Method and apparatus for the separation of a gas-solids mixture in a circulating fluidized bed reactor

DOEpatents

Vimalchand, Pannalal; Liu, Guohai; Peng, WanWang

2010-08-10

The system of the present invention includes a centripetal cyclone for separating particulate material from a particulate laden gas solids stream. The cyclone includes a housing defining a conduit extending between an upstream inlet and a downstream outlet. In operation, when a particulate laden gas-solids stream passes through the upstream housing inlet, the particulate laden gas-solids stream is directed through the conduit and at least a portion of the solids in the particulate laden gas-solids stream are subjected to a centripetal force within the conduit.

On the interplay of gas dynamics and the electromagnetic field in an atmospheric Ar/H2 microwave plasma torch

NASA Astrophysics Data System (ADS)

Synek, Petr; Obrusník, Adam; Hübner, Simon; Nijdam, Sander; Zajíčková, Lenka

2015-04-01

A complementary simulation and experimental study of an atmospheric pressure microwave torch operating in pure argon or argon/hydrogen mixtures is presented. The modelling part describes a numerical model coupling the gas dynamics and mixing to the electromagnetic field simulations. Since the numerical model is not fully self-consistent and requires the electron density as an input, quite extensive spatially resolved Stark broadening measurements were performed for various gas compositions and input powers. In addition, the experimental part includes Rayleigh scattering measurements, which are used for the validation of the model. The paper comments on the changes in the gas temperature and hydrogen dissociation with the gas composition and input power, showing in particular that the dependence on the gas composition is relatively strong and non-monotonic. In addition, the work provides interesting insight into the plasma sustainment mechanism by showing that the power absorption profile in the plasma has two distinct maxima: one at the nozzle tip and one further upstream.

Occurrence and concentrations of selected trace elements and halogenated organic compounds in stream sediments and potential sources of polychlorinated biphenyls, Leon Creek, San Antonio, Texas, 2012–14

USGS Publications Warehouse

Wilson, Jennifer T.

2016-06-23

Sediment samples collected from Leon Creek by the USGS during 2007–9 and 2012–14 at a total of eight sites following identical field and laboratory methods were evaluated to determine if potential PCB sources could be identified. Total PCB concentrations in the sediment samples collected upstream from the Joint Base site were low or nondetections; while concentrations in the samples collected on and downstream from the Joint Base site were greater. Congeners 180 and 138 constituted the greatest proportion of the PCB mixture in samples collected upstream from, on, and downstream from the Joint Base site. Upstream from the Joint Base site, congeners 180 and 138 constituted 50 percent and 35 percent respectively of the PCBs congeners found in the samples. On and downstream from the Joint Base site, congeners 180 and 138 constituted 80 percent and 13 percent respectively of the PCBs congeners found in the samples. Chi-square (C2) tests also indicate that samples collected from the Loop 410 site were statistically different from samples collected from the Joint Base site and sites downstream. The PCB congener pattern in the Leon Creek samples is most like the congener mixture in Aroclor 1260, which is chemically similar to the PCBs detected in the fish samples that resulted in the 2003 fish consumption advisory.

Spatial clustering of metal and metalloid mixtures in unregulated water sources on the Navajo Nation - Arizona, New Mexico, and Utah, USA.

PubMed

Hoover, Joseph H; Coker, Eric; Barney, Yolanda; Shuey, Chris; Lewis, Johnnye

2018-08-15

Contaminant mixtures are identified regularly in public and private drinking water supplies throughout the United States; however, the complex and often correlated nature of mixtures makes identification of relevant combinations challenging. This study employed a Bayesian clustering method to identify subgroups of water sources with similar metal and metalloid profiles. Additionally, a spatial scan statistic assessed spatial clustering of these subgroups and a human health metric was applied to investigate potential for human toxicity. These methods were applied to a dataset comprised of metal and metalloid measurements from unregulated water sources located on the Navajo Nation, in the southwest United States. Results indicated distinct subgroups of water sources with similar contaminant profiles and that some of these subgroups were spatially clustered. Several profiles had metal and metalloid concentrations that may have potential for human toxicity including arsenic, uranium, lead, manganese, and selenium. This approach may be useful for identifying mixtures in water sources, spatially evaluating the clusters, and help inform toxicological research investigating mixtures. Copyright © 2018 The Authors. Published by Elsevier B.V. All rights reserved.

A Comparative Ecological Approach to Assess the Role of Watersheds in Estuarine Condition

EPA Science Inventory

Estuarine condition is a function of the geophysical nature of the estuary, the ocean (and atmospheric) system, and the upstream watershed. To fully understand and predict how an estuary will respond to a mixture of natural and anthropogenic drivers and pressures each compartment...

The spatial arrangement of neritina virginea (gastropoda: neritidae) during upstream migration in a split-channel reach.

Treesearch

JUAN F. BLANCO; FREDERICK N. SCATENA

2007-01-01

This paper relates differences in flow hydraulics between a main channel (MC) and a side channel (SC) of a river to patterns of upstream migration by Neritina virginea (Neritidae: Gastropoda), a dominant diadromous snail in streams of Puerto Rico (Greater Antilles). Near-bed water velocity, snail density and shell size were measured on a weekly basis between August and...

Parametric interaction and spatial collapse of beam-driven Langmuir waves in the solar wind. [upstream of Jupiter bow shock

NASA Technical Reports Server (NTRS)

Gurnett, D. A.; Maggs, J. E.; Gallagher, D. L.; Kurth, W. S.; Scarf, F. L.

1981-01-01

Observations are presented of the parametric decay and spatial collapse of Langmuir waves driven by an electron beam streaming into the solar wind from the Jovian bow shock. Long wavelength Langmuir waves upstream of the bow shock are effectively converted into short wavelength waves no longer in resonance with the beam. The conversion is shown to be the result of a nonlinear interaction involving the beam-driven pump, a sideband emission, and a low level of ion-acoustic turbulence. The beam-driven Langmuir wave emission breaks up into a complex sideband structure with both positive and negative Doppler shifts. In some cases, the sideband emission consists of isolated wave packets with very short duration bursts, which are very intense and are thought to consist of envelope solitons which have collapsed to spatial scales of only a few Debye lengths.

Spatial and temporal trends and flow dynamics of glyphosate and other pesticides within an agricultural watershed in Argentina.

PubMed

Pérez, Débora J; Okada, Elena; De Gerónimo, Eduardo; Menone, Mirta L; Aparicio, Virginia C; Costa, José L

2017-12-01

In the present study, we evaluated the spatial and temporal trends of current-use pesticides in surface water and sediments as well as their relationship with hydrological stream dynamics within the agricultural watershed of El Crespo stream (Buenos Aires Province, Argentina). We sampled 2 contrasting sites: site 1 (upstream), surrounded by agricultural lands, and site 2 (downstream), surrounded by natural grasslands. Most of the applied pesticides (glyphosate, 2,4-D, atrazine, tebuconazole, and imidacloprid) were detected at high frequencies in surface water samples at both sites. However, only glyphosate and aminomethylphosphonic acid (AMPA) were present at high concentrations and had a significant spatial-temporal trend. The highest concentrations were found during spring 2014 at site 1, in association with the intense rains that occurred in that season. The fact that glyphosate and AMPA concentrations were higher than the rest of the studied compounds is closely related to the land use within the watershed, as glyphosate was the most applied herbicide during the fallow period of glyphosate-resistant crops (soybean, maize). The pesticide mixture had a significant spatial-temporal trend, reaching the highest levels during storm flow events in spring 2014. The intensive rains in spring 2014 could be the main factor influencing stream hydrology and pesticide behavior at El Crespo watershed. The estimated annual pesticide losses were 3.11 g/ha at site 1 and 0.72 g/ha at site 2. This result indicates that an attenuation process could be decreasing pesticide loads during downstream transport from site 1 to site 2. Environ Toxicol Chem 2017;36:3206-3216. © 2017 SETAC. © 2017 SETAC.

Climate-change influences on the response of macroinvertebrate communities to pesticide contamination in the Sacramento River, California watershed.

PubMed

Chiu, Ming-Chih; Hunt, Lisa; Resh, Vincent H

2017-03-01

Limited studies have addressed how future climate-change scenarios may alter the effects of pesticides on biotic assemblages or the effects of exposures to repeated pulses of pesticide mixtures. We used reported pesticide-use data as input to a hydrological fate and transport model (Soil and Water Assessment Tool) under multiple climate-change scenarios to simulate spatiotemporal dynamics of pesticides mixtures in streams on a daily time-step in the Sacramento River watershed of California. We predicted that there will be increased pesticide application with warming across the watershed, especially in upstream areas. Using a statistical model describing the relationship between macroinvertebrate communities and pesticide dynamics, we found that compared to the baseline period of 1970-1999: (1) most climate-change scenarios predicted increased rainfall and warming across the watershed during 2070-2099; and (2) increasing pesticide contamination and increased impact on macroinvertebrates will likely occur in most areas of the watershed by 2070-2099; and (3) lower increases in effects of pesticides on macroinvertebrates were predicted for the downstream areas with intensive agriculture compared to some upstream areas with less-intensive agriculture. Future efforts on practical adaptation and mitigation strategies can be improved by awareness of altered threats of pesticide mixtures under future climate-change conditions. Copyright © 2017 Elsevier B.V. All rights reserved.

Revealing pMDI Spray Initial Conditions: Flashing, Atomisation and the Effect of Ethanol

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mason-Smith, Nicholas; Duke, Daniel J.; Kastengren, Alan L.

Sprays from pressurised metered-dose inhalers are produced by a transient discharge of a multiphase mixture. Small length and short time scales have made the investigation of the governing processes difficult. Consequently, a deep understanding of the physical processes that govern atomisation and drug particle formation has been elusive. X-ray phase contrast imaging and quantitative radiography were used to reveal the internal flow structure and measure the time-variant nozzle exit mass density of 50 µL metered sprays of HFA134a, with and without ethanol cosolvent. Internal flow patterns were imaged at a magnification of 194 pixels/mm and 7759 frames per second withmore » 150 ps temporal resolution. Spray projected mass was measured with temporal resolution of 1 ms and spatial resolution 6 µm × 5 µm. The flow upstream of the nozzle comprised large volumes of vapour at all times throughout the injection. The inclusion of ethanol prevented bubble coalescence, altering the internal flow structure and discharge. Radiography measurements confirmed that the nozzle exit area is dominantly occupied by vapour, with a peak liquid volume fraction of 13%. Vapour generation in pMDIs occurs upstream of the sump, and the dominant volume component in the nozzle exit orifice is vapour at all times in the injection. Furthermore, the flow in ethanol-containing pMDIs has a bubbly structure resulting in a comparatively stable discharge, whereas the binary structure of propellant-only flows results in unsteady discharge and the production of unrespirable liquid masses.« less

Revealing pMDI Spray Initial Conditions: Flashing, Atomisation and the Effect of Ethanol.

PubMed

Mason-Smith, Nicholas; Duke, Daniel J; Kastengren, Alan L; Traini, Daniela; Young, Paul M; Chen, Yang; Lewis, David A; Edgington-Mitchell, Daniel; Honnery, Damon

2017-04-01

Sprays from pressurised metered-dose inhalers are produced by a transient discharge of a multiphase mixture. Small length and short time scales have made the investigation of the governing processes difficult. Consequently, a deep understanding of the physical processes that govern atomisation and drug particle formation has been elusive. X-ray phase contrast imaging and quantitative radiography were used to reveal the internal flow structure and measure the time-variant nozzle exit mass density of 50 µL metered sprays of HFA134a, with and without ethanol cosolvent. Internal flow patterns were imaged at a magnification of 194 pixels/mm and 7759 frames per second with 150 ps temporal resolution. Spray projected mass was measured with temporal resolution of 1 ms and spatial resolution 6 µm × 5 µm. The flow upstream of the nozzle comprised large volumes of vapour at all times throughout the injection. The inclusion of ethanol prevented bubble coalescence, altering the internal flow structure and discharge. Radiography measurements confirmed that the nozzle exit area is dominantly occupied by vapour, with a peak liquid volume fraction of 13%. Vapour generation in pMDIs occurs upstream of the sump, and the dominant volume component in the nozzle exit orifice is vapour at all times in the injection. The flow in ethanol-containing pMDIs has a bubbly structure resulting in a comparatively stable discharge, whereas the binary structure of propellant-only flows results in unsteady discharge and the production of unrespirable liquid masses.

Revealing pMDI Spray Initial Conditions: Flashing, Atomisation and the Effect of Ethanol

DOE PAGES

Mason-Smith, Nicholas; Duke, Daniel J.; Kastengren, Alan L.; ...

2017-01-17

Sprays from pressurised metered-dose inhalers are produced by a transient discharge of a multiphase mixture. Small length and short time scales have made the investigation of the governing processes difficult. Consequently, a deep understanding of the physical processes that govern atomisation and drug particle formation has been elusive. X-ray phase contrast imaging and quantitative radiography were used to reveal the internal flow structure and measure the time-variant nozzle exit mass density of 50 µL metered sprays of HFA134a, with and without ethanol cosolvent. Internal flow patterns were imaged at a magnification of 194 pixels/mm and 7759 frames per second withmore » 150 ps temporal resolution. Spray projected mass was measured with temporal resolution of 1 ms and spatial resolution 6 µm × 5 µm. The flow upstream of the nozzle comprised large volumes of vapour at all times throughout the injection. The inclusion of ethanol prevented bubble coalescence, altering the internal flow structure and discharge. Radiography measurements confirmed that the nozzle exit area is dominantly occupied by vapour, with a peak liquid volume fraction of 13%. Vapour generation in pMDIs occurs upstream of the sump, and the dominant volume component in the nozzle exit orifice is vapour at all times in the injection. Furthermore, the flow in ethanol-containing pMDIs has a bubbly structure resulting in a comparatively stable discharge, whereas the binary structure of propellant-only flows results in unsteady discharge and the production of unrespirable liquid masses.« less

[Spatial distribution characteristics of the physical and chemical properties of water in the Kunes River after the supply of snowmelt during spring].

PubMed

Liu, Xiang; Guo, Ling-Peng; Zhang, Fei-Yun; Ma, Jie; Mu, Shu-Yong; Zhao, Xin; Li, Lan-Hai

2015-02-01

Eight physical and chemical indicators related to water quality were monitored from nineteen sampling sites along the Kunes River at the end of snowmelt season in spring. To investigate the spatial distribution characteristics of water physical and chemical properties, cluster analysis (CA), discriminant analysis (DA) and principal component analysis (PCA) are employed. The result of cluster analysis showed that the Kunes River could be divided into three reaches according to the similarities of water physical and chemical properties among sampling sites, representing the upstream, midstream and downstream of the river, respectively; The result of discriminant analysis demonstrated that the reliability of such a classification was high, and DO, Cl- and BOD5 were the significant indexes leading to this classification; Three principal components were extracted on the basis of the principal component analysis, in which accumulative variance contribution could reach 86.90%. The result of principal component analysis also indicated that water physical and chemical properties were mostly affected by EC, ORP, NO3(-) -N, NH4(+) -N, Cl- and BOD5. The sorted results of principal component scores in each sampling sites showed that the water quality was mainly influenced by DO in upstream, by pH in midstream, and by the rest of indicators in downstream. The order of comprehensive scores for principal components revealed that the water quality degraded from the upstream to downstream, i.e., the upstream had the best water quality, followed by the midstream, while the water quality at downstream was the worst. This result corresponded exactly to the three reaches classified using cluster analysis. Anthropogenic activity and the accumulation of pollutants along the river were probably the main reasons leading to this spatial difference.

Interactions between river channel processes and riparian vegetation - an example from the Lužnice River, Czech Republic

NASA Astrophysics Data System (ADS)

Krejci, Lukas; Macka, Zdenek

2010-05-01

Riparian vegetation responds to hydrogemorphic processes and environmental changes and also controls these processes. Our study focuses on the interactions between woody riparian vegetation (live and dead trees) and river channel morphology on the example of three 1 km long reaches of the Lužnice River in southern Czech Republic. Here, we propose that despite spatial proximity, identical hydrological and sedimentological controls, three river reaches have different geomorphology due to varying character of riparian woody vegetation and different character and abundance of large in-stream wood (LW). Upstream, middle and downstream reaches vary markedly in channel dimensions (width, depth) and the present day rate of lateral erosion. Three reaches also show the different in-stream wood loads which are dependent mainly on the character of the riparian vegetation, and on the lateral activity of the channel. The highest wood load was recorded at the downstream reach with 102,162 m3/ha, the lowest at the middle reach 37,041 m3/ha, the upstream reach has load 81,370 m3/ha. Upper reach woody vegetation is the mixture of willow, alder, chokecherry and oak. The reach is only slightly sinuous with the moderate rate of incision and lateral erosion. The channel width and depth are 13 m and 2,1 m respectively, the mean cross section area is 27,3 m2. Erosion in the reach is slightly enhanced by the river training works upstream (canalisation, weir construction). Middle reach woody vegetation mostly consist of willow. Tree-tops often incline into the channel, thus, dissipating effectively the energy of the river flow. The reach is moderately sinuous and rather laterally stable. The channel width and depth are 10 m and 2,5 m respectively, the mean cross section area is 25 m2. The reach approximates the natural condition of the pristine river. The impact of river training works is minor only with the road bridge upstream. This reach in the most natural condition shows the lowest in-stream wood load and lowest rate of the present day bank erosion. Downstream reach woody vegetation is discontinuous, alternating with pastures. Riparian trees are the mixture of poplar, willow, alder and oak. The reach is highly sinuous with distinct meanders and laterally very dynamic. The channel width and depth are 15 m and 3,7 m respectively, the mean cross section area is 55,5 m2. The highest bank erosion was noted at the locations with pastures. The specific feature of this reach are fossil oak logs, which are exhumed from the alluvial sediments by the rapid lateral erosion. The enhanced incision and lateral erosion is the combined effect of riparian forest clearance and river training works (canalisation) downstream. The planform changes of the river since 1952 have been studied by analysis of the aerial images. It was derived that floodplain area of 12 450 m2, 16 318 m2 and 20 687 m2 was eroded, of which 10 465 m2, 8496 m2 and 10 733 m2 was wooded land at the upstream, middle and downstream reaches. We estimated that this rate of bank erosion delivered 644, 510 and 628 trees to the river channel since 1952. These numbers represent 390%, 1130% and 285% of the present day number of LW pieces in the river channel. Approximate turnover rates of LW can be estimated from these data. Present day rate of bank erosion and LW input is monitored at selected concave banks by repeated geodetic surveying. The Lužnice River has a sandy bed and LW modifies bed and bank morphology profoundly. We found that 33%, 29% and 36% of LW pieces caused localized erosion (pool formation) and 37%, 24% and 21 % caused local deposition at upstream, middle and downstream river reaches. The research was supported by Czech Science Foundation, grant no. 205/08/0926.

Effects of Radiative Emission and Absorption on the Propagation and Extinction of Premixed Gas Flames

NASA Technical Reports Server (NTRS)

Ju, Yiguang; Masuya, Goro; Ronney, Paul D.

1998-01-01

Premixed gas flames in mixtures of CH4, O2, N2, and CO2 were studied numerically using detailed chemical and radiative emission-absorption models to establish the conditions for which radiatively induced extinction limits may exist independent of the system dimensions. It was found that reabsorption of emitted radiation led to substantially higher burning velocities and wider extinction limits than calculations using optically thin radiation models, particularly when CO2, a strong absorber, is present in the unburned gas, Two heat loss mechanisms that lead to flammability limits even with reabsorption were identified. One is that for dry hydrocarbon-air mixtures, because of the differences in the absorption spectra of H2O and CO2, most of the radiation from product H2O that is emitted in the upstream direction cannot be absorbed by the reactants. The second is that the emission spectrum Of CO2 is broader at flame temperatures than ambient temperature: thus, some radiation emitted near the flame front cannot be absorbed by the reactants even when they are seeded with CO2 Via both mechanisms, some net upstream heat loss due to radiation will always occur, leading to extinction of sufficiently weak mixtures. Downstream loss has practically no influence. Comparison with experiment demonstrates the importance of reabsorption in CO2 diluted mixtures. It is concluded that fundamental flammability limits can exist due to radiative heat loss, but these limits are strongly dependent on the emission-absorption spectra of the reactant and product -gases and their temperature dependence and cannot be predicted using gray-gas or optically thin model parameters. Applications to practical flames at high pressure, in large combustion chambers, and with exhaust-gas or flue-gas recirculation are discussed.

NO formation in the burnout region of a partially premixed methane-air flame with upstream heat loss

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mokhov, A.V.; Levinsky, H.B.

Measurements of temperature and NO concentration in laminar, partially premixed methane-air flames stabilized on a ceramic burner in coflow are reported. The NO concentration and temperature were determined by laser-induced fluorescence (LIF) and coherent anti-Stokes Raman scattering (CARS), respectively. Upstream heat loss to the burner was varied by changing the exit velocity of the fuel-air mixture at a constant equivalence ratio of 1,3; this alters the structure of the flame from an axisymmetric Bunsen-type to a strongly stabilized flat flame. To facilitate analysis of the results, a method is derived for separating the effects of dilution from those of chemicalmore » reaction based on the relation between the measured temperature and the local mixture fraction, including the effects of upstream heat loss. Using this method, the amount of NO formed during burnout of the hot, fuel-rich combustion products can be ascertained. In the Bunsen-type flame, it is seen that {approximately}40 ppm of NO are produced in this burnout region, at temperatures between {approximately}2,100 K and {approximately}1,900 K, probably via the Zeldovich mechanism. Reducing the exit velocity of 12 cm/s reduces the flame temperature substantially, and effectively eliminates this contribution. At velocities of 12 and 8 cm/s, {approximately}10 ppm of NO are formed in the burnout region, even though the gas temperatures are too low for Zeldovich NO to be significant. Although the mechanism responsible for these observations is as yet unclear, the results are consistent with the idea that the low temperatures in the fuel-rich gases caused by upstream heat loss retard the conversion of HCN (formed via the Fenimore mechanism) to NO, with this residual HCN then being converted to NO during burnout.« less

Spatial complementarity of forests and farms: accounting for ecosystem services

Treesearch

Subhrendu K. Pattanayak; David T. Butry

2006-01-01

Our article considers the economic contributions of forest ecosystem services, using a case study from Flores, Indonesia, in which forest protection in upstream watersheds stabilize soil and hydrological flows in downstream farms. We focus on the demand for a weak complement to the ecosystem services--farm labor-- and account for spatial dependence due to economic...

Investigation of H2S separation from H2S/CH4 mixtures using functionalized and non-functionalized vertically aligned carbon nanotube membranes

NASA Astrophysics Data System (ADS)

Gilani, Neda; Towfighi, Jafar; Rashidi, Alimorad; Mohammadi, Toraj; Omidkhah, Mohammad Reza; Sadeghian, Ahmad

2013-04-01

Separation of H2S from binary mixtures of H2S/CH4 using vertically aligned carbon nanotube membranes fabricated in anodic aluminum oxide (AAO) template was studied experimentally. Carbon nanotubes (CNTs) were grown in five AAO templates with different pore diameters using chemical vapor deposition, and CNT/AAO membranes with tubular carbon nanotube structure and open caps were selected for separation of H2S. For this, two tubular CNT/AAO membranes were fabricated with the CNT inner diameters of 23 and 8 nm. It was found that permeability and selectivity of the membrane with inner diameter of 23 nm for CNT were independent of upstream feed pressure and H2S feed concentration unlike that of CNT having an inner diameter of 8 nm. Selectivity of these membranes for separation of H2S was obtained in the ranges of 1.36-1.58 and 2.11-2.86, for CNTs with internal diameters of 23 and 8 nm, respectively. In order to enhance the separation of H2S from H2S/CH4 mixtures, dodecylamine was used to functionalize the CNT/AAO membrane with higher selectivity. The results showed that for amido-functionalized membrane, both upstream feed pressure and H2S partial pressure in the feed significantly increased H2S permeability, and selectivity for H2S being in the range of 3.0-5.57 respectively.

How big of an effect do small dams have? Using geomorphological footprints to quantify spatial impact of low-head dams and identify patterns of across-dam variation

USGS Publications Warehouse

Fencl, Jane S.; Mather, Martha E.; Costigan, Katie H.; Daniels, Melinda D.

2015-01-01

Longitudinal connectivity is a fundamental characteristic of rivers that can be disrupted by natural and anthropogenic processes. Dams are significant disruptions to streams. Over 2,000,000 low-head dams (<7.6 m high) fragment United States rivers. Despite potential adverse impacts of these ubiquitous disturbances, the spatial impacts of low-head dams on geomorphology and ecology are largely untested. Progress for research and conservation is impaired by not knowing the magnitude of low-head dam impacts. Based on the geomorphic literature, we refined a methodology that allowed us to quantify the spatial extent of low-head dam impacts (herein dam footprint), assessed variation in dam footprints across low-head dams within a river network, and identified select aspects of the context of this variation. Wetted width, depth, and substrate size distributions upstream and downstream of six low-head dams within the Upper Neosho River, Kansas, United States of America were measured. Total dam footprints averaged 7.9 km (3.0–15.3 km) or 287 wetted widths (136–437 wetted widths). Estimates included both upstream (mean: 6.7 km or 243 wetted widths) and downstream footprints (mean: 1.2 km or 44 wetted widths). Altogether the six low-head dams impacted 47.3 km (about 17%) of the mainstem in the river network. Despite differences in age, size, location, and primary function, the sizes of geomorphic footprints of individual low-head dams in the Upper Neosho river network were relatively similar. The number of upstream dams and distance to upstream dams, but not dam height, affected the spatial extent of dam footprints. In summary, ubiquitous low-head dams individually and cumulatively altered lotic ecosystems. Both characteristics of individual dams and the context of neighboring dams affected low-head dam impacts within the river network. For these reasons, low-head dams require a different, more integrative, approach for research and management than the individualistic approach that has been applied to larger dams.

How Big of an Effect Do Small Dams Have? Using Geomorphological Footprints to Quantify Spatial Impact of Low-Head Dams and Identify Patterns of Across-Dam Variation

PubMed Central

Costigan, Katie H.; Daniels, Melinda D.

2015-01-01

Longitudinal connectivity is a fundamental characteristic of rivers that can be disrupted by natural and anthropogenic processes. Dams are significant disruptions to streams. Over 2,000,000 low-head dams (<7.6 m high) fragment United States rivers. Despite potential adverse impacts of these ubiquitous disturbances, the spatial impacts of low-head dams on geomorphology and ecology are largely untested. Progress for research and conservation is impaired by not knowing the magnitude of low-head dam impacts. Based on the geomorphic literature, we refined a methodology that allowed us to quantify the spatial extent of low-head dam impacts (herein dam footprint), assessed variation in dam footprints across low-head dams within a river network, and identified select aspects of the context of this variation. Wetted width, depth, and substrate size distributions upstream and downstream of six low-head dams within the Upper Neosho River, Kansas, United States of America were measured. Total dam footprints averaged 7.9 km (3.0–15.3 km) or 287 wetted widths (136–437 wetted widths). Estimates included both upstream (mean: 6.7 km or 243 wetted widths) and downstream footprints (mean: 1.2 km or 44 wetted widths). Altogether the six low-head dams impacted 47.3 km (about 17%) of the mainstem in the river network. Despite differences in age, size, location, and primary function, the sizes of geomorphic footprints of individual low-head dams in the Upper Neosho river network were relatively similar. The number of upstream dams and distance to upstream dams, but not dam height, affected the spatial extent of dam footprints. In summary, ubiquitous low-head dams individually and cumulatively altered lotic ecosystems. Both characteristics of individual dams and the context of neighboring dams affected low-head dam impacts within the river network. For these reasons, low-head dams require a different, more integrative, approach for research and management than the individualistic approach that has been applied to larger dams. PMID:26540105

Using temporal detrending to observe the spatial correlation of traffic.

