Magnetic properties of sediments in cores from the Mandovi estuary, western India: Inferences on provenance and pollution.

PubMed

Prajith, A; Rao, V Purnachandra; Kessarkar, Pratima M

2015-10-15

Magnetic properties of sediments were investigated in 7 gravity cores recovered along a transect of the Mandovi estuary, western India to understand their provenance and pollution. The maximum magnetic susceptibility of sediments was at least 6 times higher in the upper/middle estuary than in lower estuary/bay. The χfd% and χARM/SIRM of sediments indicated coarse, multi-domain and pseudo-single domain magnetic grains, resembling ore material in the upper/middle estuary and coarse stable single domain (SSD) to fine SSD grains in the lower estuary/bay. Mineralogy parameters indicated hematite and goethite-dominated sediments in the upper/middle estuary and magnetite-dominated sediments in the lower estuary/bay. Two sediment types were discernible because of deposition of abundant ore material in the upper/middle estuary and detrital sediment in the lower estuary/bay. The enrichment factor and Index of geo-accumulation of metals indicated significant to strong pollution with respect to Fe and Mn in sediments from the upper/middle estuary. Copyright © 2015 Elsevier Ltd. All rights reserved.

Distribution and assessment of sediment toxicity in Tamaki Estuary, Auckland, New Zealand

NASA Astrophysics Data System (ADS)

Abrahim, G. M. S.; Parker, R. J.; Nichol, S. L.

2007-07-01

Heavy metal levels in surface sediments from Tamaki Estuary demonstrate significant up estuary increases in Cu, Pb, Zn, Cd and mud concentrations. Increased metal levels towards the head of the estuary are linked to local catchment sources reflecting the historical development, industrialisation and urbanisation of catchment areas surrounding the upper estuary. The relatively narrow constriction in the middle estuary (Panmure area), makes it susceptible to accumulation of upper estuary pollutants, since the constriction reduces circulation and extends the time required for fine waterborne sediments in the upper estuary to exchange with fresh coastal water. As a result fine fraction sediments trapped in the upper estuary facilitate capture and retention of pollutants at the head of the estuary. The increase in sandy mud poor sediments towards the mouth of the estuary is associated with generally low metal concentrations. The estuary’s geomorphic shape with a mid estuary constriction, sediment texture and mineralogy and catchment history are significant factors in understanding the overall spatial distribution of contaminants in the estuary. Bulk concentration values for Cu, Pb, Zn, and Cd in all the studied surface samples occur below ANZECC ISQG-H toxicity values. Cd and Cu concentrations are also below the ISQG-L toxicity levels for these elements. However, Pb and Zn concentrations do exceed the ISQG-L values in some of the surface bulk samples in the upper estuary proximal to long established sources of catchment pollution.

Suspended Sediment Dynamics in the Macrotidal Seine Estuary (France): 1. Numerical Modeling of Turbidity Maximum Dynamics

NASA Astrophysics Data System (ADS)

Grasso, F.; Verney, R.; Le Hir, P.; Thouvenin, B.; Schulz, E.; Kervella, Y.; Khojasteh Pour Fard, I.; Lemoine, J.-P.; Dumas, F.; Garnier, V.

2018-01-01

Tidal pumping, baroclinic circulation, and vertical mixing are known to be the main mechanisms responsible for the estuarine turbidity maximum (ETM) formation. However, the influence of hydro-meteorological conditions on ETM dynamics is still not properly grasped and requires further investigation to be quantified. Based on a realistic three-dimensional numerical model of the macrotidal Seine Estuary (France) that accounts for mud and sand transport processes, the objective of this study is to quantify the influence of the main forcing (river flow, tides, and waves) on the ETM location and mass changes. As expected, the ETM location is strongly modulated by semidiurnal tidal cycles and fortnightly time scales with a high sensitivity to river flow variations. The ETM mass is clearly driven by the tidal range, characteristic of the tidal pumping mechanism. However, it is not significantly affected by the river flow. Energetic wave conditions substantially influence the ETM mass by contributing up to 44% of the maximum mass observed during spring tides and by increasing the mass by a factor of 3 during mean tides compared to calm wave conditions. This means that neglecting wave forcing can result in significantly underestimating the ETM mass in estuarine environments. In addition, neap-to-spring phasing has a strong influence on ETM location and mass through a hysteresis response associated with the delay for tidal pumping and stratification to fully develop. Finally, simulations show that the uppermost limit of the Seine ETM location did not change notably during the last 35 years; however, the seaward limit migrated few kilometers upstream.

Aquatic ecology of the Elwha River estuary prior to dam removal: Chapter 7 in Coastal habitats of the Elwha River, Washington--biological and physical patterns and processes prior to dam removal

USGS Publications Warehouse

Duda, Jeffrey J.; Beirne, Matthew M.; Larsen, Kimberly; Barry, Dwight; Stenberg, Karl; McHenry, Michael L.; Duda, Jeffrey J.; Warrick, Jonathan A.; Magirl, Christopher S.

2011-01-01

The removal of two long-standing dams on the Elwha River in Washington State will initiate a suite of biological and physical changes to the estuary at the river mouth. Estuaries represent a transition between freshwater and saltwater, have unique assemblages of plants and animals, and are a critical habitat for some salmon species as they migrate to the ocean. This chapter summarizes a number of studies in the Elwha River estuary, and focuses on physical and biological aspects of the ecosystem that are expected to change following dam removal. Included are data sets that summarize (1) water chemistry samples collected over a 16 month period; (2) beach seining activities targeted toward describing the fish assemblage of the estuary and migratory patterns of juvenile salmon; (3) descriptions of the aquatic and terrestrial invertebrate communities in the estuary, which represent an important food source for juvenile fish and are important water quality indicators; and (4) the diet and growth patterns of juvenile Chinook salmon in the lower Elwha River and estuary. These data represent baseline conditions of the ecosystem after nearly a century of changes due to the dams and will be useful in monitoring the changes to the river and estuary following dam removal.

Nucleic acid extraction from polluted estuarine water for detection of viruses and bacteria by PCR and RT-PCR analysis.

PubMed

Petit, F; Craquelin, S; Guespin-Michel, J; Buffet-Janvresse, C

1999-03-01

We describe an extraction protocol for genomic DNA and RNA of both viruses and bacteria from polluted estuary water. This procedure was adapted to the molecular study of microflora of estuarine water where bacteria and viruses are found free, forming low-density biofilms, or intimately associated with organo-mineral particles. The sensitivity of the method was determined with seeded samples for RT-PCR and PCR analysis of viruses (10 virions/mL), and bacteria (1 colony-forming unit mL). We report an example of molecular detection of both poliovirus and Salmonella in the Seine estuary (France) and an approach to studying their association with organo-mineral particles.

Summer use of the tidal freshwaters of the River Seine by three estuarine fish: Coupling telemetry and GIS spatial analysis

NASA Astrophysics Data System (ADS)

Le Pichon, C.; Coustillas, J.; Zahm, A.; Bunel, M.; Gazeau-Nadin, C.; Rochard, E.

2017-09-01

Acoustic telemetry and GIS-based spatial analysis were used to investigate the summer habitat use and movement patterns of three fish species in the tidal freshwaters of the Seine estuary (France). Experimental displacement of tagged individuals of thin-lipped grey mullet (Liza ramada), European eel (Anguilla anguilla), and common bream (Abramis brama) were conducted to test for their spatial fidelity and home range establishment. Most tagged individuals (95%) successfully returned to their previously occupied capture site, showing spatial homing abilities. The studied upstream tidal freshwater segment of the Seine estuary was regularly used by grey mullet as a part of its larger summer home range, while European eel and common bream were resident in this segment. The fidelity of eel to small nocturnal refuges and the regular use of intertidal waterbodies at high tide by grey mullet and bream suggested that they possess a capacity of acquiring spatial memory of habitats in a fluctuating environment. Importantly, the scale of movements travelled by each species was positively related to tidal phase. Grey mullet and bream, both visual feeders, exhibited short-term tidal movements to known habitats, providing food resources and contiguous resting habitat suggesting that they have shown behavioural strategies adaptive to fluctuating environments. Eel, in contrast, was found to have a different strategy strongly related to diel dynamics: it stayed in subtidal habitats rich in refuges that remained available at low tide. The results of this study emphasize the importance of restoring intertidal waterbodies and the relevance of considering the availability of adjacent subtidal habitats providing refuge at low tides.

Comparative study of trophic organization of juvenile fish assemblages of three tidal creeks in a tropical semi-arid estuary.

PubMed

Figueiredo, G G A A; Pessanha, A L M

2016-07-01

A comparison of three tidal creeks assessed the effects of the hydrological regime on trophic organization in juvenile fish assemblages of 21 species in a tropical estuary in north-eastern Brazil. There were seven trophic guilds represented spatially. Zooplanktivore and zoobenthivore guilds dominated the lower estuary, whereas omnivores and detritivores dominated the upper estuary. In the rainy season, the zooplanktivore and omnivore guilds were more common throughout the estuary, but in the dry season, zoobenthivores and piscivores occurred throughout. The trophic organization results show that (1) there was a higher complexity in tidal creeks in the upper estuary compared with the first tidal creek in the lower region and (2) trophic linkages increased in the upper estuary, principally the number of omnivore and detritivore species. Spatial variation in trophic structure was primarily associated with differences in the location of the tidal creeks along the estuary, and this variability was partly attributed to fish species richness; the number of species increased towards the upper estuary, and additional species occupied different trophic levels or used additional resources. © 2015 The Fisheries Society of the British Isles.

Contribution of the upper river, the estuarine region, and the adjacent sea to the heavy metal pollution in the Yangtze Estuary.

PubMed

Yin, Su; Wu, Yuehan; Xu, Wei; Li, Yangyang; Shen, Zhenyao; Feng, Chenghong

2016-07-01

To determine whether the discharge control of heavy metals in the Yangtze River basin can significantly change the pollution level in the estuary, this study analyzed the sources (upper river, the estuarine region, and the adjacent sea) of ten heavy metals (As, Cd, Co, Cr, Cu, Hg, Ni, Pb, Sb, and Zn) in dissolved and particulate phases in the surface water of the estuary during wet, normal, and dry seasons. Metal sources inferred from section fluxes agree with those in statistical analysis methods. Heavy metal pollution in the surface water of Yangtze Estuary primarily depends on the sediment suspension and the wastewater discharge from estuary cities. Upper river only constitutes the main source of dissolved heavy metals during the wet season, while the estuarine region and the adjacent sea (especially the former) dominate the dissolved metal pollution in the normal and dry seasons. Particulate metals are mainly derived from sediment suspension in the estuary and the adjacent sea, and the contribution of the upper river can be neglected. Compared with the hydrologic seasons, flood-ebb tides exert a more obvious effect on the water flow directions in the estuary. Sediment suspension, not the upper river, significantly affects the suspended particulate matter concentration in the estuary. Copyright © 2016 Elsevier Ltd. All rights reserved.

Estuary-dependence of larval fishes in a non-estuary associated South African surf zone: evidence for continuity of surf assemblages

NASA Astrophysics Data System (ADS)

Strydom, Nadine A.; d'Hotman, Bruce D.

2005-04-01

Larval fishes were collected in the Cape Padrone surf zone on the southeast coast of South Africa, using a modified small-mesh seine net. The aim of the study was to assess the composition of fish larvae, with respect to their association with estuaries, in a surf zone that was not in close proximity to an estuary (>5 km). Sampling took place bimonthly during diurnal spring low tides between March and July 2003. In total, 544 fish were caught in the surf zone, comprising 14 families represented by 19 positively identified species, as well as an additional two species that were differentiated but remain unidentified. The families Mugilidae (65%) and Sparidae (26%) dominated the larval catch. The majority of larval fishes caught were in the postflexion stage of development, although some early juveniles were also caught. Body lengths of fish larvae ranged between 2 and 28 mm, with the majority of larvae at the recruitment size for the species. A high proportion of the fish species caught were estuary-dependent. Estuary-dependent marine fish larvae (categories I, II and IV) comprised 68% of total catch by species and 98% by number of individuals. Exclusively marine species (category III) were encountered in low numbers in the surf. The present study provides evidence for continuity in temperate South African surf zones in terms of domination by estuary-dependent larvae and reasons for this pattern are discussed.

Early migration and estuary stopover of introduced chinook salmon population in the Lapataia River Basin, southern Tierra del Fuego Island

NASA Astrophysics Data System (ADS)

Chalde, T.; Fernández, D. A.

2017-12-01

Established populations of chinook salmon (Oncorhynchus tshawytscha) have recently been reported in South America, at both Atlantic and Pacific basins. Several studies have evaluated different aspects of their life histories; however, little is known about the use of the estuaries by the juveniles of these populations. We examined spawning time, seaward migration timing, growth rate, scale patterns, diet, and geometric morphometric, contrasting the early life history during freshwater and estuary residence of a chinook population established in Lapataia Basin. Fall run spawning took place in March-April and the parr emerged in September. Two distinct seaward migration patterns were identified from sein net fishing records: one population segment migrating earlier to the estuary in October and a second group migrating later in February. The growth rate of fish captured at the estuary was significantly higher than the fish captured in freshwater. In addition, higher scale intercirculi distances were observed in estuary fish showing differences in growth rate. The feeding habitat in fish captured in both environments changed through time from bottom feeding to surface feeding and from significant diet overlap to no overlap. The morphology of the fish captured at the estuary was associated with the elongation of the caudal peduncle and a decrease in the condition factor index, both changes related to smolt transformation. The earlier migration and the higher growth rate of juveniles in the estuary together with fish of 1 + yo captured in this environment reveal that the estuary of Lapataia Basin is not only a stopover for the chinook salmon, but also a key habitat to reside and feed previous to the final seaward migration.

Polycyclic Aromatic Hydrocarbon (pah) In The Bulk Precipitation of The Seine Estuary, France

NASA Astrophysics Data System (ADS)

Motelay-Massei, A.; Ollivon, D.; Garban, B.; Chevreuil, M.

The evolution of industry and the rising of population have resulted in deep changes in the quality of the environment. Nowadays much more often the attention of analysts is focused on the presence of organic pollutants in precipitation, such as polycyclic aromatic hydrocarbons or pesticides. Atmospheric inputs play a significant role in semivolatile chemicals cycling and alter so the hydrological cycle. PAHs are semi- volatile organic contaminants of great environmental concern because of their car- cinogenic properties. PAHs are produced primarily during incomplete combustion of fossil fuels and wood. Major sources of PAHs to urban atmosphere include au- tomobile traffic, home heating, municipal incinerators and industrial emissions. De- spite their production in urban and industrial sites, PAHs occur at high concentra- tions in rural areas due to their persistence and ability to be transported over long distances. The aim of this investigation was to obtain information about occurrence of organic trace components in precipitation in the Seine Estuary. It was also of in- terest to investigate the spatial and temporal variability of PAHs in the bulk (wet and dry) deposition occurring in the estuary region and to estimate PAH deposition flux on watershed (urban, industrial or rural). Precipitation samples were collected at four locations in the Seine Estuary: the first is an industrial site (Le Havre), two are urban sites (Rouen, representative of urban area influenced by heavy traffic and Notre-Dame de Gravenchon, near from an industrial center) and the last one is ru- ral (Evreux). Each of the sites is located close to a meteorological station. Sam- pling is performed weekly since March 2001. In our analytical conditions, "total PAH" includes 15 compounds: naphthalene (NAP), acenaphtene (ACE), phenanthrene (PHE), anthracene (ANT), fluoranthene (FTH), pyrene (PYR), benzo(a)anthracene (BaA), chrysene (CHR), benzo(b)fluoranthene (BbF), benzo(k)fluoranthene (BkF), benzo(a)pyrene (BaP), dibenz(a,h)anthracene (DahA), benzo(g,h,i)perylene (BghiP) and indeno(1,2,3-cd)pyrene (IcdP). 130 precipitation samples were analyzed from March to October 2001. Analytical results indicated that PAHs were present in pre- cipitation in frequent basis. In spring the concentration of the PAHs varied between 4 ng.L-1 (Rouen, 14-21 May 2001) and 493 ng.L-1 (Le Havre, 14-21 May 2001) and were normally distributed. These values show good agreement with those measured in other sites in Europe. In addition the profile of the compounds was also similar. PHE 1 (18 to 24 %), FTH (18 to 22 %), PYR (10 to 13 %) were find in the highest concen- tration again. NAP contributed as much as 8 % to the total deposition at Le Havre, Rouen and Evreux and as 15 % at Notre-Dame de Gravenchon. This is probably due to relatively high solubility in water of NAP. Clouds arriving at our sites may contain NAP from distant as well as from local sources. The PAHs considered as carcinogenic (BaA, BbF, BkF, BaP, DahA, IcdP) by the International Association for Research on Cancer represent 14 to 25% of total PAHs. Wet deposition rates are also estimated: total fluxes ranged from 11 (Notre-Dame de Gravenchon) to 40 µg.m-2 (Le Havre) quarterly. This study assesses the seasonal and spatial variability in atmospheric de- position fluxes of these contaminants in the Seine Estuary. Spatial influences were observed and indicate both localized and long-range atmospheric source inputs and, indirectly, influence of direction and speed of winds. In addition, fluxes of PAHs seem to follow seasonal patterns, with increasing concentrations during the colder months of the year. These results highlighted the non-negligible contribution of atmospheric deposition to micropollutants supply to the watershed and consequently groundwater. Moreover, these chemical compounds, due to their high stability and residence times, could be used as tracers in the environment. 2

Recent changes in estuarine benthic and suprabenthic communities resulting from the development of harbour infrastructure.

PubMed

Dauvin, J C; Desroy, N; Janson, A L; Vallet, C; Duhamel, S

2006-01-01

Using a Before/During/After sampling protocol, the effects of the Le Havre harbour extension, which was started at the end of 2001, on the macrobenthic and suprabenthic communities in the eastern Bay of Seine (English Channel) were examined. As the construction phase has not yet been completed, the results presented here reflect only the data collected before and during the operations (September 2000 and 2002 for benthos sampling and March 2001, September 2001, October 2002 and March 2003 for suprabenthos sampling). Although bio-sedimentary changes did occur at the mouth of the Seine river, an analysis of benthic assemblages reveals that the dredging and construction operations do not seem to have influenced assemblage structure or the spatial distribution of organisms. Comparisons of the suprabenthic assemblages at each sampling date indicate that seasonal dynamics was mainly responsible for determining species distribution. We conclude that, 1 year into the harbour management plan, the observed changes in benthic and suprabenthic assemblage abundance do not exceed the range of spatial variability that exists naturally in the Seine estuary. Despite this compensatory actions designed to protect the aquatic habitats and to preserve a sustainable and healthy ecosystem have been added to the infrastructure development plan.

The influence of seine capture efficiency on fish abundance estimates in the upper Mississippi River

USGS Publications Warehouse

Holland Bartels, L. E.; Dewey, M.R.

1997-01-01

The effects of season, presence of vegetation, and time of day on seine capture efficiency for fish were evaluated using test enclosures in the upper Mississippi River. Overall capture efficiency of the seine haul was 49% (53% during the day and 43% at night). During daytime tests, the efficiency ranged from 39% to 74% but did not differ statistically between sites or among dates. At night, the efficiency was higher at the vegetated than at the nonvegetated site (55% vs 32%) and declined through time from 56% in May to 28% in October. Although susceptibility to capture differed among taxa, we could not predict either total catch efficiency or efficiency within a given taxon for a given sample. Adjustment of catch data with various estimates of efficiency reduced the mean absolute error for all sampling dates from 51% to 24%, but the error of the adjusted data still ranged from -58% to +54% on any given sampling date. These results indicate that it is difficult to make accurate adjustment of catch data to compensate for gear bias in studies of seasonal habitat use.

Natural radionuclides (210)Po and (210)Pb in the Delaware and Chesapeake Estuaries: modeling scavenging rates and residence times.

PubMed

Marsan, D; Rigaud, S; Church, T

2014-12-01

During the spring and summer months of 2012, (210)Po and (210)Pb activity were measured in the dissolved and particulate phases from the Delaware and upper Chesapeake estuaries. The upper Delaware estuary, near the freshwater end member, was characterized by high-suspended matter concentrations that scavenged dissolved (210)Po and (210)Pb. Box models were applied using mass balance calculations to assess the nuclides residence times in each estuary. Only 60% of the dissolved (210)Po and 55% of the dissolved (210)Pb from the Delaware estuary were exported to coastal waters. A large fraction of soluble (210)Po and (210)Pb within the estuary was either reversibly adsorbed onto suspended particles, trapped in sediment accumulation zones (such as intertidal marshes), bioaccumulated into phytoplankton and discharged to the coastal ocean. The upper Chesapeake estuary was largely characterized by sub-oxic bottom waters that contained higher concentrations of dissolved (210)Po and (210)Pb, hypothesized to be subjected to redox cycling of manganese. The Delaware and Chesapeake estuary mean residence times for (210)Po differed significantly at 86 ± 7 and 126 ± 10 days respectively, while they were similar for (210)Pb (67 ± 6-55 ± 5 days). The difference in residence times corresponds to the greater extent of biogeochemical scavenging and regeneration processes within the upper Chesapeake. Copyright © 2014 Elsevier Ltd. All rights reserved.

Comparisons between the characteristics of ichthyofaunas in nearshore waters of five estuaries with varying degrees of connectivity with the ocean

NASA Astrophysics Data System (ADS)

Hoeksema, S. D.; Chuwen, B. M.; Potter, I. C.

2009-10-01

The characteristics of the fish faunas in nearshore, shallow (<1.2 m) waters of the basins of estuaries along the same coastline, but which were open to the ocean for varying periods, have been determined and compared. The fish faunas of the permanently-open Oyster Harbour, the seasonally-open Broke, Irwin and Wilson inlets and the normally-closed Wellstead Estuary on the south coast of Western Australia were sampled by seine net seasonally for 2 years. Irrespective of the frequency and duration that the estuary mouth was open, the ichthyofauna of each estuary was numerically dominated by three atherinid species and three gobiid species (92.9-99.7%), each of which completes its life cycle within these estuaries. The ichthyofaunal compositions of each estuary differed significantly, however, from that of each other estuary. These differences were largely attributable to the relative abundances of the above six species varying between estuaries, which, in turn, reflected differences in such factors as estuary mouth status, macrophyte cover and salinity. For example, Favonigobius lateralis and Leptatherina presbyteroides, which are also represented by marine populations, were most abundant in the permanently-open estuary (Oyster Harbour), which, in terms of substrate and salinity, most closely resembled the nearshore marine environment. In contrast, Leptatherina wallacei made its greatest contribution in the only estuary to exhibit a protracted period of greatly reduced salinities, which is consistent with its distribution in permanently-open estuaries on the lower west coast of Australia, while Atherinosoma elongata and Pseudogobius olorum were particularly numerous in estuaries containing dense stands of the seagrass Ruppia megacarpa. Marine species made the greatest contribution to species richness in the permanently-open estuary and least in the normally-closed estuary. Species richness was greatest in summer and least in winter in each estuary, but differed markedly between years only in Wilson Inlet. Density of fishes was greatest in the most eutrophic estuary (Wellstead Estuary) and least in the most oligotrophic estuary (Broke Inlet) and only underwent marked seasonal variations in Wilson Inlet and Wellstead Estuary, in which densities fell to their minima in winter. Ichthyofaunal composition varied between years in the Broke and Wilson inlets and Wellstead Estuary, in which there was little or no connection with the ocean in one of those years. Species composition underwent progressive seasonal changes throughout the year in Wellstead Estuary, due to the abundance of certain species peaking at different times of the year.

Winter nutrient behaviours in the Pearl River estuary

NASA Astrophysics Data System (ADS)

Wang, G.; Jin, S.; Du, M.

2017-12-01

Nutrient (nitrate, nitrite, ammonium, phosphate, and silicate) mapping and time-series investigation were carried out in winter in the Pearl River estuary, China. These nutrients behaved non-conservatively in the upper estuary. In the middle and lower estuary, however, nitrate and silicate seemed to be controled by physical mixing, while additions of nitrite, ammonium, and phosphate were found in the middle estuary. Nitrate was the dominant disslved inorganic nitrogen, with a fraction of more than 2/3. From the upper to the lower estuary the N:P ratio decreased from more than 200 to near the Redfield ratio of 16. Nutrients near the surface behaved almost the same as near the bottom in the water column at both the uppper and lower estuary. During a tidal cycle these nutrients seemed to be regulated more by physical mixing than by other processes.

Environmental features and macrofauna of Kahana Estuary, Oahu, Hawaii

USGS Publications Warehouse

Maciolek, J.A.; Timbol, A.S.

1981-01-01

Lack of ecological information on Hawaiian estuaries prompted an intensive 2-year study of a small (5.7 ha) stream-mouth estuary on windward Oahu. Water quality and macrofauna were sampled weekly at seven stations. The water mass was strongly stratified vertically except during freshets. Average values for water column temperature and bottom salinity were 23.2°C and 12‰ at the head to 28.3°C and 28‰ at the mouth. Dissolved oxygen saturation in the water column varied from about 50% at night to 140% in the afternoon. Usually, bottom waters were 3–6°C warmer than surface waters and sometimes showed severe oxygen depletion.Macrofauna, collected primarily by seining, consisted mainly of decapod crustaceans (four species of crabs, seven species of shrimps) and fishes (24 species). Other typical estuarine taxons (mollusks, barnacles, polychaetes) were scarce or absent. Diversity increased seaward from 14 species near the estuary head to 29 species near the mouth. Three species of crustaceans and six of fishes were captured at all stations. Most abundant were the native prawn, Macrobrachium grandimanus, and mullet, Mugil cephalus. Perennially resident adults occurred among crustaceans and gobioid fishes; most other fishes were present as juveniles and sporadic adults. Comparisons with other data suggest that more than 50 species of native fishes may occur in Hawaiian estuaries, and that estuarine macrofaunal diversity on oceanic islands is much lower than on continents at similar latitudes.

Comparative analysis of different survey methods for monitoring fish assemblages in coastal habitats.

PubMed

Baker, Duncan G L; Eddy, Tyler D; McIver, Reba; Schmidt, Allison L; Thériault, Marie-Hélène; Boudreau, Monica; Courtenay, Simon C; Lotze, Heike K

2016-01-01

Coastal ecosystems are among the most productive yet increasingly threatened marine ecosystems worldwide. Particularly vegetated habitats, such as eelgrass (Zostera marina) beds, play important roles in providing key spawning, nursery and foraging habitats for a wide range of fauna. To properly assess changes in coastal ecosystems and manage these critical habitats, it is essential to develop sound monitoring programs for foundation species and associated assemblages. Several survey methods exist, thus understanding how different methods perform is important for survey selection. We compared two common methods for surveying macrofaunal assemblages: beach seine netting and underwater visual census (UVC). We also tested whether assemblages in shallow nearshore habitats commonly sampled by beach seines are similar to those of nearby eelgrass beds often sampled by UVC. Among five estuaries along the Southern Gulf of St. Lawrence, Canada, our results suggest that the two survey methods yield comparable results for species richness, diversity and evenness, yet beach seines yield significantly higher abundance and different species composition. However, sampling nearshore assemblages does not represent those in eelgrass beds despite considerable overlap and close proximity. These results have important implications for how and where macrofaunal assemblages are monitored in coastal ecosystems. Ideally, multiple survey methods and locations should be combined to complement each other in assessing the entire assemblage and full range of changes in coastal ecosystems, thereby better informing coastal zone management.

Seasonal, inter-annual and decadal changes of carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) in the Scheldt estuary (Belgium, The Netherlands)

NASA Astrophysics Data System (ADS)

Borges, Alberto V.; Middelburg, Jack J. B.; Chou, Lei; Kromkamp, Jacco; Houtekamer, Marco; Harlay, Jérôme

2014-05-01

We carried out monthly cruises to study the seasonal and spatial variations of the partial pressure of carbon dioxide CO2 (pCO2), methane (CH4) and nitrous oxide (N2O) concentrations in the Scheldt estuary, a strongly human impacted system located in Belgium and the Netherlands. This survey was initiated in 2008 for pCO2, and from 2009 onwards for methane (CH4) and nitrous oxide (N2O). In the lower estuary, pCO2 strongly decreased and oxygen saturation level (%O2) strongly increased during the spring phytoplankton bloom. In the upper estuary, two yearly maxima of pCO2 coinciding with minima of %O2 occurred in spring and fall due to enhanced nitrification and/or net heterotrophy. In the upper estuary, pCO2 decreased in winter due to lower temperature (affecting solubility and inhibiting biological activity). pCO2 also decreased in summer due to increase in primary production and decrease of net heterotrophy. In the upper estuary, maxima of CH4 were observed in winter due to enhanced river inputs (high discharge) while in the lower estuary higher CH4 was observed in summer. This was probably due to inputs of CH4 from inter-tidal areas at the mouth of estuary that increased in summer due to higher temperatures and higher organic matter availability. N2O also showed higher values during winter in the upper estuary, but in summer N2O was low in the lower estuary due to decreased solubility due to higher temperature. During winter 2009, extremely high N2O values were observed in the upper estuary, up to 3257 nM (23738% saturation). This was related to the problems encountered by the Brussels North waste water treatment plant (WWTP) in late 2009. One of the collectors of the station was shut down in 25 November 2009, and by 8 December 2009, the whole WWTP was shut down and the waste-water was delivered directly to the Rupel. Extremely high N2O values were observed in the upper estuary on 7 December 2009, and abnormally high N2O values (compared to other years) persisted until April 6 2010. The comparison of present day N2O values with historical data obtained in 1993-1997 and 1978 shows a spectacular decrease of N2O levels from maximal values of about 350 nmol L-1 in the 1990's to 50 nmol L-1 in 2009-2012. This decrease reflects the collapse of NH4+ concentrations in the estuary due to the overall improvement of water quality in relation to the implementation of WWTPs, leading to a decrease of nitrification rates. The maximum of N2O concentration in 1978 was located between salinities 10-15, in the 1990's it was located between salinities 2 and 5, and nowadays it is located at salinities < 2.5. This suggests that the maximum of nitrification has migrated upstream in the estuary.

Preliminary Evidence for the Amplification of Global Warming in Shallow, Intertidal Estuarine Waters.

PubMed

Oczkowski, Autumn; McKinney, Richard; Ayvazian, Suzanne; Hanson, Alana; Wigand, Cathleen; Markham, Erin

2015-01-01

Over the past 50 years, mean annual water temperature in northeastern U.S. estuaries has increased by approximately 1.2°C, with most of the warming recorded in the winter and early spring. A recent survey and synthesis of data from four locations in Southern Rhode Island has led us to hypothesize that this warming may be amplified in the shallow (<1 m), nearshore portions of these estuaries. While intertidal areas are not typically selected as locations for long-term monitoring, we compiled data from published literature, theses, and reports that suggest that enhanced warming may be occurring, perhaps at rates three times higher than deeper estuarine waters. Warmer spring waters may be one of the factors influencing biota residing in intertidal regions both in general as well as at our specific sites. We observed greater abundance of fish, and size of Menidia sp., in recent (2010-2012) seine surveys compared to similar collections in 1962. While any linkages are speculative and data are preliminary, taken together they suggest that shallow intertidal portions of estuaries may be important places to look for the effects of climate change.

High Levels of Sediment Contamination Have Little Influence on Estuarine Beach Fish Communities

PubMed Central

McKinley, Andrew C.; Dafforn, Katherine A.; Taylor, Matthew D.; Johnston, Emma L.

2011-01-01

While contaminants are predicted to have measurable impacts on fish assemblages, studies have rarely assessed this potential in the context of natural variability in physico-chemical conditions within and between estuaries. We investigated links between the distribution of sediment contamination (metals and PAHs), physico-chemical variables (pH, salinity, temperature, turbidity) and beach fish assemblages in estuarine environments. Fish communities were sampled using a beach seine within the inner and outer zones of six estuaries that were either heavily modified or relatively unmodified by urbanization and industrial activity. All sampling was replicated over two years with two periods sampled each year. Shannon diversity, biomass and abundance were all significantly higher in the inner zone of estuaries while fish were larger on average in the outer zone. Strong differences in community composition were also detected between the inner and outer zones. Few differences were detected between fish assemblages in heavily modified versus relatively unmodified estuaries despite high concentrations of sediment contaminants in the inner zones of modified estuaries that exceeded recognized sediment quality guidelines. Trends in species distributions, community composition, abundance, Shannon diversity, and average fish weight were strongly correlated to physico-chemical variables and showed a weaker relationship to sediment metal contamination. Sediment PAH concentrations were not significantly related to the fish assemblage. These findings suggest that variation in some physico-chemical factors (salinity, temperature, pH) or variables that co-vary with these factors (e.g., wave activity or grain size) have a much greater influence on this fish assemblage than anthropogenic stressors such as contamination. PMID:22039470

Spatial variations in biomarkers of Mytilus edulis mussels at four polluted regions spanning the Northern Hemisphere

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gagne, F.; Burgeot, T.; Hellou, J.

2008-06-15

Economic and social developments have taken place at the expense of the health of the environment, both locally and on a global scale. In an attempt to better understand the large-scale effects of pollution and other stressors like climate change on the health status of Mytilus edulis, mussels were collected during the first two weeks of June 2005 at three sites (one pristine and two affected by pollution) located in each of the regions of the Canadian West Coast, the St. Lawrence estuary, the Atlantic East Coast and the northwestern coast of France, covering a total distance of some 11more » 000 km. The mussels were analyzed for morphologic integrity (condition factor), gametogenic activity (gonado-somatic and gonad maturation index, vitellogenin(Vtg)-like proteins), energy status (temperature-dependent mitochondrial electron transport activity and gonad lipid stores), defense mechanisms (glutathione S-transferase, metallothioneins, cytochrome P4503A activity and xanthine oxidoreductase-XOR), and tissue damage (lipid peroxidation-LPO and DNA strand breaks). The results showed that data from the reference sites in each region were usually not normally distributed, with discriminant factors reaching the number of regions (i.e. four), except for the biomarkers gonadal lipids, XOR and LPO in digestive gland. The integrated responses of the biomarkers revealed that biomarkers of stress were significantly more pronounced in mussels from the Seine estuary, suggesting that the impacts of pollution are more generalized in this area. Mussels from the Seine estuary and the Atlantic East Coast (Halifax Harbor) responded more strongly for Vtg-like proteins, but was not related to gonad maturation and gonado-somatic indexes, suggesting the presence of environmental estrogens. Moreover, these mussels displayed reduced DNA repair activity and increased LPO. Factorial analyses revealed that energy status, cytochrome P4503A activity and Vtg-like proteins were the most important biomarkers. Adaptation to warmer temperatures was reflected at the energy status levels, mussels from both the polluted and warmer sites displaying increased ratios of mitochondrial activity to lipid stores. Regional observations of biomarkers of energy status, gametogenesis and pollutant-related effects were influenced by nutrition, oxygen availability (eutrophication), and thermal history.« less

Optimal and centralized reservoir management for drought and flood protection via Stochastic Dual Dynamic Programming on the Upper Seine-Aube River system

NASA Astrophysics Data System (ADS)

Chiavico, Mattia; Raso, Luciano; Dorchies, David; Malaterre, Pierre-Olivier

2015-04-01

Seine river region is an extremely important logistic and economic junction for France and Europe. The hydraulic protection of most part of the region relies on four controlled reservoirs, managed by EPTB Seine-Grands Lacs. Presently, reservoirs operation is not centrally coordinated, and release rules are based on empirical filling curves. In this study, we analyze how a centralized release policy can face flood and drought risks, optimizing water system efficiency. The optimal and centralized decisional problem is solved by Stochastic Dual Dynamic Programming (SDDP) method, minimizing an operational indicator for each planning objective. SDDP allows us to include into the system: 1) the hydrological discharge, specifically a stochastic semi-distributed auto-regressive model, 2) the hydraulic transfer model, represented by a linear lag and route model, and 3) reservoirs and diversions. The novelty of this study lies on the combination of reservoir and hydraulic models in SDDP for flood and drought protection problems. The study case covers the Seine basin until the confluence with Aube River: this system includes two reservoirs, the city of Troyes, and the Nuclear power plant of Nogent-Sur-Seine. The conflict between the interests of flood protection, drought protection, water use and ecology leads to analyze the environmental system in a Multi-Objective perspective.

Primary Productivity Regime and Nutrient Removal in the Danube Estuary

NASA Astrophysics Data System (ADS)

Humborg, C.

1997-11-01

The primary productivity regime, as well as the distribution of dissolved inorganic nutrients and particulate organic matter in the Danube estuary, were investigated during several cruises at different discharge regimes of the Danube River. The shallowness of the upper surface layer due to insignificant tidal mixing and strong stratification of the Danube estuary, as well as the high nutrient concentrations, are favourable for elevated primary production. The incident light levels at the bottom of the upper surface layer of the water column (0·5-3·0 m) were generally higher than 20% of the surface irradiance. Elevated chlorophyll (Chl) aconcentrations with maxima at mid salinities were found during each survey. Within the upper mixed layer estimated primary production of 0·2-4·4 g m-2day-1is very high compared with estuaries of other major world rivers. Mixing diagrams of dissolved inorganic nutrients reveal removal of significant quantities of nutrients during estuarine mixing. These observations were consistent with the distribution of particular organic matter, which was negatively correlated to the nutrient distribution during each survey. C:Chl aratios, as well as the elevated estimated production, indicate that biological transformation processes govern the nutrient distribution in this estuary.

EFFECTS OF EROSION AND MACROALGAE ON INTERTIDAL EELGRASS (ZOSTERA MARINA) IN A NORTHEASTERN PACIFIC ESTUARY (USA)

EPA Science Inventory

Eelgrass (Zostera marina) in open-coast northeastern Pacific estuaries is primarily intertidal, yet little research has been done on the natural factors controlling its upper intertidal growth limits. This two-year study in the Yaquina Estuary (Newport, Oregon, USA) evaluated the...

What role do beds of submerged macrophytes play in structuring estuarine fish assemblages? Lessons from a warm-temperate South African estuary

NASA Astrophysics Data System (ADS)

Sheppard, Jill N.; James, Nicola C.; Whitfield, Alan K.; Cowley, Paul D.

2011-11-01

Habitat variability is one of the factors influencing species richness within estuarine systems, and a loss of habitat can result in a restructuring of the estuarine ichthyofaunal assemblage, particularly if these conditions persist over long time periods. The potential effects of the loss of extensive submerged macrophyte beds ( Ruppia cirrhosa and Potamogeton pectinatus) on an estuarine fish assemblage were investigated through an analysis of a long-term seine net catch dataset from the temporarily open/closed East Kleinemonde Estuary, South Africa. Catch data for a 12-year period, encompassing six years of macrophyte presence and six years of macrophyte senescence, indicated that the loss of this habitat did not influence species richness but changes in the relative abundance of certain species were evident. A shift in dominance from vegetation-associated species to those associated with sandy environments ( e.g. members of the family Mugilidae) was observed. However, species wholly dependent on macrophytes such as the critically endangered estuarine pipefish Syngnathus watermeyeri were only recorded during years when macrophyte beds were present, while vegetation-associated species such as the sparid Rhabdosargus holubi persisted at lower levels of relative abundance. The reduced abundance of all vegetation-associated fish species during years of macrophyte senescence was probably reflective of declining food resources resulting from the loss of macrophyte beds and/or increased vulnerability to predation. Submerged beds of aquatic plants are therefore important habitats within temporarily open/closed estuaries, South Africa's dominant estuary type.

Changes in a temperate estuary during the filling of the biggest European dam.

PubMed

Morais, Pedro; Chícharo, Maria Alexandra; Chícharo, Luís

2009-03-15

This study aimed to determine whether and how the disruption of river flow, during the filling of the Alqueva dam, influenced the variability of abiotic and biotic factors in the Guadiana estuary, particularly the abundance and distribution of anchovy eggs. River inflow was found to be the most important factor in determining abiotic and biotic variability in the Guadiana estuary. Seasonal patterns were obscured by long periods of low inflow (mid April to early December 2002), which caused marked changes in the estuary. The estuarine turbidity maximum zone was displaced towards the upper estuary, to at least 38 km from the river mouth, 8 to 16 km upstream from previous records. The dynamics of nutrient stoichiometry was also affected. In the upper and middle estuary, P was more potential limiting than N and potential Si limitation was only frequent on the coast, with direct and/or indirect influence in changing phytoplankton dynamics and composition. Previously, the upper estuary alternated between potential P limitation during winter, Si limitation during spring and mid summer and N limitation during mid summer and autumn. The flooding of vast areas in the catchment of the dam probably caused the increase of DSi concentrations, as well as maximal N and P loadings. The abundance of larval stages of anchovy decreased, putatively because estuarine productivity has also decreased. In April 2002 there was an uncontrolled discharge from the Alqueva dam, which reduced the abundance of anchovy eggs by 99.99%. It is suggested that dam managers should mimic, as much as possible, the natural river flow, in order to minimize the impact on downstream ecosystems. Management efforts should not be restricted to the areas upstream of the dam, but should also encompass the estuary and adjacent coastal area.

Gill parasites of fish from two estuaries in northeastern Brazil: new hosts and geographical records.

PubMed

Golzio, Jéssica E S A; Falkenberg, Júlia M; Praxedes, Rayssa C G; Coutinho, Anderson S; Laurindo, Mylena K; Pessanha, André; Madi, Rubens R; Patrício, Joana; Vendel, Ana L; Souza, Geza T R; Melo, Cláudia M; Lacerda, Ana Carolina F

2017-01-01

Parasites are important components of communities and constitute great part of the biological diversity found in ecosystems, providing valuable information about their hosts and the environment in which they live. However, despite its importance, parasitic diversity is still not well known in some regions of Brazil, especially with respect to fish parasites in the Northeast Region. The present study aims to perform the survey of gill parasites of fish from two tropical estuaries located in northeastern Brazil: Paraíba and Mamanguape rivers. Two collections were made in each estuary, one during the dry period (November / 2013) and the other during the rainy season (July / 2014). The fish were caught using a beach seine net, dragged along the main channel margin. After the identification, biometry and necropsy of the fish, their parasites were collected, stored and identified. For each species of parasite, the values ​​of prevalence, mean intensity and mean abundance were calculated. Of the 882 examined fish, belonging to four species, 145 were parasitized by at least one species of parasite. In total, 18 taxa of parasites of the groups Monogenea, Digenea, Nematoda, Copepoda and Isopoda were recorded, being the copepod Acusicola brasiliensis the most abundant species of parasite.

CO2 emissions from a temperate drowned river valley estuary adjacent to an emerging megacity (Sydney Harbour)

NASA Astrophysics Data System (ADS)

Tanner, E. L.; Mulhearn, P. J.; Eyre, B. D.

2017-06-01

The Sydney Harbour Estuary is a large drowned river valley adjacent to Sydney, a large urban metropolis on track to become a megacity; estimated to reach a population of 10 million by 2100. Monthly underway surveys of surface water pCO2 were undertaken along the main channel and tributaries, from January to December 2013. pCO2 showed substantial spatio-temporal variability in the narrow high residence time upper and mid sections of the estuary, with values reaching a maximum of 5650 μatm in the upper reaches and as low as 173 μatm in the mid estuary section, dominated by respiration and photosynthesis respectively. The large lower estuary displayed less variability in pCO2 with values ranging from 343 to 544 μatm controlled mainly by tidal pumping and temperature. Air-water CO2 emissions reached a maximum of 181 mmol C m-2 d-1 during spring in the eutrophic upper estuary. After a summer high rainfall event nutrient-stimulated biological pumping promoted a large uptake of CO2 transitioning the Sydney Harbour Estuary into a CO2 sink with a maximum uptake of rate of -10.6 mmol C m-2 d-1 in the mid-section of the estuary. Annually the Sydney Harbour Estuary was heterotrophic and a weak source of CO2 with an air-water emission rate of 1.2-5 mmol C m-2 d-1 (0.4-1.8 mol C m-2 y-1) resulting in a total carbon emission of around 930 tonnes per annum. CO2 emissions (weighted m3 s-1 of discharge per km2 of estuary surface area) from Sydney Harbour were an order of magnitude lower than other temperate large tectonic deltas, lagoons and engineered systems of China, India, Taiwan and Europe but were similar to other natural drowned river valley systems in the USA. Discharge per unit area appears to be a good predictor of CO2 emissions from estuaries of a similar climate and geomorphic class.

Allochthonous Organic Matter Subsidize the High Secondary Production of the Invasive Bivalve Corbicula fluminea in Minho Estuary (N-Portugal)

EPA Science Inventory

The Asian clam Corbicula fluminea is one of the most invasive species in freshwater ecosystems. In Minho estuary, this species colonize all the middle and upper part of the estuary, dominating the abundance, biomass and secondary production in River Minho tidal freshwater area (T...

Mercury biomagnification through food webs along a salinity gradient down-estuary from a biological hotspot

NASA Astrophysics Data System (ADS)

Rumbold, Darren G.; Lange, Ted R.; Richard, Doug; DelPizzo, Gina; Hass, Nicole

2018-01-01

To examine down-estuary effects and how differences in food webs along a salinity gradient might influence mercury (Hg) biomagnification, we conducted a study from 2010 to 2015 in an estuary with a known biological hotspot at its headwaters. Over 907 samples of biota, representing 92 different taxa of fish and invertebrates, seston and sediments were collected from the upper, middle and lower reach for Hg determination and for stable nitrogen and carbon isotope analyses. Trophic magnification slopes (TMS; log Hg versus δ15N), as a measure of biomagnification efficiency, ranged from 0.23 to 0.241 but did not differ statistically among reaches. Hg concentrations were consistently highest, ranging as high as 4.9 mg/kg in top predatory fish, in the upper-reach of the estuary where basal Hg entering the food web was also highest, as evidenced by methylmercury concentrations in suspension feeders. Top predatory fish at the mouth of the estuary contained relatively low [THg], likely due to lower basal Hg. This was nonetheless surprising given the potential for down-estuary biotransport.

Analyze of waves dynamic over an intertidal mudflat of a sandy-gravely estuarine beach - Field survey and preliminary modeling approach

NASA Astrophysics Data System (ADS)

Morio, Olivier; Sedrati, Mouncef; Goubert, Evelyne

2014-05-01

As well as marine submersion or erosive phenomena, clay-silted sediment in-filling on estuarial and bay beaches are a main issue in these human-attractive areas. Coupled sandy/gravely and clay/silty intertidal areas can be observed in these particular coastal areas, depending of rivers characteristic (discharge of particle, water flow), ocean dynamics (wave exposure, current) and sediments sources. All around the world, sandy/gravely beaches are exposed to punctual or continuous input clay sediments. Vilaine estuary, Bay of Arcachon and Bay of Seine in France, Plymouth Bay in UK and also Wadden Sea in Deutschland are few examples of muddy/sandy coupled or mixed system. The beach of Bétahon (Ambon town, Brittany - France) is located on the external Vilaine estuary and is an example of this issue. This meso-macrotidal intermediate (low tide terrace) beach presents heterogeneous sediments. The upper intertidal zone is composed by sand and gravel and characterized by a steep slope. A very gentle slope characterized the lower part of the beach and is constituted by silt and clay. Clay/sand limit is characterized by a decimetric erosion cliff of mudflat along the beach. In order to understand bed variations and sediment transport of this complex heterogeneous beach, a well understanding of wave dynamic across the beach is necessary. This study focus on wave dynamics over the beach, using field observations and MIKE 21 3D wave numerical model. This paper is a preliminary approach of an upcoming global understanding of this estuarial beach behavior. Swell from deep-sea to near-shore area is modeled over a 100 km² area and real wind, deep sea wave characteristic, river water flow and tidal level are defined as open boundary conditions for the regional model. This last one is based on multiple bathymetric surveys over the last 50 years. Local model, triangular mesh gridded to 5 meters, covering Bétahon beach , is based on topographic and photographic survey of the mudflat since 2005 (an amplitude above 1.4 meters has been observed over a start reference state). Modeling significant wave height, wave direction and period are compared to a cross-shore wave dynamics survey over the beach, during one week. Surf zone positions over the beach, wave characteristics at local and regional scales, impacts of mudflat altitude on waves are analyzed and discussed.

HYDRODYNAMIC SIMULATION OF THE UPPER POTOMAC ESTUARY.

USGS Publications Warehouse

Schaffranck, Raymond W.

1986-01-01

Hydrodynamics of the upper extent of the Potomac Estuary between Indian Head and Morgantown, Md. , are simulated using a two-dimensional model. The model computes water-surface elevations and depth-averaged velocities by numerically integrating finite-difference forms of the equations of mass and momentum conservation using the alternating direction implicit method. The fundamental, non-linear, unsteady-flow equations, upon which the model is formulated, include additional terms to account for Coriolis acceleration and meteorological influences. Preliminary model/prototype data comparisons show agreement to within 9% for tidal flow volumes and phase differences within the measured-data-recording interval. Use of the model to investigate the hydrodynamics and certain aspects of transport within this Potomac Estuary reach is demonstrated. Refs.

Distinct Aeromonas Populations in Water Column and Associated with Copepods from Estuarine Environment (Seine, France)

PubMed Central

Chaix, Gautier; Roger, Frédéric; Berthe, Thierry; Lamy, Brigitte; Jumas-Bilak, Estelle; Lafite, Robert; Forget-Leray, Joëlle; Petit, Fabienne

2017-01-01

Aeromonas spp. are ubiquitous bacteria primarily recovered from aquatic ecosystems. They are found in fresh water as well as estuarine and marine waters, and in association with numerous autochthonous aquatic organisms in these environments. However, aeromonads are also etiologic agents of fish diseases and are now recognized as emerging pathogens in humans. The estuary is therefore a key environment, harboring autochthonous aeromonads, and aeromonads originating from humans and animals, mainly released by treated WWTP effluent or watershed run-off via tributaries. The present study compares the abundance and the diversity of Aeromonas populations. Over 2 years of monitoring (eight campaigns from February 2013 to November 2015), the occurrence of Aeromonas was investigated within the water column (water and fluid mud) and in association with copepods. Moreover, the diversity of Aeromonas populations was ascertained by analyzing gyrB and radA sequences, and the antibiotic-resistance phenotypes were determined using the disk diffusion method. This study shows, for the first time, the presence of Aeromonas spp. in water (1.1 × 102 to 1.2 ± 0.3 × 103 CFU.100 mL-1), fluid mud (2.6 ± 2.6 × 102 to 9.8 ± 0.9 × 103 CFU.g-1) and in association with living copepods (1.9 ± 0.7 × 102 to >1.1 × 104 CFU.g-1) in the Seine estuary. Moreover, the diversity study, conducted on 36 strains isolated from the water column and 47 strains isolated from copepods, indicates distinct populations within these two compartments. Strains distributed in five clusters corresponding to A. bestiarum (n = 6; 5.45%), A. encheleia (n = 1; 0.91%), A. media (n = 22; 20.0%), A. rivipollensis (n = 34; 30.91%) and A. salmonicida (n = 47; 42.73%). A. salmonicida is the most abundant species associated with Eurytemora affinis (n = 35; 74.47%). In contrast, A. salmonicida accounts for only 30.56% (n = 11) of isolates in the water column. This study shows the coexistence of distinct populations of Aeromonas in the oligohaline area of an anthropized estuary. Moreover, A. media, a putative human pathogen, present in the water column and abundant in the WWTP samples, was not detected in association with living copepods. PMID:28744262

Nitrogen distribution in a tropical urbanized estuarine system in northeastern Brazil.

PubMed

Dos Santos, Celimarcos Bezerra; Silva, Maria Aparecida Macêdo; de Souza, Marcelo F Landim; da Silva, Daniela Mariano Lopes

2018-01-08

Nitrogen enters estuaries mostly through fluvial discharge and tide, although anthropogenic sources are known to influence the amount of this element in these aquatic ecosystems. Thus, the objective of this work was to verify which river (Cachoeira, Fundão, and/or Santana) exerts greater influence on the distribution of dissolved N forms (Dissolved Organic Nitrogen and Dissolved Inorganic Nitrogen = NH 3 /NH 4 + , NO 2 - , and NO 3 - ) along a tropical urbanized estuarine system in northeastern Brazil. The studies estuarine system lies with in urban municipality, and the upper portion of the Cachoeira river estuary receives the treated effluent from this municipality through a sewage treatment station and untreated effluents from nearby villages. The selected sampling stations were located near the outfall of the rivers in the estuaries to the treatment plant and the villages. Of all the nitrogen forms, dissolved organic nitrogen (DON) prevailed in the estuarine system, followed by nitrate (NO 3 - ) as the main inorganic form. The highest concentrations were recorded in the fluvial portion and upper estuary of Cachoeira river in the dry season. Based on the N concentrations found in the estuarine system, Cachoeira river has the greatest anthropogenic influence due to the amount of untreated effluents from the villages and treated effluents from the sewage treatment plant (STP) in the upper portion of the estuary.

Lignin geochemistry of sediments from the Narragansett Bay Estuary

NASA Astrophysics Data System (ADS)

Requejo, A. G.; Brown, John S.; Boehm, Paul D.

1986-12-01

Cupric oxide oxidation has been employed to characterize the lignin geochemistry of Narragansett Bay sediments. Lignin concentrations throughout the estuary are low when expressed on a carbon-normalized basis, but can be characterized as enriched when expressed on a mass-normalized basis. This implies substantial dilution of the sedimentary lignin by inputs of lignin-poor carbon. Lignin concentrations do not correlate with the 13C isotopic composition of the sedimentary organic matter. These results are consistent with a sediment lignin component consisting of varying amounts of vascular plant debris and lignin-depleted organic matter, the latter originating from both marine (planktonic) and terrestrial (uncharacterized) sources. Compositional plots of lignin-derived phenols show that sediments in the upper estuary are influenced to a greater extent by gymnosperm lignin sources than those in the mid-and lower estuary. Given the extent to which the upper estuary is affected by pollution sources, inputs from anthropogenic discharges are the most likely cause of these compositional differences. However, an evaluation of processed paper products as an "anthropogenic" lignin source indicates that the lignin content of these materials is insufficient to account for the levels found in the sediments. Subsurface lignin compositions at an upper estuary site reveal that lignin originating from the inferred anthropogenic sources disappears at a depth shallower than that which would be expected based on the distribution of other trace organic pollutants (hydrocarbons and several synthetic organic compounds). We speculate that differences in either the depositional history or the degree of preservation of these two compound classes are responsible for the observed trends.

DCERP Annual Technical Report III: March 2009-February 2010. Executive Summary

DTIC Science & Technology

2010-04-01

groundwater passing though marshes to the estuary. Loading estimates may vary considerably depending on inter-annual hydrologic (storm versus drought ...climatic events (i.e., hurricanes and droughts ); and integrate results with the other DCERP modules. The benefits of the Aquatic/Estuarine Module...inter-annual hydrologic (storm versus drought years) variability. ▪ Several large phytoplankton blooms in mid-estuary to upper estuary locations

The geochemistry of Seine River Basin particulate matter: Distribution of an integrated metal pollution index

USGS Publications Warehouse

Meybeck, Michel; Horowitz, A.J.; Grosbois, C.

2004-01-01

Spatial analysis (1994-2001) and temporal trends (1980-2000) for particulate-associated metals at key stations in the Seine River Basin have been determined using a new metal pollution index (MPI). The MPI is based on the concentrations of Cd, Cu, Hg, Pb and Zn, normalized to calculated background levels estimated for each particulate matter samples for four fractions (clays and other aluminosilicates, carbonates, organic matter, and quartz). Background levels ascribed to each fraction were determined from a specific set of samples collected from relatively pristine areas in the upper Seine basin and validated on prehistoric samples. The unitless MPI is designed to vary between 0 for pristine samples to 100 for the ones extremely impacted by human activities and to assess the trends of general metal contamination and its mapping. Throughout the Seine basin, MPI currently range from 1 to 40, but values exceeding 100 have been found in periurban streams and the Eure tributary. Based on the MPI spatial distribution, the Seine River Basin displays a wide range of anthropogenic impacts linked to variations in population density, stream order, wastewater discharges and industrial activities. Correlations between the MPI and other trace elements indicate that anthropogenic impacts also strongly affect the concentrations of Ag, Sb, and P, marginally affect the concentrations of Ba, Ni, and Cr, and appear to have little effect on the concentrations of Li, Be, V, Co, and the major elements. Temporal MPI trends can also be reconstituted from past regulatory surveys. In the early 1980s, MPI were 2-5 times higher than nowadays at most locations, particularly downstream of Greater Paris where it reached levels as high as 250 (now 40), a value characteristic of present Paris urban sewage. The exceptional contamination of the Seine basin is gradually improving over the last 20 years but remains very high. ?? 2004 Elsevier B.V. All rights reserved.

Contrasting mercury and manganese deposition in a mangrove-dominated estuary (Guaratuba Bay, Brazil)

NASA Astrophysics Data System (ADS)

Sanders, C. J.; Santos, I. R.; Silva-Filho, E. V.; Patchineelam, S. R.

2008-08-01

Sediment cores were taken at seven sites along the mangrove-bound Guaratuba Bay estuary (southern Brazil), with the purpose of assessing conditions controlling Hg deposition along a horizontal estuarine sediment gradient. The data suggest contrasting depositional patterns for Hg and Mn in this relatively pristine setting. Total Hg contents of bulk sediments ranged from 12 to 36 ng/g along the estuary, the highest values being found in muddier organic-rich sediments of the upper estuary (the corresponding mud gradient is 12 to 42 wt.%, and the organic matter gradient 4 to 10 wt.%). Thus, the deposition of fine sediments relatively enriched in mercury occurs primarily in closer proximity to the freshwater source. The data also indicate a reverse gradient in reactive Mn contents, ranging from 29 to 81 μg/g, and increasing seaward. This implies that reactive Mn is mobilized from fine-grained reducing mangrove forest sediments in the upper estuary, and deposited downstream in sandier, oxygen-rich nearshore sediments. These results suggest that mangrove-surrounded estuaries may act as barriers to mercury transport to coastal waters, but as a source of manganese. The present findings also imply that reactive Mn may be used as an indication of Hg depositional patterns in other similar coastal sedimentary settings.

Relationships between Concentrations of Phytoplankton Chlorophyll a and Total Nitrogen in Ten U.S. Estuaries

EPA Science Inventory

This presentation focuses on the summertime response of phytoplankton chlorophyll to nitrogen concentrations in the upper water columns of ten U.S. estuaries. Using publicly available data from monitoring programs, regression relationships have been developed between summer surfa...

The Recent Microrelief Features of the Yangtze Estuary

NASA Astrophysics Data System (ADS)

Wu, S. H.

2016-02-01

Based on the bedforms date were made in the Yangtze estuary, China, during January 2010 and July 2015 with the acoustic multi-beam bathymetric and shallow sediment profiler and surface sediment samples collected recently, the microrelief features of the Yangtze Estuary under the human interference recently is studied. Results show that in addition to four types of common microrelief (smooth bedfloors , sandwaves, hollow and gully), but also there are two types of microrelief under the human interference (sand and dredging mark).Restricted by the nature of sediment, sand waves exist only in the local region of the South Channel, the North Channel the South Passage and the Hengsha passage whose main types of the surface sediment was fine sand. Under the combined effect of a series of large-scale engineering with watershed and estuary, the upper reach of North Channel, the Hengsha passage, the upper reach of south Channel and the upper reach of the South passage are subject to different degrees of erosion recently, so there are varying degrees of erosive microrelief (hollow and gully). Due to dredging engineering and artificial disordered mining, there are a huge range of dredging mark in the lower reach of South Channel, Yuanyuansha channel and North passage and there are a degree of sand in the main channel of south side of Ruifengsha.

Epifauna and thermal additions in the upper Patuxent River estuary

USGS Publications Warehouse

Cory, R.L.; Nauman, J.W.

1969-01-01

In the upper Patuxent Estuary environmental changes in temperature, salinity, and turbidity over a 5-year period are linked to changes in epifaunal production and species distribution. During 1967 a series of monthly panels showed dry weight production averaged 2.8 times greater in a steam electric station heated effluent than in the intake. A downriver shift in epifanual production in 1967 and changes in species abundance was noted and attributed to natural changes in salinity and turbidity and man-induced changes in temperature. ?? 1969 Estuarine Research Federation.

High intake rates of microplastics in a Western Atlantic predatory fish, and insights of a direct fishery effect.

PubMed

Ferreira, Guilherme V B; Barletta, Mário; Lima, André R A; Morley, Simon A; Justino, Anne K S; Costa, Monica F

2018-05-01

Microplastic contamination was investigated in the gut contents of an economically important estuarine top predator, Cynoscion acoupa, according to spatiotemporal and ontogenetic use of a tropical estuary. Microplastic contamination was found in more than half of the analysed fish. Ingested microplastics were classified by type, colour and length with most of the particles consisting of filaments (<5 mm). Longer filaments were more frequently ingested in the upper estuary and smaller filaments in the lower estuary, as a result of differences in hydrodynamic forces and proximity to the probable input sources. The river is likely an important source of filaments to the estuary and filaments ingested in the upper estuary showed little sign of weathering, when compared with those from the lower estuary, which are subject to intense weathering and consequent break-up of particles to smaller sizes. Most filaments, of all colours, accumulated in adults of C. acoupa, which are more susceptible to contamination through both direct ingestion and trophic transference as they shift their feeding mode to piscivory. Moreover, the highest ingestion of filaments in adults occurred in the lower estuary, during the late rainy season, likely associated with the intense fishing activities in this habitat, which results in a greater input of filaments from fishing gear, which are mainly blue in colour. Overall, 44% of the ingested filaments were blue, 20% purple, 13% black, 10% red and 12% white. The next most common colour, the purple filaments, are most likely blue filaments whose colour has weathered to purple. Red filaments were proportionally more ingested in the lower estuary, indicating a coastal/oceanic source. White and black filaments were more commonly ingested in the inner estuary, suggesting that they have a riverine origin and/or were actively ingested by juveniles and sub-adults, which inhabit the inner estuary and have zooplankton as an important food resource. Copyright © 2018 Elsevier Ltd. All rights reserved.

Dynamics of the turbidity maximum zone in a macrotidal estuary (the Gironde, France): Observations from field and MODIS satellite data

NASA Astrophysics Data System (ADS)

Doxaran, David; Froidefond, Jean-Marie; Castaing, Patrice; Babin, Marcel

2009-02-01

Over a 1-year period, field and satellite measurements of surface water turbidity were combined in order to study the dynamics of the turbidity maximum zone (TM) in a macrotidal estuary (the Gironde, France). Four fixed platforms equipped with turbidity sensors calibrated to give the suspended particulate matter (SPM) concentration provided continuous information in the upper estuary. Full resolution data recorded by the moderate resolution imaging spectroradiometer (MODIS) sensors onboard the Terra and Aqua satellite platforms provided information in the central and lower estuary twice a day (depending on cloud cover). Field data were used to validate a recently developed SPM quantification algorithm applied to the MODIS 'surface reflectance' product. The algorithm is based on a relationship between the SPM concentration and a reflectance ratio of MODIS bands 2 (near-infrared) and 1 (red). Based on 62 and 75 match-ups identified in 2005 with MODIS Terra and Aqua data, the relative uncertainty of the algorithm applied to these sensors was found to be 22 and 18%, respectively. Field measurements showed the tidal variations of turbidity in the upper estuary, while monthly-averaged MODIS satellite data complemented by field data allowed observing the monthly movements of the TM in the whole estuary. The trapping of fine sediments occurred in the upper estuary during the period of low river flow. This resulted in the formation of a highly concentrated TM during a 4-month period. With increasing river flow, the TM moved rapidly to the central estuary. A part of the TM detached, moved progressively in the lower estuary and was finally either massively exported to the ocean during peak floods or temporary trapped (settled) on intertidal mudflats. The massive export to the ocean was apparently the result of combined favorable environmental conditions: presence of fluid mud near the mouth, high river flow, high tides and limited wind speeds. The mean SPM concentration within surface waters of the whole estuary showed strong seasonal variations but remained almost unchanged on a 1-year-basis. These observations suggest that the masses of suspended sediments exported toward the ocean and supplied by the rivers were almost equivalent during the year investigated (2005). Results show the usefulness of information extracted from combined field and current ocean color satellite data in order to monitor the transport of suspended particles in coastal and estuarine waters.

Seasonal distribution and interactions between plankton and microplastics in a tropical estuary

NASA Astrophysics Data System (ADS)

Lima, A. R. A.; Barletta, M.; Costa, M. F.

2015-11-01

The seasonal migration of a salt wedge and rainfall were the major factors influencing the spatiotemporal distribution of ichthyoplankton and microplastics along the main channel of the Goiana Estuary, NE Brazil. The most abundant taxa were the clupeids Rhinosardinia bahiensis and Harengula clupeola, followed by the achirid Trinectes maculatus (78.7% of the catch). Estuarine and mangrove larvae (e.g. Anchovia clupeoides, Gobionellus oceanicus), as well as microplastics were ubiquitous. During drier months, the salt wedge reaches the upper estuary and marine larvae (e.g. Cynoscion acoupa) migrated upstream until the zones of coastal waters influence. However, the meeting of waterfronts in the middle estuary forms a barrier that retains the microplastics in the upper and lower estuary most part of the year. During the late dry season, a bloom of zooplankton was followed by a bloom of fish larvae (12.74 ind. 100 m-3) and fish eggs (14.65 ind. 100 m-3) at the lower estuary. During the late rainy season, the high freshwater inflow flushed microplastics, together with the biota, seaward. During this season, a microplastic maximum (14 items 100 m-3) was observed, followed by fish larvae maximum (14.23 ind. 100 m-3) in the lower estuary. In contrast to fish larvae, microplastics presented positive correlation with high rainfall rates, being more strictly associated to flushing out/into the estuary than to seasonal variation in environmental variables. Microplastics represented half of fish larvae density. Comparable densities in the water column increase the chances of interaction between microplastics and fish larvae, including the ingestion of smaller fragments, whose shape and colour are similar to zooplankton prey.

Predicting the effect of seine rope layout pattern and haul-in procedure on the effectiveness of demersal seine fishing: A Computer simulation-based approach.

PubMed

Madsen, Nina A H; Aarsæther, Karl G; Herrmann, Bent

2017-01-01

Demersal Seining is an active fishing method applying two long seine ropes and a seine net. Demersal seining relies on fish responding to the seine rope as it moves during the fishing process. The seine ropes and net are deployed in a specific pattern encircling an area on the seabed. In some variants of demersal seining the haul-in procedure includes a towing phase where the fishing vessel moves forward before starting to winch in the seine ropes. The initial seine rope encircled area, the gradual change in it during the haul-in process and the fish's reaction to the moving seine ropes play an important role in the catch performance of demersal seine fishing. The current study investigates this subject by applying computer simulation models for demersal seine fishing. The demersal seine fishing is dynamic in nature and therefore a dynamic model, SeineSolver is applied for simulating the physical behaviour of the seine ropes during the fishing process. Information about the seine rope behaviour is used as input to another simulation tool, SeineFish that predicts the catch performance of the demersal seine fishing process. SeineFish implements a simple model for how fish at the seabed reacts to an approaching seine rope. Here, the SeineSolver and SeineFish tools are applied to investigate catching performance for a Norwegian demersal seine fishery targeting cod (Gadus morhua) in the coastal zone. The effect of seine rope layout pattern and the duration of the towing phase are investigated. Among the four different layout patterns investigated, the square layout pattern was predicted to perform best; catching 69%-86% more fish than would be obtained with the rectangular layout pattern. Inclusion of a towing phase in the fishing process was found to increase the catch performance for all layout patterns. For the square layout pattern, inclusion of a towing phase of 15 or 35 minutes increased the catch performance by respectively 37% and 48% compared to fishing without a towing phase. These results highlights the importance of the selected seine rope layout pattern and the duration of the towing phase when fishermen try to maximize the catch performance of their fishery. To our knowledge this is the first time the combination of models for the physical behaviour of seine ropes and for fish behaviour in response to seine rope movements have been applied to predict catch performance for demersal seining.

Predicting the effect of seine rope layout pattern and haul-in procedure on the effectiveness of demersal seine fishing: A Computer simulation-based approach

PubMed Central

Madsen, Nina A. H.; Aarsæther, Karl G.; Herrmann, Bent

2017-01-01

Demersal Seining is an active fishing method applying two long seine ropes and a seine net. Demersal seining relies on fish responding to the seine rope as it moves during the fishing process. The seine ropes and net are deployed in a specific pattern encircling an area on the seabed. In some variants of demersal seining the haul-in procedure includes a towing phase where the fishing vessel moves forward before starting to winch in the seine ropes. The initial seine rope encircled area, the gradual change in it during the haul-in process and the fish's reaction to the moving seine ropes play an important role in the catch performance of demersal seine fishing. The current study investigates this subject by applying computer simulation models for demersal seine fishing. The demersal seine fishing is dynamic in nature and therefore a dynamic model, SeineSolver is applied for simulating the physical behaviour of the seine ropes during the fishing process. Information about the seine rope behaviour is used as input to another simulation tool, SeineFish that predicts the catch performance of the demersal seine fishing process. SeineFish implements a simple model for how fish at the seabed reacts to an approaching seine rope. Here, the SeineSolver and SeineFish tools are applied to investigate catching performance for a Norwegian demersal seine fishery targeting cod (Gadus morhua) in the coastal zone. The effect of seine rope layout pattern and the duration of the towing phase are investigated. Among the four different layout patterns investigated, the square layout pattern was predicted to perform best; catching 69%-86% more fish than would be obtained with the rectangular layout pattern. Inclusion of a towing phase in the fishing process was found to increase the catch performance for all layout patterns. For the square layout pattern, inclusion of a towing phase of 15 or 35 minutes increased the catch performance by respectively 37% and 48% compared to fishing without a towing phase. These results highlights the importance of the selected seine rope layout pattern and the duration of the towing phase when fishermen try to maximize the catch performance of their fishery. To our knowledge this is the first time the combination of models for the physical behaviour of seine ropes and for fish behaviour in response to seine rope movements have been applied to predict catch performance for demersal seining. PMID:28771583

Spatial and temporal patterns in the hyperbenthic community structure in a warm temperate southern African permanently open estuary

NASA Astrophysics Data System (ADS)

Heyns, Elodie; Froneman, William

2010-06-01

The spatial and temporal patterns in the hyperbenthic community structure (>500 μm) in the warm temperate, permanently open Kariega Estuary situated along the south-eastern coastline of South Africa was investigated monthly over a period of twelve months. Data were collected using a modified hyperbenthic sledge at six stations along the length of the estuary. Physico-chemical data indicate the presence of a constant reverse salinity gradient, with highest salinities measured in the upper reaches and lowest at the mouth of the estuary. Strong seasonal patterns in temperature, dissolved oxygen and total chlorophyll- a (chl- a) concentration were evident. Total average hyperbenthic densities ranged between 0.4 and 166 ind.m -3 in the lower net and between 0.2 and 225 ind.m -3 in the upper net. Hyperbenthic biomass values ranged between 0.02 and 11.9 mg.dry weight.m -3 in the lower net and between 0.02 and 17.4 mg.dry weight.m -3 in the upper net. Both the lower and upper nets were numerically dominated by decapods (mainly brachyuran crab zoea) with the exception of June and July 2008 when mysids (mainly Mesopodopsis wooldridgei) dominated, comprising up to 72.4 ± 58.14% of the total abundance in the lower net. A redundancy analysis (RDA) indicated that 99.2% of the variance in the hyperbenthic community structure could be explained by the first two canonical axes. Axis one, which accounted for 96.8% of the total variation detected in the ordination plot was highly correlated with sedimentary organic content and to a lesser extent the chl- a concentration within the Kariega Estuary. The correlations with the second canonical axis (2.4%) were less obvious, however, salinity and seston concentration were weakly correlated with this axis.

The physical and geochemical interaction between a tidally-dominated estuary system (Wassaw Sound, GA) and a river-dominated estuary (Savannah River, GA) through salinity and inorganic carbon

Treesearch

Mike Scaboo; Christopher Hintz

2016-01-01

The Wilmington, Bull, and Savannah Rivers are interconnected waterways that flow through adjacent Savannah and Wassaw Sound Estuaries. These systems are linked by the upper reaches of the Wilmington River maintained as part of the Intracoastal Waterway. Significant changes to the Savannah River began in December 2014 with the initiation of the Savannah Harbor Expansion...

Fish communities and the nursery role of the shallow inshore waters of a tropical bay in the gulf of Carpentaria, Australia

NASA Astrophysics Data System (ADS)

Blaber, S. J. M.; Brewer, D. T.; Salini, J. P.

The species composition of the fishes of the inshore zone between a tropical estuary and offshore trawling grounds were studied. The objectives were to investigate the affinities of the fishes with those of adjacent areas, to examine the influence of abiotic factors on species composition, and to assess the role and importance of the zone as a nursery area. The shallow (<5 m) inshore waters south of the Embley estuary were sampled in two wet, two dry and two pre-wet seasons between 1989 and 1993. A total of 7934 fish of 118 species were caught with gill nets (5741 individuals of 95 species) and beach seines (2193 individuals of 45 species). Forty-two of the species caught have not been reported in the adjacent offshore prawn or fish trawling grounds, 32 species have not been found in the nearby Embley estuary, and 15 species were caught only in the inshore zone. The dominant species caught by gill netting in the inshore zone were Scomberoides commersonianus (5.47 g m -1 h -1), Chanos chanos (3.67 g m -1 h -1) and Eleutheronema tetradactylum (3.57 g m -1 h -1). Overall, fish catch rates and biomasses were less than in the adjacent estuary and offshore waters, but greater than in tropical sea-grass localities. The number of species in the inshore zone (118) is less than in the Embley estuary (197), the clear inshore waters of Groote Eylandt in the western Gulf of Carpentaria (156) and in the offshore waters (237), but greater than in the Norman estuary (100). These differences are probably due to habitat diversity. Water turbidity, tidal range, wind and day versus night were the only abiotic factors that correlated with the relative abundances of some species. The inshore zone acts as a nursery for many species and is the first nursery ground for at least 11 species whose adults live mainly offshore. The overall juvenile component of the inshore fauna consists of fishes apparently restricted to the inshore habitat, larger juveniles that have emigrated from the estuary, and fish that occur in all three habitats. The inshore zone is not primarily or solely a transition zone between estuary and offshore. It is a habitat with characteristic juvenile and adult fish communities, but it supports some fish that move between offshore and estuarine habitats. It is also an important spawning area for some species as well as a foraging zone for a number of piscivores.

Comparison of the structure of lower and upper estuary food webs for Yaquina Bay (OR)

EPA Science Inventory

Food web models can be used to estimate effects of water quality, habitat distribution or species loss on productivity, carbon flow and ecosystem service production in Pacific NW estuaries. Here we present a comparison of floral and faunal data used to parameterize food web mode...

An integrated model for the fate and bioaccumulation of PCBs in the Hudson River estuary

DOE Office of Scientific and Technical Information (OSTI.GOV)

Farley, K.J.; Thomann, R.V.

1995-12-31

An integrated mass transport model with a five component food chain calculation was developed for predicting PCB accumulation in sediments, lower trophic species, and striped bass. The model was originally applied to PCB homologues and calibrated using field data through 1987. Results of this work indicated that, under a no-action alternative, 50% of the striped bass would be below the FDA limit of 2 {micro}g of PCB/g of fish (wet weight) by 1992 and 95% of the striped bass would be below the FDA limit by 2004. An initial post-audit evaluation of the model showed that predicted PCB concentrations inmore » striped bass compared well to field measurements. Some deviation in predicted and observed concentrations however were noted in the upper portion of the estuary and are believed to be related to a transient PCB load from the upper Hudson. Further evaluations are presently being performed to addressed: (1) how have Hudson River sediments and striped bass responded to decreasing PCB loads; (2) what are the relative contributions of PCB loads from the upper Hudson, from contaminated estuarine sediments, and from wastewater discharges into the lower estuary on present PCB levels in fish; and (3) what role does congener structure play in determining the fate and bioaccumulation of PCBs in the Hudson River estuary.« less

Utilization of organic matter by invertebrates along an estuarine gradient in an intermittently open estuary

NASA Astrophysics Data System (ADS)

Lautenschlager, Agnes D.; Matthews, Ty G.; Quinn, Gerry P.

2014-08-01

In intermittently open estuaries, the sources of organic matter sustaining benthic invertebrates are likely to vary seasonally, particularly between periods of connection and disconnection with the ocean and higher and lower freshwater flows. This study investigated the contribution of allochthonous and autochthonous primary production to the diet of representative invertebrate species using stable isotope analysis (SIA) during the austral summer and winter (2008, 2009) in an intermittently open estuary on the south-eastern coast of Australia. As the study was conducted towards the end of a prolonged period of drought, a reduced influence of freshwater/terrestrial organic matter was expected. Sampling was conducted along an estuarine gradient, including upper, middle and lower reaches and showed that the majority of assimilated organic matter was derived from autochthonous estuarine food sources. Additionally, there was an input of allochthonous organic matter, which varied along the length of the estuary, indicated by distinct longitudinal trends in carbon and nitrogen stable isotope signatures along the estuarine gradient. Marine seaweed contributed to invertebrate diets in the lower reaches of the estuary, while freshwater/terrestrial organic matter had increased influence in the upper reaches. Suspension-feeding invertebrates derived large parts of their diet from freshwater/terrestrial material, despite flows being greatly reduced in comparison with non-drought years.

Circulation in the Chesapeake Bay entrance region: Estuary-shelf interaction

NASA Technical Reports Server (NTRS)

Boicourt, W. C.

1981-01-01

Current meters and temperature-salinity recorders confirm the assumption that the upper layers of the continental shelf waters off Chesapeake Bay can be banded in summer, such that the coastal boundary layer (consisting of the Bay outflow) and the outer shelf flow southward while the inner shelf flows to the north, driven by the prevailing southerly winds. These measurements show that the estuary itself may also be banded in its lower reaches such that the inflow is confined primarily to the deep channel, while the upper layer outflow is split into two flow maxima on either side of this channel.

From headwaters to coast: Influence of human activities on water quality of the Potomac River Estuary

USGS Publications Warehouse

Bricker, Suzanne B.; Rice, Karen C.; Bricker, Owen P.

2014-01-01

The natural aging process of Chesapeake Bay and its tributary estuaries has been accelerated by human activities around the shoreline and within the watershed, increasing sediment and nutrient loads delivered to the bay. Riverine nutrients cause algal growth in the bay leading to reductions in light penetration with consequent declines in sea grass growth, smothering of bottom-dwelling organisms, and decreases in bottom-water dissolved oxygen as algal blooms decay. Historically, bay waters were filtered by oysters, but declines in oyster populations from overfishing and disease have led to higher concentrations of fine-sediment particles and phytoplankton in the water column. Assessments of water and biological resource quality in Chesapeake Bay and tributaries, such as the Potomac River, show a continual degraded state. In this paper, we pay tribute to Owen Bricker’s comprehensive, holistic scientific perspective using an approach that examines the connection between watershed and estuary. We evaluated nitrogen inputs from Potomac River headwaters, nutrient-related conditions within the estuary, and considered the use of shellfish aquaculture as an in-the-water nutrient management measure. Data from headwaters, nontidal, and estuarine portions of the Potomac River watershed and estuary were analyzed to examine the contribution from different parts of the watershed to total nitrogen loads to the estuary. An eutrophication model was applied to these data to evaluate eutrophication status and changes since the early 1990s and for comparison to regional and national conditions. A farm-scale aquaculture model was applied and results scaled to the estuary to determine the potential for shellfish (oyster) aquaculture to mediate eutrophication impacts. Results showed that (1) the contribution to nitrogen loads from headwater streams is small (about 2 %) of total inputs to the Potomac River Estuary; (2) eutrophic conditions in the Potomac River Estuary have improved in the upper estuary since the early 1990s, but have worsened in the lower estuary. The overall system-wide eutrophication impact is high, despite a decrease in nitrogen loads from the upper basin and declining surface water nitrate nitrogen concentrations over that period; (3) eutrophic conditions in the Potomac River Estuary are representative of Chesapeake Bay region and other US estuaries; moderate to high levels of nutrient-related degradation occur in about 65 % of US estuaries, particularly river-dominated low-flow systems such as the Potomac River Estuary; and (4) shellfish (oyster) aquaculture could remove eutrophication impacts directly from the estuary through harvest but should be considered a complement—not a substitute—for land-based measures. The total nitrogen load could be removed if 40 % of the Potomac River Estuary bottom was in shellfish cultivation; a combination of aquaculture and restoration of oyster reefs may provide larger benefits.

Relationships among benthic green macroalgae, infaunal invertebrates, and dissolved sulfides in sediment pore waters, Yaquina Estuary, Oregon, USA

EPA Science Inventory

Relatively high abundances of benthic green macroalgae (Ulva spp.) have been measured in Yaquina Estuary on the central coast of the State of Oregon, USA. Band transects (30 meters in width) from the lower to the upper intertidal zone were established at two sites (Idaho Point a...

Comparison of environmental forcings affecting suspended sediments variability in two macrotidal, highly-turbid estuaries

NASA Astrophysics Data System (ADS)

Jalón-Rojas, Isabel; Schmidt, Sabine; Sottolichio, Aldo

2017-11-01

The relative contribution of environmental forcing frequencies on turbidity variability is, for the first time, quantified at seasonal and multiannual time scales in tidal estuarine systems. With a decade of high-frequency, multi-site turbidity monitoring, the two nearby, macrotidal and highly-turbid Gironde and Loire estuaries (west France) are excellent natural laboratories for this purpose. Singular Spectrum Analyses, combined with Lomb-Scargle periodograms and Wavelet Transforms, were applied to the continuous multiannual turbidity time series. Frequencies of the main environmental factors affecting turbidity were identified: hydrological regime (high versus low river discharges), river flow variability, tidal range, tidal cycles, and turbulence. Their relative influences show similar patterns in both estuaries and depend on the estuarine region (lower or upper estuary) and the time scale (multiannual or seasonal). On the multiannual time scale, the relative contribution of tidal frequencies (tidal cycles and range) to turbidity variability decreases up-estuary from 68% to 47%, while the influence of river flow frequencies increases from 3% to 42%. On the seasonal time scale, the relative influence of forcings frequencies remains almost constant in the lower estuary, dominated by tidal frequencies (60% and 30% for tidal cycles and tidal range, respectively); in the upper reaches, it is variable depending on hydrological regime, even if tidal frequencies are responsible for up 50% of turbidity variance. These quantifications show the potential of combined spectral analyses to compare the behavior of suspended sediment in tidal estuaries throughout the world and to evaluate long-term changes in environmental forcings, especially in a context of global change. The relevance of this approach to compare nearby and overseas systems and to support management strategies is discussed (e.g., selection of effective operation frequencies/regions, prediction of the most affected regions by the implementation of operational management plans).

Spatial and temporal structure of fish assemblages in an ''inverse estuary'', the Sine Saloum system (Senegal)

NASA Astrophysics Data System (ADS)

Simier, M.; Blanc, L.; Aliaume, C.; Diouf, P. S.; Albaret, J. J.

2004-01-01

As a consequence of the Sahelian drought, the Sine Saloum, a large estuarine system located in Senegal (West Africa), has become an "inverse estuary" since the late sixties, i.e. salinity increases upstream and reaches 100 in some places. To study the fish assemblages of such a modified system, a survey was conducted in 1992, collecting fish every two months with a purse seine at eight sites spread over the three main branches of the estuary. A total of 73 species belonging to 35 families were identified. Eight species comprised 97% of the total numbers of fish. The predominant species was a small clupeid, Sardinella maderensis, representing more than half of the total biomass and nearly 70% of the total number of fish. The spatio-temporal structure of the fish assemblages was studied using the STATIS-CoA method, which combines the multitable approach with the correspondence analysis method. Whatever the season, a strong spatial organization of fish assemblages was observed, mainly related to depth and salinity. Three types of assemblages were identified. In shallow water areas, fish assemblages were dominated by Mugilidae, Gerreidae and Cichlidae and were stable with time. In open water areas, large fluctuations in the species composition were observed, due to the occasional presence of large schools of pelagic species: in the southern area, where salinity and water transparency were the lowest, the main species were Ilisha africana, Brachydeuterus auritus and Chloroscombrus chrysurus, associated with a few Sciaenidae and Tetraodontidae, while the poorest areas were characterized by only two dominant species, S. maderensis and Scomberomorus tritor.

Population ecology of the blue crab Callinectes danae (Crustacea: Portunidae) in a Brazilian tropical estuary.

PubMed

Araújo, Marina S L C; Barreto, Aline V; Negromonte, Aurinete O; Schwamborn, Ralf

2012-03-01

This paper aims at describing the population ecology of the swimming crab Callinectes danae Smith, 1869 in one of the most productive estuaries of Brazil, the Santa Cruz Channel. These crabs were monthly collected from January to December/2009 at four stations along the channel, two in the upper and two in the lower estuary. A total of 2373 specimens of C. danae were collected during the study. Males had a larger average carapace width than non-ovigerous females (60.0 ± 15.6 mm and 52.9 ± 12.4 mm, respectively), an adaptation that gives greater protection for females during the copulation. Overall sex ratio did not differ significantly from 1:1. However, evaluating sex-ratio by sampling area, males and juveniles of both sexes occurred preferentially in the upper estuary (p < 0.05), while adult females, including ovigerous, inhabited the lower estuary, an area of major marine influence (p < 0.05). While juveniles look for estuarine waters due to the benefit from the shelter and abundance of food, ovigerous females migrate to areas of greater depth and higher salinity in order to provide a more favorable environment for embryonic and larval development and to enhance larval dispersal. Recruitment of juveniles was continuous along the year, but intensified from March to June and, with less intensity, from October to December.

