds could be beneficial for the development of the next generation fluorescent based devices and applications. PMID:24394286

Effect of adaptive cruise control systems on mixed traffic flow near an on-ramp

NASA Astrophysics Data System (ADS)

Davis, L. C.

2007-06-01

Mixed traffic flow consisting of vehicles equipped with adaptive cruise control (ACC) and manually driven vehicles is analyzed using car-following simulations. Simulations of merging from an on-ramp onto a freeway reported in the literature have not thus far demonstrated a substantial positive impact of ACC. In this paper cooperative merging for ACC vehicles is proposed to improve throughput and increase distance traveled in a fixed time. In such a system an ACC vehicle senses not only the preceding vehicle in the same lane but also the vehicle immediately in front in the other lane. Prior to reaching the merge region, the ACC vehicle adjusts its velocity to ensure that a safe gap for merging is obtained. If on-ramp demand is moderate, cooperative merging produces significant improvement in throughput (20%) and increases up to 3.6 km in distance traveled in 600 s for 50% ACC mixed flow relative to the flow of all-manual vehicles. For large demand, it is shown that autonomous merging with cooperation in the flow of all ACC vehicles leads to throughput limited only by the downstream capacity, which is determined by speed limit and headway time.

High-Throughput Light Sheet Microscopy for the Automated Live Imaging of Larval Zebrafish

NASA Astrophysics Data System (ADS)

Baker, Ryan; Logan, Savannah; Dudley, Christopher; Parthasarathy, Raghuveer

The zebrafish is a model organism with a variety of useful properties; it is small and optically transparent, it reproduces quickly, it is a vertebrate, and there are a large variety of transgenic animals available. Because of these properties, the zebrafish is well suited to study using a variety of optical technologies including light sheet fluorescence microscopy (LSFM), which provides high-resolution three-dimensional imaging over large fields of view. Research progress, however, is often not limited by optical techniques but instead by the number of samples one can examine over the course of an experiment, which in the case of light sheet imaging has so far been severely limited. Here we present an integrated fluidic circuit and microscope which provides rapid, automated imaging of zebrafish using several imaging modes, including LSFM, Hyperspectral Imaging, and Differential Interference Contrast Microscopy. Using this system, we show that we can increase our imaging throughput by a factor of 10 compared to previous techniques. We also show preliminary results visualizing zebrafish immune response, which is sensitive to gut microbiota composition, and which shows a strong variability between individuals that highlights the utility of high throughput imaging. National Science Foundation, Award No. DBI-1427957.

C+/H2 gas in star-forming clouds and galaxies

NASA Astrophysics Data System (ADS)

Nordon, Raanan; Sternberg, Amiel

2016-11-01

We present analytic theory for the total column density of singly ionized carbon (C+) in the optically thick photon dominated regions (PDRs) of far-UV irradiated (star-forming) molecular clouds. We derive a simple formula for the C+ column as a function of the cloud (hydrogen) density, the far-UV field intensity, and metallicity, encompassing the wide range of galaxy conditions. When assuming the typical relation between UV and density in the cold neutral medium, the C+ column becomes a function of the metallicity alone. We verify our analysis with detailed numerical PDR models. For optically thick gas, most of the C+ column is mixed with hydrogen that is primarily molecular (H2), and this `C+/H2' gas layer accounts for almost all of the `CO-dark' molecular gas in PDRs. The C+/H2 column density is limited by dust shielding and is inversely proportional to the metallicity down to ˜0.1 solar. At lower metallicities, H2 line blocking dominates and the C+/H2 column saturates. Applying our theory to CO surveys in low-redshift spirals, we estimate the fraction of C+/H2 gas out of the total molecular gas to be typically ˜0.4. At redshifts 1 < z < 3 in massive disc galaxies the C+/H2 gas represents a very small fraction of the total molecular gas (≲ 0.16). This small fraction at high redshifts is due to the high gas surface densities when compared to local galaxies.

Characterization of diffraction gratings scattering in uv and ir for space applications

NASA Astrophysics Data System (ADS)