PubMed

Ermagun, Alireza; Chatterjee, Snigdhansu; Levinson, David

2017-01-01

This empirical study sheds light on the spatial correlation of traffic links under different traffic regimes. We mimic the behavior of real traffic by pinpointing the spatial correlation between 140 freeway traffic links in a major sub-network of the Minneapolis-St. Paul freeway system with a grid-like network topology. This topology enables us to juxtapose the positive and negative correlation between links, which has been overlooked in short-term traffic forecasting models. To accurately and reliably measure the correlation between traffic links, we develop an algorithm that eliminates temporal trends in three dimensions: (1) hourly dimension, (2) weekly dimension, and (3) system dimension for each link. The spatial correlation of traffic links exhibits a stronger negative correlation in rush hours, when congestion affects route choice. Although this correlation occurs mostly in parallel links, it is also observed upstream, where travelers receive information and are able to switch to substitute paths. Irrespective of the time-of-day and day-of-week, a strong positive correlation is witnessed between upstream and downstream links. This correlation is stronger in uncongested regimes, as traffic flow passes through consecutive links more quickly and there is no congestion effect to shift or stall traffic. The extracted spatial correlation structure can augment the accuracy of short-term traffic forecasting models.

Using temporal detrending to observe the spatial correlation of traffic

PubMed Central

2017-01-01

This empirical study sheds light on the spatial correlation of traffic links under different traffic regimes. We mimic the behavior of real traffic by pinpointing the spatial correlation between 140 freeway traffic links in a major sub-network of the Minneapolis—St. Paul freeway system with a grid-like network topology. This topology enables us to juxtapose the positive and negative correlation between links, which has been overlooked in short-term traffic forecasting models. To accurately and reliably measure the correlation between traffic links, we develop an algorithm that eliminates temporal trends in three dimensions: (1) hourly dimension, (2) weekly dimension, and (3) system dimension for each link. The spatial correlation of traffic links exhibits a stronger negative correlation in rush hours, when congestion affects route choice. Although this correlation occurs mostly in parallel links, it is also observed upstream, where travelers receive information and are able to switch to substitute paths. Irrespective of the time-of-day and day-of-week, a strong positive correlation is witnessed between upstream and downstream links. This correlation is stronger in uncongested regimes, as traffic flow passes through consecutive links more quickly and there is no congestion effect to shift or stall traffic. The extracted spatial correlation structure can augment the accuracy of short-term traffic forecasting models. PMID:28472093

Effect of spatial variability of storm on the optimal placement of best management practices (BMPs).

PubMed

Chang, C L; Chiueh, P T; Lo, S L

2007-12-01

It is significant to design best management practices (BMPs) and determine the proper BMPs placement for the purpose that can not only satisfy the water quantity and water quality standard, but also lower the total cost of BMPs. The spatial rainfall variability can have much effect on its relative runoff and non-point source pollution (NPSP). Meantime, the optimal design and placement of BMPs would be different as well. The objective of this study was to discuss the relationship between the spatial variability of rainfall and the optimal BMPs placements. Three synthetic rainfall storms with varied spatial distributions, including uniform rainfall, downstream rainfall and upstream rainfall, were designed. WinVAST model was applied to predict runoff and NPSP. Additionally, detention pond and swale were selected for being structural BMPs. Scatter search was applied to find the optimal BMPs placement. The results show that mostly the total cost of BMPs is higher in downstream rainfall than in upstream rainfall or uniform rainfall. Moreover, the cost of detention pond is much higher than swale. Thus, even though detention pond has larger efficiency for lowering peak flow and pollutant exports, it is not always the determined set in each subbasin.

Ducks in space: from nonlinear absolute instability to noise-sustained structures in a pattern-forming system

NASA Astrophysics Data System (ADS)

Avitabile, D.; Desroches, M.; Knobloch, E.; Krupa, M.

2017-11-01

A subcritical pattern-forming system with nonlinear advection in a bounded domain is recast as a slow-fast system in space and studied using a combination of geometric singular perturbation theory and numerical continuation. Two types of solutions describing the possible location of stationary fronts are identified, whose origin is traced to the onset of convective and absolute instability when the system is unbounded. The former are present only for non-zero upstream boundary conditions and provide a quantitative understanding of noise-sustained structures in systems of this type. The latter correspond to the onset of a global mode and are present even with zero upstream boundary conditions. The role of canard trajectories in the nonlinear transition between these states is clarified and the stability properties of the resulting spatial structures are determined. Front location in the convective regime is highly sensitive to the upstream boundary condition, and its dependence on this boundary condition is studied using a combination of numerical continuation and Monte Carlo simulations of the partial differential equation. Statistical properties of the system subjected to random or stochastic boundary conditions at the inlet are interpreted using the deterministic slow-fast spatial dynamical system.

Ducks in space: from nonlinear absolute instability to noise-sustained structures in a pattern-forming system.

PubMed

Avitabile, D; Desroches, M; Knobloch, E; Krupa, M

2017-11-01

A subcritical pattern-forming system with nonlinear advection in a bounded domain is recast as a slow-fast system in space and studied using a combination of geometric singular perturbation theory and numerical continuation. Two types of solutions describing the possible location of stationary fronts are identified, whose origin is traced to the onset of convective and absolute instability when the system is unbounded. The former are present only for non-zero upstream boundary conditions and provide a quantitative understanding of noise-sustained structures in systems of this type. The latter correspond to the onset of a global mode and are present even with zero upstream boundary conditions. The role of canard trajectories in the nonlinear transition between these states is clarified and the stability properties of the resulting spatial structures are determined. Front location in the convective regime is highly sensitive to the upstream boundary condition, and its dependence on this boundary condition is studied using a combination of numerical continuation and Monte Carlo simulations of the partial differential equation. Statistical properties of the system subjected to random or stochastic boundary conditions at the inlet are interpreted using the deterministic slow-fast spatial dynamical system.

Bayesian 2-Stage Space-Time Mixture Modeling With Spatial Misalignment of the Exposure in Small Area Health Data.

PubMed

Lawson, Andrew B; Choi, Jungsoon; Cai, Bo; Hossain, Monir; Kirby, Russell S; Liu, Jihong

2012-09-01

We develop a new Bayesian two-stage space-time mixture model to investigate the effects of air pollution on asthma. The two-stage mixture model proposed allows for the identification of temporal latent structure as well as the estimation of the effects of covariates on health outcomes. In the paper, we also consider spatial misalignment of exposure and health data. A simulation study is conducted to assess the performance of the 2-stage mixture model. We apply our statistical framework to a county-level ambulatory care asthma data set in the US state of Georgia for the years 1999-2008.

Activation of HIV-1 pre-mRNA 3' processing in vitro requires both an upstream element and TAR.

PubMed Central

Gilmartin, G M; Fleming, E S; Oetjen, J

1992-01-01

The architecture of the human immunodeficiency virus type 1 (HIV-1) genome presents an intriguing dilemma for the 3' processing of viral transcripts--to disregard a canonical 'core' poly(A) site processing signal present at the 5' end of the transcript and yet to utilize efficiently an identical signal that resides at the 3' end of the message. The choice of processing sites in HIV-1 appears to be influenced by two factors: (i) proximity to the cap site, and (ii) sequences upstream of the core poly(A) site. We now demonstrate that an in vivo-defined upstream element that resides within the U3 region, 76 nucleotides upstream of the AAUAAA hexamer, acts specifically to enhance 3' processing at the HIV-1 core poly(A) site in vitro. We furthermore show that efficient in vitro 3' processing requires the RNA stem-loop structure of TAR, which serves to juxtapose spatially the upstream element and the core poly(A) site. An analysis of the stability of 3' processing complexes formed at the HIV-1 poly(A) site in vitro suggests that the upstream element may function by increasing processing complex stability at the core poly(A) site. Images PMID:1425577

A multivariate spatial mixture model for areal data: examining regional differences in standardized test scores

PubMed Central

Neelon, Brian; Gelfand, Alan E.; Miranda, Marie Lynn

2013-01-01

Summary Researchers in the health and social sciences often wish to examine joint spatial patterns for two or more related outcomes. Examples include infant birth weight and gestational length, psychosocial and behavioral indices, and educational test scores from different cognitive domains. We propose a multivariate spatial mixture model for the joint analysis of continuous individual-level outcomes that are referenced to areal units. The responses are modeled as a finite mixture of multivariate normals, which accommodates a wide range of marginal response distributions and allows investigators to examine covariate effects within subpopulations of interest. The model has a hierarchical structure built at the individual level (i.e., individuals are nested within areal units), and thus incorporates both individual- and areal-level predictors as well as spatial random effects for each mixture component. Conditional autoregressive (CAR) priors on the random effects provide spatial smoothing and allow the shape of the multivariate distribution to vary flexibly across geographic regions. We adopt a Bayesian modeling approach and develop an efficient Markov chain Monte Carlo model fitting algorithm that relies primarily on closed-form full conditionals. We use the model to explore geographic patterns in end-of-grade math and reading test scores among school-age children in North Carolina. PMID:26401059

Flow Structures and Efficiency of Swimming Fish school: Numerical Study

NASA Astrophysics Data System (ADS)

Yatagai, Yuzuru; Hattori, Yuji

2013-11-01

The flow structure and energy-saving mechanism in fish school is numerically investigated by using the volume penalization method. We calculate the various patterns of configuration of fishes and investigate the relation between spatial arrangement and the performance of fish. It is found that the down-stream fish gains a hydrodynamic advantage from the upstream wake shed by the upstream fish. The most efficient configuration is that the downstream fish is placed in the wake. It reduces the drag force of the downstream fish in comparison with that in solo swimming.

Investigation of the Impact of the Upstream Induction Zone on LIDAR Measurement Accuracy for Wind Turbine Control Applications using Large-Eddy Simulation

NASA Astrophysics Data System (ADS)

Simley, Eric; Y Pao, Lucy; Gebraad, Pieter; Churchfield, Matthew

2014-06-01

Several sources of error exist in lidar measurements for feedforward control of wind turbines including the ability to detect only radial velocities, spatial averaging, and wind evolution. This paper investigates another potential source of error: the upstream induction zone. The induction zone can directly affect lidar measurements and presents an opportunity for further decorrelation between upstream wind and the wind that interacts with the rotor. The impact of the induction zone is investigated using the combined CFD and aeroelastic code SOWFA. Lidar measurements are simulated upstream of a 5 MW turbine rotor and the true wind disturbances are found using a wind speed estimator and turbine outputs. Lidar performance in the absence of an induction zone is determined by simulating lidar measurements and the turbine response using the aeroelastic code FAST with wind inputs taken far upstream of the original turbine location in the SOWFA wind field. Results indicate that while measurement quality strongly depends on the amount of wind evolution, the induction zone has little effect. However, the optimal lidar preview distance and circular scan radius change slightly due to the presence of the induction zone.

Dynamic Assessment on the Landscape Patterns and Spatio-temporal Change in the mainstream of Tarim River

NASA Astrophysics Data System (ADS)

Zhang, Hui; Xue, Lianqing; Yang, Changbing; Chen, Xinfang; Zhang, Luochen; Wei, Guanghui

2018-01-01

The Tarim River (TR), as the longest inland river at an arid area in China, is a typical regions of vegetation variation research and plays a crucial role in the sustainable development of regional ecological environment. In this paper, the newest dataset of MODND1M NDVI, at a resolution of 500m, were applied to calculate vegetation index in growing season during the period 2000-2015. Using a vegetation coverage index, a trend line analysis, and the local spatial autocorrelation analysis, this paper investigated the landscape patterns and spatio-temporal variation of vegetation coverage at regional and pixel scales over mainstream of the Tarim River, Xinjiang. The results showed that (1) The bare land area on both sides of Tarim River appeared to have a fluctuated downward trend and there were two obvious valley values in 2005 and 2012. (2) Spatially, the vegetation coverage improved areas is mostly distributed in upstream and the degraded areas is mainly distributed in the left bank of midstream and the end of Tarim River during 2000-2005. (3) The local spatial auto-correlation analysis revealed that vegetation coverage was spatially positive autocorrelated and spatial concentrated. The high-high self-related areas are mainly distributed in upstream, where vegetation cover are relatively good, and the low-low self-related areas are mostly with lower vegetation cover in the lower reaches of Tarim River.

Novel positioning method using Gaussian mixture model for a monolithic scintillator-based detector in positron emission tomography

NASA Astrophysics Data System (ADS)

Bae, Seungbin; Lee, Kisung; Seo, Changwoo; Kim, Jungmin; Joo, Sung-Kwan; Joung, Jinhun

2011-09-01

We developed a high precision position decoding method for a positron emission tomography (PET) detector that consists of a thick slab scintillator coupled with a multichannel photomultiplier tube (PMT). The DETECT2000 simulation package was used to validate light response characteristics for a 48.8 mm×48.8 mm×10 mm slab of lutetium oxyorthosilicate coupled to a 64 channel PMT. The data are then combined to produce light collection histograms. We employed a Gaussian mixture model (GMM) to parameterize the composite light response with multiple Gaussian mixtures. In the training step, light photons acquired by N PMT channels was used as an N-dimensional feature vector and were fed into a GMM training model to generate optimal parameters for M mixtures. In the positioning step, we decoded the spatial locations of incident photons by evaluating a sample feature vector with respect to the trained mixture parameters. The average spatial resolutions after positioning with four mixtures were 1.1 mm full width at half maximum (FWHM) at the corner and 1.0 mm FWHM at the center section. This indicates that the proposed algorithm achieved high performance in both spatial resolution and positioning bias, especially at the corner section of the detector.

Pesticides drive risk of micropollutants in wastewater-impacted streams during low flow conditions.

PubMed

Munz, Nicole A; Burdon, Francis J; de Zwart, Dick; Junghans, Marion; Melo, Laura; Reyes, Marta; Schönenberger, Urs; Singer, Heinz P; Spycher, Barbara; Hollender, Juliane; Stamm, Christian

2017-03-01

Micropollutants enter surface waters through various pathways, of which wastewater treatment plants (WWTPs) are a major source. The large diversity of micropollutants and their many modes of toxic action pose a challenge for assessing environmental risks. In this study, we investigated the potential impact of WWTPs on receiving ecosystems by describing concentration patterns of micropollutants, predicting acute risks for aquatic organisms and validating these results with macroinvertebrate biomonitoring data. Grab samples were taken upstream, downstream and at the effluent of 24 Swiss WWTPs during low flow conditions across independent catchments with different land uses. Using liquid chromatography high resolution tandem mass spectrometry, a comprehensive target screening of almost 400 organic substances, focusing mainly on pesticides and pharmaceuticals, was conducted at two time points, and complemented with the analysis of a priority mixture of 57 substances over eight time points. Acute toxic pressure was predicted using the risk assessment approach of the multi-substance potentially affected fraction, first applying concentration addition for substances with the same toxic mode of action and subsequently response addition for the calculation of the risk of the total mixture. This toxic pressure was compared to macroinvertebrate sensitivity to pesticides (SPEAR index) upstream and downstream of the WWTPs. The concentrations were, as expected, especially for pharmaceuticals and other household chemicals higher downstream than upstream, with the detection frequency of plant protection products upstream correlating with the fraction of arable land in the catchments. While the concentration sums downstream were clearly dominated by pharmaceuticals or other household chemicals, the acute toxic pressure was mainly driven by pesticides, often caused by the episodic occurrence of these compounds even during low flow conditions. In general, five single substances explained much of the total risk, with diclofenac, diazinon and clothianidin as the main drivers. Despite the low predicted acute risk of 0%-2.1% for affected species, a significant positive correlation with macroinvertebrate sensitivity to pesticides was observed. However, more effect data for pharmaceuticals and a better quantification of episodic pesticide pollution events are needed for a more comprehensive risk assessment. Copyright © 2016 Elsevier Ltd. All rights reserved.

Optical narrow band frequency analysis of polystyrene bead mixtures

NASA Astrophysics Data System (ADS)

Popov, Kaloyan A.; Kurzweg, Timothy P.

2010-02-01

Early pre-cancerous conditions in tissue can be studied as mixture of cancerous and healthy cells. White light spectroscopy is a promising technique for determining the size of scattering elements, which, in cells are the nuclei. However, in a mixture of different sized scatterers, possibly between healthy and cancerous cells, the white light spectroscopy spatial data is not easily analyzed, making it difficult to determine the individual components that comprise the mixture. We have previously found by obtaining spatial limited data by using an optical filter and converting this spatial data into the Fourier domain, we can determine characteristic signature frequencies for individual scatterers. In this paper, we show analysis of phantom tissues representing esophagus tissue. We examine phantom tissue representing pre-cancerous conditions, when some of the cell nuclei increase in size. We also experimentally show a relationship between the particle concentration and the amplitude of the Fourier signature peak. In addition, we discuss the frequency peak amplitude dependency based on the Tyndall Effect, which describes particles aggregating into clusters.

Use of a glimpsing model to understand the performance of listeners with and without hearing loss in spatialized speech mixtures

PubMed Central

Best, Virginia; Mason, Christine R.; Swaminathan, Jayaganesh; Roverud, Elin; Kidd, Gerald

2017-01-01

In many situations, listeners with sensorineural hearing loss demonstrate reduced spatial release from masking compared to listeners with normal hearing. This deficit is particularly evident in the “symmetric masker” paradigm in which competing talkers are located to either side of a central target talker. However, there is some evidence that reduced target audibility (rather than a spatial deficit per se) under conditions of spatial separation may contribute to the observed deficit. In this study a simple “glimpsing” model (applied separately to each ear) was used to isolate the target information that is potentially available in binaural speech mixtures. Intelligibility of these glimpsed stimuli was then measured directly. Differences between normally hearing and hearing-impaired listeners observed in the natural binaural condition persisted for the glimpsed condition, despite the fact that the task no longer required segregation or spatial processing. This result is consistent with the idea that the performance of listeners with hearing loss in the spatialized mixture was limited by their ability to identify the target speech based on sparse glimpses, possibly as a result of some of those glimpses being inaudible. PMID:28147587

What's Upstream? GIS's critical role in developing nutrient ...

EPA Pesticide Factsheets

Eutrophication due to excess levels of nitrogen and phosphorus can seriously impair ecological function in estuaries. Protective criteria for nutrients are difficult to establish because the source can vary spatially and seasonally, originate either from the watershed or the ocean, and be natural or anthropogenic. GIS tools and processes can help in developing nutrient criteria by establishing reference conditions representative of natural background nutrient levels. Along the Oregon Coast in the Pacific Northwest, the primary source of nutrients in the wet season (November-April) is generally riverine. We delineated and extracted explicit spatial data from watersheds upstream of riverine water quality monitoring stations for parametric comparison to recorded nutrient levels. The SPARROW model (Wise and Johnson, 2011) was used to estimate relative contributions of nutrient sources at each station. Both raster and vector spatial data were used and include land use / land cover, demography, geology, terrain, precipitation and forest type. The relationships of nutrients to spatial data were then explored as an approach to establishing the reference expectation. The abstract introduces Geographic Information Systems (GIS) tools and processes employed for research conducted under the Safe and Sustainable Water Resources (SSWR) Task 2.3A, entitled “Nutrient Management for Sustainability of Aquatic Ecosystems.” One of the goals of the EPA Office of Water is to

CLASSIFYING COASTAL ENVIRONMENTS: HISTORICAL PESPECTIVE AND CURRENT NECESSITY

EPA Science Inventory

Coastal environments are particularly complex due to variations in geology and upstream watersheds, and are subject to dynamic spatial and temporal changes. Their diverse characteristics result in wide variations in response to environmental stressors such as nutrient over-enrich...

HEAVY METALS STRUCTURE BENTHIC COMUNITIES IN COLORADO MOUNTAIN STREAMS

EPA Science Inventory

The development of field sampling designs that employ multiple reference and polluted sites has been proposed as an alternative to the traditional upstream vs. downstream approach used in most biomonitoring studies. Spatially extensive monitoring programs can characterize ecologi...

Cyclic steps due to the surge-type turbidity currents in flume experiments: effect of surge duration on the topography of steps

NASA Astrophysics Data System (ADS)

Yokokawa, Miwa; Yamano, Junpei; Miyai, Masatomo; Hughes Clarke, John; Izumi, Norihiro

2017-04-01

Field observations of turbidity currents and seabed topography on the Squamish delta in British Columbia, Canada revealed that cyclic steps formed by the surge-type turbidity currents (e.g., Hughes Clarke et al., 2014). The high-density portion of the flow, which affects the sea floor morphology, lasted only 30-60 seconds. We are doing flume experiments aiming to investigate the relationship between the condition of surges and topography of resultant steps. In this presentation, we are going to discuss about the effect of surge duration on the topography of steps. The experiments have been performed at Osaka Institute of Technology. A flume, which is 7.0 m long, 0.3 m deep and 2 cm wide, was suspended in a larger tank, which is 7.6 m long, 1.2 m deep and 0.3 m wide, filled with water. The inner flume tilted at 7 degrees. As a source of turbidity currents, mixture of salt water (1.17 g/cm^3) and plastic particles (1.3 g/cm^3, 0.1-0.18 mm in diameter) was prepared. The concentration of the sediments was 6.1 weight % (5.5 volume %) in the head tank. This mixture of salt water and plastic particles poured into the upstream end of the inner flume from head tank for 3 seconds or 7 seconds. 140 surges were made respectively. Discharge of the currents were fluctuated but range from 306 to 870 mL for 3s-surge, and from 1134 to 2030 mL for 7s-surge. As a result, five or six steps were formed respectively. At the case of 3s-surge, steps located at upstream portion of the flume moved vigorously toward upstream direction, whereas steps at downstream portion of the flume moved toward upstream direction at the case of 7s-surge. The wavelengths and wave heights of the steps by 3s-surge are larger than those of 7s-surge at the upstream portion of the flume, but the size of steps of 3s-surge are smaller than those of 7s-surge at the downstream portion of the flume. In this condition of slope and concentration, the longer surge duration, i.e. larger discharge of the current transports the sediment further and makes the steps larger and active at the further location from the source of the currents.

Polymorphic mountain whitefish (Prosopium williamsoni) in a coastal riverscape: size class assemblages, distribution, and habitat associations

USGS Publications Warehouse

Starr, James C.; Torgersen, Christian E.

2015-01-01

We compared the assemblage structure, spatial distributions, and habitat associations of mountain whitefish (Prosopium williamsoni) morphotypes and size classes. We hypothesised that morphotypes would have different spatial distributions and would be associated with different habitat features based on feeding behaviour and diet. Spatially continuous sampling was conducted over a broad extent (29 km) in the Calawah River, WA (USA). Whitefish were enumerated via snorkelling in three size classes: small (10–29 cm), medium (30–49 cm), and large (≥50 cm). We identified morphotypes based on head and snout morphology: a pinocchio form that had an elongated snout and a normal form with a blunted snout. Large size classes of both morphotypes were distributed downstream of small and medium size classes, and normal whitefish were distributed downstream of pinocchio whitefish. Ordination of whitefish assemblages with nonmetric multidimensional scaling revealed that normal whitefish size classes were associated with higher gradient and depth, whereas pinocchio whitefish size classes were positively associated with pool area, distance upstream, and depth. Reach-scale generalised additive models indicated that normal whitefish relative density was associated with larger substrate size in downstream reaches (R2 = 0.64), and pinocchio whitefish were associated with greater stream depth in the reaches farther upstream (R2 = 0.87). These results suggest broad-scale spatial segregation (1–10 km), particularly between larger and more phenotypically extreme individuals. These results provide the first perspective on spatial distributions and habitat relationships of polymorphic mountain whitefish.

Spatial and temporal patterns of endocrine active chemicals in small streams indicate differential exposure to aquatic organisms

USGS Publications Warehouse

Lee, K.E.; Barber, L.B.; Schoenfuss, H.L.

2014-01-01

Alkylphenolic chemicals (APCs) and hormones were measured six times from February through October 2007 in three Minnesota streams receiving wastewater to identify spatial and temporal patterns in concentrations and in estrogen equivalency. Fish were collected once during the study to evaluate endpoints indicative of endocrine disruption. The most commonly detected APCs were 4-tert-octylphenol and 4-nonylphenol and the most commonly detected hormones were estrone and androstenedione. Chemical concentrations were greatest for nonylphenol ethoxycarboxylates (NPECs) (5,000-140,000 ng/l), followed by 4-nonlylphenol and 4-nonylphenolethoxylates (50-880 ng/l), 4-tert-octylphenol and 4-tert-octylphenolethoxylates with concentrations as great as 130 ng/l, and hormones (0.1-54 ng/l). Patterns in chemicals and estrogen equivalency indicated that wastewater effluent is a pathway of APCs and hormones to downstream locations in this study. However, upstream contributions can be equally or more important indicating alternative sources. This study indicates that aquatic organisms experience both spatially and temporally variable exposures in the number of compounds, total concentrations, and estrogenicity. This variability was evident in fish collected from the three rivers as no clear upstream to downstream pattern of endocrine disruption endpoints emerged.

SEASONAL AND LONGITUDINAL HOMOGENEITY OF SUSPENDED PARTICLES IN SAN FRANCISCO BAY, CA

EPA Science Inventory

Coastal environments are particularly complex due to variations in geology and upstream watersheds, and are subject to dynamic spatial and temporal changes. Their diverse characteristics result in wide variations in response to environmental stressors such as nutrient over-enrich...

Wide size range fast integrated mobility spectrometer

DOEpatents

Wang, Jian

2013-10-29

A mobility spectrometer to measure a nanometer particle size distribution is disclosed. The mobility spectrometer includes a conduit and a detector. The conduit is configured to receive and provide fluid communication of a fluid stream having a charged nanometer particle mixture. The conduit includes a separator section configured to generate an electrical field of two dimensions transverse to a dimension associated with the flow of the charged nanometer particle mixture through the separator section to spatially separate charged nanometer particles of the charged nanometer particle mixture in said two dimensions. The detector is disposed downstream of the conduit to detect concentration and position of the spatially-separated nanometer particles.

The importance of lake-specific characteristics for water quality across the continental United States.

PubMed

Read, Emily K; Patil, Vijay P; Oliver, Samantha K; Hetherington, Amy L; Brentrup, Jennifer A; Zwart, Jacob A; Winters, Kirsten M; Corman, Jessica R; Nodine, Emily R; Woolway, R Iestyn; Dugan, Hilary A; Jaimes, Aline; Santoso, Arianto B; Hong, Grace S; Winslow, Luke A; Hanson, Paul C; Weathers, Kathleen C

2015-06-01

Lake water quality is affected by local and regional drivers, including lake physical characteristics, hydrology, landscape position, land cover, land use, geology, and climate. Here, we demonstrate the utility of hypothesis testing within the landscape limnology framework using a random forest algorithm on a national-scale, spatially explicit data set, the United States Environmental Protection Agency's 2007 National Lakes Assessment. For 1026 lakes, we tested the relative importance of water quality drivers across spatial scales, the importance of hydrologic connectivity in mediating water quality drivers, and how the importance of both spatial scale and connectivity differ across response variables for five important in-lake water quality metrics (total phosphorus, total nitrogen, dissolved organic carbon, turbidity, and conductivity). By modeling the effect of water quality predictors at different spatial scales, we found that lake-specific characteristics (e.g., depth, sediment area-to-volume ratio) were important for explaining water quality (54-60% variance explained), and that regionalization schemes were much less effective than lake specific metrics (28-39% variance explained). Basin-scale land use and land cover explained between 45-62% of variance, and forest cover and agricultural land uses were among the most important basin-scale predictors. Water quality drivers did not operate independently; in some cases, hydrologic connectivity (the presence of upstream surface water features) mediated the effect of regional-scale drivers. For example, for water quality in lakes with upstream lakes, regional classification schemes were much less effective predictors than lake-specific variables, in contrast to lakes with no upstream lakes or with no surface inflows. At the scale of the continental United States, conductivity was explained by drivers operating at larger spatial scales than for other water quality responses. The current regulatory practice of using regionalization schemes to guide water quality criteria could be improved by consideration of lake-specific characteristics, which were the most important predictors of water quality at the scale of the continental United States. The spatial extent and high quality of contextual data available for this analysis makes this work an unprecedented application of landscape limnology theory to water quality data. Further, the demonstrated importance of lake morphology over other controls on water quality is relevant to both aquatic scientists and managers.