A numerical study of vegetation impact on reducing storm surge by wetlands in a semi-enclosed estuary

USGS Publications Warehouse

Kelin, Hu; Qin, Chen; Wang, Hongqing

2014-01-01

Coastal wetlands play a unique role in extreme hurricane events. The impact of wetlands on storm surge depends on multiple factors including vegetation, landscape, and storm characteristics. The Delft3D model, in which vegetation effects on flow and turbulence are explicitly incorporated, was applied to the semi-enclosed Breton Sound (BS) estuary in coastal Louisiana to investigate the wetland impact. Guided by extensive field observations, a series of numerical experiments were conducted based on variations of actual vegetation properties and storm parameters from Hurricane Isaac in 2012. Both the vegetation-induced maximum surge reduction (MSR) and maximum surge reduction rate (MSRR) increased with stem height and stem density, and were more sensitive to stem height. The MSR and MSRR decreased significantly with increasing wind intensity. The MSRR was the highest with a fast-moving weak storm. It was also found that the MSRR varied proportionally to the expression involving the maximum bulk velocity and surge over the area of interest, and was more dependent on the maximum bulk surge. Both MSR and MSRR appeared to increase when the area of interest decreased from the whole BS estuary to the upper estuary. Within the range of the numerical experiments, the maximum simulated MSR and MSRR over the upper estuary were 0.7 m and 37%, respectively.

Secular bathymetric variations of the North Channel in the Changjiang (Yangtze) Estuary, China, 1880-2013: Causes and effects

NASA Astrophysics Data System (ADS)

Mei, Xuefei; Dai, Zhijun; Wei, Wen; Li, Weihua; Wang, Jie; Sheng, Hao

2018-02-01

As the interface between the fluvial upland system and the open coast, global estuaries are facing serious challenges owing to various anthropogenic activities, especially to the Changjiang Estuary. Since the establishment of the Three Gorges Dam (TGD), currently the world's largest hydraulic structure, and certain other local hydraulic engineering structures, the Changjiang Estuary has experienced severe bathymetric variations. It is urgent to analyze the estuarine morphological response to the basin-wide disturbance to enable a better management of estuarine environments. North Channel (NC), the largest anabranched estuary in the Changjiang Estuary, is the focus of this study. Based on the analysis of bathymetric data between 1880 and 2013 and related hydrological data, we developed the first study on the centennial bathymetric variations of the NC. It is found that the bathymetric changes of NC include two main modes, with the first mode representing 64% of the NC variability, which indicates observable deposition in the mouth bar and its outer side area (lower reach); the second mode representing 11% of the NC variability, which further demonstrates channel deepening along the inner side of the mouth bar (upper reach) during 1970-2013. Further, recent erosion observed along the inner side of the mouth bar is caused by riverine sediment decrease, especially in relation to TGD induced sediment trapping since 2003, while the deposition along the lower reach since 2003 can be explained by the landward sediment transport because of flood-tide force strengthen under the joint action of TGD induced seasonal flood discharge decrease and land reclamation induced lower reach narrowing. Generally, the upper and lower NC reach are respectively dominated by fluvial and tidal discharge, however, episodic extreme floods can completely alter the channel morphology by smoothing the entire channel. The results presented herein for the NC enrich our understanding of bathymetric variations of the Changjiang Estuary in response to human activities, which can be well applied to other estuaries subject to similar interferences.

Estuarine retention of larvae of the crab Rhithropanopeus harrisii

NASA Astrophysics Data System (ADS)

Cronin, Thomas W.

1982-08-01

Larvae of estuarine organisms continually face possible export from the parent estuary. Retention of larvae of the estuarine crab Rhithropanopeus harrisii was investigated in the upper Newport River estuary, North Carolina. All of the developmental stages occurred in the same area of the estuary with similar horizontal distributions, and the concentrations of intermediate and late stages were not greatly reduced from those of the first larval stage. This was strong evidence for the continuous retention of larvae in the upper estuary. To determine mechanisms by which retention might be effected, field studies of the vertical distributions and migrations of these larvae were made. The four zoeal stages had similar but complex vertical migration patterns, which varied from study to study. These migrations centered on the depth of no net flow, reducing longitudinal transport during development. Cross-spectral analysis of the larval migrations and the environmental cycles of light, salinity and current speed revealed that each of these external cycles affected larval depth. Megalopae of R. harrisii also migrated vertically, but they were present in much lower concentrations than the zoeal stages, an indication of a change to benthic existence in this final larval form.

Managed nutrient reduction impacts on nutrient concentrations, water clarity, primary production, and hypoxia in a north temperate estuary

NASA Astrophysics Data System (ADS)

Oviatt, Candace; Smith, Leslie; Krumholz, Jason; Coupland, Catherine; Stoffel, Heather; Keller, Aimee; McManus, M. Conor; Reed, Laura

2017-12-01

Except for the Providence River and side embayments like Greenwich Bay, Narragansett Bay can no longer be considered eutrophic. In summer 2012 managed nitrogen treatment in Narragansett Bay achieved a goal of reducing effluent dissolved inorganic nitrogen inputs by over 50%. Narragansett Bay represents a small northeast US estuary that had been heavily loaded with sewage effluent nutrients since the late 1800s. The input reduction was reflected in standing stock nutrients resulting in a statistically significant 60% reduction in concentration. In the Providence River estuary, total nitrogen decreased from 100 μm to about 40 μm, for example. We tested four environmental changes that might be associated with the nitrogen reduction. System apparent production was significantly decreased by 31% and 45% in the upper and mid Bay. Nutrient reductions resulted in statistically improved water clarity in the mid and upper Bay and in a 34% reduction in summer hypoxia. Nitrogen reduction also reduced the winter spring diatom bloom; winter chlorophyll levels after nutrient reduction have been significantly lower than before the reduction. The impact on the Bay will continue to evolve over the next few years and be a natural experiment for other temperate estuaries that will be experiencing nitrogen reduction. To provide perspective we review factors effecting hypoxia in other estuaries with managed nutrient reduction and conclude that, as in Narragansett Bay, physical factors can be as important as nutrients. On a positive note managed nutrient reduction has mitigated further deterioration in most estuaries.

Diet of juvenile and adult American Shad in the Columbia River

USGS Publications Warehouse

Sauter, Sally T.; Blubaugh, J; Parsley, Michael J.

2011-01-01

The diet of juvenile and adult American shad Alosa sapidissima captured from various locations in the Columbia River was investigated during 2007 and 2008. Collection efforts in 2007 were restricted to fish collected from existing adult and juvenile fish collection facilities located at Bonneville Dam and to adult shad captured by angling downstream from Bonneville Dam. In 2008, we used gillnets, electrofishing, beach seining, or cast nets to collect juvenile and adult shad from the saline estuary near Astoria (approximately river km 24) to just upstream from McNary Dam (approximately river km 472). We examined the stomach contents of 436 American shad captured in 2007 and 1,272 captured in 2008. Fish caught within the river were much more likely to contain food items than fish removed from fish collection facilities.

The diet of age-0 American shad varied spatially and temporally, but was comprised primarily of crustaceans and insects. Prey diversity of age-0 American shad, as assessed by the Shannon Diversity Index, increased with decreasing distance to the estuary. Pre- and partial-spawn American shad primarily consumed Corophium spp. throughout the Columbia River; however, post-spawn adults primarily consumed gastropods upstream of McNary Dam

Tidal fluctuations influence E. coli concentrations in urban estuaries.

PubMed

Jovanovic, Dusan; Coleman, Rhys; Deletic, Ana; McCarthy, David T

2017-06-15

This study investigated the influence of water level and velocity on Escherichia coli levels over multiple tidal cycles in an urban microtidal estuary in Melbourne, Australia. Over 3,500 E. coli samples and high resolution water level and velocity measurements from two locations within the estuary were used for the analysis. E. coli negatively correlated with water level in the upper estuary which was proposed to be linked to increased resuspension of estuarine sediments during low tide. No relationship was found in the lower estuary, likely due to wet weather inputs dwarfing subtler tidal-related processes. Removal of wet weather data enabled significant relationships to emerge in the lower estuary: 1) positive with water level (when a 9-h shift applied corresponding to the phase shift between water levels and velocities) and; 2) positive with velocity (no shift applied). This supports a link between increased E. coli levels and tidal-related resuspension. Copyright © 2017 Elsevier Ltd. All rights reserved.

Modelling algae growth and dissolved oxygen in the Seine River downstream the Paris urban area: contribution of high frequency measurements

NASA Astrophysics Data System (ADS)

Vilmin, Lauriane; Escoffier, Nicolas; Groleau, Alexis; Poulin, Michel; Flipo, Nicolas

2014-05-01

Dissolved oxygen is a key variable in the hydro-ecological functioning of river systems. The accurate representation of the different biogeochemical processes affecting algal blooms and dissolved oxygen in the water column in hydro-ecological models is crucial for the use of these models as reliable management tools. This study focuses on the water quality of the Seine River along a 225 km stretch, from Paris to the Seine estuary. The study area is highly urbanized and located downstream France's largest agricultural area, and therefore receives large amounts of nutrients. During the last decades, nutrient inputs have been significantly reduced, especially with the implementation of new sewage water treatment technologies. Even though the frequency and the intensity of observed algal blooms have decreased, blooms were observed in 2011 and 2012. These blooms are generally followed by a period of high organic matter accumulation, leading to high mineralization fluxes and potential oxygen depletion. The hydrodynamics and the water quality of the Seine River are simulated for the 2011-2012 period with the distributed process-based hydro-ecological model ProSe (Even et al., 1998). The simulated chlorophyll a and dissolved oxygen concentrations are compared to high frequency measurements at the Bougival monitoring station (50 km downstream from Paris), which is part of the CarboSeine monitoring network. The high frequency continuous dataset allows calibrating of primary producers' physiological parameters. New growth parameters are defined for the diatom community. The blooms occur at the end of the winter period (march 2011 and march 2012) and the optimal temperature for diatom growth is calibrated at 10°C, based on an analysis of the physiological response of the diatom community. One of the main outcomes of the modelling exercise is that the precise identification of the constituting communities of algal blooms must be achieved prior to the modelling itself. With the new growth parameters and by considering additional communities, as dinoflagellates, in the model, chlorophyll a peak values (over 60 µg/L in 2011 and over 30 in 2012) are accurately simulated. Moreover, the production rate of the communities constituting an algal bloom can be estimated by interpreting the high frequency diel dissolved oxygen curves (Escoffier et al., 2013). The modelled production rate during the 2011 bloom is of the same order of magnitude as the one estimated with this method (0.5 to 2 g/m3/day of oxygen), which validates the representation of photosynthesis in the model. Therefore the simulated oxygen response is also improved. References: Even S., Poulin M., Garnier J., Billen G., Servais P., Chesterikoff A., Coste M., 1998. River ecosystem modelling: Application of the ProSe model to the Seine river (France). Hydrobiologia 373, 27-37. Escoffier N., Bensoussan N., Métivier F., Rocher V., Bernard C., Arnaud D., Vilmin L., Poulin M., Flipo N., Groleau A., 2013. Intergrating large river trophic functioning from real time sensors network measurements. American Society of Limnology and Oceanography Congress. New Orleans, February 2013.

Benthic macrofaunal dynamics and environmental stress across a salt wedge Mediterranean estuary.

PubMed

Nebra, Alfonso; Alcaraz, Carles; Caiola, Nuno; Muñoz-Camarillo, Gloria; Ibáñez, Carles

2016-06-01

The spatial distribution of benthic macroinvertebrate community in relation to environmental factors was studied along the Ebro Estuary (NE Iberian Peninsula), a salt wedge Mediterranean estuary. Both ordination methods and generalized additive models were performed to identify the different benthic assemblages and their relationship to abiotic factors. Our results showed a strong relationship between macrofaunal assemblages and the predominant environmental gradients (e.g. salinity); thus revealing spatial differences in their structure and composition. Two different stretches were identified, namely the upper (UE) and the lower Ebro Estuary (LE). UE showed riverine characteristics and hence was colonized by a freshwater community; whereas LE was influenced by marine intrusion and sustained a complex marine-origin community. However, within each stretch, water and sediment characteristics played an important role in explaining species composition differences among sampling stations. Moreover, outcomes suggested a total species replacement pattern, instead of the nestedness pattern usually associated with well-mixed temperate estuaries. The sharp species turnover together with the estuarine stratification point out that the Ebro Estuary is working, in terms of ecological boundaries, under an ecotone model. Finally, despite obvious differences with well mixed estuaries (i.e. lack of tidal influence, stratification and species turnover), the Ebro Estuary shares important ecological attributes with well-mixed temperate estuaries. Copyright © 2016 Elsevier Ltd. All rights reserved.

External nutrient sources, internal nutrient pools, and phytoplankton production in Chesapeake Bay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Magnien, R.E.; Summers, R.M.; Sellner, K.G.

1992-12-01

External nutrient loadings, internal nutrient pools, and phytoplankton production were examined for three major subsystems of the Chesapeake Bay Estuary-the upper Mainstem, the Patuxent Estuary, and the Potomac Estuary-during 1985-1989. The atomic nitrogen to phosphorus ratios (TN:TP) of total loads were 51, 29 and 35, respectively. Most of these loads entered at the head of the estuaries from riverine sources and major wastewater treatment plants. Seven-16% of the nitrogen load entered the head of each estuary as particulate matter in contrast to 48-69% for phosphorus. The difference seems to favor a greater loss of phosphorus than nitrogen through sedimentation andmore » burial. A major storm event in the Potomac watershed greatly increased the particulate fraction of nitrogen and phosphorus and lowered the TN:TP in the river-borne loads and accounted for 11% of the nitrogen and 31% of the phosphorus delivered to the estuary by the Potomac River during the entire 60- month period examined here. Within the Mainstem estuary, salinity dilution plots revealed strong net sources of ammonium and phosphate in the oligohaline to upper mesohaline region. indicating considerable internal recycling of nutrients to surface waters. A net sink of nitrate was indicated during summer. Phytoplankton biomass in the mesohaline Mainstem reached a peak in spring and was relatively constant throughout the other seasons. In the Patuxent and Potomac, the TN:TP ratios of external loads are 2-4 times higher than those observed over the previous two decades. These changes are attributed to point-source phosphorus controls and the likelihood that nitrogen-rich nonpoint source inputs, including contributions from the atmosphere, have increased. These higher N:P ratios now suggest a greater overall potential for phosphorus-limitation rather than nitrogen-limitation of phytoplankton in the areas studied. 66 refs., 6 figs., 7 tabs.« less

Impact of the river Liffey discharge on nutrient and chlorophyll concentrations in the Liffey estuary and Dublin Bay (Irish Sea)

NASA Astrophysics Data System (ADS)

O'Higgins, T. G.; Wilson, J. G.

2005-08-01

Temperature, salinity, nutrients (total oxidised nitrogen (TON), ammonium (NH 4) and orthophosphate (PO 4)) and chlorophyll a were monitored in the Liffey estuary and Dublin Bay from June 2000 to June 2003. Four groups of sites were defined comprising the upper estuary (Gp. I), the outer estuary (Gp. III) with a small set (Gp. II) of sites between Groups I and III heavily influenced by the sewage treatment works outflow, and the Bay proper (Gp. IV). Riverine inputs of TON and PO 4 were calculated at an average of 826 t N y -1 and 31 t P y -1, respectively, and were largely controlled by flow rate. The sewage treatment works were identified as a major source of PO 4 and NH 4 to the system. Mixing in the upper estuary of nutrient limited saline waters with hypernutrified river water regularly (i.e. annually) produced relatively high concentrations of chlorophyll a (>10 mg chl a m -3), and also sporadic blooms with extremely high chlorophyll a values (max. 121.6 mg chl a m -3). These latter phytoplankton blooms occurred in high salinity waters and were due to mixing of nutrient limited saline waters and nutrient rich river waters. The mean annual flux of phytoplankton carbon from the river Liffey was calculated at 23.5 t C y -1, of which half was accumulated or remineralised in the estuary and did not enter the Bay. In the Bay proper (Gp. IV) summer nutrient concentrations dropped below detection limits, and chlorophyll a concentrations followed the classic pattern with a spring bloom maximum of 5.5 mg chl a m -3. This pattern in nutrients and chlorophyll a came from the advection of waters into the Bay from an offshore source. Overall while there was considerable evidence for eutrophication in the estuary, the bay itself showed little biological response to nutrient loading.

Spatio-temporal structure and influence of environmental parameters on the Tipuloidea (Insecta: Diptera) assemblage of Neotropical salt marshes

NASA Astrophysics Data System (ADS)

Rodrigues, Lucas; Carrasco, Daiane; Proietti, Maíra

2017-10-01

Estuaries and salt marshes are important coastal ecosystems that present unique characteristics in terms of nutrient cycling, salinity, habitats, flora and fauna. Despite their ecological importance, there is scarce knowledge on the occupation, distribution and ecology of insects, including Tipuloidea, in these environments. This study aimed to evaluate the composition, seasonality and effect of abiotic factors on the abundance, diversity and structure of a Tipuloidea assemblage at the Patos Lagoon salt marshes, located at the south of the Neotropical region. We sampled crane-flies from three zones along the estuary by installing two Malaise traps at the low and high vegetation strata of each zone. Sampling was conducted uninterruptedly every fifteen days between August/2015 and July/2016, and collected insects were identified morphologically based on specific literature. 5248 crane-flies were identified covering six species and twenty-five morphospecies. Abundance and frenquency of occurrence of species revealed a gap in the presence of constant species at the middle estuary. Dicranomyia, Gonomyia, Teucholabis and Zelandotipula species were additional (accessory) species only in the upper estuary, while Symplecta cana only in the lower estuary. This shows that different species prefer distinct points along the estuary. Higher abundance of crane-flies was correlated with elevated temperature and humidity. Symplecta pilipes was an exception, presenting increase in abundance under lower temperatures. Seasonal change in Tipuloidea species composition was observed, with higher evenness of Dicranomyia, Geranomyia, Rhipidia domestica and Symplecta cana (15-20%) during summer, and dominance of Symplecta pilipes in winter (80%). The gap at the middle estuary can possibly be due to stress caused by large fluctuations in salinity in the zone. In addition, the seasonal differences can have significant ecological consequences such as the modification of the Tipuloid species that compose the detritivorous and/or succivorous trophic guild, and consequently influence the upper trophic levels of the salt marsh environment.

Habitat use by larval fishes in a temperate South African surf zone

NASA Astrophysics Data System (ADS)

Watt-Pringle, Peter; Strydom, Nadine A.

2003-12-01

Larval fishes were sampled in the Kwaaihoek surf zone on the south east coast of South Africa. On six occasions between February and May 2002, larval fishes were collected in two habitat types identified in the inner surf zone using a modified beach-seine net. The surf zone habitats were classified as either sheltered trough areas or adjacent exposed surf areas. Temperature, depth and current measurements were taken at all sites. Trough habitats consisted of a depression in surf topography characterised by reduced current velocities and greater average depth than adjacent surf areas. In total, 325 larval fishes were collected. Of these, 229 were collected in trough and 96 in surf habitats. At least 22 families and 37 species were represented in the catch. Dominant families were the Mugilidae, Sparidae, Atherinidae, and Engraulidae. Dominant species included Liza tricuspidens and Liza richardsonii (Mugilidae), Rhabdosargus holubi and Sarpa salpa (Sparidae), Atherina breviceps (Atherinidae) and Engraulis japonicus (Engraulide). Mean CPUE of postflexion larvae of estuary-dependent species was significantly greater in trough areas. The proportion of postflexion larval fishes in trough habitat was significantly greater than that of preflexion stages, a result that was not apparent in surf habitat sampled. CPUE of postflexion larvae of estuary-dependent fishes was negatively correlated with current magnitude and positively correlated with habitat depth. Mean body length of larval fishes was significantly greater in trough than in surf habitats. These results provide evidence that the CPUE of postflexion larvae of estuary-dependent fishes is higher in trough habitat in the surf zone and this may be indicative of active habitat selection for areas of reduced current velocity/wave action. The implications of this behaviour for estuarine recruitment processes are discussed.

Use of glacier river-fed estuary channels by juvenile coho salmon: transitional or rearing habitats?

USGS Publications Warehouse

Hoem Neher, Tammy D.; Rosenberger, Amanda E.; Zimmerman, Christian E.; Walker, Coowe M.; Baird, Steven J.

2014-01-01

Estuaries are among the most productive ecosystems in the world and provide important rearing environments for a variety of fish species. Though generally considered important transitional habitats for smolting salmon, little is known about the role that estuaries serve for rearing and the environmental conditions important for salmon. We illustrate how juvenile coho salmonOncorhynchus kisutch use a glacial river-fed estuary based on examination of spatial and seasonal variability in patterns of abundance, fish size, age structure, condition, and local habitat use. Fish abundance was greater in deeper channels with cooler and less variable temperatures, and these habitats were consistently occupied throughout the season. Variability in channel depth and water temperature was negatively associated with fish abundance. Fish size was negatively related to site distance from the upper extent of the tidal influence, while fish condition did not relate to channel location within the estuary ecotone. Our work demonstrates the potential this glacially-fed estuary serves as both transitional and rearing habitat for juvenile coho salmon during smolt emigration to the ocean, and patterns of fish distribution within the estuary correspond to environmental conditions.

Subtidal sea level variability in a shallow Mississippi River deltaic estuary, Louisiana

USGS Publications Warehouse

Snedden, G.A.; Cable, J.E.; Wiseman, W.J.

2007-01-01

The relative roles of river, atmospheric, and tidal forcings on estuarine sea level variability are examined in Breton Sound, a shallow (0.7 m) deltaic estuary situated in an interdistributary basin on the Mississippi River deltaic plain. The deltaic landscape contains vegetated marshes, tidal flats, circuitous channels, and other features that frictionally dissipate waves propagating through the system. Direct forcing by local wind stress over the surface of the estuary is minimal, owing to the lack of significant fetch due to landscape features of the estuary. Atmospheric forcing occurs almost entirely through remote forcing, where alongshore winds facilitate estuary-shelf exchange through coastal Ekman convergence. The highly frictional nature of the deltaic landscape causes the estuary to act as a low-pass filter to remote atmospheric forcing, where high-frequency, coastally-induced fluctuations are significantly damped, and the damping increases with distance from the estuary mouth. During spring, when substantial quantities of controlled Mississippi River inputs (q?? = 62 m3 s-1) are discharged into the estuary, upper estuary subtidal sea levels are forced by a combination of river and remote atmospheric forcings, while river effects are less clear downestuary. During autumn (q?? = 7 m3 s-1) sea level variability throughout the estuary is governed entirely by coastal variations at the marine boundary. A frequency-dependent analytical model, previously used to describe sea level dynamics forced by local wind stress and coastal forcing in deeper, less frictional systems, is applied in the shallow Breton Sound estuary. In contrast to deeper systems where coastally-induced fluctuations exhibit little or no frictional attenuation inside the estuary, these fluctuations in the shallow Breton Sound estuary show strong frequency-dependent amplitude reductions that extend well into the subtidal frequency spectrum. ?? 2007 Estuarine Research Federation.

Interdecadal changes in the community, population and individual levels of the fish fauna of an extensively modified estuary.

PubMed

Valesini, F J; Cottingham, A; Hallett, C S; Clarke, K R

2017-05-01

This study examined inter-period changes over two to three decades in the fish fauna of an urbanized estuary experiencing rapid population growth and a drying climate (Swan-Canning Estuary, Western Australia). Responses were compared at the fish community level (species composition; 1978-2009 in the shallows and 1993-2009 in deeper waters) and at the population and individual levels of an estuarine indicator species, black bream Acanthopagrus butcheri (biomass-abundance and per capita mass at age, respectively; 1993-2009). All three levels showed distinct shifts from earlier to later periods, but their patterns, sensitivity and breadth differed. Community composition changed markedly in the shallows of the lower-middle estuary between the late 1970s and all later periods and moderately between more disparate periods from 1995 to 2009. Several species trends could be linked to the increasing salinity of the estuary or declining dissolved oxygen levels in its middle-upper reaches. Community changes were, however, small or insignificant in the shallow and deeper waters of the upper estuary and deeper waters of the middle estuary, where environmental perturbations are often most pronounced. This may reflect the resilience of the limited suite of species that typify those reaches and thus their lack of sensitivity in reflecting longer-term change at the coarser level of mean abundance. One such species, the selected indicator, A. butcheri, did, however, show marked temporal changes at both the population and individual levels. Biomass decreased markedly in deeper waters while increasing in the shallows from earlier to later periods, presumably reflecting an onshore movement of fish, and per capita body mass in the 2+, 3+ and 4+ year classes fell steadily over time. Such changes probably indicate deteriorating habitat quality in the deeper waters. The study outcomes provide support for a multifaceted approach to the biomonitoring of estuaries using fishes and highlight the need for complementary monitoring of relevant stressors to better disentangle cause-effect pathways. © 2017 The Fisheries Society of the British Isles.

Effectiveness of seining after electrofishing to characterize stream fish communities

USGS Publications Warehouse

Meador, Michael R.

2012-01-01

The richness and composition of species collected uniquely to electrofishing and subsequent seining efforts were examined at 271 stream sites across the USA by using wadeable electrofishing methods (backpack or barge electrofishing) or boat electrofishing followed by seining. Seining after wadeable electrofishing resulted in the collection of new species at 42% of sites, whereas seining after boat electrofishing resulted in the collection of new species at 87% of sites. Mean percentage of total observed fish species richness that was collected uniquely by seining was 6% (representing one new species, on average) after wadeable electrofishing compared with 18% (four new species, on average) after boat electrofishing. Shannon–Wiener diversity index values were not significantly different between data from combined sampling (electrofishing and seining) and data from wadeable electrofishing (P = 0.490) but were significantly different between boat electrofishing and combined sampling (P = 0.004). Seining efforts after boat electrofishing can provide critical information that allows for a more complete characterization of the fish community. For sampling in wadeable streams, decisions regarding the use of seines should consider the effectiveness of electrofishing at a given site and the use of seines as an alternative primary sampling gear rather than as a supplement to electrofishing.

SPM response to tide and river flow in the hyper-turbid Ems River

NASA Astrophysics Data System (ADS)

Winterwerp, Johan C.; Vroom, Julia; Wang, Zheng-B.; Krebs, Martin; Hendriks, Erik C. M.; van Maren, Dirk S.; Schrottke, Kerstin; Borgsmüller, Christine; Schöl, Andreas

2017-05-01

In this paper, we analyse the behaviour of fine sediments in the hyper-turbid Lower Ems River, with focus on the river's upper reaches, a stretch of about 25 km up-estuary of Terborg. Our analysis is based on long records of suspended particulate matter (SPM) from optical backscatter (OBS) measurements close to the bed at seven stations along the river, records of salinity and water level measurements at these stations, acoustic measurements on the vertical mud structure just up-estuary of Terborg and oxygen profiles in the lower 3 m of the water column close to Leerort and Terborg. Further, we use cross-sectionally averaged velocities computed with a calibrated numerical model. Distinction is made between four timescales, i.e. the semi-diurnal tidal timescale, the spring-neap tidal timescale, a timescale around an isolated peak in river flow (i.e. about 3 weeks) and a seasonal timescale. The data suggest that a pool of fluid/soft mud is present in these upper reaches, from up-estuary of Papenburg to a bit down-estuary of Terborg. Between Terborg and Gandersum, SPM values drop rapidly but remain high at a few gram per litre. The pool of fluid/soft mud is entrained/mobilized at the onset of flood, yielding SPM values of many tens gram per litre. This suspension is transported up-estuary with the flood. Around high water slack, part of the suspension settles, being remixed during ebb, while migrating down-estuary, but likely not much further than Terborg. Around low water slack, a large fraction of the sediment settles, reforming the pool of fluid mud. The rapid entrainment from the fluid mud layer after low water slack is only possible when the peak flood velocity exceeds a critical value of around 1 m/s, i.e. when the stratified water column seems to become internally supercritical. If the peak flood velocity does not reach this critical value, f.i. during neap tide, fluid mud is not entrained up to the OBS sensors. Thus, it is not classical tidal asymmetry, but the peak flood velocity itself which governs the hyper-turbid state in the Lower Ems River. The crucial role of river flow and river floods is in reducing these peak flood velocities. During elongated periods of high river flow, in e.g. wintertime, SPM concentrations reduce, and the soft mud deposits consolidate and possibly become locally armoured as well by sand washed in from the river. We have no observations that sediments are washed out of the hyper-turbid zone. Down-estuary of Terborg, where SPM values do not reach hyper-turbid conditions, the SPM dynamics are governed by classical tidal asymmetry and estuarine circulation. Hence, nowhere in the river, sediments are flushed from the upper reaches of the river into the Ems-Dollard estuary during high river flow events. However, exchange of sediment between river and estuary should occur because of tide-induced dispersion.

How Hydrodynamics Control Algal Blooms in the Ythan Estuary, Scotland

NASA Astrophysics Data System (ADS)

Champangern, K.; Hoey, T.; Thomas, R.; Mitchard, E. T.

2016-12-01

The Ythan estuary, northeast Scotland, was designated in 2000 as a Nitrate Vulnerable Zone (NVZ) under the European Commission (EC) Nitrates Directive. Much of the catchment is intensively farmed and water quality has been adversely affected by nutrients from agricultural fertilisers. As a result, algal mats develop annually on tidal flats where sediment from upstream and from the adjacent dune systems is deposited. Understanding the patterns of water (river and ocean) circulation in the estuary as well as nutrient transport in the estuary is crucial for comprehending the role of several factors (elevation; sediment characteristics; nutrient flux) control the locations and scale of annual algal blooms. To understand the controls, the Delft3d flow model is used to simulate hydrodynamic patterns and nutrient pathways in the estuary during high flow and low flow events. The results from the simulations reveal that during high river flow in the central part of the estuary, where algal growth is most extensive, flow velocity are higher during flood tide than in the ebb. However, the velocity in this area remain very low throughout the tidal cycle. During low river flow, the velocity during one tidal cycle has the same pattern as in high flow event, although the velocity is generally slightly higher than during high river flow except during slack tide where velocity and shear stress are lower. The modelled nutrient pathways and their concentration also show the movement of nutrients with regard to interaction of both fresh and sea water. The concentration is greatest during low tide in the upper estuary followed by middle and lower estuary, while appearing lowest during high tide. The nutrients mobilise along the main channel where velocity is greater. However, they are also dispersed to shallower areas where algal growth is extensive and remain high concentrated in the areas until a new flood tide. These model results are validated against measured data, of which the validation results illustrate a good agreement with the measured data. Moreover, these results are clearly consistent with areas where extensive algal growth occurs in upper and middle estuary derived from satellite image classification. This study suggests that hydrodynamics strongly controls over persistence of algal formation in location and extent.

Decadal changes in the ichthyofauna of a eutrophic estuary following a remedial engineering modification and subsequent environmental shifts

NASA Astrophysics Data System (ADS)

Potter, Ian C.; Veale, Lauren; Tweedley, James R.; Clarke, K. Robert

2016-11-01

This study has determined how the characteristics of the ichthyofauna of a large eutrophic microtidal estuary changed, initially in response to major structural remedial modifications, and then, during later years, as the environment became further modified, due mainly to effects of climate change. Data on the ichthyofauna of the Peel-Harvey Estuary, in south-western Australia, were derived firstly by seining seasonally in five regions over two consecutive twelve months (two years) in 2008-10. These data were then collated with those recorded previously using the same sampling regime throughout 1980 and 1981, when massive macroalgal growths were present, and throughout 1996 and 1997, soon after the opening, in 1994, of an artificial, deep and second entrance channel. The latter resulted in greater tidal flushing, consistently high salinities and reduced macroalgal biomass. Ichthyofaunal composition changed significantly overall and in four of the five regions across the three periods. Although increased tidal exchange did not lead to a rise in the number either of those marine species that typically use estuaries as nursery areas (marine estuarine-opportunists) or of those that complete their life cycle within the estuary (estuarine residents), the contributions made by the abundances of the representatives of those two groups to the total catch of fish varied markedly between periods. Those differences were largely responsible for the inter-period changes in species composition. In contrast to the situation with marine estuarine-opportunists, increased tidal exchange and higher salinities resulted in a greater number of marine straggler species entering the system, albeit in low numbers. The ichthyofauna during 1980-81 contained relatively large numbers of species that are typically associated with macrophytes, including marine estuarine-opportunists, e.g. Pelates octolineatus, and estuarine residents e.g. Ostorhinchus rueppellii and Hyporhamphus regularis. Following the opening of the artificial entrance channel, the relative abundances of these three macrophyte-associated species declined, whereas those of species, e.g. the marine estuarine-opportunist Torquigener pleurogramma and estuarine resident Favonigobius lateralis, which typically occur over unvegetated areas and in elevated salinities, increased. By 2008-10, such species had become more abundant, following declines in freshwater discharge and a longer persistence of high salinities, with macrophyte-associated species, e.g. the marine estuarine-opportunists P. octolineatus, Gymnapistes marmoratus and Haletta semifasciata and estuarine resident O. rueppellii, becoming more numerous as macroalgal and seagrass areas became better developed. This study demonstrates the great value of long-term data sets for detecting and predicting the effects of major structural changes and climate change on the faunas of estuaries.

Response of the turbidity maximum zone in the Yangtze River Estuary due to human activities during the dry season.

PubMed

Chen, Xiaofeng; Shen, Zhenyao; Yang, Ye

2016-09-01

The interaction between a river and the sea results in a turbidity maximum zone (TMZ) within the estuary, which has a great impact on the local ecosystem. In the Yangtze River Estuary, the magnitude and extent of the TMZ vary with water discharge. In this study, the cumulative human activity altered the water discharge regime from the river to the estuary. In the post-Three Gorges Dam (TGD) period, water discharge increased by 35.10 % at Datong in February compared with that in the pre-TGD period. The effects of water discharge variation on the characteristics of the TMZ were analyzed during spring and neap tidal periods using the three-dimensional environmental fluid dynamic code (EFDC) model. The area of the TMZ decreased by 3.11 and 17.39 % during neap and spring tides, respectively. In addition, the upper limit of the TMZ moved 11.68 km seaward during neap tide, whereas the upper limit of the TMZ in the upstream and downstream areas moved seaward 9.65 and 2.34 km, respectively, during spring tide. These findings suggest that the area and location of the TMZ are more sensitive to upstream runoff during spring tide than during neap tide. These changes in the TMZ will impact the biochemical processes in the Yangtze River Estuary. In the foreseeable future, the distribution characteristic of TMZ will inevitably change due to variations in the Yangtze River discharge resulting from new human activities (i.e., new dams), which are being constructed upstream in the Yangtze River system.

Influence of salinity on prevalence of the parasite Loxothylacus panopaei in the xanthid Panopeus obesus in SW Florida.

PubMed

Tolley, S Gregory; Winstead, James T; Haynes, Lesli; Volety, Aswani K

2006-06-23

This study was conducted to examine the potential influence of salinity, a proxy for freshwater inflow, on the prevalence of the castrator parasite Loxothylacus panopaei on saltmarsh mud crabs Panopeus obesus on SW Florida oyster reefs. Spatial and seasonal patterns of the presence of potential host crabs and the prevalence of the parasite were assessed in the Caloosahatchee, Estero, and Faka Union estuaries. Lift nets (1 m2) containing 5 1 of oyster clusters were deployed on intertidal reefs at 3 sites along the salinity gradient of each estuary. Nets were deployed during 3 seasonally dry and 3 seasonally wet months for a period of 30 d. P. obesus densities tended to increase downstream in higher salinity waters, with crabs being absent from the upper station in the Caloosahatchee during both seasons and absent from the upper station of the Faka Union during wet months. Parasite prevalence was reduced upstream in each estuary during wet months compared to dry months, and for those estuaries that experienced higher relative levels of freshwater inflow. Furthermore, parasite prevalence was positively correlated with the mean salinity of capture of host crabs. Based on the distribution of P. obesus and the above patterns related to salinity, it appears that freshwater inflow and seasonal rains might regulate the prevalence of this parasite in SW Florida by creating spatiotemporal, low salinity refuges for its host.

Analysis of pelagic species decline in the upper San Francisco Estuary using multivariate autoregressive modeling (MAR)

USGS Publications Warehouse

Mac Nally, Ralph; Thomson, James R.; Kimmerer, Wim J.; Feyrer, Frederick; Newman, Ken B.; Sih, Andy; Bennett, William A.; Brown, Larry; Fleishman, Erica; Culberson, Steven D.; Castillo, Gonzalo

2010-01-01

Four species of pelagic fish of particular management concern in the upper San Francisco Estuary, California, USA, have declined precipitously since ca. 2002: delta smelt (Hypomesus transpacificus), longfin smelt (Spirinchus thaleichthys), striped bass (Morone saxatilis), and threadfin shad (Dorosoma petenense). The estuary has been monitored since the late 1960s with extensive collection of data on the fishes, their pelagic prey, phytoplankton biomass, invasive species, and physical factors. We used multivariate autoregressive (MAR) modeling to discern the main factors responsible for the declines. An expert-elicited model was built to describe the system. Fifty-four relationships were built into the model, only one of which was of uncertain direction a priori. Twenty-eight of the proposed relationships were strongly supported by or consistent with the data, while 26 were close to zero (not supported by the data but not contrary to expectations). The position of the 2‰ isohaline (a measure of the physical response of the estuary to freshwater flow) and increased water clarity over the period of analyses were two factors affecting multiple declining taxa (including fishes and the fishes' main zooplankton prey). Our results were relatively robust with respect to the form of stock–recruitment model used and to inclusion of subsidiary covariates but may be enhanced by using detailed state–space models that describe more fully the life-history dynamics of the declining species.

Analysis of pelagic species decline in the upper San Francisco Estuary using multivariate autoregressive modeling (MAR).

PubMed

Mac Nally, Ralph; Thomson, James R; Kimmerer, Wim J; Feyrer, Frederick; Newman, Ken B; Sih, Andy; Bennett, William A; Brown, Larry; Fleishman, Erica; Culberson, Steven D; Castillo, Gonzalo

2010-07-01

Four species of pelagic fish of particular management concern in the upper San Francisco Estuary, California, USA, have declined precipitously since ca. 2002: delta smelt (Hypomesus transpacificus), longfin smelt (Spirinchus thaleichthys), striped bass (Morone saxatilis), and threadfin shad (Dorosoma petenense). The estuary has been monitored since the late 1960s with extensive collection of data on the fishes, their pelagic prey, phytoplankton biomass, invasive species, and physical factors. We used multivariate autoregressive (MAR) modeling to discern the main factors responsible for the declines. An expert-elicited model was built to describe the system. Fifty-four relationships were built into the model, only one of which was of uncertain direction a priori. Twenty-eight of the proposed relationships were strongly supported by or consistent with the data, while 26 were close to zero (not supported by the data but not contrary to expectations). The position of the 2 per thousand isohaline (a measure of the physical response of the estuary to freshwater flow) and increased water clarity over the period of analyses were two factors affecting multiple declining taxa (including fishes and the fishes' main zooplankton prey): Our results were relatively robust with respect to the form of stock-recruitment model used and to inclusion of subsidiary covariates but may be enhanced by using detailed state-space models that describe more fully the life-history dynamics of the declining species.

75 FR 52722 - Taking and Importing of Marine Mammals

Federal Register 2010, 2011, 2012, 2013, 2014

2010-08-27

... International Dolphin Conservation Program (IDCP) by Spanish flag purse seine vessels or purse seine vessels operating under Spanish jurisdiction to be imported into the United States. The affirmative finding was... ETP by Spanish- flag purse seine vessels or purse seine vessels operating under Spanish jurisdiction...

The role of tidal marsh restoration in fish management in the San Francisco Estuary

USGS Publications Warehouse

Herbold, Bruce; Baltz, Donald; Brown, Larry R.; Grossinger, Robin; Kimmerer, Wim J.; Lehman, Peggy W.; Moyle, Peter B.; Nobriga, Matthew L.; Simenstad, Charles A.

2015-01-01

Tidal marsh restoration is an important management issue in the San Francisco Estuary (estuary). Restoration of large areas of tidal marsh is ongoing or planned in the lower estuary (up to 6,000 ha, Callaway et al. 2011). Large areas are proposed for restoration in the upper estuary under the Endangered Species Act biological opinions (3,237 ha) and the Bay Delta Conservation Plan (26,305 ha). In the lower estuary, tidal marsh has proven its value to a wide array of species that live within it (Palaima 2012). In the Sacramento–San Joaquin Delta (Delta), one important function ascribed to restoration of freshwater tidal marshes is that they make large contributions to the food web of fish in open waters (BDCP 2013). The Ecosystem Restoration Program ascribed a suite of ecological functions to tidal marsh restoration, including habitat and food web benefits to native fish (CDFW 2010). This background was the basis for a symposium, Tidal Marshes and Native Fishes in the Delta: Will Restoration Make a Difference? held at the University of California, Davis, on June 10, 2013. This paper summarizes conclusions the authors drew from the symposium.

Are there general spatial patterns of mangrove structure and composition along estuarine salinity gradients in Todos os Santos Bay?

NASA Astrophysics Data System (ADS)

Costa, Patrícia; Dórea, Antônio; Mariano-Neto, Eduardo; Barros, Francisco

2015-12-01

Species distribution and structural patterns of mangrove fringe forests along three tropical estuaries were evaluated in northeast of Brazil. Interstitial water salinity, percentage of fine sediments and organic matter content were investigated as explanatory variables. In all estuaries (Jaguaripe, Paraguaçu and Subaé estuaries), it was observed similar distribution patterns of four mangrove species and these patterns were mostly related with interstitial water salinity. Rhizophora mangle and Avicennia schaueriana tended to dominate sites under greater marine influence (lower estuary), while Avicennia germinans and Laguncularia racemosa dominated areas under greater freshwater influence (upper estuary), although the latter showed a wider distribution over these tropical estuarine gradients. Organic matter best explained canopy height and mean height. At higher salinities, there was practically no correlation between organic matter and density, but at lower salinity, organic matter was related to decreases in abundances. The described patterns can be related to interspecific differences in salt tolerance and competitive abilities and they are likely to be found at other tropical Atlantic estuaries. Future studies should investigate anthropic influences and causal processes in order to further improve the design of monitoring and restoration projects.

Indicators: Phytoplankton

EPA Pesticide Factsheets

Phytoplankton are free-floating, microscopic algae that inhabit the sunlit, upper layer of most freshwater and marine environments. They are usually responsible for the color and clarity of lakes, wetlands, rivers, streams and estuaries.

77 FR 50086 - Taking and Importing of Marine Mammals

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-20

... International Dolphin Conservation Program (IDCP) by Spanish-flag purse seine vessels or purse seine vessels operating under Spanish jurisdiction to be imported into the United States. The affirmative finding was... derived from yellowfin tuna harvested in the ETP by Spanish-flag purse seine vessels or purse seine...

77 FR 26744 - Fishing Capacity Reduction Program for the Southeast Alaska Purse Seine Salmon Fishery

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-07

... Capacity Reduction Program for the Southeast Alaska Purse Seine Salmon Fishery AGENCY: National Marine... of reduction payment tender of Southeast Alaska purse seine salmon permits. SUMMARY: The National... Southeast Alaska purse seine salmon fishery. The program authorizes NMFS to make payments to permit holders...

Spring hunting changes the regional movements of migrating greater snow geese

USGS Publications Warehouse

Bechet, A.; Giroux, J.-F.; Gauthier, G.; Nichols, J.D.; Hines, J.E.

2003-01-01

1. Human-induced disturbance such as hunting may influence the migratory behaviour of long-distance migrants. In 1999 and 2000 a spring hunt of greater snow geese Anser caerulescens atlanticus occurred for the first time in North America since 1916, aimed at stopping population growth to protect natural habitats. 2. We evaluated the impact of this hunt on the staging movements of geese along a 600-km stretch of the St. Lawrence River in southern Quebec, Canada. 3. We tracked radio-tagged female geese in three contiguous regions of the staging area from the south-west to the north-east: Lake St Pierre, Upper Estuary and Lower Estuary, in spring 1997 (n = 37) and 1998 (n = 70) before the establishment of hunting, and in 1999 (n = 60) and 2000 (n = 59) during hunting. 4. We used multi-state capture-recapture models to estimate the movement probabilities of radio-tagged females among these regions. To assess disturbance level, we tracked geese during their feeding trips and estimated the probability of completing a foraging bout without being disturbed. 5. In the 2 years without hunting, migration was strongly unidirectional from the south-west to the north-east, with very low westward movement probabilities. Geese gradually moved from Lake St Pierre to Upper Estuary and then from Upper Estuary to Lower Estuary. 6. In contrast, during the 2 years with hunting westward movement was more than four times more likely than in preceding years. Most of these backward movements occurred shortly after the beginning of the hunt, indicating that geese moved back to regions where they had not previously experienced hunting. 7. Overall disturbance level increased in all regions in years with hunting relative to years without hunting. 8. Synthesis and applications. We conclude that spring hunting changed the stopover scheduling of this long-distance migrant and might further impact population dynamics by reducing prenuptial fattening. The spring hunt may also have increased crop damage. We propose that staggered hunt opening dates could attenuate secondary effects of such management actions.

Nearshore Fish Distributions in an Alaskan Estuary in Relation to Stratification, Temperature and Salinity

NASA Astrophysics Data System (ADS)

Abookire, A. A.; Piatt, J. F.; Robards, M. D.

2000-07-01

Fish were sampled with beach seines and small-meshed beam trawls in nearshore (<1 km) and shallow (<25 m) habitats on the southern coast of Kachemak Bay, Cook Inlet, Alaska, from June to August, 1996-1998. Fish distributions among habitats were analysed for species composition, catch-per-unit-effort (CPUE) and frequency of occurrence. Two oceanographically distinct areas of Kachemak Bay were sampled and compared: the Outer Bay and the Inner Bay. Outer Kachemak Bay is exposed and receives oceanic, upwelled water from the Gulf of Alaska, whereas the Inner Bay is more estuarine. Thermohaline properties of bottom water in the Outer and Inner Bay were essentially the same, whereas the Inner Bay water-column was stratified with warmer, less saline waters near the surface. Distribution and abundance of pelagic schooling fish corresponded with area differences in stratification, temperature and salinity. The Inner Bay supported more species and higher densities of schooling and demersal fish than the Outer Bay. Schooling fish communities sampled by beach seine differed between the Outer and Inner Bays. Juvenile and adult Pacific sand lance ( Ammodytes hexapterus), Pacific herring ( Clupea harengus pallasi), osmerids (Osmeridae) and sculpins (Cottidae) were all more abundant in the Inner Bay. Gadids (Gadidae) were the only schooling fish taxa more abundant in the Outer Bay. Thermohaline characteristics of bottom water were similar throughout Kachemak Bay. Correspondingly, bottom fish communities were similar in all areas. Relative abundances (CPUE) were not significantly different between areas for any of the five demersal fish groups: flatfishes (Pleuronectidae), ronquils (Bathymasteridae), sculpins (Cottidae), gadids (Gadidae) and pricklebacks (Stichaeidae).

Nearshore fish distributions in an Alaskan estuary in relation to stratification, temperature, and salinity

USGS Publications Warehouse

Abookire, Alisa A.; Piatt, John F.; Robards, Martin D.

2000-01-01

Fish were sampled with beach seines and small-meshed beam trawls in nearshore ( < 1 km) and shallow ( < 25 m) habitats on the southern coast of Kachemak Bay, Cook Inlet, Alaska, from June to August, 1996-1998. Fish distributions among habitats were analysed for species composition, catch-per-unit-effort (CPUE) and frequency of occurrence. Two oceanographically distinct areas of Kachemak Bay were sampled and compared: the Outer Bay and the Inner Bay. Outer Kachemak Bay is exposed and receives oceanic, upwelled water from the Gulf of Alaska, whereas the Inner Bay is more estuarine. Thermohaline properties of bottom water in the Outer and Inner Bay were essentially the same, whereas the Inner Bay water-column was stratified with warmer, less saline waters near the surface. Distribution and abundance of pelagic schooling fish corresponded with area differences in stratification, temperature and salinity. The Inner Bay supported more species and higher densities of schooling and demersal fish than the Outer Bay. Schooling fish communities sampled by beach seine differed between the Outer and Inner Bays. Juvenile and adult Pacific sand lance (Ammodytes hexapterus), Pacific herring (Clupea harengus pallasi), osmerids (Osmeridae) and sculpins (Cottidae) were all more abundant in the Inner Bay. Gadids (Gadidae) were the only schooling fish taxa more abundant in the Outer Bay. Thermohaline characteristics of bottom water were similar throughout Kachemak Bay. Correspondingly, bottom fish communities were similar in all areas. Relative abundances (CPUE) were not significantly different between areas for any of the five demersal fish groups: flatfishes (Pleuronectidae), ronquils (Bathymasteridae), sculpins (Cottidae), gadids (Gadidae) and pricklebacks (Stichaeidae).

The Fish Assemblage of a Newfoundland Estuary: Diel, Monthly and Annual Variation

NASA Astrophysics Data System (ADS)

Methven, D. A.; Haedrich, R. L.; Rose, G. A.

2001-06-01

Twice monthly sampling over two 16 month periods at a shallow site on Newfoundland's east coast showed the fish assemblage to be dominated by four taxa ( Gasterosteus aculeatus, G. wheatlandi, Osmerus mordax, Gadus spp.) that accounted for 96% of the individuals collected. Of the 16 479 fish measured, 65% were adults based on the estimated size of first spawning. The fish assemblage was dominated (86%) by species with demersal eggs, several of which spawn at the same shallow sites used by juveniles as nursery sites. Coastal spawning and demersal eggs maintain offspring in coastal nursery areas where survival is thought to be increased. Number of species and number of fish were both correlated with water temperature being highest from mid-summer to early autumn and lowest in winter. Temperature, time of spawning, and movements of juveniles and adults facilitated grouping species into five assemblages based on seasonal abundance: seasonal periodic species (summer and winter), regular species, regular species collected in all seasons except winter, and occasional (rare) species. At the diel scale, two consistent species groupings were observed: species that showed no significant difference between day and night and species caught primarily at night. Number of night species exceeded day species by a factor of two. No seine-caught species in shallow water exhibited significantly higher catches during the day. Observations by SCUBA divers indicated some species were more abundant during day time at slightly deeper depths. This observation in conjunction with day and night seining in shallower water, suggests these species aggregate in deeper water during day and move to shallow waters at night.

Carbonate system and nutrients in the Pearl River estuary, China: Seasonal and inter-annual variations

NASA Astrophysics Data System (ADS)

Guo, X.

2017-12-01

Located in southern China and surrounded by several metropolis, the Pearl River estuary is a large subtropical estuary under significant human perturbation. We examined the impact of sewage treatment rate on the water environmental factors. Carbonate system parameters (Dissolved inorganic carbon or DIC, Total alkalinity or TA, and pH), and nutrients were surveyed in the Pearl River estuary from 2000 to 2015. Spatially, concentrations of nutrients were high at low salinity and decreased with salinity in both wet and dry seasons although seasonal variation occurred. However, distribution patterns of DIC and TA differed in wet and dry seasons. In wet season, both DIC and TA were low at low salinity (600-1500 umol kg-1) and increased with salinity, but in dry season they were high at low salinity (3000-3500 umol kg-1) and decreased with salinity. Compared with the years before 2010, both values and distribution patterns of DIC, TA and pH were similar among the years in wet season, but they were conspicuously different in the upper estuary in dry season. Both DIC and TA were more than 1000 umol kg-1 lower than those in the years before 2010. For nutrients at low salinity, the ammonia concentration was much lower in the years after 2010 (200 vs. 400 umol kg-1 in wet season and 400 vs. 800 umol kg-1 in dry season), but nitrate concentration was slightly higher (180 vs 120 mmol kg-1 in wet season and 200 vs 180 mmol kg-1 in dry season). As a reference, carbonate system parameters and nutrients were stable among the 16 years in the adjacent northern South China Sea. The variations in biogeochemical processes induced by nutrients concentration and structure as a result of sewage discharge will be discussed in detail. The decrease in DIC, TA and nutrients in the upper Pearl River estuary after 2010 was due mainly to the improvement of sewage treatment rate and capacity.

Holocene environmental and parasequence development of the St. Jones Estuary, Delaware (USA): Foraminiferal proxies of natural climatic and anthropogenic change

USGS Publications Warehouse

Leorri, E.; Martin, R.; McLaughlin, P.

2006-01-01

The benthic foraminiferal record of marshes located along western Delaware Bay (St. Jones Estuary, USA) reflects the response of estuaries to sea-level and paleoclimate change during the Holocene. System tracts are recognized and within them parasequences based on sedimentological and foraminiferal assemblages identification. The parasequences defined by foraminiferal assemblages appear correlative with rapid Holocene climate changes that are of worldwide significance: 6000-5000, 4200-3800, 3500-2500, 1200-1000, and 600??cal years BP. Following postglacial sea-level rise, modern subestuaries and marshes in the region began to develop between 6000 and 4000??years BP, depending on their proximity to the mouth of Delaware Bay and coastal geomorphology. Initial sediments were fluvial in origin, with freshwater marshes established around 4000??years BP. The subsequent sea-level transgression occurred sufficiently slowly that freshwater marshes alternated with salt marshes at the same sites to around 3000??years BP. Locally another two transgressions are identified at 1800 and 1000??years BP respectively. Marine influence increased in the estuaries until 600??years BP (Little Ice Age), when regression occurred. Sea-level began to rise again during the mid-19th Century at the end of the Little Ice Age, when marshes became established. The presence of a sand lens in the upper and middle estuary and the reduction in the number of tests in the top samples in cores from the same area also suggest an anthropogenic influence. The estuary infill resulted in a sharp transgressive sequence, represented by salt marsh foraminiferal assemblages in the upper part of the cores. The increase in marsh foraminifera in both areas suggests an increase in marine influence that might be due to the transgression beginning at the end of the Little Ice Age about 150-180??years ago coupled with anthropogenic straightening of the channel in 1913. ?? 2006 Elsevier B.V. All rights reserved.

Salinity and turbidity distributions in the Brisbane River estuary, Australia

NASA Astrophysics Data System (ADS)

Yu, Yingying; Zhang, Hong; Lemckert, Charles

2014-11-01

The Brisbane River estuary (BRE) in Australia not only plays a vital role in ecosystem health, but is also of importance for people who live nearby. Comprehensive investigations, both in the short- and long-term, into the salinity and turbidity distributions in the BRE were conducted. Firstly, the analysis of numerical results revealed that the longitudinal salinity varied at approximately 0.45 and 0.61 psu/h during neap and spring tides, respectively. The turbidity stayed at a higher level and was less impacted by tide in the upper estuary, however, the water cleared up while the tide changed from flood to ebb in the mid and lower estuary. The second investigation into the seasonal variations of salinity and turbidity in the BRE was conducted, using ten-year field measurement data. A fourth-order polynomial equation was proposed, describing the longitudinal variation in salinity dilution changes as the upstream distance in the BRE during the wet and dry seasons. From the observation, the mid and upper estuaries were vertically well-mixed during both seasons, but the lower BRE was stratified, particularly during the wet season. The estuary turbidity maximum (ETM) zone was about 10 km longer during the wet season than the dry season. Particular emphasis was given to the third investigation into the use of satellite remote sensing techniques for estimation of the turbidity level in the BRE. A linear relationship between satellite observed water reflectance and surface turbidity level in the BRE was validated with an R2 of 0.75. The application of satellite-observed water reflectance therefore provided a practical solution for estimating surface turbidity levels of estuarine rivers not only under normal weather conditions, but also during flood events. The results acquired from this study are valuable for further hydrological research in the BRE and particularly prominent for immediate assessment of flood impacts.

Nitrate Reduction Functional Genes and Nitrate Reduction Potentials Persist in Deeper Estuarine Sediments. Why?

PubMed Central

Papaspyrou, Sokratis; Smith, Cindy J.; Dong, Liang F.; Whitby, Corinne; Dumbrell, Alex J.; Nedwell, David B.

2014-01-01

Denitrification and dissimilatory nitrate reduction to ammonium (DNRA) are processes occurring simultaneously under oxygen-limited or anaerobic conditions, where both compete for nitrate and organic carbon. Despite their ecological importance, there has been little investigation of how denitrification and DNRA potentials and related functional genes vary vertically with sediment depth. Nitrate reduction potentials measured in sediment depth profiles along the Colne estuary were in the upper range of nitrate reduction rates reported from other sediments and showed the existence of strong decreasing trends both with increasing depth and along the estuary. Denitrification potential decreased along the estuary, decreasing more rapidly with depth towards the estuary mouth. In contrast, DNRA potential increased along the estuary. Significant decreases in copy numbers of 16S rRNA and nitrate reducing genes were observed along the estuary and from surface to deeper sediments. Both metabolic potentials and functional genes persisted at sediment depths where porewater nitrate was absent. Transport of nitrate by bioturbation, based on macrofauna distributions, could only account for the upper 10 cm depth of sediment. A several fold higher combined freeze-lysable KCl-extractable nitrate pool compared to porewater nitrate was detected. We hypothesised that his could be attributed to intracellular nitrate pools from nitrate accumulating microorganisms like Thioploca or Beggiatoa. However, pyrosequencing analysis did not detect any such organisms, leaving other bacteria, microbenthic algae, or foraminiferans which have also been shown to accumulate nitrate, as possible candidates. The importance and bioavailability of a KCl-extractable nitrate sediment pool remains to be tested. The significant variation in the vertical pattern and abundance of the various nitrate reducing genes phylotypes reasonably suggests differences in their activity throughout the sediment column. This raises interesting questions as to what the alternative metabolic roles for the various nitrate reductases could be, analogous to the alternative metabolic roles found for nitrite reductases. PMID:24728381

Anatomy of anomalously thick sandstone units in the Brent Delta of the northern North Sea

NASA Astrophysics Data System (ADS)

Wei, Xiaojie; Steel, Ronald J.; Ravnås, Rodmar; Jiang, Zaixing; Olariu, Cornel; Ma, Yinsheng

2018-05-01

Some potentially attractive reservoirs, containing anomalously thick (10s to a few 100 m), cross-stratified sandstone, have been locally encountered within both the classic regressive (lower Brent) and the transgressive (upper Brent) segments of the Brent Delta. Three documented cases of these sandstone bodies are re-examined. They are internally dominated by simple or compound dunes, and typified by two types of deepening-upward succession, recording a retrogradational or transgressive shoreline history. Type I is expressed as a single estuarine succession changing upwards from erosive, coarse-grained channelized deposits into outer estuary tidal bar deposits. The estuary is underlain and overlain by deltaic deposits. Type II lacks significant basal river deposits but is composed by stacked mixed-energy and tide-dominated estuarine deposits. It is underlain by deltaic deposits and overlain by open marine sediments. Considering the structural evolution in the northern North Sea basin, we suggest (as did some earlier researchers) that these sandstone bodies were local, but sometimes broad transgressive estuaries, formed at any time during large-scale Brent Delta growth and decay. The estuary generation was likely triggered by fluvial incision coupled with active faulting, producing variable accommodation embayments, where tidal currents became focused and deposition became transgressive. The spatial variations of the interpreted estuary deposits were linked with variable, fault-generated accommodation. The relatively simple, lower Brent estuarine units were created by short-lived, fault activity in places, whereas the complex, stacked upper-Brent estuarine units were likely a result of more long-lived, punctuated fault-induced subsidence leading into the northern North Sea main rifting stage. The thick cross-stratified units potentially accumulated in the hangingwall of large bounding faults.

78 FR 33810 - Fishing Capacity Reduction Program for the Southeast Alaska Purse Seine Salmon Fishery

Federal Register 2010, 2011, 2012, 2013, 2014

2013-06-05

... Capacity Reduction Program for the Southeast Alaska Purse Seine Salmon Fishery AGENCY: National Marine... reduction loan for the fishing capacity reduction program in the Southeast Alaska purse seine salmon fishery... July 22, 2012. Since then, all harvesters of Southeast Alaska purse seine salmon must pay the fee and...

77 FR 41754 - Fishing Capacity Reduction Program for the Southeast Alaska Purse Seine Salmon Fishery

Federal Register 2010, 2011, 2012, 2013, 2014

2012-07-16

... Capacity Reduction Program for the Southeast Alaska Purse Seine Salmon Fishery AGENCY: National Marine... program in the Southeast Alaska purse seine salmon fishery. NMFS conducted a referendum to approve the..., Chief, Financial Services Division, NMFS, Attn: SE Alaska Purse Seine Salmon Buyback, 1315 East-West...

Condition of larval and early juvenile Japanese temperate bass Lateolabrax japonicus related to spatial distribution and feeding in the Chikugo estuarine nursery ground in the Ariake Bay, Japan

NASA Astrophysics Data System (ADS)

Islam, Md. Shahidul; Hibino, Manabu; Nakayama, Kouji; Tanaka, Masaru

2006-02-01

The present study investigates feeding and condition of larval and juvenile Japanese temperate bass Lateolabrax japonicus in relation to spatial distribution in the Chikugo estuary (Japan). Larvae were collected in a wide area covering the nursery grounds of the species in 2002 and 2003. Food habits of the fish were analysed by examining their gut contents. Fish condition was evaluated by using morphometric (the length-weight relationship and condition factor) and biochemical (the RNA:DNA ratio and other nucleic acid based parameters) indices and growth rates. The nucleic-acid contents in individually frozen larvae and juveniles were quantified by standard fluorometric methods. Two distinct feeding patterns, determined by the distribution of prey copepods, were identified. The first pattern showed dependence on the calanoid copepod Sinocalanus sinensis, which was the single dominant prey in low-saline upper river areas. The second pattern involved a multi-specific dietary habit mainly dominated by Acartia omorii, Oithona davisae, and Paracalanus parvus. As in the gut contents analyses, two different sets of values were observed for RNA, DNA, total protein, growth rates and for all the nucleic acid-based indices: one for the high-saline downstream areas and a second for the low-saline upstream areas, which was significantly higher than the first. The proportion of starving fish was lower upstream than downstream. Values of the allometric coefficient ( b) and the condition factor ( K) obtained from the length-weight relationships increased gradually from the sea to the upper river. Clearly, fish in the upper river had a better condition than those in the lower estuary. RNA:DNA ratios correlated positively with temperature and negatively with salinity. We hypothesise that by migration to the better foraging grounds of the upper estuary (with higher prey biomass, elevated temperature and reduced salinity), the fish reduce early mortality and attain a better condition. We conclude that utilisation of the copepod S. sinensis in the upstream nursery grounds is one of the key early survival strategies in Japanese temperate bass in the Chikugo estuary.

Population dynamics of Corbicula fluminea (Müller, 1774) in mesohaline and oligohaline habitats: Invasion success in a Southern Europe estuary

USGS Publications Warehouse

Franco, J.N.; Ceia, F.R.; Patricio, J.; Thompson, John; Marques, J.C.; Neto, J.M.

2012-01-01

Due to its range expansion and potential ecological effects, Corbicula fluminea is considered one of the most important non-indigenous species (NIS) in aquatic ecosystems. Its presence since 2003 in the upstream area of Mondego estuary (oligohaline and mesohaline sectors) was studied during thirteen months, from December 2007 to December 2008. Monthly mean abundance and biomass ranged from 542 to 11142 individuals m-2 and 13.1–20.4 g Ash Free Dry Weight m-2, respectively. Populations of C.fluminea were composed mostly of juveniles, always present in extremely high densities compared to other estuarine ecosystems (e.g. Minho estuary) suggesting a continuous recruitment pattern. The hydraulic regime of the River Mondego favours the downstream colonization of the upper Mondego estuary by recruits produced upstream. However, salinity in these sectors of the estuary apparently neither favours growth nor the establishment of structured populations of this species. Other factors like contaminants and predation, which were not studied, could also contribute to the community structure observed.

Sources and distribution of aromatic hydrocarbons in a tropical marine protected area estuary under influence of sugarcane cultivation.

PubMed

Arruda-Santos, Roxanny Helen de; Schettini, Carlos Augusto França; Yogui, Gilvan Takeshi; Maciel, Daniele Claudino; Zanardi-Lamardo, Eliete

2018-05-15

Goiana estuary is a well preserved marine protected area (MPA) located on the northeastern coast of Brazil. Despite its current state, human activities in the watershed represent a potential threat to long term local preservation. Dissolved/dispersed aromatic hydrocarbons and polycyclic aromatic hydrocarbons (PAHs) were investigated in water and sediments across the estuarine salt gradient. Concentration of aromatic hydrocarbons was low in all samples. According to results, aromatic hydrocarbons are associated to suspended particulate matter (SPM) carried to the estuary by river waters. An estuarine turbidity maximum (ETM) was identified in the upper estuary, indicating that both sediments and contaminants are trapped prior to an occasional export to the adjacent sea. PAHs distribution in sediments were associated with organic matter and mud content. Diagnostic ratios indicated pyrolytic processes as the main local source of PAHs that are probably associated with sugarcane burning and combustion engines. Low PAH concentrations probably do not cause adverse biological effects to the local biota although their presence indicate anthropogenic contamination and pressure on the Goiana estuary MPA. Copyright © 2017 Elsevier B.V. All rights reserved.

amoA Gene Abundances and Nitrification Potential Rates Suggest that Benthic Ammonia-Oxidizing Bacteria and Not Archaea Dominate N Cycling in the Colne Estuary, United Kingdom

PubMed Central

Li, Jialin; Nedwell, David B.; Beddow, Jessica; Dumbrell, Alex J.; McKew, Boyd A.; Thorpe, Emma L.

2014-01-01

Nitrification, mediated by ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA), is important in global nitrogen cycling. In estuaries where gradients of salinity and ammonia concentrations occur, there may be differential selections for ammonia-oxidizer populations. The aim of this study was to examine the activity, abundance, and diversity of AOA and AOB in surface oxic sediments of a highly nutrified estuary that exhibits gradients of salinity and ammonium. AOB and AOA communities were investigated by measuring ammonia monooxygenase (amoA) gene abundance and nitrification potentials both spatially and temporally. Nitrification potentials differed along the estuary and over time, with the greatest nitrification potentials occurring mid-estuary (8.2 μmol N grams dry weight [gdw]−1 day−1 in June, increasing to 37.4 μmol N gdw−1 day−1 in January). At the estuary head, the nitrification potential was 4.3 μmol N gdw−1 day−1 in June, increasing to 11.7 μmol N gdw−1 day−1 in January. At the estuary head and mouth, nitrification potentials fluctuated throughout the year. AOB amoA gene abundances were significantly greater (by 100-fold) than those of AOA both spatially and temporally. Nitrosomonas spp. were detected along the estuary by denaturing gradient gel electrophoresis (DGGE) band sequence analysis. In conclusion, AOB dominated over AOA in the estuarine sediments, with the ratio of AOB/AOA amoA gene abundance increasing from the upper (freshwater) to lower (marine) regions of the Colne estuary. These findings suggest that in this nutrified estuary, AOB (possibly Nitrosomonas spp.) were of major significance in nitrification. PMID:25326303

amoA Gene abundances and nitrification potential rates suggest that benthic ammonia-oxidizing bacteria and not Archaea dominate N cycling in the Colne Estuary, United Kingdom.

PubMed

Li, Jialin; Nedwell, David B; Beddow, Jessica; Dumbrell, Alex J; McKew, Boyd A; Thorpe, Emma L; Whitby, Corinne

2015-01-01

Nitrification, mediated by ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA), is important in global nitrogen cycling. In estuaries where gradients of salinity and ammonia concentrations occur, there may be differential selections for ammonia-oxidizer populations. The aim of this study was to examine the activity, abundance, and diversity of AOA and AOB in surface oxic sediments of a highly nutrified estuary that exhibits gradients of salinity and ammonium. AOB and AOA communities were investigated by measuring ammonia monooxygenase (amoA) gene abundance and nitrification potentials both spatially and temporally. Nitrification potentials differed along the estuary and over time, with the greatest nitrification potentials occurring mid-estuary (8.2 μmol N grams dry weight [gdw](-1) day(-1) in June, increasing to 37.4 μmol N gdw(-1) day(-1) in January). At the estuary head, the nitrification potential was 4.3 μmol N gdw(-1) day(-1) in June, increasing to 11.7 μmol N gdw(-1) day(-1) in January. At the estuary head and mouth, nitrification potentials fluctuated throughout the year. AOB amoA gene abundances were significantly greater (by 100-fold) than those of AOA both spatially and temporally. Nitrosomonas spp. were detected along the estuary by denaturing gradient gel electrophoresis (DGGE) band sequence analysis. In conclusion, AOB dominated over AOA in the estuarine sediments, with the ratio of AOB/AOA amoA gene abundance increasing from the upper (freshwater) to lower (marine) regions of the Colne estuary. These findings suggest that in this nutrified estuary, AOB (possibly Nitrosomonas spp.) were of major significance in nitrification. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Adjustment of the San Francisco estuary and watershed to decreasing sediment supply in the 20th century

USGS Publications Warehouse

Schoellhamer, David H.; Wright, Scott A.; Drexler, Judith Z.

2013-01-01

The general progression of human land use is an initial disturbance (e.g., deforestation, mining, agricultural expansion, overgrazing, and urbanization) that creates a sediment pulse to an estuary followed by dams that reduce sediment supply. We present a conceptual model of the effects of increasing followed by decreasing sediment supply that includes four sequential regimes, which propagate downstream: a stationary natural regime, transient increasing sediment supply, transient decreasing sediment supply, and a stationary altered regime. The model features characteristic lines that separate the four regimes. Previous studies of the San Francisco Estuary and watershed are synthesized in the context of this conceptual model. Hydraulic mining for gold in the watershed increased sediment supply to the estuary in the late 1800s. Adjustment to decreasing sediment supply began in the watershed and upper estuary around 1900 and in the lower estuary in the 1950s. Large freshwater flow in the late 1990s caused a step adjustment throughout the estuary and watershed. It is likely that the estuary and watershed are still capable of adjusting but further adjustment will be as steps that occur only during greater floods than previously experienced during the adjustment period. Humans are actively managing the system to try to prevent greater floods. If this hypothesis of step changes occurring for larger flows is true, then the return interval of step changes will increase or, if humans successfully control floods in perpetuity, there will be no more step changes.

Temperature as a tracer of hydrological dynamics in an anchialine cave system with a submarine spring

NASA Astrophysics Data System (ADS)

Domínguez-Villar, David; Cukrov, Neven; Krklec, Kristina

2018-06-01

Although temperature is a nonconservative tracer, it often provides useful information to understand hydrological processes. This study explores the potential of temperature to characterize the hydrological dynamics of a submarine spring and its coastal karst aquifer in Krka Estuary (Croatia). The estuary is well stratified and its water column has a clear thermocline. A network of loggers was designed to monitor the temperature along vertical profiles in the estuary and the coastal aquifer, taking advantage of an anchialine cave that enabled access to the subterranean estuary. The location of the thermocline in the groundwater, which defines the upper boundary of the saline intrusion, depends on (1) the recharge of the aquifer via infiltration of precipitation, (2) the evolution of the thermocline in the estuary, and (3) the tidal oscillations. The sources of water flowing though the anchialine cave were identified: brackish water from the estuary above the thermocline, saline water from the estuary below the thermocline, and freshwater from infiltrated precipitation. A conceptual model is described that characterizes the hydrological dynamics of this coastal aquifer and its interactions with the estuary. Thus, at least for some hydrological settings, temperature is a valid tracer to characterize the main hydrological processes. The measurement of temperature is inexpensive compared to other (conservative) tracers. Therefore, for those hydrological settings that have water masses with distinct temperatures, the use of temperature as a tracer to establish conceptual models of the hydrological dynamics is encouraged.

Health of white sucker within the St. Louis River area of concern associated with habitat usage as assessed using stable isotopes

EPA Science Inventory

In Spring 2011, 200 adult white sucker were collected in four areas of the St. Louis River Area of Concern (AOC), located in Minnesota and Wisconsin, USA. The areas included the upper AOC as a reference area, the upper estuary, St. Louis Bay and Superior Bay. Grossly visible abno...

A comparison of shoreline seines with fyke nets for sampling littoral fish communities in floodplain lakes

USGS Publications Warehouse

Clark, S.J.; Jackson, J.R.; Lochmann, S.E.

2007-01-01

We compared shoreline seines with fyke nets in terms of their ability to sample fish species in the littoral zone of 22 floodplain lakes of the White River, Arkansas. Lakes ranged in size from less than 0.5 to 51.0 ha. Most contained large amounts of coarse woody debris within the littoral zone, thus making seining in shallow areas difficult. We sampled large lakes (>2 ha) using three fyke nets; small lakes (<2 ha) were sampled using two fyke nets. Fyke nets were set for 24 h. Large lakes were sampled with an average of 11 seine hauls/ lake and small lakes were sampled with an average of 3 seine hauls/lake, but exact shoreline seining effort varied among lakes depending on the amount of open shoreline. Fyke nets collected more fish and produced greater species richness and diversity measures than did seining. Species evenness was similar for the two gear types. Two species were unique to seine samples, whereas 13 species and 3 families were unique to fyke-net samples. Although fyke nets collected more fish and more species than did shoreline seines, neither gear collected all the species present in the littoral zone of floodplain lakes. These results confirm the need for a multiple-gear approach to fully characterize the littoral fish assemblages in floodplain lakes. ?? Copyright by the American Fisheries Society 2007.

Praktische Festigkeitsberechnungen im Maschinenbau

NASA Astrophysics Data System (ADS)

Böge, Gert; Böge, Wolfgang

Ziel aller Festigkeitsberechnungen ist die Ermittlung der vorhandenen Spannung und der Nachweis, dass ein konstruiertes Bauteil mit Sicherheit "hält". Seine geforderte oder erwartete Tragfähigkeit muss unter allen denkbaren Umständen gewährleistet sein, es darf z. B. auch bei Dauerbelastung in der vorgeschriebenen Lebensdauer nicht brechen oder seine Form bleibend so verändern, dass es seine Funktion nicht mehr ausreichend erfüllt.

Carbon fate in a large temperate human-impacted river system: Focus on benthic dynamics

NASA Astrophysics Data System (ADS)

Vilmin, Lauriane; Flipo, Nicolas; Escoffier, Nicolas; Rocher, Vincent; Groleau, Alexis

2016-07-01

Fluvial networks play an important role in regional and global carbon (C) budgets. The Seine River, from the Paris urban area to the entrance of its estuary (220 km), is studied here as an example of a large human-impacted river system subject to temperate climatic conditions. We assess organic C (OC) budgets upstream and downstream from one of the world's largest wastewater treatment plants and for different hydrological conditions using a hydrobiogeochemical model. The fine representation of sediment accumulation on the river bed allows for the quantification of pelagic and benthic effects on OC export toward the estuary and on river metabolism (i.e., net CO2 production). OC export is significantly affected by benthic dynamics during the driest periods, when 25% of the inputs to the system is transformed or stored in the sediment layer. Benthic processes also substantially affect river metabolism under any hydrological condition. On average, benthic respiration accounts for one third of the total river respiration along the studied stretch (0.27 out of 0.86 g C m-2 d-1). Even though the importance of benthic processes was already acknowledged by the scientific community for headwater streams, these results stress the major influence of benthic dynamics, and thus of physical processes such as sedimentation and resuspension, on C cycling in downstream river systems. It opens the door to new developments in the quantification of C emissions by global models, whereby biogeochemical processing and benthic dynamics should be taken into account.

Conditions for tidal bore formation in convergent alluvial estuaries

NASA Astrophysics Data System (ADS)

Bonneton, Philippe; Filippini, Andrea Gilberto; Arpaia, Luca; Bonneton, Natalie; Ricchiuto, Mario

2016-04-01

Over the last decade there has been an increasing interest in tidal bore dynamics. However most studies have been focused on small-scale bore processes. The present paper describes the first quantitative study, at the estuary scale, of the conditions for tidal bore formation in convergent alluvial estuaries. When freshwater discharge and large-scale spatial variations of the estuary water depth can be neglected, tide propagation in such estuaries is controlled by three main dimensionless parameters: the nonlinearity parameter ε0 , the convergence ratio δ0 and the friction parameter ϕ0. In this paper we explore this dimensionless parameter space, in terms of tidal bore occurrence, from a database of 21 estuaries (8 tidal-bore estuaries and 13 non tidal-bore estuaries). The field data point out that tidal bores occur for convergence ratios close to the critical convergence δc. A new proposed definition of the friction parameter highlights a clear separation on the parameter plane (ϕ0,ε0) between tidal-bore estuaries and non tidal-bore estuaries. More specifically, we have established that tidal bores occur in convergent estuaries when the nonlinearity parameter is greater than a critical value, εc , which is an increasing function of the friction parameter ϕ0. This result has been confirmed by numerical simulations of the two-dimensional Saint Venant equations. The real-estuary observations and the numerical simulations also show that, contrary to what is generally assumed, tide amplification is not a necessary condition for tidal bore formation. The effect of freshwater discharge on tidal bore occurrence has been analyzed from the database acquired during three long-term campaigns carried out on the Gironde/Garonne estuary. We have shown that in the upper estuary the tidal bore intensity is mainly governed by the local dimensionless tide amplitude ε. The bore intensity is an increasing function of ε and this relationship does not depend on freshwater discharge. However, freshwater discharge damps the tidal wave during its propagation and thus reduces ε and consequently limits the tidal bore development in the estuary. To take into account this process in the tidal-bore scaling analysis, it is necessary to introduce a fourth external parameter, the dimensionless river discharge Q0 .

The role of extreme floods in estuary-coastal behaviour: contrasts between river- and tide-dominated microtidal estuaries

NASA Astrophysics Data System (ADS)

Cooper, J. A. G.

2002-06-01

Contrasting modes of sedimentation and facies arrangement in tide- and river-dominated microtidal estuaries arise from the degree to which river or tidal discharge and sediment supply influences an estuary. A distinct facies gradation exists in tide-dominated systems from sandy, barrier/tidal delta-associated environments at the coast through deep mud-dominated middle reaches to fluvial sediment in the upper reaches. In river-dominated systems, fluvial sediment extends to the barrier and flood-tidal deltas are poorly developed or absent from the estuary. A number of independent observations during extreme floods on the South African coast indicate that these types of estuary respond differently to extreme river floods and that the mode of response corresponds to estuary type. Tide-dominated systems exhibit preferential erosion of noncohesive barrier and tidal delta sediments during river floods while the middle reaches remain little modified. River-dominated systems experience consistent erosion throughout their channel length during extreme floods. The increased cohesion of riverine sediments and stabilisation of bars by vegetation in river-dominated channels means that higher magnitude floods are necessary to effect significant morphological change. Barrier erosion, including the tidal delta, results in deposition of an ephemeral delta composed almost entirely of sands from these deposits in tide-dominated estuaries. In river-dominated systems, eroded channel sediments and material from the river catchment may augment barrier sediments in the ephemeral delta deposit. Post-flood, wave-reworking of ephemeral delta sediments acts to restore barriers to pre-flood morphology within a few years; however, in river-dominated systems, the additional sediment volume may produce significant coastal progradation that requires several years or decades to redistribute. These different modes of flood response mediated by the nature of the estuary have implications for coastal behaviour at the time scale of months to several decades. Estuary-coastal behaviour at river-dominated estuaries may be influenced for several decades by post-flood morphological adjustment. Tide-dominated estuaries, however, respond more rapidly in reworking flood-eroded sediment and are typically fully adjusted to modal wave and tidal conditions within a few months to a few years. In addition, the facies arrangement within the two estuary types renders tide-dominated estuaries more responsive to minor floods, while river-dominated estuaries, by virtue of more cohesive channel sediments, require greater discharges to effect significant morphological change.

Phytoplankton bloom dynamics in temperate, turbid, stressed estuaries: a model study

NASA Astrophysics Data System (ADS)

de Swart, Huib E.; Liu, Bo; de Jonge, Victor

2017-04-01

To gain insight into mechanisms underlying phytoplankton bloom dynamics in temperature, turbid estuaries, experiments were conducted with an idealised model that couples physical and biological processes. Results show that the model is capable of producing the main features of the observed blooms in the Ems estuary (Northwest Germany), viz. in the lower reach a spring bloom occur, which is followed by a secondary bloom in autumn. The along-estuary distribution of suspended sediment concentration (SSC) and the along-estuary distance between the nutrient source and the seaward bound of the turbidity zone control both the along-estuary locations and intensities of the blooms. Results of further sensitivity studies reveal that in a shallow, well-mixed estuary, under temporally-constant suspended sediment conditions, the seasonally-varying water temperature has larger impact on the timing of spring blooms than the seasonally-varying incident light intensity. The occurrence of the secondary bloom is caused by the fact that the growth rate of phytoplankton attains a maximum at an optimum water temperature. Bloom intensities are also modulated by the advective processes related to subtidal current because the latter regulates the seaward transport of nutrient from riverine source. Large-scale deepening of navigation channels leads to later spring blooms due to increased mixing depth. Finally, phytoplankton blooms are unlikely to occur in the upper reach due to the elevated SSC and the landward expansion of turbidity zone related to large-scale deepening.

The collapse of pelagic fishes in the upper San Francisco estuary

USGS Publications Warehouse

Sommer, T.; Armor, C.; Baxter, R.; Breuer, R.; Brown, L.; Chotkowski, M.; Culberson, S.; Feyrer, F.; Gingras, M.; Herbold, B.; Kimmerer, W.; Mueller-Solger, A.; Nobriga, M.; Souza, K.

2007-01-01

Although the pelagic fish community of the upper San Francisco Estuary historically has shown substantial variability, a recent collapse has captured the attention of resource managers, scientists, legislators, and the general public. The ecological and management consequences of the decline are most serious for delta smelt (Hypomesus transpacificus), a threatened species whose narrow range overlaps with large water diversions that supply water to over 25 million people. The decline occurred despite recent moderate hydrology, which typically results in at least modest recruitment, and investments of hundreds of millions of dollars in habitat restoration and environmental water allocations to support native fishes. In response to the pelagic fish collapse, an ambitious multi-agency research team has been working since 2005 to evaluate the causes of the decline, which likely include a combination of factors: stock-recruitment effects, a decline in habitat quality, increased mortality rates, and reduced food availability due to invasive species.

Stable lead isotopic analyses of historic and contemporary lead contamination of San Francisco Bay estuary

USGS Publications Warehouse

Ritson, P.I.; Bouse, R.M.; Flegal, A.R.; Luoma, S.N.

1999-01-01

Variations in stable lead isotopic composition (240Pb, 206Pb, 207Pb, 208Pb) in three sediment cores from the San Francisco Bay estuary document temporal changes in sources of lead during the past two centuries. Sediment, with lead from natural geologic sources, and relatively homogeneous lead isotopic compositions are overlain by sediments whose isotopic compositions indicate change in the sources of lead associated with anthropogenic modification of the estuary. The first perturbations of lead isotopic composition in the cores occur in the late 1800s concordant with the beginning of industrialization around the estuary. Large isotopic shifts, toward lower 206Pb/207Pb, occur after the turn of the century in both Richardson and San Pablo Bays. A similar relationship among lead isotopic compositions and lead concentrations in both Bays suggest contamination from the same source (a lead smelter). The uppermost sediments (post 1980) of all cores also have a relatively homogenous lead isotopic composition distinct from pre-anthropogenic and recent aerosol signatures. Lead isotopic compositions of leachates from fourteen surface sediments and five marsh samples from the estuary were also analyzed. These analyses suggest that the lead isotopic signature identified in the upper horizons of the cores is spatially homogeneous among recently deposited sediments throughout the estuary. Current aerosol lead isotopic compositions [Smith, D.R., Niemeyer, S., Flegal, A.R., 1992. Lead sources to California sea otters: industrial inputs circumvent natural lead biodepletion mechanisms. Environmental Research 57, 163-175] are distinct from the isotopic compositions of the surface sediments, suggesting that the major source of lead is cycling of historically contaminated sediments back through the water column. Both the upper core sediments and surface sediments apparently derive their lead predominantly from sources internal to the estuary. These results support the idea that geochemical cycling of lead between sediments and water accounts for persistently elevated lead concentrations in the water column despite 10-fold reduction of external source inputs to San Francisco Bay [Flegal, A.R., Rivera-Duarte, I., Ritson, P.I., Scelfo, G., Smith, G.J., Gordon, M., Sanudo-Wilhelmy, S.A., 1996. Metal contamination in San Francisco Waters: historic perturbations, contemporary concentrations, and future considerations in San Francisco Bay. In: Hollobaugh, J.T. (Ed.), The Ecosystem. AAAS, pp. 173-188].