Achour, Sakina; Kuperman-Le Bihan, Quentin; Etcheto, Pierre

2017-09-01

The use of Bidirectional Scatter Distribution Function (BSDF) in space industry and especially when designing telescopes is a key feature. Indeed when speaking about space industry, one can immediately think about stray light issues. Those important phenomena are directly linked to light scattering. Standard BSDF measurement goniophotometers often have a resolution of about 0.1° and are mainly working in or close to the visible spectrum. This resolution is far too loose to characterize ultra-polished surfaces. Besides, wavelength range of BSDF measurements for space projects needs to be done far from visible range. How can we measure BSDF of ultra-polished surfaces and diffraction gratings in the UV and IR range with high resolution? We worked on developing a new goniophometer bench in order to be able to characterize scattering of ultra-polished surfaces and diffraction gratings used in everyday space applications. This ten meters long bench was developed using a collimated beam approach as opposed to goniophotometer using focused beam. Sources used for IR characterization were CO2 (10.6?m) and Helium Neon (3.39?m) lasers. Regarding UV sources, a collimated and spatially filtered UV LED was used. The detection was ensure by a photomultiplier coupled with synchronous detection as well as a MCT InSb detector. The so-built BSDF measurement instrument allowed us to measure BSDF of ultra-polished surfaces as well as diffraction gratings with an angular resolution of 0.02° and a dynamic of 1013 in the visible range. In IR as well as in UV we manage to get 109 with same angular resolution of 0.02°. The 1m arm and translation stages allows us to measure samples up to 200mm. Thanks to such a device allowing ultra-polished materials as well as diffraction gratings scattering characterization, it is possible to implement those BSDF measurements into simulation software and predict stray light issues. This is a big help for space industry engineers to apprehend stray light due to surface finishes and to delete those effects before the whole project is done. We are now thinking of possible improvement on our optical bench to try to get dynamic in IR and UV similar to what we have in visible range (e.g. 1013).

GHRS observations of cool, low-gravity stars. 1: The far-ultraviolet spectrum of alpha Orionis (M2 Iab)

NASA Technical Reports Server (NTRS)

Carpenter, Kenneth G.; Robinson, Richard D.; Wahlgren, Glenn M.; Linsky, Jeffrey L.; Brown, Alexander

1994-01-01

We present far-UV (1200-1930 A) observations of the prototypical red supergiant star alpha Ori, obtained with the Goddard High Resolution Spectrograph (GHRS) on the Hubble Space Telescope (HST). The observations, obtained in both low- (G140L) and medium- (G160/200M) resolution modes, unamibiguously confirm that the UV 'continuum' tentatively seen with (IUE) is in fact a true continuum and is not due to a blend of numerous faint emission features or scattering inside the IUE spectrograph. This continuum appears to originate in the chromospheric of the star at temperatures ranging from 3000-5000 K, and we argue that it is not related to previously reported putative companions or to bright spots on the stellar disk. Its stellar origin is further confirmed by overlying atomic and molecular absorptions from the chromosphere and circumstellar shell. The dominant structure in this spectral region is due to nine strong, broad absorption bands of the fourth-positive A-X system of CO, superposed on this continuum in the 1300-1600 A region. Modeling of this CO absorption indicates that it originates in the circumstellar shell in material characterized by T = 500 K, N(CO) = 1.0 x 10(exp 18) per sq cm, and V(sub turb) = 5.0 km per sec. The numerous chromospheric emission features are attributed mostly to fluorescent lines of Fe II and Cr II (both pumped by Lyman Alpha) and S I lines, plus a few lines of O I, C I, and Si II. The O I and C I UV 2 multiplets are very deficient in flux, compared to both the flux observed in lines originating from common upper levels but with markedly weaker intrinsic strength (i.e., O I UV 146 and C I UV 32) and to the UV 2 line fluxes seen in other cool, less luminous stars. This deficiency appears to be caused by strong self-absorption of these resonance lines in the circumstellar shell and/or upper chromosphere of alpha Ori. Atomic absorption features, primarily due to C I and Fe II are clearly seen in the G160M spectrum centered near 1655 A. These Fe II features are formed at temperatures that can occur only in the chromosphere of the star and are clearly not photospheric or circumstellar in origin.

Pave the way Towards Better Human Societies

NASA Astrophysics Data System (ADS)

Perc, Matjaž

In our societies, we invest a lot of resources to ensure technological progress, and to find out secrets about the deepest corners of our universe. As a result, we are experiencing technological breakthroughs at an unprecedented rate, and we invest billions into research that is as far away from everyday life as the east is from the west. While technology has the potential to improve the quality of life and the satisfaction of curiosity is rewarding, we must not fail to notice that, at the same time, many of our societies are falling apart. Inequality all over the world has become staggering, and we are seriously failing to meet the most basic needs of the majority of people that live on this planet. We have neglected adverse societal changes for far too long, and we have done very little in terms of research to understand, and more importantly, to reverse, or at least to impede, these very worrying trends...

Biosynthesis of therapeutic natural products using synthetic biology.