Experimental measurements and Monte Carlo simulations of dose perturbation around a nonradioactive brachytherapy seed due to 6- and 18-MV photons.

PubMed

Steinman, James Paul; Bakhtiari, Mohammad; Malhotra, Harish Kumar

2012-01-01

Radioactive seeds used in permanent prostate brachytherapy are composed of high-Z metals and may exceed 100 in a patient. If supplemental external beam treatment is administered afterward, the seeds may cause substantial dose perturbation, which is being investigated in this article. Film measurements using 6-MV beam were primarily carried out using Kodak XV2 film layered above and below a nonradioactive iodine-125 ((125)I) seed. Monte Carlo simulations were carried out using DOSXYZnrc. Other experimental comparisons looked at changing beam energy, depth, and field size, including two opposing fields' pair. Effect of multiple seeds spatially spaced 0.5cm vertically was also studied. For a single (125)I seed, on XV film, there is a localized dose enhancement of 6.3% upstream and -10.9% downstream. With two opposing fields, a cold spot around the seed of ∼3% was noticed. Increasing beam energy and field size decreased the magnitude of this effect, whereas the effect was found to increase with the increasing Z of material. DOSXYZnrc and EBT-2 film verified maximum dose enhancement of +15% upstream and -20% downstream of the (125)I seed surface. In general, the dose perturbation because of the seeds was spatially limited to ∼2mm upstream and ∼5mm downstream to the incident beam. Similar to other heterogeneities, the seeds perturbation depends on incident beam energy, field size, and its Z. With multiple seeds spatially apart and multiple radiation fields routinely used in external beam radiotherapy, the cumulative effect may not result in clinically significant dose perturbation. Copyright © 2012 American Brachytherapy Society. Published by Elsevier Inc. All rights reserved.

Temporal trends and spatial patterns in nutrient export along the Mississippi River and its Tributaries

NASA Astrophysics Data System (ADS)

Stewart, B.; Li, L.

2017-12-01

The Mississippi River, the largest river in the U. S., exports excessive nutrients from the land to the sea, causing the problem of hypoxia in the Gulf of Mexico. In this research, we examined nutrient export along the Mississippi River and its tributaries to understand its trends and patterns and to identify the major factors contributing to these trends. We examined nutrient data from 1950 - 2017 for four sites along the Mississippi River and four tributary sites from the U. S. Geological Survey. The species included: total nitrogen, organic nitrogen, ammonia, nitrate, orthophosphate, and phosphorous. We analyzed the power law relationship of concentration and discharge, for which the export of nutrient species exhibited several trends. Both nitrogen (N) and phosphorous (P) species exhibited mostly chemodynamic behavior. This is in contrast to previous observations in smaller agricultural land where N and P export was mostly chemostatic with no significant change in concentration as discharge varies, suggesting possible scaling effects at different spatial scales. We also compared the average annual concentration over time at each site. The N concentration decreased from upstream to downstream, likely due to greater agricultural activities in the upstream Mississippi river and possible denitrification along the river. The N concentration also increased with time. The P species, however, fluctuated from site to site with no clear spatial patterns, but consistently exhibited higher concentrations at upstream sites with greater agricultural activities. The P species also fluctuated over time, likely due to patterns in discharge and agricultural activities. The results of this research can be further explored by calculating the total export of nutrients into the Gulf of Mexico to determine limits and drivers of nutrient export for better water management, thus helping prevent hypoxia and eutrophication within the Mississippi River basin.

Influence of remediation in a mine-impacted river: Metal trends over large spatial and temporal scales

USGS Publications Warehouse

Hornberger, Michelle I.; Luoma, S.N.; Johnson, M.L.; Holyoak, M.

2009-01-01

The effectiveness of mine-waste remediation at the Clark Fork River Superfund site in western Montana, USA, was examined by monitoring metal concentrations in resident biota (caddisfly, Hydropsyche spp.) and bed sediment over a 19-year period. Remediation activities began in 1990 and are ongoing. In the upper 45 km, reduced Cu and Cd concentrations at some sites were coincident with remediation events. However, for a period of three years, the decline in Cu and Cd directly below the treatment ponds was offset by high arsenic concentrations, suggesting that remediation for cations (e.g., Cu and Cd) mobilized anions such as arsenic. The impact of remediation in the middle and lower reaches was confounded by a significant positive relationship between metal bioaccumulation and stream discharge. High flows did not dilute metals but redistributed contaminants throughout the river. The majority of clean-up efforts were focused on reducing metal-rich sediments in the most contaminated upstream reach, implicitly assuming that improvements upstream will positively impact the downstream stations. We tested this assumption by correlating temporal metal trends in sediment between and among stations. The strength of that association (r value) was our indicator of spatial connectivity. Connectivity for both Cu and Cd was strong at small spatial scales. Large-scale connectivity was strongest with Cu since similar temporal reductions were observed at most monitoring stations. The most upstream station, closest to remediation, had the lowest connectivity, but the next three downstream sites were strongly correlated to trends downstream. Targeted remediation in this reach would be an effective approach to positively influencing the downstream stations. ?? 2009 by the Ecological Society ot America.

Catalytic conversion of cellulose to liquid hydrocarbon fuels by progressive removal of oxygen to facilitate separation processes and achieve high selectivities

DOEpatents

Dumesic, James A [Verona, WI; Ruiz, Juan Carlos Serrano [Madison, WI; West, Ryan M [Madison, WI

2012-04-03

Described is a method to make liquid chemicals, such as functional intermediates, solvents, and liquid fuels from biomass-derived cellulose. The method is cascading; the product stream from an upstream reaction can be used as the feedstock in the next downstream reaction. The method includes the steps of deconstructing cellulose to yield a product mixture comprising levulinic acid and formic acid, converting the levulinic acid to .gamma.-valerolactone, and converting the .gamma.-valerolactone to pentanoic acid. Alternatively, the .gamma.-valerolactone can be converted to a mixture of n-butenes. The pentanoic acid so formed can be further reacted to yield a host of valuable products. For example, the pentanoic acid can be decarboxylated yield 1-butene or ketonized to yield 5-nonanone. The 5-nonanone can be hydrodeoxygenated to yield nonane, or 5-nonanone can be reduced to yield 5-nonanol. The 5-nonanol can be dehydrated to yield nonene, which can be dimerized to yield a mixture of C.sub.9 and C.sub.18 olefins, which can be hydrogenated to yield a mixture of alkanes. Alternatively, the nonene may be isomerized to yield a mixture of branched olefins, which can be hydrogenated to yield a mixture of branched alkanes. The mixture of n-butenes formed from .gamma.-valerolactone can also be subjected to isomerization and oligomerization to yield olefins in the gasoline, jet and Diesel fuel ranges.

Stability of a Premixed Flame in Stagnation-Point Flow Against General Disturbance

DTIC Science & Technology

1992-06-01

Tien and Matalon 1990; Dixon-Lewis 1991) aimed at understanding the structure and burning characteristics of laminar flames. Results of these studies...upstream, the flow field is the classical stagnation-point flow characterized by the strain rate e. The flame, which separates the burned products from the...fresh unburned mixture, is considered thin and is therefore represented by the surface O(x,y,z,t) - 0, where * > 0 is the burned gas region. The flame

Oxidations of organic matter present in the phosphoric acid 54% by the ozone: characterization of groups carbonyls upstream and downstream of the ozonation

NASA Astrophysics Data System (ADS)

Linda, D.; Louati, A.; Chtara, C.; Kabadou, A.

2012-02-01

This study was focused on the oxidation of organic matter in phosphoric acid 54% by ozone. In order to understand the mechanisms involved in this process, the identification of this matter upstream and downstream of the ozonation was necessary. For the identification, after an extraction by a mixture (dichloro-methanol), the organic phase was divided into two parts: the residue and the extract:-The residue was studied by infrared spectroscopy Fourier Transform (IR-TF). It contains Kérogène which is a mixture of saturated hydrocarbons with high molecular weights. The absorption bands of the FT-IR showed that the residue contains also quantities of amino that correspond to the remains of dinoflagellate cysts, which are abundant in sediments.-The extract has been the subject of a detailed study by, chromatography on silica column, IR-TF spectroscopy and CG-SM. The passage of this extract on a silica column yielded two fractions (saturated fraction and polar fraction). Both of these fractions were analyzed by CG-SM. The yield of the reduction of the organic matter content in the phosphoric acid 54% could not exceed 29%. Therefore, we can conclude that the reduction in the rate of organic matter remains limited by the fact that some compounds are inert towards ozone.

Clustering and flow around a sphere moving into a grain cloud.

PubMed

Seguin, A; Lefebvre-Lepot, A; Faure, S; Gondret, P

2016-06-01

A bidimensional simulation of a sphere moving at constant velocity into a cloud of smaller spherical grains far from any boundaries and without gravity is presented with a non-smooth contact dynamics method. A dense granular "cluster" zone builds progressively around the moving sphere until a stationary regime appears with a constant upstream cluster size. The key point is that the upstream cluster size increases with the initial solid fraction [Formula: see text] but the cluster packing fraction takes an about constant value independent of [Formula: see text]. Although the upstream cluster size around the moving sphere diverges when [Formula: see text] approaches a critical value, the drag force exerted by the grains on the sphere does not. The detailed analysis of the local strain rate and local stress fields made in the non-parallel granular flow inside the cluster allows us to extract the local invariants of the two tensors: dilation rate, shear rate, pressure and shear stress. Despite different spatial variations of these invariants, the local friction coefficient μ appears to depend only on the local inertial number I as well as the local solid fraction, which means that a local rheology does exist in the present non-parallel flow. The key point is that the spatial variations of I inside the cluster do not depend on the sphere velocity and explore only a small range around the value one.

Evolving force balance at Columbia Glacier, Alaska, during its rapid retreat

USGS Publications Warehouse

O'Neel, S.; Pfeffer, W.T.; Krimmel, R.; Meier, M.

2005-01-01

Changes in driving and resistive stresses play an essential role in governing the buoyancy forces that are important controls on the speed and irreversibility of tidewater glacier retreats. We describe changes in geometry, velocity, and strain rate and present a top-down force balance analysis performed over the lower reach of Columbia Glacier. Our analysis uses new measurements and estimates of basal topography and photogrammetric surface velocity measurements made between 1977 and 2001, while assuming depth-independent strain. Sensitivity tests show that the method is robust and insensitive to small changes in the calculation parameters. Spatial distributions of ice speed show little correspondence with driving stress. Instead, spatial patterns of ice speed exhibit a nonlinear correspondence with basal drag. Primary resistance to flow comes from basal drag, but lateral drag becomes increasingly more important throughout the retreat, which may account for observed increases in speed. Maximum basal drag is always located in a prominent constriction located ~12 km upstream from the preretreat terminus. Once the terminus retreated into deep water off the terminal moraine marking the modern maximum extent, the upstream location of this maximum basal drag helped to promote thinning and decrease effective pressure in the lower region by limiting replenishing ice flow from upstream. An increase in both ice velocity and calving resulted, initiating what appears to be an irreversible retreat. Copyright 2005 by the American Geophysical Union.

Graffiti for science: Qualitative detection of erosional patterns through bedrock erosion painting

NASA Astrophysics Data System (ADS)

Beer, Alexander R.; Kirchner, James W.; Turowski, Jens M.

2016-04-01

Bedrock erosion is a crucial constraint on stream channel incision, and hence whole landscape evolution, in steep mountainous terrain and tectonically active regions. Several interacting processes lead to bedrock erosion in stream channels, with hydraulic shear detachment, plucking, and abrasion due to sediment impacts generally being the most efficient. Bedrock topography, together with the sediment tools and cover effects, regulate the rate and spatial pattern of in situ surface change. Measurements of natural bedrock erosion rates are valuable for understanding the underlying process physics, as well as for modelling landscape evolution and designing engineered structures. However, quantifying spatially distributed bedrock erosion rates in natural settings is challenging and few such measurements exist. We studied spatial bedrock erosion in a 30m-long bedrock gorge in the Gornera, a glacial meltwater stream above Zermatt. This stream is flushed episodically with sediment-laden streamflow due to hydropower operations upstream, with negligible discharge in the gorge in between these flushing events. We coated several bedrock surface patches with environmentally safe, and water-insoluble outdoor paint to document the spatial pattern of surface abrasion, or to be more precise, to document its driving forces. During four consecutive years, the change of the painted areas was recorded repeatedly with photographs before the painting was renewed. These photographs visually documented the spatial patterns of vertical erosion (channel incision), of lateral erosion (channel widening) and of downstream-directed erosion (channel clearance). The observed qualitative patterns were verified through comparison to quantitative change detection analyses based on annual high-resolution terrestrial laser scanning surveys of the bedrock surfaces. Comparison of repeated photographs indicated a temporal cover effect and a general height limit of the tools effect above the streambed during flushing events. Further, the photographs clearly show the erosional development of a UFCS (upstream-facing convex surface) feature with an upstream-facing surface full of impact marks, a sharp crest-line, and an adjacent downstream-facing surface preserved from sediment impacts. This pilot study documents that bedrock erosion painting provides an easy, cost-efficient and clear qualitative method for detecting the spatial distribution of bedrock erosion and inferring its controlling factors. Our results show that the susceptibility of a painted surface to abrasion is controlled by its position in the channel and its spatial orientation relative to the sediment-laden flow. Erosion painting is a scientifically useful form of graffiti that could be widely applied in both natural and laboratory settings, providing insight into patterns and processes of erosion.

Effect of fuel composition and differential diffusion on flame stabilization in reacting syngas jets in turbulent cross-flow

DOE PAGES

Minamoto, Yuki; Kolla, Hemanth; Grout, Ray W.; ...

2015-07-24

Here, three-dimensional direct numerical simulation results of a transverse syngas fuel jet in turbulent cross-flow of air are analyzed to study the influence of varying volume fractions of CO relative to H 2 in the fuel composition on the near field flame stabilization. The mean flame stabilizes at a similar location for CO-lean and CO-rich cases despite the trend suggested by their laminar flame speed, which is higher for the CO-lean condition. To identify local mixtures having favorable mixture conditions for flame stabilization, explosive zones are defined using a chemical explosive mode timescale. The explosive zones related to flame stabilizationmore » are located in relatively low velocity regions. The explosive zones are characterized by excess hydrogen transported solely by differential diffusion, in the absence of intense turbulent mixing or scalar dissipation rate. The conditional averages show that differential diffusion is negatively correlated with turbulent mixing. Moreover, the local turbulent Reynolds number is insufficient to estimate the magnitude of the differential diffusion effect. Alternatively, the Karlovitz number provides a better indicator of the importance of differential diffusion. A comparison of the variations of differential diffusion, turbulent mixing, heat release rate and probability of encountering explosive zones demonstrates that differential diffusion predominantly plays an important role for mixture preparation and initiation of chemical reactions, closely followed by intense chemical reactions sustained by sufficient downstream turbulent mixing. The mechanism by which differential diffusion contributes to mixture preparation is investigated using the Takeno Flame Index. The mean Flame Index, based on the combined fuel species, shows that the overall extent of premixing is not intense in the upstream regions. However, the Flame Index computed based on individual contribution of H 2 or CO species reveals that hydrogen contributes significantly to premixing, particularly in explosive zones in the upstream leeward region, i.e. at the preferred flame stabilization location. Therefore, a small amount of H 2 diffuses much faster than CO, creating relatively homogeneous mixture pockets depending on the competition with turbulent mixing. These pockets, together with high H 2 reactivity, contribute to stabilizing the flame at a consistent location regardless of the CO concentration in the fuel for the present range of DNS conditions.« less

Reduced-order modellin for high-pressure transient flow of hydrogen-natural gas mixture

NASA Astrophysics Data System (ADS)

Agaie, Baba G.; Khan, Ilyas; Alshomrani, Ali Saleh; Alqahtani, Aisha M.

2017-05-01

In this paper the transient flow of hydrogen compressed-natural gas (HCNG) mixture which is also referred to as hydrogen-natural gas mixture in a pipeline is numerically computed using the reduced-order modelling technique. The study on transient conditions is important because the pipeline flows are normally in the unsteady state due to the sudden opening and closure of control valves, but most of the existing studies only analyse the flow in the steady-state conditions. The mathematical model consists in a set of non-linear conservation forms of partial differential equations. The objective of this paper is to improve the accuracy in the prediction of the HCNG transient flow parameters using the Reduced-Order Modelling (ROM). The ROM technique has been successfully used in single-gas and aerodynamic flow problems, the gas mixture has not been done using the ROM. The study is based on the velocity change created by the operation of the valves upstream and downstream the pipeline. Results on the flow characteristics, namely the pressure, density, celerity and mass flux are based on variations of the mixing ratio and valve reaction and actuation time; the ROM computational time cost advantage are also presented.

What’s Upstream? GIS’s critical role in developing nutrient reference conditions for estuaries

EPA Science Inventory

Eutrophication due to excess levels of nitrogen and phosphorus can seriously impair ecological function in estuaries. Protective criteria for nutrients are difficult to establish because the source can vary spatially and seasonally, originate either from the watershed or the oce...

Spatial heterogeneity in parasite infections at different spatial scales in an intertidal bivalve.

PubMed

Thieltges, David W; Reise, Karsten

2007-01-01

Spatial heterogeneities in the abundance of free-living organisms as well as in infection levels of their parasites are a common phenomenon, but knowledge on parasitism in invertebrate intermediate hosts in this respect is scarce. We investigated the spatial pattern of four dominant trematode species which utilize a common intertidal bivalve, the cockle Cerastoderma edule, as second intermediate host in their life cycles. Sampling of cockles from the same cohort at 15 sites in the northern Wadden Sea (North Sea) over a distance of 50 km revealed a conspicuous spatial heterogeneity in infection levels in all four species over the total sample as well as among and within sampling sites. Whereas multiple regression analyses indicated the density of first intermediate upstream hosts to be the strongest determinant of infection levels in cockles, the situation within sites was more complex with no single strong predictor variable. However, host size was positively and host density negatively correlated with infection levels and there was an indication of differential susceptibility of cockle hosts. Small-scale differences in physical properties of the habitat in the form of residual water at low tide resulted in increased infection levels of cockles which we experimentally transferred into pools. A complex interplay of these factors may be responsible for within-site heterogeneities. At larger spatial scales, these factors may be overridden by the strong effect of upstream hosts. In contrast to first intermediate trematode hosts, there was no indication for inter-specific interactions. In other terms, the recruitment of trematodes in second intermediate hosts seems to be largely controlled by pre-settlement processes both among and within host populations.

Investigation on Constrained Matrix Factorization for Hyperspectral Image Analysis

DTIC Science & Technology

2005-07-25

analysis. Keywords: matrix factorization; nonnegative matrix factorization; linear mixture model ; unsupervised linear unmixing; hyperspectral imagery...spatial resolution permits different materials present in the area covered by a single pixel. The linear mixture model says that a pixel reflectance in...in r. In the linear mixture model , r is considered as the linear mixture of m1, m2, …, mP as nMαr += (1) where n is included to account for

Examining the freezing process of an intermediate bulk containing an industrially relevant protein

PubMed Central

Reinsch, Holger; Spadiut, Oliver; Heidingsfelder, Johannes; Herwig, Christoph

2015-01-01

Numerous biopharmaceuticals are produced in recombinant microorganisms in the controlled environment of a bioreactor, a process known as Upstream Process. To minimize product loss due to physico-chemical and enzymatic degradation, the Upstream Process should be directly followed by product purification, known as Downstream Process. However, the Downstream Process can be technologically complex and time-consuming which is why Upstream and Downstream Process usually have to be decoupled temporally and spatially. Consequently, the product obtained after the Upstream Process, known as intermediate bulk, has to be stored. In those circumstances, a freezing procedure is often performed to prevent product loss. However, the freezing process itself is inseparably linked to physico-chemical changes of the intermediate bulk which may in turn damage the product. The present study analysed the behaviour of a Tris-buffered intermediate bulk containing a biopharmaceutically relevant protein during a bottle freezing process. Major damaging mechanisms, like the spatiotemporal redistribution of ion concentrations and pH, and their influence on product stability were investigated. Summarizing, we show the complex events which happen in an intermediate bulk during freezing and explain the different causes for product loss. PMID:25765305

Influence of excited state spatial distributions on plasma diagnostics: Atmospheric pressure laser-induced He-H2 plasma

NASA Astrophysics Data System (ADS)

Monfared, Shabnam K.; Hüwel, Lutz

2012-10-01

Atmospheric pressure plasmas in helium-hydrogen mixtures with H2 molar concentrations ranging from 0.13% to 19.7% were investigated at times from 1 to 25 μs after formation by a Q-switched Nd:YAG laser. Spatially integrated electron density values are obtained using time resolved optical emission spectroscopic techniques. Depending on mixture concentration and delay time, electron densities vary from almost 1017 cm-3 to about 1014 cm-3. Helium based results agree reasonably well with each other, as do values extracted from the Hα and Hβ emission lines. However, in particular for delays up to about 7 μs and in mixtures with less than 1% hydrogen, large discrepancies are observed between results obtained from the two species. Differences decrease with increasing hydrogen partial pressure and/or increasing delay time. In mixtures with molecular hydrogen fraction of 7% or more, all methods yield electron densities that are in good agreement. These findings seemingly contradict the well-established idea that addition of small amounts of hydrogen for diagnostic purposes does not perturb the plasma. Using Abel inversion analysis of the experimental data and a semi-empirical numerical model, we demonstrate that the major part of the detected discrepancies can be traced to differences in the spatial distributions of excited helium and hydrogen neutrals. The model yields spatially resolved emission intensities and electron density profiles that are in qualitative agreement with experiment. For the test case of a 1% H2 mixture at 5 μs delay, our model suggests that high electron temperatures cause an elevated degree of ionization and thus a reduction of excited hydrogen concentration relative to that of helium near the plasma center. As a result, spatially integrated analysis of hydrogen emission lines leads to oversampling of the plasma perimeter and thus to lower electron density values compared to those obtained from helium lines.

Color surface-flow visualization of fin-generated shock wave boundary-layer interactions

NASA Technical Reports Server (NTRS)

Lu, F. K.; Settles, G. S.

1990-01-01

Kerosene-lampblack mixtures with addition of a ground colored chalk were used in an experiment on visualizing surface flows of swept shock boundary-layer interactions. The results show that contrasting colors intensify the visualization of different regions of the interaction surface, and help the eye in following the fine streaks to locate the upstream influence. The study confirms observations of the separation occurring at shock strength below accepted values. The superiority of the reported technique over the previous monochrome technique is demonstrated.

Color surface-flow visualization of fin-generated shock wave boundary-layer interactions

NASA Astrophysics Data System (ADS)

Lu, F. K.; Settles, G. S.

1990-03-01

Kerosene-lampblack mixtures with addition of a ground colored chalk were used in an experiment on visualizing surface flows of swept shock boundary-layer interactions. The results show that contrasting colors intensify the visualization of different regions of the interaction surface, and help the eye in following the fine streaks to locate the upstream influence. The study confirms observations of the separation occurring at shock strength below accepted values. The superiority of the reported technique over the previous monochrome technique is demonstrated.

Models of electroosmotic flow in micro- and nanochannels

NASA Astrophysics Data System (ADS)

Zheng, Z.; Conlisk, A. T.; Sadr, R.; Yoda, M.

2003-11-01

Understanding electrooosmotic flow (EOF) is essential for developing efficient drug delivery and rapid biomolecular analysis devices given the extremely high pressure gradients required to drive flows through channels smaller than about 10 μ m. We consider fully-developed and steady EOF in one- and two-dimensional micro- and nanochannel geometries. The fluid, which is assumed to behave as a continuum, is a mixture of a neutral solvent such as water and a salt where the ionic species are entirely dissociated. The model can be used to analyze EOF where the opposite channel walls are oppositely charged and EOF with arbitrary electric double layer thickness. Unlike most previous models which assume a wall ζ -potential a priori, the model calculates the boundary conditions for the (wall) mole fractions using the equilibrium electrochemical potential in the upstream reservoir. We can therefore predict the wall ζ -potential, and calculate EOF with spatially and temporally varying wall ζ -potentials. The model results for electroosmotic mobility and volumetric flow rate are compared with those from three independent experimental datasets, and found to be in good agreement with all three sets of experimental data for channel sizes ranging from O(10 nm) to O(10 μ m). The limits of the continuum theory for EOF are discussed.

Effect of Jet Injection Angle and Number of Jets on Mixing and Emissions From a Reacting Crossflow at Atmospheric Pressure

NASA Technical Reports Server (NTRS)

St.John, D.; Samuelsen, G. S.

2000-01-01

The mixing of air jets into hot, fuel-rich products of a gas turbine primary zone is an important step in staged combustion. Often referred to as "quick quench," the mixing occurs with chemical conversion and substantial heat release. An experiment has been designed to simulate and study this process, and the effect of varying the entry angle (0 deg, 22.5 deg and 45 deg from normal) and number of the air jets (7, 9, and 11) into the main flow, while holding the jet-to-crossflow mass-low ratio, MR, and momentum-flux ratio, J, constant (MR = 2.5;J = 25). The geometry is a crossflow confined in a cylindrical duct with side-wall injection of jets issuing from orifices equally spaced around the perimeter. A specially designed reactor, operating on propane, presents a uniform mixture to a module containing air jet injection tubes that can be changed to vary orifice geometry. Species concentrations of O2, CO, CO2, NO(x) and HC were obtained one duct diameter upstream (in the rich zone), and primarily one duct radius downstream. From this information, penetration of the jet, the spatial extent of chemical reaction, mixing, and the optimum jet injection angle and number of jets can be deduced.

What’s Upstream? GIS’s critical role in developing nutrient reference conditions for estuaries - April 2, 2015

EPA Science Inventory

Eutrophication due to excess levels of nitrogen and phosphorus can seriously impair ecological function in estuaries. Protective criteria for nutrients are difficult to establish because the source can vary spatially and seasonally, originate either from the watershed or the oce...

Spatiotemporal patterns and habitat associations of smallmouth bass (Micropterus dolomieu) invading salmon-rearing habitat

USGS Publications Warehouse

Lawrence, David J.; Olden, Julian D.; Torgersen, Christian E.