Tidal influence on subtropical estuarine methane emissions

NASA Astrophysics Data System (ADS)

Sturm, Katrin; Grinham, Alistair; Werner, Ursula; Yuan, Zhiguo

2014-05-01

The relatively unstudied subtropical estuaries, particularly in the Southern Hemisphere, represent an important gap in our understanding of global greenhouse gas (GHG) emissions. These systems are likely to form an important component of GHG budgets as they occupy a relatively large surface area, over 38 000 km2 in Australia. Here, we present studies conducted in the Brisbane River estuary, a representative system within the subtropical region of Queensland, Australia. This is a highly modified system typical of 80% of Australia's estuaries. Generally, these systems have undergone channel deepening and straightening for safer shipping access and these modifications have resulted in large increases in tidal reach. The Brisbane River estuary's natural tidal reach was 16 km and this is now 85 km and tidal currents influence double the surface area (9 km2 to 18 km2) in this system. Field studies were undertaken to improve understanding of the driving factors behind methane water-air fluxes. Water-air fluxes in estuaries are usually calculated with the gas exchange coefficient (k) for currents and wind as well as the concentration difference across the water-air interface. Tidal studies in the lower and middle reaches of the estuary were performed to monitor the influence of the tidal stage (a proxy for kcurrent) on methane fluxes. Results for both investigated reaches showed significantly higher methane fluxes during the transition time of tides, the time of greatest tidal currents, than during slack tide periods. At these tidal transition times with highest methane chamber fluxes, lowest methane surface water concentrations were monitored. Modelled fluxes using only wind speed (kwind) were at least one order of magnitude lower than observed from floating chambers, demonstrating that current speed was likely the driving factor of water-air fluxes. An additional study was then conducted sampling the lower, middle and upper reaches during a tidal transition period. Although dissolved methane surface water concentrations were highest in the upper reaches of the estuary, experiencing the lowest tidal currents, fluxes measured using chambers were lower relative to middle and lower reaches. This supports the tidal study findings as higher tidal currents were experienced in the middle and lower reaches. The dominant driver behind estuarine methane water-air fluxes in this system was tidal current speed. Future studies need to take into account flux rates during both transition and slack tide periods to quantify total flux rates.

Seasonal Variation, Export Dynamics and Consumption of Freshwater Invertebrates in an Estuarine Environment

NASA Astrophysics Data System (ADS)

Williams, D. D.; Williams, N. E.

1998-03-01

In the Aber Estuary, North Wales, significant numbers of freshwater benthic invertebrates occurred in the tidal freshwater area. Distinct seasonal patterns were observed in their longitudinal zonation which appeared to be unrelated to variations in tidal inundation. The December extension downstream of freshwater taxa is hypothesized to be in response to decreasing water temperatures. In April, larvae/nymphs of the Trichoptera (caddisflies), Ephemeroptera (mayflies) and Plecoptera (stoneflies) ranged as far as a site inundated by 80·9% of all high tides, and larval Elmidae and Chironomidae (midges) occurred at the most marine site (inundated twice daily by all high tides). In July, with the exception of the Chironomidae, the range of most aquatic insects had contracted to the upper estuary. Although, in general, densities of aquatic insects decreased towards the lower estuary, significant densities persisted there. For example, maxima of 3514 chironomid larvae and 48 caddisfly larvae m -2were recorded at the 80·9% inundation site. An estimated 31×10 6freshwater invertebrates (weighing 62·6 kg), per annum, passed from fresh water into salt water across any given transect along the estuary. In comparison, the annual influx of invertebrates carried upstream by incoming tides was estimated to be 1·9×10 6(6·2%; weighing 2·5 kg). Predominant in the downstream drift were the larvae/nymphs and/or pupae of chironomids, mayflies, stoneflies and caddisflies. The ' reverse ' drift comprised mainly copepods, ostracods, amphipods and oligochaetes. Mites and the brackishwater amphipod Gammarus zaddachicommonly moved in both directions. Highest drift densities occurred in July, whereas the lowest densities occurred in late autumn and winter. Multiple regression analysis showed no relationship between total drift or ' reverse ' drift densities and any of the measured environmental variables. Many of the freshwater invertebrates appeared not to die upon passing into tidal sections but resumed a benthic existence by virtue of varying degrees of salt tolerance. Of the three fish species common in the estuary, eel, common goby and flounder, the last two preyed measurably on freshwater taxa. Whereas gobies tended to be opportunistic feeders, depending on the section of estuary that they occupied, flounder were more restricted to the upper estuary where they fed selectively on chironomid larvae. On the latter diet, between March and September, the mean wet weight of flounders increased by more than 100 times (from 5 to 540 mg). Gobies were more numerous in the estuary from September to February, and although they ate insects their primary prey was G. zaddachi.

The Seine Net--An Overlooked Environmental Testing Tool

ERIC Educational Resources Information Center

DuPont, Sidney I.

1977-01-01

Through seining individuals, families, camps, and schools can continuingly test the aquatic life just beyond the waterline. This article discusses the process of using a seine net and what can be found in the net. (NQ)

Ecology of selected marine communities in Glacier Bay: Zooplankton, forage fish, seabirds and marine mammals

USGS Publications Warehouse

Robards, Martin D.; Drew, Gary S.; Piatt, John F.; Anson, Jennifer Marie; Abookire, Alisa A.; Bodkin, James L.; Hooge, Philip N.; Speckman, Suzann G.

2003-01-01

We studied oceanography (including primary production), secondary production, small schooling fish (SSF), and marine bird and mammal predators in Glacier Bay during 1999 and 2000. Results from these field efforts were combined with a review of current literature relating to the Glacier Bay environment. Since the conceptual model developed by Hale and Wright (1979) ‘changes and cycles’ continue to be the underlying theme of the Glacier Bay ecosystem. We found marked seasonality in many of the parameters that we investigated over the two years of research, and here we provide a comprehensive description of the distribution and relative abundance of a wide array of marine biota. Glacier Bay is a tidally mixed estuary that leads into basins, which stratify in summer, with the upper arms behaving as traditional estuaries. The Bay is characterized by renewal and mixing events throughout the year, and markedly higher primary production than in many neighboring southeast Alaska fjords (Hooge and Hooge, 2002). Zooplankton diversity and abundance within the upper 50 meters of the water column in Glacier Bay is similar to communities seen throughout the Gulf of Alaska. Zooplankton in the lower regions of Glacier Bay peak in abundance in late May or early June, as observed at Auke Bay and in the Gulf of Alaska. The key distinction between the lower Bay and other estuaries in the Gulf of Alaska is that a second smaller peak in densities occurs in August. The upper Bay behaved uniformly in temporal trends, peaking in July. Densities had begun to decline in August, but were still more than twice those observed in that region in May. The highest density of zooplankton observed was 17,870 organisms/m3 in Tarr Inlet during July. Trends in zooplankton community abundance and diversity within the lower Bay were distinct from upper-Glacier Bay trends. Whereas the lower Bay is strongly influenced by Gulf of Alaska processes, local processes are the strongest influence in the upper-Bay.We identified 55 species of fish during this study (1999 and 2000) from beach seines, mid-water trawls, and rod and line catches. The diversity of physical, oceanographic, and glacial chronological conditions within Glacier Bay contribute a suite of factors that influence the distribution and abundance of fish. Accordingly, we observed significant differences in the abundance and distribution of fish within the Bay. Most significantly, abundance and diversity (primarily juvenile fish including walleye Pollock, eelblennies, and capelin) were greatest at the head of both the east and west arms where zooplankton abundance was greatest – in close proximity to tidewater glaciers and freshwater runoff. All of Glacier Bay and Icy Strait were surveyed hydroacoustically for plankton and fish during June 1999 surveys. Acoustically determined forage biomass was concentrated in relatively few important areas such as Pt. Adolphus, Berg Bay, on the Geikie-Scidmore shelf, around the Beardslee/Marble islands, and the upper arms of Glacier Bay. Forage biomass (primarily small schooling fish and euphausiids) was concentrated in shallow, nearshore waters; 50 % of acoustic biomass was found at depths < 35m, 80 % of biomass at depths < 80m. During our sampling, high density patches of prey were very rare, and less than 8 % of the area surveyed in Glacier Bay contained patch densities suitable (e.g., > 0.01 fish/m3) for seabirds foraging on zooplankton and small schooling fish. Less than 1 % of the area contained patches suitable (e.g., >0.1 fish/m3) for whales foraging on zooplankton and small schooling fish. High-density aggregations of 0.1-10 fish/m3 were comprised mostly of schools containing capelin, pollock, herring or euphausiids (0.1-1 kg/m3).During predator surveys (1999-2000), we observed 63 species of birds and 7 species of marine mammals. Seasonal distribution and abundance of these “apex” predators was highly variable by species. Glacier Bay supports high numbers of seabirds and marine mammals that consume zooplankton and small schooling fish. Nearshore areas had higher densities of both birds and marine mammals. Several areas, such as Pt. Adolphus, Berg Bay, on the Geikie-Scidmore shelf, the Beardslee/Marble islands, and the upper arms of Glacier Bay were focal points of small schooling fish and zooplankton consuming marine birds and mammals. Comparisons between surveys and a prior study (1991) suggested that the assemblage of birds and marine mammals in the Bay is undergoing change. Most notable was a clear decline in Brachyramphus spp. murrelets while other apex species are increasing or remaining stable.It should be noted that many of the birds and mammals observed during this project, e.g. mergansers, do not forage on zooplankton and small schooling fish; rather they forage on benthic fish and sessile invertebrates. While distribution and sampling data for these marine predator species are valid, this study did not sample benthic fish and sessile invertebrates. Thus, recommendations made by this project should be interpreted as generally specific to the zooplankton/small schooling fish marine food web components of the Glacier Bay Ecosystem.

Les traces du "recyclage" dans des cahiers d'eleves de Seine-et-Marne et des Hauts-de-Seine (Impact of Teachers' Inservice Training on the Work of Students from the Seine-et-Marne and the Hauts-de-Seine Districts).

ERIC Educational Resources Information Center

Aguttes, Pierrette; Le Goff, Josiane

1980-01-01

Reports the results of an investigation on institutes for elementary school teachers inservice training, based on questionnaires directed to the trainees and the educators, and on an analysis of students' work. Focuses on various aspects of French language teaching and especially on grammar and vocabulary exercises. (MES)

A rapid method for assessing the accumulation of microplastics in the sea surface microlayer (SML) of estuarine systems.

PubMed

Anderson, Zachary T; Cundy, Andrew B; Croudace, Ian W; Warwick, Phillip E; Celis-Hernandez, Omar; Stead, Jessica L

2018-06-21

Microplastics are an increasingly important contaminant in the marine environment. Depending on their composition and degree of biofouling, many common microplastics are less dense than seawater and so tend to float at or near the ocean surface. As such, they may exhibit high concentrations in the sea surface microlayer (SML - the upper 1-1000 μm of the ocean) relative to deeper water. This paper examines the accumulation of microplastics, in particular microfibres, in the SML in two contrasting estuarine systems - the Hamble estuary and the Beaulieu estuary, southern U.K., via a novel and rapid SML-selective sampling method using a dipped glass plate. Microplastic concentrations (for identified fibres, of 0.05 to 4.5 mm length) were highest in the SML-selective samples (with a mean concentration of 43 ± 36 fibres/L), compared to <5 fibres/L for surface and sub-surface bulk water samples. Data collected show the usefulness of the dipped glass plate method as a rapid and inexpensive tool for sampling SML-associated microplastics in estuaries, and indicate that microplastics preferentially accumulate at the SML in estuarine conditions (providing a potential transfer mechanism for incorporation into upper intertidal sinks). Fibres are present (and readily sampled) in both developed and more pristine estuarine systems.

Bayesian change point analysis of abundance trends for pelagic fishes in the upper San Francisco Estuary.

PubMed

Thomson, James R; Kimmerer, Wim J; Brown, Larry R; Newman, Ken B; Mac Nally, Ralph; Bennett, William A; Feyrer, Frederick; Fleishman, Erica

2010-07-01

We examined trends in abundance of four pelagic fish species (delta smelt, longfin smelt, striped bass, and threadfin shad) in the upper San Francisco Estuary, California, USA, over 40 years using Bayesian change point models. Change point models identify times of abrupt or unusual changes in absolute abundance (step changes) or in rates of change in abundance (trend changes). We coupled Bayesian model selection with linear regression splines to identify biotic or abiotic covariates with the strongest associations with abundances of each species. We then refitted change point models conditional on the selected covariates to explore whether those covariates could explain statistical trends or change points in species abundances. We also fitted a multispecies change point model that identified change points common to all species. All models included hierarchical structures to model data uncertainties, including observation errors and missing covariate values. There were step declines in abundances of all four species in the early 2000s, with a likely common decline in 2002. Abiotic variables, including water clarity, position of the 2 per thousand isohaline (X2), and the volume of freshwater exported from the estuary, explained some variation in species' abundances over the time series, but no selected covariates could explain statistically the post-2000 change points for any species.

Influence of Environmental Variables on the Distribution of Macrobenthos in the Han River Estuary, Korea

NASA Astrophysics Data System (ADS)

Yu, Ok Hwan; Lee, Hyung-Gon; Lee, Jae-Hac

2012-12-01

We compared environmental effects on the macrobenthic community of the Han River Estuary in summer, when freshwater input from the Han River increased, and in spring, when freshwater input decreased. Field samples were taken from the upper region of the Shingok reservoir to the southern area of Ganghwado at 18 sampling sites after rainy (August 2006) and dry (March 2007) seasons. Macrobenthic fauna were collected using a Van Veen Grab (0.025 m2 and 0.1 m2) and environmental factors were measured simultaneously. Dominant species of macrobenthic fauna and the macrobenthic community were divided into two areas, the area of the Han River with no salinity (< 0.1 psu) and the southern part of Ganghwado with salinity (> 20 psu). The dominant species Byblis japonicus appeared at Junruri in the dry season. The distributions of two polychaetes, Hediste japonica and Nephtys caeca, were divided into the lower and upper areas of the Singok submerged weir. BIO-ENV (the matching of biotic to environmental patterns) analysis revealed that salinity was the most important factor affecting macrobenthic communities in the Han River Estuary, with other factors such as sediment grain size, bottom dissolved oxygen, and total organic carbon of sediment being secondary.

Long-term Records of Trace Metal Elements in Core Sediments: Anthropogenic Impacts in The Eure River Watershed

NASA Astrophysics Data System (ADS)

Gardes, T.; Debret, M.; Copard, Y.; Patault, E.; Deloffre, J.; Marcotte, S.; Develle, A. L.; Sabatier, P.; Chaumillon, E.; Coulombier, T.; Revillon, S.; Nizou, J.; Laberdesque, Y.; Koltalo, F.

2017-12-01

The Martot Dam is located in the Eure River Watershed (Normandy, France), few hundred meters upstream the Eure-Seine Rivers confluence. In the context of the European Water Framework Directive (2000/60/EC), the French Authorities planned to remove this dam in 2017. Nevertheless, impacts of the removal remain poorly studied. Classically, dam blocked sedimentary transfers downstream, but here, sediments are not blocked behind the dam but stored three hundred meters upstream in a hydraulic annex, called the Martot Pond. Furthermore, this pond is submitted to the tidal flow from the Seine Estuary despite the Martot Dam. The aim of the study is to evaluate the dam removal impacts on sedimentary transfers and re-suspension of contaminated sediments stored in the Martot Pond and the Eure River's channel. Concerning past transfers and sediments accumulation in the Eure River Watershed, sedimentary archives have been cored, before dam removal, at the Martot Pond and the Les Damps Pond (located 10km upstream the latter). Dating of sedimentary cores for both ponds indicates a sedimentation rate around 1 cm y-1. Trace metal elements quantification showed a wide metallic contamination with highest concentrations evidenced during the 1950-1960's (As: 13-22 mg kg-1; Cd: 40-55 mg kg-1; Cr: 170-210 mg kg-1; Cu: 400-490 mg kg-1; Hg: 2.3 mg kg-1; Mn: 1,280-2,200 mg kg-1; Ni: 64-75 mg kg-1; Zn: 905-990 mg kg-1) and the 1990-2000's (Cr: 95-215 mg kg-1; Ni: 100 mg kg-1; Pb: 670-855 mg kg-1). These variations of concentrations along cores can be associated with industrial past of the Eure River Watershed and sources of contamination can be identified. Thereby, Zn, Ni or Hg contamination could be associated with wastes of battery factory released in the Eure River during the economic recovery, while Pb contamination is linked to the activities of a cathode-ray tubes factory. Metals quantification in core materials highlighted anthropogenic impacts in the Eure River Watershed. These contaminated sediments could be re-suspended and transferred to the Seine River in case of remobilization in Martot Pond and the Eure River's channel after dam removal.

Physical, chemical, and biological aspects of the Duwamish River Estuary, King County, Washington, 1963-67

USGS Publications Warehouse

Santos, John F.; Stoner, J.D.

1972-01-01

This report describes the significant results to 1967 of a comprehensive study that began in 1963 to evaluate what changes take place in an estuary as the loads .of raw and partially treated industrial and municipal wastes are replaced by effluent from a secondary treatment plant. The study area is the Duwamish River estuary, about 18.3 river kilometers long. At mean sea level the estuary has a water-surface area of about 1 square mile and a mean width of 440 feet. At the lowest and highest recorded tides, the volume of the estuary is about 205 and 592 million cubic feet, respectively. The estuary is well stratified (salt-wedge type) at fresh-water inflows greater than 1,000 cfs (cubic feet per second), but when inflow rates are less than 1,000 cfs the lower 5.6 kilometers of the estuary grades into the partly mixed type. The crosschannel salinity distribution is uniform for a given location and depth. Salinity migration is controlled by tides and fresh-water inflow. At fresh-water inflow rates greater than 1,000 cfs, water in the upper 8.4 kilometers of the estuary is always fresh regardless of tide. At inflow rates less than 600 cfs and tide heights greater than 10 feet; some salinity has been detected 16.1 kilometers above the mouth of the estuary. Studies using a fluorescent dye show that virtually no downward mixing into the salt wedge occurs; soluble pollutants introduced at the upper end of the estuary stay in the surface layer (5-15 ft thick). On the basis of dye studies when fresh-water inflow is less than 400 cfs, it is estimated that less than 10 percent of a pollutant will remain in the estuary a minimum of 7 days. Longitudinal dispersion coefficients for the surface layer have been determined to be on the order of 100-400 square feet per second. Four water-quality stations automatically monitor DO (dissolved oxygen), water temperature, pH, and specific conductance; at one station solar radiation also is measured. DO concentration in the surface layer decreases almost linearly in a downstream direction. Minimum DO concentration in the surface layer is usually greater than 4 rag/1 (milligrams per liter). The smallest DO values are consistently recorded in the bottom layer at the station 7.7 kilometers above the mouth; monthly means of less than 3 mg/1 of DO have occurred at this point. Manual sampling shows that the DO sag in the bottom layer oscillates between 7.7 and 10.4 kilometers above the mouth of the estuary. Multiple-regression analysis shows that the surface DO content can be estimated from the fresh-water inflow and water temperature. Tidal exchange and fresh-water inflow indirectly control the bottom DO content. Information available from previous studies failed to indicate a progressive decrease in DO content during the period 1949-56, but data from the present study suggest a slight general decrease in the annual minimum DO concentrations in both the upper and lower layers. Average nitrate concentration in fresh water at station 16.2 has increased progressively since 1964, by amounts greater than those which can be attributed to the Renton Treatment Plant, 4.3 kilometers upstream from station 16.2. The BOD (biochemical oxygen demand) in both surface and bottom layers is generally less than 4 rag/1 of oxygen, but values greater than 6 rag/1 have been measured during a period of phytoplankton bloom. Phytoplankton blooms can occur during periods of minimum tidal exchange and fresh-water inflows of less than 300 cfs if solar radiation and water temperature are optimum. Nutrients (nitrogen and phosphorus compounds) do not control the occurrence of a bloom, because sufficient quantities of these nutrients are always present. Nutrients in the treated effluent may increase the biomass of the bloom. Trace-element studies have not defined any role that these elements may play in algal growth. The inflowing fresh water contains principally calcium and bicarbonate and has a dissolved-solids content ra

Evaluation of FAD-associated purse seine fishery reduction strategies for bigeye tuna ( Thunnus obesus) in the Indian Ocean

NASA Astrophysics Data System (ADS)

Tong, Yuhe; Chen, Xinjun; Xu, Liuxiong; Chen, Yong

2013-07-01

In the Indian Ocean, bigeye tuna supports one of the most important fisheries in the world. This fishery mainly consists of two components: longline and purse seine fisheries. Evidence of overfishing and stock depletion of bigeye tuna calls for an evaluation of alternative management strategies. Using an age-structured operating model, parameterized with the results derived in a recent stock assessment, we evaluated the effectiveness of applying constant fishing mortality (CF) and quasi-constant fishing mortality (QCF) strategies to reduce fishing effort of purse seining with fish aggregating devices (FADs) at different rates. Three different levels of productivity accounted for the uncertainty in our understanding of stock productivity. The study shows that the results of CF and QCF are similar. Average SSB and catch during simulation years would be higher if fishing mortality of FAD-associated purse seining was reduced rapidly. The banning or rapid reduction of purse seining with FAD resulted in a mean catch, and catch in the last simulation year, higher than that of the base case in which no change was made to the purse seine fishery. This could be caused by growth overfishing by purse seine fisheries with FADs according to the per-recruit analysis. These differences would be more obvious when stock productivity was low. Transferring efforts of FAD-associated purse seining to longline fisheries is also not feasible. Our study suggests that changes are necessary to improve the performance of the current management strategy.

Earth Observations

NASA Image and Video Library

2011-06-02

ISS028-E-006687 (2 June 2011) --- Estuaries on the northwestern coast of Madagascar are featured in this image photographed by an Expedition 28 crew member on the International Space Station. Regions where fresh water flowing in rivers and salt water from the seas and oceans mix are called estuaries, and they are among the most biologically productive ecosystems on Earth. This photograph highlights two estuaries located along the northwestern coastline of the island of Madagascar. The Mozambique Channel (top) separates Madagascar from the southeastern coast of Africa. Bombetoka Bay (upper left) is fed by the Betsiboka River and is a frequent subject of astronaut photography due to its striking red floodplain sediments. Mahajamba Bay (right) is fed by several rivers including the Mahajamba and Sofia Rivers; like the Betsiboka, the floodplains of these rivers also contain reddish sediments eroded from their basins upstream. The brackish (mix of fresh and salty water) conditions found in most estuaries host unique plant and animal species adapted to live in such environments. Mangroves in particular are a common plant species found in and around Madagascar estuaries, and Bombetoka Bay contains some of the largest remaining stands. Estuaries also host abundant fish and shellfish species ? many of which need access to freshwater for a portion of their life cycles ? and these in turn support local and migratory bird species that prey on them. However, human activities such as urban development, overfishing, and increased sediment loading from erosion of upriver highlands threaten the ecosystem health of the estuaries. In particular, the silt deposits in Bombetoka Bay at the mouth of the Betsiboka River have been filling in the bay.

Processing watershed-derived nitrogen in a well-flushed New England estuary

USGS Publications Warehouse

Tobias, C.R.; Cieri, M.; Peterson, B.J.; Deegan, Linda A.; Vallino, J.; Hughes, J.

2003-01-01

Isotopically labeled nitrate (15NO3-) was added continuously to the Rowley estuary, Massachusetts, for 22 d to assess the transport, uptake, and cycling of terrestrially derived nitrogen during a period of high river discharge and low phytoplankton activity. Isotopic enrichment of the 3.5-km tidal prism (150,000 m3) was achieved for the 3 weeks and allowed us to construct a nitrogen mass balance model for the upper estuary. Mean ??15NO3- in the estuary ranged from 300??? to 600???, and approximately 75%-80% of the 15N was exported conservatively as 15NO 3- to the coastal ocean. Essentially all of the 20%-25% of the 15N processed in the estuary occurred in the benthos and was evenly split between direct denitrification and autotrophic assimilation. The lack of water-column 15N uptake was attributed to low phytoplankton stocks and short water residence times (1.2-1.4 d). Uptake of water-column NO3- by benthic autotrophs (enriched in excess of 100???) was a function of NO3- concentration and satisfied up to 15% and 25% of the total nitrogen demand for benthic microalgae and macroalgae, respectively. Approximately 10% of tracer assimilated by benthic autotrophs was mineralized and released back to the water column as 15NH4+. By the end of the study, 15N storage in sediments and marsh macrophytes accounted for 50%-70% of the 15N assimilated in the estuary. These compartments may sequester watershed-derived nitrogen in the estuary for time scales of months to years.

50 CFR 300.223 - Purse seine fishing restrictions.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 50 Wildlife and Fisheries 11 2013-10-01 2013-10-01 false Purse seine fishing restrictions. 300.223 Section 300.223 Wildlife and Fisheries INTERNATIONAL FISHING AND RELATED ACTIVITIES INTERNATIONAL... seine fishing restrictions. None of the requirements of this section apply in the territorial seas or...

Sedimentary Records of Hyperpycnal Flows and the Influence of River Damming on Sediment Dynamics of Estuaries: Examples from the Nelson, Churchill, Moisie and Sainte-Marguerite Rivers (Canada)

NASA Astrophysics Data System (ADS)

St-Onge, G.; Duboc, Q.; Boyer-Villemaire, U.; Lajeunesse, P.; Bernatchez, P.

2015-12-01

Sediment cores were sampled in the estuary of the Nelson and Churchill Rivers in western Hudson Bay, as well as in the estuary of the Moisie and Sainte-Marguerite Rivers in Gulf of St. Lawrence in order to evaluate the impact of hydroelectric dams on the sedimentary regime of these estuaries. The gravity cores at the mouth of the Nelson River recorded several cm-thick rapidly deposited layers with a reverse to normal grading sequence, indicating the occurrence of hyperpycnal flows generated by major floods during the last few centuries. These hyperpycnal flows were probably caused by ice-jam formation, which can increase both the flow and the sediment concentration following the breaching of such natural dams. Following the construction of hydroelectric dams since the 1960s, the regulation of river discharge prevented the formation of hyperpycnal flows, and hence the deposition of hyperpycnites in the upper part of the cores. In the core sampled in the estuary of the Churchill River, only one hyperpycnite was recorded. This lower frequency may be due to the enclosed estuary of the Churchill River, its weaker discharge and the more distal location of the coring site.In the Gulf of St. Lawrence, grain size measurements allowed the identification of a major flood around AD 1844±4 years in box cores from both the Sainte-Marguerite and Moisie Rivers, whereas a drastic decrease in variations in the median grain size occurred around AD ~1900 in the estuary of the Sainte-Marguerite River, highlighting the offshore impact of the SM1 dam construction in the early 1900s. Furthermore, sedimentological variations in the box cores from both estuaries have been investigated by wavelet analysis and the sharp disappearance of high frequencies around AD 1900 in the estuary of the dammed river (Sainte-Marguerite River), but not in the estuary of the natural river (Moisie River), also provides evidence of the influence of dams on the sedimentary regime of estuaries.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fryer, John L.

The Department of Microbiology at Oregon State University with funding from the Bonneville Power Administration conducted a study relating to the epidemiology and control of three fish diseases of salmonids in the Columbia River Basin. These three diseases were ceratomyxosis which is caused by the myxosporidan parasite Ceratomyxa shasta, bacterial kidney disease, the etiological agent of which is Renibacterium salmoninarum, and infectious hematopoietic necrosis, which is caused by a rhabdovirus. Each of these diseases is highly destructive and difficult or impossible to treat with antimicrobial agents. The presence of ceratomyxosis in rainbow trout exposed at McNary and Little Goose Damsmore » extends the range of this disease about 200 miles further up the Columbia River and into the Snake River drainage. Wallowa steelhead trout were less resistant to this disease than other upriver stocks tested. Juvenile salmonids entering the Columbia River estuary were collected periodically between May to September, 1983. Nine percent of the beach seined chinook salmon and 5, 11 and 12%, respectively, of the purse seined coho and chinook salmon and steelhead trout were infected with Ceratomyxa shasta. Experiments indicated ceratomyxosis progresses in salt water at the same rate as in fresh water once the fish have become infected. These data indicate a longer exposure to infective stages of C. shasta than previously identified and that approximately 10% of the migrating salmonids are infected and will probably die from this organism after entering salt water. Since sampling began in 1981 the bacterial kidney disease organism, Renibacterium salmoninarum, has been detected by the fluorescent antibody test in seven salmonid species caught in the open ocean off the coasts of Washington and Oregon. The bacterium has been found primarily in chinook salmon (11%) with lesions in 2.5% of these fish. This disease was also detected at levels ranging from 17% in coho salmon to 25% in chinook salmon seined from the Columbia River just before entering the estuary. Interpretation of these numbers suggests an even greater economic impact on Columbia River salmonid stocks than that proposed for C. shasta. Fertilized eggs from bacterial kidney disease infected parents examined after one month of incubation revealed the presence of bacteria with identical morphology to R. salmoninarum on or in the egg wall further reinforcing the proposed vertical transmission of this disease organism. Infectious hematopoietic necrosis virus was recovered at the 67% level from seeded water samples supplemented with 1% fetal calf serum. Virus injected into unfertilized eggs survived for over two weeks; in eyed eggs the virus also replicated. Epizootics caused by IHNV occurred in two of the 8 separate groups of steelhead trout fingerlings held in LJV treated water at Round Butte Hatchery. Comparing these results to those in the vertical transmission experiment where none of the groups developed IHNV suggests that vertical transmission of IHNV, if it occurs, is a very infrequent or random event. On three occasions IHNV was detected in ovarian fluid samples after storage for 6--9 days at 4 C. No virus had been detected in these samples at spawning. This suggests the presence of an interfering substance, perhaps anti-IHNV antibody in ovarian fluid. This observation raises the possibility that IHNV is much more widespread throughout Columbia River Basin salmonid stocks than previously believed.« less

Major factors influencing the elemental composition of surface estuarine sediments: the case of 15 estuaries in Portugal.

PubMed

Mil-Homens, M; Vale, C; Raimundo, J; Pereira, P; Brito, P; Caetano, M

2014-07-15

Upper sediments (0-5 cm) were sampled in 94 sites of water bodies of the fifteen Portuguese estuaries characterized by distinct settings of climate, topography and lithology, and marked by diverse anthropogenic pressures. Confined areas recognized as highly anthropogenic impacted, as well as areas dominated by erosion or frequently dredged were not sampled. Grain size, organic carbon (Corg), Al and trace elements (As, Cd, Co, Cr, Cu, Hg, Ni, Pb and Zn) were determined. Normalisation of trace element concentrations to Al and Corg, correlations between elements and Principal Component Analysis (PCA) allowed identifying elemental associations and the relevance of grain-size, lithology and anthropogenic inputs on sediment chemical composition. Whereas grain-size is the dominant effect for the majority of the studied estuaries, the southern estuaries Mira, Arade and Guadiana are dominated by specific lithologies of their river basins, and anthropogenic effects are identified in Ave, Leça, Tagus and Sado. This study emphasizes how baseline values of trace elements in sediments may vary within and among estuarine systems. Copyright © 2014 Elsevier Ltd. All rights reserved.

Effect of outflow on spring and summertime distribution and abundance of larval and juvenile fishes in the upper San Francisco Estuary

USGS Publications Warehouse

Dege, M.; Brown, L.R.

2004-01-01

We analyzed data on spring and summertime larval and juvenile fish distribution and abundance in the upper San Francisco Estuary (SFE), California between 1995 and 2001. The upper SFE includes the tidal freshwater areas of the Sacramento-San Joaquin Delta downstream to the euryhaline environment of San Pablo Bay. The sampling period included years with a variety of outflow conditions. Fifty taxa were collected using a larval tow net. Two common native species, delta smelt Hypomesus transpacifucus and longfin smelt Spirinchus thaleichthys, and four common alien taxa, striped bass Morone saxatilis, threadfin shad Dorosoma petenense, gobies of the genus Tridentiger, and yellowfin goby Acanthogobins flavimanus, were selected for detailed analysis. Outflow conditions had a strong influence on the geographic distribution of most of the species, but distribution with respect to the 2 psu isohaline (X2) was not affected. The distribution patterns of delta smelt, longfin smelt, and striped bass were consistent with larvae moving from upstream freshwater spawning areas to down-stream estuarine rearing areas. There were no obvious relationships of outflow with annual abundance indices. Our results support the idea of using X2 as an organizing principle in understanding the ecology of larval fishes in the upper SFE. Additional years of sampling will likely lead to additional insights into the early life history of upper SFE fishes. ?? Copyright by the American Fisheries Society 2004.

76 FR 19028 - Western Pacific Pelagic Fisheries; Purse Seine Prohibited Areas Around American Samoa

Federal Register 2010, 2011, 2012, 2013, 2014

2011-04-06

... announces that the Western Pacific Fishery Management Council (Council) proposes to amend the Fishery... catch competition between purse seine vessels and local trolling and longline fleets due to possible... fleet and domestic purse seine vessels. DATES: Comments on Amendment 3, including an environmental...

Nutrient elements in large Chinese estuaries

NASA Astrophysics Data System (ADS)

Zhang, Jing

1996-07-01

Based on comprehensive observations since 1983, this study summarizes major features of nutrient elements (nitrogen, phosphorus and silicon) in large Chinese river/estuary systems. Elevated nutrient element levels were observed in Chinese rivers, when compared to large and less disturbed aquatic systems (e.g. the Amazon, Zaire and Orinoco). Data from this study are similar to those obtained from the polluted and/or eutrophic rivers in Europe and North America (e.g. the Rhóne and Loire). Nutrient elements may have either conservative or active distributions, or both, in the mixing zone, depending on the element and the estuary. For example, non-conservative behaviors were observed in the upper estuary, where nutrient elements may be remobilized due to the strong desorption and variations of the fresh water end-member, but conservative distributions were found afterwards in the lower estuary. Outside the riverine effluent plumes, nutrient elements may be depleted in surface waters relative to elevated bioproduction, whereas the regeneration with respect to decomposition of organic material and/or nitrification/denitrification offshore, may sustain high levels of nutrient elements in near-bottom waters. Laboratory experiment data generally compares well with field observations. The high fluxes and area] yields of nutrient elements from large Chinese rivers, indicate the extensive use of chemical fertilizers and domestic waste drainage over watersheds in China.

Sources and transformations of anthropogenic nitrogen along an urban river-estuarine continuum

NASA Astrophysics Data System (ADS)

Pennino, Michael J.; Kaushal, Sujay S.; Murthy, Sudhir N.; Blomquist, Joel D.; Cornwell, Jeff C.; Harris, Lora A.

2016-11-01

Urbanization has altered the fate and transport of anthropogenic nitrogen (N) in rivers and estuaries globally. This study evaluates the capacity of an urbanizing river-estuarine continuum to transform N inputs from the world's largest advanced (e.g., phosphorus and biological N removal) wastewater treatment facility. Effluent samples and surface water were collected monthly along the Potomac River estuary from Washington D.C. to the Chesapeake Bay over a distance of 150 km. In conjunction with box model mass balances, nitrate stable isotopes and mixing models were used to trace the fate of urban wastewater nitrate. Nitrate concentrations and δ15N-NO3- values were higher down-estuary from the Blue Plains wastewater outfall in Washington D.C. (2.25 ± 0.62 mg L-1 and 25.7 ± 2.9 ‰, respectively) compared to upper-estuary concentrations (1.0 ± 0.2 mg L-1 and 9.3 ± 1.4 ‰, respectively). Nitrate concentration then decreased rapidly within 30 km down-estuary (to 0.8 ± 0.2 mg L-1), corresponding to an increase in organic nitrogen and dissolved organic carbon, suggesting biotic uptake and organic transformation. TN loads declined down-estuary (from an annual average of 48 000 ± 5000 kg day-1 at the sewage treatment plant outfall to 23 000 ± 13 000 kg day-1 at the estuary mouth), with the greatest percentage decrease during summer and fall. Annually, there was a 70 ± 31 % loss in wastewater NO3- along the estuary, and 28 ± 6 % of urban wastewater TN inputs were exported to the Chesapeake Bay, with the greatest contribution of wastewater TN loads during the spring. Our results suggest that biological transformations along the urban river-estuary continuum can significantly transform wastewater N inputs from major cities globally, and more work is necessary to evaluate the potential of organic nitrogen and carbon to contribute to eutrophication and hypoxia.

Nekton use of intertidal creek edges in low salinity salt marshes of the Yangtze River estuary along a stream-order gradient

NASA Astrophysics Data System (ADS)

Jin, Binsong; Qin, Haiming; Xu, Wang; Wu, Jihua; Zhong, Junsheng; Lei, Guangchun; Chen, Jiakuan; Fu, Cuizhang

2010-07-01

Non-vegetated creek edges were investigated to explore spatial nekton use patterns in a low salinity intertidal salt marsh creek network of the Yangtze River estuary along a stream-order gradient with four creek orders. Non-vegetated creek edges were arbitrarily defined as the approximately 3 m extending from the creek bank (the marsh-creek interface) into open water. Nekton was sampled using seine nets during daytime high slack water during spring tides for two or three days each in May through July 2008. Twenty-three nekton species (16 fishes and 7 crustaceans) were caught during the study. Fishes were dominated by gobies ( Mugilogobius abei, Periophthalmus magnuspinnatus, Periophthalmus modestus, Synechogobius ommaturus), mullets ( Chelon haematocheilus, Liza affinis) and Chinese sea bass ( Lateolabrax maculatus). Crustaceans were dominated by mud crab ( Helice tientsinensis) and white prawn ( Exopalaemon carinicauda). Rank abundance curves revealed higher evenness of nekton assemblages in lower-order creeks compared to higher-order creeks. Fish abundance tended to increase with increasing creek order. Crustacean abundance was higher in the first-third order creeks than in the fourth-order creek. Dominant nekton species displayed various trends in abundance and length-frequency distributions along the stream-order gradient. The spatial separation of nekton assemblages between the first-third order creeks and the fourth-order creek could be attributed to geomorphological factors (distance to mouth and cross-sectional area). These findings indicate that both lower- and higher-order creek edges play important yet different roles for nekton species and life history stages in salt marshes.

Spatial and Temporal Comparison of DNRA Communities in New River Estuary, USA

NASA Astrophysics Data System (ADS)

Song, B.; Lisa, J.; Tobias, C. R.

2016-02-01

Dissimilatory nitrate reduction to ammonium (DNRA) is an important nitrate respiring pathway, competing with denitrification, in various ecosystems. Studies examining the diversity and composition of DNRA communities are limited and their link to DNRA activity is unknown. We conducted a multidisciplinary investigation of sediment communities in the upper reaches of a eutrophic estuary to examine spatial and temporal variation of DNRA community structures and determine their linkage to activities. Sediment samples were collected seasonally from two study sites (AA2 and JAX) in the New River Estuary, North Carolina, USA. 15N-nitrate tracer experiments were conducted to measure potential DNRA rates while abundance of DNRA communities was measured using quantitative PCR of cytochrome C nitrite reductase genes (nrfA). Composition and diversity of DNRA communities were also examined based on next generation sequencing (NGS) of nrfA genes using an Ion Torrent PGM. Bioinformatic analysis was conducted using the FunGene pipeline and Mothur program. Higher DNRA activities were measured at JAX and associated with higher abundance of nrfA genes. Seasonal variation in DNRA rates and nrfA gene abundance was more evident at JAX than AA2. Nitrate concentration and dissolved oxygen in bottom water were significantly and positively correlated with activities and abundance of DNRA communities. The nrfA NGS analysis revealed that spatial variation of DNRA communities was much greater than temporal variation with salinity, dissolved organic carbon, and nitrate as the most important environmental variables affecting these communities. Diversity of DNRA communities was negative correlated with the DNRA rates and nrfA gene abundance, which suggests that dominant members of the DNRA community are responsible for higher rates. Thus, our multidisciplinary study clearly demonstrates the linkage between structure and activities of DNRA communities in the upper reaches of New River Estuary.

Resource use of an aquacultured shellfish in the reverse estuary Bahía San Quintín, Baja California, México

NASA Astrophysics Data System (ADS)

Wilkinson, G. M.; Emery, K.; Camacho-Ibar, V.; Pace, M.; McGlathery, K.; Sandoval Gil, J.; Hernandez-Lopez, J.

2016-02-01

Shellfish aquaculture is prominent in many coastal and estuarine environments. Filter feeding by cultured shellfish connects the benthic and pelagic environments in coastal ecosystems. Bahía San Quintín is a reverse estuary in Baja California, Mexico, where Pacific oysters (Crassostrea gigas) are cultivated. While oysters likely feed heavily on phytoplankton especially during upwelling periods, we hypothesized that other forms of organic matter available in high quantities such as seagrass (Zostera marina) and macroalgae (Ulva spp.) must also be used by the oysters, especially in the most inshore portions of the bay. We measured the carbon and hydrogen stable isotope composition of oysters and their potential food resources at upper, mid, and lower bay sites during upwelling and non-upwelling seasons and applied a Bayesian mixing model to evaluate resource use. Hydrogen isotopes provided a large separation between potential food resources. Although we did not find any strong seasonal effects due to upwelling, there was a strong spatial gradient in resource use. Phytoplankton were most important at the lower (oceanic) site (median resource use for two sampling times, 68 and 79 %) and decreased up the estuary as macroalgae became more important (43 and 56 % at the upper site). At all sites for both sampling times, seagrass was an unimportant resource for oysters. The contrast between high phytoplankton use at the lower site and increased macroalgal use at the upper site is likely due to available resource biomass. Our results illustrate the adaptability of oysters to varying resource availability and the possibility of a higher system carrying capacity than that based on phytoplankton alone given multiple potential food sources.

77 FR 19004 - Fishing Capacity Reduction Program for the Southeast Alaska Purse Seine Salmon Fishery

Federal Register 2010, 2011, 2012, 2013, 2014

2012-03-29

... Capacity Reduction Program for the Southeast Alaska Purse Seine Salmon Fishery AGENCY: National Marine... Salmon Fishery. DATES: Comments must be submitted on or before 5 p.m. EST April 13, 2012. ADDRESSES: Send... Seine Salmon Buyback, 1315 East-West Highway, Silver Spring, MD 20910 (see FOR FURTHER INFORMATION...

Gear comparison for sampling age-0 Mountain Whitefish in the Madison River, Montana

USGS Publications Warehouse

Boyer, Jan K.; Guy, Christopher S.; Webb, Molly A.H.; Horton, Travis B.; McMahon, Thomas E.

2017-01-01

The efficacy of various sampling gears for age-0 Mountain Whitefish Prosopium williamsoni is largely unknown, which makes it difficult to investigate recruitment and early life history dynamics for the species. We compared four gears: seine, backpack electrofisher, minnow trap, and lighted minnow trap. Gears were tested in backwaters, large channels, and small channels in the Madison River, Montana. No age-0 Mountain Whitefish were captured in minnow traps or lighted minnow traps. Mean CPUE of age-0 Mountain Whitefish was higher for seining (0.18 fish/m2; SD, 0.39) than for electrofishing (0.01 fish/m2; SD, 0.03), and the CV was lower for seining. A broader length distribution was sampled by seining (17–41 mm) than with electrofishing (21–36 mm). Age-0 Mountain Whitefish CPUE in seines was highest in backwaters. In channel sites, Mountain Whitefish presence was associated with areas of still or slow water ≥2 m2. Relative to the other sampling gears we evaluated, seining was the most efficient gear for sampling age-0 Mountain Whitefish in a lotic ecosystem.

Environmental control on early life stages of flatfishes in the Lima Estuary (NW Portugal)

NASA Astrophysics Data System (ADS)

Ramos, Sandra; Ré, Pedro; Bordalo, Adriano A.

2009-06-01

Several flatfishes spawn in oceanic waters and pelagic larvae are transported inshore to settle in the nursery areas, usually estuaries, where they remain during their juvenile life. Nursery areas appear as extremely important habitats, not only for juveniles but also for the earlier planktonic larval fish. Yet, the majority of nursery studies tend to focus only on one development stage, missing an integrative approach of the entire early life that fishes spent within a nursery ground. Thus, the present study assessed the influence of environmental parameters on the dynamics of the larval and juvenile flatfishes, throughout their nursery life in the Lima Estuary. Between April 2002 and April 2004, fortnightly subsurface ichthyoplankton samples were collected and juveniles were collected from October 2003 until September 2005. Larval assemblages comprised nine flatfish species, while only six were observed among the juvenile assemblages. Solea senegalensis and Platichthys flesus were the most abundant species of both fractions of the Lima Estuary flatfishes. Larval flatfish assemblages varied seasonally, without relevant differences between lower and middle estuary. Platichthys flesus dominated the spring samples and summer and autumn periods were characterized by an increase of overall abundance and diversity of larval flatfishes, mainly S. senegalensis, associated with temperature increase and reduced river flow. On the contrary, during the winter abundance sharply decreased, as a consequence of higher river run-off that might compromised the immigration of incompetent marine larvae. Juvenile flatfishes were more abundant in the middle and upper areas of the estuary, but the species richness was higher near the river mouth. Sediment type, distance from the river mouth, salinity, temperature and dissolved oxygen were identified as the main environmental factors structuring the juvenile flatfish assemblages. Juveniles were spatially discrete, with the most abundant species S. senegalensis and P. flesus associated with the middle and upper estuary, while the remaining species were associated with the lower estuarine areas. The larval fraction exhibited distinct dynamics from the juvenile estuarine flatfish community. Larval flatfishes showed a strong seasonal structure mainly regulated by biological features as the spawning season and also by seasonal variations of water characteristics. On the other hand, juvenile flatfishes were markedly controlled by site specific characteristics such as sediments structure, distance from the river mouth and salinity regime. The present study emphasized the idea that the environmental control varies throughout the ontogenetic development, stressing the importance of integrating all the early life of a species in flatfish nursery studies.

Development and validation of a habitat suitability model for ...

EPA Pesticide Factsheets

We developed a spatially-explicit, flexible 3-parameter habitat suitability model that can be used to identify and predict areas at higher risk for non-native dwarf eelgrass (Zostera japonica) invasion. The model uses simple environmental parameters (depth, nearshore slope, and salinity) to quantitatively describe habitat suitable for Z. japonica invasion based on ecology and physiology from the primary literature. Habitat suitability is defined with values ranging from zero to one, where one denotes areas most conducive to Z. japonica and zero denotes areas not likely to support Z. japonica growth. The model was applied to Yaquina Bay, Oregon, USA, an area that has well documented Z. japonica expansion over the last two decades. The highest suitability values for Z. japonica occurred in the mid to upper portions of the intertidal zone, with larger expanses occurring in the lower estuary. While the upper estuary did contain suitable habitat, most areas were not as large as in the lower estuary, due to inappropriate depth, a steeply sloping intertidal zone, and lower salinity. The lowest suitability values occurred below the lower intertidal zone, within the Yaquina River channel. The model was validated by comparison to a multi-year time series of Z. japonica maps, revealing a strong predictive capacity. Sensitivity analysis performed to evaluate the contribution of each parameter to the model prediction revealed that depth was the most important factor. Sh

Alkylphenolic compounds and bisphenol A contamination within a heavily urbanized area: case study of Paris.

PubMed

Cladière, Mathieu; Gasperi, Johnny; Lorgeoux, Catherine; Bonhomme, Céline; Rocher, Vincent; Tassin, Bruno

2013-05-01

This study evaluates the influence of a heavily urbanized area (Paris Metropolitan area), on receiving water contamination by both bisphenol A (BPA) and alkylphenol ethoxylate (APE) biodegradation product. The study began by investigating concentrations within urban sources. In addition to the more commonly studied wastewater treatment plant effluent, wet weather urban sources (including combined sewer overflows, urban runoff, and total atmospheric fallout) were considered. The initial results highlight a significant contamination of all urban sources (from a few nanograms per liter in atmospheric fallout to several micrograms per liter in the other sources) with clearly distinguishable distribution patterns. Secondly, concentration changes along the Seine River from upstream of the Paris Metropolitan area to downstream were investigated. While the concentrations of BPA and nonylphenoxy acetic acid (NP₁EC) increase substantially due to urban sources, the 4-nonylphenol concentrations remain homogeneous along the Seine. These results suggest a broad dissemination of 4-nonylphenol at the scale of the Seine River basin. Moreover, the relationship between pollutant concentrations and Seine River flow was assessed both upstream and downstream of the Paris conurbation. Consequently, a sharp decrease in dissolved NP1EC concentrations relative to Seine River flow underscores the influence of single-point urban pollution on Seine River contamination. Conversely, dissolved 4-nonylphenol concentrations serve to reinforce the hypothesis of its widespread presence at the Seine River basin scale.

Shifting nitrous oxide source/sink behaviour in a subtropical estuary revealed by automated time series observations

NASA Astrophysics Data System (ADS)

Reading, Michael J.; Santos, Isaac R.; Maher, Damien T.; Jeffrey, Luke C.; Tait, Douglas R.

2017-07-01

The oceans are a major source of the potent greenhouse gas nitrous oxide (N2O) to the atmosphere. However, little information is available on how estuaries and the coastal ocean may contribute to N2O budgets, and on the drivers of N2O in aquatic environments. This study utilised five time series stations along the freshwater to marine continuum in a sub-tropical estuary in Australia (Coffs Creek, Australia). Each time series station captured N2O, radon (222Rn, a natural submarine groundwater discharge tracer), dissolved nitrogen, and dissolved organic carbon (DOC) concentrations for a minimum of 25 h. The use of automated time series observations enabled spatial and tidal-scale variability of N2O to be captured. Groundwater was highly enriched in N2O (up to 306 nM) compared to the receiving surface water. Dissolved N2O supersaturation as high as 386% (27.4 nM) was observed in the upstream freshwater and brackish water areas which represented only a small (∼13%) proportion of the total estuary area. A large area of N2O undersaturation (as low as 53% or 3.9 nM) was observed in the mangrove-dominated lower estuary. This undersaturated area likely resulted from N2O consumption due to nitrate/nitrite (NOx) limitation in mangrove sediments subject to shallow porewater exchange. Overall, the estuary was a minor source of N2O to the atmosphere as the lower mangrove-dominated estuary sink of N2O counteracted groundwater-dominated source of N2O in the upper estuary. Average area-weighted N2O fluxes at the water-air interface approached zero (0.2-0.7 μmol m-2 d-1, depending on piston velocity model used), and were much lower than nitrogen-rich Northern Hemisphere estuaries that are considered large sources of N2O to the atmosphere. This study revealed a temporally and spatially diverse estuary, with areas of N2O production and consumption related to oxygen and total dissolved nitrogen availability, submarine groundwater discharge, and uptake within mangroves.

50 CFR 300.223 - Purse seine fishing restrictions.

Code of Federal Regulations, 2012 CFR

2012-10-01

... days. (iii) For each of the three-year periods 2009-2011 and 2010-2012, there is a limit of 7,764... purse seine around a FAD or within one nautical mile of a FAD. (2) Set a purse seine in a manner... between 20° N. latitude and 20° S. latitude. (iii) The Pacific Islands Regional Administrator has...

Characterisation of organic matter source and sediment distribution in Ashtamudi Estuary, southern India

NASA Astrophysics Data System (ADS)

Kumar, Prem; Ankit, Yadav; Mishra, Praveen K.; Jha, Deepak Kumar; Anoop, Ambili

2017-04-01

In the present study we have focussed on the surface sediments of Ashtamudi Estuary (southern India) to understand (i) the fate and sources of organic matter by investigating lipid biomarker (n-alkanes) distribution in modern sediments and vegetation samples and (ii) the processes controlling the sediment distribution into the lake basin using end-member modelling approach. The sediment n-alkanes from the Ashtamudi Estuary exhibit a pronounced odd over even predominance with maxima at C29 and C31 chain length indicative of a dominant terrestrial contribution. A number of n-alkane indices have been calculated to illustrate the variability in space by considering separately the river dominated northern reaches and tidal influenced southern part of Ashtamudi Estuary. The highest terrigenous organic contents were found in sediments from the river and upper bay sites, with smaller contributions to the lower parts of the estuary. The Paq and TAR (terrigenous/aquatic ratio) indices demonstrate maximum aquatic productivity (plankton growth and submerged macrophytes) in the tidal dominated region of the Ashtamudi Estuary. The carbon preference index (CPI) and average chain length (ACL) provide evidence for high petrogenic organic inputs in the tidal zone, whereas dominant biogenic contribution have been observed in the riverine zone. In addition, the end member modeling of the grain size distribution of the surface sediment samples enabled us to decipher significant sedimentological processes affecting the sediment distribution in the estuarine settings. The end-member distribution showing highest loading with the coarser fraction is maximum where estuary debouches into the sea. However, the samples near the mouth of the river shows finer fraction of the end-member.

Seasonal Distribution and Movements of Atlantic and Shortnose Sturgeon in the Penobscot River Estuary, Maine

USGS Publications Warehouse

Zydlewski, Joseph D.; Fernandes, Stephen J.; Zydlewski, Gayle B.; Wippelhauser, Gail S.; Kinnison, Michael T.

2016-01-01

Relatively little is known about the distribution and seasonal movement patterns of shortnose sturgeon Acipenser brevirostrum and Atlantic sturgeon Acipenser oxyrinchus oxyrinchus occupying rivers in the northern part of their range. During 2006 and 2007, 40 shortnose sturgeon (66–113.4 cm fork length [FL]) and 8 Atlantic sturgeon (76.2–166.2 cm FL) were captured in the Penobscot River, Maine, implanted with acoustic transmitters, and monitored using an array of acoustic receivers in the Penobscot River estuary and Penobscot Bay. Shortnose sturgeon were present year round in the estuary and overwintered from fall (mid-October) to spring (mid-April) in the upper estuary. In early spring, all individuals moved downstream to the middle estuary. Over the course of the summer, many individuals moved upstream to approximately 2 km of the downstream-most dam (46 river kilometers [rkm] from the Penobscot River mouth [rkm 0]) by August. Most aggregated into an overwintering site (rkm 36.5) in mid- to late fall. As many as 50% of the tagged shortnose sturgeon moved into and out of the Penobscot River system during 2007, and 83% were subsequently detected by an acoustic array in the Kennebec River, located 150 km from the Penobscot River estuary. Atlantic sturgeon moved into the estuary from the ocean in the summer and concentrated into a 1.5-km reach. All Atlantic sturgeon moved to the ocean by fall, and two of these were detected in the Kennebec River. Although these behaviors are common for Atlantic sturgeon, regular coastal migrations of shortnose sturgeon have not been documented previously in this region. These results have important implications for future dam removals as well as for rangewide and river-specific shortnose sturgeon management.

Tidal-Flat Macrobenthos as Diets of the Japanese Eel Anguilla japonica in Western Japan, with a Note on the Occurrence of a Parasitic Nematode Heliconema anguillae in Eel Stomachs.

PubMed

Kan, Kotaro; Sato, Masanori; Nagasawa, Kazuya

2016-02-01

Dietary items of the Japanese eel Anguilla japonica inhabiting estuaries were examined by analyses of the gut (stomach and intestine) contents in two areas in Kyushu, western Japan. In a small estuary in Kagoshima Bay, where seven eel guts were examined, almost all of the dietary organisms consisted of Hemigrapsus crabs and Hediste polychaetes, both of which commonly occurred on tidal flats of this site during our survey on the macrobenthic fauna. In another large estuary in the innermost part of the Ariake Sea, where 14 eel guts were examined, 11 macrobenthic species (nine crustaceans, a polychaete, and a gastropod) were found in the gut contents, mostly consisting of mudflat-specific species. The dietary items are almost completely different not only between the two estuaries, but also among three neighboring sites within the large estuary in the Ariake Sea. These results show that Japanese eels feed on various macrobenthic invertebrates inhabiting estuarine tidal flats at each site. The variety of the prey species occupying different habitats indicates that their foraging areas extend to a wide range of estuarine tidal flats from the upper to lower littoral zones. The physalopterid nematode Heliconema anguillae was found parasitic in eel stomachs in both estuaries. The prevalence of the nematode was higher in the estuary in Kagoshima Bay (100%) than that in the Ariake Sea (43%), although the intensity in the former (4-94 nematodes per infected stomach) was comparable to that of the latter (2-96). The relationship between the nematode infection and the dietary items of Japanese eels is discussed.

Is there a seamount effect on microbial community structure and biomass? The case study of Seine and Sedlo seamounts (northeast Atlantic).

PubMed

Mendonça, Ana; Arístegui, Javier; Vilas, Juan Carlos; Montero, Maria Fernanda; Ojeda, Alicia; Espino, Minerva; Martins, Ana

2012-01-01

Seamounts are considered to be "hotspots" of marine life but, their role in oceans primary productivity is still under discussion. We have studied the microbial community structure and biomass of the epipelagic zone (0-150 m) at two northeast Atlantic seamounts (Seine and Sedlo) and compared those with the surrounding ocean. Results from two cruises to Sedlo and three to Seine are presented. Main results show large temporal and spatial microbial community variability on both seamounts. Both Seine and Sedlo heterotrophic community (abundance and biomass) dominate during winter and summer months, representing 75% (Sedlo, July) to 86% (Seine, November) of the total plankton biomass. In Seine, during springtime the contribution to total plankton biomass is similar (47% autotrophic and 53% heterotrophic). Both seamounts present an autotrophic community structure dominated by small cells (nano and picophytoplankton). It is also during spring that a relatively important contribution (26%) of large cells to total autotrophic biomass is found. In some cases, a "seamount effect" is observed on Seine and Sedlo microbial community structure and biomass. In Seine this is only observed during spring through enhancement of large autotrophic cells at the summit and seamount stations. In Sedlo, and despite the observed low biomasses, some clear peaks of picoplankton at the summit or at stations within the seamount area are also observed during summer. Our results suggest that the dominance of heterotrophs is presumably related to the trapping effect of organic matter by seamounts. Nevertheless, the complex circulation around both seamounts with the presence of different sources of mesoscale variability (e.g. presence of meddies, intrusion of African upwelling water) may have contributed to the different patterns of distribution, abundances and also changes observed in the microbial community.

Hybrid seine for full fish community collections

USGS Publications Warehouse

McKenna, James E.; Waldt, Emily M.; Abbett, Ross; David, Anthony; Snyder, James

2013-01-01

Seines are simple and effective fish collection gears, but the net mesh size influences how well the catch represents the fish communities. We designed and tested a hybrid seine with a dual-mesh bag (1/4″ and 1/8″) and compared the fish assemblage collected by each mesh. The fine-mesh net retained three times as many fish and collected more species (as many as eight), including representatives of several rare species, than did the coarser mesh. The dual-mesh bag permitted us to compare both sizes and species retained by each layer and to develop species-specific abundance correction factors, which allowed comparison of catches with the coarse-mesh seine used for earlier collections. The results indicate that a hybrid seine with coarse-mesh wings and a fine-mesh bag would enhance future studies of fish communities, especially when small-bodied fishes or early life stages are the research focus.

Paris

NASA Technical Reports Server (NTRS)

2001-01-01

[figure removed for brevity, see original site] Figure 1

This image of Paris was acquired on July 23, 2000 and covers an area of 23 by 20 km. Known as the City of Light, Paris has been extolled for centuries as one of the great cities of the world. Its location on the Seine River, at a strategic crossroads of land and river routes, has been the key to its expansion since the Parisii tribe first settled here in the 3rd century BC. Paris is an alluring city boasting many monumental landmarks, such as the Cathedral of Notre Dame, the Louvre, and the Eiffel Tower. Its beautiful gardens, world-class cuisine, high fashion, sidewalk cafes, and intellectual endeavors are well known. The city's cultural life is centered on the Left Bank of the Seine, while business and commerce dominate the Right Bank. The image is located at 48.8 degrees north latitude and 2.3 degrees east longitude.

In figure 1, the 4 enlarged areas zoom in to some of the major buildings. In the UPPER LEFT, the Eiffel Tower and its shadow are seen. Based on the length of the shadow and the solar elevation angle of 59 degrees, we can calculate its height as 324 m (1054 ft), compared to its actual height of 303 m (985 ft). In the UPPER RIGHT, the Arc de Triomphe is at the center of the Place de L'etoile, from which radiate 12 major boulevards. In the LOWER LEFT is the Tuileries Garden and the Louvre Museum art its eastern end. In the LOWER RIGHT is the Invalides, the burial place and monument of Napoleon Bonaparte.

The U.S. science team is located at NASA's Jet Propulsion Laboratory, Pasadena, Calif. The Terra mission is part of NASA's Science Mission Directorate.

The Analytic System of Martin Heidegger's Da-Sein and the Anthropology of Max Scheler in the Educational Perspective

ERIC Educational Resources Information Center

Ishchenko, N. I.

2017-01-01

When applied to education, Heidegger's analysis of Da-sein suggests that in his ontology the epistemological problem of clarifying cognition is replaced by the existential problem of the cognition of the understanding individual. Thus, Heidegger treats "education" ontologically as the ability to achieve Da-sein as one's own true and…

Cancer du sein bilatéral synchrone au Maroc: caractéristiques épidémiologiques et cliniques

PubMed Central

Boufettal, Houssine; Samouh, Naïma

2015-01-01

Préciser la fréquence, les facteurs de risque et le pronostic du cancer du sein bilatéral, à partir d'une étude rétrospective de 22 cas de cancer du sein bilatéral synchrone dans un pays du Maghreb. De 2002 à 2010, 625 patientes étaient prises en charge pour cancer du sein au service de Gynécologie-Obstétrique «C» du centre hospitalier universitaire de Casablanca. 22 cas de cancer bilatéral synchrone étaient diagnostiqués. Nos résultats sont comparés avec ceux de la littérature. La fréquence de la bilatéralité du cancer du sein synchrone était de 3,52% (22/625). L'intervalle de temps moyen entre les deux cancers est de 4 mois (0 à 6 mois). Les patientes âgées de moins de 40 ans lors du premier cancer avaient six fois plus de risque de développer un cancer au niveau du sein controlatéral que les femmes âgées de plus de 40 ans. Les patientes atteintes d'une tumeur T3 ou T4 avaient un risque neuf fois plus élevé que les autres. 90,9% (2/22) des cas des premiers cancers sont des adénocarcinomes infiltrants. Les types histologiques du premier et du douzième cancer étaient identiques dans 86,4% (19/22) des cas. Quant au pronostic, il dépend à la fois du stade du premier et du deuxième cancer et le traitement de ce dernier doit obéir aux mêmes règles du traitement du premier cancer. L'incidence du cancer bilatéral synchrone du sein est de 3,52% dans notre série. Le cancer du sein unilatéral constitue un facteur de risque de développement d'un cancer du sein controlatéral. Une surveillance à vie est nécessaire au cours d'un cancer du sein pour détecter un cancer controlatéral. PMID:26090066

Indirect Effects and Potential Cumulative Impacts of Dredging in an Urbanized Estuary

NASA Astrophysics Data System (ADS)

Sommerfield, C. K.; Chen, J.; Ralston, D. K.; Geyer, W. R.

2016-02-01

For over two centuries, the Delaware River and Bay estuary has supported one of the most economically important ports in the United States. To accommodate ships of ever-increasing size, the 165-km axial shipping channel has been deepened to over twice the natural depth of the estuary. While it is known that the channel has modified tides and sedimentation patterns in the estuary, unknown are the impacts on the ecosystem as a whole. A concern is the influence of channelization on sediment movement to the tidal wetland coast, which is eroding at rates on the order of meters per year. Tidal wetlands frame the entire estuary and provide vital ecosystem services ranging from recreation to carbon sequestration. To identify shifts in baseline conditions, we are performing a retrospective analysis of estuarine dynamics using historical bathymetry, numerical modeling, and observational studies. The period of interest extends from 1848 (50 years prior to channel construction) to present. During this period the channel was progressively deepened from its natural depth of 5.5 m to the current depth of 14 m. Preliminary modeling results support independent evidence that the salt intrusion and zone of rapid sediment deposition migrated several 10s of kilometers up-estuary as an indirect effect of deepening. Ironically, the locus of intense deposition now falls squarely within the Wilmington-Philadelphia port complex; river sediment that initially settles in this area is removed by maintenance dredging before it can disperse seaward. Sediment budgetary analysis indicates that the mass of sediment dredged from the upper estuary on average exceeds the mass of the new sediment supplied from the drainage basin. Hence, a probable cumulative impact of dredging is a reduction in sediment delivery to the lower estuary and fringing wetlands. Connections among the shipping channel, wave-tide interactions, and marsh edge erosion are a topic of ongoing modeling and observational research.

Relationships between Zoo- and Phytoplankton in a Warm-temperate, Semi-permanently Closed Estuary, South Africa

NASA Astrophysics Data System (ADS)

Perissinotto, R.; Walker, D. R.; Webb, P.; Wooldridge, T. H.; Bally, R.

2000-07-01

Seasonal surveys were carried out in the shallow, well-conserved temporarily open Nyara Estuary in the Eastern Cape, South Africa. Although temporarily open estuaries constitute over 70% of estuaries in South Africa, few data are available on the structure and functioning of these systems in the region. The main aim of the study was to test the hypothesis that owing to irregular nutrient input, temporarily open estuaries may exhibit poorly-developed pelagic food webs, with low phytoplankton and pelagic biomass in general. Results from the investigation indicate that phytoplankton biomass is generally low, and dominated by pico and nanophytoplankton, with almost total absence of diatoms. This may be explained in terms of the regenerated, rather than new, nutrient pool that is available to phytoplankton as a result of the semipermanently closed nature of the estuary. Chlorophyll a levels never exceeded 4·1 mg m -3. However, low levels of phytoplankton biomass were in contrast to relatively large stocks of zooplankton, which attained maximum levels of about 2 g (dry weight) m -3. Thus, there is an imbalance between the biomass of the primary producers and that of the consumers. In order to satisfy the zooplankton energy budget, either phytoplankton production rates are extremely high or a substantial proportion of their food demands must be met through utilization of alternative sources, such as detritus, protozoans and microphytobenthos. It is suggested that microphytobenthos in particular may play a major role in this regard because of the prevailing good conditions for its growth in this type of ecosystem. Microbenthic chlorophyll a concentrations in the Nyara Estuary are in the upper range of values measured in South African estuaries, with an average of ≅190 mg m -2. Further studies are needed to investigate the ability of the dominant species of zooplankton to ingest and assimilate benthic microalgae, particularly during the day when most species remain in close association with the substratum.

Impact of seaweed beachings on dynamics of δ(15)N isotopic signatures in marine macroalgae.

PubMed

Lemesle, Stéphanie; Mussio, Isabelle; Rusig, Anne-Marie; Menet-Nédélec, Florence; Claquin, Pascal

2015-08-15

A fine-scale survey of δ(15)N, δ(13)C, tissue-N in seaweeds was conducted using samples from 17 sampling points at two sites (Grandcamp-Maisy (GM), Courseulles/Mer (COU)) along the French coast of the English Channel in 2012 and 2013. Partial triadic analysis was performed on the parameter data sets and revealed the functioning of three areas: one estuary (EstA) and two rocky areas (GM(∗), COU(∗)). In contrast to oceanic and anthropogenic reference points similar temporal dynamics characterized δ(15)N signatures and N contents at GM(∗) and COU(∗). Nutrient dynamics were similar: the N-concentrations in seawater originated from the River Seine and local coastal rivers while P-concentrations mainly from these local rivers. δ(15)N at GM(∗) were linked to turbidity suggesting inputs of autochthonous organic matter from large-scale summer seaweed beachings made up of a mixture of Rhodophyta, Phaeophyta and Chlorophyta species. This study highlights the coupling between seaweed beachings and nitrogen sources of intertidal macroalgae. Copyright © 2015 Elsevier Ltd. All rights reserved.

The blooms of a cyanobacterium, Microcystis cf. aeruginosa in a severely polluted estuary, the Golden Horn, Turkey

NASA Astrophysics Data System (ADS)

Taş, Seyfettin; Okuş, Erdoğan; Aslan-Yılmaz, Aslı

2006-07-01

The distribution of toxic cyanobacterium Microcystis cf. aeruginosa in the severely polluted Golden Horn Estuary was studied from 1998 to 2000. Microcystis persisted at the upper estuary where the water circulation was poor and values ranged between 2.9 × 10 4 and 2.7 × 10 6 cells ml -1 throughout the study. Simultaneously measured physical (salinity, temperature, rainfall and secchi disc) and chemical parameters (nutrients and dissolved oxygen) were evaluated together with Microcystis data. Although the Microcystis blooms generally occur in summer due to the increase in temperature, the blooms were recorded in winter in the present study. The abundance of Microcystis depended on the variations in salinity and both blooms were recorded below S = 2. A moderate partial correlation between Microcystis abundance and salinity was detected in the presence of temperature, dissolved oxygen and precipitation data ( r = -0.561, p = 0.002). The M. cf. aeruginosa abundance was low in the summer when the salinity was higher than winter. A remarkable increase in the eukaryotic phytoplankton abundance following the improvements in the water quality of the estuary occurred, whilst the Microcystis abundance remained below bloom level.

Biogeochemistry of Dimethylsulfide, Dimethylsulfoniopropionate, and Acrylic Acid in the Changjiang Estuary and the East China Sea

NASA Astrophysics Data System (ADS)

Wu, Xi; Li, Pei-Feng; Liu, Chun-Ying; Zhang, Hong-Hai; Yang, Gui-Peng; Zhang, Sheng-Hui; Zhu, Mao-Xu

2017-12-01

The distributions of dimethylsulfide (DMS), dimethylsulfoniopropionate (DMSP), and acrylic acid (AA) were investigated in the Changjiang Estuary during winter (dry season) and summer (wet season) 2014 and in the East China Sea (ECS) during summer 2015. The rates of dissolved DMSP (DMSPd) degradation with DMS and AA production, DMS degradation, and AA degradation in the ECS were also studied. Significant seasonal variations in DMS(P) and AA concentrations were observed in the Changjiang Estuary with higher values during the wet season than during the dry season. The maximum ratio of AA/chlorophyll a (Chl a) occurred at the mouth of the Changjiang Estuary due to the combined effects of production from DMSP and terrestrial inputs from the Changjiang Estuary. The distributions of DMS(P) and AA in the ECS were dramatically influenced by the Kuroshio Current and the upwelling caused by the Taiwan Warm Current. The ratios of DMS(P)/Chl a and AA/Chl a exhibited similar patterns in the surface seawater of the ECS, which indicated that phytoplankton species and biomass might play important roles in controlling the distributions of DMS(P) and AA. In vertical profiles, high values of AA emerged in the upper water column and bottom seawater of the Changjiang Estuary. Meanwhile, the maxima of DMS(P) and AA generally appeared in the surface or euphotic layer, whereas their minima arose in the bottom seawater of the ECS. The degradation rates of DMSPd, DMS, and AA in the inshore waters were higher than those in the open sea.

Tracing Mississippi River influences in estuarine food webs of coastal Louisiana.

PubMed

Wissel, Björn; Fry, Brian

2005-08-01

The Breton Sound estuary in southern Louisiana receives large amounts of Mississippi River water via a controlled diversion structure at the upstream end of the estuary. We used stable isotopes to trace spatial and seasonal responses of the downstream food web to winter and spring introductions of river water. Analysis of delta13C, delta15N, and delta34S in the common local consumers such as grass shrimp (Palaemonetes sp.), barnacles (Balanus sp.), and small plankton-feeding fish (bay anchovies, Anchoa mitchilli) showed that the diversion was associated with two of the five major source regimes that were supporting food webs: a river regime near the diversion and a river-influenced productive marsh regime farther away from the diversion. Mixing models identified a third river-influenced source regime at the marine end of the estuary where major natural discharge from the Bird's Foot Delta wraps around into estuarine waters. The remaining two source regimes represented typical estuarine conditions: local freshwater sources especially from precipitation and a brackish source regime representing higher salinity marine influences. Overall, the Mississippi River diversion accounted for 75% of food web support in the upper estuary and 25% in the middle estuary, with influence strongest along known flow pathways and closest to the diversion. Isotopes also traced seasonal changes in river contributions, and indicated increased plant community productivity along the major flow path of diversion water. In the Breton Sound estuary, bottom-up forcing of food webs is strongly linked to river introductions and discharge, occurring in spatial and temporal patterns predictable from known river input regimes and known hydrologic circulation patterns.

Effect of Climate Change on Water Temperature and ...

EPA Pesticide Factsheets

There is increasing evidence that our planet is warming and this warming is also resulting in rising sea levels. Estuaries which are located at the interface between land and ocean are impacted by these changes. We used CE-QUAL-W2 water quality model to predict changes in water temperature as a function of increasing air temperatures and rising sea level for the Yaquina Estuary, Oregon (USA). Annual average air temperature in the Yaquina watershed is expected to increase about 0.3 deg C per decade by 2040-2069. An air temperature increase of 3 deg C in the Yaquina watershed is likely to result in estuarine water temperature increasing by 0.7 to 1.6 deg C. Largest water temperature increases are expected in the upper portion of the estuary, while sea level rise may ameliorate some of the warming in the lower portion of the estuary. Smallest changes in water temperature are predicted to occur in the summer, and maximum changes during the winter and spring. Increases in air temperature may result in an increase in the number of days per year that the 7-day maximum average temperature exceeds 18 deg C (criterion for protection of rearing and migration of salmonids and trout) as well as other water quality concerns. In the upstream portion of the estuary, a 4 deg C increase in air temperature is predicted to cause an increase of 40 days not meeting the temperature criterion, while in the lower estuary the increase will depend upon rate of sea level rise (rang

Mapping coastal sea level at high resolution with radar interferometry: the SWOT Mission

NASA Astrophysics Data System (ADS)

Fu, L. L.; Chao, Y.; Laignel, B.; Turki, I., Sr.

2017-12-01

The spatial resolution of the present constellation of radar altimeters in mapping two-dimensional sea surface height (SSH) variability is approaching 100 km (in wavelength). At scales shorter than 100 km, the eddies and fronts are responsible for the stirring and mixing of the ocean, especially important in the various coastal processes. A mission currently in development will make high-resolution measurement of the height of water over the ocean as well as on land. It is called Surface Water and Ocean Topography (SWOT), which is a joint mission of US NASA and French CNES, with contributions from Canada and UK. SWOT will carry a pair of interferometry radars and make 2-dimensional SSH measurements over a swath of 120 km with a nadir gap of 20 km in a 21-day repeat orbit. The synthetic aperture radar of SWOT will make SSH measurement at extremely high resolution of 10-70 m. SWOT will also carry a nadir looking conventional altimeter and make 1-dimensional SSH measurements along the nadir gap. The temporal sampling varies from 2 repeats per 21 days at the equator to more than 4 repeats at mid latitudes and more than 6 at high latitudes. This new mission will allow a continuum of fine-scale observations from the open ocean to the coasts, estuaries and rivers, allowing us to investigate a number of scientific and technical questions in the coastal and estuarine domain to assess the coastal impacts of regional sea level change, such as the interaction of sea level with river flow, estuary inundation, storm surge, coastal wetlands, salt water intrusion, etc. As examples, we will illustrate the potential impact of SWOT to the studies of the San Francisco Bay Delta, and the Seine River estuary, etc. Preliminary results suggest that the SWOT Mission will provide fundamental data to map the spatial variability of water surface elevations under different hydrodynamic conditions and at different scales (local, regional and global) to improve our knowledge of the complex physical processes in the coastal and estuarine systems in response to global sea level changes.

The Physical and Chemical Conditions of Chesapeake Bay; An Evaluation.

DTIC Science & Technology

1972-01-01

Back, Magothy , and ?evern (Pritchard, 1968). The small freshwater input to these tributaries is insufficient to maintain a steady circulation patterr...including the South, Magothy , Miles, Chester, and Severn estuaries. In the upper reaches of the main body of the Bay, the Susque- hanna is the major

WIND-DRIVEN LATERAL VARIABILITY IN THE UPPER NEUSE RIVER ESTUARY AND ITS EFFECT ON FISH KILLS. (R828677C001)

EPA Science Inventory

The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

WIND-DRIVEN LATERAL VARIABILITY IN THE UPPER NEUSE RIVER ESTUARY AND ITS EFFECT ON FISH KILLS. (R826938)

EPA Science Inventory

The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

NATURAL FACTORS CONTROLLING INTERTIDAL EELGRASS: IS T17THHIS AS HIGH AS WE CAN GET?

EPA Science Inventory

Eelgrass (Zostera marina) in many open-coast Pacific Northwest estuaries is primarily intertidal, yet little research has been done on the natural factors which control its upper intertidal growth boundary. In Dec. 2002 a two year study was completed in Yaquina Bay (Newport, OR)...

Comparison of fish catches with buoyant pop nets and seines in vegetated and nonvegetated habitats

USGS Publications Warehouse

Dewey, M.R.; Holland-Bartels, L. E.; Zigler, S.J.

1989-01-01

Two models of pop nets were developed to sample fish in shallow riverine waters, one for use in vegetated areas and the other for nonvegetated areas. Both nets have a mechanical release mechanism that can be tripped from the water surface. Replicated field tests were conducted to compare pop-net catches with bag-seine collections every 2 weeks from May through mid-October. Overall, total catch per effort did not vary significantly (P 2) was smaller than the area swept by the average seine haul (70-140 m2). The pop net effectively sampled fish in shallow nonvegetated habitats and was useful in heavily vegetated areas where seining or electroshocking was difficult.

Contribution of treated wastewater to the microbiological quality of Seine River in Paris.

PubMed

Moulin, Laurent; Richard, Fanny; Stefania, Sabrina; Goulet, Marion; Gosselin, Sylvie; Gonçalves, Alexandre; Rocher, Vincent; Paffoni, Catherine; Dumètre, Aurélien

2010-10-01

Urban part of Seine River serving as drinking water supply in Paris can be heavily contaminated by Cryptosporidium spp. and Giardia duodenalis. In the absence of agricultural practice in this highly urbanized area, we investigated herein the contribution of treated wastewater to the microbiological quality of this river focusing on these two parasites. Other microorganisms such as faecal bacterial indicators, enteroviruses and oocysts of Toxoplasma gondii were assessed concurrently. Raw wastewaters were heavily contaminated by Cryptosporidium and Giardia (oo)cysts, whereas concentrations of both protozoa in treated wastewater were lower. Treated wastewater, flowed into Seine River, had a parasite concentration closed to the one found along the river, in particular at the entry of a drinking water plant (DWP). Even if faecal bacteria were reliable indicators of a reduction in parasite concentrations during the wastewater treatment, they were not correlated to protozoal contamination of wastewater and river water. Oocysts of T. gondii were not found in both raw and treated wastewater, or in Seine River. Parasitic contamination was shown to be constant in the Seine River up to 40 km upstream Paris. Altogether, these results strongly suggest that treated wastewater does not contribute to the main parasitic contamination of the Seine River usually observed in this urbanized area. Copyright © 2010 Elsevier Ltd. All rights reserved.

The spatial and temporal trends of Cd, Cu, Hg, Pb and Zn in Seine River floodplain deposits (1994-2000)

USGS Publications Warehouse

Grosbois, C.; Meybeck, Michel; Horowitz, A.; Ficht, A.

2006-01-01

Fresh floodplain deposits (FD), from 11 key stations, covering the Seine mainstem and its major tributaries (Yonne, Marne and Oise Rivers), were sampled from 1994 to 2000. Background levels for Cd, Cu, Hg, Pb, and Zn were established using prehistoric FD and actual bed sediments collected in small forested sub-basins in the most upstream part of the basin. Throughout the Seine River Basin, FD contain elevated concentrations of Cd, Cu, Hg, Pb and Zn compared to local background values (by factors > twofold). In the Seine River Basin, trace element concentrations display substantial downstream increases as a result of increasing population densities, particularly from Greater Paris (10 million inhabitants), and reach their maxima at the river mouth (Poses). These elevated levels make the Seine one of the most heavily impacted rivers in the world. On the other hand, floodplain-associated trace element levels have declined over the past 7 years. This mirrors results from contemporaneous suspended sediment surveys at the river mouth for the 1984-1999 period. Most of these temporal declines appear to reflect reductions in industrial and domestic solid wastes discharged from the main Parisian sewage plant (Seine Aval). ?? 2005 Elsevier B.V. All rights reserved.

Hydrocarbons in sediments along a tropical estuary-shelf transition area: Sources and spatial distribution.

PubMed

Maciel, Daniele Claudino; de Souza, José Roberto Botelho; Taniguchi, Satie; Bícego, Márcia Caruso; Schettini, Carlos Augusto França; Zanardi-Lamardo, Eliete

2016-12-15

Estuaries generally act as sediment traps and may retain a range of contaminants associated to this matrix. Aliphatic hydrocarbons (AHs) were investigated in Capibaribe Estuarine System and adjacent shelf, Northeast of Brazil, to evaluate the contamination and to better understand its functionality related to the coast. Fourteen sediment samples were analyzed, using gas chromatography with flame ionization detection. Total AHs concentrations ranged from 7.5 to 190.3μgg -1 and n-alkanes ranged from below detection limit (

Modern diatom assemblages as tools for paleoenvironmental reconstruction: a case study from estuarine intertidal zones in southern Iberia

NASA Astrophysics Data System (ADS)

Gomes, Ana; Boski, Tomasz; Moura, Delminda; Szkornik, Katie; Witkowski, Andrzej; Connor, Simon; Laut, Lazaro; Sobrinho, Frederico; Oliveira, Sónia

2017-04-01

Diatoms are unicellular algae that live in saline, brackish and freshwater environments, either floating in the water column or associated with various substrates (e.g., muddy and sandy sediments). Diatoms are sensitive to changes in environmental variables such as salinity, sediment texture, nutrient availability, light and temperature. This characteristic, along with their short lifespan, allows diatoms to quickly respond to environmental changes. Since the beginning of the 20th century, diatoms have been widely used to study the Holocene evolution of estuaries worldwide, particularly to reconstruct ecological responses to sea-level and climate changes. However, diatoms have been poorly studied in estuarine intertidal zones, due to the complexity of these environments, which have both fluvial and marine influences. The aim of this study was to understand diatom diversity and spatial distribution in intertidal zones from two geomorphologically and hydrologically distinct estuaries. Sediment samples were collected from within the intertidal zones along the Arade and Guadiana River estuaries in southern Iberia. The sampling points embraced almost all the tidal and salinity gradients of both estuaries, capturing the highest possible environmental variability and hence of diatom assemblages. At each sampling point, the salinity and pH of the sediment interstitial water were measured. The sediment samples were subdivided for diatom identification, textural analysis and organic matter determination. All sampling points were georeferenced by DGPS and the duration of tidal inundation was calculated for each site. Following diatom identification, the data were analysed statistically (i.e. cluster analysis, PCA, DCA and RDA). The present study revealed that there is a great diatom diversity in both estuaries (418 species), with several species new to science. The most important diatom species (with abundances higher or equal to 5%) occur in five ecological groups, which are associated to five distinct environments: lower estuary sandflats, lower estuary mudflats, middle to upper estuary mudflats, lower estuary salt marshes and middle estuary salt marshes. This study allowed us to establish modern analogues that are essential for developing transfer functions (quantitative palaeoenvironmental estimates). These methods will enable more accurate Holocene paleoenvironmental reconstructions on the southern Iberian coast and will improve knowledge about the evolution of estuarine environments globally . The work was supported by the SFRH/BD/62405/2009 fellowship, funded by the Portuguese Foundation for Science and Technology.

IDENTIFICATION OF SPECIES-ENVIRONMENT RELATIONSHIPS IN THE HUDSON-RARITAN ESTUARY AND RELATED SUB-BASINS

EPA Science Inventory

The US EP A's Regional Environmental Monitoring and Assessment Program (REMAP) conducted a study in 1993/94 to assess the effects of sediment contamination in the Hudson- Raritan area (Upper New York, Raritan Bay, Jamaica Bay, western Long Island Sound and the Bight Apex). This s...

Stratification on the Skagit Bay Tidal Flats

DTIC Science & Technology

2012-09-01

and wind -driven currents can 11 affect the potential energy anomaly balance in estuaries and ROFIs during storms (Yang and Khangaonkar, 2009...30 3.4.1 The Potential Energy Anomaly Balance...turbulent energy is dissipated by destabilizing the fluid rather than by slowing the upper water column (Turner, 1973). Overall, stratification tends to

Processes forcing the suspended sediments distribution in a wide, shallow and microtidal estuary: a numerical case study for the Río de la Plata

NASA Astrophysics Data System (ADS)

Simionato, Claudia; Moreira, Diego

2017-04-01

The impact of the diverse mechanisms driving the suspended sediments distribution in the wide, shallow and microtidal Río de la Plata (RdP) estuary and the adjacent shelf is studied by means of a set of process-oriented numerical simulations. With that aim, a regional application of the hydro-sedimentological Model for Applications at Regional Scale (MARS) is implemented, tested and run under diverse conditions. Even the simulations are idealized, they reproduce both qualitatively and quantitatively well the main features of the suspended sediments observed distribution, particularly the mean values of concentration and its gradients: perpendicular to the estuary axis at the upper and intermediate RdP and parallel to the estuary axis at its outer part. Even though naturally the diameter of the sediments that deposit decays with the distance to the sources (with sands and silts dominating in the upper estuary and fine silts and clays over the Barra del Indio), model results show that the large width and the geometry of the estuary play an important role in the sedimentation process. The widening and deepening, and the associated significant reduction of the currents speed that occurs after (i) the confluence of the tributaries and (ii) downstream the Barra del Indio Shoal, favors sediments deposition downstream those areas. Even though tides are of small amplitude in the study area, they have a significant impact on the lateral mixing and the re-suspension of bottom sediments; this last augments the concentration of fine sediments in the layers close to the bottom but their energy is not enough to rise them up to the surface. The model reproduces the increment in the concentration of fine sediments observed in the areas where tidal dissipation energy by bottom friction maximizes (over the southern coast of the RdP and around Punta Piedras and Punta Rasa), but shows that tides alone cannot account for the observed maxima. Winds (which can be quite large over this area) enhance horizontal mixing, smoothing the pattern produced by the tides. Wind waves are the most important forcing for the vertical mixing of the sediments. Their effect is most evident along the southern coast of the RdP and the Barra del Indio Shoal, where wind waves rise to the surface the sediments resuspended by tides. The bottom salinity front acts retaining the sediments upstream the Barra del Indio shoal; there, estuarine currents and flocculation play an important role in sediments deposition.