PubMed

Awan, Ali R; Shaw, William M; Ellis, Tom

2016-10-01

Natural products are a group of bioactive structurally diverse chemicals produced by microorganisms and plants. These molecules and their derivatives have contributed to over a third of the therapeutic drugs produced in the last century. However, over the last few decades traditional drug discovery pipelines from natural products have become far less productive and far more expensive. One recent development with promise to combat this trend is the application of synthetic biology to therapeutic natural product biosynthesis. Synthetic biology is a young discipline with roots in systems biology, genetic engineering, and metabolic engineering. In this review, we discuss the use of synthetic biology to engineer improved yields of existing therapeutic natural products. We further describe the use of synthetic biology to combine and express natural product biosynthetic genes in unprecedented ways, and how this holds promise for opening up completely new avenues for drug discovery and production. Copyright © 2016 Elsevier B.V. All rights reserved.

Full control of far-field radiation via photonic integrated circuits decorated with plasmonic nanoantennas.

PubMed

Sun, Yi-Zhi; Feng, Li-Shuang; Bachelot, Renaud; Blaize, Sylvain; Ding, Wei

2017-07-24

We theoretically develop a hybrid architecture consisting of photonic integrated circuit and plasmonic nanoantennas to fully control optical far-field radiation with unprecedented flexibility. By exploiting asymmetric and lateral excitation from silicon waveguides, single gold nanorod and cascaded nanorod pair can function as component radiation pixels, featured by full 2π phase coverage and nanoscale footprint. These radiation pixels allow us to design scalable on-chip devices in a wavefront engineering fashion. We numerically demonstrate beam collimation with 30° out of the incident plane and nearly diffraction limited divergence angle. We also present high-numerical-aperture (NA) beam focusing with NA ≈0.65 and vector beam generation (the radially-polarized mode) with the mode similarity greater than 44%. This concept and approach constitutes a designable optical platform, which might be a future bridge between integrated photonics and metasurface functionalities.

Vibration-rotation-tunneling spectroscopy of the van der Waals Bond: A new look at intermolecular forces

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cohen, R.C.; Saykally, R.J.

Measurements of the low-frequency van der Waals vibrations in weakly bound complexes by high-resolution laser spectroscopy provide a means to probe intermolecular forces at unprecedented levels of detail and precision. Several new methods are presently being used to record vibration/rotation-tunneling (VRT) transitions associated with the motions of the weak bonds in van der Waals clusters. The most direct measurements are those probing only the van der Waals modes themselves, which occur at far-infrared wavelengths. This article presents a review of the information on both intramolecular forces and intramolecular dynamics that has been obtained from far-infrared VRT spectra of 18 complexesmore » during the past several years. Some rotationally resolved measurements of van der Waals modes observed in combination with electronic or vibrational excitation are also discussed. 185 refs., 15 figs., 1 tab.« less

A high-throughput, simultaneous analysis of carotenoids, chlorophylls and tocopherol using sub two micron core shell technology columns.

PubMed

Chebrolu, Kranthi K; Yousef, Gad G; Park, Ryan; Tanimura, Yoshinori; Brown, Allan F

2015-09-15

A high-throughput, robust and reliable method for simultaneous analysis of five carotenoids, four chlorophylls and one tocopherol was developed for rapid screening large sample populations to facilitate molecular biology and plant breeding. Separation was achieved for 10 known analytes and four unknown carotenoids in a significantly reduced run time of 10min. Identity of the 10 analytes was confirmed by their UV-Vis absorption spectras. Quantification of tocopherol, carotenoids and chlorophylls was performed at 290nm, 460nm and 650nm respectively. In this report, two sub two micron particle core-shell columns, Kinetex from Phenomenex (1.7μm particle size, 12% carbon load) and Cortecs from Waters (1.6μm particle size, 6.6% carbon load) were investigated and their separation efficiencies were evaluated. The peak resolutions were >1.5 for all analytes except for chlorophyll-a' with Cortecs column. The ruggedness of this method was evaluated in two identical but separate instruments that produced CV<2 in peak retentions for nine out of 10 analytes separated. Copyright © 2015 Elsevier B.V. All rights reserved.

Performance Evaluation of IEEE 802.11ah Networks With High-Throughput Bidirectional Traffic.

PubMed

Šljivo, Amina; Kerkhove, Dwight; Tian, Le; Famaey, Jeroen; Munteanu, Adrian; Moerman, Ingrid; Hoebeke, Jeroen; De Poorter, Eli