2012-01-01

1. Smallmouth bass (Micropterus dolomieu) have been widely introduced to fresh waters throughout the world to promote recreational fishing opportunities. In the Pacific Northwest (U.S.A.), upstream range expansions of predatory bass, especially into subyearling salmon-rearing grounds, are of increasing conservation concern, yet have received little scientific inquiry. Understanding the habitat characteristics that influence bass distribution and the timing and extent of bass and salmon overlap will facilitate the development of management strategies that mitigate potential ecological impacts of bass.2. We employed a spatially continuous sampling design to determine the extent of bass and subyearling Chinook salmon (Oncorhynchus tshawytscha) sympatry in the North Fork John Day River (NFJDR), a free-flowing river system in the Columbia River Basin that contains an upstream expanding population of non-native bass. Extensive (i.e. 53 km) surveys were conducted over 2 years and during an early and late summer period of each year, because these seasons provide a strong contrast in the river’s water temperature and flow condition. Classification and regression trees were applied to determine the primary habitat correlates of bass abundance at reach and channel-unit scales.3. Our study revealed that bass seasonally occupy up to 22% of the length of the mainstem NFJDR where subyearling Chinook salmon occur, and the primary period of sympatry between these species was in the early summer and not during peak water temperatures in late summer. Where these species co-occurred, bass occupied 60–76% of channel units used by subyearling Chinook salmon in the early summer and 28–46% of the channel units they occupied in the late summer. Because these rearing salmon were well below the gape limitation of bass, this overlap could result in either direct predation or sublethal effects of bass on subyearling Chinook salmon. The upstream extent of bass increased 10–23 km (2009 and 2010, respectively) as stream temperatures seasonally warmed, but subyearling Chinook salmon were also found farther upstream during this time.4. Our multiscale analysis suggests that bass were selecting habitat based on antecedent thermal history at a broad scale, and if satisfactory temperature conditions were met, mesoscale habitat features (i.e. channel-unit type and depth) played an additional role in determining bass abundance. The upstream extent of bass in the late summer corresponded to a high-gradient geomorphic discontinuity in the NFJDR, which probably hindered further upstream movements of bass. The habitat determinants and upstream extent of bass were largely consistent across years, despite marked differences in the magnitude and timing of spring peak flows prior to bass spawning.5. The overriding influence of water temperature on smallmouth bass distribution suggests that managers may be able limit future upstream range expansions of bass into salmon-rearing habitat by concentrating on restoration activities that mitigate climate- or land-use-related stream warming. These management activities could be prioritised to capitalise on survival bottlenecks in the life history of bass and spatially focused on landscape knick points such as high-gradient discontinuities to discourage further upstream movements of bass.

Spatial pattern affects diversity-productivity relationships in experimental meadow communities

NASA Astrophysics Data System (ADS)

Lamošová, Tereza; Doležal, Jiří; Lanta, Vojtěch; Lepš, Jan

2010-05-01

Plant species create aggregations of conspecifics as a consequence of limited seed dispersal, clonal growth and heterogeneous environment. Such intraspecific aggregation increases the importance of intraspecific competition relative to interspecific competition which may slow down competitive exclusion and promote species coexistence. To examine how spatial aggregation impacts the functioning of experimental assemblages of varying species richness, eight perennial grassland species of different growth form were grown in random and aggregated patterns in monocultures, two-, four-, and eight-species mixtures. In mixtures with an aggregated pattern, monospecific clumps were interspecifically segregated. Mixed model ANOVA was used to test (i) how the total productivity and productivity of individual species is affected by the number of species in a mixture, and (ii) how these relationships are affected by spatial pattern of sown plants. The main patterns of productivity response to species richness conform to other studies: non-transgressive overyielding is omnipresent (the productivity of mixtures is higher than the average of its constituent species so that the net diversity, selection and complementarity effects are positive), whereas transgressive overyielding is found only in a minority of cases (average of log(overyielding) being close to zero or negative). The theoretical prediction that plants in a random pattern should produce more than in an aggregated pattern (the distances to neighbours are smaller and consequently the competition among neighbours stronger) was confirmed in monocultures of all the eight species. The situation is more complicated in mixtures, probably as a consequence of complicated interplay between interspecific and intraspecific competition. The most productive species ( Achillea, Holcus, Plantago) were competitively superior and increased their relative productivity with mixture richness. The intraspecific competition of these species is stronger than that of most other species. The aggregated pattern in the full mixture increased the survival of subordinate species, and consequently, we conclude that an aggregated pattern can promote species coexistence (or at least postpone competitive exclusion), particularly in comparison with homogeneously sown mixtures.

Spatial variation of dissolved organic matter composition and characteristics in an urbanized watershed

NASA Astrophysics Data System (ADS)

Hsieh, C.; Li, M.

2013-12-01

Dissolved organic matter (DOM) is a chemically complex mixture of organic polymers that plays an important role in river ecosystems and originates from various sources. Some DOMs are autochthonous originating through phytoplankton and microbial activity in situ. On the other hand, some DOMs are allochthonous which are transported to river from the surrounding watershed by natural or anthropogenic activities. The studies of DOM in river are usually conducted at the watershed scale; however, factors of local spatial scale affecting DOM composition also need to take into consideration for the study of DOM in an urbanized watershed. Through increasing urbanization, changes in a watershed occur not only in land use patterns but also in river channel characteristics. The objective of this study is to investigate effects of different river channel characteristics and patterns on changes in DOM source and composition. In this study, we chose three tributaries of Tamsui river in Taiwan according to its land use pattern and river channel characteristics. At each sub-basin, river water samples were sampled from three study sites. River water DOM was measured by using optical measurements of UV absorption and fluorescence spectroscopy. Water samples were also collected for laboratory analysis of different water quality parameters. From our study sites, they are from three sub-basins which are in the similar physical environments but with different river channel types: the highly channelized Keelung river, the less channelized Xindian river, and less channelized Dahan river with five human-made wetlands. From the upstream to the urbanized downstream, composition of DOM showed variation among different sampled sites. In all three sub-basins, the trends of 5-day biochemical oxygen demand (BOD5) and suspended solids (SS) are also different. The changes in DOM source and composition as well as different water quality parmaters occur at the local spatial-scale depended on their river channel characters in urbanized watersheds. Based on our result, it indicates river channel characters which can have effects on biogeochemical processes of DOM. This knowledge can help us in understanding biogeochemical processes controlled or manipulated by anthropogenic activities at different spatial scales, and help us to make an integrative river health management in a watershed.

Software for analysis of chemical mixtures--composition, occurrence, distribution, and possible toxicity

USGS Publications Warehouse

Scott, Jonathon C.; Skach, Kenneth A.; Toccalino, Patricia L.

2013-01-01

The composition, occurrence, distribution, and possible toxicity of chemical mixtures in the environment are research concerns of the U.S. Geological Survey and others. The presence of specific chemical mixtures may serve as indicators of natural phenomena or human-caused events. Chemical mixtures may also have ecological, industrial, geochemical, or toxicological effects. Chemical-mixture occurrences vary by analyte composition and concentration. Four related computer programs have been developed by the National Water-Quality Assessment Program of the U.S. Geological Survey for research of chemical-mixture compositions, occurrences, distributions, and possible toxicities. The compositions and occurrences are identified for the user-supplied data, and therefore the resultant counts are constrained by the user’s choices for the selection of chemicals, reporting limits for the analytical methods, spatial coverage, and time span for the data supplied. The distribution of chemical mixtures may be spatial, temporal, and (or) related to some other variable, such as chemical usage. Possible toxicities optionally are estimated from user-supplied benchmark data. The software for the analysis of chemical mixtures described in this report is designed to work with chemical-analysis data files retrieved from the U.S. Geological Survey National Water Information System but can also be used with appropriately formatted data from other sources. Installation and usage of the mixture software are documented. This mixture software was designed to function with minimal changes on a variety of computer-operating systems. To obtain the software described herein and other U.S. Geological Survey software, visit http://water.usgs.gov/software/.

Divergence in Morris Water Maze-Based Cognitive Performance under Chronic Stress Is Associated with the Hippocampal Whole Transcriptomic Modification in Mice

PubMed Central

Jung, Seung H.; Brownlow, Milene L.; Pellegrini, Matteo; Jankord, Ryan

2017-01-01

Individual susceptibility determines the magnitude of stress effects on cognitive function. The hippocampus, a brain region of memory consolidation, is vulnerable to stressful environments, and the impact of stress on hippocampus may determine individual variability in cognitive performance. Therefore, the purpose of this study was to define the relationship between the divergence in spatial memory performance under chronically unpredictable stress and an associated transcriptomic alternation in hippocampus, the brain region of spatial memory consolidation. Multiple strains of BXD (B6 × D2) recombinant inbred mice went through a 4-week chronic variable stress (CVS) paradigm, and the Morris water maze (MWM) test was conducted during the last week of CVS to assess hippocampal-dependent spatial memory performance and grouped animals into low and high performing groups based on the cognitive performance. Using hippocampal whole transcriptome RNA-sequencing data, differential expression, PANTHER analysis, WGCNA, Ingenuity's upstream regulator analysis in the Ingenuity Pathway Analysis® and phenotype association analysis were conducted. Our data identified multiple genes and pathways that were significantly associated with chronic stress-associated cognitive modification and the divergence in hippocampal dependent memory performance under chronic stress. Biological pathways associated with memory performance following chronic stress included metabolism, neurotransmitter and receptor regulation, immune response and cellular process. The Ingenuity's upstream regulator analysis identified 247 upstream transcriptional regulators from 16 different molecule types. Transcripts predictive of cognitive performance under high stress included genes that are associated with a high occurrence of Alzheimer's and cognitive impairments (e.g., Ncl, Eno1, Scn9a, Slc19a3, Ncstn, Fos, Eif4h, Copa, etc.). Our results show that the variable effects of chronic stress on the hippocampal transcriptome are related to the ability to complete the MWM task and that the modulations of specific pathways are indicative of hippocampal dependent memory performance. Thus, the divergence in spatial memory performance following chronic stress is related to the unique pattern of gene expression within the hippocampus. PMID:28912681

Urban Wastewater Impacts on the Spatial Distribution of Solutes and Microbial Constituents in the Musi River, India

NASA Astrophysics Data System (ADS)

Ensink, J.; Scott, C. A.; Cairncross, S.

2006-05-01

Wastewater discharge from expanding urban centers deteriorates the quality of receiving waters, a trend that has management and investment implications for cities around the world. This paper presents the results of a 14-month water quality evaluation over a 40-km longitudinal profile downstream of the city of Hyderabad, India (population 7 million) on the Musi River, a tributary to the Krishna River. Upstream to downstream improvements in Musi water quality for microbial constituents (nematode egg, faecal coliform), dissolved oxygen, and nitrate are attributed to natural attenuation processes (dilution, die-off, sedimentation and biological processes) coupled with the effects of in-stream hydraulic infrastructure (weirs and reservoirs). Conversely, upstream to downstream increases in total dissolved solids concentrations are caused by off- stream infrastructure and agricultural water use resulting in crop evapotranspiration and increased solute concentration in the return flow of irrigation diverted upstream in the wastewater system. Future water quality management challenges resulting from rampant urban growth, particularly in developing countries, are discussed.

Spatial extent and dynamics of dam impacts on tropical island freshwater fish assemblages

USGS Publications Warehouse

Cooney, Patrick B.; Kwak, Thomas J.

2013-01-01

Habitat connectivity is vital to the persistence of migratory fishes. Native tropical island stream fish assemblages composed of diadromous species require intact corridors between ocean and riverine habitats. High dams block fish migration, but low-head artificial barriers are more widespread and are rarely assessed for impacts. Among all 46 drainages in Puerto Rico, we identified and surveyed 335 artificial barriers that hinder fish migration to 74.5% of the upstream habitat. We also surveyed occupancy of native diadromous fishes (Anguillidae, Eleotridae, Gobiidae, and Mugilidae) in 118 river reaches. Occupancy models demonstrated that barriers 2 meters (m) high restricted nongoby fish migration and extirpated those fish upstream of 4-m barriers. Gobies are adapted to climbing and are restricted by 12-m barriers and extirpated upstream of 32-m barriers. Our findings quantitatively illustrate the extensive impact of low-head structures on island stream fauna and provide guidance for natural resource management, habitat restoration, and water development strategies.

Crystal structure of a transcribing RNA Polymerase II complex reveals a complete transcription bubble

PubMed Central

Barnes, Christopher O.; Calero, Monica; Malik, Indranil; Graham, Brian W.; Spahr, Henrik; Lin, Guowu; Cohen, Aina; Brown, Ian S.; Zhang, Qiangmin; Pullara, Filippo; Trakselis, Michael A.; Kaplan, Craig D.; Calero, Guillermo

2015-01-01

Summary Notwithstanding numerous published structures of RNA Polymerase II (Pol II), structural details of Pol II engaging a complete nucleic acid scaffold have been lacking. Here, we report the structures of TFIIF stabilized transcribing Pol II complexes, revealing the upstream duplex and full transcription bubble. The upstream duplex lies over a wedge-shaped loop from Rpb2 that engages its minor groove, providing part of the structural framework for DNA tracking during elongation. At the upstream transcription bubble fork, rudder and fork loop-1 residues spatially coordinate strand annealing and the nascent RNA transcript. At the downstream fork, a network of Pol II interactions with the non-template strand forms a rigid domain with the Trigger Loop (TL), allowing visualization of its open state. Overall, our observations suggest that “open/closed” conformational transitions of the TL may be linked to interactions with the non-template strand, possibly in a synchronized ratcheting manner conducive to polymerase translocation. PMID:26186291

Intimal cushions and endothelial nuclear elongation around mouse aortic branches and their spatial correspondence with patterns of lipid deposition

PubMed Central

Bond, Andrew R.; Ni, Chih-Wen; Jo, Hanjoong

2010-01-01

Spatial variation in hemodynamic stresses acting on the arterial wall may explain the nonuniform distribution of atherosclerosis. In thoracic aortas of LDL receptor/apolipoprotein E double knockout mice, lesions develop preferentially around the entire circumference of intercostal branch ostia, regardless of age, with the highest prevalence occurring upstream. Additional chevron-shaped lesions occur further upstream of the ostia. This pattern differs from the age-related ones occurring in people and rabbits. In the present study, patterns of near-wall blood flow around intercostal ostia in wild-type mice were estimated from the morphology of endothelial nuclei, which were shown in vitro to elongate in response to elevated shear stress and to align with the flow, and wall structure was assessed from confocal and scanning electron microscopy. A triangular intimal cushion surrounded the upstream part of most ostia. Nuclear length-to-width ratios were lowest over this cushion and highest at the sides of branches, regardless of age. Nuclear orientations were consistent with flow diverging around the branch. The pattern of nuclear morphology differed from the age-related ones observed in rabbits. The intimal cushion and the distribution of shear stress inferred from these observations can partly account for the pattern of lesions observed in knockout mice. Nuclear elongation in nonbranch regions was approximately constant across animals of different size, demonstrating the existence of a mechanism by which endothelial cells compensate for the dependence of mean aortic wall shear stress on body mass. PMID:19933414

Water withdrawals reduce native fish diversity across the sunbelt of the US

NASA Astrophysics Data System (ADS)

Sabo, J. L.; Bowling, L. C.; Roath, J.; Sinha, T.; Kominoski, J.; Fuller, P.

2012-12-01

Water withdrawals for urban, industrial and agricultural uses are known to have negative effects on freshwater biodiversity, but this conclusion is based largely on a small number of place based studies. In this talk we will present results from a continental scale analysis of water withdrawals on the species richness of native and non-native fishes in the coterminous US. To do this we compiled data from the USGS on water withdrawals and the species richness of non-native fishes. We obtained data on the native fish species richness from NatureServe's native fish database. We also compiled spatial data on cropland area and urban impervious surfaces. Finally, we used gridded estimates of streamflow from the Variable Infiltration Capacity model and a routing model to estimate streamflow (less upstream water withdrawal). We estimate the water stress index (WSI) as withdrawals standardized by streamflow (local and upstream deliveries) and use this as a metric of sustainability of human water use. All data were compiled at the spatial resolution of 8-digit hydrologic unit code hydrologic accounting units. Our key finding is that human water use (WSI)--and not impervious surfaces or cropland area--has a strong negative effect on native, but not non-native biodiversity in rivers. This result was robust across the US sunbelt but weaker across the coterminous US. Our result suggests that the effects of cities and farms on native freshwater fauna are outweighed by the upstream and cross-basin extraction of water to support these land uses.

Shifts of environmental and phytoplankton variables in a regulated river: A spatial-driven analysis.

PubMed

Sabater-Liesa, Laia; Ginebreda, Antoni; Barceló, Damià

2018-06-18

The longitudinal structure of the environmental and phytoplankton variables was investigated in the Ebro River (NE Spain), which is heavily affected by water abstraction and regulation. A first exploration indicated that the phytoplankton community did not resist the impact of reservoirs and barely recovered downstream of them. The spatial analysis showed that the responses of the phytoplankton and environmental variables were not uniform. The two set of variables revealed spatial variability discontinuities and river fragmentation upstream and downstream from the reservoirs. Reservoirs caused the replacement of spatially heterogeneous habitats by homogeneous spatially distributed water bodies, these new environmental conditions downstream benefiting the opportunist and cosmopolitan algal taxa. The application of a spatial auto-regression model to algal biomass (chlorophyll-a) permitted to capture the relevance and contribution of extra-local influences in the river ecosystem. Copyright © 2018 The Authors. Published by Elsevier B.V. All rights reserved.

A spatial model to aggregate point-source and nonpoint-source water-quality data for large areas

USGS Publications Warehouse

White, D.A.; Smith, R.A.; Price, C.V.; Alexander, R.B.; Robinson, K.W.

1992-01-01

More objective and consistent methods are needed to assess water quality for large areas. A spatial model, one that capitalizes on the topologic relationships among spatial entities, to aggregate pollution sources from upstream drainage areas is described that can be implemented on land surfaces having heterogeneous water-pollution effects. An infrastructure of stream networks and drainage basins, derived from 1:250,000-scale digital-elevation models, define the hydrologic system in this spatial model. The spatial relationships between point- and nonpoint pollution sources and measurement locations are referenced to the hydrologic infrastructure with the aid of a geographic information system. A maximum-branching algorithm has been developed to simulate the effects of distance from a pollutant source to an arbitrary downstream location, a function traditionally employed in deterministic water quality models. ?? 1992.

Phytoestrogens and mycotoxins in Iowa streams: An examination of underinvestigated compounds in agricultural basins

USGS Publications Warehouse

Kolpin, Dana W.; Hoerger, Corinne C.; Meyer, Michael T.; Wettstein, Felix E.; Hubbard, Laura E.; Bucheli, Thomas D.

2010-01-01

This study provides the first broad-scale investigation on the spatial and temporal occurrence of phytoestrogens and mycotoxins in streams in the United States. Fifteen stream sites across Iowa were sampled five times throughout the 2008 growing season to capture a range of climatic and crop-growth conditions. Basin size upstream from sampling sites ranged from 7 km2 to >836,000 km2 Atrazine (herbicide) also was measured in all samples as a frame-of-reference agriculturally derived contaminant. Target compounds were frequently detected in stream samples: atrazine (100%), formononetin (80%), equol (45%), deoxynivalenol (43%), daidzein (32%), biochanin A (23%), zearalenone (13%), and genistein (11%). The nearly ubiquitous detection of formononetin (isoflavone) suggests a widespread agricultural source, as one would expect with the intense row crop and livestock production present across Iowa. Conversely, the less spatially widespread detections of deoxynivalenol (mycotoxin) suggest a more variable source due to the required combination of proper host and proper temperature and moisture conditions necessary to promote Fusarium spp. infections. Although atrazine concentrations commonly exceeded 100 ng L-1 (42/75 measurements), only deoxynivalenol (6/56 measurements) had concentrations that occasionally exceeded this level. Temporal patterns in concentrations varied substantially between atrazine, formononetin, and deoxynivalenol, as one would expect for contaminants with different source inputs and processes of formation and degradation. The greatest phytoestrogen and mycotoxin concentrations were observed during spring snowmelt conditions. Phytoestrogens and mycotoxins were detected at all sampling sites regardless of basin size. The ecotoxicological effects from long-term, low-level exposures to phytoestrogens and mycotoxins or complex chemicals mixtures including these compounds that commonly take place in surface water are poorly understood and have yet to be systematically investigated in environmental studies.

Phytoestrogens and mycotoxins in Iowa streams: An examination of underinvestigated compounds in agricultural basins

USGS Publications Warehouse

Kolpin, D.W.; Hoerger, C.C.; Meyer, M.T.; Wettstein, F.E.; Hubbard, L.E.; Bucheli, T.D.

2010-01-01

This study provides the first broad-scale investigation on the spatial and temporal occurrence of phytoestrogens and mycotoxins in streams in the United States. Fifteen stream sites across Iowa were sampled five times throughout the 2008 growing season to capture a range of climatic and crop-growth conditions. Basin size upstream from sampling sites ranged from 7 km2 to >836,000 km2. Atrazine (herbicide) also was measured in all samples as a frame-ofreference agriculturally derived contaminant. Target compounds were frequently detected in stream samples: atrazine (100%), formononetin (80%), equol (45%), deoxynivalenol (43%), daidzein (32%), biochanin A (23%), zearalenone (13%), and genistein (11%). Th e nearly ubiquitous detection of formononetin (isoflavone) suggests a widespread agricultural source, as one would expect with the intense row crop and livestock production present across Iowa. Conversely, the less spatially widespread detections of deoxynivalenol (mycotoxin) suggest a more variable source due to the required combination of proper host and proper temperature and moisture conditions necessary to promote Fusarium spp. infections. Although atrazine concentrations commonly exceeded 100 ng L-1 (42/75 measurements), only deoxynivalenol (6/56 measurements) had concentrations that occasionally exceeded this level. Temporal patterns in concentrations varied substantially between atrazine, formononetin, and deoxynivalenol, as one would expect for contaminants with different source inputs and processes of formation and degradation. The greatest phytoestrogen and mycotoxin concentrations were observed during spring snowmelt conditions. Phytoestrogens and mycotoxins were detected at all sampling sites regardless of basin size. The ecotoxicological effects from long-term, low-level exposures to phytoestrogens and mycotoxins or complex chemicals mixtures including these compounds that commonly take place in surface water are poorly understood and have yet to be systematically investigated in environmental studies. Copyright ?? 2010 by the American Society of Agronomy.

Compound-specific stable carbon isotope composition as a fingerprint for sediment transport: Reproducibility, homogeneity and application in a catchment of the Swiss plateau.

NASA Astrophysics Data System (ADS)

Birkholz, Axel; Niemann, Helge; Alewell, Christine

2014-05-01

A new field for the applications of compound-specific isotope analyses (CSIA) has opened in the recent years. The isotopic signature in fatty acids (FA) can be used to track sediment transport pathways from erosional areas to river systems. In this approach distinct FA d13C values of even numbered saturated and/or unsaturated FAs from soils are traced in suspended river sediments, ie. the place of deposition. CSIA has been shown to be particularly useful in catchment areas with C4 plant crops because, compared to the regularly occurring C3-plants, they are (naturally) depleted in 13C. However, in theory, all plant species even among C3 plants should inherit significant differences in their d13C of FAs. Thus, we tried to differentiate between source areas for suspended sediments from three different land use types: forest (C3 plants), grassland (C3 plants) and arable land (mixture of C3 and C4 plants). Statistical geo software (eg. Isosource) can be used to additionally model the spatial and temporal variability of erosion. We present d13C values of FAs from 8 erosion areas from the Enziwigger catchment of the Swiss plateau (Canton of Lucerne). Each area was assessed through randomised triplicate sampling to test the spatial homogeneity of each one. The homogeneity of a single sample, as well as the reproducibility of our measurements was tested by extracting and analysing the same sample bag in triplicates. We compare compound-specific stable isotope (CSSI) fingerprints of source areas to d13C-values of FAs from suspended sediments of two high-flow events and one base flow period at 3 different sites of the Enziwiger river (upstream, midstream, downstream).

Spread of hybridization between native westslope cutthroat trout, Oncorhynchus clarki lewisi, and nonnative rainbow trout, Oncorhynchus mykiss

USGS Publications Warehouse

Hitt, Nathaniel P.; Frissell, Christopher A.; Muhlfeld, Clint C.; Fred W. Allendorf,

2003-01-01

We examined spatial and temporal patterns of hybridization between native westslope cutthroat trout, Oncorhynchus clarki lewisi, and nonnative rainbow trout, O. mykiss, in streams of the Flathead River system in Montana, U.S.A. We detected hybridization in 24 of 42 sites sampled from 1998 to 2001. We found new Oncorhynchus mykiss introgression in seven of 11 sample populations that were determined to be nonhybridized in 1984. Patterns of spatial autocorrelation and linkage disequilibrium indicated that hybridization is spreading among sites and is advancing primarily via post-F1 hybrids. Although hybridized populations were distributed widely throughout the study area, the genetic contribution from O. mykiss decreased with increasing upstream distance from the Flathead River mainstem, suggesting that O. mykiss introgression is spreading in an upstream direction. The spread of hybridization may be constrained more by demographic than by environmental factors, given that (i) hybridized populations generally encompassed the range of environmental variability in nonhybridized populations, and (ii) hybridization status was more strongly associated with neighborhood statistics than measured environmental gradients.

Longitudinal patterns and response lengths of algae in riverine ecosystems: A model analysis emphasising benthic-pelagic interactions.

PubMed

Jäger, Christoph G; Borchardt, Dietrich

2018-04-07

In riverine ecosystems primary production is principally possible in two habitats: in the benthic layer by sessile algae and in the surface water by planktonic algae being transported downstream. The relevance of these two habitats generally changes along the rivers' continuum. However, analyses of the interaction of algae in these two habitats and their controlling factors in riverine ecosystems are, so far, very rare. We use a simplified advection-diffusion model system combined with ecological process kinetics to analyse the interaction of benthic and planktonic algae and nutrients along idealised streams and rivers at regional to large scales. Because many of the underlying processes affecting algal dynamics are influenced by depth, we focus particularly on the impact of river depth on this interaction. At constant environmental conditions all state variables approach stable spatial equilibria along the river, independent of the boundary conditions at the upstream end. Because our model is very robust against changes of turbulent diffusion and stream velocity, these spatial equilibria can be analysed by a simplified ordinary differential equation (ode) version of our model. This model variant reveals that at shallower river depths, phytoplankton can exist only when it is subsidised by detaching benthic algae, and in turn, at deeper river depths, benthic algae can exist only in low biomasses which are subsidised by sinking planktonic algae. We generalise the spatial dynamics of the model system using different conditions at the upstream end of the model, which mimic various natural or anthropogenic factors (pristine source, dam, inflow of a waste water treatment plant, and dilution from e.g. a tributary) and analyse how these scenarios influence different aspects of the longitudinal spatial dynamics of the full spatial model: the relation of spatial equilibrium to spatial maximum, the distance to the spatial maximum, and the response length. Generally, our results imply that shallow systems recover within significantly shorter distances from spatially distinct disturbances when compared to deep systems, independent of the type of disturbance. Copyright © 2018 The Authors. Published by Elsevier Ltd.. All rights reserved.

Bayesian spatiotemporal crash frequency models with mixture components for space-time interactions.