Recent sediments of the St. Marks River coast, northwest Florida, a low-energy, sediment-starved estuary

DOE Office of Scientific and Technical Information (OSTI.GOV)

Highly, A.B.; Donoghue, J.F.; Garrett, C.

1994-03-01

The St. Marks river of northwest Florida drains parts of the central panhandle of northwestern Florida, and a small area in southwestern Georgia. It traverses nearly 56.3 kilometers through a watershed of 1,711 square kilometers. The slow-moving river carries little sediment and terminates in Apalachee Bay, a low-energy embayment in the northeasternmost Gulf of Mexico. The coastal region is characterized by mudflats, seagrass beds, and an absence of sandy beaches and barrier islands. Clastic sediments of the coast and shelf rest on a shallow-dipping carbonate platform. The upper surface of the platform is locally karstic. As a result, like othermore » rivers in this region of northwest Florida, the St. Marks watershed is marked by sinkholes and disappearing streams. The fact that the river travels underground through part of its lower watershed serves to trap or sieve some of its clastic load. In the estuary, the undulating karst topography causes the estuarine sediments to vary in thickness from 0 to 4+ meters. The concave shape of the coastline and its orientation with respect to prevailing winds result in low average wave energy. Sedimentation is therefore controlled by riverine and tidal forces. The relatively low energy conditions result in good preservation of the sedimentary record in the St. Marks estuary. A suite of sediment cores has been collected in the lower river, estuary and adjacent Gulf of Mexico. Lead-210 dating results indicate a slow average sedimentation rate ([approximately] 1mm/yr). Investigation of sedimentation rates and sediment characteristics over time in the St. Marks estuary indicate that sedimentologic conditions in this low-energy environment have been relatively stable during the recent geologic history of the estuary.« less

Precision and relative effectiveness of a purse seine for sampling age-0 river herring in lakes

USGS Publications Warehouse

Devine, Matthew T.; Roy, Allison; Whiteley, Andrew R.; Gahagan, Benjamin I.; Armstrong, Michael P.; Jordaan, Adrian

2018-01-01

Stock assessments for anadromous river herring, collectively Alewife Alosa pseudoharengus and Blueback Herring A. aestivalis, lack adequate demographic information, particularly with respect to early life stages. Although sampling adult river herring is increasingly common throughout their range, currently no standardized, field‐based, analytical methods exist for estimating juvenile abundance in freshwater lakes. The objective of this research was to evaluate the relative effectiveness and sampling precision of a purse seine for estimating densities of age‐0 river herring in freshwater lakes. We used a purse seine to sample age‐0 river herring in June–September 2015 and June–July 2016 in 16 coastal freshwater lakes in the northeastern USA. Sampling effort varied from two seine hauls to more than 50 seine hauls per lake. Catch rates were highest in June and July, and sampling precision was maximized in July. Sampling at night (versus day) in open water (versus littoral areas) was most effective for capturing newly hatched larvae and juveniles up to ca. 100 mm TL. Bootstrap simulation results indicated that sampling precision of CPUE estimates increased with sampling effort, and there was a clear threshold beyond which increased effort resulted in negligible increases in precision. The effort required to produce precise CPUE estimates, as determined by the CV, was dependent on lake size; river herring densities could be estimated with up to 10 purse‐seine hauls (one‐two nights) in a small lake (<50 ha) and 15–20 hauls (two‐three nights) in a large lake (>50 ha). Fish collection techniques using a purse seine as described in this paper are likely to be effective for estimating recruit abundance of river herring in freshwater lakes across their range.

Comparison of visual survey and seining methods for estimating abundance of an endangered, benthic stream fish

USGS Publications Warehouse

Jordan, F.; Jelks, H.L.; Bortone, S.A.; Dorazio, R.M.

2008-01-01

We compared visual survey and seining methods for estimating abundance of endangered Okaloosa darters, Etheostoma okaloosae, in 12 replicate stream reaches during August 2001. For each 20-m stream reach, two divers systematically located and marked the position of darters and then a second crew of three to five people came through with a small-mesh seine and exhaustively sampled the same area. Visual surveys required little extra time to complete. Visual counts (24.2 ?? 12.0; mean ?? one SD) considerably exceeded seine captures (7.4 ?? 4.8), and counts from the two methods were uncorrelated. Visual surveys, but not seines, detected the presence of Okaloosa darters at one site with low population densities. In 2003, we performed a depletion removal study in 10 replicate stream reaches to assess the accuracy of the visual survey method. Visual surveys detected 59% of Okaloosa darters present, and visual counts and removal estimates were positively correlated. Taken together, our comparisons indicate that visual surveys more accurately and precisely estimate abundance of Okaloosa darters than seining and more reliably detect presence at low population densities. We recommend evaluation of visual survey methods when designing programs to monitor abundance of benthic fishes in clear streams, especially for threatened and endangered species that may be sensitive to handling and habitat disturbance. ?? 2007 Springer Science+Business Media, Inc.

Distributions of organochlorine compounds in sediments from Jiulong River Estuary and adjacent Western Taiwan Strait: Implications of transport, sources and inventories.

PubMed

Wu, Yuling; Wang, Xinhong; Ya, Miaolei; Li, Yongyu; Hong, Huasheng

2016-12-01

Estuaries and coastal areas strongly influenced by terrestrial inputs resulted from anthropogenic activities. To study the distributions, origins, potential transport and burden of organochlorine compounds (OCs) from river to marginal sea, organochlorine pesticides (OCPs) and polychlorinated biphenyls (PCBs) were investigated in surface sediments collected from a subtropical estuary (Jiulong River Estuary, JRE) and the inner shelf of adjacent Western Taiwan Strait (WTS). The concentrations of OCPs and PCBs were from 5.2 to 551.7 and 1.0-8.1 ng g -1 (dry weight), respectively. OCP concentrations in the JRE were higher than in adjacent WTS, and a decreasing trend with the ascending distance from the estuary to the open sea was observed. Concentrations of DDTs were quite high in the upper reach of the estuary, inferred from antifouling paint on fishing boats of a local shipping company. According to established sediment quality guidelines, DDTs in the JRE posed potential ecological risk. HCHs in the estuary were mainly derived from the weathered HCHs preserved in the agriculture soils via local major river runoffs. OCPs patterns showed that OCPs in the south coast of WTS were resulted from local sources via river input, while OCPs in the north coast attributed to the long-range transport derived by the Fujian-Zhejiang Coastal Current. Minor variations of PCB concentrations and homologs indicated that PCBs were not the main pollutant in the agricultural region, consistent lighter PCBs reflected industrial PCBs were transported via atmospheric deposition derived by East Asia Monsoon. Moreover, the primary distribution pattern founded for DDTs and the considerable mass inventories and burdens calculated (258.1 ng cm -2 and 10.4 tones for OCPs) that higher than Pearl River Delta and Yangtze River Delta, together suggested that the contaminated sediments in the study area may be a potential source of OCPs to the global ocean. Copyright © 2016 Elsevier Ltd. All rights reserved.

Beluga whale summer habitat associations in the Nelson River estuary, western Hudson Bay, Canada.

PubMed

Smith, Alexander J; Higdon, Jeff W; Richard, Pierre; Orr, Jack; Bernhardt, Warren; Ferguson, Steven H

2017-01-01

To understand beluga whale (Delphinapterus leucas) estuarine use in the Nelson River estuary, southwest Hudson Bay, we recorded and examined beluga movements and habitat associations for the July through August period in 2002-2005. We compared locations of belugas fitted with satellite transmitters ("tags") (2002-2005) and aerial-surveyed (2003 and 2005) belugas for years of differing freshwater flow from the Nelson River which is influenced by hydroelectric activity. Using the beluga telemetry location data, we estimated an early August behavioral shift in beluga distribution patterns from local estuarine use to a progressively more migratory behavior away from the estuary. The timing of this shift in behavior was also apparent in results of beluga aerial surveys from the 1940s-1960s, despite environmental changes including later freeze-up and warming ocean temperatures. Overall, during the higher than average discharge ("wet") year of 2005, the three tagged belugas ranged farther from the Nelson River but not farther from the nearest shore along southwestern Hudson Bay, compared to the 10 tagged belugas tracked during the "dry" years of 2002-2004 with below average discharges. Aerial survey data for 2003 and 2005 display a similar dry vs. wet year shift in spatial patterns, with no significant change in overall density of belugas within the study area. In the Nelson estuary, proximity to the fresh-salt water mixing area may be more important than the shallow waters of the upper estuary. Killer whales (Orcinus orca) were observed in the Churchill area (200 km northwest) during each year of study, 2002-05, and belugas may benefit from the proximity to shallow estuary waters that provide protection from the larger-bodied predator. Study results contribute to an understanding of the influence of environmental variation on how and why belugas use estuaries although considerable uncertainties exist and additional research is required.

Beluga whale summer habitat associations in the Nelson River estuary, western Hudson Bay, Canada

PubMed Central

Smith, Alexander J.; Higdon, Jeff W.; Richard, Pierre; Orr, Jack; Bernhardt, Warren

2017-01-01

To understand beluga whale (Delphinapterus leucas) estuarine use in the Nelson River estuary, southwest Hudson Bay, we recorded and examined beluga movements and habitat associations for the July through August period in 2002–2005. We compared locations of belugas fitted with satellite transmitters (“tags”) (2002–2005) and aerial-surveyed (2003 and 2005) belugas for years of differing freshwater flow from the Nelson River which is influenced by hydroelectric activity. Using the beluga telemetry location data, we estimated an early August behavioral shift in beluga distribution patterns from local estuarine use to a progressively more migratory behavior away from the estuary. The timing of this shift in behavior was also apparent in results of beluga aerial surveys from the 1940s–1960s, despite environmental changes including later freeze-up and warming ocean temperatures. Overall, during the higher than average discharge (“wet”) year of 2005, the three tagged belugas ranged farther from the Nelson River but not farther from the nearest shore along southwestern Hudson Bay, compared to the 10 tagged belugas tracked during the “dry” years of 2002–2004 with below average discharges. Aerial survey data for 2003 and 2005 display a similar dry vs. wet year shift in spatial patterns, with no significant change in overall density of belugas within the study area. In the Nelson estuary, proximity to the fresh-salt water mixing area may be more important than the shallow waters of the upper estuary. Killer whales (Orcinus orca) were observed in the Churchill area (200 km northwest) during each year of study, 2002–05, and belugas may benefit from the proximity to shallow estuary waters that provide protection from the larger-bodied predator. Study results contribute to an understanding of the influence of environmental variation on how and why belugas use estuaries although considerable uncertainties exist and additional research is required. PMID:28767655

Contribution of Priority PAHs and POPs to Ah Receptor-Mediated Activities in Sediment Samples from the River Elbe Estuary, Germany

PubMed Central

Otte, Jens C.; Keiter, Steffen; Faßbender, Christopher; Higley, Eric B.; Rocha, Paula Suares; Brinkmann, Markus; Wahrendorf, Dierk-Steffen; Manz, Werner; Wetzel, Markus A.; Braunbeck, Thomas; Giesy, John P.; Hecker, Markus; Hollert, Henner

2013-01-01

The estuary of the River Elbe between Hamburg and the North Sea (Germany) is a sink for contaminated sediment and suspended particulate matter (SPM). One major concern is the effect of human activities on the hydrodynamics, particularly the intensive dredging activities in this area that may result in remobilization of sediment-bound pollutants. The aim of this study was to identify pollutants contributing to the toxicological risk associated with re-suspension of sediments in the Elbe Estuary by use of an effect-directed analysis that combines chemical and biological analyses in with specific fractionation techniques. Sediments were collected from sites along the Elbe Estuary and a site from a small harbor basin of the Elbe Estuary that is known to be polluted. The sixteen priority EPA-PAHs were quantified in organic extracts of sediments. In addition, dioxin equivalents of sediments were investigated by use of the 7-ethoxyresorufin O-deethylase assay with RTL-W1 cells and the Ah receptor-mediated luciferase transactivation assay with H4IIE-luc cells. Quantification of the 16 priority PAHs revealed that sediments were moderately contaminated at all of the sites in the Elbe River Estuary (<0.02–0.906 µg/g dw). Sediments contained relatively small concentrations of dioxin equivalents (Bio-TEQ) with concentrations ranging from 15.5 to 322 pg/g dw, which were significantly correlated with dioxin equivalents calculated based on toxicity reference values and concentrations of PAH. The concentration of Bio-TEQ at the reference site exceeded 200,000 pg/g dw. In a potency balance the 16 PAHs explained between 47 and 118% of the Bio-TEQ in the luciferase assay, which can be explained by the constant input of PAHs bound to SPM from the upper course of the Elbe River into its estuary. Successful identification of a significant portion of dioxin-like activity to priority PAHs in complex environmental samples such as sediments has rarely been reported. PMID:24146763

Mesohabitats, fish assemblage composition, and mesohabitat use of the Rio Grande silvery minnow over a range of seasonal flow regimes in the Rio Grande/Rio Bravo del Norte, in and near Big Bend National Park, Texas, 2010-11

USGS Publications Warehouse

Moring, J. Bruce; Braun, Christopher L.; Pearson, Daniel K.

2014-01-01

There were no statistically significant differences between the stream velocities associated with seine hauls of the Rio Grande silvery minnow and Tamaulipas shiner. Stream velocities associated with the seine hauls that included Rio Grande silvery minnow indicate that this species is predominantly found in low-velocity mesohabitats. Velocities associated with seine hauls that included the Tamaulipas shiner represented a much broader overall range of velocities than those associated with Rio Grande silvery minnow collections. No statistically significant differences were found between the depths for seine hauls that included Rio Grande silvery minnow or Tamaulipas shiner. The Rio Grande silvery minnow was more commonly collected in seine hauls from mesohabitats dominated by cobble substrates and less frequently collected in mesohabitats with substrates dominated by fine-sized silt and clay particles, gravels, and sands, in that order. In contrast, the Tamaulipas shiner was broadly distributed among mesohabitats characterized as having gravel, cobble, and silt and clay.

Numerical and Qualitative Contrasts of Two Statistical Models ...

EPA Pesticide Factsheets

Two statistical approaches, weighted regression on time, discharge, and season and generalized additive models, have recently been used to evaluate water quality trends in estuaries. Both models have been used in similar contexts despite differences in statistical foundations and products. This study provided an empirical and qualitative comparison of both models using 29 years of data for two discrete time series of chlorophyll-a (chl-a) in the Patuxent River estuary. Empirical descriptions of each model were based on predictive performance against the observed data, ability to reproduce flow-normalized trends with simulated data, and comparisons of performance with validation datasets. Between-model differences were apparent but minor and both models had comparable abilities to remove flow effects from simulated time series. Both models similarly predicted observations for missing data with different characteristics. Trends from each model revealed distinct mainstem influences of the Chesapeake Bay with both models predicting a roughly 65% increase in chl-a over time in the lower estuary, whereas flow-normalized predictions for the upper estuary showed a more dynamic pattern, with a nearly 100% increase in chl-a in the last 10 years. Qualitative comparisons highlighted important differences in the statistical structure, available products, and characteristics of the data and desired analysis. This manuscript describes a quantitative comparison of two recently-

Analysis of change of red tide species in Yodo River estuary by the numerical ecosystem model.

PubMed

Hayashi, Mitsuru; Yanagi, Tetsuo

2008-01-01

Occurrence number of red tides in Osaka Bay in Japan is more than 20 cases every year. Diatom red tide was dominant in Osaka Bay, but the non-diatom red tide was dominant in early 1990s. Therefore, the material cycling in Yodo River estuary in Osaka Bay during August from 1991 to 2000 was analyzed by using the numerical ecosystem model and field observation data to clarify the reasons of change in red tide species. Year-to-year variation in calculated concentration ratio of diatom to non-diatom corresponds to the variation in observed ratio of red tide days of diatom to non-diatom. Limiting nutrient of primary production is phosphate over the period. Diatom dominated from 1991 to 1993, but it was difficult for non-diatom to grow due to the limitation by physical condition. Non-diatom was able to grow because of good physical and nutrient conditions from 1994 to 1996. And diatom dominated again under the good physical condition, and phosphorus supply was not enough for non-diatom to grow from 1998 to 2000. Phosphate concentration in the lower layer of Yodo River estuary was important to the variation in red tide species in the upper layer of Yodo River estuary.

Size Matters: The Contribution of Mega-Infauna to the Food ...

EPA Pesticide Factsheets

Large-bodied, invertebrates are common to infaunal communities of NE Pacific estuaries (e.g., bivalves, polychaetes, burrowing shrimps), but their contribution to the ecological structure, function and ecosystem services of most estuaries has been poorly characterized because they are difficult to sample and quantify. In a study of Yaquina estuary (Oregon) food webs, particular effort was made to quantify intertidal and subtidal mega-infauna using suction-excavated 40-cm diameter corers in addition to conventional sampling of macro-infauna. Additionally, the abundance and biomass of all floral and other faunal guilds (except microbial and mammalian guilds) were directly quantified or estimated from published studies, carbon and nitrogen stable isotopes were measured for abundant species, and inverse analysis was used to generate models of carbon flow within food webs of the lower and upper reaches of Yaquina estuary. Benthic invertebrates dominated the biomass and respiration among faunal guilds in both estuarine reaches, whereas biomass and respiration of birds and fish were two orders-of-magnitude smaller. Mega-infauna, particularly intertidal burrowing shrimps and bivalves, constituted most of the benthic invertebrate biomass, respiration and secondary production in both reaches, although only a small fraction of the total infaunal abundance. Mega-infauna were dominant consumers of phytoplankton, major contributors of carbon to sediment organic matter, a

Environmental drivers of dissolved organic matter molecular composition in the Delaware Estuary

NASA Astrophysics Data System (ADS)

Osterholz, Helena; Kirchman, David L.; Niggemann, Jutta; Dittmar, Thorsten

2016-11-01

Estuaries as connectors of freshwater and marine aquatic systems are hotspots of biogeochemical element cycling. In one of the best studied temperate estuaries, the Delaware Estuary (USA), we investigated the variability of dissolved organic matter (DOM) over five sampling cruises along the salinity gradient in August and November of 3 consecutive years. Dissolved organic carbon (DOC) concentrations were more variable in the upper reaches of the estuary (245±49 µmol L-1) than at the mouth of the estuary (129±14 µmol L-1). Bulk DOC decreased conservatively along the transect in November but was non-conservative with increased DOC concentrations mid-estuary in August. Detailed analysis of the solid-phase extractable DOM pool via ultrahigh resolution mass spectrometry (Fourier-transform ion cyclotron resonance mass spectrometry, FT-ICR-MS) revealed compositional differences at the molecular level that were not reflected in changes in concentration. Besides the mixing of terrestrial and marine endmember signatures, river discharge levels and biological activity were found to impact DOM molecular composition. DOM composition changed less between August and November than along the salinity gradient. Relative contributions of presumed photolabile DOM compounds did not reveal non-conservative behavior indicative of photochemical processing; suggesting that on the timescales of estuarine mixing photochemical removal of molecules plays a minor role in the turbid Delaware Bay. Overall, a large portion of molecular formulae overlapped between sampling campaigns and persisted during estuarine passage. Extending the analysis to the structural level via the fragmentation of molecular masses in the FT-ICR-MS cell, we found that the relative abundance of isomers along the salinity gradient did not change, indicating a high structural similarity of aquatic DOM independent of the origin. These results point towards a recalcitrant character of the DOM supplied by the Delaware River. We demonstrate that in addition to bulk DOC quantification, detailed information on molecular composition is essential for constraining sources of DOM and to identify the processes that impact estuarine DOM, thereby controlling amount and composition of DOM eventually discharged to the ocean through estuaries.

Predicted eelgrass response to sea level rise and its availability to foraging Black Brant in Pacific coast estuaries.

PubMed

Shaughnessy, Frank J; Gilkerson, Whelan; Black, Jeffrey M; Ward, David H; Petrie, Mark

2012-09-01

Managers need to predict how animals will respond to habitat redistributions caused by climate change. Our objective was to model the effects of sea level rise on total eelgrass (Zostera marina) habitat area and on the amount of that area that is accessible to Brant geese (Branta bernicla), specialist grazers of eelgrass. Digital elevation models were developed for seven estuaries from Alaska, Washington, California (USA), and Mexico. Scenarios of future total eelgrass area were derived from combinations of estuarine specific sediment and tectonic rates (i.e., bottom change rate) with three rates of eustatic sea level rise (ESLR). Percentages of total eelgrass areas that were accessible to foraging Brant were determined for December when the birds overwinter at more southerly sites and in April as they move north to sites where they build body stores on their way to nesting areas in Alaska. The modeling showed that accessible eelgrass area could be lower than total area due to how daytime low-tide height, eelgrass shoot length, and the upper elevation of eelgrass determined Brant-reaching depth. Projections of future eelgrass area indicated that present-day ESLR (2.8 mm/yr) and bottom change rates should sustain the current pattern of estuarine use by Brant except in Morro Bay, where use should decrease because eelgrass is being ejected from this estuary by a positive bottom change rate. Higher ESLR rates (6.3 and 12.7 mm/yr) should result in less Brant use of estuaries at the northern and southern ends of the flyway, particularly during the winter, but more use of mid-latitude estuaries. The capacity of mid-latitude estuaries to function as Brant feeding refugia, or for these estuaries and Izembek Lagoon to provide drift rather than attached leaves, is eventually limited by the decrease in total eelgrass area, which is a result of a light extinction affect on the eelgrass, or the habitat being pushed out of the estuary by positive tectonic rates. Management responses are limited to the increase or decrease of sediment supply and the relocation of levees to allow for upslope migration of eelgrass habitat.

Predicted eelgrass response to sea level rise and its availability to foraging Black Brant in Pacific coast estuaries

USGS Publications Warehouse

Shaughnessy, Frank J.; Gilkerson, Whelan; Black, Jeffrey M.; Ward, David H.; Petrie, Mark

2012-01-01

Managers need to predict how animals will respond to habitat redistributions caused by climate change. Our objective was to model the effects of sea level rise on total eelgrass (Zostera marina) habitat area and on the amount of that area that is accessible to Brant geese (Branta bernicla), specialist grazers of eelgrass. Digital elevation models were developed for seven estuaries from Alaska, Washington, California (USA), and Mexico. Scenarios of future total eelgrass area were derived from combinations of estuarine specific sediment and tectonic rates (i.e., bottom change rate) with three rates of eustatic sea level rise (ESLR). Percentages of total eelgrass areas that were accessible to foraging Brant were determined for December when the birds overwinter at more southerly sites and in April as they move north to sites where they build body stores on their way to nesting areas in Alaska. The modeling showed that accessible eelgrass area could be lower than total area due to how daytime low-tide height, eelgrass shoot length, and the upper elevation of eelgrass determined Brant-reaching depth. Projections of future eelgrass area indicated that present-day ESLR (2.8 mm/yr) and bottom change rates should sustain the current pattern of estuarine use by Brant except in Morro Bay, where use should decrease because eelgrass is being ejected from this estuary by a positive bottom change rate. Higher ESLR rates (6.3 and 12.7 mm/yr) should result in less Brant use of estuaries at the northern and southern ends of the flyway, particularly during the winter, but more use of mid-latitude estuaries. The capacity of mid-latitude estuaries to function as Brant feeding refugia, or for these estuaries and Izembek Lagoon to provide drift rather than attached leaves, is eventually limited by the decrease in total eelgrass area, which is a result of a light extinction affect on the eelgrass, or the habitat being pushed out of the estuary by positive tectonic rates. Management responses are limited to the increase or decrease of sediment supply and the relocation of levees to allow for upslope migration of eelgrass habitat.

Transport of Riverine Material From Multiple Rivers in the Chesapeake Bay: Important Control of Estuarine Circulation on the Material Distribution

NASA Astrophysics Data System (ADS)

Du, Jiabi; Shen, Jian

2017-11-01

Driven by estuarine circulation, material released from lower Chesapeake Bay tributaries has the potential to be transported to the upper Bay. How far and what fraction of the material from tributaries can be carried to the upper estuary have not been quantitatively investigated. For an estuary system with multiple tributaries, the relative contribution from each tributary can provide valuable information for source assessment and fate prediction for riverine materials and passive moving organisms. We conducted long-term numerical simulations using multiple passive tracers that are independently released in the headwater of five main rivers (i.e., Susquehanna, Potomac, Rappahannock, York, and James Rivers) and calculated the relative contribution of each river to the total material in the mainstem. The results show that discharge from Susquehanna River exerts the dominant control on the riverine material throughout the entire mainstem. Despite the smaller contribution from the lower-middle Bay tributaries to the total materials in the mainstem, materials released from these rivers have a high potential to be transported to the middle-upper Bay through the bottom inflow by the persistent estuarine circulation. The fraction of the tributary material transported to the upper Bay depends on the location of the tributary. Materials released near the mouth are subject to a rapid flushing process, small retention time, and strong shelf current. Our results reveal three distinct spatial patterns for materials released from the main river, tributary, and coastal oceans. This study highlights the important control of estuarine circulation over horizontal and vertical distributions of materials in the mainstem.

Health of white sucker within the St. Louis River area of concern associated with habitat usage as assessed using stable isotopes

USGS Publications Warehouse

Blazer, V.S.; Hoffman, J.; Walsh, H.L.; Braham, R.P.; Hahn, C.; Collins, P.; Jorgenson, Z.; Ledder, T.

2014-01-01

In Spring 2011, 200 adult white sucker were collected in four areas of the St. Louis River area of concern (AOC), located in Minnesota and Wisconsin, USA. The areas included the upper AOC as a reference area, the upper estuary, St. Louis Bay and Superior Bay. Grossly visible abnormalities were documented and preserved for microscopic analyses, as were five to eight representative pieces of liver tissue. A piece of dorsal muscle was preserved for stable isotope analyses and otoliths removed for age determination. The incidence of raised skin lesions (mucoid plaques) was high (31 %), however, microscopically only 4.5 % of the white suckers had neoplasia (papillomas). The remaining lesions were epidermal hyperplasia. Superior Bay had the lowest percentage of skin/lip lesions (10 %), while St. Louis Bay had the highest (44 %). St. Louis Bay also had the highest incidence of skin neoplasms (12 %). No hepatocellular neoplasms were documented, however bile duct tumors were observed in 4.5 % of the suckers. Foci of cellular alteration were observed in fish from all sites except the upper AOC. Stable isotope data indicated that most of the suckers relied on the St. Louis River AOC for the majority (>75 %) of their diet, indicating they were resident within the AOC and not in Lake Superior. The amount of diet obtained from the upper estuary was a significant predictor of skin lesion incidence. Hence, habitat use within the AOC appears to be an important risk factor for skin and possibly, liver lesions.

Health of white sucker within the St. Louis River area of concern associated with habitat usage as assessed using stable isotopes.

PubMed

Blazer, V S; Hoffman, J; Walsh, H L; Braham, R P; Hahn, C; Collins, P; Jorgenson, Z; Ledder, T

2014-03-01

In Spring 2011, 200 adult white sucker were collected in four areas of the St. Louis River area of concern (AOC), located in Minnesota and Wisconsin, USA. The areas included the upper AOC as a reference area, the upper estuary, St. Louis Bay and Superior Bay. Grossly visible abnormalities were documented and preserved for microscopic analyses, as were five to eight representative pieces of liver tissue. A piece of dorsal muscle was preserved for stable isotope analyses and otoliths removed for age determination. The incidence of raised skin lesions (mucoid plaques) was high (31 %), however, microscopically only 4.5 % of the white suckers had neoplasia (papillomas). The remaining lesions were epidermal hyperplasia. Superior Bay had the lowest percentage of skin/lip lesions (10 %), while St. Louis Bay had the highest (44 %). St. Louis Bay also had the highest incidence of skin neoplasms (12 %). No hepatocellular neoplasms were documented, however bile duct tumors were observed in 4.5 % of the suckers. Foci of cellular alteration were observed in fish from all sites except the upper AOC. Stable isotope data indicated that most of the suckers relied on the St. Louis River AOC for the majority (>75 %) of their diet, indicating they were resident within the AOC and not in Lake Superior. The amount of diet obtained from the upper estuary was a significant predictor of skin lesion incidence. Hence, habitat use within the AOC appears to be an important risk factor for skin and possibly, liver lesions.

Quantifying the environmental impacts of artisanal fishing gear on Kenya's coral reef ecosystems.

PubMed

Mangi, S C; Roberts, C M

2006-12-01

The environmental impacts of artisanal fishing gear on coral reef ecosystems were studied in the multi-gear fishery of southern Kenya to evaluate which types of gear have the greatest impact on coral reef biodiversity. The gear types studied were large and small traps, gill nets, beach seines, hand lines and spear guns. Levels of coral damage, proportion of juvenile fish and discards, size and maturity stage at first capture were quantified and compared amongst the gear types. Results indicate that fishers using beach seines, spears and gill nets cause the most direct physical damage to corals. Spear fishers showed the highest number of contacts to live corals per unit catch followed by fishers using gill nets (12.6+/-1.8 and 5.9+/-2.0 coral contacts per kg fish caught per trip respectively). Apart from discarding 6.5% of their daily catch in the sea, as it was too small, beach seine fishers also landed the highest percentage of juvenile fish (68.4+/-15.7%), a proportion significantly higher (p<0.001) than in any other gear. The size and maturity stage at first capture for 150 of 195 species caught by all gear types was well below the lengths at which they mature. For example, 100% of Lethrinus xanthochilus, 99% of Lethrinus nebulosus and 94% of Lethrinus harak caught were juveniles. Across all gear types, 50.1+/-22.7% of the catch consisted of juvenile fish, indicating serious growth overfishing. Field assessment of levels of coral density showed that fishing grounds where beach seines were still in use had a significantly lower density than where beach seining was not used. This correlation is likely to arise in part because seines cannot be used in the most coral rich areas, and in part because coral loss is a consequence of seine use. On a per gear basis therefore, beach seines had the most impact on coral reef biodiversity. This study emphasizes the need to enforce restrictions on destructive gear and mesh sizes.

Population ecology and habitat preferences of juvenile flounder Platichthys flesus (Actinopterygii: Pleuronectidae) in a temperate estuary

NASA Astrophysics Data System (ADS)

Souza, Allan T.; Dias, Ester; Nogueira, Ana; Campos, Joana; Marques, João C.; Martins, Irene

2013-05-01

The European flounder Platichthys flesus is a widely distributed epibenthic species and an important component of demersal fish assemblages in the European Atlantic coastal waters. In Portuguese estuaries, this species reaches high densities, especially in Minho estuary (NW Iberian Peninsula, Europe), potentially playing an important role in the system's ecology. In this context, the population structure, production and the habitat use of juvenile P. flesus were investigated. Sampling took place monthly, from February 2009 until July 2010 along the entire estuarine gradient (5 sampling stations distributed in the first 29 km from the river mouth, with S1 located near the river mouth, S2 inside a salt marsh, S3 in a salinity transition zone, while S4 and S5 were located in the upper estuary). Flounder's density varied significantly among sampling stations and seasons (two-way PERMANOVA: p < 0.001), with the majority of the individuals being found during the spring (30.1%) and in S3 and S4 (72.6%). Males and females presented an even distribution, with a higher proportion of males observed during summer. Fish length also differed among sampling stations and seasons (two-way PERMANOVA: p < 0.001), with larger fishes being found in S1 during the autumn (168.50 ± 59.50 mm) and the smallest in S4 during the spring (33.80 ± 3.12 mm). Size classes associated differently with environmental variables, with larger juveniles being more abundant in the downstream areas of the estuary, whereas smaller juveniles were related to higher water temperatures, suggesting a habitat segregation of P. flesus of different sizes. The fish condition of P. flesus in Minho estuary was higher than in other systems, probably due to the dominance of juveniles on the population. Also, the densities found in this estuary were up to 32 times higher than in other locations, suggesting that Minho estuary is an important nursery area for the species. The estimated secondary production of P. flesus was lower than previous studies acknowledged in the system (0.037 g.WWm- 2.year- 1), indicating that the production estimates of this species in estuaries can vary considerably depending on of several factors such as the sampling year and strategy, population and fish size.

78 FR 24382 - Endangered and Threatened Species; Take of Anadromous Fish

Federal Register 2010, 2011, 2012, 2013, 2014

2013-04-25

... using beach seines (in mainstem habitat), pole seines (inside restoration site prior to breaching), and... on various Chinook tissues to help identify gene pathways and develop robust diagnostic indices for...

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bottom, Daniel L.; Simenstad, Charles A.; Campbell, Lance

In 2002 with support from the U.S. Army Corps of Engineers (USACE), an interagency research team began investigating salmon life histories and habitat use in the lower Columbia River estuary to fill significant data gaps about the estuary's potential role in salmon decline and recovery . The Bonneville Power Administration (BPA) provided additional funding in 2004 to reconstruct historical changes in estuarine habitat opportunities and food web linkages of Columbia River salmon (Onchorhynchus spp.). Together these studies constitute the estuary's first comprehensive investigation of shallow-water habitats, including selected emergent, forested, and scrub-shrub wetlands. Among other findings, this research documented themore » importance of wetlands as nursery areas for juvenile salmon; quantified historical changes in the amounts and distributions of diverse habitat types in the lower estuary; documented estuarine residence times, ranging from weeks to months for many juvenile Chinook salmon (O. tshawytscha); and provided new evidence that contemporary salmonid food webs are supported disproportionately by wetland-derived prey resources. The results of these lower-estuary investigations also raised many new questions about habitat functions, historical habitat distributions, and salmon life histories in other areas of the Columbia River estuary that have not been adequately investigated. For example, quantitative estimates of historical habitat changes are available only for the lower 75 km of the estuary, although tidal influence extends 217 km upriver to Bonneville Dam. Because the otolith techniques used to reconstruct salmon life histories rely on detection of a chemical signature (strontium) for salt water, the estuarine residency information we have collected to date applies only to the lower 30 or 35 km of the estuary, where fish first encounter ocean water. We lack information about salmon habitat use, life histories, and growth within the long tidal-fresh reaches of the main-stem river and many tidally-influenced estuary tributaries. Finally, our surveys to date characterize wetland habitats within island complexes distributed in the main channel of the lower estuary. Yet some of the most significant wetland losses have occurred along the estuary's periphery, including shoreline areas and tributary junctions. These habitats may or may not function similarly as the island complexes that we have surveyed to date. In 2007 we initiated a second phase of the BPA estuary study (Phase II) to address specific uncertainties about salmon in tidal-fresh and tributary habitats of the Columbia River estuary. This report summarizes 2007 and 2008 Phase II results and addresses three principal research questions: (1) What was the historic distribution of estuarine and floodplain habitats from Astoria to Bonneville Dam? (2) Do individual patterns of estuarine residency and growth of juvenile Chinook salmon vary among wetland habitat types along the estuarine tidal gradient? (3) Are salmon rearing opportunities and life histories in the restoring wetland landscape of lower Grays River similar to those documented for island complexes of the main-stem estuary? Phase II extended our analysis of historical habitat distribution in the estuary above Rkm 75 to near Bonneville Dam. For this analysis we digitized the original nineteenth-century topographic (T-sheets) and hydrographic (H-sheets) survey maps for the entire estuary. Although all T-sheets (Rkm 0 to Rkm 206) were converted to GIS in 2005 with support for the USACE estuary project, final reconstruction of historical habitats throughout the estuary requires completion of the remaining H-sheet GIS maps above Rkm 75 and their integration with the T-sheets. This report summarizes progress to date on compiling the upper estuary H-sheets above Rkm 75. For the USACE estuary project, we analyzed otoliths from Chinook salmon collected near the estuary mouth in 2003-05 to estimate variability in estuary residence times among juvenile out migrants. In Phase II we expanded these analyses to compare growth and residency among individuals collected in tidal-fresh water wetlands of the lower main-stem estuary. Although no known otolith structural or chemical indicators currently exist to define entry into tidal fresh environments, our previous analyses indicate that otolith barium concentrations frequently increase before individuals encounter salt water. Here we evaluate whether otolith barium levels may provide a valid indicator of tidal fresh water entry by Columbia River Chinook salmon. We also examine otolith growth increments to quantify and compare recent (i.e., the previous 30 d) growth rates among individuals sampled in different wetland habitats along the estuarine tidal gradient.« less

Longitudinal variation in lateral trapping of fine sediment in tidal estuaries: observations and a 3D exploratory model

NASA Astrophysics Data System (ADS)

Chen, Wei; de Swart, Huib E.

2018-03-01

This study investigates the longitudinal variation of lateral entrapment of suspended sediment, as is observed in some tidal estuaries. In particular, field data from the Yangtze Estuary are analysed, which reveal that in one cross-section, two maxima of suspended sediment concentration (SSC) occur close to the south and north sides, while in a cross-section 2 km down-estuary, only one SSC maximum on the south side is present. This pattern is found during both spring tide and neap tide, which are characterised by different intensities of turbulence. To understand longitudinal variation in lateral trapping of sediment, results of a new three-dimensional exploratory model are analysed. The hydrodynamic part contains residual flow due to fresh water input, density gradients and Coriolis force and due to channel curvature-induced leakage. Moreover, the model includes a spatially varying eddy viscosity that accounts for variation of intensity of turbulence over the spring-neap cycle. By imposing morphodynamic equilibrium, the two-dimensional distribution of sediment in the domain is obtained analytically by a novel procedure. Results reveal that the occurrence of the SSC maxima near the south side of both cross-sections is due to sediment entrapment by lateral density gradients, while the second SSC maximum near the north side of the first cross-section is by sediment transport due to curvature-induced leakage. Coriolis deflection of longitudinal flow also contributes the trapping of sediment near the north side. This mechanism is important in the upper estuary, where the flow due to lateral density gradients is weak.

Tracing the origin of the oxygen-consuming organic matter in the hypoxic zone in a large eutrophic estuary: the lower reach of the Pearl River Estuary, China

NASA Astrophysics Data System (ADS)

Su, Jianzhong; Dai, Minhan; He, Biyan; Wang, Lifang; Gan, Jianping; Guo, Xianghui; Zhao, Huade; Yu, Fengling

2017-09-01

We assess the relative contributions of different sources of organic matter, marine vs. terrestrial, to oxygen consumption in an emerging hypoxic zone in the lower Pearl River Estuary (PRE), a large eutrophic estuary located in Southern China. Our cruise, conducted in July 2014, consisted of two legs before and after the passing of Typhoon Rammasun, which completely de-stratified the water column. The stratification recovered rapidly, within 1 day after the typhoon. We observed algal blooms in the upper layer of the water column and hypoxia underneath in bottom water during both legs. Repeat sampling at the initial hypoxic station showed severe oxygen depletion down to 30 µmol kg-1 before the typhoon and a clear drawdown of dissolved oxygen after the typhoon. Based on a three endmember mixing model and the mass balance of dissolved inorganic carbon and its isotopic composition, the δ13C of organic carbon remineralized in the hypoxic zone was -23.2 ± 1.1 ‰. We estimated that 65 ± 16 % of the oxygen-consuming organic matter was derived from marine sources, and the rest (35 ± 16 %) was derived from the continent. In contrast to a recently studied hypoxic zone in the East China Sea off the Changjiang Estuary where marine organic matter dominated oxygen consumption, here terrestrial organic matter significantly contributed to the formation and maintenance of hypoxia. How varying amounts of these organic matter sources drive oxygen consumption has important implications for better understanding hypoxia and its mitigation in bottom waters.

Use of sedimentary metals to predict metal concentrations in black mussel (Mytilus galloprovincialis) tissue and risk to human health (Sydney estuary, Australia).

PubMed

Birch, G F; Apostolatos, C

2013-08-01

Filter-feeding bivalves have been used extensively as an indicator of ecosystem condition and in management of estuarine environments. The current study aimed to determine whether sedimentary metals could predict metal concentrations in tissue of filter-feeding mussels (Mytilus galloprovincialis) and to identify areas of the estuary where mussel consumption posed a human health risk. Mussel tissue Cu and Zn concentrations (wet weight) were below guideline values for human consumption in all parts of the waterway, whereas Pb tissue concentrations exceed these guidelines (2.0 μg g(-1) wet weight) in the upper reaches of some embayments of the estuary. Concentrations of Cu and Pb in the fine fraction (<62.5 μm) of bottom sediment reasonably predicted concentrations (dry weight) of these metals in mussel tissue (r (2) =0.460 and p=0.001 and r (2) =0.669 and p<0.0001, respectively) as these materials are resuspendable and available to filter-feeding estuarine animals, whereas total sediment and mussel tissue were poorly related. Lead concentrations (>350 μg g(-1)) in fine sediments indicated areas of this estuary where human health was at risk due to high tissue concentrations of this metal. These results give encouragement for the use of the metal concentration in fine sediments as an indicator of estuarine condition and risk to human health in this waterway. Mussels were distributed in all parts of the estuary, even in areas where metal concentrations exceeded sediment quality guidelines.

1993 annual status report: a summary of fish data in six reaches of the upper Mississippi River system

USGS Publications Warehouse

Gutreuter, Steve; Burkhardt, Randy W.; Stopyro, Mark; Bartels, Andrew; Kramer, Eric; Bowler, Melvin C.; Cronin, Frederick A.; Soergel, Dirk W.; Petersen, Michael D.; Herzog, David P.; Raibley, Paul T.; Irons, Kevin S.; O'Hara, Timothy M.

1997-01-01

The Long Term Resource Monitoring Program (LTRMP) completed 1,994 collections of fishes from stratified random and permanently fixed sampling locations in six study reaches of the Upper Mississippi River System during 1993. Collection methods included day and night electrofishing, hoop netting, fyke netting (two net sizes), gill netting, seining, and trawling in select aquatic area classes. The six LTRMP study reaches are Pools 4 (excluding Lake Pepin), 8, 13, and 26 of the Upper Mississippi River, an unimpounded reach of the Mississippi River near Cape Girardeau, Missouri, and the La Grange Pool of the Illinois River. A total of 62-78 fish species were detected in each study reach. For each of the six LTRMP study reaches, this report contains summaries of: (1) sampling efforts in each combination of gear type and aquatic area class, (2) total catches of each species from each gear type, (3) mean catch-per-unit of gear effort statistics and standard errors for common species from each combination of aquatic area class and selected gear type, and (4) length distributions of common species from selected gear types.

1994 annual status report: a summary of fish data in six reaches of the upper Mississippi River system

USGS Publications Warehouse

Gutreuter, Steve; Burkhardt, Randy W.; Stopyro, Mark; Bartels, Andrew; Kramer, Eric; Bowler, Melvin C.; Cronin, Frederick A.; Soergel, Dirk W.; Petersen, Michael D.; Herzog, David P.; Raibley, Paul T.; Irons, Kevin S.; O'Hara, Timothy M.

1997-01-01

The Long Term Resource Monitoring Program (LTRMP) completed 2,653 collections of fishes from stratified random and permanently fixed sampling locations in six study reaches of the Upper Mississippi River System during 1994. Collection methods included day and night electrofishing, hoop netting, fyke netting (two net sizes), gill netting, seining, and trawling in select aquatic area classes. The six LTRMP study areas are Pools 4 (excluding Lake Pepin), 8, 13, and 26 of the Upper Mississippi River, and unimpounded reach of the Mississippi River near Cape Girardeau, Missouri, and the La Grange Pool of the Illinois River. A total of 61-79 fish species were detected in each study area. For each of the six LTRMP study areas, this report contains summaries of (1) sampling efforts in each combination of gear type and aquatic area class, (2) total catches of each species from each gear type, (3) mean catch-per-unit of gear effort statistics and standard errors for common species from each combination of aquatic area class and selected gear type, and (4) length distributions of common species from selected gear types.

Bioerosion and encrustation: Evidences from the Middle ‒ Upper Jurassic of central Saudi Arabia

NASA Astrophysics Data System (ADS)

El-Hedeny, Magdy; El-Sabbagh, Ahmed; Al Farraj, Saleh

2017-10-01

The Middle ‒ Upper Jurassic hard substrates of central Saudi Arabia displayed considerable signs of bioerosion and encrustations. They include organic (oysters, other bivalves, gastropods, corals and brachiopods) and an inorganic carbonate hardground that marks the boundary between the Middle Jurassic Tuwaiq Mountain Limestone and the Upper Jurassic Hanifa Formation. Traces of bioerosion in organic substrates include seven ichnotaxa produced by bivalves (Gastrochaenolites Leymerie, 1842), polychaete annelids (Trypanites Mägdefrau, 1932; MaeandropolydoraVoigt, 1965 and CaulostrepsisClarke, 1908), sponges (Entobia Bronn, 1837), acrothoracican cirripedes (Rogerella Saint-Seine, 1951), gastropods (Oichnus Bromley, 1981) and probable ?Centrichnus cf. eccentricus. The encrusting epifauna on these substrates consist of several organisms, including oysters, serpulid worms, corals and foraminifera. In contrast, the carbonate hardground was only bioeroded by Gastrochaenolite, Trypanites and Entobia. Epibionts on this hardground include ;Liostrea Douvillé, 1904-type; oysters, Nanogyra nana Sowerby, 1822 and serpulids. In general, bioerosion and encrustation are less diversified in hardground than in organic substrates, indicating a long time of exposition of organic substrates with slow to moderate rate of deposition in a restricted marine environment. Both organic and inorganic commuinities are correlated with those of other equatorial, subtropical and temperate equivalents.

Estuary ecosystem restoration: implementing and institutionalizing adaptive management: Institutionalizing adaptive management

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ebberts, Blaine D.; Zelinsky, Ben D.; Karnezis, Jason P.

We successfully implemented and institutionalized an adaptive management (AM) process for the Columbia Estuary Ecosystem Restoration Program, which is a large-scale restoration program focused on improving ecosystem conditions in the 234-km lower Columbia River and estuary. For our purpose, “institutionalized” means the AM process and restoration program are embedded in the work flow of the implementing agencies and affected parties. While plans outlining frameworks, processes, or approaches to AM of ecosystem restoration programs are commonplace, establishment for the long term is not. This paper presents the basic AM framework and explains how AM was implemented and institutionalized. Starting with amore » common goal, we pursued included a well-understood governance and decision-making structure, routine coordination and communication activities, data and information sharing, commitment from partners and upper agency management to the AM process, and meaningful cooperation among program managers and partners. The overall approach and steps to implement and institutionalize AM for ecosystem restoration explained here are applicable to situations where it has been less than successful or, as in our case, the restoration program is just getting started.« less

Estimating juvenile Chinook salmon (Oncorhynchus tshawytscha) abundance from beach seine data collected in the Sacramento–San Joaquin Delta and San Francisco Bay, California

USGS Publications Warehouse

Perry, Russell W.; Kirsch, Joseph E.; Hendrix, A. Noble

2016-06-17

Resource managers rely on abundance or density metrics derived from beach seine surveys to make vital decisions that affect fish population dynamics and assemblage structure. However, abundance and density metrics may be biased by imperfect capture and lack of geographic closure during sampling. Currently, there is considerable uncertainty about the capture efficiency of juvenile Chinook salmon (Oncorhynchus tshawytscha) by beach seines. Heterogeneity in capture can occur through unrealistic assumptions of closure and from variation in the probability of capture caused by environmental conditions. We evaluated the assumptions of closure and the influence of environmental conditions on capture efficiency and abundance estimates of Chinook salmon from beach seining within the Sacramento–San Joaquin Delta and the San Francisco Bay. Beach seine capture efficiency was measured using a stratified random sampling design combined with open and closed replicate depletion sampling. A total of 56 samples were collected during the spring of 2014. To assess variability in capture probability and the absolute abundance of juvenile Chinook salmon, beach seine capture efficiency data were fitted to the paired depletion design using modified N-mixture models. These models allowed us to explicitly test the closure assumption and estimate environmental effects on the probability of capture. We determined that our updated method allowing for lack of closure between depletion samples drastically outperformed traditional data analysis that assumes closure among replicate samples. The best-fit model (lowest-valued Akaike Information Criterion model) included the probability of fish being available for capture (relaxed closure assumption), capture probability modeled as a function of water velocity and percent coverage of fine sediment, and abundance modeled as a function of sample area, temperature, and water velocity. Given that beach seining is a ubiquitous sampling technique for many species, our improved sampling design and analysis could provide significant improvements in density and abundance estimation.

Variation in capture efficiency of a beach seine for small fishes

USGS Publications Warehouse

Parsley, M.J.; Palmer, D.E.; Burkhardt, R.W.

1989-01-01

We determined the capture efficiency of a beach seine as a means of improving abundance estimates of small fishes in littoral areas. Capture efficiency for 14 taxa (individual species or species groups) was determined by seining within an enclosure at night over fine and coarse substrates in the John Day Reservoir, Oregon–Washington. Mean efficiency ranged from 12% for prickly sculpin Cottus asper captured over coarse substrates to 96% for peamouth Mylocheilus caurinus captured over fine substrates. Mean capture efficiency for a taxon (genus or species) was generally higher over fine substrates than over coarse substrates, although mean capture efficiencies over fine substrates were significantly greater for only 3 of 10 taxa. Capture efficiency generally was not influenced by fish density or by water temperature (range, 8–26°C). Conclusions about the relative abundance of taxa captured by seining can change substantially after capture efficiencies are taken into account.

Estuarine Larval Development and Upstream Post-Larval Migration of Freshwater Shrimps in Two Tropical Rivers of Puerto Rico

Treesearch

Jonathan P. Benstead; James G. March; Catherine M. Pringle

2000-01-01

Migratory freshwater shrimps represent important links between the headwaters and estuaries of many tropical rivers. These species exhibit amphidromous life cycles in which larvae are released by females in upper reaches of rivers; first stage (i.e., newly hatched) larvae drift passively to coastal environments where they develop and metamorphose into postlarvae...

ERTS-1 observations of sea surface circulation and sediment transport, Cook Inlet, Alaska

NASA Technical Reports Server (NTRS)

Wright, F. F.; Sharma, G. D.; Burbank, D. C.

1973-01-01

Cook Inlet is a large tide-dominated estuary in southern Alaska. Highly turbid streams enter the upper inlet, providing an excellent tracer for circulation in the lower inlet. MSS 4 and 5 images both can be used in this area to plot sediment and pollutant trajectories, areas of (probable) commercial fish concentration, and the entire circulation regime.

50 CFR 300.24 - Prohibitions.

Code of Federal Regulations, 2014 CFR

2014-10-01

... required in § 300.22(a). (w) Set or attempt to set a purse seine on or around a whale shark (Rhincodon typus) in contravention of § 300.25(e)(5). (x) Fail to release a whale shark encircled in a purse seine...

Chinook salmon and green sturgeon migrate through San Francisco Estuary despite large distortions in the local magnetic field produced by bridges

PubMed Central

Wyman, Megan T.; Kavet, Robert

2017-01-01

Empirical evidence exists that some marine animals perceive and orient to local distortions in the earth’s main static geomagnetic field. The magnetic fields produced by undersea electric power cables that carry electricity from hydrokinetic energy sources to shore-based power stations may produce similar local distortions in the earth’s main field. Concerns exist that animals migrating along the continental shelves might orient to the magnetic field from the cables, and move either inshore or offshore away from their normal path. We have studied the effect of the Trans Bay Cable (TBC), an 85-km long, high voltage, direct current (DC) transmission line leading underwater from Pittsburg, CA to San Francisco, CA, on fishes migrating through the San Francisco Estuary. These included Chinook salmon smolts (Oncorhynchus tshawytscha) that migrate downstream through the San Francisco Estuary to the Pacific Ocean and adult green sturgeon (Acipenser medirostris), which migrate upstream from the ocean through the estuary to their spawning habitat in the upper Sacramento River and return to the ocean after spawning occurs. Based on a detailed gradiometer survey, we found that the distortions in the earth’s main field produced by bridges across the estuary were much greater than those from the Trans Bay Cable. The former anomalies exceeded the latter by an order of magnitude or more. Significant numbers of tagged Chinook salmon smolts migrated past bridges, which produced strong magnetic anomalies, to the Golden Gate Bridge, where they were recorded by dual arrays of acoustic tag-detecting monitors moored in lines across the mouth of the bay. In addition, adult green sturgeon successfully swam upstream and downstream through the estuary on the way to and from their spawning grounds. Hence, the large anomalies produced by the bridges do not appear to present a strong barrier to the natural seasonal movement patterns of salmonid smolts and adult green sturgeon. PMID:28575021

Chinook salmon and green sturgeon migrate through San Francisco Estuary despite large distortions in the local magnetic field produced by bridges.

PubMed

Klimley, A Peter; Wyman, Megan T; Kavet, Robert

2017-01-01

Empirical evidence exists that some marine animals perceive and orient to local distortions in the earth's main static geomagnetic field. The magnetic fields produced by undersea electric power cables that carry electricity from hydrokinetic energy sources to shore-based power stations may produce similar local distortions in the earth's main field. Concerns exist that animals migrating along the continental shelves might orient to the magnetic field from the cables, and move either inshore or offshore away from their normal path. We have studied the effect of the Trans Bay Cable (TBC), an 85-km long, high voltage, direct current (DC) transmission line leading underwater from Pittsburg, CA to San Francisco, CA, on fishes migrating through the San Francisco Estuary. These included Chinook salmon smolts (Oncorhynchus tshawytscha) that migrate downstream through the San Francisco Estuary to the Pacific Ocean and adult green sturgeon (Acipenser medirostris), which migrate upstream from the ocean through the estuary to their spawning habitat in the upper Sacramento River and return to the ocean after spawning occurs. Based on a detailed gradiometer survey, we found that the distortions in the earth's main field produced by bridges across the estuary were much greater than those from the Trans Bay Cable. The former anomalies exceeded the latter by an order of magnitude or more. Significant numbers of tagged Chinook salmon smolts migrated past bridges, which produced strong magnetic anomalies, to the Golden Gate Bridge, where they were recorded by dual arrays of acoustic tag-detecting monitors moored in lines across the mouth of the bay. In addition, adult green sturgeon successfully swam upstream and downstream through the estuary on the way to and from their spawning grounds. Hence, the large anomalies produced by the bridges do not appear to present a strong barrier to the natural seasonal movement patterns of salmonid smolts and adult green sturgeon.

Chinook salmon and green sturgeon migrate through San Francisco Estuary despite large distortions in the local magnetic field produced by bridges

DOE Office of Scientific and Technical Information (OSTI.GOV)

Klimley, A. Peter; Wyman, Megan T.; Kavet, Robert

Empirical evidence exists that some marine animals perceive and orient to local distortions in the earth's main static geomagnetic field. The magnetic fields produced by undersea electric power cables that carry electricity from hydrokinetic energy sources to shore-based power stations may produce similar local distortions in the earth's main field. Concerns exist that animals migrating along the continental shelves might orient to the magnetic field from the cables, and move either inshore or offshore away from their normal path. We studied the effect of the Trans Bay Cable (TBC), an 85-km long, high voltage, direct current (DC) transmission line leadingmore » underwater from Pittsburg, CA to San Francisco, CA, on fishes migrating through the San Francisco Estuary. These included Chinook salmon smolts (Oncorhynchus tshawytscha) that migrate downstream through the San Francisco Estuary to the Pacific Ocean and adult green sturgeon (Acipenser medirostris), which migrate upstream from the ocean through the estuary to their spawning habitat in the upper Sacramento River and return to the ocean after spawning occurs. And based on a detailed gradiometer survey, we found that the distortions in the earth's main field produced by bridges across the estuary were much greater than those from the Trans Bay Cable. The former anomalies exceeded the latter by an order of magnitude or more. Significant numbers of tagged Chinook salmon smolts migrated past bridges, which produced strong magnetic anomalies, to the Golden Gate Bridge, where they were recorded by dual arrays of acoustic tag-detecting monitors moored in lines across the mouth of the bay. Additionally, adult green sturgeon successfully swam upstream and downstream through the estuary on the way to and from their spawning grounds. Hence, the large anomalies produced by the bridges do not appear to present a strong barrier to the natural seasonal movement patterns of salmonid smolts and adult green sturgeon.« less

Chinook salmon and green sturgeon migrate through San Francisco Estuary despite large distortions in the local magnetic field produced by bridges

DOE PAGES

Klimley, A. Peter; Wyman, Megan T.; Kavet, Robert; ...

2017-06-02

Empirical evidence exists that some marine animals perceive and orient to local distortions in the earth's main static geomagnetic field. The magnetic fields produced by undersea electric power cables that carry electricity from hydrokinetic energy sources to shore-based power stations may produce similar local distortions in the earth's main field. Concerns exist that animals migrating along the continental shelves might orient to the magnetic field from the cables, and move either inshore or offshore away from their normal path. We studied the effect of the Trans Bay Cable (TBC), an 85-km long, high voltage, direct current (DC) transmission line leadingmore » underwater from Pittsburg, CA to San Francisco, CA, on fishes migrating through the San Francisco Estuary. These included Chinook salmon smolts (Oncorhynchus tshawytscha) that migrate downstream through the San Francisco Estuary to the Pacific Ocean and adult green sturgeon (Acipenser medirostris), which migrate upstream from the ocean through the estuary to their spawning habitat in the upper Sacramento River and return to the ocean after spawning occurs. And based on a detailed gradiometer survey, we found that the distortions in the earth's main field produced by bridges across the estuary were much greater than those from the Trans Bay Cable. The former anomalies exceeded the latter by an order of magnitude or more. Significant numbers of tagged Chinook salmon smolts migrated past bridges, which produced strong magnetic anomalies, to the Golden Gate Bridge, where they were recorded by dual arrays of acoustic tag-detecting monitors moored in lines across the mouth of the bay. Additionally, adult green sturgeon successfully swam upstream and downstream through the estuary on the way to and from their spawning grounds. Hence, the large anomalies produced by the bridges do not appear to present a strong barrier to the natural seasonal movement patterns of salmonid smolts and adult green sturgeon.« less

Tidal-Fluvial and Estuarine Processes in the Lower Columbia River: II. Water Level Models, Floodplain Wetland Inundation, and System Zones

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jay, David A.; Borde, Amy B.; Diefenderfer, Heida L.

Spatially varying water-level regimes are a factor controlling estuarine and tidal-fluvial wetland vegetation patterns. As described in Part I, water levels in the Lower Columbia River and estuary (LCRE) are influenced by tides, river flow, hydropower operations, and coastal processes. In Part II, regression models based on tidal theory are used to quantify the role of these processes in determining water levels in the mainstem river and floodplain wetlands, and to provide 21-year inundation hindcasts. Analyses are conducted at 19 LCRE mainstem channel stations and 23 tidally exposed floodplain wetland stations. Sum exceedance values (SEVs) are used to compare wetlandmore » hydrologic regimes at different locations on the river floodplain. A new predictive tool is introduced and validated, the potential SEV (pSEV), which can reduce the need for extensive new data collection in wetland restoration planning. Models of water levels and inundation frequency distinguish four zones encompassing eight reaches. The system zones are the wave- and current-dominated Entrance to river kilometer (rkm) 5; the Estuary (rkm-5 to 87), comprised of a lower reach with salinity, the energy minimum (where the turbidity maximum normally occurs), and an upper estuary reach without salinity; the Tidal River (rkm-87 to 229), with lower, middle, and upper reaches in which river flow becomes increasingly dominant over tides in determining water levels; and the steep and weakly tidal Cascade (rkm-229 to 234) immediately downstream from Bonneville Dam. The same zonation is seen in the water levels of floodplain stations, with considerable modification of tidal properties. The system zones and reaches defined here reflect geological features and their boundaries are congruent with five wetland vegetation zones« less

Late Holocene paleoseismicity, tsunamis and relative sea- level changes along the south-central Cascadia subduction zone, southern Oregon, United States of America

NASA Astrophysics Data System (ADS)

Witter, Robert Carleton

1999-10-01

This dissertation investigates stratigraphic evidence for great (M w >= 8) earthquakes, tsunamis and relative sea-level change at three coastal sites above the Cascadia subduction zone (CSZ). Accelerator mass spectrometry radiocarbon analyses, diatom analyses and vibracoring techniques were employed. Euchre Creek marsh stratigraphic sequences contain four sand beds deposited by extreme storm waves within the last 600 years and a tsunami ~300 years ago. A 150- year recurrence interval for sand deposition compared to an average recurrence interval of 500-540 years for great Cascadia, earthquakes precludes local tsunamis that accompany Cascadia earthquakes as the only candidate depositional mechanism for the sand beds. Alternatively, magnitude-frequency analyses of extreme ocean levels generated during El Niño years suggest that storm- wave runup is a more likely mechanism for sand deposition in washover settings than either locally or remotely generated tsunamis. Late Holocene stratigraphic sequences at the Coquille River estuary provide a ~6600-year record of twelve great Cascadia earthquakes and attendant tsunamis in southern Oregon. A relative sea-level history chronicles repeated sudden expansion followed by gradual emergence of the Coquille estuary in response to the earthquake cycle. The average earthquake-recurrence interval for the central CSZ (~570-590 yrs) overlaps similar estimates for northern Oregon estuaries. In contrast, more inferred earthquakes recorded at Willapa and Humboldt Bays in the last ~2000 years compared to the earthquake record at Coquille suggest that segmented rupture of the CSZ occurs. Late Holocene (since 6.3 ka) relative sea-level data generated within the Coquille estuary allow 20 m of vertical deformation across the Coquille anticline in the last 80 ky. Contrasting relative sea-level histories in southern Oregon provide evidence for late Holocene contraction on upper-plate anticlines. Two relative sea-level curves, 35 km apart, show 0.5-0.6 m/ka difference in uplift rate, although both sites demonstrate long-term tectonic uplift. Upper-plate structures above the central CSZ probably deform during megathrust events. The Cape Blanco and Coquille anticlines overlie a candidate segment boundary because they separate subduction zone segments with different earthquake histories. This dissertation includes co-authored material.

Investigating Typhoon Induced River-Surge Interactions in the Tamsui Estuary, Taiwan.

NASA Astrophysics Data System (ADS)

Maskell; J. H.; Grieser, J.; Rodney, J.; Howe, N. J.

2016-02-01

It is increasingly important to understand the combined influence of the main drivers of coastal risk due to sea level rise and the potential increase in extreme weather events. An Asian Basin stochastic typhoon set was used to force a storm surge model of Taiwan to investigate the interaction between storm surge and high river discharges (50, 100 and 200 year return period discharges) in the Tamsui River. Taiwan is a mountainous country leading to the combined risk of surge and high river discharge occurring simultaneously in estuary regions. The typhoon tracks were selected using a Hurricane Surge Index (Kantha, 2006) and cross the northern tip of Taiwan with maximum sustained winds (Vmax) between 51 m/s and 75 m/s (Cat 3-5). Peak surge elevations in the Tamsui River range from 5.7 m to 10.3 m. The surge interacts with the river flow to induce changes in the water elevation between -8 m and 4 m depending on the surge elevation and river discharge and increases the inundated area in the range 37 km to 204 km. Significant positive interactions occur in the Tamsui Estuary (Fig. 1a) but do not have implications for increased inundation and occur at the start of the flood phase and the end of the ebb phase as previously shown in idealized test cases (Maskell et al., 2013). Current vectors in the estuary show that at the time leading up to high water the river outflow starts to become dominant in the mid-channel reducing maximum water levels by up to 10% in the combined surge and river solution. However, surge inhibits downstream propagation of the flood wave in the upper river channels increasing water levels by up to 2 m. The maximum inundated area (1330 km2) is caused by the combination of defence overflow due to the maximum surge (10.27 m) and increased river levels (RP100) in the upper channels leading to significant inundation either side of the Keelung River (Fig. 1b). The Erchung floodway is effective in diverting some of the flow (up to 10,443 m3/s) reducing inundation elsewhere in the river network.

Morphological response of the saltmarsh habitats of the Guadiana estuary due to flow regulation and sea-level rise

NASA Astrophysics Data System (ADS)

Sampath, D. M. R.; Boski, T.

2016-12-01

In the context of rapid sea-level rise in the 21st century, the reduction of fluvial sediment supply due to the regulation of river discharge represents a major challenge for the management of estuarine ecosystems. Therefore, the present study aims to assess the cumulative impacts of the reduction of river discharge and projected sea-level rise on the morphological evolution of the Guadiana estuary during the 21st century. The assessment was based on a set of analytical solutions to simplified equations of tidal wave propagation in shallow waters and empirical knowledge of the system. As methods applied to estimate environmental flows do not take into consideration the fluvial discharge required to maintain saltmarsh habitats and the impact of sea-level rise, simulations were carried out for ten cases in terms of base river flow and sea-level rise so as to understand their sensitivity on the deepening of saltmarsh platforms. Results suggest saltmarsh habitats may not be affected severely in response to lower limit scenarios of sea-level rise and sedimentation. A similar behaviour can be expected even due to the upper limit scenarios until 2050, but with a significant submergence afterwards. In the case of the upper limit scenarios under scrutiny, there was a net erosion of sediment from the estuary. Multiplications of amplitudes of the base flow function by factors 1.5, 2, and 5 result in reduction of the estimated net eroded sediment volume by 25, 40, and 80%, respectively, with respect to the net eroded volume for observed river discharge. The results also indicate that defining the minimum environmental flow as a percentage of dry season flow (as done presently) should be updated to include the full spectrum of natural flows, incorporating temporal variability to better anticipate scenarios of sea-level rise during this century. As permanent submergence of intertidal habitats can be significant after 2050, due to the projected 79 cm rise of sea-level by the year 2100, a multi-dimensional approach should be adopted to mitigate the consequences of sea-level rise and strong flow regulations on the ecosystem of the Guadiana Estuary.

Comparative organic geochemistry of Indian margin (Arabian Sea) sediments: estuary to continental slope

NASA Astrophysics Data System (ADS)

Cowie, G.; Mowbray, S.; Kurian, S.; Sarkar, A.; White, C.; Anderson, A.; Vergnaud, B.; Johnstone, G.; Brear, S.; Woulds, C.; Naqvi, S. W.; Kitazato, H.

2014-02-01

Surface sediments from sites across the Indian margin of the Arabian Sea were analysed for their carbon and nitrogen compositions (elemental and stable isotopic), grain size distributions and biochemical indices of organic matter (OM) source and/or degradation state. Site locations ranged from the estuaries of the Mandovi and Zuari rivers to depths of ~ 2000 m on the continental slope, thus spanning nearshore muds and sands on the shelf and both the semi-permanent oxygen minimum zone (OMZ) on the upper slope (~ 200-1300 m) and the seasonal hypoxic zone that impinges on the shelf. Source indices showed mixed marine and terrigenous OM within the estuaries, and overwhelming predominance (80%+) of marine OM on the shelf and slope. Thus, riverine OM is heavily diluted by autochthonous marine OM and/or is efficiently remineralised within or immediately offshore of the estuaries. Any terrigenous OM that is exported appears to be retained in nearshore muds; lignin phenols indicate that the small terrigenous OM content of slope sediments is of different origin, potentially from rivers to the north. Organic C contents of surface shelf and slope sediments varied from < 0.5 wt % in relict shelf sands to over 7 wt % at slope sites within the OMZ, decreasing to ≤ 1 wt % at 2000 m. Major variability (~ 5 wt %) was found at slope sites within the OMZ of similar depth and near-identical bottom-water oxygen concentration. A strong relationship between organic C and sediment grain size was seen for sediments within the OMZ, but lower C loadings were found for sites on the shelf and below the OMZ. Diagenetic indices confirmed that lower C content below the OMZ is associated with greater extent of OM degradation, but that C-poor shelf sediments are not consistently more degraded than those within the OMZ. Together, the results indicate that OM enrichment on the upper slope can be explained by physical controls (winnowing and/or dilution) on the shelf and progressive OM degradation with increasing oxygen exposure below the OMZ. Reduced oxygen exposure may contribute to OM enrichment at some sites within the OMZ, but hydrodynamic processes are the overriding control on sediment OM distribution.

50 CFR 660.714 - Purse seine fishery. [Reserved

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Purse seine fishery. [Reserved] 660.714 Section 660.714 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE (CONTINUED) FISHERIES OFF WEST COAST STATES Highly...

50 CFR 660.714 - Purse seine fishery. [Reserved

Code of Federal Regulations, 2011 CFR

2011-10-01

... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Purse seine fishery. [Reserved] 660.714 Section 660.714 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE (CONTINUED) FISHERIES OFF WEST COAST STATES Highly...

Anthropogenic Carbon Pump in an Urbanized Estuary

NASA Astrophysics Data System (ADS)

Park, J. H.; Yoon, T. K.; Jin, H.; Begum, M. S.

2015-12-01

The importance of estuaries as a carbon source has been increasingly recognized over the recent decades. However, constraining sources of CO2 evasion from urbanized estuaries remains incomplete, particularly in densely populated river systems receiving high loads of organic carbon from anthropogenic sources. To account for major factors regulating carbon fluxes the tidal reach of the Han River estuary along the metropolitan Seoul, characterization of organic carbon in the main stem and major urban tributaries were combined with continuous, submersible sensor measurements of pCO2 at a mid-channel location over a year and continuous underway measurements using a submersible sensor and two equilibrator sytems across the estuarine section receiving urban streams. Single-site continuous measurements exhibited large seasonal and diurnal variations in pCO2, ranging from sub-ambient air levels to exceptionally high values approaching 10,000 ppm. Diurnal variations of pCO2 were pronounced in summer and had an inverse relationship with dissolved oxygen, pointing to a potential role of day-time algal consumption of CO2. Cruise measurements displayed sharp pCO2 pulses along the confluences of urban streams as compared with relatively low values along the upper estuary receiving low-CO2 outflows from upstream dams. Large downstream increases in pCO2, concurrent with increases in DOC concentrations and fluorescence intensities indicative of microbially processed organic components, imply a translocation and subsequent dilution of CO2 carried by urban streams and/or fast transformations of labile C during transit along downstream reaches. The unique combination of spatial and temporal continuous measurements of pCO2 provide insights on estuarine CO2 pulses that might have resulted from the interplay between high loads of CO2 and organic C of anthropogenic origin and their priming effects on estuarine microbial processing of terrigenous and algal organic matter.

Sedimentary framework of the Potomac River estuary, Maryland

USGS Publications Warehouse

Knebel, Harley J.; Martin, E. Ann; Glenn, J.L.; Needell, Sally W.

1981-01-01

Analyses of seismic-reflection profiles, sediment cores, grab samples, and side-scan sonar records, along with previously collected borehole data, reveal the characteristics, distribution, and geologic history of the shallow strata beneath the Potomac River estuary. The lowermost strata are sediments of the Chesapeake Group (lower Miocene to lower Pleistocene) that crop out on land near the shore but are buried as much as 40 m below the floor of the estuary. The top of these sediments is an erosional unconformity that outlines the Wisconsinan valley of the Potomac River. This valley has a sinuous trend, a flat bottom, a relief of 15 to 34 m, and axial depths of 34 to 54 m below present sea level. During the Holocene transgression of sea level, the ancestral valley was filled with as much as 40 m of sandy and silty, fluvial-to-shallow estuarine sediments. The fill became the substrate for oyster bars in the upper reach and now forms most marginal slopes of the estuary. Since sea level approached its present position (2,000 to 3,000 yr ago), the main channel has become the locus of deposition for watery, gray to black clay or silty clay, and waves and currents have eroded the heterogeneous Quaternary sediments along the margins, leaving winnowed brown sand on shallow shoreline flats. Pb-210 analyses indicate that modern mud is accumulating at rates ranging from 0.16 to 1.80 cm/yr, being lowest near the mouth and increasing toward the head of the estuary. This trend reflects an increased accumulation of fine-grained fluvial sediments near the turbidity maximum, similar to that found in nearby Chesapeake Bay. The present annual accumulation of mud is about 1.54 million metric tons; the cumulative mass is 406 million metric tons.

Potential alteration of fjordal circulation due to a large floating structure—Numerical investigation with application to Hood Canal basin in Puget Sound

DOE Office of Scientific and Technical Information (OSTI.GOV)

Khangaonkar, Tarang; Wang, Taiping

Circulation in typical fjords is characterized by a shallow brackish layer at the surface over a deep long and narrow saltwater column. This surface layer is responsible for the outflow of water from the fjord, is easily disrupted by external forces, such as wind, and is influenced by freshwater inflow. In this paper, we postulate that the stability of fjordal circulation may also be vulnerable to impacts from anthropogenic alterations, such as floating structures, that could constrict the mixing and transport in the upper layers of the water column. The potential for alteration of circulation in Hood Canal, a silled-fjordmore » located inside Puget Sound, Washington, has been examined. Using classical analytical treatments along the lines formulated by Hansen and Rattray [1965], Rattray [1967], Dyer [1973] and more recently, MacCready [2004], we develop a solution applicable to a range of estuary classifications varying from a partially mixed estuary regime to classical fjord conditions. Both estuary types exist in the Puget Sound system, and we compare our analytical solution with observed data. The analysis is based on an exponential variation of eddy viscosity with depth, and it has been extended further with modifications of the free surface boundary conditions to develop a solution representing the presence of a floating bridge at the estuary/fjord entrance. The model results show that tidally averaged mean circulation under the influence of such a constraint could reduce by as much as 30 to 50 percent. The overall water quality of fjords and narrow estuaries is dependent on net circulation and flushing. A potential decrease in residual flow or a corresponding increase in residence time of this magnitude merits further study.« less

Fish abundances in shoreline habitats and submerged aquatic vegetation in a tidal freshwater embayment of the Potomac River.

PubMed

Kraus, Richard T; Jones, R Christian

2012-05-01

Submerged aquatic vegetation (SAV) is considered an important habitat for juvenile and small forage fish species, but many long-term recruitment surveys do not effectively monitor fish communities in SAV. To better understand the impact of recent large increases of SAV on the fish community in tidal freshwater reaches of the Potomac River, we compared traditional seine sampling from shore with drop ring sampling of SAV beds (primarily Hydrilla) in a shallow water (depths, <1.5 m) embayment, Gunston Cove. To accomplish this, we developed species-specific catch efficiency values for the seine gear and calculated area-based density in both shoreline and SAV habitats in late summer of three different years (2007, 2008, and 2009). For the dominant species (Fundulus diaphanus, Lepomis macrochirus, Etheostoma olmstedi, Morone americana, Lepomis gibbosus, and Fundulus heteroclitus), density was nearly always higher in SAV, but overall, species richness was highest in shoreline habitats sampled with seines. Although historical monitoring of fish in Gunston Cove (and throughout Chesapeake Bay) is based upon seine sampling (and trawl sampling in deeper areas), the high densities of fish and larger areal extent of SAV indicated that complementary sampling of SAV habitats would produce more accurate trends in abundances of common species. Because drop ring samples cover much less area than seines and may miss rare species, a combination of methods that includes seine sampling is needed for biodiversity assessment. The resurgence of SAV in tidal freshwater signifies improving water quality, and methods we evaluated here support improved inferences about population trends and fish community structure as indicators of ecosystem condition.

Infection par le VIH chez les patientes atteintes de cancer du sein en Guinée (Afrique de l'Ouest)

PubMed Central

Traore, Bangaly; Diane, Solomana; Sow, Mamadou Saliou; Keita, Mamady; Conde, Mamoudou; Traore, Fodé Amara; Kourouma, Tidiane

2015-01-01

L'objectif était de déterminer la prévalence de l'infection à VIH chez les patientes atteintes de cancer du sein et de comparer les caractéristiques anatomocliques et thérapeutiques de ces cancers du sein par rapports aux patientes non infectées par le VIH. Il s'agissait d'une étude rétrospective et analytique comparant les dossiers de patientes atteintes de cancers du sein histologiquement confirmés, infectées ou non par le VIH à l'unité de chirurgie oncologique de Donka, CHU de Conakry, de 2007 à 2012. Nous avons colligé 278 patientes présentant un cancer du sein dont 14 (5,0%) infectées par le VIH et 264 (95,0%) non infectées par le VIH. Les différences observées entre ces deux groupes de patientes étaient respectivement: âge médian (36,8 vs 49,0 ans), la ménopause (21,4% vs 53,4%), le nombre des patientes traitées (50,0% contre 77,1%) et la survenue de décès (78,6% vs 50,8%). Aucune différence n'a été notée dans la présentation clinique, histologique et le retard de consultation. Dans notre étude, la prévalence de l'infection à VIH chez les patients atteints de cancer du sein est élevée. L’âge jeune des patients, la faible accessibilité au traitement et la mortalité élevée doivent être confirmés par une étude sur un échantillon plus large. PMID:26523196

Evaluating Local and Regional Sources of Trace Element Contamination in a Rural Sub Estuary of the Upper Chesapeake Bay

NASA Astrophysics Data System (ADS)

Krahforst, C.; Hartman, S.; Sherman, L.; Kehm, K.

2014-12-01

The distribution of trace elements (V, Cr, Co, Ni, Cu, Zn, As, Ag, Cd, Sn, Ba, W, Pb and U) along with Al and Fe and other sediment characteristics in surface sediment and sediment cores from the Chester River - a sub estuary of the Chesapeake Bay located in a predominantly agricultural watershed of Maryland's upper Eastern Shore, USA - have been determined in order to add to the understanding of contaminant transport and fate and inform management strategies designed to maintain or improve the ecological condition of estuaries. These analyses coupled with the comparison of elemental analysis of 210Pb - dated sediment cores, main stem water quality surveys, and a review of recent EPA National Coastal Condition Assessment sediment data from Chesapeake Bay provide added information about the roles of local and region scale processes on ecosystem condition. The high amount of suspended sediment in the Chester River (5-20 mg L-1) is an important factor controlling water quality conditions of the Chester River and a prime focus for environmental management of this system. Sources of suspended matter include local runoff, atmospheric deposition, local resuspension, and exchange with the Chesapeake Bay. In principle, each of these sources could be distinguished on the basis of chemical composition of surface sediment. Preliminary results from multivariate analytic models indicate that many of the elements investigated display significant covariance with Al (and other predominantly crustal signatures) which may indicate limited exogenic sources of contamination for sediments of this watershed. For example total Pb concentrations are mostly below the NOAA's low toxic effects level and lower than the median value of NCCA data for the upper Chesapeake suggesting that sediments have significant sources from within the watershed. Further, significant higher concentrations of Sn and Cu coincide with sediment collected in or near marinas and point to localized anthropogenic sources for these elements. Elemental enrichment values relative to Al of Chester River sediments are significantly lower than observations in sediments from Chesapeake Bay overall and may indicate that local watershed management strategies may be effective for improving water and habitat quality of the Chester River.

Survie au cancer du sein à Rabat (Maroc) 2005-2008

PubMed Central

Mechita, Nada Bennani; Tazi, Mohammed Adnane; Er-Raki, Abdelouahed; Mrabet, Mustapha; Saadi, Asma; Benjaafar, Noureddine; Razine, Rachid

2016-01-01

Introduction Le cancer du sein représente un problème de santé publique au Maroc. L’objectif de ce travail était d’estimer le taux de survie au cancer du sein chez les patientes habitant la ville de Rabat. Méthodes Etude pronostique réalisée chez les patientes diagnostiquées pour cancer du sein de 2005 à 2008, habitant la ville de Rabat et enregistrées au registre des cancers de Rabat. La date d’inclusion dans l’étude correspondait à la date de confirmation histologique du cancer. L’estimation de la survie a été réalisée par la méthode de Kaplan Meier, et la comparaison entre les différentes classes d’une variable a été réalisée par le test de log rank. L’étude des facteurs associés à la survie a été effectuée par le modèle de Cox. Résultats Durant la période d’étude 628 cas de cancer du sein ont été collectés. Le pourcentage de décès était de 19,9%. La survie globale à un an était de 97,1%, elle était de 89,2% à 3 ans et de 80,6 % à 5 ans. En analyse multivariée la survie au cancer du sein était statistiquement moins bonne chez les patientes âgées de plus de 70 ans (p<0,001), ayantune grande taille de tumeur (p<0,001), un stade avancé d’adénopathies (p=0,007), présentant des métastases (p<0,001) et non traitées par hormonothérapie (p=0,002). Conclusion Une grande taille de la tumeur et la présence de métastases sont des facteurs de mauvais pronostic du cancer du sein d’où la nécessité de renforcer les programmes de dépistage. PMID:28292106

Cancer du sein au Cameroun, profil histo-épidémiologique: à propos de 3044 cas

PubMed Central

Engbang, Jean Paul Ndamba; Essome, Henri; Koh, Valère Mve; Simo, Godefroy; Essam, Jean Daniel Sime; Mouelle, Albert Sone; Essame, Jean Louis Oyono

2015-01-01

Décrire les caractéristiques épidémiologiques et histo-pathologiques des tumeurs malignes du sein au Cameroun. Il s'agissait d'une étude rétrospective descriptive portant sur les tumeurs malignes du sein, colligées, dans les registres des différents laboratoires d'Anatomie Pathologique publiques et privés repartis dans cinq régions (centre, littoral, Ouest, Nord-ouest, Sud-ouest), pendant une période de 10 ans (2004-2013). Les paramètres étudiés étaient la fréquence, l’âge, le sexe, la localisation, le type et le grade histologique, et les récepteurs hormonaux. Un total de 3044 cas de cancers du sein a été recensé, soit une fréquence annuelle de 304,4 cas en moyenne. Le sexe féminin était le plus représenté avec 2971 cas (97,60%) et les hommes avec 73 cas (2,40%), soit un sexe ratio (H/F) de 0,02. L’âge moyen des patients était de 46±15,87 ans, avec des extrêmes de 13 et 95 ans. Selon la localisation, le sein gauche était atteint dans 1244 cas (52%) et le sein droit dans 1115 cas (47%). Au plan histologique, on retrouvait essentiellement des carcinomes avec 96,50% des cas, des sarcomes 1,39%, des lymphomes 1,07% et la maladie de Paget du mamelon, 1,03%. Les tumeurs épithéliales étaient infiltrantes dans 2049 cas (84,46%), avec une prédominance du carcinome canalaire infiltrant (1870 cas) et non infiltrantes dans 377 cas (15,54%). Le grade histo-pronostic de SBR avait révélé une prédominance du grade II dans 66% des cas. Les cancers du sein restent une pathologie fréquente au Cameroun et atteignent principalement la population féminine en âge de procréer. Ils sont caractérisés par la prédominance du carcinome canalaire infiltrant. PMID:26523182

Novel ambler class A carbapenem-hydrolyzing beta-lactamase from a Pseudomonas fluorescens isolate from the Seine River, Paris, France.

PubMed

Girlich, Delphine; Poirel, Laurent; Nordmann, Patrice

2010-01-01

A Pseudomonas fluorescens isolate (PF-1) resistant to carbapenems was recovered during an environmental survey performed with water from the Seine River (Paris). It expressed a novel Ambler class A carbapenemase, BIC-1, sharing 68 and 59% amino acid identities with beta-lactamases SFC-1 from Serratia fonticola and the plasmid-encoded KPC-2, respectively. beta-Lactamase BIC-1 hydrolyzed penicillins, carbapenems, and cephalosporins except ceftazidime and monobactams. The bla(BIC-1) gene was chromosomally located and was also identified in two other P. fluorescens strains isolated from the Seine River 3 months later.

Prevalence of Nerocila depressa (Isopoda, Cymothoidae) on Sardinella albella from a Thai estuary

NASA Astrophysics Data System (ADS)

Printrakoon, Cheewarat; Purivirojkul, Watchariya

2011-02-01

The isopod Nerocila depressa is present on 54% of the market-sized white sardines ( Sardinella albella) caught from an estuary in the Trat province of Thailand. The ventral part of the body, especially the upper pectoral fin, was the area most frequently infected by this parasite. Parasite length was positively correlated with fish length, which suggests that the parasites attach to the fish at a young age. At the site of attachment, the parasites erode the epidermis, dermis and muscular tissue of the Sardinella. Such pathology may cause mortality in many fish. Infestation of this parasite was proportional to the weight of the fish. This study reports a new host for N. depressa attachment and is the first report of S. albella infestation in the Trat province where other known host fish species are cultured.

Origin and transport of (238)U and (226)Ra in riverine, estuarine and marine sediments of the Krka River, Croatia.