2018-01-23

So far, existing sub-GHz wireless communication technologies focused on low-bandwidth, long-range communication with large numbers of constrained devices. Although these characteristics are fine for many Internet of Things (IoT) applications, more demanding application requirements could not be met and legacy Internet technologies such as Transmission Control Protocol/Internet Protocol (TCP/IP) could not be used. This has changed with the advent of the new IEEE 802.11ah Wi-Fi standard, which is much more suitable for reliable bidirectional communication and high-throughput applications over a wide area (up to 1 km). The standard offers great possibilities for network performance optimization through a number of physical- and link-layer configurable features. However, given that the optimal configuration parameters depend on traffic patterns, the standard does not dictate how to determine them. Such a large number of configuration options can lead to sub-optimal or even incorrect configurations. Therefore, we investigated how two key mechanisms, Restricted Access Window (RAW) grouping and Traffic Indication Map (TIM) segmentation, influence scalability, throughput, latency and energy efficiency in the presence of bidirectional TCP/IP traffic. We considered both high-throughput video streaming traffic and large-scale reliable sensing traffic and investigated TCP behavior in both scenarios when the link layer introduces long delays. This article presents the relations between attainable throughput per station and attainable number of stations, as well as the influence of RAW, TIM and TCP parameters on both. We found that up to 20 continuously streaming IP-cameras can be reliably connected via IEEE 802.11ah with a maximum average data rate of 160 kbps, whereas 10 IP-cameras can achieve average data rates of up to 255 kbps over 200 m. Up to 6960 stations transmitting every 60 s can be connected over 1 km with no lost packets. The presented results enable the fine tuning of RAW and TIM parameters for throughput-demanding reliable applications (i.e., video streaming, firmware updates) on one hand, and very dense low-throughput reliable networks with bidirectional traffic on the other hand.

Performance Evaluation of IEEE 802.11ah Networks With High-Throughput Bidirectional Traffic

PubMed Central

Kerkhove, Dwight; Tian, Le; Munteanu, Adrian; De Poorter, Eli

2018-01-01

So far, existing sub-GHz wireless communication technologies focused on low-bandwidth, long-range communication with large numbers of constrained devices. Although these characteristics are fine for many Internet of Things (IoT) applications, more demanding application requirements could not be met and legacy Internet technologies such as Transmission Control Protocol/Internet Protocol (TCP/IP) could not be used. This has changed with the advent of the new IEEE 802.11ah Wi-Fi standard, which is much more suitable for reliable bidirectional communication and high-throughput applications over a wide area (up to 1 km). The standard offers great possibilities for network performance optimization through a number of physical- and link-layer configurable features. However, given that the optimal configuration parameters depend on traffic patterns, the standard does not dictate how to determine them. Such a large number of configuration options can lead to sub-optimal or even incorrect configurations. Therefore, we investigated how two key mechanisms, Restricted Access Window (RAW) grouping and Traffic Indication Map (TIM) segmentation, influence scalability, throughput, latency and energy efficiency in the presence of bidirectional TCP/IP traffic. We considered both high-throughput video streaming traffic and large-scale reliable sensing traffic and investigated TCP behavior in both scenarios when the link layer introduces long delays. This article presents the relations between attainable throughput per station and attainable number of stations, as well as the influence of RAW, TIM and TCP parameters on both. We found that up to 20 continuously streaming IP-cameras can be reliably connected via IEEE 802.11ah with a maximum average data rate of 160 kbps, whereas 10 IP-cameras can achieve average data rates of up to 255 kbps over 200 m. Up to 6960 stations transmitting every 60 s can be connected over 1 km with no lost packets. The presented results enable the fine tuning of RAW and TIM parameters for throughput-demanding reliable applications (i.e., video streaming, firmware updates) on one hand, and very dense low-throughput reliable networks with bidirectional traffic on the other hand. PMID:29360798

Simulations of the Far-infrared Sky

NASA Astrophysics Data System (ADS)

Andreani, P.; Lutz, D.; Poglitsch, A.; Genzel, R.

2001-07-01

One of the main tasks of FIRST is to carry out shallow and deep surveys in the far-IR / submm spectral domain with unprecedented sensitivity. Selecting unbiased samples out of deep surveys will be crucial to determine the history of evolving dusty objects, and therefore of star-formation. However, the usual procedures to extract information from a survey, i.e. selection of sources, computing the number counts, the luminosity and the correlation functions, and so on, cannot lead to a fully satisfactory and rigorous determination of the source characteristics. This is expecially true in the far-IR where source identification and redshift determination are difficult. To check the reliability of results the simulation of a large number of mock surveys is mandatory. This provides information on the observational biases and instrumental effects introduced by the observing procedures and allows one to understand how the different parameters affect the source observation and detection. The project we are undertaking consists of (1) simulating the far-IR/submm surveys as PACS (and SPIRE) will observe, (2) extracting from these complete mock catalogues, (3) for the foreseen photometric bands selecting high-z candidates in colour-colour diagrams, and (4) testing different observing strategies to assess observational biases and understand how the different parameters affect source observation and detection.