PubMed

Cheng, Wen; Gill, Gurdiljot Singh; Zhang, Yongping; Cao, Zhong

2018-03-01

The traffic safety research has developed spatiotemporal models to explore the variations in the spatial pattern of crash risk over time. Many studies observed notable benefits associated with the inclusion of spatial and temporal correlation and their interactions. However, the safety literature lacks sufficient research for the comparison of different temporal treatments and their interaction with spatial component. This study developed four spatiotemporal models with varying complexity due to the different temporal treatments such as (I) linear time trend; (II) quadratic time trend; (III) Autoregressive-1 (AR-1); and (IV) time adjacency. Moreover, the study introduced a flexible two-component mixture for the space-time interaction which allows greater flexibility compared to the traditional linear space-time interaction. The mixture component allows the accommodation of global space-time interaction as well as the departures from the overall spatial and temporal risk patterns. This study performed a comprehensive assessment of mixture models based on the diverse criteria pertaining to goodness-of-fit, cross-validation and evaluation based on in-sample data for predictive accuracy of crash estimates. The assessment of model performance in terms of goodness-of-fit clearly established the superiority of the time-adjacency specification which was evidently more complex due to the addition of information borrowed from neighboring years, but this addition of parameters allowed significant advantage at posterior deviance which subsequently benefited overall fit to crash data. The Base models were also developed to study the comparison between the proposed mixture and traditional space-time components for each temporal model. The mixture models consistently outperformed the corresponding Base models due to the advantages of much lower deviance. For cross-validation comparison of predictive accuracy, linear time trend model was adjudged the best as it recorded the highest value of log pseudo marginal likelihood (LPML). Four other evaluation criteria were considered for typical validation using the same data for model development. Under each criterion, observed crash counts were compared with three types of data containing Bayesian estimated, normal predicted, and model replicated ones. The linear model again performed the best in most scenarios except one case of using model replicated data and two cases involving prediction without including random effects. These phenomena indicated the mediocre performance of linear trend when random effects were excluded for evaluation. This might be due to the flexible mixture space-time interaction which can efficiently absorb the residual variability escaping from the predictable part of the model. The comparison of Base and mixture models in terms of prediction accuracy further bolstered the superiority of the mixture models as the mixture ones generated more precise estimated crash counts across all four models, suggesting that the advantages associated with mixture component at model fit were transferable to prediction accuracy. Finally, the residual analysis demonstrated the consistently superior performance of random effect models which validates the importance of incorporating the correlation structures to account for unobserved heterogeneity. Copyright © 2017 Elsevier Ltd. All rights reserved.

Reservoirs override seasonal variability of phytoplankton communities in a regulated Mediterranean river.

PubMed

Tornés, E; Pérez, M C; Durán, C; Sabater, S

2014-03-15

Water hydrology, temperature and transparency, as well as nutrient retention downstream of the reservoirs alter the temporal and spatial distribution patterns of phytoplankton communities in regulated rivers. The seasonal dynamics of phytoplankton communities in the Ebro was analysed in contrasting water flow periods in sections upstream and downstream of three large reservoirs, as well as in an intermediate site. Phytoplankton communities changed in response to seasonal variations in the areas not influenced by the reservoirs, but the phytoplankton distribution downstream of the reservoirs was driven by their particular hydrodynamics. The change in environmental conditions promoted by reservoirs influenced the pattern of replacement between diatoms and green algae of the upstream section. Differences in the phytoplankton community structure, abundance and environmental variables between upstream and downstream sites were maximal during low flow periods. Chlorophytes and dinoflagellates were present during low flow periods upstream of the reservoirs and in the intermediate site. Cocconeis cf. placentula characterized the downstream section, associated to the presence of macrophytes in that section. The present study sheds light on the consequences of river regulation under potential scenarios of climate change, and results could be used to anticipate ecological problems in large regulated rivers under these circumstances. Copyright © 2013 Elsevier B.V. All rights reserved.

Spatial and temporal patterns of micropollutants upstream and downstream of 24 WWTPs across Switzerland

NASA Astrophysics Data System (ADS)

Spycher, Barbara; Deuber, Fabian; Kistler, David; Burdon, Frank; Reyes, Marta; Alder, Alfredo C.; Joss, Adriano; Eggen, Rik; Singer, Heinz; Stamm, Christian

2015-04-01

Treated wastewater is an important source of micropollutants in many streams. These chemicals consist of very diverse set of compounds that may vary in space and time. In order to improve our understanding of such spatio-temporal patterns of micropollutants in surface waters, we compared upstream and downstream locations at 24 sites across the Swiss Plateau and Jura (12 sites in the 2013 campaign, 12 sites during the 2014 campaign). Each site represents the most upstream treatment plant in the corresponding catchment. This survey is part of the interdisciplinary, Eawag-wide research project EcoImpact that aims at elucidating the ecological effects of micropollutants on stream ecosystems. In 2013, a broad analytical screening was applied to samples collected during winter (January) and summer conditions (June). Based in these results, the bi-monthly samples obtained in 2014 were analysed for a set of about 60 selected organic micropollutants and 10 heavy metals. The screening results demonstrate that generally pharmaceuticals, artificial sweeteners and corrosion inhibitors make up the largest part of the organic micropollutants. Pesticides including biocides and plant protection products are also regularly found but at lower concentrations. This presentation will analyse the variability of the micropollutant patterns across the different sites and how upstream conditions and the wastewater composition changes with season.

Unexpected substrate specificity of T4 DNA ligase revealed by in vitro selection

NASA Technical Reports Server (NTRS)

Harada, Kazuo; Orgel, Leslie E.

1993-01-01

We have used in vitro selection techniques to characterize DNA sequences that are ligated efficiently by T4 DNA ligase. We find that the ensemble of selected sequences ligates about 50 times as efficiently as the random mixture of sequences used as the input for selection. Surprisingly many of the selected sequences failed to produce a match at or close to the ligation junction. None of the 20 selected oligomers that we sequenced produced a match two bases upstream from the ligation junction.

Distal regulatory regions restrict the expression of cis-linked genes to the tapetal cells.

PubMed

Franco, Luciana O; de O Manes, Carmem Lara; Hamdi, Said; Sachetto-Martins, Gilberto; de Oliveira, Dulce E

2002-04-24

The oleosin glycine-rich protein genes Atgrp-6, Atgrp-7, and Atgrp-8 occur in clusters in the Arabidopsis genome and are expressed specifically in the tapetum cells. The cis-regulatory regions involved in the tissue-specific gene expression were investigated by fusing different segments of the gene cluster to the uidA reporter gene. Common distal regulatory regions were identified that coordinate expression of the sequential genes. At least two of these genes were regulated spatially by proximal and distal sequences. The cis-acting elements (122 bp upstream of the transcriptional start point) drive the uidA expression to floral tissues, whereas distal 5' upstream regions restrict the gene activity to tapetal cells.

Laboratory upwelled radiance and reflectance spectra of Kerr reservoir sediment waters

NASA Technical Reports Server (NTRS)

Witte, W. G.; Whitlock, C. H.; Morris, W. D.; Gurganus, E. A.

1982-01-01

Reflectance, chromaticity, and several other physical and chemical properties were measured for various water mixtures of bottom sediments taken from two sites at Kerr Reservoir, Virginia. Mixture concentrations ranged from 5 to 1000 ppm by weight of total suspended solids (TSS) in filtered deionized tap water. The two sets of radiance and reflectance spectra obtained were similar in shape and magnitude for comparable values of TSS. Upwelled reflectance was observed to be a nonlinear function of TSS with the degree of curvature a function of wavelength. Sediment from the downstream site contained a greater amount of particulate organic carbon than from the upstream site. No strong conclusions can be made regarding the effects of this difference on the radiance and reflectance spectra. Near-infrared wavelengths appear useful for measuring highly turbid water with concentrations up to 1000 ppm or more. Chromaticity characteristics do not appear useful for monitoring sediment loads above 150 ppm.

Investigation of transient ignition process in a cavity based scramjet combustor using combined ethylene injectors

NASA Astrophysics Data System (ADS)

Liu, Xiao; Cai, Zun; Tong, Yiheng; Zheng, Hongtao

2017-08-01

Large Eddy Simulation (LES) and experiment were employed to investigate the transient ignition and flame propagation process in a rearwall-expansion cavity scramjet combustor using combined fuel injection schemes. The compressible supersonic solver and three ethylene combustion mechanisms were first validated against experimental data and results show in reasonably good agreement. Fuel injection scheme combining transverse and direct injectors in the cavity provides a benefit mixture distribution and could achieve a successful ignition. Four stages are illustrated in detail from both experiment and LES. After forced ignition in the cavity, initial flame kernel propagates upstream towards the cavity front edge and ignites the mixture, which acts as a continuous pilot flame, and then propagates downstream along the cavity shear layer rapidly to the combustor exit. Cavity shear layer flame stabilization mode can be concluded from the heat release rate and local high temperature distribution during the combustion process.

Retigabine ameliorates acute stress-induced impairment of spatial memory retrieval through regulating USP2 signaling pathways in hippocampal CA1 area.

PubMed

Li, Cai; Zhang, Ji; Xu, Haiwei; Chang, Mujun; Lv, Chuntao; Xue, Wenhua; Song, Zhizhen; Zhang, Lizhen; Zhang, Xiaojian; Tian, Xin

2018-06-01

Acute stress could trigger maladaptive changes associated with stress-related cognitive and emotional deficits. Dysfunction of ion channel or receptor in the hippocampal area has been linked to the cognitive deficits induced by stress. It is known that Kv7 channel openers, including FDA-approved drug retigabine, show cognitive protective efficacy. However, the underlying molecular mechanisms remain elusive. Here we showed that exposing adult male rats to acute stress significantly impaired the spatial memory, a cognitive process controlled by the hippocampus. Concomitantly, significantly reduced AMPA receptor expression was found in hippocampal CA1 area from acute stressed rats. This effect relied on the down-regulation of deubiquitinating enzyme USP2 and its upstream regulators (PGC-1α and β-catenin), and the subsequent enhancement of mTOR-related autophagy which is regulated by USP2. These findings suggested that acute stress dampened AMPA receptor expression by controlling USP2-related signaling, which caused the detrimental effect on hippocampus-dependent cognitive processes. We also found that retigabine alleviated acute stress-induced spatial memory retrieval impairment through adjusting the aberrance of USP2, its upstream regulators (PGC-1α, E4BP4 and β-catenin) and its downstream targets (mTOR, autophagy and GluA1). Our results have identified USP2 as a key molecule that mediates stress-induced spatial memory retrieval impairment, which provides a framework for new druggable targets to conceptually treat stress-associated cognitive deficits. Copyright © 2018 Elsevier Ltd. All rights reserved.

High-frequency measurements reveal spatial and temporal patterns of dissolved organic matter in an urban water conveyance.

PubMed

Mihalevich, Bryce A; Horsburgh, Jeffery S; Melcher, Anthony A

2017-10-30

Stormwater runoff in urban areas can contribute high concentrations of dissolved organic matter (DOM) to receiving waters, potentially causing impairment to the aquatic ecosystem of urban streams and downstream water bodies. Compositional changes in DOM due to storm events in forested, agricultural, and urban landscapes have been well studied, but in situ sensors have not been widely applied to monitor stormwater contributions in urbanized areas, leaving the spatial and temporal characteristics of DOM within these systems poorly understood. We deployed fluorescent DOM (FDOM) sensors at upstream and downstream locations within a study reach to characterize the spatial and temporal changes in DOM quantity and sources within an urban water conveyance that receives stormwater runoff. Baseflow FDOM decreased over the summer season as seasonal flows upstream transported less DOM. FDOM fluctuated diurnally, the amplitude of which also declined as the summer season progressed. During storms, FDOM concentrations were rapidly elevated to values orders of magnitude greater than baseflow measurements, with greater concentrations at the downstream monitoring site, revealing high contributions from stormwater outfalls between the two locations. Observations from custom, in situ fluorometers resembled results obtained using laboratory methods for identifying DOM source material and indicated that DOM transitioned to a more microbially derived composition as the summer season progressed, while stormwater contributions contributed DOM from terrestrial sources. Deployment of a mobile sensing platform during varying flow conditions captured spatial changes in DOM concentration and composition and revealed contributions of DOM from outfalls during stormflows that would have otherwise been unobserved.

Functional strategies drive community assembly of stream fishes along environmental gradients and across spatial scales

DOE Office of Scientific and Technical Information (OSTI.GOV)

Troia, Matthew J.; Gido, Keith B.

Trade-offs among functional traits produce multi-trait strategies that shape species interactions with the environment and drive the assembly of local communities from regional species pools. Stream fish communities vary along stream size gradients and among hierarchically structured habitat patches, but little is known about how the dispersion of strategies varies along environmental gradients and across spatial scales. We used null models to quantify the dispersion of reproductive life history, feeding, and locomotion strategies in communities sampled at three spatial scales in a prairie stream network in Kansas, USA. Strategies were generally underdispersed at all spatial scales, corroborating the longstanding notionmore » of abiotic filtering in stream fish communities. We tested for variation in strategy dispersion along a gradient of stream size and between headwater streams draining different ecoregions. Reproductive life history strategies became increasingly underdispersed moving from downstream to upstream, suggesting that abiotic filtering is stronger in headwaters. This pattern was stronger among reaches compared to mesohabitats, supporting the premise that differences in hydrologic regime among reaches filter reproductive life history strategies. Feeding strategies became increasingly underdispersed moving from upstream to downstream, indicating that environmental filters associated with stream size affect the dispersion of feeding and reproductive life history in opposing ways. Weak differences in strategy dispersion were detected between ecoregions, suggesting that different abiotic filters or strategies drive community differences between ecoregions. Lastly, given the pervasiveness of multi-trait strategies in plant and animal communities, we conclude that the assessment of strategy dispersion offers a comprehensive approach for elucidating mechanisms of community assembly.« less

Historic and recent patterns in dissolved oxygen within the Yaquina Estuary (Oregon, USA): Importance of anthropogenic activities and oceanic conditions

EPA Science Inventory

Spatial and temporal patterns of dissolved oxygen (DO) in Yaquina Estuary, Oregon (USA) are examined using historic and recent data. There was a significant increasing trend in DO in the upstream portion of the estuary during the years 1960–1985. Historically, minimum dry season ...

Linking the structures, free volumes, and properties of ionic liquid mixtures† †Electronic supplementary information (ESI) available. See DOI: 10.1039/c7sc01407d

PubMed Central

Brooks, Nicholas J.; Castiglione, Franca; Doherty, Cara M.; Dolan, Andrew; Hill, Anita J.; Hunt, Patricia A.; Matthews, Richard P.; Mauri, Michele; Mele, Andrea; Simonutti, Roberto; Villar-Garcia, Ignacio J.; Weber, Cameron C.

2017-01-01

The formation of ionic liquid (IL) mixtures has been proposed as an approach to rationally fine-tune the physicochemical properties of ILs for a variety of applications. However, the effects of forming such mixtures on the resultant properties of the liquids are only beginning to be understood. Towards a more complete understanding of both the thermodynamics of mixing ILs and the effect of mixing these liquids on their structures and physicochemical properties, the spatial arrangement and free volume of IL mixtures containing the common [C4C1im]+ cation and different anions have been systematically explored using small angle X-ray scattering (SAXS), positron annihilation lifetime spectroscopy (PALS) and 129Xe NMR techniques. Anion size has the greatest effect on the spatial arrangement of the ILs and their mixtures in terms of the size of the non-polar domains and inter-ion distances. It was found that differences in coulombic attraction between oppositely charged ions arising from the distribution of charge density amongst the atoms of the anion also significantly influences these inter-ion distances. PALS and 129Xe NMR results pertaining to the free volume of these mixtures were found to strongly correlate with each other despite the vastly different timescales of these techniques. Furthermore, the excess free volumes calculated from each of these measurements were in excellent agreement with the excess volumes of mixing measured for the IL mixtures investigated. The correspondence of these techniques indicates that the static and dynamic free volume of these liquid mixtures are strongly linked. Consequently, fluxional processes such as hydrogen bonding do not significantly contribute to the free volumes of these liquids compared to the spatial arrangement of ions arising from their size, shape and coulombic attraction. Given the relationship between free volume and transport properties such as viscosity and conductivity, these results provide a link between the structures of IL mixtures, the thermodynamics of mixing and their physicochemical properties. PMID:29619199

Quantifying the extent of river fragmentation by hydropower dams in the Sarapiquí River Basin, Costa Rica

USGS Publications Warehouse

Anderson, Elizabeth P.; Pringle, Catherine M.; Freeman, Mary C.

2008-01-01

Costa Rica has recently experienced a rapid proliferation of dams for hydropower on rivers draining its northern Caribbean slope. In the Sarapiquí River Basin, eight hydropower plants were built between 1990 and 1999 and more projects are either under construction or proposed. The majority of these dams are small (<15 m tall) and operate as water diversion projects.While the potential environmental effects of individual projects are evaluated prior to dam construction, there is a need for consideration of the basin-scale ecological consequences of hydropower development. This study was a first attempt to quantify the extent of river fragmentation by dams in the Sarapiquí River Basin.Using simple spatial analyses, the length of river upstream from dams and the length of de-watered reaches downstream from dams was measured. Results indicated that there are currently 306.8 km of river (9.4% of the network) upstream from eight existing dams in the Sarapiquí River Basin and 30.6 km of rivers (0.9% of the network) with significantly reduced flow downstream from dams. Rivers upstream from dams primarily drain two life zones: Premontane Rain Forest (107.9 km) and Lower Montane Rain Forest (168.2 km).Simple spatial analyses can be used as a predictive or planning tool for considering the effects of future dams in a basin-scale context. In the Sarapiquí River Basin, we recommend that future dam projects be constructed on already dammed rivers to minimize additional river fragmentation and to protect remaining riverine connectivity.

Teleoperated robotic sorting system

DOEpatents

Roos, Charles E.; Sommer, Jr., Edward J.; Parrish, Robert H.; Russell, James R.

2008-06-24

A method and apparatus are disclosed for classifying materials utilizing a computerized touch sensitive screen or other computerized pointing device for operator identification and electronic marking of spatial coordinates of materials to be extracted. An operator positioned at a computerized touch sensitive screen views electronic images of the mixture of materials to be sorted as they are conveyed past a sensor array which transmits sequences of images of the mixture either directly or through a computer to the touch sensitive display screen. The operator manually "touches" objects displayed on the screen to be extracted from the mixture thereby registering the spatial coordinates of the objects within the computer. The computer then tracks the registered objects as they are conveyed and directs automated devices including mechanical means such as air jets, robotic arms, or other mechanical diverters to extract the registered objects.

Teleoperated robotic sorting system

DOEpatents

Roos, Charles E.; Sommer, Edward J.; Parrish, Robert H.; Russell, James R.

2000-01-01

A method and apparatus are disclosed for classifying materials utilizing a computerized touch sensitive screen or other computerized pointing device for operator identification and electronic marking of spatial coordinates of materials to be extracted. An operator positioned at a computerized touch sensitive screen views electronic images of the mixture of materials to be sorted as they are conveyed past a sensor array which transmits sequences of images of the mixture either directly or through a computer to the touch sensitive display screen. The operator manually "touches" objects displayed on the screen to be extracted from the mixture thereby registering the spatial coordinates of the objects within the computer. The computer then tracks the registered objects as they are conveyed and directs automated devices including mechanical means such as air jets, robotic arms, or other mechanical diverters to extract the registered objects.

Solidification of a binary mixture

NASA Technical Reports Server (NTRS)

Antar, B. N.

1982-01-01

The time dependent concentration and temperature profiles of a finite layer of a binary mixture are investigated during solidification. The coupled time dependent Stefan problem is solved numerically using an implicit finite differencing algorithm with the method of lines. Specifically, the temporal operator is approximated via an implicit finite difference operator resulting in a coupled set of ordinary differential equations for the spatial distribution of the temperature and concentration for each time. Since the resulting differential equations set form a boundary value problem with matching conditions at an unknown spatial point, the method of invariant imbedding is used for its solution.

Mixture-Fraction Measurements with Femtosecond-Laser Electronic-Excitation Tagging

NASA Technical Reports Server (NTRS)

Halls, Benjamin R.; Jiang, Naibo; Gord, James R.; Danehy, Paul M.; Roy, Sukesh

2017-01-01

Tracer-free mixture-fraction measurements were demonstrated in a jet using femtosecond-laser electronic-excitation tagging. Measurements were conducted across a turbulent jet at several downstream locations both in a pure-nitrogen jet exiting into an air-nitrogen mixture and in a jet containing an air-nitrogen mixture exiting into pure nitrogen. The signal was calibrated with known concentrations of oxygen in nitrogen. The spatial resolution of the measurement was approx.180 microns. The measurement uncertainty ranged from 5% to 15%, depending on the mixture fraction and location within the beam, under constant temperature and pressure conditions. The measurements agree with a mixture fraction of unity within the potential core of the jet and transition to the self-similar region.

Endosulfan and Cypermethrin Pesticide Mixture Induces Synergistic or Antagonistic Effects on Developmental Exposed Rats Depending on the Analyzed Behavioral or Neurochemical End Points.

PubMed

Gómez-Giménez, Belén; Llansola, Marta; Cabrera-Pastor, Andrea; Hernández-Rabaza, Vicente; Agustí, Ana; Felipo, Vicente

2018-02-21

Exposure to pesticides has been associated with neurodevelopmental toxicity. Usually people are exposed to mixtures of pesticides. However, most studies analyze the effects of individual pesticides. Developmental exposure to mixtures of pesticides may result in additive effects or in antagonistic or synergistic effects. The aim of this work was to compare the effects of developmental exposure of rats to cypermethrin or endosulfan with the effects of its mixture on cognitive and motor function and on some underlying mechanisms. Exposure to individual pesticides or the mixture was from gestational day 7 to postnatal day 21. We analyzed the effects, in males and females, on spatial learning and memory, associative learning, anxiety, motor coordination, and spontaneous motor activity. We also analyzed neuroinflammation and NMDA receptor subunits in hippocampus and extracellular GABA in cerebellum. Exposure to the mixture, but not to individual pesticides, impaired spatial memory in males, associative learning in females, and increased motor activity in males and females. This indicates a synergistic effect of cypermethrin and endolsufan exposure on these end points. In contrast, motor coordination was impaired by individual exposure to endosulfan or cypermethrin, associated with increased extracellular GABA in cerebellum, but these effects were prevented in rats exposed to the mixture, indicating an antagonistic effect of cypermethrin and endolsufan exposure on these end points. The results show different interaction modes (synergism or antagonism) of the pesticides, depending on the end point analyzed and the sex of the rats.

N-mixture models for estimating population size from spatially replicated counts

USGS Publications Warehouse

Royle, J. Andrew

2004-01-01

Spatial replication is a common theme in count surveys of animals. Such surveys often generate sparse count data from which it is difficult to estimate population size while formally accounting for detection probability. In this article, i describe a class of models (n-mixture models) which allow for estimation of population size from such data. The key idea is to view site-specific population sizes, n, as independent random variables distributed according to some mixing distribution (e.g., Poisson). Prior parameters are estimated from the marginal likelihood of the data, having integrated over the prior distribution for n. Carroll and lombard (1985, journal of american statistical association 80, 423-426) proposed a class of estimators based on mixing over a prior distribution for detection probability. Their estimator can be applied in limited settings, but is sensitive to prior parameter values that are fixed a priori. Spatial replication provides additional information regarding the parameters of the prior distribution on n that is exploited by the n-mixture models and which leads to reasonable estimates of abundance from sparse data. A simulation study demonstrates superior operating characteristics (bias, confidence interval coverage) of the n-mixture estimator compared to the caroll and lombard estimator. Both estimators are applied to point count data on six species of birds illustrating the sensitivity to choice of prior on p and substantially different estimates of abundance as a consequence.

Spatial trends of organochlorinated pesticides, polychlorinated biphenyls, and polybrominated diphenyl ethers in Atlantic Anguillid eels.

PubMed

Byer, Jonathan D; Lebeuf, Michel; Alaee, Mehran; Stephen, Brown R; Trottier, Steve; Backus, Sean; Keir, Michael; Couillard, Catherine M; Casselman, John; Hodson, Peter V

2013-02-01

The bioaccumulation of lipophilic contaminants such as polychlorinated biphenyls (PCBs), organochlorine pesticides (OCPs), and polybrominated diphenyl ethers (PBDEs) can result in a reduction in fitness and spawner quality in eels and may be a factor in Anguillid sp. population declines. Contaminant concentrations in eels have been studied extensively in Europe, but data for American eels are severely lacking. Concentrations of PCBs, OCPs, and PBDEs were determined in American eel from eastern Canada and New York, USA, along with European eel from Belgium. Principal component analysis revealed that eels captured in the St. Lawrence estuary were a mixture of upstream migrants from the St. Lawrence River watershed, and fish captured in local tributaries. Contaminant concentrations were dependent on origin, related to the local environment, and were lower than historic values. In Canada, concentrations of OCPs and PCBs in eel tissues were below the Canadian human consumption guidelines for contaminants in fish, indicating that the current risk to consumers is low. However, concentrations of PCBs, total DDT, and mirex in eels from L. Ontario and the upper St. Lawrence R. were above Great Lakes guidelines for the protection of piscivorous predators. Concentrations of penta-BDE homologs exceeded the Canadian guideline for environmental quality in over half of the eels in this study, but concentrations of the other homolog groups were below the guideline. Copyright © 2012 Elsevier Ltd. All rights reserved.

Using major ions and δ15N-NO3(-) to identify nitrate sources and fate in an alluvial aquifer of the Baiyangdian lake watershed, North China Plain.

PubMed

Wang, Shiqin; Tang, Changyuan; Song, Xianfang; Yuan, Ruiqiang; Wang, Qinxue; Zhang, Yinghua

2013-07-01

In semi-arid regions, most human activities occur in alluvial fan areas; however, NO3(-) pollution has greatly threatened the shallow groundwater quality. In this paper, δ(15)N-NO3(-) and multi-tracers were used to identify the origin and fate of NO3(-) in groundwater of the Baiyangdian lake watershed, North China Plain. The investigation was conducted in two typical regions: one is the agricultural area located in the upstream of the watershed and another is the region influenced by urban wastewater in the downstream of the watershed. Results indicate that the high NO3(-) concentrations of the upstream shallow groundwater were sourced from fertilizer and manure or sewage leakage, whilst the mixture and denitrification caused the decrease in the NO3(-) concentration along the flow path of the groundwater. In the downstream, industrial and domestic effluent has a great impact on groundwater quality. The contaminated rivers contributed from 45% to 76% of the total recharge to the groundwater within a distance of 40 m from the river. The mixture fraction of the wastewater declined with the increasing distance away from the river. However, groundwater with NO3(-) concentrations larger than 20 mg l(-1) was only distributed in areas near to the polluted river or the sewage irrigation area. It is revealed that the frontier and depression regions of an alluvial fan in a lake watershed with abundant organics, silt and clay sediments have suitable conditions for denitrification in the downstream.

Evaluation of water-quality characteristics and sampling design for streams in North Dakota, 1970–2008

USGS Publications Warehouse

Galloway, Joel M.; Vecchia, Aldo V.; Vining, Kevin C.; Densmore, Brenda K.; Lundgren, Robert F.

2012-01-01

In response to the need to examine the large amount of historic water-quality data comprehensively across North Dakota and evaluate the efficiency of the State-wide sampling programs, a study was done by the U.S. Geological Survey in cooperation with the North Dakota State Water Commission and the North Dakota Department of Health to describe the water-quality data collected for the various programs and determine an efficient State-wide sampling design for monitoring future water-quality conditions. Although data collected for the North Dakota State Water Commission High-Low Sampling Program, the North Dakota Department of Health Ambient Water-Quality Network, and other projects and programs provide valuable information on the quality of water in streams in North Dakota, the objectives vary among the programs, some of the programs overlap spatially and temporally, and the various sampling designs may not be the most efficient or relevant to the objectives of the individual programs as they have changed through time. One objective of a State-wide sampling program was to evaluate ways to describe the spatial variability of water-quality conditions across the State in the most efficient manner. Weighted least-squares regression analysis was used to relate the average absolute difference between paired downstream and upstream concentrations, expressed as a percent of the average downstream concentration, to the average absolute difference in daily flow between the downstream and upstream pairs, expressed as a percent of the average downstream flow. The analysis showed that a reasonable spatial network would consist of including the most downstream sites in large basins first, followed by the next upstream site(s) that roughly bisect the downstream flows at the first sites, followed by the next upstream site(s) that roughly bisect flows for the second sites. Sampling sites to be included in a potential State-wide network were prioritized into 3 design levels: level 1 (highest priority), level 2 (second priority), and level 3 (third priority). Given the spatial distribution and priority designation (levels 1–3) of sites in the potential spatial network, the next consideration was to determine the appropriate temporal sampling frequency to use for monitoring future water-quality conditions. The time-series model used to detect concentration trends for this report also was used to evaluate sampling designs to monitor future water-quality trends. Sampling designs were evaluated with regard to their sensitivity to detect seasonal trends that occurred during three 4-month seasons—March through June, July through October, and November through February. For the 34 level-1 sites, samples would be collected for major ions, trace metals, nutrients, bacteria, and sediment eight times per year, with samples in January, April (2 samples),May, June, July, August, and October. For the 21 level-2 sites, samples would be collected for major ions, trace metals, and nutrients six times per year (January, April, May, June, August, and October), and for the 26 level-3 sites, samples would be collected for these constituents four times per year (April, June, August, and October).