PubMed

Cukrov, Neven; Mlakar, Marina; Cuculić, Vlado; Barisić, Delko

2009-06-01

Spatial distribution of (238)U and (226)Ra activities in sediment columns along the Krka River and estuary, were studied using gamma spectrometry. Markedly different (238)U and (226)Ra activities between riverine, estuarine and marine sediments were observed. Distribution of these radionuclides, as well as their anthropogenic and natural origin, was evaluated by activity measurements, taking into account sedimentation rates estimated by (137)Cs distribution in sediment columns. Naturally present (238)U and (226)Ra activities were highest in riverine and lowest in marine sediments. (238)U and (226)Ra activities in historic riverine sediments revealed anthropogenic influence from town of Knin, which diminished for 15-20% in 1990s due to warfare that caused stop of industrial, agricultural and transport activities. Drainage of the flysch material naturally elevates (238)U and (226)Ra activities in the vicinity of its inflow in the upper part of estuary. (238)U and (226)Ra from the phosphate ore discharge in the port of Sibenik did not spread further in estuary, which was also confirmed by (238)U and (226)Ra activities detected in Mytilus sp. mussels' tissue.

Water budget and water quality of Ward Lake, flow and water-quality characteristics of the Braden River estuary, and the effects of Ward Lake on the hydrologic system, west-central Florida

USGS Publications Warehouse

Trommer, J.T.; DelCharco, M.J.; Lewelling, B.R.

1999-01-01

The Braden River is the largest tributary to the Manatee River. The river was dammed in 1936 to provide the city of Bradenton a source of freshwater supply. The resulting impoundment was called Ward Lake and had a storage capacity of about 585 million gallons. Reconstruction in 1985 increased the size of the reservoir to about 1,400 million gallons. The lake has been renamed the Bill Evers Reservoir and drains about 59 square miles. The Braden River watershed can be subdivided into three hydrologic reaches. The upper reach consists of a naturally incised free-flowing channel. The middle reach consists of a meandering channel affected by backwater as a result of the dam. The lower reach is a tidal estuary. Water budgets were calculated for the 1993 through 1997 water years. Mean surface-water inflow to Ward Lake for the 5-year period was 1,645 inches per year (equivalent depth over the surface of the lake), or about 81.8 percent of total inflow. Mean ground-water inflow was 311 inches per year, or about 15.5 percent. A mean of 55 inches of rain fell directly on the lake and accounted for only 2.7 percent. Mean surface-water outflow was 1,736 inches, or about 86.4 percent of total water leaving the lake. There was no net ground-water outflow from the lake. Mean surface-water withdrawal for public supply was 229 inches per year, or about 11.4 percent. Mean evaporation was 45 inches and accounted for only 2.2 percent of the mean outflow. Change in lake storage on the budget was negligible. Most chemical constituents contained in water flowing to Ward Lake meet the standards specified by the Florida Department of Environmental Protection and the U.S. Environmental Protection Agency. Phosphorus is the exception, exceeding the U.S. Environmental Protection Agency limits of 0.10 milligram per liter in most samples. However, the source of the phosphorus is naturally occurring phosphate deposits underlying the watershed. Organic nitrogen and orthophosphate are the dominant species of nutrients in the streams and the lake. A major source of water to the streams is the surficial aquifer system. Mineralized water pumped from the intermediate aquifer system and the Upper Floridan aquifer for irrigation of agricultural areas or golf courses has influenced the chemical composition of the surficial aquifer and surface-water systems. The Braden River estuary receives freshwater inflow from Ward Lake and from three major streams discharging downstream from the dam. Salinity levels in the estuary are affected by freshwater flow from these sources and by antecedent conditions in the estuary prior to flow events. The lowest salinity levels are often measured at the confluence with Williams and Gap Creeks rather than at the outfall from the lake. The chemical composition of water flowing from the tributaries to the estuary is similar to the chemical composition of water in the tributaries flowing to Ward Lake and does not appear to be affected by brackish water from high tides. Nitrogen concentrations in water from Glen Creek were greater than in water from all other tributaries in the watershed. Fertilizer from orange groves and stormwater runoff from urban and industrial areas affect the water quality in Glen Creek. The effects of the reservoir on the hydrology of the watershed were to change the middle reach of the river from a brackish water estuary ecosystem to a freshwater lake ecosystem, raise water levels in the surficial aquifer system adjacent to the river, change water quality, and reduce freshwater flow to the estuary during periods of low flow. The lake acts as a sink for total organic carbon, dissolved solids, calcium, chloride, and sulfate, thereby decreasing loads of these constituents to the estuary.

Environmental and ecological impacts of water supplement schemes in a heavily polluted estuary.

PubMed

Su, Qiong; Qin, Huapeng; Fu, Guangtao

2014-02-15

Water supplement has been used to improve water quality in a heavily polluted river with small base flow. However, its adverse impacts particularly on nearby sensitive ecosystems have not been fully investigated in previous studies. In this paper, using the Shenzhen River estuary in China as a case study, the impacts of two potential water supplement schemes (reclaimed water scheme and seawater scheme) on water quality improvement and salinity alteration of the estuary are studied. The influences of salinity alteration on the dominant mangrove species (Aegiceras corniculatum, Kandelia candel, and Avicennia marina) are further evaluated by comparing the alteration with the historical salinity data and the optimum salinity range for mangrove growth. The results obtained indicate that the targets of water quality improvement can be achieved by implementing the water supplement schemes with roughly the same flow rates. The salinity under the reclaimed water scheme lies in the range of historical salinity variation, and its average value is close to the optimum salinity for mangrove growth. Under the seawater scheme, however, the salinity in the estuary exceeds the range of historical salinity variation and approaches to the upper bound of the survival salinity of the mangrove species which have a relatively low salt tolerance (e.g. A. corniculatum). Therefore, the seawater scheme has negative ecological consequences, while the reclaimed water scheme has less ecological impact and is recommended in this study. Copyright © 2013 Elsevier B.V. All rights reserved.

Influence of allochthonous dissolved organic matter on pelagic basal production in a northerly estuary

NASA Astrophysics Data System (ADS)

Andersson, A.; Brugel, S.; Paczkowska, J.; Rowe, O. F.; Figueroa, D.; Kratzer, S.; Legrand, C.

2018-05-01

Phytoplankton and heterotrophic bacteria are key groups at the base of aquatic food webs. In estuaries receiving riverine water with a high content of coloured allochthonous dissolved organic matter (ADOM), phytoplankton primary production may be reduced, while bacterial production is favoured. We tested this hypothesis by performing a field study in a northerly estuary receiving nutrient-poor, ADOM-rich riverine water, and analyzing results using multivariate statistics. Throughout the productive season, and especially during the spring river flush, the production and growth rate of heterotrophic bacteria were stimulated by the riverine inflow of dissolved organic carbon (DOC). In contrast, primary production and photosynthetic efficiency (i.e. phytoplankton growth rate) were negatively affected by DOC. Primary production related positively to phosphorus, which is the limiting nutrient in the area. In the upper estuary where DOC concentrations were the highest, the heterotrophic bacterial production constituted almost 100% of the basal production (sum of primary and bacterial production) during spring, while during summer the primary and bacterial production were approximately equal. Our study shows that riverine DOC had a strong negative influence on coastal phytoplankton production, likely due to light attenuation. On the other hand DOC showed a positive influence on bacterial production since it represents a supplementary food source. Thus, in boreal regions where climate change will cause increased river inflow to coastal waters, the balance between phytoplankton and bacterial production is likely to be changed, favouring bacteria. The pelagic food web structure and overall productivity will in turn be altered.

Historisches Rätsel Physik mit Gewehr und Eiern

NASA Astrophysics Data System (ADS)

Loos, Andreas

2003-11-01

Es fing schon gut an: Mit zehn Jahren saß der begabte Junge bereits in der Universität, wo ihn kein Geringerer als sein Vater persönlich unterrichtete. Damit schlug dieser zwei Fliegen mit einer Klappe: Sein Sohn lernte etwas Gescheites, und er war zugleich in sicherer Obhut.

76 FR 52319 - Taking and Importing of Marine Mammals

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-22

... International Dolphin Conservation Program (IDCP) by Spanish-flag purse seine vessels or purse seine vessels operating under Spanish jurisdiction to be imported into the United States. The affirmative finding was... States of yellowfin tuna and products derived from yellowfin tuna harvested in the ETP by Spanish-flag...

Evidence of natural reproduction by Muskellunge in middle Tennessee rivers

USGS Publications Warehouse

Warren, Lila H.; Bettoli, Phillip William

2014-01-01

Native Esox masquinongy (Muskellunge) in the Cumberland River drainage, TN, were nearly extirpated in the 1970s due to decades of over-fishing and habitat degradation from coal mining, logging, and other land-use practices. In an effort to preserve the species in that drainage, a stocking program began in 1976 in the upper Caney Fork River system in middle Tennessee where Muskellunge were not native. A trophy Muskellunge fishery eventually developed, but it was unknown whether Muskellunge were reproducing in the upper Caney Fork River system or whether the fishery was wholly dependent on the stocking program. To establish evidence of natural reproduction, we used seines, backpack electrofishing, and boat electrofishing gear in 2012 to find age-0 Muskellunge in the upper Caney Fork River system. Natural reproduction of Muskellunge was documented in the mainstem Caney Fork River above Great Falls Dam and in 3 of its 4 major tributaries. Seventeen age-0 Muskellunge were collected and one other was observed, but not handled. Age-0 Muskellunge grew rapidly (1.80–2.34 mm/day), and the largest fish collected during the study reached a total length of 399 mm by 9 October 2012. A cessation of stocking for several years coupled with routine monitoring could reveal whether natural recruitment is sufficient to sustain the fishery.

Zwischen Commonsense und Wissenschaft Mathematik in der Erziehungsphilosophie A. N. Whiteheads

NASA Astrophysics Data System (ADS)

Sölch, Dennis

Obwohl Whitehead heute wie selbstverständlich als Philosoph rezipiert wird, so hat er seine wissenschaftliche Laufbahn doch als Mathematiker begonnen. Lange Zeit war er gemeinsam mit Bertrand Russell als Autor der Principia Mathematica unter Mathematikern und mathematischen Logikern deutlich besser bekannt als unter Philosophen. Doch selbst von denjenigen, die sich mit Whiteheads Überlegungen zur Metaphysik, zur Wissenschaftsgeschichte und zur Theologie befassen, werden seine Schriften zur Philosophie von Erziehung und Bildung häufig kaum beachtet. So entgeht es leicht, dass Whitehead nicht nur ein auf theoretischem Gebiet brillanter Mathematiker war, sondern sein theoretisches Fachwissen im Hinblick auf pädagogische und didaktische Relevanz fortwährend reflektiert hat.

Comparative geochemistry of Indian margin (Arabian Sea) sediments: Estuary to continental slope.

NASA Astrophysics Data System (ADS)

Cowie, Greg; Mowbray, Stephen; Kurian, Siby; Sarkar, Amit; White, Carol; Anderson, Amy; Vergnaud, Bianca; Johnstone, Gisele; Brear, Samuel; Woulds, Clare; Naqvi, Wajih; Kitazato, Hiroshi

2014-05-01

Factors controlling the distribution of organic matter in the Arabian Sea have been the subject of much research and debate ever since organic-rich slope deposits were associated with the mid-water oxygen minimum zone (OMZ) However, the debate remains open, and numerous interacting factors have been invoked as important controls. A limitation of most previous studies is that they have been restricted to limited portions of the margin, and have not included molecular-level tracers that allow distinction of organic matter (OM) source and degradation state as factors in OM distribution. We report results from sites across the Indian margin of the Arabian Sea, which were analysed for carbon and nitrogen compositions (elemental and isotopic), grain size and indices of OM source and degradation state. Site locations ranged from the Mandovi/Zuari estuaries to depths of ~2000m on the continental slope, thus spanning both the semi-permanent OMZ on the upper slope (~200-1300m) and the seasonal hypoxic zone that impinges on the shelf. Source indices showed mixed marine and terrigenous OM within the estuaries, but overwhelming predominance (80%+) of marine OM on the shelf and slope, even in nearshore deposits. Thus, riverine OM is heavily diluted or efficiently remineralised within or immediately offshore of the estuaries. Any terrigenous OM that is exported appears to be retained in nearshore muds; lignin phenols indicate that the small terrigenous OM content of slope sediments is of different origin, potentially from rivers to the north. Organic C contents of surface shelf and slope sediments varied from <0.5 wt% in relict shelf sands to a maximum of >7 wt% at upper slope sites within the OMZ, then decreasing to ≤1wt% at 2000m. However, major variability (~5 wt%) occured within the OMZ at sites with near-identical depths and bottom-water oxygen. A strong relationship between organic C and grain size was seen for OMZ sediments, but lower C loadings were found for sites on the shelf and below the OMZ. Diagenetic indices confirmed that lower C content below the OMZ is associated with greater extent of OM degradation, but that C-poor shelf sediments are not consistently more degraded than those within the OMZ. Together, results indicate that OM enrichment on the upper slope, where it occurs, can be explained by winnowing or other physical processes on the shelf combined with progressive OM degradation with increasing oxygen exposure below the OMZ. Reduced oxygen exposure may contribute to observed OM enrichment with the OMZ, but hydrodynamic processes are the overriding control on sediment OM distribution, even within the OMZ.

50 CFR 300.223 - Purse seine fishing restrictions.

Code of Federal Regulations, 2010 CFR

2010-10-01

... the three-year period 2009-2011, there is a limit of 7,764 fishing days. (2) NMFS will determine the... one nautical mile of a FAD. (2) Set a purse seine in a manner intended to capture fish that have.... (iii) The Pacific Islands Regional Administrator has determined that an observer is not available for...

50 CFR 300.223 - Purse seine fishing restrictions.

Code of Federal Regulations, 2011 CFR

2011-10-01

... the three-year period 2009-2011, there is a limit of 7,764 fishing days. (2) NMFS will determine the... one nautical mile of a FAD. (2) Set a purse seine in a manner intended to capture fish that have.... (iii) The Pacific Islands Regional Administrator has determined that an observer is not available for...

Kyste hydatique mammaire primitive

PubMed Central

Boufettal, Houssine; Samouh, Naïma

2015-01-01

La localisation mammaire du kyste hydatique est exceptionnelle. De ce fait, le diagnostic est difficile avant l'examen anatomopathologique. Nous rapportons une observation d'un cas de kyste hydatique du sein chez une femme de 32 ans, qui consultait pour un nodule du sein, dont l'imagerie montrait une lésion en rétro-aréolaire du sein gauche, homogène, ovalaire et de contours réguliers. L'examen anatomopathologique objectivait un kyste hydatique à localisation mammaire. Les suites opératoires étaient simples. L'hydatidose est une maladie ubiquitaire, pouvant atteindre tous les organes. Le diagnostic peut être évoqué devant une masse kystique du sein avec des aspects très évocateurs à l'imagerie. La confirmation du diagnostic n'est confirmée qu'après une cytoponction ou une chirurgie d'exérèse qui réalise le traitement de cette pathologique. La négativité du bilan d'extension hydatique permet de retenir une localisation primitive de l’échinococcose. PMID:26185575

Modelling the effect of hydrological change on estuarine health: An Australian Perspective. (Invited)

NASA Astrophysics Data System (ADS)

Bruce, L. C.; Adiyanti, S.; Ruibal, A. L.; Hipsey, M. R.

2013-12-01

Estuaries provide an important role in the filtering and transformation of carbon and nutrients from coastal catchments into the marine environment. Global trends including climate change, increased population, industrialization and agriculture have led to the rapid deterioration of estuarine ecosystems across the world. Within the Australian context, a particular concern is how changes to hydrological regimes, due to both water diversions and climate variability, are contributing to increased stress and consequent decline in estuarine health. In this study we report the modeling output of five Australian estuaries, each with different hydrological regimes and alternative management issues relating to altered hydrology: 1) The Yarra River estuary is a highly urbanized system, also receiving agriculturally derived nutrients, where the concern is the role of periodic hypoxia in reducing the assimilation capacity of nitrogen and thus increased risk of algal blooms forming in the coastal environment; 2) The upper Swan River estuary in Western Australia, which experiences persistent anoxia and hypoxia brought about by reduced flows has led to the commissioning of several oxygenation plants to alleviate stress on biodiversity and overall estuarine health; 3) The health of the Caboolture estuary in Queensland has deteriorated in the past decade with the aim of model development to quantify the various sources of surface and groundwater derived nutrients; 4) The construction of an additional channel to increase flushing in the Peel Harvey estuary in Western Australia was designed to control persistent harmful algal blooms; and 5) The Lower River Murray estuary experienced a prolonged drought that led to the development of acid sulfate soils and acid drainage deteriorating water quality. For these applications we applied 3-D hydrodynamic-biogeochemical models to determine underlying relationships between altered flow regimes, increased temperatures and the response of relevant estuarine health indicators. In general terms, the greatest threat identified was an increasing trend towards low flow conditions, both during winter and summer months beyond the usual pattern of flow variability. Minimum flows required to maintain estuarine health were determined using the models. In order to support management decisions related to environmental flow allocation and other interventions, examples of how the high frequency model output can be used to develop simple ';reduced' models that relate parameters of estuarine health to hydrological variability are described. Areas where further research is required to improve our understanding of estuarine response to hydrological change are discussed.

Sedimentary controls on modern sand grain coat formation

NASA Astrophysics Data System (ADS)

Dowey, Patrick J.; Worden, Richard H.; Utley, James; Hodgson, David M.

2017-05-01

Coated sand grains can influence reservoir quality evolution during sandstone diagenesis. Porosity can be reduced and fluid flow restricted where grain coats encroach into pore space. Conversely pore-lining grain coats can restrict the growth of pore-filling quartz cement in deeply buried sandstones, and thus can result in unusually high porosity in deeply buried sandstones. Being able to predict the distribution of coated sand grains within petroleum reservoirs is thus important to help find good reservoir quality. Here we report a modern analogue study of 12 sediment cores from the Anllóns Estuary, Galicia, NW Spain, collected from a range of sub-environments, to help develop an understanding of the occurrence and distribution of coated grains. The cores were described for grain size, bioturbation and sedimentary structures, and then sub-sampled for electron and light microscopy, laser granulometry, and X-ray diffraction analysis. The Anllóns Estuary is sand-dominated with intertidal sand flats and saltmarsh environments at the margins; there is a shallowing/fining-upwards trend in the estuary-fill succession. Grain coats are present in nearly every sample analysed; they are between 1 μm and 100 μm thick and typically lack internal organisation. The extent of grain coat coverage can exceed 25% in some samples with coverage highest in the top 20 cm of cores. Samples from muddy intertidal flat and the muddy saltmarsh environments, close to the margins of the estuary, have the highest coat coverage (mean coat coverage of 20.2% and 21.3%, respectively). The lowest mean coat coverage occurs in the sandy saltmarsh (10.4%), beyond the upper tidal limit and sandy intertidal flat environments (8.4%), close to the main estuary channel. Mean coat coverage correlates with the concentration of clay fraction. The primary controls on the distribution of fine-grained sediment, and therefore grain coat distribution, are primary sediment transport and deposition processes that concentrate the clay fraction in the sediment towards the margins of the estuary. Bioturbation and clay illuviation/mechanical infiltration are secondary processes that may redistribute fine-grained sediment and produce grain coats. Here we have shown that detrital grain coats are more likely in marginal environments of ancient estuary-fills, which are typically found in the fining-upward part of progradational successions.

Cancer du sein au Maroc: profil phénotypique des tumeurs

PubMed Central

Khalil, Ahmadaye Ibrahim; Bendahhou, Karima; Mestaghanmi, Houriya; Saile, Rachid; Benider, Abdellatif

2016-01-01

Le cancer du sein est le plus fréquent chez la femme et figure parmi les principales causes de mortalité liées au cancer. La curabilité de ce type tumoral est en augmentation, grâce aux programmes de dépistage et aux progrès thérapeutiques, qui ont certes augmenté la survie des patients. Mais des défis restent à relever en rapport avec l’instabilité phénotypique des cellules cancéreuses. L’objectif de ce travail est d’étudier le profil phénotypique du cancer du sein chez les patients pris en charge au Centre Mohammed VI pour le traitement des Cancers, durant les années 2013-2014. Il s’agit d’une étude transversale sur deux années, incluant les cas du cancer du sein pris en charge au Centre. Le recueil des données était fait à partir des dossiers des patients et analysés par le logiciel Epi Info. 1277 patients ont été pris en charge au sein de notre centre. 99,5% des cas de sexe féminin, l’âge moyen était 50,20 ± 11,34 ans. Le type histologique le plus fréquent était le carcinome canalaire infiltrant (80,7% des cas). Le stade diagnostic était précoce (56,9%). Le phénotype moléculaire le plus fréquent était le luminal A (41,4% des cas). Le luminal B, le HER2 et les triples négatifs étaient dans respectivement 10,4%, 6,3%, 11,2% des cas. L’étude du phénotype tumoral des patients atteints du cancer du sein permet l’orientation du clinicien dans le choix du traitement, et des décideurs dans la planification de programmes de lutte contre cette pathologie. PMID:28292037

Connaissances des médecins généralistes de Mohammedia (Maroc) concernant le dépistage du cancer du sein

PubMed Central

Zine, Karima; Nani, Samira; Lahmadi, Imad Ait; Maaroufi, Abderrahmane

2016-01-01

Introduction Le cancer du sein représente un problème de santé publique majeur au Maroc. C'est le premier cancer chez la femme. L'objectif de ce travail était d'évaluer les connaissances des médecins généralistes (MG) en matière de dépistage du cancer du sein dans la préfecture de Mohammedia Maroc. Méthodes Nous avons mené une étude transversale, descriptive, exhaustive incluant les 97 MG exerçant dans les établissements de soins de santé de base du secteur public et privé de la province de Mohammedia. Résultats Le taux de participation était de 87%. L'âge moyen des MG était de 49,6 ± 8,1. Quatre-vingt pour cent (n=55) des MG ont donné une incidence incorrecte, 77,6% (n=85) ont reconnu l'existence d'un plan national de prévention et de contrôle du cancer (PNPCC) au Maroc, et 67,1 des MG ont rapporté l'existence d'un registre du cancer au Maroc. Le secteur d'activité était associé significativement avec les connaissances des MG sur le PNPCC et sur l'existence d'un guide de détection précoce du cancer du sein avec respectivement (p=0,003 et p=0,001). Une association significative entre l'ancienneté et l'existence d'un guide de détection précoce du cancer du sein et d'un registre du cancer du sein a été retrouvée avec (respectivement p=0,005 et p=0.002). Conclusion À la lumière de ces résultats il faudra renforcer les connaissances et les pratiques des MG par la promotion de la formation initiale et continue sur le dépistage. PMID:27800098

Conservation paleobiology in near time: Isotopic estimates for restoration flows to the estuary of the Colorado River, Mexico

NASA Astrophysics Data System (ADS)

Flessa, Karl; Dettman, David; Cintra-Buenrostro, Carlos; Rowell, Kirsten

2016-04-01

In most years since 1960, the Colorado River has not reached the sea. Upstream dams and diversions in the U.S.A. and Mexico have diverted the river's water for agricultural and municipal use. The river's estuary in the upper Gulf of California, in Mexico, once supported very large populations of Mulinia coloradoensis, a trophically important bivalve mollusk, and Totoaba macdonaldi, a now-endangered scianid fish,. Because Colorado River water is isotopically distinct from Gulf of California seawater, we used the δ18O composition of the pre-dam bivalve shells and fish otoliths to estimate past salinities and river flows. We estimate that five to ten percent of the river's annual flow would be needed to restore M. coloradoensis habitat in the river's mouth and to restore the nursery grounds of T. macdonaldi. The dead can speak to the living.

Summertime conditions of a muddy estuarine environment: the EsCoSed project contribution.

PubMed

Brocchini, Maurizio; Calantoni, Joseph; Reed, Allen H; Postacchini, Matteo; Lorenzoni, Carlo; Russo, Aniello; Mancinelli, Alessandro; Corvaro, Sara; Moriconi, Giacomo; Soldini, Luciano

2015-01-01

As part of the Estuarine Cohesive Sediments (EsCoSed) project, a field experiment was performed in a highly engineered environment, acting as a natural laboratory, to study the physico-chemical properties of estuarine sediments and the associated hydro-morphodynamics during different seasons. The present contribution focuses on the results obtained from the summertime monitoring of the most downstream part of the Misa River (Senigallia, Italy). The measured hydrodynamics suggested a strong interaction between river current, wave forcing and tidal motion; flow velocities, affected by wind waves traveling upstream, changed significantly along the water column in both direction and magnitude. Surficial salinities in the estuary were low in the upper reaches of the estuary and exceeded 10 psu before the river mouth. Montmorillonite dominated the clay mineral assemblage, suggesting that large, low density flocs with high settling velocities (>1 mm s(-1)) may dominate the suspended aggregate materials.

Composition and structure of the larval fish community related to environmental parameters in a tropical estuary impacted by climate change

NASA Astrophysics Data System (ADS)

Sloterdijk, Hans; Brehmer, Patrice; Sadio, Oumar; Müller, Hanno; Döring, Julian; Ekau, Werner

2017-10-01

Mangrove ecosystems have long been considered essential habitats and are commonly viewed and referred to as "nursery areas". They are highly sensitive to climate change, and environmental transformations in these ecosystems are expected. The Sine Saloum estuary is a case of a system affected by global climate change where reduced precipitation and temperature increase have resulted in an inversion of the salinity gradient. Within the estuary, the composition and structure of the larval fish community related to environmental parameters were investigated using neuston and ring trawl nets. Larval fishes were sampled at 16 stations distributed along a salinity and distance-to-the-sea gradient during four field campaigns (November 2013, February, June, and August 2014) covering an annual cycle. This is the first study documenting the spatial and temporal assemblages of fish larvae in an inverse estuary. The total of 41 taxa representing 24 families and 34 genus identified in this study was lower than that of other tropical estuaries. Clupeidae spp. was the dominant taxon, accounting for 28.9% of the total number of fish larvae caught, followed by Gerreidae spp. (21.1%), Hyporamphus picarti (18.8%), Diplodus bellottii (8.9%), Hypleurochilus langi (4.8%), Mugilidae spp. (4.4%), and Gobiidae sp.1 (3.5%). A total of 20 taxa were recorded within the upper estuary region, whereas 29 and 37 taxa were observed in the middle and lower reaches, respectively. While larval fish were captured at all sites and during all seasons, abundances and richness decreased with increasing salinity. Larval fish assemblages also showed a clear vertical structure corresponding to three distinct water strata. Salinity, water temperature, and dissolved oxygen were the variables that best explained the spatial and temporal differences in larval fish assemblages. It is difficult to forecast the future situation for this system but so far, compared to other mangrove estuarine systems, we have observed the loss of freshwater species in favour of species of marine origin. The information provided in the present study is a contribution to the knowledge of tropical biodiversity and modifications of the ichthyoplankton communities in the context of climate change and future green fund action.

Improving the Representation of Estuarine Processes in Earth System Models

NASA Astrophysics Data System (ADS)

Sun, Q.; Whitney, M. M.; Bryan, F.; Tseng, Y. H.

2016-12-01

The exchange of freshwater between the rivers and estuaries and the open ocean represents a unique form of scale-interaction in the climate system. The local variability in the terrestrial hydrologic cycle is integrated by rivers over potentially large drainage basins (up to semi-continental scales), and is then imposed on the coastal ocean at the scale of a river mouth. Appropriately treating riverine freshwater discharge into the oceans in Earth system models is a challenging problem. Commonly, the river runoff is discharged into the ocean models with zero salinity and arbitrarily distributed either horizontally or vertically over several grid cells. Those approaches entirely neglect estuarine physical processes that modify river inputs before they reach the open ocean. A physically based Estuary Box Model (EBM) is developed to parameterize the mixing processes in estuaries. The EBM has a two-layer structure representing the mixing processes driven by tides and shear flow within the estuaries. It predicts the magnitude of the mixing driven exchange flow, bringing saltier lower-layer shelf water into the estuary to mix with river water prior to discharge to the upper-layer open ocean. The EBM has been tested against observations and high-resolution three-dimensional simulations of the Columbia River estuary, showing excellent agreement in the predictions of the strength of the exchange flow and the salinity of the discharged water, including modulation with the spring-neap tidal cycle. The EBM is implemented globally at every river discharge point of the Community Earth System Model (CESM). In coupled ocean-sea ice experiments driven by CORE surface forcing, the sea surface salinity (SSS) in the coastal ocean is increased globally compared to the standard model, contributing to a decrease in coastal stratification. The SSS near the mouths of some of the largest rivers is decreased due to the reduction in the area over which riverine fresh water is discharged. The results from experiments with the fully coupled CESM are broadly consistent, supporting the inclusion of the parameterization in CESM version 2 to be released in late 2016.

An ecological assessment of land use impacts in small watersheds of the Chesapeake Bay

Treesearch

Andrew Leight; John Jacobs; Lonnie Gonsalves; Gretchen Messick; Shawn McLaughlin; Jay Lewis; Juliana Brush; Eric Daniels; Matthew Rhodes; Lewis Collier; Robert Wood

2016-01-01

The Chesapeake Bay, the nation’s largest estuary, remains in relatively poor condition despite intensive public and scientific attention. In order to better understand the stressors and impacts occurring in the Bay as a result of land management decisions we conducted an assessment of both habitat condition and organismal response in three small watersheds of the upper...

78 FR 48943 - Endangered and Threatened Wildlife and Plants; Endangered Species Act Listing Determination for...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-12

... their spawning runs about 2 weeks later than alewives do (DFO, 2001). River herring conform to a...); run counts; young-of-the-year (YOY) seine surveys; juvenile-adult fisheries independent seine, gillnet... Bay and the Nanticoke River, but CPUE has recently increased in the Hudson River (ASMFC, 2012). Run...

Evaluation of three gears for sampling spawning populations of rainbow trout in a large Alaskan river

USGS Publications Warehouse

Schwanke, C.J.; Hubert, W.A.

2004-01-01

Alternatives to electrofishing are needed for sampling sexually mature rainbow trout Oncorhynchus mykiss during the spawning season in large Alaskan rivers. We compared hook and line, beach seining, and actively fished gill nets as sampling tools. Beach seining and active gill netting yielded similar catch rates, length frequencies, and sex ratios of sexually mature fish. Hook-and-line sampling was less effective, with a lower catch rate and selectivity for immature fish and sexually mature females. We conclude that both beach seining and active gill netting can serve as alternatives to electrofishing for sampling sexually mature rainbow trout stocks during the spawning season in large rivers with stable spring flows and spawning areas with few snags.

Victor F. Weisskopf (1908 - 2002): Physikgeschichte

NASA Astrophysics Data System (ADS)

Jacobi, Manfred

2002-11-01

Universal gebildete und interessierte Menschen sind selten geworden in unserer Zeit. Victor F. Weisskopf war einer von ihnen. Sein geistiger Horizont umfasste nicht nur sein eigentliches Fachgebiet, die Physik, wo er sich durch fundamentale Arbeiten in den Bereichen der Quantenfeldtheorie, der Kern- und Elementarteilchenphysik hervortat. Daneben bildeten Kunst und Musik sowie ein außergewöhnliches Engagement in sozialen und politischen Angelegenheiten die Eckpunkte seines Lebens. Der Einsatz für die Verständigung zwischen den Machtblöcken während des Kalten Krieges war für ihn ebenso selbstverständlich wie das Bedürfnis, die neuen Ideen der Physik einem breiten Publikum nahe zu bringen. Die Wissenschaft erschien ihm als das geeignete Mittel, um zum Wohle der Menschheit zu wirken.

Fine-grained sediment spatial distribution on the basis of a geostatistical analysis: Example of the eastern Bay of the Seine (France)

NASA Astrophysics Data System (ADS)

Méar, Y.; Poizot, E.; Murat, A.; Lesueur, P.; Thomas, M.

2006-12-01

The eastern Bay of the Seine (English Channel) was the subject in 1991 of a sampling survey of superficial sediments. Geostatistic tools were used to examine the complexity of the spatial distribution of the fine-grained fraction (<50 μm). A central depocentre of fine sediments (i.e. content up to 50%) oriented in a NW-SE direction in a muddy coastal strip, in a very high energy hydrodynamical situation due to storm swells and its megatidal setting, is for the first time recognised and discussed. Within this sedimentary unit, the distribution of the fine fraction is very heterogeneous, with mud patches of less than 4000 m diameter; the boundary between these mud patches and their substratum is very sharp. The distribution of this fine fraction appears to be controlled by an anticyclonic eddy located off the Pays de Caux. Under the influence of this, the suspended material expelled from the Seine estuary moves along the coast and swings off Antifer harbour, towards the NW. It is trapped within this eddy because of the settling of suspended particulate matter. Both at a general scale and a local scale the morphology (whether inherited or due to modern processes) has a strong influence on the spatial distribution of the fine fraction. At the general scale, the basin-like shape of the area facilitates the silting, and the presence of the submarine dunes, called "Ridins d'Antifer", clearly determines the northern limit of the muddy zone. At a local scale, the same influence is obvious: paleovalleys trap the fine sediments, whereas isolated sand dunes and ripples limit the silting. This duality of role of the morphology is therefore one of the reasons why the muddy surface is extremely heterogeneous spatially. The presence of an important population of suspension feeding echinoderm, the brittle-star Ophiothrix fragilis Abildgaard, has led to a local increase in the silting, and to the modification of the physicochemical and sedimentological parameters. A complex relationship is shown to occur between the amount of fine fraction and the number of brittle-stars (ind. m -2). Classical statistical methods are not appropriate to study the spatial distribution of the mud fraction, because the spatial component of the percentage of the distribution is not integrated in the analysis. On the other hand, this is the main property of the geostatistic concepts. The use of geostatistic tools within a strict and clearly identified procedure enables the proposal of an accurate cartography. Further application of the proposed protocol (based on a semivariographic study and a conditional simulation interpolation) for surficial sediments mapping will help explain spatial and temporal variations of fine-grained fraction. Then assessments of sedimentation and erosion stages allow highlighting signature of environmental processes.

Temporal variability in lipid dynamics of three coexisting dominant krill species in the St. Lawrence Estuary

NASA Astrophysics Data System (ADS)

Cabrol, J.; Aulanier, F.; Tremblay, R.; Starr, M.; Plourde, S.; Rainville, L.; Winkler, G.

2016-02-01

The St. Lawrence Estuary (Canada) is a subarctic ecosystem characterised by a strong stratification with a cold intermediate layer providing different thermal habitats occupied by different krill species (Meganyctiphanes norvegica, Thysanoessa raschii, Thysanoessa inermis), ranging from temperate to arctic. Krill is an important consumer of phyto/zooplankton allowing energy transfer (mostly lipids) towards upper trophic levels. However, lipid dynamics and trophic interactions between these krill species are poorly understood in the St. Lawrence Estuary. Here, we describe the seasonal variability in their lipids classes and fatty acids composition in relation to biotic and abiotic factors. Lipid content of the temperate species M. norvegica showed high levels of triacylglycerol (TAG) comparatively to the arctic species T. inermis. In this latter species,the wax ester (WE) predominated, as in many other arctic species. In contrast to many other regions of its geographical distribution, we detected a significant quantity of WE in M. norvegica that could represent an adaptation of this species to subarctic environments in order to survive during the wintertime. M. norvegica had however less lipid content per individual than T. raschii and T, inermis, whereas M. norvegica is the bigger species. In addition, lipids content of M. norvegica was related to copepod density in the St. Lawrence Estuary suggesting dominance of "carnivorous feeding". This feeding dominance was confirmed by fatty acids composition of tissues. In opposite, Thysanoessa sp. seems to be more generalist (omnivorous) although with a preference for phytoplankton. Our results are discussed in the context of climate change predicted.

Baseline ecological risk assessment of the Calcasieu Estuary, Louisiana: 3. An evaluation of the risks to benthic invertebrates associated with exposure to contaminated sediments

USGS Publications Warehouse

MacDonald, Donald D.; Ingersoll, Christopher G.; Kemble, Nile E.; Smorong, Dawn E.; Sinclair, Jesse A.; Lindskoog, Rebekka; Gaston, Gary; Sanger, Denise; Carr, R. Scott; Biedenbach, James; Gouguet, Ron; Kern, John; Shortelle, Ann; Field, L. Jay; Meyer, John

2011-01-01

The sediments in the Calcasieu Estuary are contaminated with a wide variety of chemicals of potential concern (COPCs), including heavy metals, polycyclic aromatic hydrocarbons, polychlorinated biphenyls, phthalates, chlorinated benzenes, and polychlorinated dibenzo-p-dioxins and dibenzofurans. The sources of these COPCs include both point and non-point source discharges. As part of a baseline ecological risk assessment, the risks to benthic invertebrates posed by exposure to sediment-associated COPCs were assessed using five lines of evidence, including whole-sediment chemistry, pore-water chemistry, whole-sediment toxicity, pore-water toxicity, and benthic invertebrate community structure. The results of this assessment indicated that exposure to whole sediments and/or pore water from the Calcasieu Estuary generally posed low risks to benthic invertebrate communities (i.e., risks were classified as low for 68% of the sampling locations investigated). However, incremental risks to benthic invertebrates (i.e., compared with those associated with exposure to conditions in reference areas) were indicated for 32% of the sampling locations within the estuary. Of the three areas of concern (AOCs) investigated, the risks to benthic invertebrates were highest in the Bayou d'Inde AOC; risks were generally lower in the Upper Calcasieu River AOC and Middle Calcasieu River AOC. The areas showing the highest risks to sediment-dwelling organisms were generally located in the vicinity of point source discharges of COPCs. These results provided risk managers with the information required to make decisions regarding the need for remedial actions at the site.

Developing a Phytoplankton Biotic Index as an Indicator of Freshwater Inflow within a Subtropical Estuary

NASA Astrophysics Data System (ADS)

Steichen, J. L.; Quigg, A.; Lucchese, A.; Preischel, H.

2016-02-01

Freshwater inflows drive the water and sediment quality in coastal bays and estuaries influencing the ecosystem and health of the biological community. Phytoplankton accessory pigments (used as a proxy for major taxonomic groups) have been utilized to develop a biotic index of physical, chemical and biotic disturbances in Chesapeake Bay (USA) and other estuarine systems. In this study we have used the Chesapeake Bay - Phytoplankton Index of Biotic Integrity model as a guide in developing an index for Galveston Bay, TX (USA) as an indicator of sufficient freshwater inflow to a subtropical estuary. Multivariate statistical analyses were run using PRIMER-E+PERMANOVA to determine the correlations between phytoplankton accessory pigment concentrations and a suite of abiotic factors associated with freshwater inflow (salinity, DIN, PO4, secchi). Phytoplankton pigment concentrations and water quality parameters were collected across Galveston Bay on a monthly basis from 2008-2013. In the upper region of the bay nearest the river source Dinophyceae, Cryptophyceae (winter (Dec-Feb)) and Chlorophyceae (winter and spring (Mar-May)) were significantly correlated to freshwater inflow and nutrient concentrations PO4 (p<0.05). Increased concentrations of Bacillariophyceae and Cyanophyceae (summer (Jun-Aug)) were significantly correlated to lower concentrations of DIN (p<0.05). Near the mouth of the estuary there was a significant correlation between the increase in Bacillariophyceae, Cyanophyceae, Cryptophyceae and Dinophyceae with decreasing PO4 (p<0.05). Within the dynamic system of Galveston Bay we are working to apply a Phytoplankton Index of Biotic Integrity as a means of monitoring the biological health of this ecologically and economically important estuarine ecosystem.

River flow, zooplankton and dominant zooplanktivorous fish dynamics in a warm-temperate South African estuary.

PubMed

Mbandzi, N; Wasserman, R J; Deyzel, S H P; Vine, N G; Whitfield, A K

2018-06-01

The possible links between river flow, zooplankton abundance and the responses of zooplanktivorous fishes to physico-chemical and food resource changes are assessed. To this end, the seasonal abundance, distribution and diet of the estuarine round-herring Gilchristella aestuaria and Cape silverside Atherina breviceps were studied in the Kariega Estuary. Spatio-temporal differences were determined for selected physico-chemical variables, zooplankton abundance and zooplanktivorous fish abundance and distribution. Results indicated that, following a river flood event in winter (>30 m 3  s -1 ), altered physico-chemical conditions occurred throughout the estuary and depressed zooplankton stocks. Abundance of G. aestuaria was highest in spring, with this species dominant in the upper and middle zones of the estuary, while A. breviceps was dominant in summer and preferred the middle and lower zones. The catch per unit of effort of both zooplanktivores also declined significantly following the flooding, thus suggesting that these fishes are reliant on zooplankton as a primary food source for healthy populations. Copepods dominated the stomach contents of both fish species, indicating a potential for strong interspecific competition for food, particularly in the middle reaches. Temporal differences were evident in dietary overlap between the two zooplanktivorous fish species and were correlated with river flow, zooplankton availability and fish distribution. The findings of this study emphasize the close trophic linkages between zooplankton and zooplanktivorous fishes under changing estuarine environmental conditions, particularly river flow and provide important baseline information for similar studies elsewhere in South Africa and the rest of the world. © 2018 The Fisheries Society of the British Isles.

Notes on a Mesodinium rubrum red tide in San Francisco Bay (California, USA)

USGS Publications Warehouse

Cloern, James E.; Cole, Brian E.; Hager, Stephen W.

1994-01-01

Discrete red patches of water were observed in South San Francisco Bay (USA) on 30 April 1993, and examination of live samples showed that this red tide was caused by surface accumulations of the pigmented ciliate Mesodinium rubrum . Vertical profiles showed strong salinity and temperature stratification in the upper 5 m, peak chlorophyll fluorescence in the upper meter, and differences in the small-scale density structure and fluorescence distribution among red patches. Events preceding this Mesodinium red tide included: (i) heavy precipitation and run-off, allowing for strong salinity stratification; (ii) a spring diatom bloom where the chlorophyll a concentration reached 50 mg m −3 ; (ii) depletions of dissolved inorganic N and Si in the photic zone; and (iv) several days of rapid warming and stabilization of the upper surface layer. These conditions may be general prerequisites for M.rubrum blooms in temperate estuaries.

Temporal and spatial behavior of pharmaceuticals in ...

EPA Pesticide Factsheets

The behavior of active pharmaceutical ingredients (APIs) in urban estuaries is not well understood. In this study, 15 high volume usage APIs were measured over a one year period throughout Narragansett Bay, RI, USA to determine factors controlling their concentration and distribution. Dissolved APIs ranged in concentration from not detected to 310 ng/L, with numerous APIs present at all sites and sampling periods. Eight APIs were present in suspended particulate material, ranging in concentration from <1 ng/g to 44 ng/g. Partitioning coefficients (Kds) were determined for APIs present in both the dissolved and particulate phases, with their range and variability remaining relatively constant during the study. Organic carbon normalization reduced the observed variability of several APIs to a small extent; however, other factors appear to play a role in controlling partitioning behavior. The continuous discharge of wastewater treatment plant effluents into upper Narragansett Bay resulted in sustained levels of APIs, resulting in a zone of “pseudo-persistence.” For most of the APIs, there was a strong relationship with salinity, indicating conservative behavior within the estuary. Short flushing times in Narragansett Bay coupled with APIs present primarily in the dissolved phase suggests that most APIs will be diluted and transported out of the estuary, with only small amounts of several compounds removed to and sequestered in sediments. This study ide

Investigating phenology of larval fishes in St. Louis River ...

EPA Pesticide Factsheets

As part of the development of an early detection monitoring strategy for non-native fishes, larval fish surveys have been conducted since 2012 in the St. Louis River estuary. Survey data demonstrates there is considerable variability in fish abundance and species assemblages across different habitats and at multiple temporal scales. To optimize early detection monitoring we need to understand temporal and spatial patterns of larval fishes related to their development and dispersion, as well as the environmental factors that influence them. In 2016 we designed an experiment to assess the phenological variability in larval fish abundance and assemblages amongst shallow water habitats. Specifically, we sought to contrast different thermal environments and turbidity levels, as well as assess the importance of vegetation in these habitats. To evaluate phenological differences we sampled larval fish bi-weekly at nine locations from mid-May to mid-July. Sampling locations were split between upper estuary and lower estuary to contrast river versus seiche influenced habitats. To assess differences in thermal environments, temperature was monitored every 15 minutes at each sampling location throughout the study, beginning in early April. Our design also included sampling at both vegetated (or pre-vegetated) and non-vegetated stations within each sampling location throughout the study to assess the importance of this habitat variable. Hydroacoustic surveys (Biosonics) were

Time scales of change in the San Francisco Bay benthos

USGS Publications Warehouse

Nichols, F.H.; Thompson, J.K.

1985-01-01

Results from multi-year investigations in the San Francisco Bay estuary show that large abundance fluctuations within benthic macroinvertebrate populations reflect both (1) within-year periodicity of reproduction, recruitment, and mortality that is not necessarily coincident with seasonal changes of the environment (e.g., the annual temperature cycle), and (2) aperiodic density changes (often larger than within-year fluctuations) following random perturbations of the environment. Density peaks of the small, short-lived estuarine invertebrates that comprise the vast majority of individuals in the bay's relatively homogeneous benthic community normally occur between spring and autumn depending on the species, in large part a reflection of reproductive periodicity. However, because mild winters permit reproductive activity in some of the common species throughout much of the year, other factors are important to within-year density fluctuations in the community. Seasonally predictable changes in freshwater inflow, wind and tidal mixing, microalgal biomass, and sediment erosion/deposition patterns all contribute to observed seasonal changes in abundance. For example, the commonly observed decline in abundance during winter reflects both short-lived species that die after reproducing and the stress of winter conditions (e.g., inundation by less saline, sediment-laden water and the decline in both planktonic and benthic algal biomass - a direct source of food for the shallow-water benthos). On the other hand, data from several studies suggest that observed 'recruitment' and 'mortality' may in fact be the migration of juveniles and adults to and from study sites. For example, the common amphipod Ampelisca abdita apparently moves from shallow to deep water, or from up-estuary to down-estuary locations, coincident with periods of high river runoff in winter. Growth of individuals within the few studied species populations is also highly seasonal, and appears to be coincident with seasonal increases in the abundance of planktonic and/or benthic microalgae. Two multi-year studies have shown that, in addition to within-year periodicity, major restructuring of the benthic community can occur as a result of anomalous (usually climate-related) perturbations of the benthic habitat. For example, during wet years freshwater-intolerant species disappear from the upper part of the estuary and from shallow areas of the bay. During a two-year drought these same species colonized the extreme upper end of the estuary in large numbers. Other aperiodic perturbations include localized instances of sediment erosion or deposition and algal mat accumulations that greatly depress abundance. Additionally, there is evidence (observations that the clam Macoma balthica establishes large populations only when the amphipod A. abdita is not abundant) that species interactions can contribute greatly to interannual variations. Thus, while community composition may change little over the long term, year-to-year predictability of species abundances is low. ?? 1985 Dr W. Junk Publishers.

Carbon pathways in the Seine river system

NASA Astrophysics Data System (ADS)

Marescaux, Audrey; Garnier, Josette; Thieu, Vincent

2016-04-01

Many papers have recently suggested that the anthropogenic perturbations of the carbon cycle have led to a significant increase in carbon export from terrestrial ecosystems to inland waters. The quantification of the carbon cascade (including fate of CO2 emissions) in highly anthropized river systems is thus essential to understand the response of aquatic systems. The Seine Basin where Paris and its environs represent 2/3 of its population, and agriculture is particularly intensive, is a eutrophic system. The main aim of this research is to understand and quantify how an excess of anthropogenic nutrients entering the Seine River system may locally enhance primary production, C sequestration, C respiration and CO2 emissions. The development of a new CO2 module in the pre-existing biogeochemical Riverstrahler model (Billen et al., 2007) should enable a refined calculation of the carbon budget. Besides calculation of the Respiration and Production activities along the entire river continuum, it will directly associate CO2 emissions. The CO2 modelling results will be confronted to (i) direct (in-situ) measurements with a non-dispersive infrared gas analyzer and (ii) indirect measurements based on total alkalinity, carbonate and pH along the Seine river system during the last decades, and (iii) calculations of a C metabolism budget. Billen, G., Garnier, J., Némery, J., Sebilo, M., Sferratore, A., Barles, S., Benoit P., Benoît, M. (2007). A long-term view of nutrient transfers through the Seine river continuum. Science of the Total Environment, 375(1-3), 80-97. http://doi.org/10.1016/j.scitotenv.2006.12.005

Radioactive Cs in the estuary sediments near Fukushima Daiichi Nuclear Power Plant.

PubMed

Yamasaki, Shinya; Imoto, Junpei; Furuki, Genki; Ochiai, Asumi; Ohnuki, Toshihiko; Sueki, Keisuke; Nanba, Kenji; Ewing, Rodney C; Utsunomiya, Satoshi

2016-05-01

The migration and dispersion of radioactive Cs (mainly (134)Cs and (137)Cs) are of critical concern in the area surrounding the Fukushima Daiichi Nuclear Power Plant (FDNPP). Considerable uncertainty remains in understanding the properties and dynamics of radioactive Cs transport by surface water, particularly during rainfall-induced flood events to the ocean. Physical and chemical properties of unique estuary sediments, collected from the Kuma River, 4.0km south of the FDNPP, were quantified in this study. These were deposited after storm events and now occur as dried platy sediments on beach sand. The platy sediments exhibit median particle sizes ranging from 28 to 32μm. There is increasing radioactivity towards the bottom of the layers deposited; approximately 28 and 38Bqg(-1) in the upper and lower layers, respectively. The difference in the radioactivity is attributed to a larger number of particles associated with radioactive Cs in the lower part of the section, suggesting that radioactive Cs in the suspended soils transported by surface water has decreased over time. Sequential chemical extractions showed that ~90% of (137)Cs was strongly bound to the residual fraction in the estuary samples, whereas 60~80% of (137)Cs was bound to clays in the six paddy soils. This high concentration in the residual fraction facilitates ease of transport of clay and silt size particles through the river system. Estuary sediments consist of particles <100μm. Radioactive Cs desorption experiments using the estuary samples in artificial seawater revealed that 3.4±0.6% of (137)Cs was desorbed within 8h. More than 96% of (137)Cs remained strongly bound to clays. Hence, particle size is a key factor that determines the travel time and distance during the dispersion of (137)Cs in the ocean. Copyright © 2016 Elsevier B.V. All rights reserved.

Time scales and mechanisms of estuarine variability, a synthesis from studies of San Francisco Bay

USGS Publications Warehouse

Cloern, J.E.; Nichols, F.H.

1985-01-01

This review of the preceding papers suggests that temporal variability in San Francisco Bay can be characterized by four time scales (hours, days-weeks, months, years) and associated with at least four mechanisms (variations in freshwater inflow, tides, wind, and exchange with coastal waters). The best understood component of temporal variability is the annual cycle, which is most obviously influenced by seasonal variations in freshwater inflow. The winter season of high river discharge is characterized by: large-scale redistribution of the salinity field (e.g. the upper estuary becomes a riverine system); enhanced density stratification and gravitational circulation with shortened residence times in the bay; decreased tissue concentrations of some contaminants (e.g. copper) in resident bivalves; increased estuarine inputs of river-borne materials such as dissolved inorganic nutrients (N, P, Si), suspended sediments, and humic materials; radical redistributions of pelagic organisms such as copepods and fish; low phutoplankton biomass and primary productivity in the upper estuary; and elimination of freshwater-intolerant species of macroalgae and benthic infauna from the upper estuary. Other mechanisms modulate this river-driven annual cycle: (1) wind speed is highly seasonal (strongest in summer) and causes seasonal variations in atmosphere-water column exchange of dissolved gases, resuspension, and the texture of surficial sediments; (2) seasonal variations in the coastal ocean (e.g. the spring-summer upwelling season) influence species composition of plankton and nutrient concentrations that are advected into the bay; and (3) the annual temperature cycle influences a few selected features (e.g. production and hatching of copepod resting eggs). Much of the interannual variability in San Francisco Bay is also correlated with freshwater inflow: wet years with persistently high river discharge are characterized by persistent winter-type conditions. Mechanisms of short-term variability are not as well understood, although some responses to storm events (pulses in residual currents from wind forcing, erosion of surficial sediments by wind waves, redistribution of fish populations) and the neap-spring tidal cycle (enhanced salinity stratification, gravitational circulation, and phytoplankton biomass during neap tides) have been quantified. In addition to these somewhat predictable features of variability are (1) largely unexplained episodic events (e.g. anomalous blooms of drift macroalgae), and (2) long-term trends directly attributable to human activities (e.g. introduction of exotic species that become permanent members of the biota). ?? 1985 Dr W. Junk Publishers.

76 FR 28457 - In the Matter of Certain Toner Cartridges and Components Thereof; Determination Not To Review an...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-05-17

...'s electronic docket (EDIS) at http://edis.usitc.gov . Hearing-impaired persons are advised that... United States Patent Nos. 5,903,803 and 6,128,454. The complaint named as respondents Ninestar Image Int...., Ltd. of Zhuhai, China; Zhuhai Seine Technology Co. of Zhuhai, China; Seine Image Int'l Co. of Shatin...

50 CFR 216.92 - Dolphin-safe requirements for tuna harvested in the ETP by large purse seine vessels.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 7 2010-10-01 2010-10-01 false Dolphin-safe requirements for tuna... MAMMALS REGULATIONS GOVERNING THE TAKING AND IMPORTING OF MARINE MAMMALS Dolphin Safe Tuna Labeling § 216.92 Dolphin-safe requirements for tuna harvested in the ETP by large purse seine vessels. (a) U.S...

50 CFR 216.92 - Dolphin-safe requirements for tuna harvested in the ETP by large purse seine vessels.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 50 Wildlife and Fisheries 9 2011-10-01 2011-10-01 false Dolphin-safe requirements for tuna... MAMMALS REGULATIONS GOVERNING THE TAKING AND IMPORTING OF MARINE MAMMALS Dolphin Safe Tuna Labeling § 216.92 Dolphin-safe requirements for tuna harvested in the ETP by large purse seine vessels. (a) U.S...

50 CFR 216.92 - Dolphin-safe requirements for tuna harvested in the ETP by large purse seine vessels.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 50 Wildlife and Fisheries 10 2012-10-01 2012-10-01 false Dolphin-safe requirements for tuna... MAMMALS REGULATIONS GOVERNING THE TAKING AND IMPORTING OF MARINE MAMMALS Dolphin Safe Tuna Labeling § 216.92 Dolphin-safe requirements for tuna harvested in the ETP by large purse seine vessels. (a) U.S...

50 CFR 216.92 - Dolphin-safe requirements for tuna harvested in the ETP by large purse seine vessels.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 50 Wildlife and Fisheries 10 2014-10-01 2014-10-01 false Dolphin-safe requirements for tuna... MAMMALS REGULATIONS GOVERNING THE TAKING AND IMPORTING OF MARINE MAMMALS Dolphin Safe Tuna Labeling § 216.92 Dolphin-safe requirements for tuna harvested in the ETP by large purse seine vessels. (a) U.S...

50 CFR 216.92 - Dolphin-safe requirements for tuna harvested in the ETP by large purse seine vessels.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 50 Wildlife and Fisheries 10 2013-10-01 2013-10-01 false Dolphin-safe requirements for tuna... MAMMALS REGULATIONS GOVERNING THE TAKING AND IMPORTING OF MARINE MAMMALS Dolphin Safe Tuna Labeling § 216.92 Dolphin-safe requirements for tuna harvested in the ETP by large purse seine vessels. (a) U.S...

A comparison of two gears for quantifying abundance of lotic-dwelling crayfish

USGS Publications Warehouse

Williams, Kristi; Brewer, Shannon K.; Ellersieck, Mark R.

2014-01-01

Crayfish (saddlebacked crayfish, Orconectes medius) catch was compared using a kick seine applied two different ways with a 1-m2 quadrat sampler (with known efficiency and bias in riffles) from three small streams in the Missouri Ozarks. Triplicate samples (one of each technique) were taken from two creeks and one headwater stream (n=69 sites) over a two-year period. General linear mixed models showed the number of crayfish collected using the quadrat sampler was greater than the number collected using either of the two seine techniques. However, there was no significant interaction with gear suggesting year, stream size, and channel unit type did not relate to different catches of crayfish by gear type. Variation in catch among gears was similar, as was the proportion of young-of-year individuals across samples taken with different gears or techniques. Negative binomial linear regression provided the appropriate relation between the gears which allows correction factors to be applied, if necessary, to relate catches by the kick seine to those of the quadrat sampler. The kick seine appears to be a reasonable substitute to the quadrat sampler in these shallow streams, with the advantage of ease of use and shorter time required per sample.

Linking macrobenthic communities structure and zonation patterns on sandy shores: Mapping tool toward management and conservation perspectives in Northern France

NASA Astrophysics Data System (ADS)

Rolet, Céline; Spilmont, Nicolas; Dewarumez, Jean-Marie; Luczak, Christophe

2015-05-01

In a context of intensifying anthropogenic pressures on sandy shores, the mapping of benthic habitat appears as an essential first step and a fundamental baseline for marine spatial planning, ecosystem-based management and conservation efforts of soft-sediment intertidal areas. Mapping allows representing intertidal habitats that are basically characterised by abiotic (e.g sediments, exposure to waves…) and biotic factors such as macrobenthic communities. Macrobenthic communities are known to show zonation patterns across sandy beaches and many studies highlighted the existence of three biological zones. We tested this general model of a tripartite biological division of the shore at a geographical scale of policy, conservation and management decisions (i.e. Northern France coastline), using multivariate analyses combined with the Direct Field Observation (DFO) method. From the upper to the lower shores, the majority of the beaches exhibited three macrobenthic communities confirming the existence of the tripartite biological division of the shore. Nevertheless, in some cases, two or four zones were found: (1) two zones when the drying zone located on the upper shore was replaced by littoral rock or engineering constructions and (2) four zones on beaches and estuaries where a muddy-sand community occurred from the drift line to the mid shore. The correspondence between this zonation pattern of macrobenthic communities and the EUNIS habitat classification was investigated and the results were mapped to provide a reference state of intertidal soft-sediment beaches and estuaries. Our results showed evidence of the applicability of this EUNIS typology for the beaches and estuaries at a regional scale (Northern France coastline) with a macroecological approach. In order to fulfil the requirements of the European Directives (WFD and MFSD), this mapping appears as a practical tool for any functional study on these coastal ecosystems, for the monitoring of anthropogenic activities and for the implementation of management plans concerning effective conservation strategies.

Anthropophile elements in river sediments: Overview from the Seine River, France

NASA Astrophysics Data System (ADS)

Chen, Jiu-Bin; Gaillardet, Jérôme; Bouchez, Julien; Louvat, Pascale; Wang, Yi-Na

2014-11-01

In contrast to larger river systems that drain relatively pristine basins, little is known about the sediment geochemistry of rivers impacted by intense human activities. In this paper, we present a systematic investigation of the anthropogenic overprints on element geochemistry in sediments of the human-impacted Seine River, France. Most elements are fractionated by grain size, as shown by the comparison between suspended particulate matter (SPM) and riverbank deposits (RBD). The RBD are particularly coarse and enriched in carbonates and heavy minerals and thus in elements such as Ba, Ca, Cr, Hf, Mg, Na, REEs, Sr, Ti, Th, and Zr. Although the enrichment/depletion pattern of some elements (e.g., K, REEs, and Zr) can largely be explained by a binary mixture between two sources, other elements such as Ag, Bi, Cr, Cd, Co, Cu, Fe, Mo, Ni, Pb, Sb, Sn, W, and Zn in SPM in Paris show that a third end-member having anthropogenic characteristics is needed to account for their enrichment at low water stage. These "anthropophile" elements, with high enrichment factors (EFs) relative to the upper continental crust (UCC), display a progressive enrichment downstream and different geochemical behaviors with respect to the hydrodynamic conditions (e.g., grain size) compared to elements having mainly a natural origin. Our findings emphasize the need for systematic studies of these anthropophile elements in other human-impacted rivers using geochemical normalization techniques, and stress the importance of studying the chemical variability associated with hydrodynamic conditions when characterizing riverine element geochemistry and assessing their flux to the ocean.

How seasonal forecast could help a decision maker: an example of climate service for water resource management

NASA Astrophysics Data System (ADS)

Viel, Christian; Beaulant, Anne-Lise; Soubeyroux, Jean-Michel; Céron, Jean-Pierre

2016-04-01

The FP7 project EUPORIAS was a great opportunity for the climate community to co-design with stakeholders some original and innovative climate services at seasonal time scales. In this framework, Météo-France proposed a prototype that aimed to provide to water resource managers some tailored information to better anticipate the coming season. It is based on a forecasting system, built on a refined hydrological suite, forced by a coupled seasonal forecast model. It particularly delivers probabilistic river flow prediction on river basins all over the French territory. This paper presents the work we have done with "EPTB Seine Grands Lacs" (EPTB SGL), an institutional stakeholder in charge of the management of 4 great reservoirs on the upper Seine Basin. First, we present the co-design phase, which means the translation of classical climate outputs into several indices, relevant to influence the stakeholder's decision making process (DMP). And second, we detail the evaluation of the impact of the forecast on the DMP. This evaluation is based on an experiment realised in collaboration with the stakeholder. Concretely EPTB SGL has replayed some past decisions, in three different contexts: without any forecast, with a forecast A and with a forecast B. One of forecast A and B really contained seasonal forecast, the other only contained random forecasts taken from past climate. This placebo experiment, realised in a blind test, allowed us to calculate promising skill scores of the DMP based on seasonal forecast in comparison to a classical approach based on climatology, and to EPTG SGL current practice.

Marine pollution originating from purse seine and longline fishing vessel operations in the Western and Central Pacific Ocean, 2003-2015.

PubMed

Richardson, Kelsey; Haynes, David; Talouli, Anthony; Donoghue, Michael

2017-03-01

Fisheries observer data recorded between 2003 and 2015 on-board purse seine and longline vessels operating in the Western and Central Pacific Ocean reported more than 10 000 pollution incidents within the exclusive economic zones (EEZs) of 25 Pacific countries and territories, and in international waters. A majority of the reported purse seine pollution incidents related to dumping of plastics waste. Other common pollution incidents related to oil spillages and to abandoned, lost or dumped fishing gear. Data analysis highlighted the need for increased monitoring, reporting, and enforcement of pollution violations by all types of fishing vessels operating in the Pacific region; a regional outreach and compliance assistance programme on marine pollution prevention and improvements in Pacific port waste reception facilities.

Microcystin-LR toxicity on dominant copepods Eurytemora affinis and Pseudodiaptomus forbesi of the upper San Francisco Estuary.

PubMed

Ger, Kemal A; Teh, Swee J; Goldman, Charles R

2009-08-15

This study investigates the toxicity and post-exposure effects of dissolved microcystin (MC-LR) on the dominant copepods of the upper San Francisco Estuary (SFE), where blooms of the toxic cyanobacteria Microcystis aeruginosa coincide with record low levels in the abundance of pelagic organisms including phytoplankton, zooplankton, and fish. The potential negative impact of Microcystis on the copepods Eurytemora affinis and Pseudodiaptomus forbesi has raised concern for further depletion of high quality fish food. Response of copepods to MC-LR (MC) was determined using a 48-h standard static renewal method for acute toxicity testing. Following exposure, a life table test was performed to quantify any post-exposure impacts on survival and reproduction. The 48-h LC-50 and LC-10 values for MC were 1.55 and 0.14 mg/L for E. affinis; and 0.52 and 0.21 mg/L for P. forbesi. Copepod populations recovered once dissolved MC was removed and cultures returned to optimal conditions, suggesting no post-exposure effects of MC on copepod populations. Dissolved microcystin above 0.14 mg/L proved likely to have chronic effects on the survival of copepods in the SFE. Since such high concentrations are unlikely, toxicity from dissolved microcystin is not a direct threat to zooplankton of the SFE, and other mechanisms such as dietary exposure to Microcystis constitute a more severe risk.

76 FR 283 - International Fisheries; Pacific Tuna Fisheries; Vessel Capacity Limit in the Purse Seine Fishery...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-01-04

... vessel capacity limit of 158,000 cubic meters for all vessels authorized by the IATTC to fish for tuna... EPO of 31,775 cubic meters. When Resolution C-02-03 was adopted, the United States was authorized to have a total of 39,228 cubic meters of total well volume capacity in the purse seine fishery, as well...

The Supreme Allied Commander’s Operational Approach

DTIC Science & Technology

2014-05-22

the Seine below Paris , and then began converging toward the northern line of march just below the first. A third line broke off from the second in a...toward the Seine Basin and Paris .” Therefore, in the aftermath of Goodwood Eisenhower felt both disappointed and deceived. After Goodwood, Eisenhower...command. Simultaneously, Bradley’s armies were to “[capture] Brest , [protect] the southern flank of the

Characteristics of the ichthyofauna of a temperate microtidal estuary with a reverse salinity gradient, including inter-decadal comparisons.

PubMed

Veale, L; Tweedley, J R; Clarke, K R; Hallett, C S; Potter, I C

2014-11-01

Data on the fish fauna of the Leschenault Estuary on the lower west coast of Australia were collected and used as a model to elucidate the characteristics of permanently open estuaries with a reverse salinity gradient, which undergo seasonal changes similar to many other estuaries with Mediterranean climate. Focus was placed on determining (1) the relationships of the number of species, density, life cycle category and species composition of fishes with region (within estuary), season and year and salinity, (2) whether species are partitioned along the lengths of such systems and (3) the extent and significance of any inter-decadal changes in species composition. The analyses and interpretation involved using multi-factorial permutational multivariate analysis of variance (PERMANOVA) and analysis of similarity (ANOSIM) designs, and three new or recently published visualization tools, i.e. modified non-metric multidimensional scaling (nMDS) plots, coherent species curves and segmented bubble plots. The base, lower, upper and apex regions of the Leschenault Estuary, along which the salinity increased in each season except in winter when most rainfall occurs, were sampled seasonally for the 2 years between winter 2008 and autumn 2010. Estuarine residents contributed twice as many individuals, but less than half the number of species as marine taxa. While the numbers of marine species and estuarine residents declined between the base or lower and apex regions, the individuals of marine species dominated the catches in the base region and estuarine residents in the other three regions. Ichthyofaunal composition in each region underwent conspicuous annual cyclical changes, due to time-staggered differences in recruitment among species, and changed sequentially along the estuary, both paralleling salinity trends. Different groups of species characterized the fauna in the different regions and seasons, thereby partitioning resources among species. The ichthyofauna of the apex region, in which salinities reached 54 and temperatures 36° C, recorded the highest maximum density and, in terms of abundance, was dominated (90%) by three atherinid species, emphasizing the ability of this family to tolerate extreme conditions. Comparisons between the data for 2008-2010 and 1994 demonstrate that the spotted hardyhead Craterocephalus mugiloides and the common hardyhead Atherinomorus vaigiensis had colonized and become abundant in the Leschenault Estuary in the intervening period. This represents a southwards extension of the distribution of these essentially tropical species during a period of increasing coastal water temperatures as a result of climate change. The abundance of weed-associated species, e.g. the western gobbleguts Ostorhinchus rueppellii and the soldier Gymnapistes marmoratus, increased, whereas that of the longfinned goby Favonigobius lateralis decreased, probably reflecting increases in eutrophication and siltation, respectively. © 2014 The Fisheries Society of the British Isles.

Identification et prise en charge des femmes ayant des antécédents familiaux de cancer du sein

PubMed Central

Heisey, Ruth; Carroll, June C.

2016-01-01

Résumé Objectif Résumer les meilleures données portant sur les stratégies d’identification et de prise en charge des femmes qui présentent des antécédents familiaux de cancer du sein. Sources d’information Une recherche a été effectuée sur PubMed à l’aide des mots-clés anglais suivants : breast cancer, guidelines, risk, family history, management et magnetic resonance imaging screening, entre 2000 et 2016. La plupart des données sont de niveau II. Message principal Une bonne anamnèse familiale est essentielle lors de l’évaluation du risque de cancer du sein afin d’identifier les femmes qui sont candidates à une recommandation en counseling génétique pour un éventuel test génétique. On peut sauver des vies en offrant aux femmes porteuses d’une mutation au gène BRCA des interventions chirurgicales de réduction des risques (mastectomie bilatérale prophylactique, salpingo-ovariectomie bilatérale). Il faut encourager toutes les femmes qui présentent des antécédents familiaux de cancer du sein à demeurer actives et à limiter leur consommation d’alcool à moins de 1 verre par jour; certaines femmes sont admissibles à la chimioprévention. Il faut offrir aux femmes dont le risque à vie de cancer du sein est de 20 à 25 % ou plus un dépistage poussé par imagerie par résonance magnétique en plus d’une mammographie. Conclusion Une vie saine et la chimioprévention (chez les candidates) pourraient réduire l’incidence du cancer du sein; le dépistage poussé pourrait entraîner une détection plus précoce. Le fait d’aiguiller des femmes porteuses d’une mutation au BRCA vers la chirurgie de réduction des risques sauve des vies. PMID:27737991

Transgressive systems tract development and incised-valley fills within a quaternary estuary-shelf system: Virginia inner shelf, USA

USGS Publications Warehouse

Foyle, A.M.; Oertel, G.F.

1997-01-01

High-frequency Quaternary glacioeustasy resulted in the incision of six moderate- to high-relief fluvial erosion surfaces beneath the Virginia inner shelf and coastal zone along the updip edges of the Atlantic continental margin. Fluvial valleys up to 5 km wide, with up to 37 m of relief and thalweg depths of up to 72 m below modern mean sea level, cut through underlying Pleistocene and Mio-Pliocene strata in response to drops in baselevel on the order of 100 m. Fluvially incised valleys were significantly modified during subsequent marine transgressions as fluvial drainage basins evolved into estuarine embayments (ancestral generations of the Chesapeake Bay). Complex incised-valley fill successions are bounded by, or contain, up to four stacked erosional surfaces (basal fluvial erosion surface, bay ravinement, tidal ravinement, and ebb-flood channel-base diastem) in vertical succession. These surfaces, combined with the transgressive oceanic ravinement that generally caps incised-valley fills, control the lateral and vertical development of intervening seismic facies (depositional systems). Transgressive stratigraphy characterizes the Quaternary section beneath the Virginia inner shelf where six depositional sequences (Sequences I-VI) are identified. Depositional sequences consist primarily of estuarine depositional systems (subjacent to the transgressive oceanic ravinement) and shoreface-shelf depositional systems; highstand systems tract coastal systems are thinly developed. The Quaternary section can be broadly subdivided into two parts. The upper part contains sequences consisting predominantly of inner shelf facies, whereas sequences in the lower part of the section consist predominantly of estuarine facies. Three styles of sequence preservation are identified. Style 1, represented by Sequences VI and V, is characterized by large estuarine systems (ancestral generations of the Chesapeake Bay) that are up to 40 m thick, have hemicylindrical wedge geometries, and occur within large, coast-oblique trending depressions (paleo-estuaries). Style 1 is dominated by fluvial through estuary-mouth depositional systems (Seismic Facies 1-4). Style 2 sequence preservation, represented by Sequences III and II, is dominantly an inner shelf and shoreface succession with a seaward-thickening tabular wedge geometry that does not exceed 15 m in thickness. These shoreface and inner shelf depositional systems of the upper transgressive systems tract (Seismic Facies 9) and highstand systems tract (Seismic Facies 7 and 11) are not associated with paleo-estuaries. Style 3 sequence preservation is represented by Sequence 1, the Holocene Sequence. It consists of lower transgressive systems tract fluvial-estuarine, lagoonal, and tidal-inlet fill deposits (Seismic Facies 1-6, and 8) overlain by upper transgressive systems tract shelf and shoreface sands (Seismic Facies 9). Style 3 has a crenulated wedge geometry, and is thickest beneath and seaward of the modern Chesapeake Bay mouth. It thins northward and landward onto Late Pleistocene interfluvial highs on the basinward side of the southern Delmarva Peninsula.

Determination of mass balance and entrainment in the stratified Duwamish River Estuary, King County, Washington

USGS Publications Warehouse

Stoner, J.D.

1972-01-01

During a study of the effects of waste-water input on the stratified Duwamish River estuary, intensive water-velocity and salinity measurements were made in both the lower salt wedge and the upper fresher water layer for tidal-cycle periods. The net movement of water and salt mass past a cross section during a tidal cycle was determined from integration of the measured rates of movement of water and salt past the section. The net volume of water that moved downstream past the section during the cycle agreed with the volume of fresh-water inflow at the head of the estuary within (1) 3.8 and 7.2 percent, respectively, for two studies made during periods of maximum and minimum tidal-prism thickness and identical inflow rates .of 312 cfs (cubic feet per second), and (2) 15 percent for one study made during a period of average tidal-prism thickness and an inflow rate of 1,280 cfs. For the three studies, the difference between salt mass transported upstream and downstream during the cycles ranged from 0.8 to 19 percent of the respective mean salt-mass transport. Water was entrained from the .salt-water wedge into the overlying layer of mixed fresh and salt water at tidal-cycle-average rates of 30 and 69 cfs per million square feet of interface for the inflow rates of 312 cfs, and 99 cfs per million square feet of interface for an inflow rate of 1,280 cfs. At a constant inflow rate, the rate of entrainment of salt-wedge water in the Duwamish River estuary more than doubled for a doubling of tidal-prism thickness. It also doubled for a quadrupling of inflow rate at about constant tidal-prism thickness.

Coupled effects of vertical mixing and benthic grazing on phytoplankton populations in shallow, turbid estuaries

USGS Publications Warehouse

Koseff, Jeffrey R.; Holen, Jacqueline K.; Monismith, Stephen G.; Cloern, James E.

1993-01-01

Coastal ocean waters tend to have very different patterns of phytoplankton biomass variability from the open ocean, and the connections between physical variability and phytoplankton bloom dynamics are less well established for these shallow systems. Predictions of biological responses to physical variability in these environments is inherently difficult because the recurrent seasonal patterns of mixing are complicated by aperiodic fluctuations in river discharge and the high-frequency components of tidal variability. We might expect, then, less predictable and more complex bloom dynamics in these shallow coastal systems compared with the open ocean. Given this complex and dynamic physical environment, can we develop a quantitative framework to define the physical regimes necessary for bloom inception, and can we identify the important mechanisms of physical-biological coupling that lead to the initiation and termination of blooms in estuaries and shallow coastal waters? Numerical modeling provides one approach to address these questions. Here we present results of simulation experiments with a refined version of Cloern's (1991) model in which mixing processes are treated more realistically to reflect the dynamic nature of turbulence generation in estuaries. We investigated several simple models for the turbulent mixing coefficient. We found that the addition of diurnal tidal variation to Cloern's model greatly reduces biomass growth indicating that variations of mixing on the time scale of hours are crucial. Furthermore, we found that for conditions representative of South San Francisco Bay, numerical simulations only allowed for bloom development when the water column was stratified and when minimal mixing was prescribed in the upper layer. Stratification, however, itself is not sufficient to ensure that a bloom will develop: minimal wind stirring is a further prerequisite to bloom development in shallow turbid estuaries with abundant populations of benthic suspension feeders.

Present-day palynomorph deposits in an estuarine context: The case of the Loire Estuary

NASA Astrophysics Data System (ADS)

Ganne, A.; Leroyer, C.; Penaud, A.; Mojtahid, M.

2016-12-01

Estuaries are dynamic systems that collect terrestrial, aerial, fluvial, and marine inputs, including organic microfossils, which, when fossilized and observed on palynological slides, are also referred to as palynomorphs (pollen and non-pollen palynomorphs including dinoflagellate cysts or dinocysts). To understand these organic microfossil deposit arrangements across the Loire estuary, palynomorph counts were undertaken in 31 surface sediments collected across longitudinal and perpendicular transects of the Loire active riverbed, from the upper inner estuary to the river mouth. Main results suggest a large homogeneity of the pollen content throughout the entire upstream-downstream transect, with a dominance of arboreal taxa (Pinus, Quercus, Alnus) and Poaceae. Also, perpendicular transects across the channel show a great similarity between the muddy surface layers and the underlying consolidated clay layers. This is probably due to: i) homogeneity of the landscape at a regional scale (large catchment area of the Loire River), and ii) complex hydrodynamic processes involving strong mixing of the palynological signal. Furthermore, despite scarce woodlands in the regional landscape, arboreal pollen (especially Pinus and Quercus) represents > 60% of the total pollen percentages. This could be explained by several factors: i) generally higher arboreal pollen production and dispersion as compared to herbaceous taxa, ii) distant inputs from marine areas downstream and/or forested regions far upstream, and iii) differential selection or inheritance from underlying sediments. Differentiation between the outer and inner estuarine environments was furthermore possible using a ratio of terrestrial versus marine palynological indicators. Among the dinocyst assemblages (marine realm), the euryhaline species Lingulodinium machaerophorum predominates; this taxon being very sensitive to strong water column stratification. Also, total dinocyst concentration increased upstream, which may result from the tidal forcing pushing salinity upriver beneath outflowing river water, and thus signing the estuarine turbidity maximum influence within the Loire River.

Spatial and temporal variation in seagrass coverage in Southwest Florida: assessing the relative effects of anthropogenic nutrient load reductions and rainfall in four contiguous estuaries.

PubMed

Tomasko, D A; Corbett, C A; Greening, H S; Raulerson, G E

2005-08-01

The estuaries of Tampa Bay, Sarasota Bay, Lemon Bay, and Upper Charlotte Harbor are contiguous waterbodies located within the subtropical environment of Southwest Florida. Based on an examination of rainfall data over the period of record (1916-2001) within the watersheds of these estuaries, there is no evidence for spatial differences (at the watershed level) or monotonic trends in annual rainfall. During the 1980s, nitrogen loads into Tampa Bay and Sarasota Bay (generated primarily by domestic wastewater treatment facilities) were reduced by 57% and 46%, respectively. In response, both Tampa Bay and Sarasota Bay have lower phytoplankton concentrations, greater water clarity and more extensive seagrass coverage in 2002 than in the early 1980s. As there is no evidence of a concurrent trend in rainfall during the period of 1982-2001, it is unlikely that variation in rainfall can account for the observed increase in seagrass coverage in these two bays. In contrast, seagrass coverage has remained relatively constant since the mid 1980s in Lemon Bay and Charlotte Harbor. Domestic wastewater treatment facilities are minor sources of nitrogen to Lemon Bay, and water clarity in Charlotte Harbor varies mostly as a function of dissolved organic matter and non-chlorophyll associated turbidity, not phytoplankton levels. Even in estuaries that share boundaries and are within 100 km of each other, varied responses to anthropogenic changes and natural phenomena were observed in water quality and associated seagrass extent. Resource management strategies must take into account system-specific factors-not all strategies will result in similar results in different systems.

Synergies between climate anomalies and hydrological modifications facilitate estuarine biotic invasions.

PubMed

Winder, Monika; Jassby, Alan D; Mac Nally, Ralph

2011-08-01

Environmental perturbation, climate change and international commerce are important drivers for biological invasions. Climate anomalies can further increase levels of habitat disturbance and act synergistically to elevate invasion risk. Herein, we use a historical data set from the upper San Francisco Estuary to provide the first empirical evidence for facilitation of invasions by climate extremes. Invasive zooplankton species did not become established in this estuary until the 1970s when increasing propagule pressure from Asia coincided with extended drought periods. Hydrological management exacerbated the effects of post-1960 droughts and reduced freshwater inflow even further, increasing drought severity and allowing unusually extreme salinity intrusions. Native zooplankton experienced unprecedented conditions of high salinity and intensified benthic grazing, and life history attributes of invasive zooplankton were advantageous enough during droughts to outcompete native species and colonise the system. Extreme climatic events can therefore act synergistically with environmental perturbation to facilitate the establishment of invasive species. © 2011 Blackwell Publishing Ltd/CNRS.

Space-time cluster analysis of sea lice infestation (Caligus clemensi and Lepeophtheirus salmonis) on wild juvenile Pacific salmon in the Broughton Archipelago of Canada.

PubMed

Patanasatienkul, Thitiwan; Sanchez, Javier; Rees, Erin E; Pfeiffer, Dirk; Revie, Crawford W

2015-06-15

Sea lice infestation levels on wild chum and pink salmon in the Broughton Archipelago region are known to vary spatially and temporally; however, the locations of areas associated with a high infestation level had not been investigated yet. In the present study, the multivariate spatial scan statistic based on a Poisson model was used to assess spatial clustering of elevated sea lice (Caligus clemensi and Lepeophtheirus salmonis) infestation levels on wild chum and pink salmon sampled between March and July of 2004 to 2012 in the Broughton Archipelago and Knight Inlet regions of British Columbia, Canada. Three covariates, seine type (beach and purse seining), fish size, and year effect, were used to provide adjustment within the analyses. The analyses were carried out across the five months/datasets and between two fish species to assess the consistency of the identified clusters. Sea lice stages were explored separately for the early life stages (non-motile) and the late life stages of sea lice (motile). Spatial patterns in fish migration were also explored using monthly plots showing the average number of each fish species captured per sampling site. The results revealed three clusters for non-motile C. clemensi, two clusters for non-motile L. salmonis, and one cluster for the motile stage in each of the sea lice species. In general, the location and timing of clusters detected for both fish species were similar. Early in the season, the clusters of elevated sea lice infestation levels on wild fish are detected in areas closer to the rivers, with decreasing relative risks as the season progresses. Clusters were detected further from the estuaries later in the season, accompanied by increasing relative risks. In addition, the plots for fish migration exhibit similar patterns for both fish species in that, as expected, the juveniles move from the rivers toward the open ocean as the season progresses The identification of space-time clustering of infestation on wild fish from this study can help in targeting investigations of factors associated with these infestations and thereby support the development of more effective sea lice control measures. Copyright © 2015 Elsevier B.V. All rights reserved.

Seasonal and spatial distribution patterns of finfish and selected invertebrates in coastal lagoons of northeastern Florida, 2002-2004

USGS Publications Warehouse

Turtora, Michael; Schotman, Elizabeth M.

2010-01-01

The U.S. Geological Survey conducted a survey of juvenile fisheries resources, in cooperation with the St. Johns River Water Management District and Volusia County, to establish baseline data on spatial and temporal distribution patterns of estuarine fish. The survey was conducted from November 2001 to March 2005 and the baseline data established for the survey in the Northern Coastal Basins were collected from January 2002 to December 2004. The study area included the bar-built estuaries ranging from just north of St. Augustine, Florida, south to Ponce de Leon Inlet. Sampling protocols developed by the Florida Fish and Wildlife Research Institute for their statewide Fisheries Independent Monitoring (FIM) program were replicated to allow for comparability with FIM program results. Samples were collected monthly from randomly selected stations based on a geographically stratified design. Finfish and selected invertebrates were collected using a 21.3-meter center-bag seine with a 3-millimeter mesh, and a 6.1-meter otter trawl with a 3-millimeter mesh liner. Total estimated fish and selected invertebrate densities were similar to estimates from FIM projects in adjacent areas and were characterized by similar dominant species. Preliminary analysis indicates that observed species distribution patterns were mainly a function of proximity to the three inlets within the study area. The two regions encompassing the northern Tolomato River and the Tomoka River and Basin are farthest from inlets and appear to function as oligohaline nursery areas. Those two areas had the greatest estimated densities of shellfish and juvenile sciaenid (drum) species associated with oligohaline waters (for example, Micropogonias undulatus, Sciaenops ocellatus and Cynoscion nebulosus). Samples near inlets, and between the two northern inlets, had greater estimated densities of species limited to euhaline waters, including juvenile clupeids collected at relatively high abundance and species of marine strays collected in low abundance. Based on correspondence analysis, seasonal variation dominated the ordination of seine samples and spatial variation dominated the ordination of trawl samples; this was due to differences in the number and timing of taxa found near inlets versus oligohaline regions. The absence of seagrass habitat in the Northern Coastal Basins is reflected by the absence of a seagrass-fish assemblage.

OPERATION COBRA. Deliberate Attack, Exploitation

DTIC Science & Technology

1984-05-25

to attack Sens, then continue to Troyes , on the Seine River. CCA was in the north, crossing the Loing River at Souppes against light resistance and...advanced from Troyes and prepared positions close to Sens. Under strong artillery support, a task force from CCA (TF Oden) attacked the enemy frontally...movement towards the Seine River on 24 August with an advance toward Troyes . Facing the combat command were what remained of the 51st SS Brigade, light

Training Implications of the Tactical Aircraft Recapitalization

DTIC Science & Technology

2008-06-13

and Wayne L. Waag , The Use of Simulators for Training In-Flight and Emergency Procedures in AGARD-AG-248 (Neuilly-Sur-Seine, France: Advisory Group...11 Edward E. Eddowes and Wayne L. Waag , The Use of Simulators for Training In-Flight and Emergency Procedures in AGARD-AG-248 (Neuilly-Sur...17 Edward E. Eddowes and Wayne L. Waag , The Use of Simulators for Training In-Flight and Emergency Procedures in AGARD-AG-248 (Neuilly-Sur-Seine

Rotorcraft System Identification (L’Identification des Systemes de Voilures ;Tournantes)

DTIC Science & Technology

1991-09-01

Icgroupe detraivail No.18 sur t~idenrifleariisndes systtmes tie vcilures trturnatnt~s. a proe~dde lapplicatioindte toure la gamme tic mdtboties...AD-A244 250 -liii ii _,AGARD-AR-280 , AGAL?1Mw ADVISORY GROUP FOR AEROSPACE RESEARCH & DEVELOPMENT ag 7 RUE ANCELLE 92200 NEUILLY SUR SEINE FRANCE...DEVELOPMENT 7 RUE ANCELLE 92200 NEUILLY SUR SEINE FRANCE AGARD ADVISORY REPORT 280 Rotorcraft System Identification (L’ldcntification des Syst~mes de Voidures

The distribution of nutrients, dissolved oxygen and chlorophyll a in the upper Gulf of Nicoya, Costa Rica, a tropical estuary.