Role of phytochromes A and B in the regulation of cell death and acclimatory responses to UV stress in Arabidopsis thaliana

PubMed Central

Rusaczonek, Anna; Czarnocka, Weronika; Kacprzak, Sylwia; Witoń, Damian; Ślesak, Ireneusz; Szechyńska-Hebda, Magdalena; Gawroński, Piotr; Karpiński, Stanisław

2015-01-01

Plants coordinate their responses to various biotic and abiotic stresses in order to optimize their developmental and acclimatory programmes. The ultimate response to an excessive amount of stress is local induction of cell death mechanisms. The death of certain cells can help to maintain tissue homeostasis and enable nutrient remobilization, thus increasing the survival chances of the whole organism in unfavourable environmental conditions. UV radiation is one of the environmental factors that negatively affects the photosynthetic process and triggers cell death. The aim of this work was to evaluate a possible role of the red/far-red light photoreceptors phytochrome A (phyA) and phytochrome B (phyB) and their interrelations during acclimatory responses to UV stress. We showed that UV-C treatment caused a disturbance in photosystem II and a deregulation of photosynthetic pigment content and antioxidant enzymes activities, followed by increased cell mortality rate in phyB and phyAB null mutants. We also propose a regulatory role of phyA and phyB in CO2 assimilation, non-photochemical quenching, reactive oxygen species accumulation and salicylic acid content. Taken together, our results suggest a novel role of phytochromes as putative regulators of cell death and acclimatory responses to UV. PMID:26385378

Stellar Activity in the Broadband Ultraviolet

NASA Astrophysics Data System (ADS)

Findeisen, K.; Hillenbrand, L.; Soderblom, D.

2011-07-01

The completion of the GALEX All-Sky Survey in the ultraviolet allows activity measurements to be acquired for many more stars than is possible with the limited sensitivity of ROSAT or the limited sky coverage of Chandra, XMM, or spectroscopic surveys for line emission in the optical or ultraviolet. We have explored the use of GALEX photometry as an activity indicator, using stars within 50 pc as a calibration sample representing the field and in selected nearby associations representing the youngest stages of stellar evolution. We present preliminary relations between UV flux and the optical activity indicator R'HK and between UV flux and age. We demonstrate that far-UV (FUV, 1350-1780 Å) excess flux is roughly proportional to R'HK. We also detect a correlation between near-UV (NUV, 1780-2830 Å) flux and activity or age, but the effect is much more subtle, particularly for stars older than ~0.5-1 Gyr. Both the FUV and NUV relations show large scatter, ~0.2 mag when predicting UV flux, ~0.18 dex when predicting R'HK, and ~0.4 dex when predicting age. This scatter appears to be evenly split between observational errors in current state-of-the-art data and long-term activity variability in the sample stars.

Visualization under ultraviolet light enhances 100-fold the sensitivity of peroxidase-stained blots.

PubMed

Domingo, A; Marco, R

1989-10-01

As described in this article, visualization and/or photography under uv light of 4-chloro-1-naphthol-developed, peroxidase-marked immunoblots allows an increase in sensitivity of more than 100 times over the apparent staining results observable under normal visible white light. This increase in sensitivity can be obtained with the minimal additional requirement of an uv lamp, with the actual chloronaphthol staining procedure remaining unaltered and thereby allowing the monitoring of specific reactions with much smaller quantities of antigen or antibodies. Substantial shortening of the procedure is another advantage, making it possible to complete in 20 min or even less a procedure usually requiring 3 to 6 h. The phenomenon depends on the uv absorption and the fluorescence quenching properties of the products of the peroxidase reaction. The absorption spectra of the membranes with or without peroxidase products indicate that an intermediate in the peroxidase reaction is responsible for the absorption under uv light. This intermediate accumulates under conditions where the final product absorbing in the visible light has not begun to be produced, thus explaining the large increase in sensitivity. The behaviors of three types of membranes, nitrocellulose, nylon, and Immobilon (PVDF), are compared. Due to its lower uv absorption, PVDF gives by far the best results, followed by nitrocellulose.

The Ultraviolet Spectrograph (UVS) on Juno

NASA Astrophysics Data System (ADS)

Gladstone, G. R.; Persyn, S.; Eterno, J.; Slater, D. C.; Davis, M. W.; Versteeg, M. H.; Persson, K. B.; Siegmund, O. H.; Marquet, B.; Gerard, J.; Grodent, D. C.