Evaluating Multipollutant Exposure and Urban Air Quality: Pollutant Interrelationships, Neighborhood Variability, and Nitrogen Dioxide as a Proxy Pollutant

PubMed Central

Levy, Ilan; Mihele, Cristian; Lu, Gang; Narayan, Julie; Brook, Jeffrey R.

2013-01-01

Background: Although urban air pollution is a complex mix containing multiple constituents, studies of the health effects of long-term exposure often focus on a single pollutant as a proxy for the entire mixture. A better understanding of the component pollutant concentrations and interrelationships would be useful in epidemiological studies that exploit spatial differences in exposure by clarifying the extent to which measures of individual pollutants, particularly nitrogen dioxide (NO2), represent spatial patterns in the multipollutant mixture. Objectives: We examined air pollutant concentrations and interrelationships at the intraurban scale to obtain insight into the nature of the urban mixture of air pollutants. Methods: Mobile measurements of 23 air pollutants were taken systematically at high resolution in Montreal, Quebec, Canada, over 34 days in the winter, summer, and autumn of 2009. Results: We observed variability in pollution levels and in the statistical correlations between different pollutants according to season and neighborhood. Nitrogen oxide species (nitric oxide, NO2, nitrogen oxides, and total oxidized nitrogen species) had the highest overall spatial correlations with the suite of pollutants measured. Ultrafine particles and hydrocarbon-like organic aerosol concentration, a derived measure used as a specific indicator of traffic particles, also had very high correlations. Conclusions: Our findings indicate that the multipollutant mix varies considerably throughout the city, both in time and in space, and thus, no single pollutant would be a perfect proxy measure for the entire mix under all circumstances. However, based on overall average spatial correlations with the suite of pollutants measured, nitrogen oxide species appeared to be the best available indicators of spatial variation in exposure to the outdoor urban air pollutant mixture. Citation: Levy I, Mihele C, Lu G, Narayan J, Brook JR. 2014. Evaluating multipollutant exposure and urban air quality: pollutant interrelationships, neighborhood variability, and nitrogen dioxide as a proxy pollutant. Environ Health Perspect 122:65–72; http://dx.doi.org/10.1289/ehp.1306518 PMID:24225648

Flow pattern changes influenced by variation of viscosities of a heterogeneous gas-liquid mixture flow in a vertical channel

DOE Office of Scientific and Technical Information (OSTI.GOV)

Keska, Jerry K.; Hincapie, Juan; Jones, Richard

In the steady-state flow of a heterogeneous mixture such as an air-liquid mixture, the velocity and void fraction are space- and time-dependent parameters. These parameters are the most fundamental in the analysis and description of a multiphase flow. The determination of flow patterns in an objective way is extremely critical, since this is directly related to sudden changes in spatial and temporal changes of the random like characteristic of concentration. Flow patterns can be described by concentration signals in time, amplitude, and frequency domains. Despite the vital importance and countless attempts to solve or incorporate the flow pattern phenomena intomore » multiphase models, it has still been a very challenging topic in the scientific community since the 1940's and has not yet reached a satisfactory solution. This paper reports the experimental results of the impact of fluid viscosity on flow patterns for two-phase flow. Two-phase flow was created in laboratory equipment using air and liquid as phase medium. The liquid properties were changed by using variable concentrations of glycerol in water mixture which generated a wide-range of dynamic viscosities ranging from 1 to 1060 MPa s. The in situ spatial concentration vs. liquid viscosity and airflow velocity of two-phase flow in a vertical ID=50.8 mm pipe were measured using two concomitant computer-aided measurement systems. After acquiring data, the in situ special concentration signals were analyzed in time (spatial concentration and RMS of spatial concentration vs. time), amplitude (PDF and CPDF), and frequency (PSD and CPSD) domains that documented broad flow pattern changes caused by the fluid viscosity and air velocity changes. (author)« less

Interaction of upstream flow distortions with high Mach number cascades

NASA Technical Reports Server (NTRS)

Englert, G. W.

1981-01-01

Features of the interaction of flow distortions, such as gusts and wakes with blade rows of advance type fans and compressors having high tip Mach numbers are modeled. A typical disturbance was assumed to have harmonic time dependence and was described, at a far upstream location, in three orthogonal spatial coordinates by a double Fourier series. It was convected at supersonic relative to a linear cascade described as an unrolled annulus. Conditions were selected so that the component of this velocity parallel to the axis of the turbomachine was subsonic, permitting interaction between blades through the upstream as well as downstream flow media. A strong, nearly normal shock was considered in the blade passages which was allowed curvature and displacement. The flows before and after the shock were linearized relative to uniform mean velocities in their respective regions. Solution of the descriptive equations was by adaption of the Wiener-Hopf technique, enabling a determination of distortion patterns through and downstream of the cascade as well as pressure distributions on the blade and surfaces. Details of interaction of the disturbance with the in-passage shock were discussed. Infuences of amplitude, wave length, and phase of the disturbance on lifts and moments of cascade configurations are presented. Numerical results are clarified by reference to an especially orderly pattern of upstream vertical motion in relation to the cascade parameters.

Spatial prediction of water quality variables along a main river channel, in presence of pollution hotspots.

PubMed

Rizo-Decelis, L D; Pardo-Igúzquiza, E; Andreo, B

2017-12-15

In order to treat and evaluate the available data of water quality and fully exploit monitoring results (e.g. characterize regional patterns, optimize monitoring networks, infer conditions at unmonitored locations, etc.), it is crucial to develop improved and efficient methodologies. Accordingly, estimation of water quality along fluvial ecosystems is a frequent task in environment studies. In this work, a particular case of this problem is examined, namely, the estimation of water quality along a main stem of a large basin (where most anthropic activity takes place), from observational data measured along this river channel. We adapted topological kriging to this case, where each watershed contains all the watersheds of the upstream observed data ("nested support effect"). Data analysis was additionally extended by taking into account the upstream distance to the closest contamination hotspot as an external drift. We propose choosing the best estimation method by cross-validation. The methodological approach in spatial variability modeling may be used for optimizing the water quality monitoring of a given watercourse. The methodology presented is applied to 28 water quality variables measured along the Santiago River in Western Mexico. Copyright © 2017 Elsevier B.V. All rights reserved.

Effects of upstream-biased third-order space correction terms on multidimensional Crowley advection schemes

NASA Technical Reports Server (NTRS)

Schlesinger, R. E.

1985-01-01

The impact of upstream-biased corrections for third-order spatial truncation error on the stability and phase error of the two-dimensional Crowley combined advective scheme with the cross-space term included is analyzed, putting primary emphasis on phase error reduction. The various versions of the Crowley scheme are formally defined, and their stability and phase error characteristics are intercompared using a linear Fourier component analysis patterned after Fromm (1968, 1969). The performances of the schemes under prototype simulation conditions are tested using time-dependent numerical experiments which advect an initially cone-shaped passive scalar distribution in each of three steady nondivergent flows. One such flow is solid rotation, while the other two are diagonal uniform flow and a strongly deformational vortex.

Re-forming supercritical quasi-parallel shocks. II - Mechanism for wave generation and front re-formation

NASA Technical Reports Server (NTRS)

Winske, D.; Thomas, V. A.; Omidi, N.; Quest, K. B.

1990-01-01

This paper continues the study of Thomas et al. (1990) in which hybrid simulations of quasi-parallel shocks were performed in one and two spatial dimensions. To identify the wave generation processes, the electromagnetic structure of the shock is examined by performing a number of one-dimensional hybrid simulations of quasi-parallel shocks for various upstream conditions. In addition, numerical experiments were carried out in which the backstreaming ions were removed from calculations to show their fundamental importance in reformation process. The calculations show that the waves are excited before ions can propagate far enough upstream to generate resonant modes. At some later times, the waves are regenerated at the leading edge of the interface, with properties like those of their initial interactions.

Communication: Control of chemical reactions using electric field gradients.

PubMed

Deshmukh, Shivaraj D; Tsori, Yoav

2016-05-21

We examine theoretically a new idea for spatial and temporal control of chemical reactions. When chemical reactions take place in a mixture of solvents, an external electric field can alter the local mixture composition, thereby accelerating or decelerating the rate of reaction. The spatial distribution of electric field strength can be non-trivial and depends on the arrangement of the electrodes producing it. In the absence of electric field, the mixture is homogeneous and the reaction takes place uniformly in the reactor volume. When an electric field is applied, the solvents separate and the reactants are concentrated in the same phase or separate to different phases, depending on their relative miscibility in the solvents, and this can have a large effect on the kinetics of the reaction. This method could provide an alternative way to control runaway reactions and to increase the reaction rate without using catalysts.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deshmukh, Shivaraj D.; Tsori, Yoav, E-mail: tsori@bgu.ac.il

We examine theoretically a new idea for spatial and temporal control of chemical reactions. When chemical reactions take place in a mixture of solvents, an external electric field can alter the local mixture composition, thereby accelerating or decelerating the rate of reaction. The spatial distribution of electric field strength can be non-trivial and depends on the arrangement of the electrodes producing it. In the absence of electric field, the mixture is homogeneous and the reaction takes place uniformly in the reactor volume. When an electric field is applied, the solvents separate and the reactants are concentrated in the same phasemore » or separate to different phases, depending on their relative miscibility in the solvents, and this can have a large effect on the kinetics of the reaction. This method could provide an alternative way to control runaway reactions and to increase the reaction rate without using catalysts.« less

Fiber-Supported Droplet Combustion. Experiment 32

NASA Technical Reports Server (NTRS)

Dietrich, Daniel L.; Haggard, John B., Jr.; Nayagam, Vedha; Dryer, Frederick L.; Williams, Forman A.; Shaw, Ben D.

1998-01-01

Individual droplets with diameters ranging from about 2 mm to 5 mm were burned under microgravity conditions in air at 1 bar with an ambient temperature of 300 K. Each droplet was tethered by a silicon carbide fiber of 80 mm or 150 mm diameter to keep it in view of video recording, and, in some tests, a forced air flow was applied in a direction parallel to the fiber axis. Methanol, two methanol-water mixtures, two methanol-dodecanol mixtures, and two heptane-hexadecane mixtures were the fuels. Droplet diameters were measured as functions of time and compared with existing theoretical predictions. The prediction that methanol droplets extinguish at diameters that increase with increasing initial droplet diameter is verified by these experiments. In addition, the quasi-steady burning rate constant of the heptane-hexadecane mixtures appears to decrease with increasing droplet diameter; obscuration consistent with very heavy sooting, but without the formation of soot shells, is observed for the largest of these droplets. Forced convective flow around methanol droplets was found to increase the burning rate and to produce a ratio of downstream-to-upstream flame radius that remained constant as the droplet size decreased, a trend in agreement with earlier results obtained at higher convective velocities for smaller droplets having larger flame standoff ratios. There are a number of implications of the experimental results regarding droplet-combustion theory.

Numerical Prediction of Radiation Measurements Taken in the X2 Facility for Mars and Titan Gas Mixtures

NASA Technical Reports Server (NTRS)

Palmer, Grant; Prabhu, Dinesh; Brandis, Aaron; McIntyre, Timothy J.

2011-01-01

Thermochemical relaxation behind a normal shock in Mars and Titan gas mixtures is simulated using a CFD solver, DPLR, for a hemisphere of 1 m radius; the thermochemical relaxation along the stagnation streamline is considered equivalent to the flow behind a normal shock. Flow simulations are performed for a Titan gas mixture (98% N2, 2% CH4 by volume) for shock speeds of 5.7 and 7.6 km/s and pressures ranging from 20 to 1000 Pa, and a Mars gas mixture (96% CO2, and 4% N2 by volume) for a shock speed of 8.6 km/s and freestream pressure of 13 Pa. For each case, the temperatures and number densities of chemical species obtained from the CFD flow predictions are used as an input to a line-by-line radiation code, NEQAIR. The NEQAIR code is then used to compute the spatial distribution of volumetric radiance starting from the shock front to the point where thermochemical equilibrium is nominally established. Computations of volumetric spectral radiance assume Boltzmann distributions over radiatively linked electronic states of atoms and molecules. The results of these simulations are compared against experimental data acquired in the X2 facility at the University of Queensland, Australia. The experimental measurements were taken over a spectral range of 310-450 nm where the dominant contributor to radiation is the CN violet band system. In almost all cases, the present approach of computing the spatial variation of post-shock volumetric radiance by applying NEQAIR along a stagnation line computed using a high-fidelity flow solver with good spatial resolution of the relaxation zone is shown to replicate trends in measured relaxation of radiance for both Mars and Titan gas mixtures.

Life-stage-specific physiology defines invasion extent of a riverine fish

USGS Publications Warehouse

Lawrence, David J.; Beauchamp, David A.; Olden, Julian D.

2015-01-01

Many ecologists have called for mechanism-based investigations to identify the underlying controls on species distributions. Understanding these controls can be especially useful to construct robust predictions of how a species range may change in response to climate change or the extent to which a non-native species may spread in novel environments.Here, we link spatially intensive observations with mechanistic models to illustrate how physiology determines the upstream extent of the aquatic ectotherm smallmouth bass (Micropterus dolomieu) in two headwater rivers.Our results demonstrate that as temperatures become increasingly cold across a downstream to upstream gradient, food consumption in age 0 bass becomes increasingly constrained, and as a result, these fish become growth limited. Sufficient first summer growth of age 0 bass is essential for overwinter survival because young bass must persist from energy reserves accumulated during the summer, and those reserves are determined by body size.Our field data reveal the upstream extent of adult bass reproduction corresponds to a point in the downstream/upstream gradient where cold temperatures impair growth opportunities in young bass. This pattern was repeated in both study streams and explained why bass positioned nests twice as far upstream in the warm compared to the cold stream in the same basin. Placement of spawning nests by adult bass is likely subject to strong evolutionary selection in temperate systems: if bass spawn too far upstream, their young are unlikely to grow large enough to survive the winter. Consumption and growth in older bass (age 3–4) was far less sensitive to temperature. Based on these data, we suggest that temperature-sensitive age 0 bass constrain the upstream distribution limits of bass within temperate streams.In this study, we investigated how temperature-dependent physiology changed through the life history of a species and, in doing so, identified a climate-sensitive life-history stage that likely sets the distributional limits of all other life-history stages. We anticipate the framework developed here could be employed to identify how similar stage-specific environmental sensitivity determines distribution in many other ectothermic species.

Temporal and spatial patterns in vegetation and atmospheric properties from AVIRIS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Roberts, D.A.; Green, R.O.; Adams, J.B.

1997-12-01

Little research has focused on the use of imaging spectrometry for change detection. In this paper, the authors apply Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data to the monitoring of seasonal changes in atmospheric water vapor, liquid water, and surface cover in the vicinity of the Jasper Ridge, CA, for three dates in 1992. Apparent surface reflectance was retrieved and water vapor and liquid water mapped by using a radiative-transfer-based inversion that accounts for spatially variable atmospheres. Spectral mixture analysis (SMA) was used to model reflectance data as mixtures of green vegetation (GV), nonphotosynthetic vegetation (NPV), soil, and shade. Temporal andmore » spatial patterns in endmember fractions and liquid water were compared to the normalized difference vegetation index (NDVI). The reflectance retrieval algorithm was tested by using a temporally invariant target.« less

Analysis of Bose system in spin-orbit coupled Bose-Fermi mixture to induce a spin current of fermions

NASA Astrophysics Data System (ADS)

Sakamoto, R.; Ono, Y.; Hatsuda, R.; Shiina, K.; Arahata, E.; Mori, H.

2018-03-01

We found that a spin current of fermions could be induced in spin-orbit coupled Bose-Fermi mixture at zero temperature. Since spatial change of the spin structure of the bosons is necessary to induce the spin current of the fermions, we analyzed the ground state of the bosons in the mixture system, using a variational method. The obtained phase diagram indicated the presence of a bosonic phase that allowed the fermions to have a spin current.

Impact of Soil Moisture Dynamics on ASAR Observed Backscatters and its Spatial Variability over the Upstream of the Heihe River Basin, China

NASA Astrophysics Data System (ADS)

Wang, Shuguo

2013-01-01

The so called change detection method is a promising way to acquire soil moisture (SM) dynamics dependent on time series of radar backscatter (σ0) observations. The current study is a preceded step for using this method to carry out SM inversion at basin scale, in order to investigate the applicability of the change detection method in the Heihe River Basin, and to inspect the sensitivity of SAR signals to soil moisture variations. At the meantime, a prior knowledge of SM dynamics and land heterogeneities that may contribute to backscatter observations can be obtained. The impact of land surface states on spatial and temporal σ0 variability measured by ASAR has been evaluated in the upstream of the Heihe River Basin, which was one of the foci experimental areas (FEAs) in Watershed Allied Telemetry Experimental Research (WATER). Based on the in situ measurements provided by an automatic meteorological station (AMS) established at the A’rou site and time series of ASAR observations focused on a 1 km2 area, the relationships between the temporal dynamics of σ0 with in situ SM variations, and land heterogeneities of the study area according to the characteristics of spatial variability of σ0, were identified. The in situ measurements of soil moisture and temperature show a very clear seasonal freeze/thaw cycle in the study site. The temporal σ0 evolvement is basically coherent with ground measurements.

Nutrient dynamics and budget with the surface water-groundwater interaction in the tidal river in Japan

NASA Astrophysics Data System (ADS)

Onodera, S.; Saito, M.; Maruyama, Y.; Jin, G.; Miyaoka, K.; Shimizu, Y.

2013-12-01

In coastal megacities, sever groundwater depression and water pollution occurred. These impacts affected to river environment change. Especially, the river mouth area has been deposited the polluted matters. These areas have characteristics of water level fluctuation which causes river water-groundwater interaction and the associated change in dynamics of nutrients. However, these effects on the nutrient transport in tidal reaches and nutrient load to the sea have not been fully evaluated in previous studies. Therefore, we aimed to clarify the characteristics of the nutrient transport with the river water-groundwater interaction in the tidal river of Osaka metropolitan city. We conducted the field survey from the river mouth to the 7km upstream area of Yamato River, which has a length of 68km and a watershed area of 1070 km2. Spatial variations in radon (222Rn) concentrations and the difference of hydraulic potential between river waters and the pore waters suggest that the groundwater discharges to the river channel in the upstream area. In contrast, the river water recharged into the groundwater near the river mouth area. It may be caused by the lowering of groundwater level associated with the excess abstraction of groundwater in the urban area. The result also implies the seawater intrusion would accelerate the salinization of groundwater. The spatial and temporal variations in nutrient concentrations indicate that nitrate-nitrogen (NO3-N) concentrations changed temporally and it negative correlated with dissolved organic nitrogen (DON) concentrations. Inorganic phosphorous (PO4-P) concentrations showed the increasing trend with the increase of the river water level. Based on the mass balance, nutrient reproduction from the river bed was suggested in tidal reach. That was estimated to be 10 % of total nitrogen and 3% of phosphorus loads from the upstream.

Channel evolution on the dammed Elwha River, Washington, USA

USGS Publications Warehouse

Draut, A.E.; Logan, J.B.; Mastin, M.C.

2011-01-01

Like many rivers in the western U.S., the Elwha River, Washington, has changed substantially over the past century in response to natural and human forcing. The lower river is affected by two upstream dams that are slated for removal as part of a major river restoration effort. In preparation for studying the effects of dam removal, we present a comprehensive field and aerial photographic analysis of dam influence on an anabranching, gravel-bed river. Over the past century with the dams in place, loss of the upstream sediment supply has caused spatial variations in the sedimentary and geomorphic character of the lower Elwha River channel. Bed sediment is armored and better sorted than on the naturally evolving bed upstream of the dams. On time scales of flood seasons, the channel immediately below the lower dam is fairly stable, but progresses toward greater mobility downstream such that the lowermost portion of the river responded to a recent 40-year flood with bank erosion and bed-elevation changes on a scale approaching that of the natural channel above the dams. In general, channel mobility in the lowest 4 km of the Elwha River has not decreased substantially with time. Enough fine sediment remains in the floodplain that – given sufficient flood forcing – the channel position, sinuosity, and braiding index change substantially. The processes by which this river accesses new fine sediment below the dams (rapid migration into noncohesive banks and avulsion of new channels) allow it to compensate for loss of upstream sediment supply more readily than would a dammed river with cohesive banks or a more limited supply of alluvium. The planned dam removal will provide a valuable opportunity to evaluate channel response to the future restoration of natural upstream sediment supply.

Seasonal and spatial dynamic of current-use pesticides (CUPs) in an Argentinian watershed.

NASA Astrophysics Data System (ADS)

Perez, Debora; Okada, Elena; Menone, Mirta; Aparicio, Virginia; Costa, Jose Luis

2017-04-01

The Argentinian Pampa region is the major agricultural zone, in which, the agricultural lands are strongly linked to surface waters. However, Argentina has not regulation for most of the current -used pesticides (CUPs) in surface water to protect the aquatic life. The objective of this work was to study the seasonal and spatial variations of CUPs in surface waters of "El Crespo" stream, and to determine the maximum levels reached to evaluate the possible impact on aquatic life. "El Crespo" stream is only influenced by farming activities, with intensive crop systems upstream (US) and extensive livestock production downstream (DS). It is an optimal site for pesticide monitoring studies since there are no urban or industrial inputs into the system. Water samples were collected monthly from October 2014 to October 2015 in the US and DS sites by triplicate using 1 L polypropylene bottles and stored at -20°C until analysis. The samples were analyzed using liquid chromatography coupled to a tandem mass spectrometer (UPLC-MS/MS). The most frequently detected residues (>40%) were glyphosate (GLY) and its metabolite amino methylphosphonic acid (AMPA), atrazine, acetochlor, metolachlor, 2,4-D, metsulfuron methyl, fluorocloridone, imidacloprid, tebuconazole and epoxiconazole, which are used in the crops cultivated in the area (i.e. soybean, potato, maize and wheat). Individual analysis showed that the herbicide GLY and its metabolite AMPA presented seasonal and spatial variations. The highest concentrations of GLY and AMPA were detected in US site during spring 2014 (2.09 ± 0.39 and 1.13 ± 0.56 µg/L, respectively) and in DS during summer 2015 (1.06 ± 1.02 and 0.20 ± 0.23 µg/L). Comparing total CUPs concentration between sites, a significant increase in UP site during spring 2014 (4.03 ± 0.43 µg/L) in relation to DS (1.54 ± 1.17 µg/L) was observed, may be due to pesticide applications during fallow and transport via surface runoff. Data generated in the present research could be used for evaluating the possible impact of pesticide mixtures on aquatic life and for regulation guidelines.

Influences of frozen ground and climate change on hydrological processes in an alpine watershed: A case study in the upstream area of the Hei’he River, Northwest China

USDA-ARS?s Scientific Manuscript database

Frozen soil prevails in cold regions and exerts significant influence on the hydrological cycle. In the context of climate warming, the spatial and temporal dynamics of frozen soil and hydrological processes also will change. How these changes inter-relate is a key challenge in studies of hydrologic...

Interaction Between Spatial and Feature Attention in Posterior Parietal Cortex

PubMed Central

Ibos, Guilhem; Freedman, David J.

2016-01-01

Summary Lateral intraparietal (LIP) neurons encode a vast array of sensory and cognitive variables. Recently, we proposed that the flexibility of feature representations in LIP reflect the bottom-up integration of sensory signals, modulated by feature-based attention (FBA), from upstream feature-selective cortical neurons. Moreover, LIP activity is also strongly modulated by the position of space-based attention (SBA). However, the mechanisms by which SBA and FBA interact to facilitate the representation of task-relevant spatial and non-spatial features in LIP remain unclear. We recorded from LIP neurons during performance of a task which required monkeys to detect specific conjunctions of color, motion-direction, and stimulus position. Here we show that FBA and SBA potentiate each other’s effect in a manner consistent with attention gating the flow of visual information along the cortical visual pathway. Our results suggest that linear bottom-up integrative mechanisms allow LIP neurons to emphasize task-relevant spatial and non-spatial features. PMID:27499082

Interaction between Spatial and Feature Attention in Posterior Parietal Cortex.

PubMed

Ibos, Guilhem; Freedman, David J

2016-08-17

Lateral intraparietal (LIP) neurons encode a vast array of sensory and cognitive variables. Recently, we proposed that the flexibility of feature representations in LIP reflect the bottom-up integration of sensory signals, modulated by feature-based attention (FBA), from upstream feature-selective cortical neurons. Moreover, LIP activity is also strongly modulated by the position of space-based attention (SBA). However, the mechanisms by which SBA and FBA interact to facilitate the representation of task-relevant spatial and non-spatial features in LIP remain unclear. We recorded from LIP neurons during performance of a task that required monkeys to detect specific conjunctions of color, motion direction, and stimulus position. Here we show that FBA and SBA potentiate each other's effect in a manner consistent with attention gating the flow of visual information along the cortical visual pathway. Our results suggest that linear bottom-up integrative mechanisms allow LIP neurons to emphasize task-relevant spatial and non-spatial features. Copyright © 2016 Elsevier Inc. All rights reserved.

Method and apparatus for combinatorial chemistry

DOEpatents

Foote, Robert S.

2007-02-20

A method and apparatus are provided for performing light-directed reactions in spatially addressable channels within a plurality of channels. One aspect of the invention employs photoactivatable reagents in solutions disposed into spatially addressable flow streams to control the parallel synthesis of molecules immobilized within the channels. The reagents may be photoactivated within a subset of channels at the site of immobilized substrate molecules or at a light-addressable site upstream from the substrate molecules. The method and apparatus of the invention find particularly utility in the synthesis of biopolymer arrays, e.g., oligonucleotides, peptides and carbohydrates, and in the combinatorial synthesis of small molecule arrays for drug discovery.

Method and apparatus for combinatorial chemistry

DOEpatents

Foote, Robert S [Oak Ridge, TN

2012-06-05

A method and apparatus are provided for performing light-directed reactions in spatially addressable channels within a plurality of channels. One aspect of the invention employs photoactivatable reagents in solutions disposed into spatially addressable flow streams to control the parallel synthesis of molecules immobilized within the channels. The reagents may be photoactivated within a subset of channels at the site of immobilized substrate molecules or at a light-addressable site upstream from the substrate molecules. The method and apparatus of the invention find particularly utility in the synthesis of biopolymer arrays, e.g., oligonucleotides, peptides and carbohydrates, and in the combinatorial synthesis of small molecule arrays for drug discovery.

Generation of long waves in a fluid flowing over a localized topography at a periodically varying velocity

NASA Astrophysics Data System (ADS)

Ohsugi, Yasuo; Funakoshi, Mitsuaki

2000-05-01

The generation of long waves in a fluid flowing over a localized topography is examined numerically using the forced KdV equation under the assumption that the velocity U of the fluid far from the topography is close to the phase speed of a linear long wave and varies periodically with period T. For T within a few regions, we observe the 1: n entrainment of the wave motion near the topography to period T, in which n upstream-advancing waves are generated in period T. These regions extend and shift to larger T as the average value or amplitude of the variation of U increases. Furthermore, when the entrainment occurs, the spatial region where time-periodic evolution is almost attained extends toward both upstream and downstream directions with increasing time.