PubMed

Palter, Jaime; Coto, Sandra León; Ballestero, Daniel

2007-06-01

In the Gulf of Nicoya on the Pacific Coast of Costa Rica, nutrient rich equatorial subsurface water (ESW) is upwelled in much of the lower gulf. These offshore waters are often regarded as the major source of nutrients to the gulf. However, for most of the year, the ESW has little influence on the nutrient content of the upper gulf, which has a distinct character from the lower gulf. The upper gulf, extending 40 km north of the restriction between Puntarenas Peninsula and San Lucas Island, is bordered primarily by mangrove swamps, is less than 20 m deep, and is less saline than the lower gulf. We surveyed the upper gulf for dissolved inorganic nitrogen, phosphate, silicate, dissolved oxygen, and chlorophyll in November 2000, January and July 2001. All nutrients are more concentrated in the upper gulf during the rainy and transitional seasons than the dry season, significantly so for phosphate and silicate. Throughout the year, nutrients tend to be much more concentrated in the less saline water of the upper gulf. This trend indicates that discharge from the Tempisque River predominantly controls spatial and temporal nutrient variability in the upper gulf. However, nutrient rich ESW, upwelled offshore and mixed to form a mid-temperature intermediate water, may enter the inner gulf to provide an important secondary source of nutrients during the dry season.

Methodological issues affecting the study of fish parasites. II. Sampling method affects ectoparasite studies.

PubMed

Kvach, Yuriy; Ondračková, Markéta; Janáč, Michal; Jurajda, Pavel

2016-08-31

In this study, we assessed the impact of sampling method on the results of fish ectoparasite studies. Common roach Rutilus rutilus were sampled from the same gravel pit in the River Dyje flood plain (Czech Republic) using 3 different sampling methods, i.e. electrofishing, beach seining and gill-netting, and were examined for ectoparasites. Not only did fish caught by electrofishing have more of the most abundant parasites (Trichodina spp., Gyrodactylus spp.) than those caught by beach seining or gill-netting, they also had relatively rich parasite infracommunities, resulting in a significantly different assemblage composition, presumably as parasites were lost through handling and 'manipulation' in the net. Based on this, we recommend electrofishing as the most suitable method to sample fish for parasite community studies, as data from fish caught with gill-nets and beach seines will provide a biased picture of the ectoparasite community, underestimating ectoparasite abundance and infracommunity species richness.

Suspended matters mean distribution and seasonal cycle in the Río de la Plata estuary and the adjacent shelf from MODIS and in situ observations

NASA Astrophysics Data System (ADS)

Simionato, Claudia G.; Moreira, Diego; Gohin, Francis; Cayocca, Florence; Tejedor, Moira Luz Clara

2013-04-01

Draining the second largest basin of South America, the Río de la Plata is one of the largest and most turbid estuaries of the world. Its fresh water plume impacts the properties of the shelf for more than 500 km. Even though turbidity in this estuary has been the object of several papers, inorganic suspended matter has deserved less attention because of the lack of observations. In this sense, daily 1 km resolution MODIS-Aqua data were processed for surface inorganic suspended matter in the estuary and the adjacent shelf using the IFREMER algorithm for Type 2 waters, providing 10 years of observations. The aim of this work is to analyze those data to characterize mean values and variability on seasonal time scales, so as to provide clues about the involved physical mechanisms. The analysis is complemented with in situ observations collected during six cruises to the area and from fixed instruments deployed during the FREPLATA/FFEM Experiment 2009-2010. The comparison between direct and remote sensed observations is very satisfactory, showing a good agreement in the magnitude and spatial distribution of the mean suspended sediments concentration, its standard deviation, so as the seasonal variability. Results suggest that the surface suspended matters' concentration in the Río de la Plata is strongly associated with the hydrodynamics and the scales of variability of the tributaries and the winds. All along the year the concentration of surface suspended matter maximizes along the southern (Argentinean) coast of the upper and intermediate estuary and at the tips of Samborombón Bay. This fact seems to be linked in part with the higher solid discharge of the Paraná River -flowing along the southern coast of the estuary- compared to the Uruguay River -which flows following the northern coast-. The former receives most of the sediments load to the Río de la Plata from the Bermejo River located about 1000 km upstream the estuary's head. The observed mean pattern also seems to be related to the stronger tidal currents along the southern coast of the estuary and at the tips of Samborombón Bay, which would act resuspending sediments near the bottom. Then wind waves during storms would enhance vertical mixing, consequently increasing surface concentration. The concentration of suspended sediments rapidly falls seawards the Barra del Indio shoal, in the area of the salt wedge. Probably this is, at least in part, a consequence of flocculation. In the outer estuary, suspended matters concentration seems to be also strongly associated to the wind-forced motion of the fresh water plume. Suspended matter concentration exhibits a maximum in winter and a minimum in summer, that cannot be fully explained in terms of the cycle of the solid discharge of the tributaries, but seems to be related to a raise in the frequency of the storms in winter, increasing the frequency of strong wind events in the region and, therefore, a growth of the frequency of higher wind waves, which resuspend the fine sediments and mix the column in this very shallow part of the estuary.

Heterometric sediment and benthic micro-habitat: In situ and experimental approaches.

NASA Astrophysics Data System (ADS)

Navon, Maxime; Dauvin, Jean-Claude; Lesourd, Sandric

2016-04-01

The eastern Bay of Seine and its estuary are characterized by complex sediment structures with high temporal, spatial and vertical heterogeneities. As the result of different hydrodynamics forcing, estuary is a particular area with fine sediment accumulation since the last decades. This complex system involves particular relationships between benthic species and the environment. Dominant species show particular traits of life: bentho-pelagic reproductive cycle, burrowing, tubicoulous, surface and subsurface species. Moreover, species behaviours are different according to the sediment properties: grain size, stratification, texture, silt and clay contents… Although benthic macrofauna and sediment relationship is often describe as the major factor structuring benthic communities, no spatial and temporal relationships has been highlighted in this area. So, our study is focused on the relationship between species and sediment at the individual scale and on micro-habitats. The aim of the study is to define the macrofauna vertical distribution to understand how the sediment structure acts on organisms and the organism behaviour in a heterometric sediment context, i.e. how organisms act in return on the sediment structure. An in situ approach is used to answer these questions with four campaigns on board on the Oceanographic Vessel 'Le Côtes de la Manche'. A total of 43 cores (16 cm diameter, 35 cm high) in three typical sediment facies are sampled. Cores are analysed with Computer-Aided Tomography scan (Cyceron Laboratory, Caen) to 3D visualize organisms and to determine volumetric space occupation by biogenic structures. The same cores are transversally cut to check the species out and to analyse sediment parameters (grain size, organic matter and other chemical components on XRF device). Results show that most of the organism are closed to the surface sediment but also that some species, even small size individuals, are found deeper in the sediment-column until 9 cm depth. This approach gives nondestructive 3D picture on the organism position in sediment and provides information on the manner how sediment structure acts on organisms and in return how organisms disturb sediment structure.

Avulsion at a drift-dominated mesotidal estuary: The Chubut River outlet, Patagonia, Argentina

NASA Astrophysics Data System (ADS)

Isla, Federico; Espinosa, Marcela; Rubio, Belén; Escandell, Alejandra; Gerpe, Marcela; Miglioranza, Karina; Rey, Daniel; Vilas, Federico

2015-10-01

The Chubut River flows from the Andes to the Atlantic Ocean, and is interrupted by a single dam built at the middle valley. The lower valley is dominated by the aggradation of an alluvial plain induced by a complex of spits that enclosed the inlet in the last 5000 years. The river has reduced its flow because the blocking of the upper basin by terminal moraines during the Upper Pleistocene. At least the last two marine transgressions have flooded this estuary, and contributed to the aggradation during regressions. The area is of particular interest in regard to irrigation channels practiced since the XIX century. Today, the mean monthly flow is less than 10 m3/s although peaks of 95 m3/s have been recorded in Gaiman in July 2001. The dynamics of the estuary is dominated by waves (wave-dominated estuary) as tidal effects attenuate in less than 5 km. Three vibracores were collected within this floodplain: (a) at Gaiman, an area without any effect of the sea (35 km from the coast); (b) at Trelew, at the former avulsion plain of the river (18 km from the coast); and (c) at Playa Magagna, a saltmarsh located 0.4 km from the beach. At the Gaiman core (1.54 m long) fresh-water epiphytic diatoms dominate (Epithemia sorex, Cocconeis placentula, Ulnaria ulna) suggesting the aggradation of an alluvial plain. The Trelew core (2.19 m long) was collected from a deltaic plain. It was composed by fine sand with organic matter at the base that evolved into silty layers to the top. Several unconformities and laminae with heavy minerals were detected by their geochemical composition analysed by micro X-ray fluorescence (Itrax XRF core scanner). Fine-sand laminated layers were perfectly detected by their high content in S and Cl. On the other hand, mud layers presented lower content in Mg and Al with increments in Ca and V. The core from the marsh area (1.67 m long) was analysed in terms of the diatom evolution in order to detect Holocene sea-level and salinity effects. The sand flats from the bottom of the core were dominated by Nitzchia navicularis (mesohalobous and benthic taxa) and evolved into mixed flats, mudflats and marshes to the top. Sharp contacts have been detected between these facies, with wavy and lenticular bedding characterising the mixed flat deposits. The middle of the sequence is dominated by a coastal marine diatom (Paralia sulcata) while the top was dominated by Pinnularia borealis, an aerophilous and brackish/freshwater taxa.

Modeling ecosystem processes with variable freshwater inflow to the Caloosahatchee River Estuary, southwest Florida. I. Model development

NASA Astrophysics Data System (ADS)

Buzzelli, Christopher; Doering, Peter H.; Wan, Yongshan; Sun, Detong; Fugate, David

2014-12-01

Variations in freshwater inflow have ecological consequences for estuaries ranging among eutrophication, flushing and transport, and high and low salinity impacts on biota. Predicting the potential effects of the magnitude and composition of inflow on estuaries over a range of spatial and temporal scales requires reliable mathematical models. The goal of this study was to develop and test a model of ecosystem processes with variable freshwater inflow to the sub-tropical Caloosahatchee River Estuary (CRE) in southwest Florida from 2002 to 2009. The modeling framework combined empirically derived inputs of freshwater and materials from the watershed, daily predictions of salinity, a box model for physical transport, and simulation models of biogeochemical and seagrass dynamics. The CRE was split into 3 segments to estimate advective and dispersive transport of water column constituents. Each segment contained a sub-model to simulate changes in the concentrations of organic nitrogen and phosphorus (ON and OP), ammonium (NH4+), nitrate-nitrite (NOx-), ortho-phosphate (PO4-3), phytoplankton chlorophyll a (CHL), and sediment microalgae (SM). The seaward segment also had sub-models for seagrasses (Halodule wrightii and Thalassia testudinum). The model provided realistic predictions of ON in the upper estuary during wet conditions since organic nitrogen is associated with freshwater inflow and low salinity. Although simulated CHL concentrations were variable, the model proved to be a reliable predictor in time and space. While predicted NOx- concentrations were proportional to freshwater inflow, NH4+ was less predictable due to the complexity of internal cycling during times of reduced freshwater inflow. Overall, the model provided a representation of seagrass biomass changes despite the absence of epiphytes, nutrient effects, or sophisticated translocation in the formulation. The model is being used to investigate the relative importance of colored dissolved organic matter (CDOM) vs. CHL in submarine light availability throughout the CRE, assess if reductions in nutrient loads are more feasible by controlling freshwater quantity or N and P concentrations, and explore the role of inflow and flushing on the fates of externally and internally derived dissolved and particulate constituents.

Unifying Capability Integration Analysis - Initial Insights

DTIC Science & Technology

2011-09-01

mesure d’accomplir; Gestion des capacités – la mesure dans laquelle les FC seront en mesure de combler leurs besoins en matière de ...forces (DF) au sein du ministère de la Défense nationale (MDN). Au cours des quatre dernières années, des militaires et des analystes en matière de ...centralisée et descendante de développement des forces (DF) au sein du ministère de la

The Fate of Polyol-Made ZnO and CdS Nanoparticles in Seine River Water (Paris, France).

PubMed

da Rocha, Alice; Sivry, Yann; Gelabert, Alexandre; Beji, Zyed; Benedetti, Marc F; Menguy, Nicolas; Brayner, Roberta

2015-05-01

This study aims to characterize nanoparticles with different compositions and structures as well as seeing their evolutions over time in a natural environment such as Seine river water (Paris, France). Face centered cubic (fcc) and hexagonal (hcp) CdS as well as hexagonal (hcp) ZnO nanoparticles were synthesized by the Polyol method. CdS nanoparticles (i) cfc structure: are agglomerated, present 100 nm length with heterogeneous diameter and 10 m2 g(-1) specific surface area (S(g)) from Brunauer Emett and Teller (BET) measurements; (ii) hcp structure: 20 nm and S(g) = 67 m2 g(-1). ZnO hcp nanoparticles presents 50 nm length and 15 nm diameter and S(g) = 54 m2 g(-1). These results are in agreement with X-ray diffraction (XRD), and small angle X-ray scattering (SAXs). After 48 h interaction with Seine river water, cryo-TEM analysis showed that ZnO nanoparticles form spherical agglomerates with 300 nm diameter; CdS nanoparticles (fcc) are agglomerated presenting large diameters (> 500 nm); and CdS nanoparticles (hcp) are not agglomerated and present the same characteristics of the starting material. After 168h of contact with Seine river water, CdS (fcc) presents only 14% of dissolution, CdS (hcp) presents both 60% dissolution and 30% reprecipitation in a cadmium carbonate form and finally almost 90% of ZnO nanoparticles are dissolved.

Influence of the water quality improvement on fish population in the Seine River (Paris, France) over the 1990-2013 period.

PubMed

Azimi, Sam; Rocher, Vincent

2016-01-15

Over the past 20 years, rules concerning wastewater treatment and quality of water discharged into the environment have changed considerably. Huge investments have been made in Paris conurbation to improve waste water treatment processes in accordance with the European Water Framework Directive. The interdepartmental association for sewage disposal in Paris conurbation (SIAAP) carried out a monitoring of both fish assemblages and water quality in the Seine River around the Paris conurbation (France) since the early 90's. The main goal of this study was to estimate the influence of the water quality improvement on fish. On one hand, the study confirmed the improvement of the water quality (dissolved oxygen, ammonia nitrogen, organic matter) in the Seine River, mostly focused downstream of Paris conurbation. On the other hand, an increase of the number of species occurred from 1990 (14) to 2013 (21). Moreover, changes in the river Seine assemblages happened over that 23-year period with emergence of sensitive species (ruffe, scalpin and pike-perch). The improvement of the water quality was also reported with respect to the Index of Biotic Integrity (IBI). However, no variation of pollutant concentrations in roach, eel and chub muscles has been observed. An exceedance of the environmental quality standards have even been reported all over this period as regards mercury and organochlorine.

Rainy Lake wrench zone: An example of an Archaean subprovince boundary in northwestern Ontario

NASA Technical Reports Server (NTRS)

Poulsen, K. H.

1986-01-01

The Superior Province of the Canadian Shield comprises an alternation of subprovinces with contrasting lithological, structural and metamorphic styles. Rocks of the Rainly Lake area form a fault bounded wedge between two of these subprovinces, the Wabigoon granite-greenstone terrain to the north and the Quetico metasedimentary terrain to the south. The Quetico and Seine River-Rainy Lake Faults bound this wedge within which interpretation of the stratigraphy has been historically contentious. In the eastern part of the wedge, volcanic rocks and coeval tonalitic sills are unconformably overlain by fluviatile conglomerate and arenite of the Seine Group; in the western part of the wedge, metamorphosed wacke and mudstone of the Coutchiching Group are cut by granodioritic plutons. The Coutchiching Group has previously been correlated with the Seine Group and with the turbiditic Quetico metasediments of the Quetico Subprovince and these correlations are the cornerstone of earlier tectonic models which relate the subprovinces. The structural geology of the Rainy Lake area is characterized by attributes which compare favourably with the known characteristics of dextral wrench or 'transpressive zones based both on experimental data and natural examples. Much of this deformation involved the Seine Group, the youngest stratigraphic unit in the area, and predates the emplacement of late-to-post-tectonic granodioritic plutons for which radiometric data indicate a Late Archean age.

Application of a multidisciplinary and integrative weight-of-evidence approach to a 1-year monitoring survey of the Seine River.

PubMed

Barjhoux, Iris; Fechner, Lise C; Lebrun, Jérémie D; Anzil, Adriana; Ayrault, Sophie; Budzinski, Hélène; Cachot, Jérôme; Charron, Laetitia; Chaumot, Arnaud; Clérandeau, Christelle; Dedourge-Geffard, Odile; Faburé, Juliette; François, Adeline; Geffard, Olivier; George, Isabelle; Labadie, Pierre; Lévi, Yves; Munoz, Gabriel; Noury, Patrice; Oziol, Lucie; Quéau, Hervé; Servais, Pierre; Uher, Emmanuelle; Urien, Nastassia; Geffard, Alain

2016-06-08

Quality assessment of environments under high anthropogenic pressures such as the Seine Basin, subjected to complex and chronic inputs, can only be based on combined chemical and biological analyses. The present study integrates and summarizes a multidisciplinary dataset acquired throughout a 1-year monitoring survey conducted at three workshop sites along the Seine River (PIREN-Seine program), upstream and downstream of the Paris conurbation, during four seasonal campaigns using a weight-of-evidence approach. Sediment and water column chemical analyses, bioaccumulation levels and biomarker responses in caged gammarids, and laboratory (eco)toxicity bioassays were integrated into four lines of evidence (LOEs). Results from each LOE clearly reflected an anthropogenic gradient, with contamination levels and biological effects increasing from upstream to downstream of Paris, in good agreement with the variations in the structure and composition of bacterial communities from the water column. Based on annual average data, the global hazard was summarized as "moderate" at the upstream station and as "major" at the two downstream ones. Seasonal variability was also highlighted; the winter campaign was least impacted. The model was notably improved using previously established reference and threshold values from national-scale studies. It undoubtedly represents a powerful practical tool to facilitate the decision-making processes of environment managers within the framework of an environmental risk assessment strategy.

Impact of the bottom drag coefficient on saltwater intrusion in the extremely shallow estuary

NASA Astrophysics Data System (ADS)

Lyu, Hanghang; Zhu, Jianrong

2018-02-01

The interactions between the extremely shallow, funnel-shaped topography and dynamic processes in the North Branch (NB) of the Changjiang Estuary produce a particular type of saltwater intrusion, saltwater spillover (SSO), from the NB into the South Branch (SB). This dominant type of saltwater intrusion threatens the winter water supplies of reservoirs located in the estuary. Simulated SSO was weaker than actual SSO in previous studies, and this problem has not been solved until now. The improved ECOM-si model with the advection scheme HSIMT-TVD was applied in this study. Logarithmic and Chézy-Manning formulas of the bottom drag coefficient (BDC) were established in the model to investigate the associated effect on saltwater intrusion in the NB. Modeled data and data collected at eight measurement stations located in the NB from February 19 to March 1, 2017, were compared, and three skill assessment indicators, the correlation coefficient (CC), root-mean-square error (RMSE), and skill score (SS), of water velocity and salinity were used to quantitatively validate the model. The results indicated that the water velocities modeled using the Chézy-Manning formula of BDC were slightly more accurate than those based on the logarithmic BDC formula, but the salinities produced by the latter formula were more accurate than those of the former. The results showed that the BDC increases when water depth decreases during ebb tide, and the results based on the Chézy-Manning formula were smaller than those based on the logarithmic formula. Additionally, the landward net water flux in the upper reaches of the NB during spring tide increases based on the Chézy-Manning formula, and saltwater intrusion in the NB was enhanced, especially in the upper reaches of the NB. At a transect in the upper reaches of the NB, the net transect water flux (NTWF) is upstream in spring tide and downstream in neap tide, and the values produced by the Chézy-Manning formula are much larger than those based on the logarithmic formula. Notably, SSO during spring tide was 1.8 times larger based on the Chézy-Manning formula than that based on the logarithmic formula. The model underestimated SSO and salinity at the hydrological stations in the SB based on the logarithmic BDC formula but successfully simulated SSO and the temporal variations in salinity in the SB using the Chézy-Manning formula of BDC.

Factors controlling denitrification rates of tidal mudflats and fringing salt marshes in south-west England

NASA Astrophysics Data System (ADS)

Koch, M. S.; Maltby, E.; Oliver, G. A.; Bakker, S. A.

1992-05-01

Denitrification rates were determined utilizing the acetylene blockage technique at three sites: upper mudflat, lower mudflat, and Halimione portulacoides marsh on the fringing wetlands of the Torridge River Estuary in South-west England. Denitrification rates were calculated from nitrous oxide (N 2O) production each month for 1 year with intact sediment cores extracted at low tide (0-5 cm). In the lower and upper mudflat sites denitrification rates were low ranging from 0·52 to 5·78 μmol and 1·28 to 4·36 μmol N 2 m -2 h -1, respectively. Denitrification rates in marsh sediments were consistently higher than those of the mudflat ranging from 2·51 to 59·00 μmol N 2 m -2 h -1. Amending river water to sediment cores stimulated lower and upper mudflat denitrification rates approximately 10-fold up to 106·39 and 96·73 μmol N 2 m -2 h -1, respectively. In marsh sediments, a two-fold increase in denitrification was found with river water amended resulting in a maximum rate of 114·80 μmol N 2 m -2 h -1. During the winter months, when riverine NO 3-N levels were at a maximum (2·47 to 2·93 mg l -1), denitrification rates were highest (75·24 to 114·99 μmol N 2 m -2 h -1) and conversely, during the summer both NO 3-N concentrations (1·0 to 1·70 mg l -1) and denitrification (0·95 to 37·38 μmol N 2 m -2 h -1) rates were at a minimum. Mudflat sediment redox potentials (Eh), within the theoretical range of NO 3-1 instability, were limited to the upper 5 mm, thus maximum denitrification rates may be restricted to the sediment surface. When calculating annual denitrification rates in tidal estuaries several factors should be considered including: seasonal NO 3-1 concentrations in tidal water, tidal flooding duration and amplitude, and the depth of the aerobic/anaerobic zone of the sediment.

Quantifying seining detection probability for fishes of Great Plains sand‐bed rivers

USGS Publications Warehouse

Mollenhauer, Robert; Logue, Daniel R.; Brewer, Shannon K.

2018-01-01

Species detection error (i.e., imperfect and variable detection probability) is an essential consideration when investigators map distributions and interpret habitat associations. When fish detection error that is due to highly variable instream environments needs to be addressed, sand‐bed streams of the Great Plains represent a unique challenge. We quantified seining detection probability for diminutive Great Plains fishes across a range of sampling conditions in two sand‐bed rivers in Oklahoma. Imperfect detection resulted in underestimates of species occurrence using naïve estimates, particularly for less common fishes. Seining detection probability also varied among fishes and across sampling conditions. We observed a quadratic relationship between water depth and detection probability, in which the exact nature of the relationship was species‐specific and dependent on water clarity. Similarly, the direction of the relationship between water clarity and detection probability was species‐specific and dependent on differences in water depth. The relationship between water temperature and detection probability was also species dependent, where both the magnitude and direction of the relationship varied among fishes. We showed how ignoring detection error confounded an underlying relationship between species occurrence and water depth. Despite imperfect and heterogeneous detection, our results support that determining species absence can be accomplished with two to six spatially replicated seine hauls per 200‐m reach under average sampling conditions; however, required effort would be higher under certain conditions. Detection probability was low for the Arkansas River Shiner Notropis girardi, which is federally listed as threatened, and more than 10 seine hauls per 200‐m reach would be required to assess presence across sampling conditions. Our model allows scientists to estimate sampling effort to confidently assess species occurrence, which maximizes the use of available resources. Increased implementation of approaches that consider detection error promote ecological advancements and conservation and management decisions that are better informed.

Doktor Johannes Häringshauser - Was seine Bücher über ihn erzählen.

NASA Astrophysics Data System (ADS)

Feola, Vittoria

2009-06-01

Die Bibliothek des Dr. Johannes Häringshauser (1603-1642) weist ihren Besitzer als Arzt und Gelehrten mit großem geistigen Horizont aus. Hervorzuheben ist sein Interesse für Astronomie und Astrologie. Neben Werken, die unmittelbar mit seinen Studien in Wien und Padua und den Erfordernissen eines Arztes in Zusammenhang zu bringen sind (Klassiker der Heilkunde genauso wie aktuelle medizinische Publikationen), wird in seiner Büchersammlung eine reiche Palette an Themen abgedeckt: Theologie, Philosophie, Philologie, Politik, Geschichte und Länderkunde.

Ground-water flow paths and traveltime to three small embayments within the Peconic Estuary, eastern Suffolk County, New York

USGS Publications Warehouse

Schubert, Christopher E.

1999-01-01

The Peconic Estuary, at the eastern end of Long Island, has been plagued by a recurrent algal bloom that has caused the severe decline of local marine resources. Although the onset, duration, and cessation of the bloom remain unpredictable, ground-water discharge has been shown to affect surface-water quality in the western part of the estuary. Results from a study on the North Fork of Long Island indicate that local hydrogeologic factors cause differences in ground-water age and characteristics of discharge to the estuary. The need for information on the local patterns and rates of ground-water discharge to the Peconic Estuary prompted analysis of ground-water flow paths and traveltime to three small embayments within the estuary.Meetinghouse Creek, near the west end of the North Fork; Sag Harbor Cove, in the central part of the South Fork; and West Neck Bay, on Shelter Island.Ground-water-flow models were developed, and particle-tracking procedures were applied to the results of each model, to define the flow paths and traveltime of ground water to the three embayments. The steady-state flow models represent the two-dimensional ground-water-flow system along a vertical section through the uplands of each embayment and simulate long-term hydrologic conditions. The particle-tracking procedure used model-generated ground-water levels and flow rates to calculate the water-particle pathlines and times-of-travel through each flow system from the point of entry (recharge) to the point of exit at streams, the shore, or subsea-discharge areas.Results for the Meetinghouse Creek study area indicate that about 50 percent of the total recharge that enters the system flows southward to Meetinghouse Creek; half of this amount discharges as base flow to the fresh-water reach of the creek, and half as shoreline underflow to the estuarine reach. About 85 percent of the total discharge to Meetinghouse Creek has flowed entirely within the upper glacial aquifer, and about 15 percent has flowed through the Magothy aquifer. The average age of all ground water discharged to Meetinghouse Creek is about 60 years; the average age of base flow to the freshwater reach of the creek is about 7 years, and the average age of shoreline underflow to the estuarine reach is about 120 years. The results for the Sag Harbor Cove study area indicate that about 30 percent of the total recharge that enters the system flows northward to Sag Harbor Cove; about half of this amount discharges as shoreline underflow, and half as subsea underflow. About 40 percent of the total discharge to Sag Harbor Cove has flowed entirely within the upper glacial aquifer, and about 60 percent has flowed through the Pleistocene marine clay unit, Pleistocene(?) sand unit, or Magothy aquifer. The average age of all ground water discharged to Sag Harbor Cove is about 110 years; the average age of shoreline underflow is about 25 years, and the average age of subsea underflow is about 190 years.Results for the West Neck Bay study area indicate that about 65 percent of the total recharge that enters the system flows westward to West Neck Bay; virtually all of this amount discharges as shoreline underflow, but a negligible percentage discharges as subsea underflow. Virtually all discharge to West Neck Bay has flowed entirely within the upper glacial aquifer, although a minor amount has flowed through the Pleistocene marine clay unit. The average age of shoreline underflow to West Neck Bay is about 15 years, and the average age of subsea underflow is about 1,800 years.Ground water that discharges to streams and the shores represented in the models is mostly relatively young water that has flowed entirely within the shallow zones of the flow systems, whereas ground water that discharges to the subsea-discharge areas is mostly old water that has flowed through the deep zones. Data obtained from these models allows evaluation of each embayment.s vulnerability to contaminants introduced at the water table and can guide the development of source-area-protection strategies for the corresponding watersheds.

Thallium isotope composition of the upper continental crust and rivers - An investigation of the continental sources of dissolved marine thallium

USGS Publications Warehouse

Nielsen, S.G.; Rehkamper, M.; Porcelli, D.; Andersson, P.; Halliday, A.N.; Swarzenski, P.W.; Latkoczy, C.; Gunther, D.

2005-01-01

The thallium (Tl) concentrations and isotope compositions of various river and estuarine waters, suspended riverine particulates and loess have been determined. These data are used to evaluate whether weathering reactions are associated with significant Tl isotope fractionation and to estimate the average Tl isotope composition of the upper continental crust as well as the mean Tl concentration and isotope composition of river water. Such parameters provide key constraints on the dissolved Tl fluxes to the oceans from rivers and mineral aerosols. The Tl isotope data for loess and suspended riverine detritus are relatively uniform with a mean of ??205Tl = -2.0 ?? 0.3 (??205Tl represents the deviation of the 205Tl/203Tl isotope ratio of a sample from NIST SRM 997 Tl in parts per 104). For waters from four major and eight smaller rivers, the majority were found to have Tl concentrations between 1 and 7 ng/kg. Most have Tl isotope compositions very similar (within ??1.5 ??205Tl) to that deduced for the upper continental crust, which indicates that no significant Tl isotope fractionation occurs during weathering. Based on these results, it is estimated that rivers have a mean natural Tl concentration and isotope composition of 6 ?? 4 ng/kg and ??205Tl = -2.5 ?? 1.0, respectively. In the Amazon estuary, both additions and losses of Tl were observed, and these correlate with variations in Fe and Mn contents. The changes in Tl concentrations have much lower amplitudes, however, and are not associated with significant Tl isotope effects. In the Kalix estuary, the Tl concentrations and isotope compositions can be explained by two-component mixing between river water and a high-salinity end member that is enriched in Tl relative to seawater. These results indicate that Tl can display variable behavior in estuarine systems but large additions and losses of Tl were not observed in the present study. Copyright ?? 2005 Elsevier Ltd.

Sediment accumulation and mixing in the Penobscot River and estuary, Maine.

PubMed

Yeager, K M; Schwehr, K A; Schindler, K J; Santschi, P H

2018-04-16

Mercury (Hg) was discharged in the late 1960s into the Penobscot River by the Holtra-Chem chlor-alkali production facility, which was in operation from 1967 to 2000. To assess the transport and distribution of total Hg, and recovery of the river and estuary system from Hg pollution, physical and radiochemical data were assembled from sediment cores collected from 58 of 72 coring stations sampled in 2009. These stations were located throughout the lower Penobscot River, and included four principal study regions, the Penobscot River (PBR), Mendall Marsh (MM), the Orland River (OR), and the Penobscot estuary (ES). To provide the geochronology required to evaluate sedimentary total Hg profiles, 58 of 72 sediment cores were dated using the atmospheric radionuclide tracers 137 Cs, 210 Pb, and 239,240 Pu. Sediment cores were assessed for depths of mixing, and for the determination of sediment accumulation rates using both geochemical (total Hg) and radiochemical data. At most stations, evidence for significant vertical mixing, derived from profiles of 7 Be (where possible) and porosity, was restricted to the upper ~1-3cm. Thus, historic profiles of both total Hg and radionuclides were only minimally distorted, allowing a reconstruction of their depositional history. The pulse input tracers 137 Cs and 239,240 Pu used to assess sediment accumulation rates agreed well, while the steady state tracer 210 Pb exhibited weaker agreement, likely due to irregular lateral sediment inputs. Copyright © 2018. Published by Elsevier B.V.

Feeding ecology of Liza ramada (Risso, 1810) (Pisces, Mugilidae) in a south-western estuary of Portugal

NASA Astrophysics Data System (ADS)

Almeida, P. R.

2003-05-01

The feeding activity of the Liza ramada population inhabiting the Mira estuary (Portugal) is reduced during the winter and summer months. At the beginning of the spawning migration (i.e. November) an increase in the amount of food ingested was noticed. In the upper estuary, the feeding behaviour is independent of the tidal cycle, although there is some evidence of a daily rhythm in the food consumption rate, with a reduction during the night. No significant correlation was found between the quantity of particulate organic matter and the concentration of microalgae present in the stomach contents, and it seems that the bulk of the organic matter ingested by the thin-lipped grey mullets comes from a different origin than planktonic or benthic microalgae. The L. ramada population showed a positive selection for sediment particles between 55 and 250 μm in diameter. In general, the diet composition of this species showed a low diversity of food items. A total of 52 food items were identified in the stomach contents, the Bacillariophyceae being the dominant group. The genera Melosira and Ciclotella were the most common and abundant food items, although the genera Navicula, Nitzschia and Surirella were also classified as preferential food items. It was found that the volume of ploughed sediment that resulted from the feeding activity of the thin-lipped grey mullets, and the correspondent disturbed area increased exponentially with the length of the fish.

Evidence for habitat-driven segregation of an estuarine fish assemblage.

PubMed

Loureiro, S N; Reis-Filho, J A; Giarrizzo, T

2016-07-01

This study examined the spatio-temporal variability in fish assemblage structure and composition following monthly sampling (August 2006 to July 2007). Three estuarine zones (upper, middle and lower) of the unvegetated intertidal and subtidal channel habitats located in the Marapanim Estuary were investigated. In each of these zones, salinity, organic matter and sediment types were measured to assess any correlation between habitat types and the fish fauna. A total of 41 496 fishes, belonging to 76 species and 29 families, was recorded. Recurring changes in both species composition and trophic structure were attributed to seasonal variations, while habitat type played a more permanent role in modifying the structure of fish assemblages. Zooplanktivores (e.g. Lycengraulis grossidens) and herbivores (e.g. Cetengraulis edentulus) used the intertidal habitat almost exclusively and were associated with salinity and substratum composition (gravel, silt and mud). In contrast, benthophages (e.g. Cathorops spixii) and benthophage-ichthyophages (e.g. Cynoscion leiarchus) were primarily associated with the subtidal habitat throughout the estuary and were highly related to the presence of sandy substrata. This study highlighted the intricate roles that local factors (such as habitat connectivity) may have on the distribution of fishes at the assemblage level. As such, incorporating habitat sharing or segregation between species should be viewed as essential for any comparisons of estuaries over large geographic scales, and in particular for conservation planning and management measures. © 2016 The Fisheries Society of the British Isles.

Tidal variations of flow convergence, shear, and stratification at the Rio de la Plata estuary turbidity front

NASA Astrophysics Data System (ADS)

FramiñAn, Mariana B.; Valle-Levinson, Arnoldo; Sepúlveda, HéCtor H.; Brown, Otis B.

2008-08-01

Intratidal variability of density and velocity fields is investigated at the turbidity front of the Río de la Plata Estuary, South America. Current velocity and temperature-salinity profiles collected in August 1999 along a repeated transect crossing the front are analyzed. Horizontal and vertical gradients, stability of the front, convergence zones, and transverse flow associated to the frontal boundary are described. Strong horizontal convergence of the across-front velocity and build up of along-front velocity shear were observed at the front. In the proximity of the front, enhanced transverse (or along-front) flow created jet-like structures at the surface and near the bottom flowing in opposite directions. These structures persisted throughout the tidal cycle and were advected upstream (downstream) by the flood (ebb) current through a distance of ˜10 km. During peak flood, the upper layer flow reversed from its predominant downstream direction and upstreamflow occupied the entire water column; outside the peak flood, two-layer estuarine circulation dominated. Changes in density field were observed in response to tidal straining, tidal advection, and wind-induced mixing, but stratification remained throughout the tidal cycle. This work demonstrates the large spatial variability of the velocity field at the turbidity front; it provides evidence of enhanced transverse circulation along the frontal boundary; and reveals the importance of advective and frictional intratidal processes in the dynamics of the central part of the estuary.

Historical perspective of heavy metals contamination (Cd, Cr, Cu, Hg, Pb, Zn) in the Seine River basin (France) following a DPSIR approach (1950-2005).

PubMed

Meybeck, Michel; Lestel, Laurence; Bonté, Philippe; Moilleron, Régis; Colin, Jean Louis; Rousselot, Olivier; Hervé, Daniel; de Pontevès, Claire; Grosbois, Cécile; Thévenot, Daniel R

2007-04-01

The Driver-Pressures-State-Impact-Response approach is applied to heavy metals in the Seine River catchment (65,000 km(2); 14 million people of which 10 million are aggregated within Paris megacity; 30% of French industrial and agricultural production). The contamination pattern at river mouth is established on the particulate material at different time scales: 1930-2000 for floodplain cores, 1980-2003 for suspended particulate matter (SPM) and bed-sediments, 1994-2003 for atmospheric fallout and annual flood deposits. The Seine has been among the most contaminated catchments with maximum contents recorded at 130 mg kg(-1) for Cd, 24 for Hg, 558 for Pb, 1620 for Zn, 347 for Cu, 275 for Cr and 150 for Ni. Today, the average levels for Cd (1.8 mg kg(-1)), Hg (1.08), Pb (108), Zn (370), Cu (99), Cr (123) and Ni (31) are much lower but still in the upper 90% of the global scale distribution (Cr and Ni excepted) and well above the natural background values determined on pre-historical deposits. All metal contents have decreased at least since 1955/65, well before metal emission regulations that started in the mid 1970's and the metal monitoring in the catchment that started in the early 1980's. In the last 20 y, major criteria changes for the management of contaminated particulates (treated urban sludge, agricultural soils, dredged sediments) have occurred. In the mid 1990's, there was a complete shift in the contamination assessment scales, from sediment management and water usage criteria to the good ecological state, now required by the 2000 European Directive. When comparing excess metal outputs, associated to river SPM, to the average metal demand within the catchment from 1950 to 2000, the leakage ratios decrease exponentially from 1950 to 2000 for Cd, Cr, Cu, Pb and Zn, meanwhile, a general increase of the demand is observed: the rate of recycling and/or treatment of metals within the anthroposphere has been improved ten-fold. Hg environmental trajectory is very specific: there is a marked decontamination from 1970 to 2000, but the leakage ratio remains very high (10 to 20%) during this period. Drivers and Pressures are poorly known prior to 1985; State evolution since 1935 has been reconstructed from flood plain cores analysis; Impacts were maximum between 1950 and 1970 but remained unknown due to analytical limitation and lack of awareness. Some Responses are lagging 10 y behind monitoring and have much evolved in the past 10 y.

Seasonal variability of suspended sediment transport in the Seine river catchment area (France)

NASA Astrophysics Data System (ADS)

Franke, Christine; Baati, Selma; Ayrault, Sophie; Bonte, Philippe; Evrard, Olivier; Kissel, Catherine

2010-05-01

This study consists in an innovative application of environmental physico-chemical techniques on fluvial sediments with the aim to trace the seasonal changes in suspended sediment transport of the complex Seine river catchment area in northern France. The aim of this project is to develop a detailed understanding for the discrimination of naturally triggered and anthropogenic induced processes and their temporal changes with weather conditions. With a focus on the heavy metal fraction, we determine the regional distribution of the suspended material and search for environmental fingerprints demonstrating the influence of fluvial transport mechanisms, changes in concentration related to discharge variations or different sediment sources, and in-situ alteration caused by variations in the geochemical conditions (oxy-redox, pH, Eh, etc.). To achieve these goals, we apply a combination of straightforward rock magnetic hysteresis measurements (performed using an AGM2900 at the LSCE) and advanced scanning electron microscopy analyses (SEM). This interdisciplinary approach allows refining the detailed analysis of sediment trap samples, originating from Tessier et al. (2003), as recently shown by Franke et al. (2009). In our preliminary results, we observe a general increase in magnetic concentrations from summer to winter conditions, coupled with a magneto-mineralogic change to rather reduced metallic mineral phases. However, each riversection of the Seine system shows its specific trend line depending on the regional initial input, weathering conditions, drainage area and potential pollution sources. A systematic analysis of the detailed results will allow highlighting the climatic/seasonal influence on the metallic particle assembly. Keywords: Seine river system, environmental magnetism, suspended particulate matter, anthropogenic and natural input, magnetic hysteresis, scanning electron microscopy (SEM),, heavy metal pollution, seasonal variability References: Franke, C., Kissel, C., Robin, E., Bonté, P. and Lagroix, F., 2009, Magnetic particle characterization in the Seine river system: Implications for the determination of natural versus anthropogenic input, Geochem. Geophys. Geosyst., doi:10.1029/2009GC002544. Tessier, L., Bonté, P., Mouchel, J.M., Lefevre, I., Sogon, S., Ayrault, S., Le Cloarec, M.F., 2003, Transport et characterisation des matieres en suspension dans le basin de la Seine : Identification des signatures naturelles et anthropiques, 14èmes Journées Scientifiques de l'Environnement : l'Eau, la Ville, la Vie, Créteil : France 2003. http://hal.archives-ouvertes.fr/docs/00/20/30/84/PDF/4-JSE-2003-Manuscrit-Tessier-HAL-2008-01-08.pdf

A method to assess the evolution and recovery of heavy metal pollution in estuarine sediments: Past history, present situation and future perspectives.

PubMed

Bárcena, Javier F; Claramunt, Inigo; García-Alba, Javier; Pérez, María Luisa; García, Andrés

2017-11-15

A methodology to assess the historical evolution and recovery of heavy metal pollution in estuarine sediments was developed and is presented here. This approach quantifies the distribution of heavy metals in sediment cores, and investigates the influence of anthropogenic activities and/or core locations on the heavy metal pollution, by proposing and using sediment quality indices and polynomial regressions. The method has been applied to the Suances Estuary confirming its suitability as a comprehensive and practical management tool. In this estuary, the evolution of heavy metal pollution (since 1997-1998 to 2015) pointed out the deeper the sediments, the more polluted, indicating a recovery at the upper layers due to the closure and ending of washing discharges from mining, and the reduction of metal loads from industrial wastewaters. In terms of global pollution, the intertidal and subtidal sediments will require 43.1±2.8 and 8.6±0.6years to be unpolluted, respectively. Copyright © 2017 Elsevier Ltd. All rights reserved.

Impact of water overstock on groundwater quality of the Bassee plain area (France)

NASA Astrophysics Data System (ADS)

Gourcy, L.; Pettenati, M.; Baran, N.; Durand, P. Y.

2009-04-01

The project, inspired by the structural flood plain management measures of the Rhine River, consists in the temporal removal of a maximum amount of water from the Seine River in order to leave priority to the water from the River Yonne. Yonne River and the Seine are presenting their maximum water flow usually at a same time. The space located between Bray-sur-Seine and Montereau-Fault-Yonne corresponding to the La Bassée plain (agricultural area of 23 km2) is well adapted to this project of temporary and artificial flood. The objective of the project financed by the Institution Interdépartementale des barrages Réservoirs du Bassin de la Seine (IIBRBS), the BRGM, the Seine-Normandie Water Agency, the European Communauty through the Interreg IIIB SAND project is the evaluation, at a local scale, of the impact on groundwater quality of the temporal Seine water storage. Indeed, the water over storage i) changes hydraulic conditions and therefore modify water and pollutants transfers through the unsaturated and saturated zones and ii) bring at soil surface a water (Seine River) potentially containing contaminants that may move to groundwater and consequently changed physico-chemicals conditions (redox) of groundwater. The estimation of the vulnerability of groundwater to changes and loads needs hydraulic and geochemical modelling of transfer through the unsaturated zone as well as the study of pollutants fate in static conditions. Retention properties of some metals (Pb, Ni, Cu, Cr, Zn) in soils and materials of the unsaturated zone by chemical processes were performed determining adsorption coefficient (Kd) by laboratory experiments. These experiments are showing that nickel mobility is lower in the argillous layers than in the sandy part of the unsaturated zone. Ni mobility is controlled by iron hydroxides and precipitation of other secondary minerals. Its complexation on organic ligands increases its mobility in soils. Copper concentration is influenced by CaCO3 presence and soluble organic ligands. Zinc is strongly adsorbed on the solid matrix at all tested soils. At basic condition, such as normally encountered at the Bassée floodplain, chromium adsorption is very low or null. Based on these results, batch modelling (without transport) were carried out for Cu and Ni. That confirms that nickel adsorption is controlled by iron hydroxides in porous media. For copper, the main processes controlling adsorption is organic ligands complexation that increases the mobility of this element in the soils. To complement the information acquired on metal comportment in the unsaturated zone and because pesticides were detected in soils and groundwater, laboratory experiments were performed using glyphosate alone and combining this pesticide with the tested heavy metals. The tests are highlighting the strong relationships between metals and pesticides. For the 5 soils used glyphosate adsorption is increased when metals are added to the solution. At the opposite, the experiences for the evaluation of the impact of the increase of glyphosate on the quantity of metals adsorbed (Cu, Ni, Ni) were not conclusive. The geochemical calculation code PHREEQC was used to model reactive transfer of solutes in a 1 D saturated column. Results obtained indicate that some contaminants (nickel) are mainly retained at the iron hydroxides surfaces even at very high concentration. Stability of metal depends then on the maintaining of oxic conditions in the porous media. After adsorption, nickel concentrations in soils remains well under average natural concentrations. Results of the project allowed the risk evaluation of a groundwater contamination by the Seine River during overstock episodes. During derivation of the Seine River into the Bassée floodplain, infiltration of water and solutes in the unsaturated zones will be done quickly. Some metals (Zn, Ni, Cu), and the glyphosate, will stay in the first centimetres of the soils due to their intrinsic properties. Even if a change of the physico-chemical conditions (mainly redox, organic matter contents) of the Bassée floodplain has very little probability to occur, this change may lead to very important changes in the comportment of heavy metals and pesticides. Other elements (Cr and other anionic metals) are not retained in the shallow soil horizons and, as water, will infiltrate very quickly in the unsaturated zone during inundation phases. Persistence time, estimated by modelling, of dissolved elements in the unsaturated zone is few years. The results showed that the probability of groundwater contamination due to overstock episodes is very low to null but consequences may be important. This assessment obliges to consider the installation of a water quality monitoring program for the control of the Seine River upstream the alluvial plain about 5 days before filling up the retention basins and up to the end of the replenishment procedure.

Bromine soil/sediment enrichment in tidal salt marshes as a potential indicator of climate changes driven by solar activity: New insights from W coast Portuguese estuaries.

PubMed

Moreno, J; Fatela, F; Leorri, E; Moreno, F; Freitas, M C; Valente, T; Araújo, M F; Gómez-Navarro, J J; Guise, L; Blake, W H

2017-02-15

This paper aims at providing insight about bromine (Br) cycle in four Portuguese estuaries: Minho, Lima (in the NW coast) and Sado, Mira (in the SW coast). The focus is on their tidal marsh environments, quite distinct with regard to key biophysicochemical attributes. Regardless of the primary bromide (Br - ) common natural source, i.e., seawater, the NW marshes present relatively higher surface soil/sediment Br concentrations than the ones from SW coast. This happens in close connection with organic matter (OM) content, and is controlled by their main climatic contexts. Yet, the anthropogenic impact on Br concentrations cannot be discarded. Regarding [Br] spatial patterns across the marshes, the results show a general increase from tidal flat toward high marsh. Maxima [Br] occur in the upper driftline zone, at transition from highest low marsh to high marsh, recognized as a privileged setting for OM accumulation. Based on the discovery of OM ubiquitous bromination in marine and transitional environments, it is assumed that this Br occurs mainly as organobromine. Analysis of two dated sediment cores indicates that, despite having the same age (AD ~1300), the Caminha salt marsh (Minho estuary) evidences higher Br enrichment than the Casa Branca salt marsh (Mira estuary). This is related to a greater Br storage ability, which is linked to OM build-up and rate dynamics under different climate scenarios. Both cores evidence a fairly similar temporal Br enrichment pattern, and may be interpreted in light of the sun-climate coupling. Thereby, most of the well-known Grand Solar Minima during the Little Ice Age appear to have left an imprint on these marshes, supported by higher [Br] in soils/sediments. Besides climate changes driven by solar activity and impacting marsh Br biogeodynamics, those Br enrichment peaks might also reflect inputs of enhanced volcanic activity covarying with Grand Solar Minima. Copyright © 2016 Elsevier B.V. All rights reserved.

Impact of urban effluents on summer hypoxia in the highly turbid Gironde Estuary, applying a 3D model coupling hydrodynamics, sediment transport and biogeochemical processes

NASA Astrophysics Data System (ADS)

Lajaunie-Salla, Katixa; Wild-Allen, Karen; Sottolichio, Aldo; Thouvenin, Bénédicte; Litrico, Xavier; Abril, Gwenaël

2017-10-01

Estuaries are increasingly degraded due to coastal urban development and are prone to hypoxia problems. The macro-tidal Gironde Estuary is characterized by a highly concentrated turbidity maximum zone (TMZ). Field observations show that hypoxia occurs in summer in the TMZ at low river flow and a few days after the spring tide peak. In situ data highlight lower dissolved oxygen (DO) concentrations around the city of Bordeaux, located in the upper estuary. Interactions between multiple factors limit the understanding of the processes controlling the dynamics of hypoxia. A 3D biogeochemical model was developed, coupled with hydrodynamics and a sediment transport model, to assess the contribution of the TMZ and the impact of urban effluents through wastewater treatment plants (WWTPs) and sewage overflows (SOs) on hypoxia. Our model describes the transport of solutes and suspended material and the biogeochemical mechanisms impacting oxygen: primary production, degradation of all organic matter (i.e. including phytoplankton respiration, degradation of river and urban watershed matter), nitrification and gas exchange. The composition and the degradation rates of each variable were characterized by in situ measurements and experimental data from the study area. The DO model was validated against observations in Bordeaux City. The simulated DO concentrations show good agreement with field observations and satisfactorily reproduce the seasonal and neap-spring time scale variations around the city of Bordeaux. Simulations show a spatial and temporal correlation between the formation of summer hypoxia and the location of the TMZ, with minimum DO centered in the vicinity of Bordeaux. To understand the contribution of the urban watershed forcing, different simulations with the presence or absence of urban effluents were compared. Our results show that in summer, a reduction of POC from SO would increase the DO minimum in the vicinity of Bordeaux by 3% of saturation. Omitting discharge from SO and WWTPs, DO would improve by 10% of saturation and mitigate hypoxic events.

Spatio-temporal distribution and sources of Pb identified by stable isotopic ratios in sediments from the Yangtze River Estuary and adjacent areas.

PubMed

Chen, Bin; Liu, Jian; Hu, Limin; Liu, Ming; Wang, Liang; Zhang, Xilin; Fan, Dejiang

2017-02-15

To understand the spatio-temporal distribution and sources of Pb in the sediments of the Yangtze River Estuary and its adjacent areas, 25 surface sediments and 1 sediment core were collected from the study areas. The concentrations of Al and Pb of these sediments exhibit a decreasing trend from the nearshore towards the offshore, with higher concentrations in the coastal areas of the East China Sea (ECS) and southwest of Jeju Island. According to the stable isotopic ratios of Pb, in combination with the elemental ratios and clay mineral data, it is inferred that sedimentary Pb in the surface sediments of the coastal areas of the ECS may come primarily from the Yangtze River, while the Pb southwest of Jeju Island is probably derived from both the Yangtze and Yellow Rivers. The particulate Pb derived from the Yangtze River was possibly dispersed along two paths: the path southward along the coastline of the ECS and the path eastward associated with the Changjiang Diluted Water (CDW), which crosses the shelf of the ECS towards the area southeast of Jeju Island. Although the Yangtze River Basin witnessed rapid economic development during the period from the late 1970s to the middle 1990s, the influence of human activity on Pb concentration remained weak in the Yangtze River Estuary. Since the early 2000s, however, sedimentary Pb has been significantly increasing in the coastal mud areas of the ECS due to the increasing influence of human activity, such as the increase in atmospheric emission of anthropogenic Pb in China, construction of the Three Gorges Dam (TGD), and the construction of smaller dams in the upper reaches of the Yangtze River. Coal combustion and the smelting of non-ferrous metals are possible anthropogenic sources for the sedimentary Pb in the Yangtze River Estuary. Copyright © 2016. Published by Elsevier B.V.

Early Permian transgressive-regressive cycles: Sequence stratigraphic reappraisal of the coal-bearing Barakar Formation, Raniganj Basin, India

NASA Astrophysics Data System (ADS)

Bhattacharya, Biplab; Bhattacharjee, Joyeeta; Bandyopadhyay, Sandip; Banerjee, Sudipto; Adhikari, Kalyan

2018-03-01

The present research is an attempt to assess the Barakar Formation of the Raniganj Gondwana Basin, India, in the frame of fluvio-marine (estuarine) depositional systems using sequence stratigraphic elements. Analysis of predominant facies associations signify deposition in three sub-environments: (i) a river-dominated bay-head delta zone in the inner estuary, with transition from braided fluvial channels (FA-B1) to tide-affected meandering fluvial channels and flood plains (FA-B2) in the basal part of the succession; (ii) a mixed energy central basin zone, which consists of transitional fluvio-tidal channels (FA-B2), tidal flats, associated with tidal channels and bars (FA-B3) in the middle-upper part of the succession; and (iii) a wave-dominated outer estuary (coastal) zone (FA-B4 with FA-B3) in the upper part of the succession. Stacked progradational (P1, P2)-retrogradational (R1, R2) successions attest to one major base level fluctuation, leading to distinct transgressive-regressive (T-R) cycles with development of initial falling stage systems tract (FSST), followed by lowstand systems tract (LST) and successive transgressive systems tracts (TST-1 and TST-2). Shift in the depositional regime from regressive to transgressive estuarine system in the early Permian Barakar Formation is attributed to change in accommodation space caused by mutual interactions of (i) base level fluctuations in response to climatic amelioration and (ii) basinal tectonisms (exhumation/sagging) related to post-glacial isostatic adjustments in the riftogenic Gondwana basins.

["SOS SEIN 84" accelerated breast disease management: Patients satisfaction survey].

PubMed

Arnaud, Antoine; Dumuids, Magali; Mège, Alice; de Rauglaudre, Gaëtan; Regis Arnaud, Anne; Martin, Nicole; Dupuy Meurat, Françoise; Dolle, Sabine; Gallon, Elise; Serin, Daniel

2016-05-01

In case of a new breast symptom or an abnormal result of breast imaging, some women have a problem finding a quick answer to allay their anxiety. The Institut Sainte-Catherine in Avignon has set up a new form of accelerated disease management through the opening of a new dedicated consultation called SOS SEIN 84. We present the result of a prospective quality study of our first new patients. Copyright © 2016 Société Française du Cancer. Published by Elsevier Masson SAS. All rights reserved.

The effects of exposure in sandy beach surf zones on larval fishes.

PubMed

Pattrick, P; Strydom, N A

2014-05-01

The influence of wind and wave exposure on larval fish assemblages within a large bay system was investigated. Larval fishes were sampled from two areas with vastly different exposure to waves and wind, namely the windward and leeward sectors of Algoa Bay. In total, 5702 larval fishes were collected using a modified larval seine. Of these, 4391 were collected in the leeward and 1311 in the windward sector of the bay, representing a total of 23 families and 57 species. Dominant fish families included Clinidae, Engraulidae, Kyphosidae, Mugilidae, Soleidae and Sparidae, similar to the situation elsewhere, highlighting continuity in the composition of larval fish assemblages and the utilization of surf zones by a specific group of larval fishes. Nineteen estuary-associated marine species occurred within the surf zones of Algoa Bay and dominated catches (86·7%) in terms of abundance. Postflexion larvae comprised > 80% of the catch, indicating the importance of the seemingly inhospitable surf zone environment for the early life stages of many fish species. The greatest species diversity was observed within the windward sector of the bay. Distance-based linear modelling identified wave period as the environmental variable explaining the largest proportion of the significant variation in the larval fish assemblage. The physical disturbance generated by breaking waves could create a suitable environment for fish larvae, sheltered from predators and with an abundance of food resources. © 2014 The Fisheries Society of the British Isles.

Developmental toxicity of PAH mixtures in fish early life stages. Part II: adverse effects in Japanese medaka.

PubMed

Le Bihanic, Florane; Clérandeau, Christelle; Le Menach, Karyn; Morin, Bénédicte; Budzinski, Hélène; Cousin, Xavier; Cachot, Jérôme

2014-12-01

In aquatic environments, polycyclic aromatic hydrocarbons (PAHs) mostly occur as complex mixtures, for which risk assessment remains problematic. To better understand the effects of PAH mixture toxicity on fish early life stages, this study compared the developmental toxicity of three PAH complex mixtures. These mixtures were extracted from a PAH-contaminated sediment (Seine estuary, France) and two oils (Arabian Light and Erika). For each fraction, artificial sediment was spiked at three different environmental concentrations roughly equivalent to 0.5, 4, and 10 μg total PAH g(-1) dw. Japanese medaka embryos were incubated on these PAH-spiked sediments throughout their development, right up until hatching. Several endpoints were recorded at different developmental stages, including acute endpoints, morphological abnormalities, larvae locomotion, and genotoxicity (comet and micronucleus assays). The three PAH fractions delayed hatching, induced developmental abnormalities, disrupted larvae swimming activity, and damaged DNA at environmental concentrations. Differences in toxicity levels, likely related to differences in PAH proportions, were highlighted between fractions. The Arabian Light and Erika petrogenic fractions, containing a high proportion of alkylated PAHs and low molecular weight PAHs, were more toxic to Japanese medaka early life stages than the pyrolytic fraction. This was not supported by the toxic equivalency approach, which appeared unsuitable for assessing the toxicity of the three PAH fractions to fish early life stages. This study highlights the potential risks posed by environmental mixtures of alkylated and low molecular weight PAHs to early stages of fish development.

Osmium isotopes demonstrate distal transport of contaminated sediments in Chesapeake Bay

USGS Publications Warehouse

Helz, G.R.; Adelson, J.M.; Miller, C.V.; Cornwell, J.C.; Hill, J.M.; Horan, M.; Walker, R.J.

2000-01-01

Because the isotopic composition of anthropogenic Os is normally distinctive in comparison to continental crust and is precisely measurable, this platinum-group element is attractive as a tracer of transport pathways for contaminated sediments in estuaries. Evidence herein and elsewhere suggest that biomedical research institutions are the chief source of anthropogenic Os. In the Chesapeake Bay region, uncontaminated sediments bear a crustal 187Os/188Os signature of 0.73 ?? 0.10. Slightly higher 187Os/188Os ratios occur in Re-rich Coastal Plain deposits due to post- Miocene 187Re decay. The upper Susquehanna Basin yields sediments also with higher 187Os/188Os. Beginning in the late 1970s, this signal was overprinted by a low 187Os/188Os (anthropogenic) source in the lower Susquehanna Basin. In the vicinity of Baltimore, which is a major center of heavy industry as well as biomedical research, anthropogenic Os has been found only in sediments impacted by the principal wastewater treatment plant. Surprisingly, a mid-Bay site distant from anthropogenic sources contains the strongest anthropogenic Os signal in the data set, having received anthropogenic Os sporadically since the mid-20th Century. Transport of particles to this site overrode the northward flowing bottom currents. Finding anthropogenic Os at this site cautions that other particle-borne substances, including hazardous ones, could be dispersed broadly in this estuary.Because the isotopic composition of anthropogenic Os is normally distinctive in comparison to continental crust and is precisely measurable, this platinum-group element is attractive as a tracer of transport pathways for contaminated sediments in estuaries. Evidence herein and elsewhere suggest that biomedical research institutions are the chief source of anthropogenic Os. In the Chesapeake Bay region, uncontaminated sediments bear a crustal 187Os/188Os signature of 0.73 ?? 0.10. Slightly higher 187Os/188Os ratios occur in Re-rich Coastal Plain deposits due to post-Miocene 187Re decay. The upper Susquehanna Basin yields sediments also with higher 187Os/188Os. Beginning in the late 1970s, this signal was overprinted by a low 187Os/188Os (anthropogenic) source in the lower Susquehanna Basin. In the vicinity of Baltimore, which is a major center of heavy industry as well as biomedical research, anthropogenic Os has been found only in sediments impacted by the principal wastewater treatment plant. Surprisingly, a mid-Bay site distant from anthropogenic sources contains the strongest anthropogenic Os signal in the data set, having received anthropogenic Os sporadically since the mid-20th Century. Transport of particles to this site overrode the northward flowing bottom currents. Finding anthropogenic Os at this site cautions that other particle-borne substances, including hazardous ones, could be dispersed broadly in this estuary.

Distribution and relative abundance of fishes in littoral areas of Chief Joseph Reservoir, Columbia River

USGS Publications Warehouse

Gadomski, Dena M.; Venditti, David A.; Robinson, T. Craig; Beeman, John W.; Maule, Alec G.

2004-01-01

We surveyed fish assemblages in littoral areas of Chief Joseph Reservoir of the upper Columbia River to aid in understanding this ecosystem. Fish distributions and abundances were examined during April-July 1999 in relation to environmental conditions in the reservoir. We also compared the fish assemblages in Chief Joseph reservoir in 1999 to a past study conducted during 1974-1975, and to assemblages in other areas of the Columbia River. During 67 hr of electrofishing and 78 beach seine hauls in Chief Joseph Reservoir, 7460 fishes representing 8 families were collected. The majority of the catch was native – northern pikeminnow; redside shiners; longnose, bridgelip, and largescale suckers; and sculpins. The most abundant introduced species was walleye, and one species, rainbow trout, was mostly of net-pen origin. Larger sizes of suckers and northern pikeminnow were most abundant in the upper reservoir, likely due to upstream spawning migrations. The lower reservoir contained greater abundances of smaller fishes, and this area had lower flows, smaller substrates, and more complex shorelines that offered these fishes refugia. Only adult suckers displayed significant differences in abundances related to substrate. The relative abundances of species appeared to have changed since the 1970s, when the dominant fishes were northern pikeminnow, peamouth, largescale suckers, and walleye. Fish assemblage differences between Chief Joseph Reservoir and lower Columbia River reservoirs were also evident due to the morphology of the reservoir, its more northerly location, and the lack of fish passage facilities at Chief Joseph Dam. Our study is one of the few descriptions of fishes in the upper Columbia Rivers.

Distribution of heavy metals and environmental assessment of surface sediment of typical estuaries in eastern China.

PubMed

Bi, Shipu; Yang, Yuan; Xu, Chengfen; Zhang, Yong; Zhang, Xiaobo; Zhang, Xianrong

2017-08-15

Estuary sediment is a major pollutant enrichment medium and is an important biological habitat. This sediment has attracted the attention of the marine environmental scientists because it is a more stable and effective medium than water for monitoring regional environmental quality conditions and trends. Based on a large amount of measurement data, we analyzed the concentrations, distribution, and sources of seven heavy metals (As, Cd, Cr, Cu, Hg, Pb, and Zn) in the surface sediment of typical estuaries that empty into the sea in eastern China: the Liaohe River Estuary, Yellow River Estuary, Yangtze River Estuary, Minjiang River Estuary, and Pearl River Estuary. The heavy metal concentrations in the sediments vary considerably from one estuary to the next. The Liaohe River Estuary sediment contains elevated levels of Cd, Hg, and Zn. The Yellow River Estuary sediment contains elevated levels of As. The sediments in the Yangtze River and Minjiang River estuaries contain elevated levels of Cd and Cu and of Pb and Zn, respectively. The sediment in the Pearl River Estuary contains elevated levels of all seven heavy metals. We used the Nemerow index method to assess the environment quality. The heavy metal pollution in the Liaohe River and Pearl River estuaries is more severe than that in the other estuaries. Additional work indicates that the heavy metal pollution in the Liaohe River and Pearl River estuaries is caused mainly by human activity. Copyright © 2017. Published by Elsevier Ltd.

The Río de la Plata estuary response to wind variability in synoptic time scale: Salinity fields and salt wedge structure

NASA Astrophysics Data System (ADS)

Meccia, V. L.; Simionato, C. G.; Guerrero, R. A.

2009-04-01

The Río de la Plata estuary is located in the eastern coast of southern South America, approximately at 35° S. It has a northwest to southeast oriented funnel shape approximately 300 km long that narrows from 220 km at its mouth to 40 km at its upper end. With a mean discharge of 25,000 m3 s-1 and a drainage area of 3.5 × 106 km2 it ranks fourth and fifth worldwide in freshwater discharge and drainage area, respectively. The interaction between estuarine and shelf waters originates an intense and active salinity front which plays an important role in the flow dynamics and the distribution of properties on the shelf. As a result of the constant displacement of the surface front and the steadiness of the bottom front whose location is controlled by the bathymetry, a time-variable salt wedge structure is observed in the estuary during most of the year. In this work, Estuary, Coastal and Ocean Model (ECOM) was applied to study the processes associated to the salinity fields and the salt wedge structure in the Río de la Plata estuary. It was found that salinity fields in the Río de la Plata rapidly respond -order of 3 days- to wind variability. Therefore, the traditional conceptual scheme that considers seasonal variability as the main feature of the salinity field in this estuary does not longer hold and conditions classically though as characteristic of ‘winter' or ‘summer' can take place during any season with high variability. The estuary response to wind variability can be explained in terms of four characteristic patterns associated to winds that blow with dominant components perpendicular and parallel to the estuary axis. Northeasterly winds produce a southwestward retraction of the surface salinity front. The results are consistent with upwelling motion along the Uruguayan coast under this wind direction. Southwesterly winds produce a northward displacement of the surface salinity front towards the Uruguayan coast and, according to our simulations, a downwelling motion in that region. In both cases, upwelling or downwelling result of the perpendicular to the coast Ekman transport in that region. Northwesterly winds produce net outflow of surface continental waters and inflow of bottom shelf waters resulting in an intensification of the vertical stratification along the salinity front. Finally, southeasterly winds produce a net inflow of surface continental waters and outflow of bottom shelf waters and, therefore, a weakening of the stratification along the salinity front. Salinity data available in the estuary have the limitations of their low spatial and temporal resolution, which limit the possibility of extracting the same patters found in the numerical simulations. Nevertheless an attempt to validate the former conclusions from historic CTD observations was done with successful results. A similar response to upstream/downstream winds has been observed in other estuaries. But, the enormous breadth of the Río de la Plata allows for the occurrence of another wind-forced mode of circulation related to cross-river winds in which lateral currents dominate. In fact, in what concerns circulation, the Río de la Plata behaves more as a semienclosed basin than as a typical estuary. Wind conditions necessary to break down the salt wedge structure and the persistence of the signal after a disruptive event were also studied. Stratification is completely destroyed by strong -approximately 13 m s-1- or persistent -around 3 days for 10 m s-1 intensity- southeasterly winds. Nevertheless this kind of events is not frequent in the region. Moreover, stratification completely recovers in a relatively short period of time -between 10 and 15 days- after the strong wind relaxation. Consequently, even though the salt wedge structure is a consequence of the large discharge and the bathymetry, its existence is favored by prevailing winds. Results presented in this work have important implications in biology. The strong picnocline of the Río de la Plata estuary is connected to plankton retention and accumulation, including eggs of certain species that spawn and nurse in the estuary. This way, retentive properties of the system can be altered during a disruptive event exposing larvae to abrupt changes in salinity conditions. Nevertheless, these events can occur few times along the year and besides the system can relatively quickly reconstruct the vertical halocline. As a result the salt wedge structure is presented along most part of the year. This implies that significant mixing events producing exchanges of water, sediments, nutrients and other properties between the estuary and the open ocean are limited to occur only under strong or persistent southeasterly winds. The Río de la Plata estuary would show strong retentive features favoring biota to retain eggs and larvae, but also favoring pollutant accumulation.

Dissolved oxygen in two Oregon estuaries: Importance of the ocean-estuary connection

EPA Science Inventory

We examined the role of the ocean –estuary connection in influencing periodic reductions in dissolved oxygen (DO) levels in Yaquina and Yachats estuaries, Oregon, USA. In the Yaquina Estuary, there is close coupling between the coastal ocean and the estuary. As a result, low DO ...

Dissolved oxygen in two Oregon estuaries: The importance of the ocean-estuary connection

EPA Science Inventory

We examined the role of the ocean –estuary connection in influencing periodic reductions in dissolved oxygen (DO) levels in Yaquina and Yachats estuaries, Oregon, USA. In the Yaquina Estuary, there is close coupling between the coastal ocean and the estuary. As a result, low DO ...

75 FR 34975 - Notice of Estuary Habitat Restoration Council's Intent to Revise its Estuary Habitat Restoration...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-06-21

... Estuary Habitat Restoration Council's Intent to Revise its Estuary Habitat Restoration Strategy; Request... interagency Estuary Habitat Restoration Council, is providing notice of the Council's intent to revise the ''Estuary Habitat Restoration Strategy'' and requesting public comments to guide its revision. DATES...

Variations in trace element geochemistry in the Seine River Basin based on floodplain deposits and bed sediments

USGS Publications Warehouse

Horowitz, A.J.; Meybeck, Michel; Idlafkih, Z.; Biger, E.

1999-01-01

Between 1990 and 1995 a series of bed sediment, suspended sediment and fresh floodplain samples were collected within the Seine River Basin, in France, to evaluate variations in trace element geochemistry. Average background trace element levels for the basin were determined from the collection and subsequent analyses of bed sediment samples from small rural watersheds and from a prehistoric (5000 BP) site in Paris. Concentrations are relatively low, and similar to those observed for fine-grained bed sediments from unaffected areas in the United States and Canada. However, the concentrations are somewhat higher than the reference levels presently adopted by French water authorities for areas north of the Seine Basin, which have similar bedrock lithologies. Downstream trace element variations were monitored in 1994 and 1995 using fresh surficial floodplain samples that were collected either as dried deposits a few days after peak discharge, or immediately after peak discharge (under ??? 30 cm of water). Chemical comparisons between fresh floodplain deposits, and actual suspended sediments collected during flood events, indicate that, with some caveats, the former can be used as surrogates for the latter. The floodplain sediment chemical data indicate that within the Seine Basin, from the relatively unaffected headwaters through heavily affected urban streams, trace element concentrations vary by as much as three orders of magnitude. These trace element changes appear to be the result of both increases in population as well as concomitant increases in industrial activity. This article is a US government work and is in the public domain in the United States.

Lateral trends and vertical sequences in estuarine sediments, Willapa Bay, Washington

USGS Publications Warehouse

Clifton, H. Edward; Phillips, L.

1980-01-01

Willapa Bay is a sizable estuary on the southern coast of Washington- Relatively unmodified in a geologic sense by human activity the bay provides an excellent example of modern depositional facies in an estuarine setting. Studies of these deposits indicate that consistent lateral trends exist in sediment texture and sedimentary structures. The texture changes from sandy at the mouth of the bay to muddy in its upper parts. In any part of the bay , sediment is coarsest in the channel bottoms, where lag deposits accumulate. The sediment tends to fine in an upslope direction and is finest in supratidal flat deposits of silt and clay. The nature of sedimentary structures depends on the combination of physical and biological processes and sediment textures. Bedforms exist wherever the bed is sandy. In the main tidal channels sandwaves and dunes up to 4 meters high occur. In tributary channels and at the margins of the main channel, at shallower depths and under less intense currents , the structures are generally less than a meter high. Current ripples occur in t he sandy bed of all of the tidal channels and in runoff channels cross the tidal flat. Symmetric long-crested ripples are produced by wave action over the sandy intertidal flat. Internal structures in the bay's sediment depend not only on the nature of the bedform but also on the rate of bioturbation relative to physical processes. Under fields of large sandwaves or dunes, medium- to large-scale tabular and trough crossbedding predominates. This crossbedding generally is unidirectional, reflecting the locally dominant current (ebb or flood). Ripple bedding predominates elsewhere in sandy sediment within the channels. Where sand transport is diminished, as on the floor of the upper tributary channels, bioturbation exceeds the rate of production of physical structures and bedding is destroyed. The depositional banks in such areas tend to be sites of rapid sediment accumulation and bedding in the form of interlayered sand (commonly ripple bedded) and mud persists. On intertidal flats the sediment accumulates slowly and bioturbation erases nearly all physical structures. Bedding is preserved only where deposition is locally rapid , as in topographic depressions or on the depositional banks of runoff channels, or where faunal activity is inhibited, as beneath mounds of blue-green algae. The rate of sedimentation is slower still on the supratidal flats, but the general paucity of faunal activity allows the preservation of thin alternations of fine sand , silt or clay. The lateral migration of the tidal channels produces vertical sequences in which topographically higher facies are superposed on one another. Near the mouth of the estuary the upward sequence: lag deposit — crossbedded sand — ripple or planar-bedded sand is typical. The crossbedding shows a general upward decrease in thickness and a progression from trough to tabular units. In the main tidal channel - in the central estuary and in sandy tributary channels, the typical vertical sequence resembles that near the mouth , with the exception that the sequence is capped by bioturbated sandy or muddy tide flat deposits. In the upper estuary , where muddy sediment predominates, a typical sequence shows the progression-. bioturbated lag deposit — gently dipping interlaminated sand and mud layers of the accretionary bank — bioturbated mud flat deposits — thinly laminated fine supratidal deposits.

Earth observations taken during the STS-41D mission

NASA Image and Video Library

2009-06-25

41D-34-099 (30 Aug-5 Sept 1984) --- The Gambia River, from Georgetown in the upper right corner of the photograph downstream to Mansa Konko, where it becomes an estuary about 60 miles above Banjul, the capital of The Gambia. The river is heavily silted from rain originating in the highlands of Guinea. This accounts for its bronze color as it passes from forest to drier savannah en route to the Sahara and across the nation of Senegal in west Africa. The Gambia itself is a long, narrow nation which follows the river for about 200 miles.

Organic carbon balance and net ecosystem metabolism in Chesapeake Bay

USGS Publications Warehouse

Kemp, W.M.; Smith, E.M.; Marvin-DiPasquale, M.; Boynton, W.R.

1997-01-01

The major fluxes of organic carbon associated with physical transport and biological metabolism were compiled, analyzed and compared for the mainstem portion of Chesapeake Bay (USA). In addition, 5 independent methods were used to calculate the annual mean net ecosystem metabolism (NEM = production - respiration) for the integrated Bay. These methods, which employed biogeochemical models, nutrient mass-balances anti summation of individual organic carbon fluxes, yielded remarkably similar estimates, with a mean NEM of +50 g C m-2 yr-1 (?? SE = 751, which is approximately 8% of the estimated annual average gross primary production. These calculations suggest a strong cross-sectional pattern in NEM throughout the Bay, wherein net heterotrophic metabolism prevails in the pelagic zones of the main channel, while net autotrophy occurs in the littoral zones which flank the deeper central area. For computational purposes, the estuary was separated into 3 regions along the land-sea gradient: (1) the oligohaline Upper Bay (11% of total area); (2) the mesohaline Mid Bay (36% of area); and (3) the polyhaline Lower Bay (53% of area). A distinct regional trend in NEM was observed along this salinity gradient, with net here(atrophy (NEM = 87 g C m-2 yr-1) in the Upper Bay, balanced metabolism in the Mid Bay and net autotrophy (NEM = +92 g C m-2 yr-1) in the Lower Bay. As a consequence of overall net autotrophy, the ratio of dissolved inorganic nitrogen (DIN) to total organic nitrogen (TON) changed from DIN:TON = 5.1 for riverine inputs to DIN:TON = 0.04 for water exported to the ocean. A striking feature of this organic C mass-balance was the relative dominance of biologically mediated metabolic fluxes compared to physical transport fluxes. The overall ratio of physical TOC inputs (1) to biotic primary production (P) was 0.08 for the whole estuary, but varied dramatically from 2.3 in the Upper Bay to 0.03 in the Mid and Lower Bay regions. Similarly, ecosystem respiration was some 6-fold higher than the sum of all physical carbon sinks. This general negative correspondence between I:P ratio and NEM, which occurred among Bay regions, was also evident in data available for organic C fluxes in other coastal ecosystems. An inverse relationship between NEM and P, postulated in a previous study, did not apply to Chesapeake Bay, and closer examination of available data revealed the importance of the loading ratio of DIN:TOC as a key control on coastal NEM. It is proposed here that the general global trend of coastal eutrophication will lead to increasing values of NEM in estuaries worldwide. The management implications of this trend are complex, involving both increased potential fisheries harvest and decreased demersal habitat.

Financial comparisons of fishing gear used in Kenya's coral reef lagoons.

PubMed

Mangi, Stephen C; Roberts, Callum M; Rodwell, Lynda D

2007-12-01

The cost of fishing and the income earned by fishers using small and large traps, gill nets, beach seines, hand lines, and spearguns were assessed in the multigear fishery of southern Kenya to establish a financial rationale for fishing gear use. Direct observations and key-informant interviews with fish leaders and boat captains were used to gather data on fish catch, cost of fishing gear, boats, and the price of fish. Among the fishing gear used, spearguns had the lowest monthly cost (USD 1 mo(-1)) while big traps had the highest (USD 13 mo(-1)). Income was highest among capital cost beach seine fishers (USD 183 mo(-1)) and lowest among noncapital cost beach seine fishers (USD 20 mo(-1)). There was a direct positive correlation between income earned and profitability of gear. Correlation of the financial measure for each gear to four categories of damage to fish and habitats showed that low cost fishing gear were associated with the highest environmental damage indicating a trade-off between cost of gear and environmental health.

Lake Sturgeon, Acipenser fulvescens, movements in Rainy Lake, Minnesota and Ontario

USGS Publications Warehouse

Adams, W.E.; Kallemeyn, L.W.; Willis, D.W.

2006-01-01

Rainy Lake, Minnesota-Ontario, contains a native population of Lake Sturgeon (Acipenser fulvescens) that has gone largely unstudied. The objective of this descriptive study was to summarize generalized Lake Sturgeon movement patterns through the use of biotelemetry. Telemetry data reinforced the high utilization of the Squirrel Falls geographic location by Lake Sturgeon, with 37% of the re-locations occurring in that area. Other spring aggregations occurred in areas associated with Kettle Falls, the Pipestone River, and the Rat River, which could indicate spawning activity. Movement of Lake Sturgeon between the Seine River and the South Arm of Rainy Lake indicates the likelihood of one integrated population on the east end of the South Arm. The lack of re-locations in the Seine River during the months of September and October may have been due to Lake Sturgeon moving into deeper water areas of the Seine River and out of the range of radio telemetry gear or simply moving back into the South Arm. Due to the movements between Minnesota and Ontario, coordination of management efforts among provincial, state, and federal agencies will be important.

Dissolved oxygen in two Oregon estuaries: Importance of the ocean-estuary connection - March 2011

EPA Science Inventory

We examined the role of the ocean–estuary connection in influencing periodic reductions in dissolved oxygen (DO) levels in Yaquina and Yachats estuaries, Oregon, USA. In the Yaquina Estuary, there is close coupling between the coastal ocean and the estuary. As a result, low DO w...

Dissolved oxygen in two Oregon estuaries: The importance of the ocean-estuary connection - May 16, 2011

EPA Science Inventory

We examined the role of the ocean –estuary connection in influencing periodic reductions in dissolved oxygen (DO) levels in Yaquina and Yachats estuaries, Oregon, USA. In the Yaquina Estuary, there is close coupling between the coastal ocean and the estuary. As a result, low DO ...

A comparison of CO2 dynamics and air-water fluxes in a river-dominated estuary and a mangrove-dominated marine estuary

NASA Astrophysics Data System (ADS)

Akhand, Anirban; Chanda, Abhra; Manna, Sudip; Das, Sourav; Hazra, Sugata; Roy, Rajdeep; Choudhury, S. B.; Rao, K. H.; Dadhwal, V. K.; Chakraborty, Kunal; Mostofa, K. M. G.; Tokoro, T.; Kuwae, Tomohiro; Wanninkhof, Rik

2016-11-01

The fugacity of CO2 (fCO2 (water)) and air-water CO2 flux were compared between a river-dominated anthropogenically disturbed open estuary, the Hugli, and a comparatively pristine mangrove-dominated semiclosed marine estuary, the Matla, on the east coast of India. Annual mean salinity of the Hugli Estuary (≈7.1) was much less compared to the Matla Estuary (≈20.0). All the stations of the Hugli Estuary were highly supersaturated with CO2 (annual mean 2200 µatm), whereas the Matla was marginally oversaturated (annual mean 530 µatm). During the postmonsoon season, the outer station of the Matla Estuary was under saturated with respect to CO2 and acted as a sink. The annual mean CO2 emission from the Hugli Estuary (32.4 mol C m-2 yr-1) was 14 times higher than the Matla Estuary (2.3 mol C m-2 yr-1). CO2 efflux rate from the Hugli Estuary has increased drastically in the last decade, which is attributed to increased runoff from the river-dominated estuary.

Inter-annual differences of ichthyofauna structure of the Guadiana estuary and adjacent coastal area (SE Portugal/SW Spain): Before and after Alqueva dam construction

NASA Astrophysics Data System (ADS)

Chícharo, M. Alexandra; Chícharo, Luis; Morais, Pedro

2006-10-01

The objective of this study was to evaluate how inter-annual changes in the volume of freshwater input and water parameters (salinity, temperature, major dissolved nutrients, seston and chlorophyll a) affect fish assemblages in the Guadiana estuary (South Portugal). During the sampling period (two distinct hydrological years), 56 fish species were identified. Anchovies ( Engraulis encrasicolus) and barbells ( Barbus species) dominated the abundances in the high inflow year (2001), but Pomatoschistus species were the most important taxa in the low inflow year (2002). Barbells and Portuguese toadfish ( Halobatrachus didactylus) dominated the biomass in both years under different inflow conditions, but a reduction in barbells' biomass occurred during the low inflow year. Multivariate analysis indicated a persistent spatial structuring of the estuarine community for both years and in different seasonal periods. Changes in salinity and seston, which were mainly due to changes in freshwater input, had an important influence on the structure of the fish assemblages. In 2002, the increased salinity in the upper estuary allowed colonization by marine species of an area that usually contains freshwater, decreasing even more the habitat for indigenous freshwater species in the downstream area of the Guadiana River. There was also a decrease in the abundances of planktivorous and omnivorous fishes and an increase in carnivorous fishes during the low inflow year. As fishes in these systems are important regulators of processes in the trophic web, changes in the dominant feeding groups can have consequences on water quality, particularly in relation to the occurrence of plankton blooms.

Rare earth element analysis indicates micropollutants in an urban estuary

NASA Astrophysics Data System (ADS)

Mohajerin, T. J.; Johannesson, K. H.; Kolker, A.; Burdige, D. J.; Chevis, D.

2011-12-01

Rare earth element analysis of Bayou Bienvenue waters shows anomalously high gadolinium, Gd, concentrations relative to its nearest neighbors in the REE series, europium and terbium. The anomalously high Gd concentrations indicate anthropogenic input from waste-water treatment plants in the area as anthropogenic Gd input can be traced back to its use as a contrast agent in magnetic resonance imaging in hospitals. Others have shown that anomalously high levels of Gd in natural waters are likely to be associated with other micropollutants that also occur in hospital effluent and that are not removed in the wastewater treatment process, including pharmaceuticals in the form of steroids, antihistamines, and antibiotics. Estuaries serve as many important ecological roles and have been shown to act as a filter for pollutants. To better understand the transport, biogeochemical cycling, and ultimate fate of trace elements in estuaries, I collected surface water samples from Bayou Bienvenue, a wetland triangle that covers an area of 427 acres directly adjacent to New Orleans, Louisiana. Water samples from Bayou Bienvenue were collected along the salinity gradient and subsequently filtered through progressively smaller pore-size filters. The resulting fractions were analyzed for trace element concentions, including the REEs, by magnetic sector ICP-MS. The attached figure shows the Gd anomaly present in the particulate (>0.45μm) fraction. Upper continental crust (UCC)-normalized plots of colloidal REEs (0.02μm - 0.45μm) fraction is lacking this anomaly indicating anthropogenic Gd is found chiefly in the particulate fraction in Bayou Bienvenue. No clear relationship between Gd concentration and salinity was apparent.

Investigation into the response of the auditory and acoustic communications systems in the Beluga whale (Delphinapterus leucas) of the St. Lawrence River Estuary to noise, using vocal classification

NASA Astrophysics Data System (ADS)

Scheifele, Peter Martin

2003-06-01

Noise pollution has only recently become recognized as a potential danger to marine mammals in general, and to the Beluga Whale (Delphinapterus leucas) in particular. These small gregarious Odontocetes make extensive use of sound for social communication and pod cohesion. The St. Lawrence River Estuary is habitat to a small, critically endangered population of about 700 Beluga whales who congregate in four different sites in its upper estuary. The population is believed to be threatened by the stress of high-intensity, low frequency noise. One way to determine whether noise is having an effect on an animal's auditory ability might be to observe a natural and repeatable response of the auditory and vocal systems to varying noise levels. This can be accomplished by observing changes in animal vocalizations in response to auditory feedback. A response such as this observed in humans and some animals is known as the Lombard Vocal Response, which represents a reaction of the auditory system directly manifested by changes in vocalization level. In this research this population of Beluga Whales was tested to determine whether a vocalization-as-a-function-of-noise phenomenon existed by using Hidden Markhov "classified" vocalizations as targets for acoustical analyses. Correlation and regression analyses indicated that the phenomenon does exist and results of a human subjects experiment along with results from other animal species known to exhibit the response strongly implicate the Lombard Vocal Response in the Beluga.