2008-12-01

Juno, a NASA New Frontiers mission, plans for launch in August 2011, a 5-year cruise (including a flyby of Earth in October 2013 for a gravity boost), and 14 months around Jupiter after arriving in August 2016. The spinning (2 RPM), solar-powered Juno will study Jupiter from a highly elliptical orbit, in which the spacecraft (for about 6 hours once every 11 days) dives down over the north pole, skims the outermost atmosphere, and rises back up over the south pole. This orbit allows Juno avoid most of the intense particle radiation surrounding the planet and provides an excellent platform for investigating Jupiter's polar magnetosphere. Part of the exploration of Jupiter's polar magnetosphere will involve remote sensing of the far-ultraviolet H and H2 auroral emissions, plus gases such as methane and acetylene which add their absorption signature to the H2 emissions. This hydrocarbon absorption can be used to estimate the energy of the precipitating electrons; since more energetic electrons penetrate deeper into the atmosphere and the UV emissions they produce will show more absorption. Juno will carry an Ultraviolet Spectrograph (UVS) to make spectral images of Jupiter's aurora. UVS is a UV imaging spectrograph sensitive to both extreme and far ultraviolet emissions in the 70-205~nm range that will characterize the morphology and spectral nature of Jupiter's auroral emissions. Juno UVS consists of two separate sections: a dedicated telescope/spectrograph assembly and a vault electronics box. The telescope/spectrograph assembly contains a telescope which feeds a 0.15-m Rowland circle spectrograph. The telescope has an input aperture 40×40~mm2 and uses an off-axis parabolic primary mirror. A flat scan mirror situated at the front end of the telescope (used to target specific auroral features at up to ±30° perpendicular to the Juno spin plane) directs incoming light to the primary. The light is then focused onto the spectrograph entrance slit, which has a 'dog- bone' shape 6° long, in three 2° sections of 0.2°, 0.05°, and 0.2° width (projected onto the sky). Light entering the slit is dispersed by a toroidal grating which focuses the UV bandpass onto a curved microchannel plate (MCP) cross delay line (XDL) detector with a solar blind UV- sensitive CsI photocathode, which makes up the instrument's focal plane. Tantalum shielding surrounds the detector assembly to protect the detector and the adjacent detector electronics from high-energy electrons. The main electronics box is located in the Juno vault. Inside are two redundant high-voltage power supplies (HVPS), two redundant low-voltage power supplies, the command and data handling (C&DH) electronics, heater/actuator activation electronics, scan mirror electronics, and event processing electronics. An overview of the UVS design and scientific performance will be presented.

GALEX studies on UV properties of Nearby Early-type Galaxies

NASA Astrophysics Data System (ADS)

Rhee, J.; Rich, R. M.; Sohn, Y.-J.; Lee, Y.-W.; Gil de Paz, A.; Deharveng, J.-M.; Donas, J.; Boselli, A.; Rey, S.-C.; Yi, S. K.; GALEX Team

2005-12-01

We present the results of surface photometry on the far-UV (FUV) and near-UV (NUV) images of 23 nearby elliptical galaxies and spiral bulges taken from the GALEX (Galaxy Evolution Explorer). Surface brightness profiles of most galaxies are consistent with de Vaucouleurs' r1/4 law except for some cases more consistent with exponential profiles. We analyze the radial profiles of UV color, (FUV - NUV), and Mg2 line index to investigate a correlation between the gradients of UV color and metal abundance for early-type galaxies. UV color gradients are calculated by applying least square fitting to UV color profile up to effective radius, while Mg2 line strength gradients are compiled for 12 galaxies from previous works. For the 12 early-type galaxies, we find that UV color profiles have a trend to become bluer inward and there is a weak correlation between the gradients of UV color and Mg2 line strength in the sense that galaxies with larger UV color gradients tend to have stronger metal abundance gradients. We also explore the properties of the GALEX-measured ultraviolet rising flux in 96 nearby elliptical galaxies, as a function Lick Mg2 index and velocity dispersion. We include 36 galaxies in the Virgo cluster from the sample of Boselli et al (2005). We find no correlation between the Mg2 index, and log σ and FUV-r. This confirms the findings of Rich et al (2005) for a sample of GALEX/SDSS quiescent early-type galaxies. This is true both for the integrated light, and for nuclear colors. We find a weak correlation between Mg2 and FUV-NUV. We gratefully acknowledge NASA's support for construction, operation, and science analysis for the GALEX mission, developed in cooperation with the Centre National d'Etudes Spatiales of France and the Korean Ministry of Science and Technology.

Deep UV Luminosity Functions at the Infall Region of the Coma Cluster

NASA Technical Reports Server (NTRS)

Hammer, D. M.; Hornschemeier, A. E.; Salim, S.; Smith, R.; Jenkins, L.; Mobasher, B.; Miller, N.; Ferguson, H.