Antibiotic resistance of native and faecal bacteria isolated from rivers, reservoirs and sewage treatment facilities in Victoria, south-eastern Australia.

PubMed

Boon, P I; Cattanach, M

1999-03-01

The incidence of resistance to ampicillin, chloramphenicol, kanamycin, nalidixic acid, neomycin and streptomycin was significantly greater (P < 0.001) in native heterotrophic bacteria than in Escherichia coli isolated from a range of sites along the Yarra River in south-eastern Australia. There was no significant difference in the incidence of resistance between native and faecal bacteria to tetracycline. Both groups were almost totally resistant to penicillin. Multivariate analyses indicated little clear spatial pattern in the incidence of resistance in native bacteria from upstream vs downstream sites along the Yarra River. In contrast, E. coli isolated from upstream (rural) sites tended to have a lower incidence of resistance than isolates from downstream (urban) sites. These findings have implications for the use of antibiotic resistance as a bacteriological water quality parameter.

Mitigating agrichemicals from an artificial runoff event using a managed riverine wetland.

PubMed

Lizotte, Richard E; Shields, F Douglas; Murdock, Justin N; Kröger, Robert; Knight, Scott S

2012-06-15

We examined the mitigation efficiency of a managed riverine wetland amended with a mixture of suspended sediment, two nutrients (nitrogen and phosphorus), and three pesticides (atrazine, metolachlor, and permethrin) during a simulated agricultural runoff event. Hydrologic management of the 500 m-long, 25 m-wide riverine wetland was done by adding weirs at both ends. The agrichemical mixture was amended to the wetland at the upstream weir simulating a four-hour, ~1cm rainfall event from a 16ha agricultural field. Water samples (1L) were collected every 30 min within the first 4h, then every 4h until 48 h, and again on days 5, 7, 14, 21, and 28 post-amendment at distances of 0m, 10 m, 40 m, 300 m and 500 m from the amendment point within the wetland for suspended solids, nutrient, and pesticide analyses. Peak sediment, nutrient, and pesticide concentrations occurred within 3 h of amendment at 0m, 10 m, 40 m, and 300 m downstream and showed rapid attenuation of agrichemicals from the water column with 79-98%, 42-98%, and 63-98% decrease in concentrations of sediments, nutrients, and pesticides, respectively, within 48 h. By day 28, all amendments were near or below pre-amendment concentrations. Water samples at 500 m showed no changes in sediment or nutrient concentrations; pesticide concentrations peaked within 48 h but at ≤11% of upstream peak concentrations and had dissipated by day 28. Managed riverine wetlands≥1 ha and with hydraulic residence times of days to weeks can efficiently trap agricultural runoff during moderate (1cm) late-spring and early-summer rainfall events, mitigating impacts to receiving rivers. Published by Elsevier B.V.

Microwave plasma generation of arsine from hydrogen and solid arsenic

NASA Astrophysics Data System (ADS)

Omstead, Thomas R.; Annapragada, Ananth V.; Jensen, Klavs F.

1990-12-01

The generation of arsine from the reactions of hydrogen and elemental arsenic in a microwave plasma reactor is described. The arsenic is evaporated from a solid source upstream and carried into the microwave plasma region by a mixture of hydrogen and argon. Stable reaction products, arsine and diarsine are observed by molecular beam sampled mass spectroscopy along with partially hydrogenated species (e.g., AsH and AsH2). The effect of composition and flow rate of the argon/hydrogen carrier gas mixture on the amount of arsine generated is investigated. The arsine production reaches a maximum for an argon-to-hydrogen ratio of unity indicating that metastable argon species act as energy transfer intermediates in the overall reaction. The generation of arsine and diarsine from easily handled solid arsenic by this technique makes it attractive as a possible arsenic source for the growth of compound semiconductors by low-pressure metalorganic chemical vapor deposition.

Ignition of steel alloys by impact of low-velocity iron/inert particles in gaseous oxygen

NASA Technical Reports Server (NTRS)

Benz, Frank J.; Mcilroy, Kenneth; Williams, Ralph E.

1988-01-01

The ignition of carbon steel and 316 and 304 stainless steels caused by the impact of low-velocity particles (a standard mixture consisting of 2 g of iron and 3 g of inert materials) in gaseous oxygen was investigated using NASA/White Sands Test Facility for the ignition test, and a subsonic particle impact chamber to accelerate the particles that were injected into flowing oxygen upstream of the target specimen. It was found that the oxygen velocities required to ignite the three alloys were the same as that required to ignite the particle mixture. Ignition occurred at oxygen velocities greater than 45 m/sec at 20 to 24 MPa and was found to be independent of pressure between 2 and 30 MPa. Comparison of the present results and the past results from Wegener (1964) with the Compressed Gas Association (CGA) oxygen velocity limits for safe operations indicates that the CGA limits may be excessively conservative at high pressures and too liberal at low pressures.

Coexistence in streams: Do source-sink dynamics allow salamanders to persist with fish predators?

USGS Publications Warehouse

Sepulveda, A.J.; Lowe, W.H.

2011-01-01

Theory suggests that source-sink dynamics can allow coexistence of intraguild predators and prey, but empirical evidence for this coexistence mechanism is limited. We used capture-mark-recapture, genetic methods, and stable isotopes to test whether source-sink dynamics promote coexistence between stream fishes, the intraguild predator, and stream salamanders (Dicamptodon aterrimus), the intraguild prey. Salamander populations from upstream reaches without fish were predicted to maintain or supplement sink populations in downstream reaches with fish. We found instead that downstream reaches with fish were not sinks even though fish consumed salamander larvae-apparent survival, recruitment, and population growth rate did not differ between upstream and downstream reaches. There was also no difference between upstream and downstream reaches in net emigration. We did find that D. aterrimus moved frequently along streams, but believe that this is a response to seasonal habitat changes rather than intraguild predation. Our study provides empirical evidence that local-scale mechanisms are more important than dispersal dynamics to coexistence of streams salamanders and fish. More broadly, it shows the value of empirical data on dispersal and gene flow for distinguishing between local and spatial mechanisms of coexistence. ?? 2011 Springer-Verlag.

Microstructural Analysis and Rheological Modeling of Asphalt Mixtures Containing Recycled Asphalt Materials.

PubMed

Falchetto, Augusto Cannone; Moon, Ki Hoon; Wistuba, Michael P

2014-09-02

The use of recycled materials in pavement construction has seen, over the years, a significant increase closely associated with substantial economic and environmental benefits. During the past decades, many transportation agencies have evaluated the effect of adding Reclaimed Asphalt Pavement (RAP), and, more recently, Recycled Asphalt Shingles (RAS) on the performance of asphalt pavement, while limits were proposed on the amount of recycled materials which can be used. In this paper, the effect of adding RAP and RAS on the microstructural and low temperature properties of asphalt mixtures is investigated using digital image processing (DIP) and modeling of rheological data obtained with the Bending Beam Rheometer (BBR). Detailed information on the internal microstructure of asphalt mixtures is acquired based on digital images of small beam specimens and numerical estimations of spatial correlation functions. It is found that RAP increases the autocorrelation length (ACL) of the spatial distribution of aggregates, asphalt mastic and air voids phases, while an opposite trend is observed when RAS is included. Analogical and semi empirical models are used to back-calculate binder creep stiffness from mixture experimental data. Differences between back-calculated results and experimental data suggest limited or partial blending between new and aged binder.

Microstructural Analysis and Rheological Modeling of Asphalt Mixtures Containing Recycled Asphalt Materials

PubMed Central

Cannone Falchetto, Augusto; Moon, Ki Hoon; Wistuba, Michael P.

2014-01-01

The use of recycled materials in pavement construction has seen, over the years, a significant increase closely associated with substantial economic and environmental benefits. During the past decades, many transportation agencies have evaluated the effect of adding Reclaimed Asphalt Pavement (RAP), and, more recently, Recycled Asphalt Shingles (RAS) on the performance of asphalt pavement, while limits were proposed on the amount of recycled materials which can be used. In this paper, the effect of adding RAP and RAS on the microstructural and low temperature properties of asphalt mixtures is investigated using digital image processing (DIP) and modeling of rheological data obtained with the Bending Beam Rheometer (BBR). Detailed information on the internal microstructure of asphalt mixtures is acquired based on digital images of small beam specimens and numerical estimations of spatial correlation functions. It is found that RAP increases the autocorrelation length (ACL) of the spatial distribution of aggregates, asphalt mastic and air voids phases, while an opposite trend is observed when RAS is included. Analogical and semi empirical models are used to back-calculate binder creep stiffness from mixture experimental data. Differences between back-calculated results and experimental data suggest limited or partial blending between new and aged binder. PMID:28788190

Assessing Jet-Induced Spatial Mixing in a Rich, Reacting Crossflow

NASA Technical Reports Server (NTRS)

Demayo, T. N.; Leong, M. Y.; Samuelsen, G. S.

2004-01-01

In many advanced low NOx gas turbine combustion techniques, such as rich-burn/quick-mix/lean-burn (RQL), jet mixing in a reacting, hot, fuel-rich crossflow plays an important role in minimizing all pollutant emissions and maximizing combustion efficiency. Assessing the degree of mixing and predicting jet penetration is critical to the optimization of the jet injection design strategy. Different passive scalar quantities, including carbon, oxygen, and helium are compared to quantify mixing in an atmospheric RQL combustion rig under reacting conditions. The results show that the O2-based jet mixture fraction underpredicts the C-based mixture fraction due to jet dilution and combustion, whereas the He tracer overpredicts it possibly due to differences in density and diffusivity. The He-method also exhibits significant scatter in the mixture fraction data that can most likely be attributed to differences in gas density and turbulent diffusivity. The jet mixture fraction data were used to evaluate planar spatial unmixedness, which showed good agreement for all three scalars. This investigation suggests that, with further technique refinement, O2 or a He tracer could be used instead of C to determine the extent of reaction and mixing in an RQL combustor.

Unsteady characteristics of low-Re flow past two tandem cylinders

NASA Astrophysics Data System (ADS)

Zhang, Wei; Dou, Hua-Shu; Zhu, Zuchao; Li, Yi

2018-06-01

This study investigated the two-dimensional flow past two tandem circular or square cylinders at Re = 100 and D / d = 4-10, where D is the center-to-center distance and d is the cylinder diameter. Numerical simulation was performed to comparably study the effect of cylinder geometry and spacing on the aerodynamic characteristics, unsteady flow patterns, time-averaged flow characteristics and flow unsteadiness. We also provided the first global linear stability analysis and sensitivity analysis on the physical problem for the potential application of flow control. The objective of this work is to quantitatively identify the effect of the cylinder geometry and spacing on the characteristic quantities. Numerical results reveal that there is wake flow transition for both geometries depending on the spacing. The characteristic quantities, including the time-averaged and fluctuating streamwise velocity and pressure coefficient, are quite similar to that of the single cylinder case for the upstream cylinder, while an entirely different variation pattern is observed for the downstream cylinder. The global linear stability analysis shows that the spatial structure of perturbation is mainly observed in the wake of the downstream cylinder for small spacing, while moves upstream with reduced size and is also observed after the upstream cylinder for large spacing. The sensitivity analysis reflects that the temporal growth rate of perturbation is the most sensitive to the near-wake flow of downstream cylinder for small spacing and upstream cylinder for large spacing.

Predicting recolonization patterns and interactions between potamodromous and anadromous salmonids in response to dam removal in the Elwha River, Washington State, USA

USGS Publications Warehouse

Brenkman, S.J.; Pess, G.R.; Torgersen, C.E.; Kloehn, K.K.; Duda, J.J.; Corbett, S.C.

2008-01-01

The restoration of salmonids in the Elwha River following dam removal will cause interactions between anadromous and potamodromous forms as recolonization occurs in upstream and downstream directions. Anadromous salmonids are expected to recolonize historic habitats, and rainbow trout (Oncorhynchus mykiss) and bull trout (Salvelinus confluentus) isolated above the dams for 90 years are expected to reestablish anadromy. We summarized the distribution and abundance of potamodromous salmonids, determined locations of spawning areas, and mapped natural barriers to fish migration at the watershed scale based on data collected from 1993 to 2006. Rainbow trout were far more abundant than bull trout throughout the watershed and both species were distributed up to river km 71. Spawning locations for bull trout and rainbow trout occurred in areas where we anticipate returning anadromous fish to spawn. Nonnative brook trout were confined to areas between and below the dams, and seasonal velocity barriers are expected to prevent their upstream movements. We hypothesize that the extent of interaction between potamodromous and anadromous salmonids will vary spatially due to natural barriers that will limit upstream-directed recolonization for some species of salmonids. Consequently, most competitive interactions will occur in the main stem and floodplain downstream of river km 25 and in larger tributaries. Understanding future responses of Pacific salmonids after dam removal in the Elwha River depends upon an understanding of existing conditions of the salmonid community upstream of the dams prior to dam removal.

Modelling Spatial Dependence Structures Between Climate Variables by Combining Mixture Models with Copula Models

NASA Astrophysics Data System (ADS)

Khan, F.; Pilz, J.; Spöck, G.

2017-12-01

Spatio-temporal dependence structures play a pivotal role in understanding the meteorological characteristics of a basin or sub-basin. This further affects the hydrological conditions and consequently will provide misleading results if these structures are not taken into account properly. In this study we modeled the spatial dependence structure between climate variables including maximum, minimum temperature and precipitation in the Monsoon dominated region of Pakistan. For temperature, six, and for precipitation four meteorological stations have been considered. For modelling the dependence structure between temperature and precipitation at multiple sites, we utilized C-Vine, D-Vine and Student t-copula models. For temperature, multivariate mixture normal distributions and for precipitation gamma distributions have been used as marginals under the copula models. A comparison was made between C-Vine, D-Vine and Student t-copula by observational and simulated spatial dependence structure to choose an appropriate model for the climate data. The results show that all copula models performed well, however, there are subtle differences in their performances. The copula models captured the patterns of spatial dependence structures between climate variables at multiple meteorological sites, however, the t-copula showed poor performance in reproducing the dependence structure with respect to magnitude. It was observed that important statistics of observed data have been closely approximated except of maximum values for temperature and minimum values for minimum temperature. Probability density functions of simulated data closely follow the probability density functions of observational data for all variables. C and D-Vines are better tools when it comes to modelling the dependence between variables, however, Student t-copulas compete closely for precipitation. Keywords: Copula model, C-Vine, D-Vine, Spatial dependence structure, Monsoon dominated region of Pakistan, Mixture models, EM algorithm.

Spatial Analysis of “Crazy Quilts”, a Class of Potentially Random Aesthetic Artefacts

PubMed Central

Westphal-Fitch, Gesche; Fitch, W. Tecumseh

2013-01-01

Human artefacts in general are highly structured and often display ordering principles such as translational, reflectional or rotational symmetry. In contrast, human artefacts that are intended to appear random and non symmetrical are very rare. Furthermore, many studies show that humans find it extremely difficult to recognize or reproduce truly random patterns or sequences. Here, we attempt to model two-dimensional decorative spatial patterns produced by humans that show no obvious order. “Crazy quilts” represent a historically important style of quilt making that became popular in the 1870s, and lasted about 50 years. Crazy quilts are unusual because unlike most human artefacts, they are specifically intended to appear haphazard and unstructured. We evaluate the degree to which this intention was achieved by using statistical techniques of spatial point pattern analysis to compare crazy quilts with regular quilts from the same region and era and to evaluate the fit of various random distributions to these two quilt classes. We found that the two quilt categories exhibit fundamentally different spatial characteristics: The patch areas of crazy quilts derive from a continuous random distribution, while area distributions of regular quilts consist of Gaussian mixtures. These Gaussian mixtures derive from regular pattern motifs that are repeated and we suggest that such a mixture is a distinctive signature of human-made visual patterns. In contrast, the distribution found in crazy quilts is shared with many other naturally occurring spatial patterns. Centroids of patches in the two quilt classes are spaced differently and in general, crazy quilts but not regular quilts are well-fitted by a random Strauss process. These results indicate that, within the constraints of the quilt format, Victorian quilters indeed achieved their goal of generating random structures. PMID:24066095

Spatial analysis of "crazy quilts", a class of potentially random aesthetic artefacts.

PubMed

Westphal-Fitch, Gesche; Fitch, W Tecumseh

2013-01-01

Human artefacts in general are highly structured and often display ordering principles such as translational, reflectional or rotational symmetry. In contrast, human artefacts that are intended to appear random and non symmetrical are very rare. Furthermore, many studies show that humans find it extremely difficult to recognize or reproduce truly random patterns or sequences. Here, we attempt to model two-dimensional decorative spatial patterns produced by humans that show no obvious order. "Crazy quilts" represent a historically important style of quilt making that became popular in the 1870s, and lasted about 50 years. Crazy quilts are unusual because unlike most human artefacts, they are specifically intended to appear haphazard and unstructured. We evaluate the degree to which this intention was achieved by using statistical techniques of spatial point pattern analysis to compare crazy quilts with regular quilts from the same region and era and to evaluate the fit of various random distributions to these two quilt classes. We found that the two quilt categories exhibit fundamentally different spatial characteristics: The patch areas of crazy quilts derive from a continuous random distribution, while area distributions of regular quilts consist of Gaussian mixtures. These Gaussian mixtures derive from regular pattern motifs that are repeated and we suggest that such a mixture is a distinctive signature of human-made visual patterns. In contrast, the distribution found in crazy quilts is shared with many other naturally occurring spatial patterns. Centroids of patches in the two quilt classes are spaced differently and in general, crazy quilts but not regular quilts are well-fitted by a random Strauss process. These results indicate that, within the constraints of the quilt format, Victorian quilters indeed achieved their goal of generating random structures.

Mixtures of amino-acid based ionic liquids and water.

PubMed

Chaban, Vitaly V; Fileti, Eudes Eterno

2015-09-01

New ionic liquids (ILs) involving increasing numbers of organic and inorganic ions are continuously being reported. We recently developed a new force field; in the present work, we applied that force field to investigate the structural properties of a few novel imidazolium-based ILs in aqueous mixtures via molecular dynamics (MD) simulations. Using cluster analysis, radial distribution functions, and spatial distribution functions, we argue that organic ions (imidazolium, deprotonated alanine, deprotonated methionine, deprotonated tryptophan) are well dispersed in aqueous media, irrespective of the IL content. Aqueous dispersions exhibit desirable properties for chemical engineering. The ILs exist as ion pairs in relatively dilute aqueous mixtures (10 mol%), while more concentrated mixtures feature a certain amount of larger ionic aggregates.

Laboratory evaluation techniques to investigate the spatial potential of repellents for push & pull mosquito control systems

USDA-ARS?s Scientific Manuscript database

A protocol has been developed for the indoor evaluation of candidate spatial repellents intended for use in push and pull systems. Single treatments (catnip oil, 1-methylpiperazine and homopiperazine) and a mixture of catnip oil and homopiperazine were tested with yellow-fever mosquitoes (Aedes aegy...

Spatial and temporal variation in de facto wastewater reuse in drinking water systems across the U.S.A.

PubMed

Rice, Jacelyn; Westerhoff, Paul

2015-01-20

De facto potable reuse occurs when treated wastewater is discharged into surface waters upstream of potable drinking water treatment plant (DWTP) intakes. Wastewater treatment plant (WWTP) discharges may pose water quality risks at the downstream DWTP, but additional flow aids in providing a reliable water supply source. In this work de facto reuse is analyzed for 2056 surface water intakes serving 1210 DWTPs across the U.S.A. that serve greater than 10,000 people, covering approximately 82% of the nation’s population. An ArcGIS model is developed to assess spatial relationships between DWTPs and WWTPs, with a python script designed to perform a network analysis by hydrologic region. A high frequency of de facto reuse occurrence was observed; 50% of the DWTP intakes are potentially impacted by upstream WWTP discharges. However, the magnitude of de facto reuse was seen to be relatively low, where 50% of the impacted intakes contained less than 1% treated municipal wastewater under average streamflow conditions. De facto reuse increased greatly under low streamflow conditions (modeled by Q95), with 32 of the 80 sites yielding at least 50% treated wastewater, this portion of the analysis is limited to sites where stream gauge data was readily available.

Understanding dynamic pattern and process across spatial scales in river systems using simultaneous deployments of in situ sensors

NASA Astrophysics Data System (ADS)

Wollheim, W. M.; Mulukutla, G.; Cook, C.; Carey, R. O.

2014-12-01

Biogeochemical conditions throughout aquatic landscapes are spatially varied and temporally dynamic due to interactions of upstream land use, climate, hydrologic responses, and internal aquatic processes. One of the key goals in aquatic ecosystem ecology is to parse the upstream influences of terrestrial and aquatic processes on local conditions, which becomes progressively more difficult as watershed size increases and as processes are altered by diverse human activities. Simultaneous deployments of high frequency, in situ aquatic sensors for multiple constituents (e.g. NO3-N, CDOM, turbidity, conductivity, D.O., water temperature, along with flow) offer a new approach for understanding patterns along the aquatic continuum. For this talk, we explore strategies for deployments within single watersheds to improve understanding of terrestrial and aquatic processes. We address applications regarding mobilization of non-point nutrient sources across temporal scales, interactions with land use and watershed size, and the importance of aquatic processes. We also explore ways in which simultaneous sensor deployments can be designed to improve parameterization and testing of river network biogeochemical models. We will provide several specific examples using conductivity, nitrate and carbon from ongoing sensor deployments in New England, USA. We expect that improved deployments of sensors and sensor networks will benefit the management of critical freshwater resources.

Comparison of spatio-temporal resolution of different flow measurement techniques for marine renewable energy applications

NASA Astrophysics Data System (ADS)

Lyon, Vincent; Wosnik, Martin

2013-11-01

Marine hydrokinetic (MHK) energy conversion devices are subject to a wide range of turbulent scales, either due to upstream bathymetry, obstacles and waves, or from wakes of upstream devices in array configurations. The commonly used, robust Acoustic Doppler Current Profilers (ADCP) are well suited for long term flow measurements in the marine environment, but are limited to low sampling rates due to their operational principle. The resulting temporal and spatial resolution is insufficient to measure all turbulence scales of interest to the device, e.g., ``blade-scale turbulence.'' The present study systematically characterizes the spatial and temporal resolution of ADCP, Acoustic Doppler Velocimetry (ADV), and Particle Image Velocimetry (PIV). Measurements were conducted in a large cross section tow tank (3.7m × 2.4m) for several benchmark cases, including low and high turbulence intensity uniform flow as well as in the wake of a cylinder, to quantitatively investigate the flow scales which each of the instruments can resolve. The purpose of the study is to supply data for mathematical modeling to improve predictions from ADCP measurements, which can help lead to higher-fidelity energy resource assessment and more accurate device evaluation, including wake measurements. Supported by NSF-CBET grant 1150797.

Raman-spectroscopy-based chemical contaminant detection in milk powder

NASA Astrophysics Data System (ADS)

Dhakal, Sagar; Chao, Kuanglin; Qin, Jianwei; Kim, Moon S.

2015-05-01

Addition of edible and inedible chemical contaminants in food powders for purposes of economic benefit has become a recurring trend. In recent years, severe health issues have been reported due to consumption of food powders contaminated with chemical substances. This study examines the effect of spatial resolution used during spectral collection to select the optimal spatial resolution for detecting melamine in milk powder. Sample depth of 2mm, laser intensity of 200mw, and exposure time of 0.1s were previously determined as optimal experimental parameters for Raman imaging. Spatial resolution of 0.25mm was determined as the optimal resolution for acquiring spectral signal of melamine particles from a milk-melamine mixture sample. Using the optimal resolution of 0.25mm, sample depth of 2mm and laser intensity of 200mw obtained from previous study, spectral signal from 5 different concentration of milk-melamine mixture (1%, 0.5%, 0.1%, 0.05%, and 0.025%) were acquired to study the relationship between number of detected melamine pixels and corresponding sample concentration. The result shows that melamine concentration has a linear relation with detected number of melamine pixels with correlation coefficient of 0.99. It can be concluded that the quantitative analysis of powder mixture is dependent on many factors including physical characteristics of mixture, experimental parameters, and sample depth. The results obtained in this study are promising. We plan to apply the result obtained from this study to develop quantitative detection model for rapid screening of melamine in milk powder. This methodology can also be used for detection of other chemical contaminants in milk powders.

Modeling abundance using multinomial N-mixture models

USGS Publications Warehouse

Royle, Andy

2016-01-01

Multinomial N-mixture models are a generalization of the binomial N-mixture models described in Chapter 6 to allow for more complex and informative sampling protocols beyond simple counts. Many commonly used protocols such as multiple observer sampling, removal sampling, and capture-recapture produce a multivariate count frequency that has a multinomial distribution and for which multinomial N-mixture models can be developed. Such protocols typically result in more precise estimates than binomial mixture models because they provide direct information about parameters of the observation process. We demonstrate the analysis of these models in BUGS using several distinct formulations that afford great flexibility in the types of models that can be developed, and we demonstrate likelihood analysis using the unmarked package. Spatially stratified capture-recapture models are one class of models that fall into the multinomial N-mixture framework, and we discuss analysis of stratified versions of classical models such as model Mb, Mh and other classes of models that are only possible to describe within the multinomial N-mixture framework.

Reduction of greenhouse gas emissions from feed supply chains by utilizing regionally produced protein sources: the case of Austrian dairy production.

PubMed

Hörtenhuber, Stefan Josef; Lindenthal, Thomas; Zollitsch, Werner

2011-04-01

The aim of this study was to analyse the potential greenhouse gas emissions (GHGE) for regionally alternative produced protein-rich feedstuffs (APRFs) which are utilized for dairy cattle in Austria in comparison to solvent-extracted soybean meal (SBME). In addition to GHGE from agriculture and related upstream supply chains, the effects of land use change were calculated and were included in the results for GHGE. Furthermore, mixtures of APRFs were evaluated which provided energy and utilizable protein equivalent to SBME. Highest GHGE were estimated for SBME, mainly due to land use change-related emissions. Medium GHGE were found for distillers' dried grains with solubles, for seed cake and solvent-extracted meal from rapeseed and for lucerne cobs. Cake and solvent-extracted meal from sunflower seed as well as faba beans were loaded with lowest GHGE. Substituting SBME by nutritionally equivalent mixtures of APRFs, on average, resulted in a reduction of GHGE of 42% (22-62%). Utilization of locally produced APRFs shows clear advantages in terms of GHGE. Balanced mixtures of APRFs may offer specific benefits, as they allow for a combination of desirable nutritional value and reduced GHGE. Copyright © 2011 Society of Chemical Industry.

[An effective method for improving the imaging spatial resolution of terahertz time domain spectroscopy system].