Estuarine environments as rearing habitats for juvenile Coho Salmon in contrasting south-central Alaska watersheds

USGS Publications Warehouse

Hoem Neher, Tammy D.; Rosenberger, Amanda E.; Zimmerman, Christian E.; Walker, Coowe M.; Baird, Steven J.

2013-01-01

For Pacific salmon, estuaries are typically considered transitional staging areas between freshwater and marine environments, but their potential as rearing habitat has only recently been recognized. The objectives of this study were two-fold: (1) to determine if Coho Salmon Oncorhynchus kisutch were rearing in estuarine habitats, and (2) to characterize and compare the body length, age, condition, and duration and timing of estuarine occupancy of juvenile Coho Salmon between the two contrasting estuaries. We examined use of estuary habitats with analysis of microchemistry and microstructure of sagittal otoliths in two watersheds of south-central Alaska. Juvenile Coho Salmon were classified as estuary residents or nonresidents (recent estuary immigrants) based on otolith Sr : Ca ratios and counts of daily growth increments on otoliths. The estuaries differed in water source (glacial versus snowmelt hydrographs) and in relative estuarine and watershed area. Juvenile Coho Salmon with evidence of estuary rearing were greater in body length and condition than individuals lacking evidence of estuarine rearing. Coho Salmon captured in the glacial estuary had greater variability in body length and condition, and younger age-classes predominated the catch compared with the nearby snowmelt-fed, smaller estuary. Estuary-rearing fish in the glacial estuary arrived later and remained longer (39 versus 24 d of summer growth) during the summer than did fish using the snowmelt estuary. Finally, we observed definitive patterns of overwintering in estuarine and near shore environments in both estuaries. Evidence of estuary rearing and overwintering with differences in fish traits among contrasting estuary types refute the notion that estuaries function as only staging or transitional habitats in the early life history of Coho Salmon.

Presentation of the FMI 5000 Project: Environmental changes: Fluvio-marine interactions over the last 5000yrs

NASA Astrophysics Data System (ADS)

Ramos-Pereira, Ana; Ramos, Catarina; Trindade, Jorge; Araújo-Gomes, João.; Rocha, Jorge; Granja, Helena; Gonçalves, Luís.; Monge-Soares, António; Martins, José

2010-05-01

Keywords: Estuaries, Environmental Changes, Holocene, GIS Modelling, Portugal FMI 5000 Project (between 2010 and 2012) aims to evaluate, in different estuarine environmental conditions, the balance between fluvial and marine influences, the responses to climatic events and the impact of land use changes. The temporal window chosen, contains different trends of the sea level, climatic fluctuations like the Bond events or humid episodes recorded in the Iberian Peninsula, as well as the increase of the human intervention in the landscape, particularly sensitive since the Bronze Age (circa 3500yr), imprinted in the filling-up of the alluvial plain estuaries. The Portuguese mainland mesotidal coast spreads out in two different environmental conditions: (i) the West coast exposed to the NW dominant waves, with a temperate oceanic climate and fluvial regimes and (ii) the Southern sheltered one, but open to the SW storms, with a Mediterranean climate and with occasional heavy fluvial discharges. This contrast along the coast creates a good field of research to achieve the aims of the project. To prosecute this goal, estuaries of medium drainage basins were selected as they have homogeneous climate, geologic and geomorphologic conditions, allowing to define accurately the hydroclimatic events that contribute to the infilling of the estuarine plains. The small changes are recorded not only in the textural properties of the sediments, already recognized in the sediments of the Tagus and Guadiana rivers and in the small estuaries of the Spanish southern coast but also in the micro fauna, pollens and non-pollen-palinomorphs allowing to define the environmental changes, both marine and fluvial. To achieve the Project goals we select three estuaries in different climatic and wave climate conditions, to develop four different kinds of research and methodologies: (i) To identify millenary evolution, several hand-operated gauge auger cores or vibracores will be carried out in the infilling sediments of the estuaries alluvial plains. The cored sediments will be treated to define the textural sedimentary changes, to identify the pollen and non-pollen-palinomorphs and the foraminifera content. The changes in the sedimentary record are fundamental in the flood episodes evaluation and the sequence of wet and dry period's establishment over the Middle and Upper Holocene. The identification of the pollen and non-pollen-palinomorphs will add information on the natural and human induced climatic and environmental conditions. The presence and the type of foraminifera content will set aside the marine incursion episodes and the environmental changes. Stable isotope ratios (δ13C) in muddy deposits will be used to identify sources of fine-sized organic matter (marine or terrestrial). (ii) To identify the secular evolution, the research of regional historical documents will focus not only on rainy/flooded episodes and droughts but also on the land use changes (e.g. deforestation, drying of marshes). (iii) To assess dating of the detected environmental change events, the sedimentation rates and the landscape evolution over the last 5000 yr, radiocarbon dating will be carried out. For the last century another approach will be used, based on radiometric data tools adequate to this temporal scale (210Pb) and compared with climatic and hydrological Portuguese network observational records. (iv) The correlation of the results provided by the three previous set of tasks would be performed and compared with Paleoclimatic Data Sets (e.g. NOAA) in order to evaluate how the global and regional climatic changes are reflected along the Western coast of the Iberian Peninsula during the last 5000yr. All data will be integrated in a GIS, allowing the reconstruction and modelling of paleolandscape, its evolution during the Middle and Upper Holocene and future tendencies in the global change scenario. Project financed by FCT - Fundação para a Ciência e Tcnologia, n°: PTDC/CTE-GIX/104035/2008

Movements and demography of spawning American Shad in the Penobscot River, Maine, prior to dam removal

USGS Publications Warehouse

Grote, Ann B.; Bailey, Michael M.; Zydlewski, Joseph D.

2014-01-01

We conducted a baseline study to better understand the migratory movements and age and spawning histories of American Shad Alosa sapidissima in the Penobscot River, Maine. The Penobscot River is currently undergoing a major dam removal project that is focused on restoring migratory connectivity and recovering diadromous fish populations including American Shad. This study addresses key data gaps for a previously unstudied native population of shad prior to restoration. A combination of radio- (n = 70) and acoustic telemetry (n = 14) was used to investigate the movements of migratory adult fish in 2010 and 2011. Scale-based analyses were used to assess spawner age and iteroparity. Radiotelemetry results indicated that few tagged fish (5–8%) approached the head-of-tide dam. Tagged fish exhibited three general patterns of movement in the accessible freshwater river habitat: use of the upper river reach, the lower river reach, or both. Mean freshwater residence time ranged from 9.1 to 14.0 d. Congregating fish were observed at two sites in the upper river reach and spawning activity was observed. Freshwater survival and survival to the estuary were at least 71%. This observed high survival was consistent with the estimated age and spawning histories of tracked fish, which indicated that 75–95% of the sampled fish were repeat spawners. Estimated age of adult migrants ranged from age 4 to age 9. Postspawning acoustic-tagged American Shad exhibited a series of prolonged upstream and downstream reversals upon entering the lower estuary. These movements have been previously unreported, and suggest that estuarine residency after spawning is important to osmoregulatory acclimatization for re-entry into salt water and the resumption of postspawning feeding activity.

Distribution and Dynamic Habitat Use of Young Bull Sharks Carcharhinus leucas in a Highly Stratified Northern Gulf of Mexico Estuary

PubMed Central

Drymon, J. Marcus; Ajemian, Matthew J.; Powers, Sean P.

2014-01-01

Understanding how animals alter habitat use in response to changing abiotic conditions is important for effective conservation management. For bull sharks (Carcharhinus leucas), habitat use has been widely examined in the eastern and western Gulf of Mexico; however, knowledge of their movements and the factors influencing them is lacking for populations in the more temperate north-central Gulf of Mexico. To examine how changes in hydrographic conditions affected the presence of young bull sharks in Mobile Bay, Alabama, thirty-five sharks were fitted with internal acoustic transmitters and monitored with an acoustic monitoring array consisting of thirty-three receivers between June 2009 and December 2010. Tagged sharks ranged in size from 60 to 114 cm fork length and were detected between the upper and lower portions of Mobile Bay. Despite a variety of freshwater sources associated with this highly productive estuary, sharks were most consistently detected at the largest input to the system – the Mobile and Tensaw Rivers. Our findings suggest a combination of hydrographic factors interact to influence the distribution of juvenile bull sharks in Mobile Bay. The factors affecting the probability of detecting at least one bull shark varied both temporally (2009 vs 2010) and spatially (upper vs lower bay). Electivity analysis demonstrated that bull sharks showed highest affinity for warm water (29–32°C), moderate salinities (10–11 psu) and normoxic waters (5–7 mg/l), although these patterns were not consistent between regions or across years. We suggest future studies coupling telemetry and hydrographic variables should, when possible, consider the interactions of multiple environmental parameters when defining the dynamic factors explaining the spatial distribution of coastal sharks. PMID:24841925

Distribution and dynamic habitat use of young bull sharks Carcharhinus leucas in a highly stratified northern Gulf of Mexico estuary.

PubMed

Drymon, J Marcus; Ajemian, Matthew J; Powers, Sean P

2014-01-01

Understanding how animals alter habitat use in response to changing abiotic conditions is important for effective conservation management. For bull sharks (Carcharhinus leucas), habitat use has been widely examined in the eastern and western Gulf of Mexico; however, knowledge of their movements and the factors influencing them is lacking for populations in the more temperate north-central Gulf of Mexico. To examine how changes in hydrographic conditions affected the presence of young bull sharks in Mobile Bay, Alabama, thirty-five sharks were fitted with internal acoustic transmitters and monitored with an acoustic monitoring array consisting of thirty-three receivers between June 2009 and December 2010. Tagged sharks ranged in size from 60 to 114 cm fork length and were detected between the upper and lower portions of Mobile Bay. Despite a variety of freshwater sources associated with this highly productive estuary, sharks were most consistently detected at the largest input to the system--the Mobile and Tensaw Rivers. Our findings suggest a combination of hydrographic factors interact to influence the distribution of juvenile bull sharks in Mobile Bay. The factors affecting the probability of detecting at least one bull shark varied both temporally (2009 vs 2010) and spatially (upper vs lower bay). Electivity analysis demonstrated that bull sharks showed highest affinity for warm water (29-32 °C), moderate salinities (10-11 psu) and normoxic waters (5-7 mg/l), although these patterns were not consistent between regions or across years. We suggest future studies coupling telemetry and hydrographic variables should, when possible, consider the interactions of multiple environmental parameters when defining the dynamic factors explaining the spatial distribution of coastal sharks.

Molecular and stable isotopic evidence for the occurrence of nitrite-dependent anaerobic methane-oxidizing bacteria in the mangrove sediment of Zhangjiang Estuary, China.

PubMed

Zhang, Manping; Luo, Yi; Lin, Li'an; Lin, Xiaolan; Hetharua, Buce; Zhao, Weijun; Zhou, Mengkai; Zhan, Qing; Xu, Hong; Zheng, Tianling; Tian, Yun

2018-03-01

Nitrite-dependent anaerobic methane oxidation (n-damo), which is mediated by "Candidatus Methylomirabilis oxyfera-like" bacteria, is unique in linking the carbon and nitrogen cycles. However, the niche and activity of n-damo bacteria in the mangrove ecosystem have not been confirmed. Here, we report the occurrence of the n-damo process in the mangrove wetland of the Zhangjiang Estuary, China. The widespread occurrence of n-damo bacteria in mangrove wetland was confirmed using real-time quantitative polymerase chain reaction (qPCR) assay, which showed that the abundance of Methylomirabilis oxyfera-like bacterial 16S rRNA and pmoA genes ranged from 2.43 × 10 6 to 2.09 × 10 7 and 2.07 × 10 6 to 3.38 × 10 7 copies per gram of dry soil in the examined sediment cores. The highest amount of targeting genes was all detected in the upper layer (0-20 cm). Phylogenetic analyses of n-damo bacterial 16S rRNA and pmoA genes illustrated the depth-specific distribution and high diversity of n-damo bacteria in the mangrove wetland. Stable isotope experiments further confirmed the occurrence of n-damo in the examined mangrove sediments, and the potential n-damo rates ranged from 25.93 to 704.08 nmol CO 2 per gram of dry soil per day at different depths of the sediment cores, with the n-damo being more active in the upper layer of the mangrove sediments. These results illustrate the existence of active M. oxyfera-like bacteria and indicate that the n-damo process is a previously overlooked microbial methane sink in the mangrove wetlands.

The status of the light-footed clapper rail

USGS Publications Warehouse

Wilbur, S.R.

1974-01-01

Only 12 California marsh areas are presently believed to be inhabited by the Light-footed Clapper Rail, and eight of these appear to support only 5-15 birds apiece. Tentative estimates for the other four are: Anaheim Bay 200, Upper Newport 30-35, Los Penasquitos 30, and Tijuana Estuary 150. These estimates, admittedly very rough, indicate a total Light-footed Rail population on only about 500 birds. Recognizing that rails are secretive and hard to inventory, the actual count could be somewhat higher, but I feel it is most unlikely that the number could be more than 750 birds altogether. Reductions in Light-footed Clapper Rail populations can be attributed almost entirely to loss of habitat. An estimated 26,000 acres of saltmarsh once existed between Santa Barbara and the Mexican border. At present there are approximately 8500 acres, much of which has been degraded by pollution, water diversion, and restriction of tidal flow. Of those areas currently occupied by Clapper Rails, few can be considered to have a very secure future. Of the four major areas only Anaheim Bay appears to be relatively safe from future habitat destruction. Tijuana Estuary, Los Penasquitos Lagoon, and Upper Newport Bay are all threatened by commercial developments that could reduce or destroy local rail populations. I have not visited Baja California, but I believe there is still a substantial population of Clapper Rails in the marshes around San Quintin Bay. Taxonomists do not agree on the subspecific identity of these birds, but some feel they are representatives of the Light-footed race. If so, it is fortunate to have a relatively secure (for now) reservoir of these birds, but whether the Light-footed Clapper Rail survives within the United States may well be decided within the next few years.

The role of the upper tidal estuary in wetland blue carbon storage and flux

USGS Publications Warehouse

Krauss, Ken W.; Noe, Gregory B.; Duberstein, Jamie A.; Conner, William H.; Stagg, Camille L.; Cormier, Nicole; Jones, Miriam C.; Bernhardt, Christopher E.; Lockaby, B. Graeme; From, Andrew S.; Doyle, Thomas W.; Day, Richard H.; Ensign, Scott H.; Pierfelice, Katherine N.; Hupp, Cliff R.; Chow, Alex T.; Whitbeck, Julie L.

2018-01-01

Carbon (C) standing stocks, C mass balance, and soil C burial in tidal freshwater forested wetlands (TFFW) and TFFW transitioning to low‐salinity marshes along the upper estuary are not typically included in “blue carbon” accounting, but may represent a significant C sink. Results from two salinity transects along the tidal Waccamaw and Savannah rivers of the US Atlantic Coast show total C standing stocks were 321‐1264 Mg C ha‐1 among all sites, generally shifting to greater soil storage as salinity increased. Carbon mass balance inputs (litterfall, woody growth, herbaceous growth, root growth, surface accumulation) minus C outputs (surface litter and root decomposition, gaseous C) over a period of up to 11 years were 340‐900 g C m‐2 yr‐1. Soil C burial was variable (7‐337 g C m‐2 yr‐1), and lateral C export was estimated as C mass balance minus soil C burial as 267‐849 g C m‐2yr‐1. This represents a large amount of C export to support aquatic biogeochemical transformations. Despite reduced C persistence within emergent vegetation, decomposition of organic matter, and higher lateral C export, total C storage increased as forests converted to marsh with salinization. These tidal river wetlands exhibited high N mineralization in salinity‐stressed forested sites and considerable P mineralization in low salinity marshes. Large C standing stocks and rates of C sequestration suggest that TFFW and oligohaline marshes are considerably important globally to coastal C dynamics and in facilitating energy transformations in areas of the world in which they occur.

A comparative study of Northern Ireland's estuaries based on the results of beam trawl fish surveys

NASA Astrophysics Data System (ADS)

Harrison, Trevor D.; Armour, Neil D.; McNeill, Michael T.; Moorehead, Peter W.

2017-11-01

The fish communities of Northern Ireland's estuaries were described and compared using data collected with a modified beam trawl over a six year period from 2009 to 2014. Multivariate analyses identified four estuary groups based on variations in their physico-chemical attributes. These groups broadly corresponded with the distribution and variation of estuary geomorphic types identified around the Irish coast. The dominant fish species captured were also among the main species reported in other North East Atlantic estuaries. A significant link between the estuary types and their fish communities was found; each estuary group contained a somewhat distinctive fish community. The fish communities also showed a significant relationship with the physico-chemical characteristics of the estuaries. Differences in fish species composition are attributed to habitat and environmental preferences of key estuary-associated species.

Coast-wide recruitment dynamics of Olympia oysters reveal limited synchrony and multiple predictors of failure.

PubMed

Wasson, Kerstin; Hughes, Brent B; Berriman, John S; Chang, Andrew L; Deck, Anna K; Dinnel, Paul A; Endris, Charlie; Espinoza, Michael; Dudas, Sarah; Ferner, Matthew C; Grosholz, Edwin D; Kimbro, David; Ruesink, Jennifer L; Trimble, Alan C; Vander Schaaf, Dick; Zabin, Chela J; Zacherl, Danielle C

2016-12-01

Recruitment of new propagules into a population can be a critical determinant of adult density. We examined recruitment dynamics in the Olympia oyster (Ostrea lurida), a species occurring almost entirely in estuaries. We investigated spatial scales of interannual synchrony across 37 sites in eight estuaries along 2,500 km of Pacific North American coastline, predicting that high vs. low recruitment years would coincide among neighboring estuaries due to shared exposure to regional oceanographic factors. Such synchrony in recruitment has been found for many marine species and some migratory estuarine species, but has never been examined across estuaries in a species that can complete its entire life cycle within the same estuary. To inform ongoing restoration efforts for Olympia oysters, which have declined in abundance in many estuaries, we also investigated predictors of recruitment failure. We found striking contrasts in absolute recruitment rate and frequency of recruitment failure among sites, estuaries, and years. Although we found a positive relationship between upwelling and recruitment, there was little evidence of synchrony in recruitment among estuaries along the coast, and only limited synchrony of sites within estuaries, suggesting recruitment rates are affected more strongly by local dynamics within estuaries than by regional oceanographic factors operating at scales encompassing multiple estuaries. This highlights the importance of local wetland and watershed management for the demography of oysters, and perhaps other species that can complete their entire life cycle within estuaries. Estuaries with more homogeneous environmental conditions had greater synchrony among sites, and this led to the potential for estuary-wide failure when all sites had no recruitment in the same year. Environmental heterogeneity within estuaries may thus buffer against estuary-wide recruitment failure, analogous to the portfolio effect for diversity. Recruitment failure was correlated with lower summer water temperature, higher winter salinity, and shorter residence time: all indicators of stronger marine influence on estuaries. Recruitment failure was also more common in estuaries with limited networks of nearby adult oysters. Large existing oyster networks are thus of high conservation value, while estuaries that lack them would benefit from restoration efforts to increase the extent and connectivity of sites supporting oysters. © 2016 by the Ecological Society of America.

Remanence of lead pollution in an urban river system: a multi-scale temporal and spatial study in the Seine River basin, France.

PubMed

Ayrault, S; Le Pape, P; Evrard, O; Priadi, C R; Quantin, C; Bonté, P; Roy-Barman, M

2014-03-01

Total lead (Pb) concentration and Pb isotopic ratio ((206)Pb/(20)7Pb) were determined in 140 samples from the Seine River basin (France), covering a period of time from 1945 to 2011 and including bed sediments (bulk and size fractionated samples), suspended particulate matter (SPM), sediment cores, and combined sewer overflow (CSO) particulate matter to constrain the spatial and temporal variability of the lead sources at the scale of the contaminated Seine River basin. A focus on the Orge River subcatchment, which exhibits a contrasted land-use pattern, allows documenting the relation between hydrodynamics, urbanization, and contamination sources. The study reveals that the Pb contamination due to leaded gasoline that peaked in the 1980s has a very limited impact in the river nowadays. In the upstream Seine River, the isotopic ratio analysis suggests a pervasive contamination which origin (coal combustion and/or gasoline lead) should be clarified. The current SPM contamination trend follows the urbanization/industrialization spatial trend. Downstream of Paris, the lead from historical use originating from the Rio Tinto mine, Spain ((206)Pb/(207)Pb=1.1634 ± 0.0001) is the major Pb source. The analysis of the bed sediments (bulk and grain size fractionated) highlights the diversity of the anthropogenic lead sources in relation with the diversity of the human activities that occurred in this basin over the years. The "urban" source, defined by waste waters including the CSO samples ((206)Pb/(207)Pb=1.157 ± 0.003), results of a thorough mixing of leaded gasoline with "historical" lead over the years. Finally, a contamination mixing scheme related to hydrodynamics is proposed.

Trophic niche width and overlap of two sympatric gulls in the southwestern mediterranean.

PubMed

González-Solís, Jacob; Oro, Daniel; Jover, Lluis; Ruiz, Xavier; Pedrocchi, Vittorio

1997-09-01

The diets of two potential competitor species, Audouin's Larus audouinii and yellow-legged gulls Larus cachinnans, were examined while they bred at the Chafarinas Islands during 1993, 1994, and 1995. Data were collected during two commercial fishing regimes: (1) trawling and purse seine fisheries, and (2) diurnal trawlers only. Since the food supply for the gulls in this area was heavily reliant on the activity of purse seine fisheries, these contrasting situations allowed us to analyze short-term effects, induced by daily changes in food supply, on niche width, dietary shift, and niche overlap between the two species. Overall, both species relied mainly on fish for food, especially Clupeiforms, in the case of Audouin's gull irrespective of the fishing situation, and in the case of the yellow-legged gull, only when purse seine fishing was in operation. When purse seine boats did not operate (food shortage), yellow-legged gulls broadened their niche, consuming equal amounts of all the feeding resources, and they showed a dietary shift toward a greater consumption of prey from refuse tips. In contrast, Audouin's gulls did not change their niche width, but showed a slight dietary shift away from the consumption of epipelagic fish, compensated by an increase in reliance on benthic-mesopelagic resources. Niche overlap was clearly higher on days when both fishing fleets operated, probably because a superabundant food resource facilitates high overlap without affecting coexistence between the two species. Since our study was developed on the basis of daily variations in food supply, and competition effects are to be expected on a longer-term basis, these changes can be seen as the outcome of the coexistence of two species in stable competitive equilibrium.

Biases in determining the diet of jumbo squid Dosidicus gigas (D' Orbigny 1835) (Cephalopoda: Ommastrephidae) off southern-central Chile (34°S-40°S)

NASA Astrophysics Data System (ADS)

Ibáñez, Christian M.; Arancibia, Hugo; Cubillos, Luis A.

2008-12-01

The diet of jumbo squid ( Dosidicus gigas) off southern-central Chile is described to examine potential biases in the determination of their main prey. Specimens were collected from catches using different fishing gear (jigging, trawl and purse-seine), from July 2003 to January 2004, and from December 2005 to October 2006. The stomach contents were analyzed in terms of frequency of occurrence, number, and weight of prey items and the diet composition was analyzed using Detrended Correspondence Analysis. In the industrial purse-seine fleet for jack mackerel ( Trachurus murphyi), the dominant prey of D. gigas was T. murphyi. In the industrial mid-trawl fishery for Patagonian grenadier ( Macruronus magellanicus), the dominant species in the diet of D. gigas was M. magellanicus. Similarly, Chilean hake ( Merluccius gayi) was the main prey in the diet of D. gigas obtained in the industrial trawl fishery for Chilean hake; and, in both artisanal fisheries (purse-seine for small pelagics and jigging), small pelagic fish and D. gigas were the main prey in the stomach contents of D. gigas. Cannibalism in D. gigas varied between different fleets and probably is related to stress behavior during fishing. The Detrended Correspondence Analysis ordination showed that the main prey in the diet of D. gigas is associated with the target species of the respective fishery. Consequently, biases are associated with fishing gear, leading to an overestimate in the occurrence of the target species in the diet. We recommend analyzing samples from jigging taken at the same time and place where the trawl and purse-seine fleets are operating to avoid this problem, and the application of new tools like stable isotope, heavy metal, and fatty acid signature analyses.

Suspended-sediment flux and retention in a backwater tidal slough complex near the landward boundary of an estuary

USGS Publications Warehouse

Morgan-King, Tara L.; Schoellhamer, David H.

2013-01-01

Backwater tidal sloughs are commonly found at the landward boundary of estuaries. The Cache Slough complex is a backwater tidal region within the Upper Sacramento–San Joaquin Delta that includes two features that are relevant for resource managers: (1) relatively high abundance of the endangered fish, delta smelt (Hypomesus transpacificus), which prefers turbid water and (2) a recently flooded shallow island, Liberty Island, that is a prototype for habitat restoration. We characterized the turbidity around Liberty Island by measuring suspended-sediment flux at four locations from July 2008 through December 2010. An estuarine turbidity maximum in the backwater Cache Slough complex is created by tidal asymmetry, a limited tidal excursion, and wind-wave resuspension. During the study, there was a net export of sediment, though sediment accumulates within the region from landward tidal transport during the dry season. Sediment is continually resuspended by both wind waves and flood tide currents. The suspended-sediment mass oscillates within the region until winter freshwater flow pulses flush it seaward. The hydrodynamic characteristics within the backwater region such as low freshwater flow during the dry season, flood tide dominance, and a limited tidal excursion favor sediment retention.

Long-term changes in abundance and diversity of macrophyte and waterfowl populations in an estuary with exotic macrophytes and improving water quality

USGS Publications Warehouse

Rybicki, N.B.; Landwehr, J.M.

2007-01-01

We assessed species-specific coverage (km2) of a submerged aquatic vegetation (SAV) community in the fresh and upper oligohaline Potomac Estuary from 1985 to 2001 using a method combining field observations of species-proportional coverage data with congruent remotely sensed coverage and density (percent canopy cover) data. Biomass (estimated by density-weighted coverage) of individual species was calculated. Under improving water quality conditions, exotic SAV species did not displace native SAV; rather, the percent of natives increased over time. While coverage-based diversity did fluctuate and increased, richness-based community turnover rates were not significantly different from zero. SAV diversity was negatively related to nitrogen concentration. Differences in functional traits, such as reproductive potential, between the dominant native and exotic species may explain some interannual patterns in SAV. Biomass of native, as well as exotic, SAV species varied with factors affecting water column light attenuation. We also show a positive response by a higher trophic level, waterfowl, to SAV communities dominated by exotic SAV from 1959 to 2001. ?? 2007, by the American Society of Limnology and Oceanography, Inc.

Trophic interactions and direct physical effects control phytoplankton biomass and production in an estuary

USGS Publications Warehouse

Alpine, A.E.; Cloern, J.E.

1992-01-01

San Francisco Bay has recently been invaded by the suspension-feeding clam Potamocorbula amurensis. Previous work has shown that phytoplankton biomass in the upper estuary is low (2-3 mg Chl a m-3) during seasonal periods of high river flow and short residence time and it is usually high (peak >30 mg Chl a m-3) during the summer-autumn seasons of low river flow and long residence time. However since P. amurensis became widespread and abundant in 1987, the summer phytoplankton biomass maximum has disappeared, presumably because of increased grazing pressure by this newly introduced species. For 1977-1990, mean estimated primary production was only 39 g C m-2 yr-1 during years when bivalve suspension feeders were abundant (>2000 m-2), compared to 106 g C m-2 yr-1 when bivalves were absent or present in low numbers. These observations support the hypothesis that seasonal and interannual fluctuations in estuarine phytoplankton biomass and primary production can be regulated jointly by direct physical effects (eg river-driven transport) and trophic interactions (episodes of enhanced grazing pressure by immigrant populations of benthic suspension feeders). -from Authors

Building Regional Threat-Based Networks for Estuaries in the Western United States

PubMed Central

Merrifield, Matthew S.; Hines, Ellen; Liu, Xiaohang; Beck, Michael W.

2011-01-01

Estuaries are ecologically and economically valuable and have been highly degraded from both land and sea. Estuarine habitats in the coastal zone are under pressure from a range of human activities. In the United States and elsewhere, very few conservation plans focused on estuaries are regional in scope; fewer still address threats to estuary long term viability.We have compiled basic information about the spatial extent of threats to identify commonalities. To do this we classify estuaries into hierarchical networks that share similar threat characteristics using a spatial database (geodatabase) of threats to estuaries from land and sea in the western U.S.Our results show that very few estuaries in this region (16%) have no or minimal stresses from anthropogenic activity. Additionally, one quarter (25%) of all estuaries in this study have moderate levels of all threats. The small number of un-threatened estuaries is likely not representative of the ecological variability in the region and will require working to abate threats at others. We think the identification of these estuary groups can foster sharing best practices and coordination of conservation activities amongst estuaries in any geography. PMID:21387006

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.; Diefenderfer, Heida L.

The purpose of this document is to describe research, monitoring, and evaluation (RME) for the Federal Columbia River Estuary Program, hereafter called 'the Estuary Program'. The intent of this RME effort is to provide data and information to evaluate progress toward meeting program goals and objectives and support decision making in the Estuary Program. The goal of the Estuary Program is to understand, conserve, and restore the estuary ecosystem to improve the performance of listed salmonid populations. The Estuary Program has five general objectives, designed to fulfill the program goal, as follows: (1) Understand the primary stressors affecting ecosystem controllingmore » factors, such as ocean conditions and invasive species. (2) Conserve and restore factors controlling ecosystem structures and processes, such as hydrodynamics and water quality. (3) Increase the quantity and quality of ecosystem structures, i.e., habitats, juvenile salmonids use during migration through the estuary. (4) Maintain the food web to benefit salmonid performance. (5) Improve salmonid performance in terms of life history diversity, foraging success, growth, and survival. The goal of estuary RME is to provide pertinent and timely research and monitoring information to planners, implementers, and managers of the Estuary Program. The goal leads to three primary management questions pertaining to the main focus of the Estuary Program: estuary habitat conservation and restoration. (1) Are the estuary habitat actions achieving the expected biological and environmental performance targets? (2) Are the offsite habitat actions in the estuary improving juvenile salmonid performance and which actions are most effective at addressing the limiting factors preventing achievement of habitat, fish, or wildlife performance objectives? (3) What are the limiting factors or threats in the estuary/ocean preventing the achievement of desired habitat or fish performance objectives? Performance measures for the estuary are monitored indicators that reflect the status of habitat conditions and fish performance, e.g., habitat connectivity, survival, and life history diversity. Performance measures also pertain to implementation and compliance. Such measures are part of the monitoring, research, and action plans in this estuary RME document. Performance targets specific to the estuary were not included in the 2007 draft Biological Opinion.« less

The risk of harmful algal blooms (HABs) in the oyster-growing estuaries of New South Wales, Australia.

PubMed

Ajani, Penelope; Brett, Steve; Krogh, Martin; Scanes, Peter; Webster, Grant; Armand, Leanne

2013-06-01

The spatial and temporal variability of potentially harmful phytoplankton was examined in the oyster-growing estuaries of New South Wales. Forty-five taxa from 31 estuaries were identified from 2005 to 2009. Harmful species richness was latitudinally graded for rivers, with increasing number of taxa southward. There were significant differences (within an estuary) in harmful species abundance and richness for 11 of 21 estuaries tested. Where differences were observed, these were predominately due to species belonging to the Pseudo-nitzschia delicatissima group, Dinophysis acuminata, Dictyocha octonaria and Prorocentrum cordatum with a consistent upstream versus downstream pattern emerging. Temporal (seasonal or interannual) patterns in harmful phytoplankton within and among estuaries were highly variable. Examination of harmful phytoplankton in relation to recognised estuary disturbance measures revealed species abundance correlated to estuary modification levels and flushing time, with modified, slow flushing estuaries having higher abundance. Harmful species richness correlated with bioregion, estuary modification levels and estuary class, with southern, unmodified lakes demonstrating greater species density. Predicting how these risk taxa and risk zones may change with further estuary disturbance and projected climate warming will require more focused, smaller scale studies aimed at a deeper understanding of species-specific ecology and bloom mechanisms. Coupled with this consideration, there is an imperative for further taxonomic, ecological and toxicological investigations into poorly understood taxa (e.g. Pseudo-nitzschia).

AGARD Flight Test Techniques Series. Volume 12. The Principles of Flight Test Assessment of Flight-Safety-Critical Systems in Helicopters (Les Principes de l’Evaluation, dans le Cadre des Essais en Vol, des Systemes Indispensables a la Securite de Vol des Helicopteres)

DTIC Science & Technology

1994-08-01

AGARD-AG-300 Vol. 12 04 ADVISORY GROUP FOR AEROSPACE RESEARCH & DEVELOPMENT 7 RUE ANCELLE, 92200 NEUILLY-SUR-SEINE, FRANCE AUG 0195 AGARDograph 300...AGARD Flight Test Techniques Series Volume 12 on The Principles of Flight Test Assessment of Flight-Safety-Critical Systems in Helicopters (Les...and Availability on Back Cover AGARD-AG-300 Vol. 12 ADVISORY GROUP FOR AEROSPACE RESEARCH & DEVELOPMENT 7 RUE ANCELLE, 92200 NEUILLY-SUR-SEINE, FRANCE

Ein Blick ins Licht. Einblicke in die Natur des Lichts und des Sehens, in Farbe und Fotografie.

NASA Astrophysics Data System (ADS)

Falk, D. S.; Brill, D. R.; Stork, D. G.

This book is a German translation, by A. Ehlers, of the American original "Seeing the light. Optics in nature, photography, color, vision, and holography", published in 1986. Contents: 1. Die Haupteigenschaften des Lichts. 2. Grundlagen der geometrischen Optik. 3. Spiegel und Linsen. 4. Kamera und Fotografie. 5. Das menschliche Auge und sein Sehvermögen. I: Wie das Bild erzeugt wird. 6. Optische Instrumente. 7. Das menschliche Auge und sein Sehvermögen. II: Bildverarbeitung. 8. Räumliches Sehen und Tiefenwahrnehmung. 9. Farbe. 10. Farbwahrnehmung. 11. Farbfotografie. 12. Wellenoptik. 13. Streuung und Polarisation. 14. Holografie. 15. Ein Blick in die moderne Physik.

Earth Observations taken by the Expedition 16 Crew

NASA Image and Video Library

2008-01-07

ISS016-E-021564 (7 Jan. 2008) --- Paris, France is featured in this image photographed by an Expedition 16 crewmember on the International Space Station. A crisp, clear winter day over France provided a detailed view of the city of Paris. This image shows the recognizable street pattern of the city - and some of the world's most notable landmarks - along the Seine River. One of the main avenues radiating like spokes from the Arc de Triomphe (lower right) is the Avenue des Champs-Elysees running southeast to the Garden of Tuileries (Jardin des Tuileries). The garden -- recognizable by its light green color relative to the surrounding built materials -- was originally commissioned by Catherine de Medici in 1559, and is now bounded by the Place de la Concorde to the northeast and the Louvre museum along the Seine River at the southeast end. Other, similarly colored parks and greenspaces are visible throughout the image. Farther south on the Seine is the Ile de la Cite, location of the famous Notre Dame cathedral. Perhaps most prominent is the characteristic "A" profile of the Eiffel Tower west of the Jardin des Tuileries, highlighted by morning sunlight.

Multiconfiguration electromagnetic induction survey for paleochannel internal structure imaging: a case study in the alluvial plain of the River Seine, France

NASA Astrophysics Data System (ADS)

Rejiba, Fayçal; Schamper, Cyril; Chevalier, Antoine; Deleplancque, Benoit; Hovhannissian, Gaghik; Thiesson, Julien; Weill, Pierre

2018-01-01

The La Bassée floodplain area is a large groundwater reservoir controlling most of the water exchanged between local aquifers and hydrographic networks within the Seine River basin (France). Preferential flows depend essentially on the heterogeneity of alluvial plain infilling, whose characteristics are strongly influenced by the presence of mud plugs (paleomeander clayey infilling). These mud plugs strongly contrast with the coarse sand material that composes most of the alluvial plain, and can create permeability barriers to groundwater flows. A detailed knowledge of the global and internal geometry of such paleomeanders can thus lead to a comprehensive understanding of the long-term hydrogeological processes of the alluvial plain. A geophysical survey based on the use of electromagnetic induction was performed on a wide paleomeander, situated close to the city of Nogent-sur-Seine in France. In the present study we assess the advantages of combining several spatial offsets, together with both vertical and horizontal dipole orientations (six apparent conductivities), thereby mapping not only the spatial distribution of the paleomeander derived from lidar data but also its vertical extent and internal variability.

[Distribution characteristics of dissolved oxygen and mechanism of hypoxia in the upper estuarine zone of the Daliaohe River].

PubMed

Yang, Li-Na; Li, Zheng-Yan; Zhang, Xue-Qing

2011-01-01

Based on field surveys in the upper estuarine zone of the Daliaohe River in Spring and Summer of 2009, the spatial and temporal distributions of dissolved oxygen were analyzed and the mechanism of hypoxia were preliminarily discussed. The results indicated that DO concentrations were higher in the river mouth and lower in the upper reaches, higher in surface layers and lower in bottom concerning its spatial distribution. For its temporal distribution, DO concentrations were higher in daytime and lower at night, higher in Spring and lower in Summer. The DO concentrations in the upper estuarine zone of the Daliaohe River in Summer ranged between 1.36-4.77 mg/L with an average of 3.44 mg/L. The concentrations in the lower reaches were higher with an average of 3.94 mg/L. A large hypoxia area was recorded in Summer in the upper reaches of the estuary starting from about 45 km away from the river gate with an average DO concentration of 2.33 mg/L and a minimum of 1.36 mg/L. The correlation analysis showed that DO concentration was significantly correlated with nutrients and permanganate index. Excessive discharge of nutrients and organic pollutants were, therefore, main factors causing hypoxia, and water column stratification due to temperature rise in Summer in surface layers led to further reduction of DO in bottom layers of the water.

Intertidal biofilm distribution underpins differential tide-following behavior of two sandpiper species (Calidris mauri and Calidris alpina) during northward migration

NASA Astrophysics Data System (ADS)

Jiménez, Ariam; Elner, Robert W.; Favaro, Corinna; Rickards, Karen; Ydenberg, Ronald C.

2015-03-01

The discovery that some shorebird species graze heavily on biofilm adds importance to elucidating coastal processes controlling biofilm, as well as impetus to better understand patterns of shorebird use of intertidal flats. Western sandpipers (Calidris mauri) and dunlin (Calidris alpina) stopover in the hundreds of thousands on the Fraser River estuary, British Columbia, Canada, during northward migration to breeding areas. Western sandpipers show greater modification of tongue and bill morphology for biofilm feeding than dunlin, and their diet includes more biofilm. Therefore, we hypothesized that these congeners differentially use the intertidal area. A tide following index (TFI) was used to describe their distributions in the upper intertidal during ebbing tides. Also, we assessed sediment grain size, biofilm (= microphytobenthic or MPB) biomass and invertebrate abundance. Foraging dunlin closely followed the ebbing tide line, exploiting the upper intertidal only as the tide retreated through this area. In contrast, western sandpipers were less prone to follow the tide, and spent more time in the upper intertidal. Microphytobenthic biomass and sediment water content were highest in the upper intertidal, indicating greater biofilm availability for shorebirds in the first 350 m from shore. Invertebrate density did not differ between sections of the upper intertidal. Overall, western sandpiper behaviour and distribution more closely matched MPB biofilm availability than invertebrate availability. Conservation of sandpipers should consider physical processes, such as tides and currents, which maintain the availability of biofilm, a critical food source during global migration.

Long-Term Effects of Changing Land Use Practices on Surface Water Quality in a Coastal River and Lagoonal Estuary

NASA Astrophysics Data System (ADS)

Rothenberger, Meghan B.; Burkholder, Joann M.; Brownie, Cavell

2009-09-01

The watershed of the Neuse River, a major tributary of the largest lagoonal estuary on the U.S. mainland, has sustained rapid growth of human and swine populations. This study integrated a decade of available land cover and water quality data to examine relationships between land use changes and surface water quality. Geographic Information Systems (GIS) analysis was used to characterize 26 subbasins throughout the watershed for changes in land use during 1992-2001, considering urban, agricultural (cropland, animal as pasture, and densities of confined animal feed operations [CAFOs]), forested, grassland, and wetland categories and numbers of wastewater treatment plants (WWTPs). GIS was also used together with longitudinal regression analysis to identify specific land use characteristics that influenced surface water quality. Total phosphorus concentrations were significantly higher during summer in subbasins with high densities of WWTPs and CAFOs. Nitrate was significantly higher during winter in subbasins with high numbers of WWTPs, and organic nitrogen was higher in subbasins with higher agricultural coverage, especially with high coverage of pastures fertilized with animal manure. Ammonium concentrations were elevated after high precipitation. Overall, wastewater discharges in the upper, increasingly urbanized Neuse basin and intensive swine agriculture in the lower basin have been the highest contributors of nitrogen and phosphorus to receiving surface waters. Although nonpoint sources have been emphasized in the eutrophication of rivers and estuaries such as the Neuse, point sources continue to be major nutrient contributors in watersheds sustaining increasing human population growth. The described correlation and regression analyses represent a rapid, reliable method to relate land use patterns to water quality, and they can be adapted to watersheds in any region.

Real-time monitoring of nutrients in the Changjiang Estuary reveals short-term nutrient-algal bloom dynamics

NASA Astrophysics Data System (ADS)

Wang, Kui; Chen, Jianfang; Ni, Xiaobo; Zeng, Dingyong; Li, Dewang; Jin, Haiyan; Glibert, Patricia M.; Qiu, Wenxian; Huang, Daji

2017-07-01

The Changjiang Estuary is a large-river estuary ecosystem in the East China Sea, and its plume, the Changjiang Diluted Water (CDW), transports a large mass of nutrients (NO3- + NO2-, PO43-, SiO32-) to the shelf sea, leading to substantial eutrophication; the CDW also supports high primary production. However, relationships between nutrient delivery and phytoplankton responses have been difficult to establish, as many nutrient delivery events and algal blooms are episodic, and the CDW may expand or become detached with changing winds. To study the relationship between nutrient delivery events, algal blooms and estuarine metabolism dynamics, a buoy system was deployed in the CDW from 9 September to 10 October 2013, with measurements of chlorophyll a and dissolved nutrients. Day-to-day nutrient increases covaried with salinity decreases, regulated by both the spring-neap tidal cycle and wind events. Several specific nutrient injection periods were detected, each followed by nutrient drawdown and chlorophyll a accumulation (algal blooms). Each algal bloom had its own unique pattern of nutrient uptake based on change in nutrient ratios (ΔN:ΔP; ΔN:ΔSi) and appeared to be dominated by different algal groups. These events occurred under weak wind and stable hydrodynamic conditions. Ecosystem metabolism based on net community production (NCP) showed that the upper estuarine ecosystem was autotrophic when chlorophyll a accumulated, but heterotrophic when wind-induced mixing strengthened, and upwelling brought organic-rich water to the near surface. In spite of several short-lived algal blooms, the average NCPdaily was negative during the observation period, indicating a net source of CO2 to the atmosphere.

Predicting fish community properties within estuaries: Influence of habitat type and other environmental features

NASA Astrophysics Data System (ADS)

França, Susana; Vasconcelos, Rita P.; Fonseca, Vanessa F.; Tanner, Susanne E.; Reis-Santos, Patrick; Costa, Maria José; Cabral, Henrique N.

2012-07-01

Statistical models predicting species distributions are essential not only to increase knowledge on species but for their application in conservation and ecologically-based management. The variation of fish species richness and abundance in the most representative habitats (saltmarsh, mudflat and subtidal) in five estuaries along the Portuguese coast was analysed through seasonal sampling surveys in 2009. Generalized additive models (GAM) were developed to describe the variation of species richness and abundances with a set of geomorphologic, hydrologic and environmental characteristics from the sampled estuaries and habitats. GAM were chosen as the complex interactions dominating these ecosystems and species distribution are non-linear. Final models built for each estuary and for all estuaries together performed well during the calibration phase and also during the validation phase, where an unused data sub-set from each estuary was used. There was not a similar combination of variables retained by the models for the studied estuaries but factors such as the area of the habitat, the distance to estuary mouth, percentage of mud in the sediment and depth were commonly retained. The partial effect of these predictor variables on the variation of species richness and abundance in the estuaries varied markedly and the importance of preserving the heterogeneity of habitats within estuaries was highlighted. Models for each individual estuary performed better than models for estuaries combined. Predictive models could be useful as a preliminary tool to prepare long-term conservation plans at different scales.

Chemical and physical characteristics of water in estuaries of Texas, October 1976-September 1978

USGS Publications Warehouse

Fisher, J.C.

1982-01-01

The coastal waters of Texas are not classical estuaries, but are similar to them in ecosystems and mixing phenomena. A description of various types of estuaries is presented in "Estuaries" edited by Lauff (1967, p. 3-11). The term estuary as used in this report, refers to concomitant water bodies in which streamflow mixes with seawater.

Use of the USEPA Estuary Nitrogen Model to Estimate Concentrations of Total Nitrogen in Estuaries Using Loads Calculated by Watershed Models and Monitoring Data

EPA Science Inventory

We use USEPA’s Estuary Nitrogen Model (ENM) to calculate annual average concentrations of total nitrogen (TN) in ten estuaries or sub-estuaries along the Atlantic coast from New Hampshire to Florida. These include a variety of systems, ranging from strongly-flushed bays to weakly...

Linking behavior, physiology, and survival of Atlantic Salmon smolts during estuary migration

USGS Publications Warehouse

Stich, Daniel S.; Zydlewski, Gayle B.; Kocik, John F.; Zydlewski, Joseph D.

2015-01-01

Decreased marine survival is identified as a component driver of continued declines of Atlantic Salmon Salmo salar. However, estimates of marine mortality often incorporate loss incurred during estuary migration that may be mechanistically distinct from factors affecting marine mortality. We examined movements and survival of 941 smolts (141 wild and 800 hatchery-reared fish) released in freshwater during passage through the Penobscot River estuary, Maine, from 2005 to 2013. We related trends in estuary arrival date, movement rate, and survival to fish characteristics, migratory history, and environmental conditions in the estuary. Fish that experienced the warmest thermal history arrived in the estuary 8 d earlier than those experiencing the coolest thermal history during development. Estuary arrival date was 10 d later for fish experiencing high flow than for fish experiencing low flow. Fish released furthest upstream arrived in the estuary 3 d later than those stocked further downstream but moved 0.5 km/h faster through the estuary. Temporally, movement rate and survival in the estuary both peaked in mid-May. Spatially, movement rate and survival both decreased from freshwater to the ocean. Wild smolts arrived in the estuary later than hatchery fish, but we observed no change in movement rate or survival attributable to rearing history. Fish with the highest gill Na+, K+-ATPase activity incurred 25% lower mortality through the estuary than fish with the lowest gill Na+, K+-ATPase activity. Smolt survival decreased (by up to 40%) with the increasing number of dams passed (ranging from two to nine) during freshwater migration. These results underscore the importance of physiological preparedness on performance and the delayed, indirect effects of dams on survival of Atlantic Salmon smolts during estuary migration, ultimately affecting marine survival estimates.

Tracing water and suspended matter in Raritan and Lower New York Bays using dissolved and particulate elemental concentrations

USGS Publications Warehouse

Paulson, A.J.

2005-01-01

The concentrations of 22 elements also were measured in the suspended matter of Raritan and Lower New York Bays and brackish water sources. The elemental composition of the suspended matter in surface and bottom waters was correlated with Fe concentrations, which ranged between 50 and 900 μmol g− 1. Statistical differences among the geographical regions were detected in the relationships of Ti, Ni, Co, As, and U with Fe, with particulate As being an especially strong geochemical indicator of Raritan River particles. The geochemical signatures of Lower New York Bay particles were similar to those of Upper New York Bay. The geochemical signatures of Raritan River particles were distinctly different than those of the Upper New York Bay, but the influence of Raritan River particles appeared to be limited to only inner Raritan Bay. This study illustrates the utility of trace elements for characterization of physical processes in complex estuaries.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Gary E.; Diefenderfer, Heida L.; Ebberts, Blaine D.

The purpose ofthis document is to describe research, monitoring, and evaluation (RME) for the Federal Columbia River Estuary Program. The intent of this RME effort is to provide data and information to evaluate progress toward meeting program goals and objectives and support decision-making in the Estuary Program. The goal of the Estuary Program is to understand, conserve, and restore the estuary ecosystem to improve the performance of listed salmonid populations. The Estuary Program has five general objectives, designed to fulfill the program goal, as follows. 1. Understand the primary stressors affecting ecosystem controlling factors, such as ocean conditions and invasivemore » species. 2. Conserve and restore factors controlling ecosystem structures and processes, such as hydrodynamics and water quality. 3. Increase the quantity and quality of ecosystem structures, i.e., habitats, juvenile salmonids use during migration through the estuary. 4. Maintain the food web to benefit salmonid performance. 5. Improve salmonid performance in terms of life history diversity, foraging success, growth, and survival. The goal of estuary RME is to provide pertinent and timely research and monitoring information to planners, implementers, and managers of the Estuary Program. In conclusion, the estuary RME effort is designed to meet the research and monitoring needs of the estuary Program using an adaptive management process. Estuary RME's success and usefulness will depend on the actual conduct of adaptive management, as embodied in the objectives, implrementation, data, reporting, and synthesis, evaluation, and decision-making described herein.« less

Daily variation in ingress of fall-spawned larval fishes into Delaware Bay in relation to alongshore and along-estuary wind components

NASA Astrophysics Data System (ADS)

Schieler, Brittany M.; Hale, Edward A.; Targett, Timothy E.

2014-12-01

Identifying factors that affect ingress of larval fishes from offshore spawning areas into estuarine nurseries is important to improve understanding of variability in recruitment of many coastal marine species. This study investigated the ingress of larval Atlantic croaker (Micropogonias undulatus), Atlantic menhaden (Brevoortia tyrannus), and summer flounder (Paralichthys dentatus) at Roosevelt Inlet, near the mouth of Delaware Bay, USA in relation to short-term wind events. Nightly abundances, from November 15 to December 15, 2010, were analyzed with alongshore and along-estuary wind components (direction and speed) using cross-correlation analysis to determine if winds affect larval ingress. Ingress of Atlantic croaker and summer flounder correlated with along-estuary winds, whereas Atlantic menhaden showed no significant correlations with either alongshore or along-estuary winds. Although along-estuary winds during this period were predominantly down-estuary, Atlantic croaker ingress was correlated with positive along-estuary winds (blowing up-estuary), with a three-day lag; and a particularly large ingress peak occurred following the largest up-estuary wind peak. Ingress of summer flounder was correlated with negative along-estuary winds (blowing down-estuary), with a two-day lag. These results suggest that species-specific vertical position in the water column influenced ingress into Delaware Bay. The lag results also suggest that ingressing Atlantic croaker and summer flounder may have a pooling stage outside the mouth of Delaware Bay.

Groundwater-derived nutrient inputs to the Upper Gulf of Thailand

NASA Astrophysics Data System (ADS)

Burnett, William C.; Wattayakorn, Gullaya; Taniguchi, Makoto; Dulaiova, Henrieta; Sojisuporn, Pramot; Rungsupa, Sompop; Ishitobi, Tomotoshi

2007-01-01

We report here the first direct measurements of nutrient fluxes via groundwater discharge into the Upper Gulf of Thailand. Nutrient and standard oceanographic surveys were conducted during the wet and dry seasons along the Chao Phraya River, Estuary and out into the Upper Gulf of Thailand. Additional measurements in selected near-shore regions of the Gulf included manual and automatic seepage meter deployments, as well as nutrient evaluations of seepage and coastal waters. The river transects characterized the distribution of biogeochemical parameters in this highly contaminated urban environment. Seepage flux measurements together with nutrient analyses of seepage fluids were used to estimate nutrient fluxes via groundwater pathways for comparison to riverine fluxes. Our findings show that disseminated seepage of nutrient-rich mostly saline groundwater into the Upper Gulf of Thailand is significant. Estimated fluxes of dissolved inorganic nitrogen (DIN) supplied via groundwater discharge were 40-50% of that delivered by the Chao Phraya River, inorganic phosphate was 60-70%, and silica was 15-40%. Dissolved organic nitrogen (DON) and phosphorus (DOP) groundwater fluxes were also high at 30-40% and 30-130% of the river inputs, respectively. These observations are especially impressive since the comparison is being made to the river that is the largest source of fresh water into the Gulf of Thailand and flows directly through the megacity of Bangkok with high nutrient loadings from industrial and domestic sources.

Residual estuarine circulation in the Mandovi, a monsoonal estuary: A three-dimensional model study

NASA Astrophysics Data System (ADS)

Vijith, V.; Shetye, S. R.; Baetens, K.; Luyten, P.; Michael, G. S.

2016-05-01

Observations in the Mandovi estuary, located on the central west coast of India, have shown that the salinity field in this estuary is remarkably time-dependent and passes through all possible states of stratification (riverine, highly-stratified, partially-mixed and well-mixed) during a year as the runoff into the estuary varies from high values (∼1000 m3 s-1) in the wet season to negligible values (∼1 m3 s-1) at end of the dry season. The time-dependence is forced by the Indian Summer Monsoon (ISM) and hence the estuary is referred to as a monsoonal estuary. In this paper, we use a three-dimensional, open source, hydrodynamic, numerical model to reproduce the observed annual salinity field in the Mandovi. We then analyse the model results to define characteristics of residual estuarine circulation in the Mandovi. Our motivation to study this aspect of the Mandovi's dynamics is derived from the following three considerations. First, residual circulation is important to long-term evolution of an estuary; second, we need to understand how this circulation responds to strongly time-dependent runoff forcing experienced by a monsoonal estuary; and third, Mandovi is among the best studied estuaries that come under the influence of ISM, and has observations that can be used to validate the model. Our analysis shows that the residual estuarine circulation in the Mandovi shows four distinct phases during a year: a river like flow that is oriented downstream throughout the estuary; a salt-wedge type circulation, with flow into the estuary near the bottom and out of the estuary near the surface restricted close to the mouth of the estuary; circulation associated with a partially-mixed estuary; and, the circulation associated with a well-mixed estuary. Dimensional analysis of the field of residual circulation helped us to establish the link between strength of residual circulation at a location and magnitude of river runoff and rate of mixing at the location. We then derive an analytical expression that approximates exchange velocity (bottom velocity minus near freshwater velocity at a location) as a function of freshwater velocity and rate of mixing.

The divergent environmental characteristics of permanently-open, seasonally-open and normally-closed estuaries of south-western Australia

NASA Astrophysics Data System (ADS)

Chuwen, Benjamin M.; Hoeksema, Steeg D.; Potter, Ian C.

2009-10-01

This study has compared the environmental characteristics of the basins and saline lower reaches of the tributaries of eight estuaries on the south coast of Western Australia, which differ in their degree of connectivity with the ocean. Although four estuaries between 115.1° and 121.8° E along that coast remain permanently open to the ocean, the others only become open when the volume of river discharge is sufficient to breach the prominent sand bars at their mouths, which occurs annually following heavy winter and early spring rainfall in some estuaries (seasonally open) and infrequently in others (normally closed). Estuaries to the west of 118.5° E are predominantly permanently open, e.g. Oyster Harbour, or seasonally open, e.g. Broke, Irwin and Wilson inlets, whereas those further east, e.g. Wellstead Estuary and Hamersley, Culham and Stokes inlets, where annual rainfall and thus discharge are much lower, only become open after exceptionally heavy discharge. In permanently and seasonally-open estuaries, pronounced haloclines and oxyclines are present in the narrow rivers but not the wide basins where the waters are subjected to wind-driven mixing. The extent of cyclical seasonal fluctuations in environmental conditions differed markedly among the three seasonally-open estuaries and between years in one of those systems. These differences reflected variations in the relationship between the volume of fluvial discharge, which is determined by a combination of the amount of local rainfall, catchment size and extent of clearing of native vegetation, and the amount of intrusion by marine waters, which is largely controlled by the size and duration of the opening of the estuary mouth. The mean seasonal salinities in the basins of the three normally-closed estuaries increased over three years of very low rainfall to 64 in the deepest of these estuaries (Stokes Inlet) to 145 in Hamersley Inlet and to 296 in the shallowest estuary (Culham Inlet). These results demonstrate that the environmental characteristics of estuaries on the south coast of Western Australia differ markedly, even among those of the same type, e.g. seasonally-open estuaries or normally-closed estuaries.

Estuaries of the northeastern United States: Habitat and land use signatures

USGS Publications Warehouse

Roman, C.T.; Jaworski, N.; Short, F.T.; Findlay, S.; Warren, R.S.

2000-01-01

Geographic signatures are physical, chemical, biotic, and human-induced characteristics or processes that help define similar or unique features of estuaries along latitudinal or geographic gradients. Geomorphologically, estuaries of the northeastern U.S., from the Hudson River estuary and northward along the Gulf of Maine shoreline, are highly diverse because of a complex bedrock geology and glacial history. Back-barrier estuaries and lagoons occur within the northeast region, but the dominant type is the drowned-river valley, often with rocky shores. Tidal range and mean depth of northeast estuaries are generally greater when compared to estuaries of the more southern U.S. Atlantic coast and Gulf of Mexico. Because of small estuarine drainage basins, low riverine flows, a bedrock substrate, and dense forest cover, sediment loads in northeast estuaries are generally quite low and water clarity is high. Tidal marshes, seagrass meadows, intertidal mudflats, and rocky shores represent major habitat types that fringe northeast estuaries, supporting commercially-important fauna, forage nekton and benthos, and coastal bird communities, while also serving as links between deeper estuarine waters and habitats through detritus-based pathways. Regarding land use and water quality trends, portions of the northeast have a history of over a century of intense urbanization as reflected in increased total nitrogen and total phosphorus loadings to estuaries, with wastewater treatment facilities and atmospheric deposition being major sources. Agricultural inputs are relatively minor throughout the northeast, with relative importance increasing for coastal plain estuaries. Identifying geographic signatures provides an objective means for comparing the structure function, and processes of estuaries along latitudinal gradients.

Catchment land use predicts benthic vegetation in small estuaries

PubMed Central

Warry, Fiona Y.; Reich, Paul; Mac Nally, Ralph; Woodland, Ryan J.

2018-01-01

Many estuaries are becoming increasingly eutrophic from human activities within their catchments. Nutrient loads often are used to assess risk of eutrophication to estuaries, but such data are expensive and time consuming to obtain. We compared the percent of fertilized land within a catchment, dissolved inorganic nitrogen loads, catchment to estuary area ratio and flushing time as predictors of the proportion of macroalgae to total vegetation within 14 estuaries in south-eastern Australia. The percent of fertilized land within the catchment was the best predictor of the proportion of macroalgae within the estuaries studied. There was a transition to a dominance of macroalgae once the proportion of fertilized land in the catchment exceeded 24%, highlighting the sensitivity of estuaries to catchment land use. PMID:29473004

Unharvested fishes in the U. S. commercial fishery of western Lake Erie in 1969

USGS Publications Warehouse

Van Meter, Harry D.

1973-01-01

Potential commercial fish production was estimated for U.S. waters of western Lake Erie in 1969 from pounds landed and pounds discarded. Periodic observations of catches in haul seines and trap nets revealed that about 37% of the catch (by weight) in haul seines and 26% of that in trap nets were low-value fishes that were discarded. Projection of these discarded catches to include the total fishing effort indicated that an additional 2.8 million lb of low-value species would have been landed in 1969 if a reasonable profit had been assured. It is concluded that the sustained yield could be increased considerably with only a moderate increase in fishing effort.

Changes in sediment-associated trace element concentrations in the Seine river basin (1994-2001)

USGS Publications Warehouse

Meybeck, Michel; Horowitz, A.J.; Grosbois, C.; Gueguen, Y.; ,

2003-01-01

In the 1980's, based on the concentrations of particulate-associated Hg, Cd, Pb, Cu and Zn relative to very low natural background levels, the Seine River Basin was one of the most impacted in the world. Over the past 20 years, there has been a general decline in these elevated concentrations that parallels declines in Paris sewage sludge trace element levels. Within the basin, marked differences in spatial and temporal geochemical patterns have been observed: (1) between major tributaries, (2) between trace elements, and (3) with stream order and population density, all of which illustrate the complexity of the geochemical processes ongoing in the basin.

Comparison of Nutrient Drivers and Response Metrics in Oregon Estuaries

EPA Science Inventory

With the goal of assessing sensitivity to nutrient enrichment, we present a cross-estuary comparison of nutrient sources, levels, and biological responses (phytoplankton and macroalgae) for thirteen Oregon estuaries. Nitrogen levels in the upstream portions of the estuaries are ...

MAPPING BATHYMETRY AND BOTTOM TYPE IN A SHALLOW ESTUARY

EPA Science Inventory

Bathymetry and bottom type are important in characterizing estuaries and their ecology but hard to map, especially in shallow estuaries. Acoustic backscattering was used to remotely sense these properties in the shallow Slocums River Estuary of Massachusetts. Acoustic pulses were...

KNOW YOUR ESTUARY: THE WATER THROUGH TIME

EPA Science Inventory

This presentation will focus on historical changes in water quality in the Yaquina Estuary, Oregon, and factors which influence water quality within this estuary. Topics presented will include the importance of ocean conditions on water quality in the estuary; historical changes...

Flux of Total Mercury and Methylmercury to the Northern Gulf of Mexico from U.S. Estuaries.

PubMed

Buck, Clifton S; Hammerschmidt, Chad R; Bowman, Katlin L; Gill, Gary A; Landing, William M

2015-12-15

To better understand the source of elevated methylmercury (MeHg) concentrations in Gulf of Mexico (GOM) fish, we quantified fluxes of total Hg and MeHg from 11 rivers in the southeastern United States, including the 10 largest rivers discharging to the GOM. Filtered water and suspended particles were collected across estuarine salinity gradients in Spring and Fall 2012 to estimate fluxes from rivers to estuaries and from estuaries to coastal waters. Fluxes of total Hg and MeHg from rivers to estuaries varied as much as 100-fold among rivers. The Mississippi River accounted for 59% of the total Hg flux and 49% of the fluvial MeHg flux into GOM estuaries. While some estuaries were sources of Hg, the combined estimated fluxes of total Hg (~5200 mol y(-1)) and MeHg (~120 mol y(-1)) from the estuaries to the GOM were less than those from rivers to estuaries, suggesting an overall estuarine sink. Fluxes of total Hg from the estuaries to coastal waters of the northern GOM are approximately an order of magnitude less than from atmospheric deposition. However, fluxes from rivers are significant sources of MeHg to estuaries and coastal regions of the northern GOM.

Effects of environmental and water quality parameters on the functioning of copepod assemblages in tropical estuaries

NASA Astrophysics Data System (ADS)

Araujo, Adriana V.; Dias, Cristina O.; Bonecker, Sérgio L. C.

2017-07-01

We examined changes in the functioning of copepod assemblages with increasing pollution in estuaries, using sampling standardization of the salinity range to enable comparisons. Copepod assemblages were analyzed in four southeast Brazilian estuaries with different water quality levels and hydrodynamic characteristics over two years. We obtained mesozooplankton samples together with environmental and water quality parameters in the estuaries, every two months under predetermined salinities ranging from 15 to 25. The values of parameters, except species size, associated with the functioning of the copepod assemblages (biomass, productivity, and turnover rate) did not differ among estuaries. However, in the more polluted estuaries, the biomass and productivity of copepod assemblages of mesozooplankton were negatively correlated with concentration of pollution indicator parameters. Conversely, in the less polluted estuaries some degree of enrichment still seems to increase the system biomass and productivity, as these parameters were inversely related to indicators of improved water quality. The pollution level of estuaries distorted the relationship between temperature and the efficiency of converting energy to organic matter. In the less polluted estuaries, the relationship between turnover rate and temperature was over 70%, while in the most polluted estuaries, this relationship was only approximately 50%. Our results demonstrated that the functioning of assemblages in the estuaries was affected differently by increasing pollution depending on the water quality level of the system. Thus, investigating the functioning of assemblages can be a useful tool for the analysis of estuarine conditions.

Seasonal and interannual variability of mesozooplankton in two contrasting estuaries of the Bay of Biscay: Relationship to environmental factors

NASA Astrophysics Data System (ADS)

Villate, Fernando; Iriarte, Arantza; Uriarte, Ibon; Sanchez, Iraide

2017-12-01

Seasonal and interannual variations of total mesozooplankton abundance and community variability were assessed for the period 1998-2005 at 3 salinity sites (35, 33 and 30) of the estuaries of Bilbao and Urdaibai (southeast Bay of Biscay). Spatial differences in mesozooplankton seasonality were recognized, both within and between estuaries, related to differences between sites in hydrodynamic features and anthropogenic nutrient enrichment that drive phytoplankton biomass seasonal cycles. The within estuary seasonal differences in mesozooplankton community were mainly shown through seaward time-advances in the seasonal peak from summer to spring along the salinity gradient, linked to differences in phytoplankton availability during the summer, in turn, related to nutrient availability. These differences were most marked in the estuary of Urdaibai, where zooplankton seasonal pattern at 35 salinity (high tidal flushing) resembled that of shelf waters, while at 35 of the estuary of Bilbao zooplankton showed an estuarine seasonal pattern due to the influence of the estuarine plume. Cirripede larvae contributed most to the mesozooplankton seasonal variability, except at the outer estuary of Bilbao, where cladocerans and fish eggs and larvae were the major contributors, and the inner estuary of Urdaibai, where gastropod larvae contributed most. Total mesozooplankton increased at 30 salinity of the estuary of Bilbao and 35 salinity of the estuary of Urdaibai. Interannual variability of mesozooplankton at the lowest salinity of the estuary of Bilbao was mainly accounted for by copepods due to the introduction of non-indigenous species during estuarine rehabilitation from intense pollution. However, bivalve larvae and gastropod larvae showed the highest contributions at 35 salinity of the estuary of Urdaibai. At the rest of sites, the opposite interannual trends of polychaete larvae and hydromedusae generally made the highest contribution.

Carbon dioxide emissions from Indian monsoonal estuaries

NASA Astrophysics Data System (ADS)

Sarma Vedula, VSS

2012-07-01

The oceans act as a net sink for atmospheric CO2, however, the role of coastal bodies on global CO2 fluxes remains unclear due to lack of data. The estimated absorption of CO2 from the continental shelves, with limited data, is 0.22 to 1.0 PgC/y, and of CO2 emission by estuaries to the atmosphere is 0.27 PgC/y. The estimates from the estuaries suffer from large uncertainties due to large variability and lack of systematic data collection. It is especially true for Southeast Asian estuaries as the biogeochemical cycling of material are different due to high atmospheric temperature, seasonality driven by monsoons, seasonal discharge etc. In order to quantify CO2 emissions from the Indian estuaries, samples were collected at 27 estuaries all along the Indian coast during discharge wet and dry periods. The emissions of CO2 to the atmosphere from Indian estuaries were 4-5 times higher during wet than dry period. The pCO2 ranged between ~300 and 18492 microatm which were within the range of world estuaries. The mean pCO2 and particulate organic carbon (POC) showed positive relation with rate of discharge suggesting availability of high quantities of organic matter that led to enhanced microbial decomposition. The annual CO2 fluxes from the Indian estuaries, together with dry period data available in the literature, amounts to 1.92 TgC which is >10 times less than that from the European estuaries. The low CO2 fluxes from the Indian estuaries are attributed to low flushing rates and less human settlements along the banks of the Indian estuaries.

Heavy Metals (Cd, Cu, Cr, Pb and Zn) in Meretrix meretrix Roding, Water and Sediments from Estuaries in Sabah, North Borneo

ERIC Educational Resources Information Center

Abdullah, Mohd. Harun; Sidi, Jovita; Aris, Ahmad Zaharin

2007-01-01

Concentrations of heavy metals (Cd, Cu, Cr, Pb and Zn) in tissues of Meretrix meretrix Roding (M. meretrix R.), water and sediments from two estuaries were determined. One estuary is located in an urban area of Kota Kinabalu (Likas estuary) and the other in a rural district of Kota Belud (Kota Belud estuary), where both are in Sabah, North of…

Flushing Time

EPA Science Inventory

The flushing time of an estuary is generally defined as the turnover time of fresh water in the estuary, that is, the time required to replace the fresh water contained in the estuary with freshwater inflow. Thus, the flushing time of an estuary is the ratio of the volume of fres...

78 FR 9887 - Proposed Information Collection; Comment Request; National Estuaries Restoration Inventory

Federal Register 2010, 2011, 2012, 2013, 2014

2013-02-12

... Collection; Comment Request; National Estuaries Restoration Inventory AGENCY: National Oceanic and... for a revision and extension of a currently approved information collection. Collection of estuary... information) will be undertaken in order to populate a restoration project database mandated by the Estuary...

An historical perspective on eutrophication in the Pensacola Bay Estuary, FL, USA

EPA Science Inventory

In this chapter, we provide a brief description of the Pensacola Bay estuary, examining the available historical data for evidence of trends in eutrophication within the estuary. Common to many industrialized estuaries, Pensacola Bay has been subjected to unregulated point source...

Differences in the structure of copepod assemblages in four tropical estuaries: Importance of pollution and the estuary hydrodynamics.

PubMed

Araujo, Adriana V; Dias, Cristina O; Bonecker, Sérgio L C

2017-02-15

We examined the relationship between pollution and structure of copepod assemblages in estuaries, using sampling standardization of salinity range to reduce the effects of "Estuarine Quality Paradox". Copepod assemblages were analyzed in four Southeast Brazilian estuaries with different water quality levels and different hydrodynamic characteristics. The pollution negatively impacted the descriptors of the assemblage structure. The distribution of structure of copepod assemblages also showed a main separation trend between the most polluted estuaries and those less polluted. Temperature was the main factor affecting the assemblage structuring in the four estuaries. This factor acted in synergism with the effects of pollution impact and physical characteristics of the estuaries on the structure of copepod assemblages, supporting the potential vulnerability of coastal environments due to nutrient enrichment associated with climate change. Our study demonstrated the importance of sampling standardization of the salinity range in estuaries for reliable analysis of pollution effects on biota. Copyright © 2016 Elsevier Ltd. All rights reserved.

Comparison of common persistent organic pollutants (POPs) in flounder (Platichthys flesus) from the Vistula (Poland) and Douro (Portugal) River estuaries.

PubMed

Waszak, Ilona; Dabrowska, Henryka; Komar-Szymczak, Katarzyna

2014-04-15

Groups of flounder (Platichthys flesus) females were collected in 2011 from the Vistula River and the Duoro River estuaries and corresponding reference sites in the southern Baltic Sea and Portuguese coast of the Atlantic Ocean to measure and compare the levels and profiles of polychlorinated biphenyls (PCBs), organochlorine pesticides (OCPs), and polybrominated diphenyl ethers (PBDEs). The estuaries' sediments were also investigated. Several differences were found in the POPs between the estuaries and between the two marine regions, which were highlighted by PCA. The Vistula River estuary POPs, significantly higher than in the Douro River estuary, were dominated by DDTs followed by PCBs. PBDEs levels, indifferent between the estuaries, were relatively low. The POP levels in flounder and sediment evaluated against environmental assessment criteria (EACs) indicated that none of the measured contaminants for which EAC had been established exceeded the criterion, except for CB-118 in flounder from the Vistula River estuary. Copyright © 2014 Elsevier Ltd. All rights reserved.

CISDE Experiment: Nearshore-Estuarine Connectivity & Dispersion

NASA Astrophysics Data System (ADS)

Giddings, S. N.; Feddersen, F.; Harvey, M.; Gilroy, A. R.; Crooks, J.; McCullough, J.; Lorda, J.; Grimes, D. J.; Pawlak, G. R.

2016-02-01

As part of the CSIDE, Cross Surfzone/Inner-shelf Dye Exchange experiment, nearby shallow estuary measurements were made in addition to the surfzone and inner-shelf measurements, providing an integrated view into the estuary, surfzone, and shelf system. The CSIDE experiment was designed to look at the dispersion of dye as a proxy for dispersion of waterborne constituents such as pollutants, larvae, sediment, etc. along the coast and across the surfzone to a stratified inner-shelf. The Tijuana River Estuary, a shallow estuary with extensive intertidal regions and marsh, is sometimes the source of harmful contaminants that lead to beach closures in the CSIDE experiment region. However, at other times, the estuary may also act as a sink depending upon the freshwater conditions upstream. During this experiment, we installed temperature and salinity sensors, velocimeters, and fluorometers (measuring both turbidity and the dye concentration) in the two main arms of the Tijuana River Estuary to assess the connectivity between the surfzone and the estuary as well as the in-estuary dispersion.

Using occupancy modelling to compare environmental DNA to traditional field methods for regional-scale monitoring of an endangered aquatic species.

PubMed

Schmelzle, Molly C; Kinziger, Andrew P

2016-07-01

Environmental DNA (eDNA) monitoring approaches promise to greatly improve detection of rare, endangered and invasive species in comparison with traditional field approaches. Herein, eDNA approaches and traditional seining methods were applied at 29 research locations to compare method-specific estimates of detection and occupancy probabilities for endangered tidewater goby (Eucyclogobius newberryi). At each location, multiple paired seine hauls and water samples for eDNA analysis were taken, ranging from two to 23 samples per site, depending upon habitat size. Analysis using a multimethod occupancy modelling framework indicated that the probability of detection using eDNA was nearly double (0.74) the rate of detection for seining (0.39). The higher detection rates afforded by eDNA allowed determination of tidewater goby occupancy at two locations where they have not been previously detected and at one location considered to be locally extirpated. Additionally, eDNA concentration was positively related to tidewater goby catch per unit effort, suggesting eDNA could potentially be used as a proxy for local tidewater goby abundance. Compared to traditional field sampling, eDNA provided improved occupancy parameter estimates and can be applied to increase management efficiency across a broad spatial range and within a diversity of habitats. © 2015 John Wiley & Sons Ltd.

Modelling the spatial behaviour of a tropical tuna purse seine fleet.

PubMed

Davies, Tim K; Mees, Chris C; Milner-Gulland, E J

2014-01-01

Industrial tuna fisheries operate in the Indian, Atlantic and Pacific Oceans, but concerns over sustainability and environmental impacts of these fisheries have resulted in increased scrutiny of how they are managed. An important but often overlooked factor in the success or failure of tuna fisheries management is the behaviour of fishers and fishing fleets. Uncertainty in how a fishing fleet will respond to management or other influences can be reduced by anticipating fleet behaviour, although to date there has been little research directed at understanding and anticipating the human dimension of tuna fisheries. The aim of this study was to address gaps in knowledge of the behaviour of tuna fleets, using the Indian Ocean tropical tuna purse seine fishery as a case study. We use statistical modelling to examine the factors that influence the spatial behaviour of the purse seine fleet at broad spatiotemporal scales. This analysis reveals very high consistency between years in the use of seasonal fishing grounds by the fleet, as well as a forcing influence of biophysical ocean conditions on the distribution of fishing effort. These findings suggest strong inertia in the spatial behaviour of the fleet, which has important implications for predicting the response of the fleet to natural events or management measures (e.g., spatial closures).

Hydro-sedimentary processes of a shallow tropical estuary under Amazon influence. The Mahury Estuary, French Guiana

NASA Astrophysics Data System (ADS)

Orseau, Sylvain; Lesourd, Sandric; Huybrechts, Nicolas; Gardel, Antoine

2017-04-01

Along the Guianas coast, coastal dynamic is characterized by the migration of mud banks originating from the Amazon. This singular feature affects the dynamic and the morphology of local estuaries and can induce rapid bathymetric evolution in lower estuaries. Since 2012, the navigation channel of the Mahury Estuary (French Guiana) is enduring a severe siltation whose origin comes from a mud bank crossing the estuary mouth. This study aims to determine how the migration of a mud bank through an estuary mouth could influence the transport and fluxes in the estuary. Field measurements were performed over a year with the monitoring of the salt intrusion length, mooring surveys during spring-neap cycles and shipboard profiling surveys during semi-diurnal cycles. Salt intrusion lengths underline a significant seasonal variation characterized by the transition from a steady-state length during high river discharge and a wide range of lengths with the tidal range during low to moderate river discharge. During the rainy season, measurements indicate a fluvial-dominated condition with low suspended-sediment concentrations most of the semi-diurnal cycle. Residual sediment fluxes are usually seaward excepted when river discharge is below seasonal average. During the dry season, maximum suspended-sediment concentrations are higher in the middle part of the estuary. Residual sediment fluxes are landward along the estuary and stronger during neap tides in the estuary mouth and few kilometers upstream. In this area, a persistent density stratification traps sediments in the bottom layer and generates a gravitational circulation during neap tides, which enhances landward transports up to 2.56 t m-1 over a semi-diurnal cycle. In the middle estuary, landward fluxes are most significant during the dry season and also during the rainy season when the river discharge is below the seasonal average. Although this study includes temporal and spatial limitations, it underlines significant mud inflows in the middle part of the estuary during low to moderate river discharges. Comparison with old data suggests higher sediment loads in the estuary during the migration of a mud bank but must be confirmed by further studies during the interbank period.

The relationship between CDOM and salinity in estuaries: An analytical and graphical solution

NASA Astrophysics Data System (ADS)

Bowers, D. G.; Brett, H. L.

2008-09-01

The relationship between coloured dissolved organic matter (CDOM) and salinity in an estuary is explored using a simple box model in which the river discharge and concentration of CDOM in the river are allowed to vary with time. The results are presented as analytical and graphical solutions. The behaviour of the estuary depends upon the ratio, β, of the flushing time of the estuary to the timescale of the source variation. For small values of β, the variation in CDOM concentration in the estuary tracks that in the source, producing a linear relationship on a CDOM-salinity plot. As β increases, the estuary struggles to keep up with the changes in the source; and a curved CDOM-salinity plot results. For very large values of β, however, corresponding to estuaries with a long flushing time, the CDOM concentration in the estuary settles down to a mean value which again lies on a straight line on a CDOM-salinity plot (and extrapolates to the time-mean concentration in the source). The results are discussed in terms of the mapping of surface salinity in estuaries through the visible band remote sensing of CDOM.

Random versus fixed-site sampling when monitoring relative abundance of fishes in headwater streams of the upper Colorado River basin

USGS Publications Warehouse

Quist, M.C.; Gerow, K.G.; Bower, M.R.; Hubert, W.A.

2006-01-01

Native fishes of the upper Colorado River basin (UCRB) have declined in distribution and abundance due to habitat degradation and interactions with normative fishes. Consequently, monitoring populations of both native and nonnative fishes is important for conservation of native species. We used data collected from Muddy Creek, Wyoming (2003-2004), to compare sample size estimates using a random and a fixed-site sampling design to monitor changes in catch per unit effort (CPUE) of native bluehead suckers Catostomus discobolus, flannelmouth suckers C. latipinnis, roundtail chub Gila robusta, and speckled dace Rhinichthys osculus, as well as nonnative creek chub Semotilus atromaculatus and white suckers C. commersonii. When one-pass backpack electrofishing was used, detection of 10% or 25% changes in CPUE (fish/100 m) at 60% statistical power required 50-1,000 randomly sampled reaches among species regardless of sampling design. However, use of a fixed-site sampling design with 25-50 reaches greatly enhanced the ability to detect changes in CPUE. The addition of seining did not appreciably reduce required effort. When detection of 25-50% changes in CPUE of native and nonnative fishes is acceptable, we recommend establishment of 25-50 fixed reaches sampled by one-pass electrofishing in Muddy Creek. Because Muddy Creek has habitat and fish assemblages characteristic of other headwater streams in the UCRB, our results are likely to apply to many other streams in the basin. ?? Copyright by the American Fisheries Society 2006.

ECOLOGICAL CONDITION OF THE U.S. MID-ATLANTIC ESTUARIES: THE MID-ATLANTIC INTEGRATED ASSESSMENT (MAIA)

EPA Science Inventory

The Mid-Atlantic Integrated Assessment (MAIA-Estuaries) evaluated ecological conditions in US Mid-Atlantic estuaries during the summers of 1997 and 1998. Over 800 probability-based stations were monitored in four main estuarine systems?Chesapeake Bay, the Delaware Estuary, Maryla...

A Simple Model of Nitrogen Concentration, Throughput, and Denitrification in Estuaries

EPA Science Inventory

The Estuary Nitrogen Model (ENM) is a mass balance model that includes calculation of nitrogen losses within bays and estuaries using system flushing time. The model has been used to demonstrate the dependence of throughput and denitrification of nitrogen in bays and estuaries on...

Urban metabolism and river systems: an historical perspective - Paris and the Seine, 1790-1970

NASA Astrophysics Data System (ADS)

Barles, S.

2007-06-01

The aim of this paper is to analyse interaction between Paris and the Seine during the industrial era, 1790-1970, a period marked by strong population growth, changes in techniques, and the absence of specific legislation on environmental issues. The viewpoint focuses on exchanges of waters and wastes between city and river, quantifying them and tracing evolution in the light of the strategies implemented by the stakeholders in charge. The study combines industrial ecology, local history and the history of technology. From 1790 to 1850, waste matters, and especially excreta, were considered as raw materials, not refuse: they generated real profits. The removal of human excreta aimed not only at improving urban hygiene, but at producing the fertilizers needed in rural areas. Discharging them into the river was out of the question. But after the 1860s, several factors upset this exploitation, notably domestic water supply. Even so, Parisian engineers continued to process sewage using techniques that would not only ensure hygiene but also conciliate economic and agricultural interests. Both of these early periods are thus noteworthy for a relative limitation of the river's deterioration by urban wastes. Not until the 1920s, when domestic water supply had become the rule and excreta came to be considered as worthless waste, was the principle of valorisation abandoned. This led to important and long-lasting pollution of the Seine, aggravating the industrial pollution that had been in evidence since the 1840s. Analysing the priorities that led to the adoption of one principle or another in matters of urban hygiene and techniques, with the causes and consequences of such changes, enables us to understand the complex relations between Paris and the Seine. From raw material to waste matter, from river to drain, the concept of quality in environment remains the underlying theme.

Origin and Fate of Phosphorus In The Seine River Watershed

NASA Astrophysics Data System (ADS)

Némery, J.; Garnier, J.; Billen, G.; Meybeck, M.; Morel, C.

In the large man impacted river systems, like the Seine basin, phosphorus originates from both diffuse sources, i.e. runoff on agricultural soils and point sources generally well localised and quantified, i.e. industrial and domestic sewage. On the basis of our biogeochemical model of the Seine river ecological functioning (RIVERSTRAHLER: Billen et al., 1994; Garnier et al., 1995), a reduction of eutrophication and a better oxygenation of the larger streamorders could only be obtained by reducing P-point sources by 80 %. We are considering here P-sources, pathways and budgets through a nested approach from the Blaise sub-basin (600 km2, cattle breeding), the Grand Morin (1200 km, agricultural), the Marne (12 000 km, agricultural/urbanized) and the whole Seine catchment (65 000 km2, 17 M inhabitants). Particulate P mobility is also studied by the 32P isotopic exchange method developed in agronomy (Fardeau, 1993; Morel, 1995). The progressive reduction of polyphosphate content in washing powders and phosphorus retention in sewage treatment plants over the last ten years has led to a marked relative decrease of P point sources with regards to the diffuse ones, particularly for Paris megacity (10 M inhabitants). Major P inputs on the Marne basin are fertilizers (17 000 106 g P y-1) and 400 106 g P y-1 for treated wastewaters. Riverine output (900 106 g P y-1) is 1/3 associated to suspended matter (TSS) and is 2/3 as P-PO43-. Most fertilizer P is therefore retained on soils and exported in food supply. First results on P mobility show an important proportion of potentially remobilised P from TSS used for phytoplankton development (streamorder 5 to 8) and from deposited sediment used by macrophytes (streamorder 2 to 5). These kinetics of P exchange will improve the P sub-model in the whole basin ecological model.

Problématique de la prise en charge des cancers du sein au Sénégal: une approche transversale

PubMed Central

Gueye, Serigne Modou Kane; Gueye, Mamour; Coulbary, Sophie Aminata; Diouf, Alassane; Moreau, Jean Charles

2016-01-01

L’heure où les thérapeutiques innovantes se multiplient dans le cancer du sein, des pays moins nantis comme le Sénégal accusent encore un retard considérable dans la prise en charge globale de ce type de cancer. Au Sénégal, même si la prise en charge des cancers du sein avancés est actuellement bien codifiée, les résultats en terme de survie et de morbidités sont encore médiocres vu les retards diagnostiques et les traitements mutilants, parfois onéreux et mal tolérés, devenus nécessaires. Pour ces cancers avancés, les défis qui restent à relever résident dans l’érection de centres de soins palliatifs et le développement de la pluridisciplinarité pour améliorer la qualité de vie et l’accompagnement des malades. En revanche, pour les cancers infracliniques ou potentiellement guérissables, les défis restent immenses car il s’agira de les dépister, de bien les localiser et les diagnostiquer aussitôt (biopsie écho guidée ou stéréotaxique) mais également de les opérer de façon précise et entière (repérage – exérèse in sano et radiographie de pièce opératoire) tout en limitant les complications comme celles du curage classique (biopsie du ganglion sentinelle). Il s’agit là autant d’objectifs auxquels nos structures de santé ne sont pas toujours préparées. Cette mise au point est une analyse situationnelle sur les écueils contextuels qui grèvent encore la prise en charge globale des cancers du sein au Sénégal. PMID:28154696

Plant zonation in a tropical irregular estuary: can large occurrence zones be explained by a tradeoff model?