2011-01-01

We have used deep GALEX observations at the infall region of the Coma cluster to measure the faintest UV luminosity functions (LFs) presented for a rich galaxy cluster thus far. The Coma UV LFs are measured to M(sub uv) = -10.5 in the GALEX FUV and NUV bands, or 3.5 mag fainter than previous studies, and reach the dwarf early-type galaxy population in Coma for the first time. The Schechter faint-end slopes (alpha approximately equal to -1.39 in both GALEX bands) are shallower than reported in previous Coma UV LF studies owing to a flatter LF at faint magnitudes. A Gaussian-plus-Schechter model provides a slightly better parametrization of the UV LFs resulting in a faint-end slope of alpha approximately equal to -1.15 in both GALEX bands. The two-component model gives faint-end slopes shallower than alpha = -1 (a turnover) for the LFs constructed separately for passive and star forming galaxies. The UV LFs for star forming galaxies show a turnover at M(sub UV) approximately equal to -14 owing to a deficit of dwarf star forming galaxies in Coma with stellar masses below M(sub *) = 10(sup 8) solar mass. A similar turnover is identified in recent UV LFs measured for the Virgo cluster suggesting this may be a common feature of local galaxy clusters, whereas the field UV LFs continue to rise at faint magnitudes. We did not identify an excess of passive galaxies as would be expected if the missing dwarf star forming galaxies were quenched inside the cluster. In fact, the LFs for both dwarf passive and star forming galaxies show the same turnover at faint magnitudes. We discuss the possible origin of the missing dwarf star forming galaxies in Coma and their expected properties based on comparisons to local field galaxies.

RGS17: an emerging therapeutic target for lung and prostate cancers

PubMed Central

Bodle, Christopher R; Mackie, Duncan I; Roman, David L

2013-01-01

Ligands for G-protein-coupled receptors (GPCRs) represent approximately 50% of currently marketed drugs. RGS proteins modulate heterotrimeric G proteins and, thus, GPCR signaling, by accelerating the intrinsic GTPase activity of the Gα subunit. Given the prevalence of GPCR targeted therapeutics and the role RGS proteins play in G protein signaling, some RGS proteins are emerging as targets in their own right. One such RGS protein is RGS17. Increased RGS17 expression in some prostate and lung cancers has been demonstrated to support cancer progression, while reduced expression of RGS17 can lead to development of chemotherapeutic resistance in ovarian cancer. High-throughput screening is a powerful tool for lead compound identification, and utilization of high-throughput technologies has led to the discovery of several RGS inhibitors, thus far. As screening technologies advance, the identification of novel lead compounds the subsequent development of targeted therapeutics appears promising. PMID:23734683

Applicability of discovery science approach to determine biological effects of mobile phone radiation.

PubMed

Leszczynski, Dariusz; Nylund, Reetta; Joenväärä, Sakari; Reivinen, Jukka

2004-02-01

We argue that the use of high-throughput screening techniques, although expensive and laborious, is justified and necessary in studies that examine biological effects of mobile phone radiation. The "case of hsp27 protein" presented here suggests that even proteins with only modestly altered (by exposure to mobile phone radiation) expression and activity might have an impact on cell physiology. However, this short communication does not attempt to present the full scientific evidence that is far too large to be presented in a single article and that is being prepared for publication in three separate research articles. Examples of the experimental evidence presented here were designed to show the flow of experimental process demonstrating that the use of high-throughput screening techniques might help in rapid identification of the responding proteins. This, in turn, can help in speeding up of the process of determining whether these changes might affect human health.*

Numerical techniques for high-throughput reflectance interference biosensing

NASA Astrophysics Data System (ADS)

Sevenler, Derin; Ünlü, M. Selim

2016-06-01

We have developed a robust and rapid computational method for processing the raw spectral data collected from thin film optical interference biosensors. We have applied this method to Interference Reflectance Imaging Sensor (IRIS) measurements and observed a 10,000 fold improvement in processing time, unlocking a variety of clinical and scientific applications. Interference biosensors have advantages over similar technologies in certain applications, for example highly multiplexed measurements of molecular kinetics. However, processing raw IRIS data into useful measurements has been prohibitively time consuming for high-throughput studies. Here we describe the implementation of a lookup table (LUT) technique that provides accurate results in far less time than naive methods. We also discuss an additional benefit that the LUT method can be used with a wider range of interference layer thickness and experimental configurations that are incompatible with methods that require fitting the spectral response.

Degradation of polycyclic aromatic hydrocarbons in a coking wastewater treatment plant residual by an O3/ultraviolet fluidized bed reactor.