PubMed

Ribeiro, J P N; Matsumoto, R S; Takao, L K; Lima, M I S

2015-08-01

Estuaries present an environmental gradient that ranges from almost fresh water conditions to almost marine conditions. Salinity and flooding are the main abiotic drivers for plants. Therefore, plant zonation in estuaries is closely related to the tidal cycles. It is expected that the competitive abilities of plants would be inversely related to the tolerance toward environmental stress (tradeoff). Thus, in estuaries, plant zonation tends to be controlled by the environment near the sandbar and by competition away from it. This zonation pattern has been proposed for regular non-tropical estuaries. For tropical estuaries, the relative importance of rain is higher, and it is not clear to what extent this model can be extrapolated. We measured the tidal influence along the environmental gradient of a tropical irregular estuary and quantified the relative importance of the environment and the co-occurrence degree. Contrary to the narrow occurrence zone that would be expected for regular estuaries, plants presented large occurrence zones. However, the relative importance of the environment and competition followed the same patterns proposed for regular estuaries. The environmental conditions allow plants to occur in larger zones, but these zones arise from smaller and infrequent patches distributed across a larger area, and most species populations are concentrated in relatively narrow zones. Thus, we concluded that the zonation pattern in the Massaguaçu River estuary agrees with the tradeoff model.

Stable Isotope Identification of Nitrogen Sources for United States (U.S.) Pacific Coast Estuaries

NASA Astrophysics Data System (ADS)

Brown, C. A.; Kaldy, J. E.; Fong, P.; Fong, C.; Mochon Collura, T.; Clinton, P.

2016-02-01

Nutrients are the leading cause of water quality impairments in the United States, and as a result tools are needed to identify the sources of nutrients. We used natural abundance stable isotope data to evaluate nitrogen sources to U.S. west coast estuaries. We collected macroalgae and analyzed these samples for natural abundance of stable isotopes (δ15N) and supplemented this with available data from the literature for estuaries from Mexico to Alaska. Stable isotope ratios of green macroalgae were compared to δ15N of dissolved inorganic nitrogen of oceanic and watershed end members. There was a latitudinal gradient in δ15N of macroalgae with southern estuaries being 7 per mil heavier than northern estuaries. Gradients in isotope data were compared to nitrogen sources estimated by the USGS using the SPARROW model. In California estuaries, the elevation of isotope data appeared to be related to anthropogenic nitrogen sources. In Oregon systems, the nitrogen levels of streams flowing into the estuaries are related to forest cover, rather than to developed land classes. In Oregon estuaries, the δ15N of macroalgae suggested that the ocean and nitrogen-fixing trees in the watersheds were the dominant nitrogen sources with heavier sites located near the estuary mouth. In California estuaries, the gradient was reversed with heavier sites located upriver. In some Oregon estuaries, there was an elevation an elevation of δ15N above marine end members in the vicinity of wastewater treatment facility discharge locations, suggesting isotopes may be useful for distinguishing inputs along an estuarine gradient.

Temporal changes in physical, chemical and biological sediment parameters in a tropical estuary after mangrove deforestation

NASA Astrophysics Data System (ADS)

Ellegaard, Marianne; Nguyen, Ngoc Tuong Giang; Andersen, Thorbjørn Joest; Michelsen, Anders; Nguyen, Ngoc Lam; Doan, Nhu Hai; Kristensen, Erik; Weckström, Kaarina; Son, Tong Phuoc Hoang; Lund-Hansen, Lars Chresten

2014-04-01

Dated sediment cores taken near the head and mouth of a tropical estuary, Nha-Phu/Binh Cang, in south central Viet Nam were analyzed for changes over time in physical, chemical and biological proxies potentially influenced by removal of the mangrove forest lining the estuary. A time-series of satellite images was obtained, which showed that the depletion of the mangrove forest at the head of the estuary was relatively recent. Most of the area was converted into aquaculture ponds, mainly in the late 1990's. The sediment record showed a clear increase in sedimentation rate at the head of the estuary at the time of mangrove deforestation and a change in diatom assemblages in the core from the mouth of the estuary indicating an increase in the water column turbidity of the entire estuary at the time of the mangrove deforestation. The proportion of fine-grained sediment and the δ13C signal both increased with distance from the head of the estuary while the carbon content decreased. The nitrogen content and the δ15N signal were more or less constant throughout the estuary. The proportion of fine-grained material and the chemical proxies were more or less stable over time in the core from the mouth while they varied synchronously over time in the core from the head of the estuary. The sediment proxies combined show that mangrove deforestation had large effects on the estuary with regard to both the physical and chemical environment with implications for the biological functioning.

Activity of the mangrove snail Cerithidea decollata (Gastropoda: Potamididae) in a warm temperate South African estuary

NASA Astrophysics Data System (ADS)

Hodgson, Alan N.; Dickens, John

2012-08-01

A population of Cerithidea decollata, an intertidal marine gastropod usually found within mangroves, was studied within an area of Juncus kraussii in the upper reaches of the warm temperate Knysna estuary, which is at the southern-most limit of the recorded distribution of this snail. Activity (migratory and homing behaviour, distances travelled during foraging) of the snails was monitored over spring and neap tides in four seasons. Migratory patterns of the snails were affected by season, time of low tide (day vs night), tidal magnitude (spring vs neap) and zonation. In the summer and spring, a greater proportion of snails migrated from J. kraussii leaves onto the mud during the day at spring low tide. During neap tides in these two seasons, most snails did not climb J. kraussii leaves and remained on the mud, which was nearly always exposed. In autumn a few snails only were active and in winter snails were almost completely inactive, probably due to low air temperatures. Snails travelled greater distances on the mud on spring tides, during the diurnal low tides, and in the summer. No snails were found to home to individual J. kraussii leaves; however, homing behaviour was recorded to wooden poles within the Juncus wetland.

Widespread Micropollutant Monitoring in the Hudson River Estuary Reveals Spatiotemporal Micropollutant Clusters and Their Sources.

PubMed

Carpenter, Corey M G; Helbling, Damian E

2018-06-05

The objective of this study was to identify sources of micropollutants in the Hudson River Estuary (HRE). We collected 127 grab samples at 17 sites along the HRE over 2 years and screened for up to 200 micropollutants. We quantified 168 of the micropollutants in at least one of the samples. Atrazine, gabapentin, metolachlor, and sucralose were measured in every sample. We used data-driven unsupervised methods to cluster the micropollutants on the basis of their spatiotemporal occurrence and normalized-concentration patterns. Three major clusters of micropollutants were identified: ubiquitous and mixed-use (core micropollutants), sourced from sewage treatment plant outfalls (STP micropollutants), and derived from diffuse upstream sources (diffuse micropollutants). Each of these clusters was further refined into subclusters that were linked to specific sources on the basis of relationships identified through geospatial analysis of watershed features. Evaluation of cumulative loadings of each subcluster revealed that the Mohawk River and Rondout Creek are major contributors of most core micropollutants and STP micropollutants and the upper HRE is a major contributor of diffuse micropollutants. These data provide the first comprehensive evaluation of micropollutants in the HRE and define distinct spatiotemporal micropollutant clusters that are linked to sources and conserved across surface water systems around the world.

Productivity of functional guilds of fishes in managed wetlands in coastal South Carolina

USGS Publications Warehouse

Robinson, Kelly F.; Jennings, Cecil A.

2014-01-01

In coastal South Carolina, many wetlands are impounded and managed as migratory waterfowl habitat. Impoundment effects on fish production and habitat quality largely are unknown. We used the size-frequency method to estimate summer production of fish guilds in three impoundments along the Combahee River, South Carolina. We predicted that guild-specific production would vary with impoundment salinity, which ranged from 3 to 21 practical salinity units. We expected that marine species that use the estuary as nursery habitat would have greatest production in the impoundment with the highest salinity regime, and that species that inhabit the upper reaches of the estuary would have greatest production in the impoundment with the lowest salinity regime. Finally, we expected that estuarine species would be highly productive in all study impoundments, because these species can reproduce within these structures. We found that guild-specific productivity varied both among years and among impoundments, generally following salinity gradients, though to a lesser extent than expected. Our guild-specific estimates of fish productivity fell on the low end of the range of previously published estuarine fish production estimates. Additionally, we observed large mortality events in the study impoundments each summer. The results of our study indicate that during the summer, the study impoundments provided poor-quality fish habitat to all guilds.

Predicting stress in benthic communities of southeastern U.S. estuaries in relation to chemical contamination of sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hyland, J.L.; Dolah, R.F. van; Snoots, T.R.

1999-11-01

Matching data on sediment contaminants (metals, PAHs, PCBs) and macroinfaunal community structure from 231 subtidal stations in southeastern US estuaries were used to develop a framework for evaluating risks of benthic impacts from multiple-contaminant exposure. Sediment contamination was expressed as the mean ratio of individual contaminant concentrations relative to corresponding sediment quality guidelines, that is, to effects range-median (ERM) values, probable effects level (PEL) values, or an aggregate of the two. The probability of a degraded benthos was relatively low in samples with mean ERM quotients {le}0.020, PEL quotients {le}0.035, or combined ERM/PEL quotients {le}0.024. Only 5% of stations withinmore » these ranges had degraded benthic assemblages, while 95% had healthy assemblages. A higher probability of benthic impacts was observed in samples with mean ERM quotients >0.058, PEL quotients >0.096, or ERM/PEL quotients >0.077. Seventy-three to 78% of stations with values in these upper ranges had degraded benthic assemblages, while 22 to 27% had healthy assemblages. Only four stations (three with degraded, one with healthy assemblages) had mean ERM or PEL quotients >1.0, which is the beginning of the range associated with a high probability of mortality in short-term laboratory toxicity tests using amphipods.« less

PEER REVIEW OF PECONIC ESTUARY PROGRAM HYDRODYNAMIC AND WATER QUALITY (EUTROPHICATION) MODEL

EPA Science Inventory

The Peconic Estuary is located on the eastern end of Long Island, New York. Under the Federal Clean Water Act, the Peconic Estuary was named an "Estuary of National Significance" in 1992. Because of its high concentration of rare, threatened and endangered species and habitats,...

E-Estuary: Developing a Decision Support System for Coastal Management in the Conterminous United States (IAHR)

EPA Science Inventory

Ready access to geographic information is needed to support management decisions for estuaries at local, state, regional, and national scales. The U.S. Environmental Protection Agency (US EPA) is developing e-Estuary, a decision-support system for coastal management. E-Estuary ...

E-Estuary: Developing a Decision-support System for Coastal Management in the Counterminous Untied States (Coastal Geotools 09)

EPA Science Inventory

Ready access to geographic information is needed to support management decisions for estuaries at local, state, regional, and national scales. The U.S. Environmental Protection Agency (US EPA) is developing e-Estuary, a decision-support system for coastal management. E-Estuary ...

E-estuary: A Decision Support System for Coastal Water and Ecosystem Management in the US (CZ09)

EPA Science Inventory

Ready access to geographic information is needed to support management decisions for estuaries at local, state, regional, and national scales. The U.S. Environmental Protection Agency (US EPA) is developing e-Estuary, a decision-support system for coastal management. E-Estuary ...

SAN FRANCISCO ESTUARY PROJECT COMPREHENSIVE CONSERVATION AND MANAGEMENT PLAN

EPA Science Inventory

The Estuary, a significant natural resource, San Francisco Bay and the Delta combine to form the West Coast's largest estuary. The Estuary conveys the waters of the Sacramento and San Joaquin Rivers to the Pacific Ocean. It encompasses roughly 1,600 square miles, drains over 40 p...

PECONIC ESTUARY: AN INVENTORY OF SUBMERGED AQUATIC VEGETATION AND HARDENED SHORELINES FOR THE PECONIC ESTUARY, NEW YORK

EPA Science Inventory

Executive Summary The Peconic Estuary Program (PEP) is interested in the extent of eelgrass and other submerged aquatic vegetation and in documenting changes in the shorelines of the Peconic Estuary. The Suffolk County Department of Health Services' Office of Ecology provided fun...

The relative importance of oceanic nutrient inputs for Bass Harbor Marsh Estuary at Acadia National Park, Maine

USGS Publications Warehouse

Huntington, Thomas G.; Culbertson, Charles W.; Fuller, Christopher; Glibert, Patricia; Sturtevant, Luke

2014-01-01

The U.S. Geological Survey and Acadia National Park (ANP) collaborated on a study of nutrient inputs into Bass Harbor Marsh Estuary on Mount Desert Island, Maine, to better understand ongoing eutrophication, oceanic nutrient inputs, and potential management solutions. This report includes the estimation of loads of nitrate, ammonia, total dissolved nitrogen, and total dissolved phosphorus to the estuary derived from runoff within the watershed and oceanic inputs during summers 2011 and 2012. Nutrient outputs from the estuary were also monitored, and nutrient inputs in direct precipitation to the estuary were calculated. Specific conductance, water temperature, and turbidity were monitored at the estuary outlet. This report presents a first-order analysis of the potential effects of projected sea-level rise on the inundated area and estuary volume. Historical aerial photographs were used to investigate the possibility of widening of the estuary channel over time. The scope of this report also includes analysis of sediment cores collected from the estuary and fringing marsh surfaces to assess the sediment mass accumulation rate. Median concentrations of nitrate, ammonium, and total dissolved phosphorus on the flood tide were approximately 25 percent higher than on the ebb tide during the 2011 and 2012 summer seasons. Higher concentrations on the flood tide suggest net assimilation of these nutrients in biota within the estuary. The dissolved organic nitrogen fraction dominated the dissolved nitrogen fraction in all tributaries. The median concentration of dissolved organic nitrogen was about twice as high on the on the ebb tide than the flood tide, indicating net export of dissolved organic nitrogen from the estuary. The weekly total oceanic inputs of nitrate, ammonium, and total dissolved phosphorus to the estuary were usually much larger than inputs from runoff or direct precipitation. The estuary was a net sink for nitrate and ammonium in most weeks during both years. Oceanic inputs of nitrate and ammonium were an important source of inorganic nitrogen to the estuary in both years. In both years, the total seasonal inputs of ammonium to the estuary in flood tides were much larger than the inputs from watershed runoff or direct precipitation. In 2011, the total seasonal input of nitrate from flood tides to the estuary was more than twice as large the inputs from watershed runoff and precipitation, but in 2012, the inputs from flood tides were only marginally larger than the inputs from watershed runoff and precipitation. Turbidity was measured intermittently in 2012, and the pattern that emerged from the measurements indicated that the estuary was a source of particulate matter to the ocean rather than the ocean being a source to the estuary. From the nutrient budgets determined for the estuary it is evident that oceanic sources of nitrate and ammonium are an important part of the supply of nutrients that are contributing to the growth of macroalgae in the estuary. The relative importance of these oceanic nutrients compared with sources within the watershed typically increases as the summer progresses and runoff decreases. It is likely that rising sea levels, estimated by the National Oceanic and Atmospheric Administration to be 11 centimeters from 1950 through 2006 in nearby Bar Harbor, have resulted in an increase in oceanic inputs (tidal volume and nutrients derived from oceanic sources).

sources and processes identification for Zn cycling in the Seine river, France

NASA Astrophysics Data System (ADS)

gelabert, A.; Jouvin, D.; Morin, G.; Louvat, P.; Guinoiseau, D.; Benedetti, M. F.

2011-12-01

Because the availability of global freshwater stocks is predicted to become a major problem in a near future, new directives on water policy have been established in Europe. As a result, an accurate determination of the ecological status of the Seine river watershed is required. However, important evaluation limitation still exist, partly because the metal cycling in this system is not fully understood with for instance half the Seine river Zn not having clearly identified sources. Recent developments in isotopic measurements for new stable isotopes (Zn, Cu) allow many progresses in understanding the dynamics of metals in natural systems. But this technique alone does not always provide a precise distinction between mixing of water sources and biochemical processes able to induce isotopic fractionation. Along with an isotopic approach, this study propose to use XAS (X-ray Absorption Spectroscopy) to determine precisely the speciation of Zn complexes, and thus to define the proportion of water mixing vs. processes for Zn transfer in the watershed. A geographical sampling transect has been performed downstream Paris. Significant isotopic signature variations have been observed, varying from δ66Zn = 0.04 ± 0.04 to 0.18 ± 0.04 in the particulate part, and from δ66Zn= -0.28 ± 0.04 to 0.08 ± 0.04 for the dissolved part. The XAS analysis performed on the same samples at the Zn K-edge confirmed this heterogeneity by showing different speciations with a major contribution of sulfides, iron oxides and organic ligands. Interestingly, the wastewater treatment plant in Achères constitutes an important location in the system by contributing to the enrichment of heavy Zn to the Seine River particulate material. This change in isotopic signature follows a change in Zn speciation with decrease in sulfides contribution after Achères. A second important location is the confluence between the Seine and a minor river (Epte river) with a significant decrease in the δ66Zn for the particulate part. However, no major changes in Zn speciation have been observed. The cause for this isotopic decrease remains unclear but could be either 1) the mobilization of unknown sources, especially in this area (for the sampling point after the convergence) where the river is connected to numerous small lakes, or 2) the presence of biogeochemical processes able to induce a Zn isotopic fractionation. For instance, microorganisms present in freshwaters are known to be able to fractionate Zn during sorption processes, and they do not necessarily induce a change in the first shells of the Zn complexes if the sorbed metal was previously complexed with organic ligands in the river (fulvic substances with carboxylic or phenolic functional groups for instance). Although additional studies on the Seine river need to be conducted in order to reach a more complete understanding of this watershed functioning, these important results demonstrate the value of combining both the XAS and isotopic approaches in order to understand the behaviour of metals in such complex environments.

SENSITIVITY OF NITROGEN CONCENTRATIONS IN ESTUARIES TO LOADING AND WATER RESIDENCE TIME: APPLICATION TO THE POTOMAC ESTUARY

EPA Science Inventory

We use a simple nitrogen budget model to analyze concentrations of total nitrogen (TN) in estuaries for which both nitrogen inputs and water residence time are correlated with freshwater inflow rates. While the nitrogen concentration of an estuary varies linearly with TN loading ...

AN APPROACH TO DEVELOPING NUTRIENT CRITERIA FOR PACIFIC NORTHWEST ESTUARIES: A CASE STUDY OF YAQUINA ESTUARY, OREGON

EPA Science Inventory

NHEERL scientists have developed an approach that could be used by the State of Oregon for development of nutrient and other water quality criteria for the Yaquina Estuary, Oregon. The principle objective in setting protective criteria is to prevent future degradation of estuari...

33 CFR 165.1190 - Security Zone; San Francisco Bay, Oakland Estuary, Alameda, CA.

Code of Federal Regulations, 2011 CFR

2011-07-01

..., Oakland Estuary, Alameda, CA. 165.1190 Section 165.1190 Navigation and Navigable Waters COAST GUARD... § 165.1190 Security Zone; San Francisco Bay, Oakland Estuary, Alameda, CA. (a) Location. The following area is a security zone: All navigable waters of the Oakland Estuary, California, from the surface to...

33 CFR 165.1190 - Security Zone; San Francisco Bay, Oakland Estuary, Alameda, CA.

Code of Federal Regulations, 2013 CFR

2013-07-01

..., Oakland Estuary, Alameda, CA. 165.1190 Section 165.1190 Navigation and Navigable Waters COAST GUARD... § 165.1190 Security Zone; San Francisco Bay, Oakland Estuary, Alameda, CA. (a) Location. The following area is a security zone: All navigable waters of the Oakland Estuary, California, from the surface to...

The Estuary Guide. Level 3: High School. Draft.

ERIC Educational Resources Information Center

Alexander, Glen; And Others

Estuaries are marine systems that serve as nurseries for animals, links in the migratory pathways, and habitat for a complex community of organisms. This curriculum guide intended for use at the high school level seeks to teach what estuaries are; provide opportunities to practice decision-making that affects estuaries; and encourage students to…

33 CFR 165.1190 - Security Zone; San Francisco Bay, Oakland Estuary, Alameda, CA.

Code of Federal Regulations, 2010 CFR

2010-07-01

..., Oakland Estuary, Alameda, CA. 165.1190 Section 165.1190 Navigation and Navigable Waters COAST GUARD... § 165.1190 Security Zone; San Francisco Bay, Oakland Estuary, Alameda, CA. (a) Location. The following area is a security zone: All navigable waters of the Oakland Estuary, California, from the surface to...

33 CFR 165.1190 - Security Zone; San Francisco Bay, Oakland Estuary, Alameda, CA.

Code of Federal Regulations, 2012 CFR

2012-07-01

..., Oakland Estuary, Alameda, CA. 165.1190 Section 165.1190 Navigation and Navigable Waters COAST GUARD... § 165.1190 Security Zone; San Francisco Bay, Oakland Estuary, Alameda, CA. (a) Location. The following area is a security zone: All navigable waters of the Oakland Estuary, California, from the surface to...

33 CFR 165.1190 - Security Zone; San Francisco Bay, Oakland Estuary, Alameda, CA.

Code of Federal Regulations, 2014 CFR

2014-07-01

..., Oakland Estuary, Alameda, CA. 165.1190 Section 165.1190 Navigation and Navigable Waters COAST GUARD... § 165.1190 Security Zone; San Francisco Bay, Oakland Estuary, Alameda, CA. (a) Location. The following area is a security zone: All navigable waters of the Oakland Estuary, California, from the surface to...

Seasonal variation in denitrification and dissimilatory nitrate reduction to ammonia process rates and corresponding key functional genes along an estuarine nitrate gradient

PubMed Central

Smith, Cindy J.; Dong, Liang F.; Wilson, John; Stott, Andrew; Osborn, A. Mark; Nedwell, David B.

2015-01-01

This research investigated spatial-temporal variation in benthic bacterial community structure, rates of denitrification and dissimilatory nitrate reduction to ammonium (DNRA) processes and abundances of corresponding genes and transcripts at three sites—the estuary-head, mid-estuary and the estuary mouth (EM) along the nitrate gradient of the Colne estuary over an annual cycle. Denitrification rates declined down the estuary, while DNRA rates were higher at the estuary head and middle than the EM. In four out of the six 2-monthly time-points, rates of DNRA were greater than denitrification at each site. Abundance of gene markers for nitrate-reduction (nitrate reductase narG and napA), denitrification (nitrite reductase nirS) and DNRA (DNRA nitrite reductase nrfA) declined along the estuary with significant relationships between denitrification and nirS abundance, and DNRA and nrfA abundance. Spatially, rates of denitrification, DNRA and corresponding functional gene abundances decreased along the estuary. However, temporal correlations between rate processes and functional gene and transcript abundances were not observed. PMID:26082763

A review of land–sea coupling by groundwater discharge of nitrogen to New England estuaries: Mechanisms and effects

USGS Publications Warehouse

2007-01-01

Hydrologists have long been concerned with the interface of groundwater flow into estuaries, but not until the end of the last century did other disciplines realize the major role played by groundwater transport of nutrients to estuaries. Mass balance and stable isotopic data suggest that land-derived NO3, NH4, and dissolved organic N do enter estuaries in amounts likely to affect the function of the receiving ecosystem. Because of increasing human occupancy of the coastal zone, the nutrient loads borne by groundwater have increased in recent decades, in spite of substantial interception of nutrients within the land and aquifer components of watersheds. Groundwater-borne nutrient loads have increased the N content of receiving estuaries, increased phytoplankton and macroalgal production and biomass, decreased the area of seagrasses, and created a cascade of associated ecological changes. This linkage between land use and eutrophication of estuaries occurs in spite of mechanisms, including uptake of land-derived N by riparian vegetation and fringing wetlands, “unloading” by rapid water removal, and direct N inputs to estuaries, that tend to uncouple the effects of land use on receiving estuaries. It can be expected that as human activity on coastal watersheds continues to increase, the role of groundwater-borne nutrients to the receiving estuary will also increase.

Regional acidification trends in Florida shellfish estuaries: A 20+ year look at pH, oxygen, temperature, and salinity

USGS Publications Warehouse

Robbins, Lisa L.; Lisle, John T.

2018-01-01

Increasing global CO2 and local land use changes coupled with increased nutrient pollution are threatening estuaries worldwide. Local changes of estuarine chemistry have been documented, but regional associations and trends comparing multiple estuaries latitudinally have not been evaluated. Rapid climate change has impacted the annual and decadal chemical trends in estuaries, with local ecosystem processes enhancing or mitigating the responses. Here, we compare pH, dissolved oxygen, temperature, and salinity data from 10 Florida shellfish estuaries and hundreds of shellfish bed stations. Over 80,000 measurements, spanning from 1980 to 2008, taken on Atlantic Ocean and West Florida coast showed significant regional trends of consistent pH decreases in 8 out of the 10 estuaries, with an average rate of decrease on the Gulf of Mexico side estuaries of Florida of 7.3 × 10−4 pH units year−1, and average decrease on the Atlantic Coast estuaries of 5.0 × 10−4 pH units year−1. The rates are approximately 2–3.4 times slower than observed in pH decreases associated with ocean acidification in the Atlantic and Pacific. Other significant trends observed include decreasing dissolved oxygen in 9 out of the 10 estuaries, increasing salinity in 6 out of the 10, and temperature increases in 3 out of the 10 estuaries. The data provide a synoptic regional view of Florida estuary trends which reflect the complexity of changing climate and coastal ocean acidification superimposed on local conditions. These data provide context for understanding, and interpreting the past and predicting future of regional water quality health of shellfish and other organisms of commercial and ecological significance along Florida’s coasts.

Polycyclic aromatic hydrocarbons (PAHs) in water from three estuaries of China: Distribution, seasonal variations and ecological risk assessment.

PubMed

Yan, Jinxia; Liu, Jingling; Shi, Xuan; You, Xiaoguang; Cao, Zhiguo

2016-08-15

The distribution, seasonal variations and ecological risk assessment of polycyclic aromatic hydrocarbons (PAHs) in water from three estuaries in Hai River Basin of China, which has been suffering from different anthropogenic pressures, were investigated. In three estuaries, the average concentration of ΣPAHs was the lowest in Luan River estuary, followed by Hai River estuary, and the highest in Zhangweixin River estuary. There were significant seasonal variations in ΣPAHs, the concentrations of ΣPAHs were higher in November than in May and August. The composition profiles of PAHs in different sites were significantly different, and illustrated seasonal variations. Generally, 2-ring (Nap) and 3-ring PAHs (Acp, Fl and Phe) were the most abundant components at most sampling sites in three estuaries. The PAHs in three estuaries were mainly originated from pyrogenic sources. A method based on toxic equivalency factors (TEFs) and risk quotient (RQ) was proposed to assess the ecological risk of ΣPAHs, with the ecological risk of individual PAHs being considered separately. The results showed that the ecological risks caused by ΣPAHs were high in Hai River estuary and Zhangweixin River estuary, and moderate in Luan River estuary. The mean values of ecological risk in August were lower than those in November. The contributions of individual PAHs to ecological risk were different in May, August and November. 3-ring and 4-ring PAHs accounted for much more ecological risk than 2-ring, 5-ring and 6-ring, although the contributions of 5-ring and 6-ring to ecological risk were higher than these to PAHs concentrations. Copyright © 2016 Elsevier Ltd. All rights reserved.

Species Sorting of Benthic Invertebrates in a Salinity Gradient - Importance of Dispersal Limitation.

PubMed

Josefson, Alf B

2016-01-01

The relative importance of environment and dispersal related processes for community assembly has attracted great interest over recent decades, but few empirical studies from the marine/estuarine realm have examined the possible effects of these two types of factors in the same system. Importance of these processes was investigated in a hypothetical metacommunity of benthic invertebrates in 16 micro-tidal estuaries connected to the same open sea area. The estuaries differed in size and connectivity to the open sea and represented a salinity gradient across the estuaries. The Elements of Metacommunity Structure (EMS) approach on estuary scale was complemented with a mechanistic variance partitioning approach on sample scale to disentangle effects of factors affecting assembly of three trait groups of species with different dispersivity. A quasi-Clementsian pattern was observed for all three traits, a likely response to some latent gradient. The primary axis in the pattern was most strongly related to gradients in estuary salinity and estuary entrance width and correlation with richness indicated nestedness only in the matrix of the most dispersive trait group. In the variance partitioning approach measures of turnover and nestedness between paired samples each from different estuaries were related to environmental distance in different gradients. Distance between estuaries was unimportant suggesting importance of factors characterizing the estuaries. While the high dispersive species mainly were sorted in the salinity gradient, apparently according to their tolerance ranges towards salinity, the two less dispersive traits were additionally affected by estuary entrance width and possibly also area. The results exemplify a mechanism of community assembly in the marine realm where the niche factor salinity in conjunction with differential dispersal structure invertebrates in a metacommunity of connected estuaries, and support the idea that dispersive species are more controlled by the environment than less dispersive species.

Effects of mud supply on large-scale estuary morphology and development over centuries to millennia

NASA Astrophysics Data System (ADS)

Braat, Lisanne; van Kessel, Thijs; Leuven, Jasper R. F. W.; Kleinhans, Maarten G.

2017-10-01

Alluvial river estuaries consist largely of sand but are typically flanked by mudflats and salt marshes. The analogy with meandering rivers that are kept narrower than braided rivers by cohesive floodplain formation raises the question of how large-scale estuarine morphology and the late Holocene development of estuaries are affected by cohesive sediment. In this study we combine sand and mud transport processes and study their interaction effects on morphologically modelled estuaries on centennial to millennial timescales. The numerical modelling package Delft3D was applied in 2-DH starting from an idealised convergent estuary. The mixed sediment was modelled with an active layer and storage module with fluxes predicted by the Partheniades-Krone relations for mud and Engelund-Hansen for sand. The model was subjected to a range of idealised boundary conditions of tidal range, river discharge, waves and mud input. The model results show that mud is predominantly stored in mudflats on the side of the estuary. Marine mud supply only influences the mouth of the estuary, whereas fluvial mud is distributed along the whole estuary. Coastal waves stir up mud and remove the tendency to form muddy coastlines and the formation of mudflats in the downstream part of the estuary. Widening continues in estuaries with only sand, while mud supply leads to a narrower constant width and reduced channel and bar dynamics. This self-confinement eventually leads to a dynamic equilibrium in which lateral channel migration and mudflat expansion are balanced on average. However, for higher mud concentrations, higher discharge and low tidal amplitude, the estuary narrows and fills to become a tidal delta.

The relative influence of local and regional environmental drivers of algal biomass (chlorophyll-a) varies by estuarine location

NASA Astrophysics Data System (ADS)

Wainger, Lisa; Yu, Hao; Gazenski, Kim; Boynton, Walter

2016-09-01

A major question in restoring estuarine water quality is whether local actions to manage excess nutrients can be effective, given that estuaries are also responding to tidal inputs from adjacent water bodies. Several types of statistical analysis were used to examine spatially-detailed and long-term water quality monitoring data in eight sub-estuaries of Chesapeake Bay. These sub-estuaries are likely to be similar to other shallow systems with moderate to long water residence times. Statistical cluster analysis of spatial water quality data suggested that estuaries had spatially distinct water quality zones and that the peak algal biomass (as measured by chlorophyll-a) was most often controlled by local watershed inputs in all but one estuary, although mainstem inputs affected most estuaries at some times and places. An elasticity indicator that compared inter-annual changes in sub-estuaries to parallel changes in the mainstem Chesapeake Bay supported the idea that water quality in sub-estuaries was not strongly coupled to the mainstem. A cross-channel zonation of water quality observed near the mouth of estuaries suggested that Bay influences were stronger on the right side of the lower channel (looking up estuary) at times in all estuaries, and was most common in small estuaries closest to the mouth of the primary water source to the estuary. Where Bay influences were strong, estuarine water quality would be expected to be less responsive to nutrient reductions made in the local watershed. Regression analysis was used to evaluate hypothesized relationships between environmental driver variables and average chlorophyll-a (chl-a) concentrations. Chl-a values were calculated from unusually detailed levels of spatial sampling, potentially providing a more comprehensive view of system conditions than that provided by traditional sparse sampling networks. The univariate models with the best data support to explain variability in averaged chl-a concentration were those that reflected water residence time. Of the land cover variables tested, septic density in the riparian zone explained the most variance in chl-a. The multivariate models that most improved upon the residence time effect added TN or TP flows (normalized by volume) and suggested that chl-a will be less responsive to nutrient reductions in estuaries that are poorly flushed.

Spatial distribution of living (Rose Bengal stained) benthic foraminifera in the Loire estuary (western France)

NASA Astrophysics Data System (ADS)

Mojtahid, M.; Geslin, E.; Coynel, A.; Gorse, L.; Vella, C.; Davranche, A.; Zozzolo, L.; Blanchet, L.; Bénéteau, E.; Maillet, G.

2016-12-01

Ninety-seven surface sediment samples were collected in September 2012 from intertidal and subtidal areas along the Loire estuary (western France). The main objective of this work is to study the spatial distributional patterns of living benthic foraminifera and their link to the environmental parameters (distance to sea, elevation, grain size, total organic carbon, trace metals, sedimentary carbonates, and polycyclic aromatic hydrocarbons) in the Loire estuary. Foraminiferal analysis was also extended to the dead assemblages in thirty-three surface samples from the lower inner estuary. The highest absolute densities of living benthic foraminifera are found in the lower inner estuary within the polyhaline domain. This is attributed to the presence of mudflats with abundant food source, i.e. microphytobenthos. The low densities found in the outer estuary (euhaline domain) are attributed partly to the sandy nature of the sediments and the food source inhabiting this substrate. The near absence of foraminifera in the inner estuary (mesohaline and polyhaline domains) is inferred to the physical disturbance resulting from the regular dredging of the navigation channel. The living assemblages are dominated by three typical estuarine species: Ammonia tepida and Haynesina germanica in the intertidal mudflats of the lower inner estuary and Cribroelphidium excavatum in the sandy subtidal sediments of the lower inner and outer estuary. In the Loire estuary, H. germanica has an unusual intermediate geographical distribution along the estuary between A. tepida and C. excavatum while in most temperate estuaries this species is present upstream in the mesohaline domain. This is most likely the result of the regular dredging of the navigation channel damaging its natural habitat. This might be also the explanation for the total absence of agglutinated species usually dominating the oligohaline domain. The canonical correspondence analysis shows that elevation (and its link to time of emersion), distance to sea (and its correspondence with salinity), and organic carbon content appear to be the primary drivers of foraminiferal distribution. The present study provides for the first time ecological and distribution patterns of living benthic foraminiferal communities in the Loire estuary. This baseline knowledge is necessary for the future studies focusing on the use of benthic foraminifera as bio-indicators in the Loire estuary and in transitional environments in general.

The dependence of estuarine turbidity on tidal intrusion length, tidal range and residence time

USGS Publications Warehouse

Uncles, R.J.; Stephens, J.A.; Smith, R.E.

2002-01-01

It is shown that there is a marked tendency for long, strongly tidal estuaries to have greater suspended particulate matter (SPM) concentrations within their high-turbidity regions than shorter estuaries with comparable tidal ranges at their mouths, or weakly tidal estuaries. Using consistently derived data from 44 estuaries in Europe and the Americas, contours of the logarithm of maximum estuarine SPM concentration are shown to be reasonably smooth when plotted against the logarithm of mean spring tidal range (at the estuary mouth) and the logarithm of estuarine tidal length. Predictions from the plot are compared with published observations made in the Delaware, Scheldt, Rio de la Plata, Gironde, Bay of Fundy, Changjiang (Yangtze), Amazon, Paros Lagoon and the Hawkesbury Estuary and it is shown that, qualitatively, there are no serious discrepancies. Short, weakly tidal estuaries are predicted to have very low 'intrinsic' SPM concentrations. High SPM concentrations in these estuaries would most likely be the result of either locally generated wave resuspension, high freshwater sediment loads due to freshets, or intruding seawater carrying suspended sediments derived from wave activity in the coastal zone. Application of a generic tidal model demonstrates that longer estuaries possess faster tidal currents for a given tidal range at their mouth and, in the presence of a supply of erodable fine sediment, therefore (by implication) produce greater concentrations of SPM that can be accumulated within a turbidity maximum. The same is true if the tidal range is increased for estuaries of a given length. These features are illustrated by comparing surveys of SPM data from two large estuaries possessing greatly different tidal ranges (the microtidal, medium turbidity Potomac and the macrotidal, highly turbid Humber-Ouse) and a third, much smaller but strongly tidal estuary (the low-turbidity Tweed). It is demonstrated that longer estuaries tend to have longer flushing times for solutes than shorter systems and that larger tides tend to reduce flushing times, although the tidal influence is secondary. Short, rapidly flushed estuaries quickly lose their erodable fine sediment to the coastal zone during freshets and during the ebbing currents of spring tides. Turbidity is therefore small during low runoff, low wave activity conditions. Very long, very slowly flushed estuaries are unlikely to lose a significant fraction of their resuspended sediments during freshets or individual ebb tides and are therefore able to accumulate large and increasing amounts of fine sediment in the long-term. Turbidity within them is therefore high during the fast currents of large spring tides. ?? 2002 Elsevier Science Ltd. All rights reserved.

The dependence of estuarine turbidity on tidal intrusion length, tidal range and residence time

USGS Publications Warehouse

Uncles, R.J.; Stephens, J.A.; Smith, R.E.

2002-01-01

It is shown that there is a marked tendency for long, strongly tidal estuaries to have greater suspended particulate matter (SPM) concentrations within their high-turbidity regions than shorter estuaries with comparable tidal ranges at their mouths, or weakly tidal estuaries. Using consistently derived data from 44 estuaries in Europe and the Americas, contours of the logarithm of maximum estuarine SPM concentration are shown to be reasonably smooth when plotted against the logarithm of mean spring tidal range (at the estuary mouth) and the logarithm of estuarine tidal length. Predictions from the plot are compared with published observations made in the Delaware, Scheldt, Rio de la Plata, Gironde, Bay of Fundy, Changjiang (Yangtze), Amazon, Patos Lagoon and the Hawkesbury Estuary and it is shown that, qualitatively, there are no serious discrepancies. Short, weakly tidal estuaries are predicted to have very low ‘intrinsic’ SPM concentrations. High SPM concentrations in these estuaries would most likely be the result of either locally generated wave resuspension, high freshwater sediment loads due to freshets, or intruding seawater carrying suspended sediments derived from wave activity in the coastal zone. Application of a generic tidal model demonstrates that longer estuaries possess faster tidal currents for a given tidal range at their mouth and, in the presence of a supply of erodable fine sediment, therefore (by implication) produce greater concentrations of SPM that can be accumulated within a turbidity maximum. The same is true if the tidal range is increased for estuaries of a given length. These features are illustrated by comparing surveys of SPM data from two large estuaries possessing greatly different tidal ranges (the microtidal, medium turbidity Potomac and the macrotidal, highly turbid Humber-Ouse) and a third, much smaller but strongly tidal estuary (the low-turbidity Tweed). It is demonstrated that longer estuaries tend to have longer flushing times for solutes than shorter systems and that larger tides tend to reduce flushing times, although the tidal influence is secondary. Short, rapidly flushed estuaries quickly lose their erodable fine sediment to the coastal zone during freshets and during the ebbing currents of spring tides. Turbidity is therefore small during low runoff, low wave activity conditions. Very long, very slowly flushed estuaries are unlikely to lose a significant fraction of their resuspended sediments during freshets or individual ebb tides and are therefore able to accumulate large and increasing amounts of fine sediment in the long-term. Turbidity within them is therefore high during the fast currents of large spring tides.

A nitrogen budget of the Scheldt hydrographical basin

NASA Astrophysics Data System (ADS)

Billen, G.; Somville, M.; De Becker, E.; Servais, P.

A nitrogen budget including nitrite, nitrate, ammonium and organic nitrogen is presented for the western Scheldt estuary. The nitrogen entering the estuarine zone is evaluated from measurements of NO 2-, NO 3-, NH 4+ and organic nitrogen concentration at Rupelmonde. These results are part of 10 years survey (1973-1983) of water quality in the Scheldt estuary. The origin of this load in the Scheldt estuary is further investigated by the evaluation of the contribution of domestic, industrial sewages, agriculture and breeding in the nitrogenous load of the upper Scheldt drainage basin. Domestic load is evaluated from the watershed population. Industrial sewages are quantified by use of the evaluation of specific nitrogen spoilage by the various industries as a function of their number of workers. Nitrogen leaching of agricultural soils has been measured by determining the nitrogen concentration in small river draining agricultural areas, upstream any domestic or industrial discharges. Cattle-farming wastes are for the biggest part spread on soils. A fraction however is directly rejected in rivers. Denitrification in the tributaries of the Scheldt is important in the control of nitrate entering the estuarine zone. Its evaluation will be presented. In the estuarine part of the Scheldt (Rupelmonde-Vlissingen), the nitrogenous load is important due to the upstream load and to the sewages of the Antwerp district. These sewages (domestic, industrial, agricultural) have been evaluated as described above for the upper Scheldt basin. The important load carried at that moment by the Scheldt gives rise to an important bacterial activity which results in anaerobic conditions. Denitrification then takes place. This process reduces NO 3- to N 2O and N 2, i.e. eliminates a substantial fraction of the nitrate load in the Scheldt. The importance of this process will be quantified both by measurement of in situ denitrifying activities and by analysis of NO 2- + NO 3- profiles in the river. When reoxidation of the water occurs by reaeration and mixing with well aerated seawater, the total mineral nitrogen has a conservative behaviour as indicated by the (straight) linear relationships between Σ N min and chlorinity, in spite of the primary production, bacterial activities and sediment influence. This conservative behaviour of Σ N min is used in this work for evaluating N min exportation by the Scheldt to the North Sea. The straight line relation extrapolated at low salinity gives a "fictive nitrogen concentration" in fresh water. The product of this "fictive concentration" and the upstream discharge gives an accurate evaluation of the exportation flux of mineral nitrogen to the sea. This work shows the predominant role of denitrification in tributaries of the drainage basin and in the estuary itself as a nitrogen sink which reduces the amount of nitrogen exported by the Scheldt to the North Sea. It is suggested that the pursuit of the present waste water treatment policy, only based on the elimination of the organic load without any tertiary treatment, could result in increasing the nitrogen output into the Belgian-Dutch coastal zones by a factor 2-3.

76 FR 70480 - Otay River Estuary Restoration Project, South San Diego Bay Unit of the San Diego Bay National...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-14

... River Estuary Restoration Project, South San Diego Bay Unit of the San Diego Bay National Wildlife...), intend to prepare an environmental impact statement (EIS) for the proposed Otay River Estuary Restoration... any one of the following methods. Email: [email protected] . Please include ``Otay Estuary NOI'' in the...

78 FR 68995 - Safety Zone: Vessel Removal From the Oakland Estuary, Alameda, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2013-11-18

...-AA00 Safety Zone: Vessel Removal From the Oakland Estuary, Alameda, CA AGENCY: Coast Guard, DHS. ACTION... waters of the Oakland Estuary just north of the Park Street Bridge in Alameda, CA in support of the Oakland Estuary Closure for the Vessel Removal Project on November 4, 2013 through November 22, 2013. This...

Measuring the contribution of benthic ecosystem engineering species to the ecosystem services of an estuary: A case study of burrowing shrimps in Yaquina Estuary, Oregon

EPA Science Inventory

Burrowing shrimps are regarded as ecosystem engineering species in many coastal ecosystems worldwide, including numerous estuaries of the west coast of North America (Baja California to British Columbia). In estuaries of the U.S. Pacific Northwest, two species of large burrowing...

Carbon dynamics and CO2 and CH4 outgassing in the Mekong delta

NASA Astrophysics Data System (ADS)

Borges, Alberto V.; Abril, Gwenaël; Bouillon, Steven

2018-02-01

We report a data set of biogeochemical variables related to carbon cycling obtained in the three branches (Mỹ Tho, Hàm Luông, Cố Chiên) of the Mekong delta (Bến Tre province, Vietnam) in December 2003, April 2004, and October 2004. Both the inner estuary (upstream of the mouth) and the outer estuary (river plume) were sampled, as well as side channels. The values of the partial pressure of CO2 (pCO2) ranged between 232 and 4085 ppm, O2 saturation level (%O2) between 63 and 114 %, and CH4 between 2 and 2217 nmol L-1, within the ranges of values previously reported in temperate and tropical meso- and macro-tidal estuaries. Strong seasonal variations were observed. In the upper oligohaline estuary, low pCO2 (479-753 ppm) and high %O2 (98-106 %) values were observed in April 2004 most probably related to freshwater phytoplankton growth owing to low freshwater discharge (1400 m3 s-1) and increase in water residence time; during the two other sampling periods with a higher freshwater discharge (9300-17 900 m3 s-1), higher pCO2 (1895-2664 ppm) and lower %O2 (69-84 %) values were observed in the oligohaline part of the estuary. In October 2004, important phytoplankton growth occurred in the offshore part of the river plume as attested by changes in the contribution of particulate organic carbon (POC) to total suspended matter (TSM) (%POC) and the stable isotope composition of POC (δ13C-POC), possibly related to low TSM values (improvement of light conditions for phytoplankton development), leading to low pCO2 (232 ppm) and high %O2 (114 %) values. Water in the side channels in the Mekong delta was strongly impacted by inputs from the extensive shrimp farming ponds. The values of pCO2, CH4, %O2, and the stable isotope composition of dissolved inorganic carbon (δ13C-DIC) indicated intense organic matter degradation that was partly mediated by sulfate reduction in sediments, as revealed by the slope of total alkalinity (TA) and DIC covariations. The δ13C-POC variations also indicated intense phytoplankton growth in the side channels, presumably due to nutrient enrichment related to the shrimp farming ponds. A data set in the mangrove creeks of the Ca Mau province (part of the Mekong delta) was also acquired in April and October 2004. These data extended the range of variability in pCO2 and %O2 with more extreme values than in the Mekong delta (Bến Tre), with maxima and minima of 6912 ppm and 37 %, respectively. Similarly, the maximum CH4 concentration (686 nmol L-1) was higher in the Ca Mau province mangrove creeks than in the Mekong delta (Bến Tre, maximum 222 nmol L-1) during the October 2004 cruise (rainy season and high freshwater discharge period). In April 2004 (dry season and low freshwater discharge period), the CH4 values were much lower than in October 2004 (average 19 ± 13 and 210 ± 158 nmol L-1, respectively) in the Ca Mau province mangrove creeks, owing to the higher salinity (average 33.2 ± 0.6 and 14.1 ± 1.2, respectively) that probably led to higher sediment sulfate reduction, leading to inhibition of sediment methanogenesis and higher anaerobic CH4 oxidation. In the inner estuarine region (three branches of the Mekong delta), CO2 emissions to the atmosphere averaged 121 mmol m-2 d-1, and the CH4 emissions averaged 118 µmol m-2 d-1. The CO2 emission to the atmosphere from the Mekong inner estuary was higher than reported in the Yangtze and Pearl river inner estuaries. This was probably due to the lower salinity in the Mekong delta branches, possibly due to different morphology: relatively linear channels in the Mekong delta versus funnel-shaped estuaries for the Yangtze and Pearl river inner estuaries.

Climate Ready Estuaries

EPA Pesticide Factsheets

Information on climate change impacts to different estuary regions, tools and resources to monitor changes, and information to help managers develop adaptation plans for risk management of estuaries and coastal communities.

On Mellitella stokesii and Amphipholis geminata (Echinodermata), from an intertidal flat in the upper Gulf of Nicoya estuary, Pacific, Costa Rica.

PubMed

Vargas, José A; Solano, Sylvia

2011-03-01

Information on changes over time in the biodiversity and ecology of tropical systems is of increasing importance against the background of local, regional, and global dynamics. This study aimed to contribute with long-term data on the abundance fluctuations of two species of echinoderms from a tropical tidal flat. From February 1984 to December 1986, March 1985 to April 1987, and July 1994 to September 1996 (total: 76 dates), core samples (17.7 cm2, 15 cm deep) were collected at low tide at a mud-sand flat in the mid upper Gulf of Nicoya estuary, Costa Rica, as part of a survey of the benthic community. Among more than 100 taxa, the burrowing brittle star, Amphipholis geminata, and the sand dollar, Mellitella stokesii, consistently appeared in the samples over the study period. A total of 63 M. stokesii and 149 A. geminata were collected. The 43 sand dollars found during 1984-1985, give an approximate density of 35 ind./m2, which is within the range reported for this species. M. stokesii was almost absent from 1994 to 1996, while A. geminata had its peak of abundance at the end of 1995. Low abundances of the sand dollar during the rainy seasons (May-November) and slight increments in dry seasons (December-April) cores, also agrees with a report from the region. A. geminata also presented an irregular pattern of abundance, with slight increases at the end of the rainy seasons or during the dry seasons, when higher salinities are more suitable for echinoderms. The patchy spatial distribution of both species makes difficult the detection of patterns with a corer. Nevertheless, this information is unique due to its extensive time coverage and provides a baseline for future surveys designed specifically for the study of tropical intertidal estuarine echinoderms.

Geological Evidence for the Destruction of Shinmachi, Hawaii, by the 1946 Aleutian and 1960 Chile Tsunamis?

NASA Astrophysics Data System (ADS)

Chague-Goff, C.; Goto, K.; Goff, J. R.; Gadd, P.; Dudley, W. C.; Sugawara, D.; Nakamura, N.

2016-12-01

Around 1900, Japanese workers brought to Big Island, Hawaii, to work on the sugar plantations, established the Shinmachi (`New Town') community on low-lying land on Hilo's waterfront. Although Shinmachi was obliterated by the 1946 Aleutian tsunami, it was rebuilt, only to be totally destroyed again by the 1960 Chile tsunami. Shinmachi was never rebuilt and the site is now part of the Wailoa State Park. Short cores were collected throughout the park in an attempt to recover the geological evidence of these two tsunamis. Two anomalous layers, a lower sand (Unit 1) and an upper fining upward fine sand to silt (Unit 2) intercalated within soil and peat and exhibiting sharp lower and upper contacts, were recorded at only a few locations, probably reflecting, at least partly, the effect of anthropogenic disturbance and a limited amount of accommodation space on recent Holocene lava flows. One core was analysed by ITRAX core scanner equipped with a magnetic susceptibility (MS) meter. Unit 1 exhibits high MS associated with high Fe, Mn and Rb counts, but low Si and K counts, reflecting the volcanic composition of the material, and probably an older flooding event from the river. Unit 2 on the other hand is characterised by a different suite of elements, including Si, K, Ti, Mn, Fe, Ca, Sr, Zr and As. These most likely represent the mineralogical and chemical composition of shallow marine sediments from Hilo Bay and/or brackish sediments from Wailoa River estuary. High concentrations of As in particular have previously been reported in sediments from Hilo Bay and Wailoa River estuary and attributed to the release of arsenic trioxide by a canec manufacturing plant between 1932-1963. In this study, As was absent below Unit 2, and can thus be used as chronological control. Unit 2 therefore most likely represents the 1946 tsunami deposit. There was no clear evidence for the 1960 tsunami, probably reflecting the limited amount of accommodation space in the area.

Assessment of bridge scour in the lower, middle, and upper Yangtze River estuary with riverbed sonar profiling techniques.

PubMed

Zheng, Shuwei; Xu, Y Jun; Cheng, Heqin; Wang, Bo; Lu, Xuejun

2017-12-12

Riverbed scour of bridge piers can cause rapid loss in foundation strength, leading to sudden bridge collapse. This study used multi-beam echo sounders (Seabat 7125) to map riverbed surrounding the foundations of four major bridges in the lower, middle, and upper reaches of the 700-km Yangtze River Estuary (YRE) during June 2015 and September 2016. The high-resolution data were utilized to analyze the morphology of the bridge scour and the deformation of the wide-area riverbed (i.e., 5-18 km long and 1.3-8.3 km wide). In addition, previous bathymetric measurements collected in 1998, 2009, and 2013 were used to determine riverbed erosion and deposition at the bridge reaches. Our study shows that the scour depth surrounding the bridge foundations progressed up to 4.4-19.0 m in the YRE. Over the past 5-15 years, the total channel erosion in some river reaches was up to 15-17 m, possessing a threat to the bridge safety in the YRE. Tide cycles seemed to have resulted in significant variation in the scour morphology in the lower and middle YRE. In the lower YRE, the riverbed morphology displayed one long erosional ditch on both sides of the bridge foundations and a long-strip siltation area distributed upstream and downstream of the bridge foundations; in the middle YRE, the riverbed morphology only showed erosional morphology surrounding the bridge foundations. Large dunes caused deep cuts and steeper contours in the bridge scour. Furthermore, this study demonstrates that the high-resolution grid model formed by point cloud data of multi-beam echo sounders can clearly display the morphology of the bridge scour in terms of wide areas and that the sonar technique is a very useful tool in the assessment of bridge scours.

Characterizing seston in the Penobscot River Estuary.

PubMed

Meseck, Shannon L; Li, Yaqin; Sunila, Inke; Dixon, Mark; Clark, Paul; Lipsky, Christine; Stevens, Justin R; Music, Paul; Wikfors, Gary H

2017-10-01

The Penobscot River Estuary is an important system for diadromous fish in the Northeast United States of American (USA), in part because it is home to the largest remnant population of Atlantic salmon, Salmo salar, in the country. Little is known about the chemical and biological characteristics of seston in the Penobscot River Estuary. This study used estuarine transects to characterize the seston during the spring when river discharge is high and diadromous fish migration peaks in the Penobscot River Estuary. To characterize the seston, samples were taken in spring 2015 for phytoplankton identification, total suspended matter (TSM), percent organic TSM, chlorophyll a, particle size (2 μm-180 μm), particulate carbon and nitrogen concentrations, and stable carbon and nitrogen isotopes. The estuarine profiles indicate that TSM behaved non-conservatively with a net gain in the estuary. As phytoplankton constituted only 1/1000 of the particles, the non-conservative behavior of TSM observed in the estuary was most likely not attributable to phytoplankton. Particulate carbon and nitrogen ratios and stable isotope signals indicate a strong terrestrial, allochthonous signal. The seston in the Penobscot River Estuary was dominated by non-detrital particles. During a short, two-week time period, Heterosigma akashiwo, a phytoplankton species toxic to finfish, also was detected in the estuary. A limited number of fish samples, taken after the 2015 Penobscot River Estuary bloom of H. akashiwo, indicated frequent pathological gill damage. The composition of seston, along with ichthyotoxic algae, suggest the need for further research into possible effects upon resident and migratory fish in the Penobscot River Estuary. Published by Elsevier Ltd.

Circulation and physical processes within the San Gabriel River Estuary during summer 2005

USGS Publications Warehouse

Rosenberger, Kurt J.; Xu, Jingping; Stein, Eric D.; Noble, Marlene A.; Gartner, Anne L.

2007-01-01

The Southern California Coastal Water Research Project (SCCWRP) is developing a hydrodynamic model of the SGR estuary, which is part of the comprehensive water-quality model of the SGR estuary and watershed investigated by SCCWRP and other local agencies. The hydrodynamic model will help understanding of 1) the exchange processes between the estuary and coastal ocean; 2) the circulation patterns in the estuary; 3) upstream natural runoff and the cooling discharge from PGS. Like all models, the SGR hydrodynamic model is only useful after it is fully calibrated and validated. In May 2005, SCCWRP requested the assistance of the U.S. geological Survey (USGS) Coastal and Marine Geology team (CMG) in collecting data on the hydrodynamic conditions in the estuary during the summer dry season. The summer was chosen for field data collection as this was assumed to be the season with the greatest potential for chronic degraded water quality due to low river flow and high thermal stratification within the estuary (due to both higher average air temperature and PGS output). Water quality can be degraded in winter as well, when higher river discharge events bring large volumes of water from the Los Angeles basin into the estuary. The objectives of this project were to 1) collect hydrodynamic data along the SGR estuary; 2) study exchange processes within the estuary through analysis of the hydrodynamic data; and 3) provide field data for model calibration and validation. As the data only exist for the summer season, the results herein only apply to summer conditions.

Developmental toxicity of PAH mixtures in fish early life stages. Part I: adverse effects in rainbow trout.

PubMed

Le Bihanic, Florane; Morin, Bénédicte; Cousin, Xavier; Le Menach, Karyn; Budzinski, Hélène; Cachot, Jérôme

2014-12-01

A new gravel-contact assay using rainbow trout, Oncorhynchus mykiss, embryos was developed to assess the toxicity of polycyclic aromatic hydrocarbons (PAHs) and other hydrophobic compounds. Environmentally realistic exposure conditions were mimicked with a direct exposure of eyed rainbow trout embryos incubated onto chemical-spiked gravels until hatching at 10 °C. Several endpoints were recorded including survival, hatching delay, hatching success, biometry, developmental abnormalities, and DNA damage (comet and micronucleus assays). This bioassay was firstly tested with two model PAHs, fluoranthene and benzo[a]pyrene. Then, the method was applied to compare the toxicity of three PAH complex mixtures characterized by different PAH compositions: a pyrolytic extract from a PAH-contaminated sediment (Seine estuary, France) and two petrogenic extracts from Arabian Light and Erika oils, at two environmental concentrations, 3 and 10 μg g(-1) sum of PAHs. The degree and spectrum of toxicity were different according to the extract considered. Acute effects including embryo mortality and decreased hatching success were observed only for Erika oil extract. Arabian Light and pyrolytic extracts induced mainly sublethal effects including reduced larvae size and hemorrhages. Arabian Light and Erika extracts both induced repairable DNA damage as revealed by the comet assay versus the micronucleus assay. The concentration and proportion of methylphenanthrenes and methylanthracenes appeared to drive the toxicity of the three PAH fractions tested, featuring a toxic gradient as follows: pyrolytic < Arabian Light < Erika. The minimal concentration causing developmental defects was as low as 0.7 μg g(-1) sum of PAHs, indicating the high sensitivity of the assay and validating its use for toxicity assessment of particle-bound pollutants.

Recent Salmon Declines: A Result of Lost Feeding Opportunities Due to Bad Timing?

PubMed Central

Chittenden, Cedar M.; Jensen, Jenny L. A.; Ewart, David; Anderson, Shannon; Balfry, Shannon; Downey, Elan; Eaves, Alexandra; Saksida, Sonja; Smith, Brian; Vincent, Stephen; Welch, David; McKinley, R. Scott

2010-01-01

As the timing of spring productivity blooms in near-shore areas advances due to warming trends in global climate, the selection pressures on out-migrating salmon smolts are shifting. Species and stocks that leave natal streams earlier may be favoured over later-migrating fish. The low post-release survival of hatchery fish during recent years may be in part due to static release times that do not take the timing of plankton blooms into account. This study examined the effects of release time on the migratory behaviour and survival of wild and hatchery-reared coho salmon (Oncorhynchus kisutch) using acoustic and coded-wire telemetry. Plankton monitoring and near-shore seining were also conducted to determine which habitat and food sources were favoured. Acoustic tags (n = 140) and coded-wire tags (n = 266,692) were implanted into coho salmon smolts at the Seymour and Quinsam Rivers, in British Columbia, Canada. Differences between wild and hatchery fish, and early and late releases were examined during the entire lifecycle. Physiological sampling was also carried out on 30 fish from each release group. The smolt-to-adult survival of coho salmon released during periods of high marine productivity was 1.5- to 3-fold greater than those released both before and after, and the fish's degree of smoltification affected their downstream migration time and duration of stay in the estuary. Therefore, hatchery managers should consider having smolts fully developed and ready for release during the peak of the near-shore plankton blooms. Monitoring chlorophyll a levels and water temperature early in the spring could provide a forecast of the timing of these blooms, giving hatcheries time to adjust their release schedule. PMID:20805978

Do different degrees of human activity affect the diet of Brazilian silverside Atherinella brasiliensis?

PubMed

Alves, V E N; Patrício, J; Dolbeth, M; Pessanha, A; Palma, A R T; Dantas, E W; Vendel, A L

2016-08-01

The aim of the present study was to test whether different degrees of human activity affect the diet of the Brazilian silverside Atherinella brasiliensis in two tropical estuaries. Fish were collected along the salinity gradient of two Brazilian estuaries, the heavily impacted Paraiba Estuary and the less impacted Mamanguape Estuary, in the dry and wet seasons. The findings confirm that A. brasiliensis has generalist feeding habits and is able to change its diet under different environmental conditions. The results indicate clear spatial (i.e. along the estuarine gradient) changes in diet composition in both estuaries, but diet was also influenced by the degree of anthropogenic disturbance. During the wet season in the nutrient enriched Paraiba Estuary, when human activity was higher, the diet of A. brasiliensis was poorer and dominated by few dietary items, reflecting the potential impoverishment of prey items in this heavily disturbed system. The specimens collected in the most affected estuary also had a greater frequency of micro-plastics and parasites in their stomachs, reflecting the greater degree of human disturbance in the estuary. The present findings suggest that the diet of A. brasiliensis could be a useful indicator of changes in the ecological quality of these and other tropical estuaries of the western Atlantic Ocean. © 2016 The Fisheries Society of the British Isles.

Isolation and connectivity: Relationships between periodic connection to the ocean and environmental variables in intermittently closed estuaries

NASA Astrophysics Data System (ADS)

Lill, Adrian Wilfred Thomas; Schallenberg, Marc; Lal, Aparna; Savage, Candida; Closs, Gerard Patrick

2013-08-01

Morphometric and physicochemical variables are key determinants of biotic community structure in estuaries and are influenced by changes to estuary mouth state (open/closed). This study examined and compared the consequences of intermittent connection to the ocean on environmental gradients among estuaries; specifically, how estuary morphology and hydrology relate to physical connection to the sea, and the influence of this relationship on the physicochemical environment. By sampling 20 estuaries across New Zealand and using historical aerial photographs, a continuous index of estuarine connection to the ocean was developed and independently validated using berm elevation derived from Airborne Laser Scanning (ALS) data. Using published literature, this index was compared to equivalent indices in South Africa and Australia. A clear relationship between connections to the ocean, freshwater flow and productivity indices underlie the environmental differences between permanently open and intermittently closed estuaries. Consistent patterns across the Southern Hemisphere, albeit with regional variations in estuarine characteristics, suggest that remote sensing is useful for predicting the physicochemical environment of small estuaries across regions. Principal components analysis for Otago estuaries showed that 40% of measured variation in the environment could be attributed to the gradient of relative connectivity (EOI), or isolation (berm elevation) to the ocean. Evaluating these relationships is central to understanding how global and local environmental changes may affect estuarine connectivity regimes and, ultimately, the functioning of estuarine ecosystems.

Simple processes drive unpredictable differences in estuarine fish assemblages: Baselines for understanding site-specific ecological and anthropogenic impacts

NASA Astrophysics Data System (ADS)

Sheaves, Marcus

2016-03-01

Predicting patterns of abundance and composition of biotic assemblages is essential to our understanding of key ecological processes, and our ability to monitor, evaluate and manage assemblages and ecosystems. Fish assemblages often vary from estuary to estuary in apparently unpredictable ways, making it challenging to develop a general understanding of the processes that determine assemblage composition. This makes it problematic to transfer understanding from one estuary situation to another and therefore difficult to assemble effective management plans or to assess the impacts of natural and anthropogenic disturbance. Although system-to-system variability is a common property of ecological systems, rather than being random it is the product of complex interactions of multiple causes and effects at a variety of spatial and temporal scales. I investigate the drivers of differences in estuary fish assemblages, to develop a simple model explaining the diversity and complexity of observed estuary-to-estuary differences, and explore its implications for management and conservation. The model attributes apparently unpredictable differences in fish assemblage composition from estuary to estuary to the interaction of species-specific, life history-specific and scale-specific processes. In explaining innate faunal differences among estuaries without the need to invoke complex ecological or anthropogenic drivers, the model provides a baseline against which the effects of additional natural and anthropogenic factors can be evaluated.

Evolution of mid-Atlantic coastal and back-barrier estuary environments in response to a hurricane: Implications for barrier-estuary connectivity

USGS Publications Warehouse

Miselis, Jennifer L.; Andrews, Brian D.; Nicholson, Robert S.; Defne, Zafer; Ganju, Neil K.; Navoy, Anthony S.

2016-01-01

Assessments of coupled barrier island-estuary storm response are rare. Hurricane Sandy made landfall during an investigation in Barnegat Bay-Little Egg Harbor estuary that included water quality monitoring, geomorphologic characterization, and numerical modeling; this provided an opportunity to characterize the storm response of the barrier island-estuary system. Barrier island morphologic response was characterized by significant changes in shoreline position, dune elevation, and beach volume; morphologic changes within the estuary were less dramatic with a net gain of only 200,000 m3 of sediment. When observed, estuarine deposition was adjacent to the back-barrier shoreline or collocated with maximum estuary depths. Estuarine sedimentologic changes correlated well with bed shear stresses derived from numerically simulated storm conditions, suggesting that change is linked to winnowing from elevated storm-related wave-current interactions rather than deposition. Rapid storm-related changes in estuarine water level, turbidity, and salinity were coincident with minima in island and estuarine widths, which may have influenced the location of two barrier island breaches. Barrier-estuary connectivity, or the transport of sediment from barrier island to estuary, was influenced by barrier island land use and width. Coupled assessments like this one provide critical information about storm-related coastal and estuarine sediment transport that may not be evident from investigations that consider only one component of the coastal system.

Learning Lessons from Estuaries

ERIC Educational Resources Information Center

Schnittka, Christine

2006-01-01

There is something that draws all people to the sea and especially to the fertile estuaries that nuzzle up to its shores. An estuary serves as both a nursery and a grave for sea creatures. If life evolved from some primordial sea, it may well have been an estuary--a place where ocean and rivers meet and fresh and salty waters mingle in the…

78 FR 1246 - Otay River Estuary Restoration Project; South San Diego Bay Unit and Sweetwater Marsh Unit of the...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-01-08

...-FF08RSDC00] Otay River Estuary Restoration Project; South San Diego Bay Unit and Sweetwater Marsh Unit of the... scoping with regard to the environmental impact statement (EIS) for the proposed Otay River Estuary... one of the following methods. Email: [email protected] . Please include ``Otay Estuary NOI'' in the...

The Estuary Book: A Guide to Promoting Understanding and Regional Management of Maine's Estuaries and Embayments.

ERIC Educational Resources Information Center

Ruffing, Jenny

The objective of this document is to provide information about estuaries, the impact of uses on the environmental health of an estuary, and what communities and concerned individuals can do to manage and protect their local estuarine resources successfully. Much of the information presented here pertains to other embayments along the Maine coast…

Measuring the contribution of benthic ecosystem engineering species to the ecosystem services of an estuary: A case study of burrowing shrimps in Yaquina Estuary, Oregon - April 2009

EPA Science Inventory

Burrowing shrimps are regarded as ecosystem engineering species in many coastal ecosystems worldwide, including numerous estuaries of the west coast of North America (Baja California to British Columbia). In estuaries of the U.S. Pacific Northwest, two species of large burrowing...

Estuary Data Mapper: A Stand-Alone Tool for Geospatial Data Access, Visualization and Download for Estuaries and Coastal Watersheds of the United States

EPA Science Inventory

The US EPA Estuary Data Mapper (EDM; http://badger.epa.gov/rsig/edm/index.html) has been designed as a free stand-alone tool for geospatial data discovery, visualization, and data download for estuaries and their associated watersheds in the conterminous United States. EDM requi...

Estuary Data Mapper: A Stand-Alone Tool for Geospatial Data Access, Visualization and Download for Estuaries and Coastal Watersheds of the United States. (UNH)

EPA Science Inventory

The US EPA Estuary Data Mapper (EDM; http://badger.epa.gov/rsig/edm/index.html) has been designed as a free stand-alone tool for geospatial data discovery, visualization, and data download for estuaries and their associated watersheds in the conterminous United States. EDM requi...

Utilising monitoring and modelling of estuarine environments to investigate catchment conditions responsible for stratification events in a typically well-mixed urbanised estuary

NASA Astrophysics Data System (ADS)

Lee, Serena B.; Birch, Gavin F.

2012-10-01

Estuarine health is affected by contamination from stormwater, particularly in highly-urbanised environments. For systems where catchment monitoring is insufficient, novel techniques must be employed to determine the impact of urban runoff on receiving water bodies. In the present work, estuarine monitoring and modelling were successfully employed to determine stormwater runoff volumes and establish an appropriate rainfall/runoff relationship capable of replicating fresh-water discharge due to the full range of precipitation conditions in the Sydney Estuary, Australia. Using estuary response to determine relationships between catchment rainfall and runoff is a widely applicable method and may be of assistance in the study of waterways where monitoring fluvial discharges is not practical or is beyond the capacity of management authorities. For the Sydney Estuary, the SCS-CN method replicated rainfall/runoff and was applied in numerical modelling experiments investigating the hydrodynamic characteristics affecting stratification and estuary recovery following high precipitation. Numerical modelling showed stratification in the Sydney Estuary was dominated by fresh-water discharge. Spring tides and up-estuary winds contributed to mixing and neap tides and down-estuary winds enhanced stratification.

What multi-beam bathymetric data can tell about morphodynamics and sediment transport in an estuarine environment?

NASA Astrophysics Data System (ADS)

Winterscheid, Axel; Reiß, Marcel

2017-04-01

The Elbe River Estuary is one of the most important waterways for commercial shipping in Europe. It connects the North Sea with the Port of Hamburg located about 100 km inlands. To secure navigation, the Federal Waterways and Shipping Administration (WSV) is operating a fleet of survey vessels all equipped with a multi-beam echo sounder controlling the required water depths. Beyond navigational purposes, this monitoring is creating a comprehensive and ever-growing data base, which can be used for a consistent morphodynamical description of the river bed. The history of multi-beam records in the Elbe River Estuary reaches back to 2008. At particular river sections where large amounts of fine grained sediments accumulate surveys are taken biweekly; at other sections there are monthly surveys. Locally, sedimentation rates of up to 12 cm per day have been observed within the fairway. The time series of multiple multi-beam records have been analyzed with a particular focus on morphodynamics and sedimentation rates. Here we compare the morphodynamical characteristics of two river sections. The first section is located at the downstream end of the estuarine turbidity zone near the city of Cuxhaven; the second section is located 50 km away at the upstream end of the turbidity zone near the city of Hamburg. These two sections have been selected because in both the morphology of the river bed and the sedimentation processes are strongly influenced by the presence of fine grained sediments. The results show that changing sedimentation rates in both sections are conditioned by different site specific factors, e.g. the dynamic shifting of the turbidity zone along the estuary, which is resulting in a temporarily higher availability of suspended sediments and more intense sedimentation rates in the upper part of the estuary and the respective section. In contrast, in the downstream located river section more intense sedimentation rates could be related to periods of strong north-western wind conditions causing increased water levels and higher wave loads on the adjacent wadden areas of the German Bight. These processes were formerly inferred from theory and numerical studies but could not so far be supported on the basis of direct measurements due to a lack of continuous data records on sedimentation rates with a sufficiently high spatial and temporal resolution.

Optical properties of size fractions of suspended particulate matter in littoral waters of Québec

NASA Astrophysics Data System (ADS)

Mohammadpour, Gholamreza; Gagné, Jean-Pierre; Larouche, Pierre; Montes-Hugo, Martin A.

2017-11-01

Mass-specific absorption (ai∗(λ)) and scattering (bi∗(λ)) coefficients were derived for four size fractions (i = 0.2-0.4, 0.4-0.7, 0.7-10, and > 10 µm, λ = wavelength in nm) of suspended particulate matter (SPM) and with samples obtained from surface waters (i.e., 0-2 m depth) of the Saint Lawrence Estuary and Saguenay Fjord (SLE-SF) during June of 2013. For the visible-near-infrared spectral range (i.e., λ = 400-710 nm), mass-specific absorption coefficients of total SPM (i.e., particulates > 0.2 µm) (hereafter aSPM∗) had low values (e.g., < 0.01 m2 g-1 at λ = 440 nm) in areas of the lower estuary dominated by particle assemblages with relatively large mean grain size and high particulate organic carbon and chlorophyll a per unit of mass of SPM. Conversely, largest aSPM∗ values (i.e., > 0.05 m2 g-1 at λ = 440 nm) corresponded with locations of the upper estuary and SF where particulates were mineral-rich and/or their mean diameter was relatively small. The variability of two optical proxies (the spectral slope of particulate beam attenuation coefficient and the mass-specific particulate absorption coefficient, hereafter γ and Svis, respectively) with respect to changes in particle size distribution (PSD) and chemical composition was also examined. The slope of the PSD was correlated with bi∗(550) (Spearman rank correlation coefficient ρs up to 0.37) and ai∗(440) estimates (ρs up to 0.32) in a comparable way. Conversely, the contribution of particulate inorganic matter to total mass of SPM (FSPMPIM) had a stronger correlation with ai∗ coefficients at a wavelength of 440 nm (ρs up to 0.50). The magnitude of γ was positively related to FSPMi or the contribution of size fraction i to the total mass of SPM (ρs up to 0.53 for i = 0.2-0.4 µm). Also, the relation between γ and FSPMPIM variability was secondary (ρs = -0.34, P > 0.05). Lastly, the magnitude of Svis was inversely correlated with aSPM∗(440) (ρs = -0.55, P = 0.04) and FSPMPIM (ρs = -0.62, P = 0.018) in sampling locations with a larger marine influence (i.e., lower estuary).

Functional diversity of fish communities in two tropical estuaries subjected to anthropogenic disturbance.

PubMed

Dolbeth, M; Vendel, A L; Pessanha, A; Patrício, J

2016-11-15

The functional diversity of fish communities was studied along the salinity gradient of two estuaries in Northeast Brazil subjected to different anthropogenic pressures, to gain a better understanding of the response of fish communities to disturbance. We evaluated functional complementarity indices, redundancy and analysed functional composition through functional groups based on combinations of different traits. The fish communities in both estuaries share similar functions performed by few functional groups. The upstream areas had generally lower taxonomic, functional diversity and lower redundancy, suggesting greater vulnerability to impacts caused by human activities. Biomass was slightly more evenly distributed among functional groups in the less disturbed estuary, but total biomass and redundancy were lower in comparison to the urbanized estuary. The present findings lend strength to the notion that the less disturbed estuary may be more susceptible to anthropogenic impacts, underscoring the need for more effective conservation measures directed at this estuary. Copyright © 2016 Elsevier Ltd. All rights reserved.

How Phytoplankton Membranes Cope With Steep Ionic Strength (Salinity) Gradient?

NASA Astrophysics Data System (ADS)

Gasparovic, B.; Sesar, T.; Cankovic, M.; Ljubešić, Z.; Hrustić, E.; Zhu, Z.; Zhang, R.; Du, J.

2016-02-01

We report on phytoplankton accommodation on stressful conditions being steep ionic strength, i.e. salinity, changes, the conditions regularly found in the estuaries. We aimed defining how lipid composition of phytoplankton membrane structure is accommodated to prevent spontaneous osmosis. Salinity-dependent lipid profiles for particulate lipid extracts from blooming periods of the two opposing estuaries: eutrophic and polluted Wenchang River Estuary and pristine oligotrophic/mesotrophic Krka River Estuary were characterized by thin layer chromatography (TLC). The composition of phytoplankton pigments which was analyzed by high performance liquid chromatography. Domination of pigment Fucoxanthin in both estuaries indicates diatoms were major blooming group. While total particulate lipid concentration was almost an order of magnitude higher in the Wenchang River estuary (on average 238 µg/L) than in the Krka River Estuary (on average 36 µg/L), the lipid composition was similar. This implies that salinity stress is the main influential factor on phytoplankton lipid composition rather than availability of nutrients. Details on the lipid composition that follow salinity changes will be discussed.

Plastic pollution in five urban estuaries of KwaZulu-Natal, South Africa.

PubMed

Naidoo, Trishan; Glassom, David; Smit, Albertus J

2015-12-15

Monitoring plastic concentrations in estuaries is vital in assessing the magnitude of terrestrial inputs to oceanic environments. Data on plastics ≤ 5 mm in estuaries are scant. This study determined microplastic levels within five estuaries along the Durban coastline and on intervening beaches. Plastics were isolated from estuarine sediment, beach sediment and the surface water of each estuary and characterised. Sediment at the Bayhead area of Durban harbour had the highest average plastic concentrations (745.4 ± 129.7 particles per 500 ml) and an attenuating concentration trend away from the city centre was found. Prevailing south to north longshore drift was hypothesised to result in plastic accumulation on the northern shores of beaches with estuarine effluents, however, this was not found. Fragments composed the largest percent of plastics (59%) found in Bayhead, whereas fibres dominated other estuaries with proportions ranging from 38% of total plastics in the uMgeni estuary to 66% in the Mdloti. Copyright © 2015 Elsevier Ltd. All rights reserved.

Sampling epifauna, a necessity for a better assessment of benthic ecosystem functioning: an example of the epibenthic aggregated species Ophiothrix fragilis from the Bay of Seine.

PubMed

Lozach, Sophie; Dauvin, Jean-Claude; Méar, Yann; Murat, Anne; Davoult, Dominique; Migné, Aline

2011-12-01

Sampling the sea bottom surface remains difficult because of the surface hydraulic shock due to water flowing through the gear (i.e., the bow wave effect) and the loss of epifauna organisms due to the gear's closing mechanism. Slow-moving mobile epifauna, such as the ophiuroid Ophiothrix fragilis, form high-density patches in the English Channel, not only on pebbles like in the Dover Strait or offshore Brittany but also on gravel in the Bay of Seine (>5000 ind m(-2)). Such populations form high biomasses and control the water transfer from the water column to the sediment. Estimating their real density and biomass is essential for the assessment of benthic ecosystem functioning using trophic web modelling. In this paper, we present and discuss the patch patterns and sampling efficiency of the different methods for collecting in the dense beds of O. fragilis in the Bay of Seine. The large Hamon grab (0.25 m(-2)) highly under-estimated the ophiuroid density, while the Smith McIntyre appeared adequate among the tested sampling grabs. Nowadays, diving sampling, underwater photography and videos with remote operated vehicle appear to be the recommended alternatives to estimate the real density of such dense slow-moving mobile epifauna. Copyright © 2011 Elsevier Ltd. All rights reserved.

Localising the nitrogen imprint of the Paris food supply: the potential of organic farming and changes in human diet

NASA Astrophysics Data System (ADS)

Billen, G.; Garnier, J.; Thieu, V.; Silvestre, M.; Barles, S.; Chatzimpiros, P.

2011-11-01

The Seine watershed has long been the food-supplying hinterland of Paris, providing most of the animal and vegetal protein consumed in the city. Nowadays, because of the land specialisation of agriculture made possible by the shift from manure-based to synthetic nitrogen fertilisation, the Seine watershed, although it exports 80% of its huge cereal production, still provides most of the cereal consumed by the Paris agglomeration. The meat and milk supply originate, however, mainly from regions in the North and West of France, specialised in animal farming and importing about 30% of their feed from South America. As it works today, this system is responsible for a severe nitrate contamination of surface groundwater resources. Herein two scenarios of re-localising Paris's food supply are explored, based on organic farming and local provision of animal feed. We show that for the Seine watershed it is technically possible to design an agricultural system able to provide all the plant- and animal-based food required by the population, to deliver sub-root water meeting the drinking water standards and still to export a significant proportion of its production to areas less suitable for cereal cultivation. Decreasing the share of animal products in the human diet has a strong impact on the nitrogen imprint of urban food supply.

Localising the nitrogen imprint of the Paris food supply: the potential of organic farming and changes in human diet

NASA Astrophysics Data System (ADS)

Billen, G.; Garnier, J.; Thieu, V.; Silvestre, M.; Barles, S.; Chatzimpiros, P.

2012-01-01

The Seine watershed has long been the food-supplying hinterland of Paris, providing most of the animal and vegetal protein consumed in the city. Nowadays, the shift from manure-based to synthetic nitrogen fertilisation, has made possible a strong land specialisation of agriculture in the Seine watershed: it still provides most of the cereal consumed by the Paris agglomeration, but exports 80% of its huge cereal production. On the other hand the meat and milk supply originates mainly from regions in the North and West of France, specialised in animal farming and importing about 30% of their feed from South America. As it works today, this system is responsible for a severe nitrate contamination of surface and groundwater resources. Herein two scenarios of re-localising Paris's food supply are explored, based on organic farming and local provision of animal feed. We show that for the Seine watershed it is technically possible to design an agricultural system able to provide all the plant- and animal-based food required by the population, to deliver sub-root water meeting the drinking water standards and still to export a significant proportion of its production to areas less suitable for cereal cultivation. Decreasing the share of animal products in the human diet has a strong impact on the nitrogen imprint of urban food supply.

Estuary Data Mapper (EDM)

EPA Pesticide Factsheets

Estuary Data Mapper is a tool for geospatial data discovery, visualization, and data download for any of the approximately 2,000 estuaries and associated watersheds in along the five US coastal regions

About Estuary Data Mapper (EDM)

EPA Pesticide Factsheets

Estuary Data Mapper is a tool for geospatial data discovery, visualization, and data download for any of the approximately 2,000 estuaries and associated watersheds in along the five US coastal regions.

Country-wide assessment of estuary health: An approach for integrating pressures and ecosystem response in a data limited environment

NASA Astrophysics Data System (ADS)

Van Niekerk, L.; Adams, J. B.; Bate, G. C.; Forbes, A. T.; Forbes, N. T.; Huizinga, P.; Lamberth, S. J.; MacKay, C. F.; Petersen, C.; Taljaard, S.; Weerts, S. P.; Whitfield, A. K.; Wooldridge, T. H.

2013-09-01

Population and development pressures increase the need for proactive strategic management on a regional or country-wide scale - reactively protecting ecosystems on an estuary-by-estuary basis against multiple pressures is 'resource hungry' and not feasible. Proactive management requires a strategic assessment of health so that the most suitable return on investment can be made. A country-wide assessment of the nearly 300 functional South African estuaries examined both key pressures (freshwater inflow modification, water quality, artificial breaching of temporarily open/closed systems, habitat modification and exploitation of living resources) and health state. The method used to assess the type and level of the different pressures, as well as the ecological health status of a large number of estuaries in a data limited environment is described in this paper. Key pressures and the ecological condition of estuaries on a national scale are summarised. The template may also be used to provide guidance to coastal researchers attempting to inform management in other developing countries. The assessment was primarily aimed at decision makers both inside and outside the biodiversity sector. A key starting point was to delineate spatially the estuary functional zone (area) for every system. In addition, available data on pressures impacting estuaries on a national scale were collated. A desktop national health assessment, based on an Estuarine Health Index developed for South African ecological water requirement studies, was then applied systematically. National experts, all familiar with the index evaluated the estuaries in their region. Individual estuarine health assessment scores were then translated into health categories that reflect the overall status of South Africa's estuaries. The results showed that estuaries in the warm-temperate biogeographical zone are healthier than those in the cool-temperate and subtropical zones, largely reflecting the country's demographics and developmental pressures. A major finding was that, while a large number of South Africa's estuaries are still in an excellent to good condition, they tend to represent very small systems (<150 ha in size) in rural areas with few pressures. Larger systems, which are more important as nursery grounds because of their size, and also of higher economic and ecological importance, are in a fair to poor condition. This was due to pressures within the catchments influencing these downstream systems, and degradation as a result of direct development within the estuary functional zone.

40 CFR 35.9060 - Maximum Federal share.

Code of Federal Regulations, 2011 CFR

2011-07-01

... STATE AND LOCAL ASSISTANCE Financial Assistance for the National Estuary Program § 35.9060 Maximum... development of a comprehensive conservation and management plan for the estuary as specified in the estuary...

40 CFR 35.9060 - Maximum Federal share.

Code of Federal Regulations, 2013 CFR

2013-07-01

... STATE AND LOCAL ASSISTANCE Financial Assistance for the National Estuary Program § 35.9060 Maximum... development of a comprehensive conservation and management plan for the estuary as specified in the estuary...

40 CFR 35.9060 - Maximum Federal share.

Code of Federal Regulations, 2010 CFR

2010-07-01

... STATE AND LOCAL ASSISTANCE Financial Assistance for the National Estuary Program § 35.9060 Maximum... development of a comprehensive conservation and management plan for the estuary as specified in the estuary...

40 CFR 35.9060 - Maximum Federal share.

Code of Federal Regulations, 2012 CFR

2012-07-01

... STATE AND LOCAL ASSISTANCE Financial Assistance for the National Estuary Program § 35.9060 Maximum... development of a comprehensive conservation and management plan for the estuary as specified in the estuary...

40 CFR 35.9060 - Maximum Federal share.

Code of Federal Regulations, 2014 CFR

2014-07-01

... STATE AND LOCAL ASSISTANCE Financial Assistance for the National Estuary Program § 35.9060 Maximum... development of a comprehensive conservation and management plan for the estuary as specified in the estuary...