PubMed

Lin, Chong; Zhang, Wanhui; Yuan, Mengyang; Feng, Chunhua; Ren, Yuan; Wei, Chaohai

2014-09-01

Coking wastewater treatment plant (CWWTP) represents a typical point source of polycyclic aromatic hydrocarbons (PAHs) to the water environment and threatens the safety of drinking water in downstream regions. To enhance the removal of residual PAHs from bio-treated coking wastewater, a pilot-scale O3/ultraviolet (UV) fluidized bed reactor (O3/UV FBR) was designed and different operating factors including UV irradiation intensity, pH, initial concentration, contact time, and hydraulic retention time (HRT) were investigated at an ozone level of 240 g h(-1) and 25 ± 3 °C. A health risk evaluation and cost analysis were also carried out under the continuous-flow mode. As far as we know, this is the first time an O3/UV FBR has been explored for PAHs treatment. The results indicated that between 41 and 75 % of 18 target PAHs were removed in O3/UV FBR due to synergistic effects of UV irradiation. Both increased reaction time and increased pH were beneficial for the removal of PAHs. The degradation of the target PAHs within 8 h can be well fitted by the pseudo-first-order kinetics (R (2) > 0.920). The reaction rate was also positively correlated with the initial concentrations of PAHs. The health risk assessment showed that the total amount of carcinogenic substance exposure to surface water was reduced by 0.432 g day(-1). The economic analysis showed that the O3/UV FBR was able to remove 18 target PAHs at a cost of US$0.34 m(-3). These results suggest that O3/UV FBR is efficient in removing residuals from CWWTP, thus reducing the accumulation of persistent pollutant released to surface water.

Calibration of the Voyager Ultraviolet Spectrometers and the Composition of the Heliosphere Neutrals: Reassessment

NASA Astrophysics Data System (ADS)

Ben-Jaffel, Lotfi; Holberg, J. B.

2016-06-01

The data harvest from the Voyagers’ (V 1 and V 2) Ultraviolet Spectrometers (UVS) covers encounters with the outer planets, measurements of the heliosphere sky-background, and stellar spectrophotometry. Because their period of operation overlaps with many ultraviolet missions, the calibration of V1 and V2 UVS with other spectrometers is invaluable. Here we revisit the UVS calibration to assess the intriguing sensitivity enhancements of 243% (V1) and 156% (V2) proposed recently. Using the Lyα airglow from Saturn, observed in situ by both Voyagers, and remotely by International Ultraviolet Explorer (IUE), we match the Voyager values to IUE, taking into account the shape of the Saturn Lyα line observed with the Goddard High Resolution Spectrograph on board the Hubble Space Telescope. For all known ranges of the interplanetary hydrogen density, we show that the V1 and V2 UVS sensitivities cannot be enhanced by the amounts thus far proposed. The same diagnostic holds for distinct channels covering the diffuse He I 58.4 nm emission. Our prescription is to keep the original calibration of the Voyager UVS with a maximum uncertainty of 30%, making both instruments some of the most stable EUV/FUV spectrographs in the history of space exploration. In that frame, we reassess the excess Lyα emission detected by Voyager UVS deep in the heliosphere, to show its consistency with a heliospheric but not galactic origin. Our finding confirms results obtained nearly two decades ago—namely, the UVS discovery of the distortion of the heliosphere and the corresponding obliquity of the local interstellar magnetic field (˜ 40^\\circ from upwind) in the solar system neighborhood—without requiring any revision of the Voyager UVS calibration.

Forensic Drug Identification, Confirmation, and Quantification Using Fully Integrated Gas Chromatography with Fourier Transform Infrared and Mass Spectrometric Detection (GC-FT-IR-MS).

PubMed

Lanzarotta, Adam; Lorenz, Lisa; Voelker, Sarah; Falconer, Travis M; Batson, JaCinta S

2018-05-01

This manuscript is a continuation of a recent study that described the use of fully integrated gas chromatography with direct deposition Fourier transform infrared detection and mass spectrometric detection (GC-FT-IR-MS) to identify and confirm the presence of sibutramine and AB-FUBINACA. The purpose of the current study was to employ the GC-FT-IR portion of the same instrument to quantify these compounds, thereby demonstrating the ability to identify, confirm, and quantify drug substances using a single GC-FT-IR-MS unit. The performance of the instrument was evaluated by comparing quantitative analytical figures of merit to those measured using an established, widely employed method for quantifying drug substances, high performance liquid chromatography with ultraviolet detection (HPLC-UV). The results demonstrated that GC-FT-IR was outperformed by HPLC-UV with regard to sensitivity, precision, and linear dynamic range (LDR). However, sibutramine and AB-FUBINACA concentrations measured using GC-FT-IR were not significantly different at the 95% confidence interval compared to those measured using HPLC-UV, which demonstrates promise for using GC-FT-IR as a semi-quantitative tool at the very least. The most significant advantage of GC-FT-IR compared to HPLC-UV is selectivity; a higher level of confidence regarding the identity of the analyte being quantified is achieved using GC-FT-IR. Additional advantages of using a single GC-FT-IR-MS instrument for identification, confirmation, and quantification are efficiency, increased sample throughput, decreased consumption of laboratory resources (solvents, chemicals, consumables, etc.), and thus cost.