PubMed

Zhang, Zeng-yan; Ji, Te; Zhu, Zhi-yong; Zhao, Hong-wei; Chen, Min; Xiao, Ti-qiao; Guo, Zhi

2015-01-01

Terahertz radiation is an electromagnetic radiation in the range between millimeter waves and far infrared. Due to its low energy and non-ionizing characters, THz pulse imaging emerges as a novel tool in many fields, such as material, chemical, biological medicine, and food safety. Limited spatial resolution is a significant restricting factor of terahertz imaging technology. Near field imaging method was proposed to improve the spatial resolution of terahertz system. Submillimeter scale's spauial resolution can be achieved if the income source size is smaller than the wawelength of the incoming source and the source is very close to the sample. But many changes were needed to the traditional terahertz time domain spectroscopy system, and it's very complex to analyze sample's physical parameters through the terahertz signal. A method of inserting a pinhole upstream to the sample was first proposed in this article to improve the spatial resolution of traditional terahertz time domain spectroscopy system. The measured spatial resolution of terahertz time domain spectroscopy system by knife edge method can achieve spatial resolution curves. The moving stage distance between 10 % and 90 Yo of the maximum signals respectively was defined as the, spatial resolution of the system. Imaging spatial resolution of traditional terahertz time domain spectroscopy system was improved dramatically after inserted a pinhole with diameter 0. 5 mm, 2 mm upstream to the sample. Experimental results show that the spatial resolution has been improved from 1. 276 mm to 0. 774 mm, with the increment about 39 %. Though this simple method, the spatial resolution of traditional terahertz time domain spectroscopy system was increased from millimeter scale to submillimeter scale. A pinhole with diameter 1 mm on a polyethylene plate was taken as sample, to terahertz imaging study. The traditional terahertz time domain spectroscopy system and pinhole inserted terahertz time domain spectroscopy system were applied in the imaging experiment respectively. The relative THz-power loss imaging of samples were use in this article. This method generally delivers the best signal to noise ratio in loss images, dispersion effects are cancelled. Terahertz imaging results show that the sample's boundary was more distinct after inserting the pinhole in front of, sample. The results also conform that inserting pinhole in front of sample can improve the imaging spatial resolution effectively. The theoretical analyses of the method which improve the spatial resolution by inserting a pinhole in front of sample were given in this article. The analyses also indicate that the smaller the pinhole size, the longer spatial coherence length of the system, the better spatial resolution of the system. At the same time the terahertz signal will be reduced accordingly. All the experimental results and theoretical analyses indicate that the method of inserting a pinhole in front of sample can improve the spatial resolution of traditional terahertz time domain spectroscopy system effectively, and it will further expand the application of terahertz imaging technology.

Study of Unsteady, Sphere-Driven, Shock-Induced Combustion for Application to Hypervelocity Airbreathing Propulsion

NASA Technical Reports Server (NTRS)

Axdahl, Erik; Kumar, Ajay; Wilhite, Alan

2011-01-01

A premixed, shock-induced combustion engine has been proposed in the past as a viable option for operating in the Mach 10 to 15 range in a single stage to orbit vehicle. In this approach, a shock is used to initiate combustion in a premixed fuel/air mixture. Apparent advantages over a conventional scramjet engine include a shorter combustor that, in turn, results in reduced weight and heating loads. There are a number of technical challenges that must be understood and resolved for a practical system: premixing of fuel and air upstream of the combustor without premature combustion, understanding and control of instabilities of the shock-induced combustion front, ability to produce sufficient thrust, and the ability to operate over a range of Mach numbers. This study evaluated the stability of the shock-induced combustion front in a model problem of a sphere traveling in a fuel/air mixture at high Mach numbers. A new, rapid analysis method was developed and applied to study such flows. In this method the axisymmetric, body-centric Navier-Stokes equations were expanded about the stagnation streamline of a sphere using the local similarity hypothesis in order to reduce the axisymmetric equations to a quasi-1D set of equations. These reduced sets of equations were solved in the stagnation region for a number of flow conditions in a premixed, hydrogen/air mixture. Predictions from the quasi-1D analysis showed very similar stable or unstable behavior of the shock-induced combustion front as compared to experimental studies and higher-fidelity computational results. This rapid analysis tool could be used in parametric studies to investigate effects of fuel rich/lean mixtures, non-uniformity in mixing, contaminants in the mixture, and different chemistry models.

Computational Modeling of Seismic Wave Propagation Velocity-Saturation Effects in Porous Rocks

NASA Astrophysics Data System (ADS)

Deeks, J.; Lumley, D. E.

2011-12-01

Compressional and shear velocities of seismic waves propagating in porous rocks vary as a function of the fluid mixture and its distribution in pore space. Although it has been possible to place theoretical upper and lower bounds on the velocity variation with fluid saturation, predicting the actual velocity response of a given rock with fluid type and saturation remains an unsolved problem. In particular, we are interested in predicting the velocity-saturation response to various mixtures of fluids with pressure and temperature, as a function of the spatial distribution of the fluid mixture and the seismic wavelength. This effect is often termed "patchy saturation' in the rock physics community. The ability to accurately predict seismic velocities for various fluid mixtures and spatial distributions in the pore space of a rock is useful for fluid detection, hydrocarbon exploration and recovery, CO2 sequestration and monitoring of many subsurface fluid-flow processes. We create digital rock models with various fluid mixtures, saturations and spatial distributions. We use finite difference modeling to propagate elastic waves of varying frequency content through these digital rock and fluid models to simulate a given lab or field experiment. The resulting waveforms can be analyzed to determine seismic traveltimes, velocities, amplitudes, attenuation and other wave phenomena for variable rock models of fluid saturation and spatial fluid distribution, and variable wavefield spectral content. We show that we can reproduce most of the published effects of velocity-saturation variation, including validating the Voigt and Reuss theoretical bounds, as well as the Hill "patchy saturation" curve. We also reproduce what has been previously identified as Biot dispersion, but in fact in our models is often seen to be wave multi-pathing and broadband spectral effects. Furthermore, we find that in addition to the dominant seismic wavelength and average fluid patch size, the smoothness of the fluid patches are a critical factor in determining the velocity-saturation response; this is a result that we have not seen discussed in the literature. Most importantly, we can reproduce all of these effects using full elastic wavefield scattering, without the need to resort to more complicated squirt-flow or poroelastic models. This is important because the physical properties and parameters we need to model full elastic wave scattering, and predict a velocity-saturation curve, are often readily available for projects we undertake; this is not the case for poroelastic or squirt-flow models. We can predict this velocity saturation curve for a specific rock type, fluid mixture distribution and wavefield spectrum.

Predictions of lithium interactions with earth's bow shock in the presence of wave activity

NASA Technical Reports Server (NTRS)

Decker, R. B.; Lui, A. T. Y.; Vlahos, L.

1984-01-01

The results of a test-particle simulation studying the movement of a lithium tracer ion injected upstream of the bow shock are reported. Wave activity consists of parallel and antiparallel propagating Alfven waves characterized by a frequency power spectrum within a frequency or range of amplitudes defined separately in the upstream and downstream regions. The results show that even a moderate level of wave activity can substantially change the results obtained in the absence of waves. Among the effects observed are: (1) increased ion transmission; (2) both the average energy gain and spread about the average are increased for transmitted and reflected particles; (3) the average final pitch angle for transmitted particles tends to 90 deg, and the spread of reflected particles is reduced; and (4) the spatial dispersion of the ions on the bow shock after a single encounter is increased.

A rotating hot-wire technique for spatial sampling of disturbed and manipulated duct flows

NASA Technical Reports Server (NTRS)

Wark, C. E.; Nagib, H. M.; Jennings, M. J.

1990-01-01

A duct flow spatial sampling technique, in which an X-wire probe is rotated about the center of a cylindrical test section at a radius equal to one-half that of the test section in order to furnish nearly instantaneous multipoint measurements of the streamwise and azimuthal components, is presently evaluated in view of the control of flow disturbances downstream of various open inlet contractions. The effectiveness of a particular contraction in controlling ingested flow disturbances was ascertained by artificially introducing disturbances upstream of the contractions; control effectiveness if found to be strongly dependent on inlet contraction, with consequences for the reduction of passing-blade frequency noise during gas turbine engine ground testing.

Self-assembly of Nano-rods in Photosensitive Phase Separation

NASA Astrophysics Data System (ADS)

Liu, Ya; Kuksenok, Olga; Maresov, Egor; Balazs, Anna

2012-02-01

Computer simulations reveal how photo-induced chemical reactions in polymeric mixtures can be exploited to create long-range order in materials whose features range from the sub-micron to the nanoscale. The process is initiated by shining a spatially uniform light on a photosensitive AB binary blend, which thereby undergoes both a reversible chemical reaction and phase separation. When a well-collimated, higher intensity light is rastered over the sample, the system forms defect-free, spatially periodic structures. We now build on this approach by introducing nanorods that have a preferential affinity for one the phases in a binary mixture. By rastering over the sample with the higher intensity light, we can create ordered arrays of rods within periodically ordered materials in essentially one processing step.

Spatial and temporal distribution of metals in suspended particulate matter of the Kali estuary, India

NASA Astrophysics Data System (ADS)

Suja, S.; Kessarkar, Pratima M.; Fernandes, Lina L.; Kurian, Siby; Tomer, Arti

2017-09-01

Major (Al, Fe, Mn, Ti, Mg) and trace (Cu, Zn, Pb, Cr, Ni, Co, Zr, Rb, Sr, Ba, Li, Be, Sc, V, Ga, Nb, Mo, Sn, Sb, Cs, Hf, Ta, Bi, Th, U) elements and particulate organic carbon (POC) concentrations in surface suspended particulate matter (SPM) of the Kali estuary, (central west coast of India) were studied during the pre-monsoon, monsoon and post monsoon seasons to infer estuarine processes, source of SPM and Geoaccumulation Index (Igeo) assigned pollutionIgeo levels. Distribution of SPM indicates the presence of the estuarine turbidity maximum (ETM) during all three seasons near the river mouth and a second ETM during the post monsoon time in the upstream associated with salinities gradient. The SPM during the monsoon is finer grained (avg. 53 μm), characterized by uniformly low normalized elemental concentration, whereas the post and pre monsoon are characterized by high normalized elemental concentration with coarser grain size (avg. 202 μm and 173 μm respectively) with highest ratios in the upstream estuary. The elemental composition and principal component analysis for the upstream estuary SPM support more contribution from the upstream catchment area rocks during the monsoon season; there is additional contribution from the downstream catchment area during the pre and post monsoon period due to the tidal effect. The Kali estuarine SPM has higher Al, Fe, Mn, Ti, Mg, Ni, Co, Ba, Li and V with respect to Average World River SPM (WRSPM). Igeo values for the SPM indicate Kali Estuary to be severely enriched with Mn and moderately enriched with Cu, Zn, Ni, Co, U and Mo in the upstream estuary during pre and post monsoon seasons. Seasonal changes in salinity gradient (reduced freshwater flow due to closing of the dam gates), reduced velocity at meandering region of the estuary and POC of 1.6-2.3% resulted in co-precipitation of trace elements that were further fortified by flocculation and coagulation throughout the water column resulting in metal trapping in the upstream region.

Scaling effect of fraction of vegetation cover retrieved by algorithms based on linear mixture model

NASA Astrophysics Data System (ADS)

Obata, Kenta; Miura, Munenori; Yoshioka, Hiroki

2010-08-01

Differences in spatial resolution among sensors have been a source of error among satellite data products, known as a scaling effect. This study investigates the mechanism of the scaling effect on fraction of vegetation cover retrieved by a linear mixture model which employs NDVI as one of the constraints. The scaling effect is induced by the differences in texture, and the differences between the true endmember spectra and the endmember spectra assumed during retrievals. A mechanism of the scaling effect was analyzed by focusing on the monotonic behavior of spatially averaged FVC as a function of spatial resolution. The number of endmember is limited into two to proceed the investigation analytically. Although the spatially-averaged NDVI varies monotonically along with spatial resolution, the corresponding FVC values does not always vary monotonically. The conditions under which the averaged FVC varies monotonically for a certain sequence of spatial resolutions, were derived analytically. The increasing and decreasing trend of monotonic behavior can be predicted from the true and assumed endmember spectra of vegetation and non-vegetation classes regardless the distributions of the vegetation class within a fixed area. The results imply that the scaling effect on FVC is more complicated than that on NDVI, since, unlike NDVI, FVC becomes non-monotonic under a certain condition determined by the true and assumed endmember spectra.

Inverse analysis and regularisation in conditional source-term estimation modelling

NASA Astrophysics Data System (ADS)

Labahn, Jeffrey W.; Devaud, Cecile B.; Sipkens, Timothy A.; Daun, Kyle J.

2014-05-01

Conditional Source-term Estimation (CSE) obtains the conditional species mass fractions by inverting a Fredholm integral equation of the first kind. In the present work, a Bayesian framework is used to compare two different regularisation methods: zeroth-order temporal Tikhonov regulatisation and first-order spatial Tikhonov regularisation. The objectives of the current study are: (i) to elucidate the ill-posedness of the inverse problem; (ii) to understand the origin of the perturbations in the data and quantify their magnitude; (iii) to quantify the uncertainty in the solution using different priors; and (iv) to determine the regularisation method best suited to this problem. A singular value decomposition shows that the current inverse problem is ill-posed. Perturbations to the data may be caused by the use of a discrete mixture fraction grid for calculating the mixture fraction PDF. The magnitude of the perturbations is estimated using a box filter and the uncertainty in the solution is determined based on the width of the credible intervals. The width of the credible intervals is significantly reduced with the inclusion of a smoothing prior and the recovered solution is in better agreement with the exact solution. The credible intervals for temporal and spatial smoothing are shown to be similar. Credible intervals for temporal smoothing depend on the solution from the previous time step and a smooth solution is not guaranteed. For spatial smoothing, the credible intervals are not dependent upon a previous solution and better predict characteristics for higher mixture fraction values. These characteristics make spatial smoothing a promising alternative method for recovering a solution from the CSE inversion process.

Mathematics of thermal diffusion in an exponential temperature field

NASA Astrophysics Data System (ADS)

Zhang, Yaqi; Bai, Wenyu; Diebold, Gerald J.

2018-04-01

The Ludwig-Soret effect, also known as thermal diffusion, refers to the separation of gas, liquid, or solid mixtures in a temperature gradient. The motion of the components of the mixture is governed by a nonlinear, partial differential equation for the density fractions. Here solutions to the nonlinear differential equation for a binary mixture are discussed for an externally imposed, exponential temperature field. The equation of motion for the separation without the effects of mass diffusion is reduced to a Hamiltonian pair from which spatial distributions of the components of the mixture are found. Analytical calculations with boundary effects included show shock formation. The results of numerical calculations of the equation of motion that include both thermal and mass diffusion are given.

A spatial age-structured model for describing sea lamprey (Petromyzon marinus) population dynamics

USGS Publications Warehouse

Robinson, Jason M.; Wilberg, Michael J.; Adams, Jean V.; Jones, Michael L.

2013-01-01

The control of invasive sea lampreys (Petromyzon marinus) presents large scale management challenges in the Laurentian Great Lakes. No modeling approach has been developed that describes spatial dynamics of lamprey populations. We developed and validated a spatial and age-structured model and applied it to a sea lamprey population in a large river in the Great Lakes basin. We considered 75 discrete spatial areas, included a stock-recruitment function, spatial recruitment patterns, natural mortality, chemical treatment mortality, and larval metamorphosis. Recruitment was variable, and an upstream shift in recruitment location was observed over time. From 1993–2011 recruitment, larval abundance, and the abundance of metamorphosing individuals decreased by 80, 84, and 86%, respectively. The model successfully identified areas of high larval abundance and showed that areas of low larval density contribute significantly to the population. Estimated treatment mortality was less than expected but had a large population-level impact. The results and general approach of this work have applications for sea lamprey control throughout the Great Lakes and for the restoration and conservation of native lamprey species globally.

A mixture neural net for multispectral imaging spectrometer processing

NASA Technical Reports Server (NTRS)

Casasent, David; Slagle, Timothy

1990-01-01

Each spatial region viewed by an imaging spectrometer contains various elements in a mixture. The elements present and the amount of each are to be determined. A neural net solution is considered. Initial optical neural net hardware is described. The first simulations on the component requirements of a neural net are considered. The pseudoinverse solution is shown to not suffice, i.e. a neural net solution is required.

Detection of Spatially Unresolved (Nominally Sub-Pixel) Submerged and Surface Targets Using Hyperspectral Data

DTIC Science & Technology

2012-09-01

Feasibility (MT Modeling ) a. Continuum of mixture distributions interpolated b. Mixture infeasibilities calculated for each pixel c. Valid detections...Visible/Infrared Imaging Spectrometer BRDF Bidirectional Reflectance Distribution Function CASI Compact Airborne Spectrographic Imager CCD...filtering (MTMF), and was designed by Healey and Slater (1999) to use “a physical model to generate the set of sensor spectra for a target that will be

OH radical production in an atmospheric pressure surface micro-discharge array

NASA Astrophysics Data System (ADS)

Li, D.; Nikiforov, A.; Britun, N.; Snyders, R.; Kong, M. G.; Leys, C.

2016-11-01

The generation of OH radicals from an array of surface micro-discharges working in atmospheric pressure He/Ar/H2O mixtures is investigated. The absolute OH density and its temporal-and-spatial dynamics are detected by UV broadband absorption spectroscopy (UV-BAS) and laser-induced fluorescence (LIF) spectroscopy. The measured absolute density of OH(X) state is about 1021 m-3 in Ar/H2O mixture reaching a peak at 0.05% of H2O. In the case of He/H2O mixtures however, the peaking at ~1019 m-3 is approximately two orders of magnitude lower and decreases monotonously with increasing H2O content. From a control standpoint, the ratio of the Ar/He mixture may be adjusted to tune the OH density over two orders of magnitude and to modulate the H2O content dependence of the OH density. The capability of modulating the OH radical production over a large density range is of practical interest for many applications such as atmospheric chemistry and biochemistry. With the array of atmospheric micro-discharges sustained over a large electrode area, a uniform distribution of its OH density can be achieved in a plane parallel to the electrodes thus enabling spatially controlled surface treatment of large samples.

Effect of Aluminium Confinement on ANFO Detonation

NASA Astrophysics Data System (ADS)

Short, Mark; Jackson, Scott; Kiyanda, Charles; Shinas, Mike; Hare, Steve; Briggs, Matt

2013-06-01

Detonations in confined non-ideal high explosives often have velocities below the confiner sound speed. The effect on detonation propagation of the resulting subsonic flow in the confiner (such as confiner stress waves traveling ahead of the main detonation front or upstream wall deflection into the HE) has yet to be fully understood. Previous work by Sharpe and Bdzil (J. Eng. Math, 2006) has shown that for subsonic confiner flow, there is no limiting thickness for which the detonation dynamics are uninfluenced by further increases in wall thickness. The critical parameters influencing detonation behavior are the wall thickness relative to the HE reaction zone size, and the difference in the detonation velocity and confiner sound speed. Additional possible outcomes of subsonic flow are that for increasing thickness, the confiner is increasingly deflected into the HE upstream of the detonation, and that for sufficiently thick confiners, the detonation speed could be driven up to the sound speed in the confiner. We report here on a further series of experiments in which a mixture of ammonium nitrate and fuel oil (ANFO) is detonated in aluminum confiners with varying HE charge diameter and confiner thickness, and compare the results with the outcomes suggested by Sharpe and Bdzil.

pH-Modulated Watson-Crick duplex-quadruplex equilibria of guanine-rich and cytosine-rich DNA sequences 140 base pairs upstream of the c-kit transcription initiation site.

PubMed

Bucek, Pavel; Jaumot, Joaquim; Aviñó, Anna; Eritja, Ramon; Gargallo, Raimundo

2009-11-23

Guanine-rich regions of DNA are sequences capable of forming G-quadruplex structures. The formation of a G-quadruplex structure in a region 140 base pairs (bp) upstream of the c-kit transcription initiation site was recently proposed (Fernando et al., Biochemistry, 2006, 45, 7854). In the present study, the acid-base equilibria and the thermally induced unfolding of the structures formed by a guanine-rich region and by its complementary cytosine-rich strand in c-kit were studied by means of circular dichroism and molecular absorption spectroscopies. In addition, competition between the Watson-Crick duplex and the isolated structures was studied as a function of pH value and temperature. Multivariate data analysis methods based on both hard and soft modeling were used to allow accurate quantification of the various acid-base species present in the mixtures. Results showed that the G-quadruplex and i-motif coexist with the Watson-Crick duplex over the pH range from 3.0 to 6.5, approximately, under the experimental conditions tested in this study. At pH 7.0, the duplex is practically the only species present.

Effects of Buoyancy on the Flowfields of Lean Premixed Turbulent V-Flames

NASA Technical Reports Server (NTRS)

Cheng, R. K.; Greenberg, P.; Bedat, B.; Yegian, D. T.

1999-01-01

Open laboratory turbulent flames used for investigating fundament flame turbulence interactions are greatly affected by buoyancy. Though much of our current knowledge is based on observations made in these open flames, the effects of buoyancy are usually not included in data interpretation, numerical analysis or theories. This inconsistency remains an obstacle to merging experimental observations and theoretical predictions. To better understanding the effects of buoyancy, our research focuses on steady lean premixed flames propagating in fully developed turbulence. We hypothesize that the most significant role of buoyancy forces on these flames is to influence their flowfields through a coupling with mean and fluctuating pressure fields. Changes in flow pattern alter the mean aerodynamic stretch and in turn affect turbulence fluctuation intensities both upstream and downstream of the flame zone. Consequently, flame stabilization, reaction rates, and turbulent flame processes are all affected. This coupling relates to the elliptical problem that emphasizes the importance of the upstream, wall and downstream boundary conditions in determining all aspects of flame propagation. Therefore, buoyancy has the same significance as other parameters such as flow configuration, flame geometry, means of flame stabilization, flame shape, enclosure size, mixture conditions, and flow conditions.

Effects of free-stream turbulence intensity on transition in a laminar separation bubble formed over an airfoil

NASA Astrophysics Data System (ADS)

Istvan, Mark S.; Yarusevych, Serhiy

2018-03-01

The laminar-to-turbulent transition process in a laminar separation bubble formed over a NACA 0018 airfoil is investigated experimentally. All experiments are performed for an angle of attack of 4°, chord Reynolds numbers of 80,000 and 125,000, and free-stream turbulence intensities between 0.06 and 1.99%. The results show that increasing the level of free-stream turbulence intensity leads to a decrease in separation bubble length, attributed to a downstream shift in mean separation and an upstream shift in mean reattachment, the later ascribed to an upstream shift in mean transition. Maximum spatial amplification rates of disturbances in the separated shear layer decrease with increasing free-stream turbulence intensity, implying that the larger initial amplitudes of disturbances are solely responsible for the upstream shift in mean transition and as a result mean reattachment. At the baseline level of turbulence intensity, coherent structures forming in the aft portion of the bubble are characterized by strong spanwise coherence at formation, and undergo spanwise deformations leading to localized breakup in the vicinity of mean reattachment. As the level of free-stream turbulence intensity is increased, the spanwise coherence of the shear layer rollers is reduced, and spanwise undulations in the vortex filaments start to take place at the mean location of roll-up. At the highest level of turbulence intensity investigated, streamwise streaks originating in the boundary layer upstream of the separation bubble are observed within the bubble. These streaks signify an onset of bypass transition upstream of the separation bubble, which gives rise to a highly three-dimensional shear layer roll-up. A quantitative analysis of the associated changes in salient characteristics of the coherent structures is presented, connecting the effect of elevated free-stream turbulence intensity on the time-averaged and dynamic characteristics of the separation bubble.

Quantitative simulation tools to analyze up- and downstream interactions of soil and water conservation measures: supporting policy making in the Green Water Credits program of Kenya.

PubMed

Hunink, J E; Droogers, P; Kauffman, S; Mwaniki, B M; Bouma, J

2012-11-30

Upstream soil and water conservation measures in catchments can have positive impact both upstream in terms of less erosion and higher crop yields, but also downstream by less sediment flow into reservoirs and increased groundwater recharge. Green Water Credits (GWC) schemes are being developed to encourage upstream farmers to invest in soil and water conservation practices which will positively effect upstream and downstream water availability. Quantitative information on water and sediment fluxes is crucial as a basis for such financial schemes. A pilot design project in the large and strategically important Upper-Tana Basin in Kenya has the objective to develop a methodological framework for this purpose. The essence of the methodology is the integration and use of a collection of public domain tools and datasets: the so-called Green water and Blue water Assessment Toolkit (GBAT). This toolkit was applied in order to study different options to implement GWC in agricultural rainfed land for the pilot study. Impact of vegetative contour strips, mulching, and tied ridges were determined for: (i) three upstream key indicators: soil loss, crop transpiration and soil evaporation, and (ii) two downstream indicators: sediment inflow in reservoirs and groundwater recharge. All effects were compared with a baseline scenario of average conditions. Thus, not only actual land management was considered but also potential benefits of changed land use practices. Results of the simulations indicate that especially applying contour strips or tied ridges significantly reduces soil losses and increases groundwater recharge in the catchment. The model was used to build spatial expressions of the proposed management practices in order to assess their effectiveness. The developed procedure allows exploring the effects of soil conservation measures in a catchment to support the implementation of GWC. Copyright © 2012 Elsevier Ltd. All rights reserved.

Particulate Organic Matter Distribution along the Lower Amazon River: Addressing Aquatic Ecology Concepts Using Fatty Acids

PubMed Central

Mortillaro, Jean-Michel; Rigal, François; Rybarczyk, Hervé; Bernardes, Marcelo; Abril, Gwenaël; Meziane, Tarik

2012-01-01

One of the greatest challenges in understanding the Amazon basin functioning is to ascertain the role played by floodplains in the organic matter (OM) cycle, crucial for a large spectrum of ecological mechanisms. Fatty acids (FAs) were combined with environmental descriptors and analyzed through multivariate and spatial tools (asymmetric eigenvector maps, AEM and principal coordinates of neighbor matrices, PCNM). This challenge allowed investigating the distribution of suspended particulate organic matter (SPOM), in order to trace its seasonal origin and quality, along a 800 km section of the Amazon river-floodplain system. Statistical analysis confirmed that large amounts of saturated FAs (15:0, 18:0, 24:0, 25:0 and 26:0), an indication of refractory OM, were concomitantly recorded with high pCO2 in rivers, during the high water season (HW). Contrastingly, FAs marker which may be attributed in this ecosystem to aquatic plants (18:2ω6 and 18:3ω3) and cyanobacteria (16:1ω7), were correlated with higher O2, chlorophyll a and pheopigments in floodplains, due to a high primary production during low waters (LW). Decreasing concentrations of unsaturated FAs, that characterize labile OM, were recorded during HW, from upstream to downstream. Furthermore, using PCNM and AEM spatial methods, FAs compositions of SPOM displayed an upstream-downstream gradient during HW, which was attributed to OM retention and the extent of flooded forest in floodplains. Discrimination of OM quality between the Amazon River and floodplains corroborate higher autotrophic production in the latter and transfer of OM to rivers at LW season. Together, these gradients demonstrate the validity of FAs as predictors of spatial and temporal changes in OM quality. These spatial and temporal trends are explained by 1) downstream change in landscape morphology as predicted by the River Continuum Concept; 2) enhanced primary production during LW when the water level decreased and its residence time increased as predicted by the Flood Pulse Concept. PMID:23029412

Effect of upstream ULF waves on the energetic ion diffusion at the earth's foreshock: Theory, Simulation, and Observations

NASA Astrophysics Data System (ADS)

Otsuka, F.; Matsukiyo, S.; Kis, A.; Hada, T.

2017-12-01

Spatial diffusion of energetic particles is an important problem not only from a fundamental physics point of view but also for its application to particle acceleration processes at astrophysical shocks. Quasi-linear theory can provide the spatial diffusion coefficient as a function of the wave turbulence spectrum. By assuming a simple power-law spectrum for the turbulence, the theory has been successfully applied to diffusion and acceleration of cosmic rays in the interplanetary and interstellar medium. Near the earth's foreshock, however, the wave spectrum often has an intense peak, presumably corresponding to the upstream ULF waves generated by the field-aligned beam (FAB). In this presentation, we numerically and theoretically discuss how the intense ULF peak in the wave spectrum modifies the spatial parallel diffusion of energetic ions. The turbulence is given as a superposition of non-propagating transverse MHD waves in the solar wind rest frame, and its spectrum is composed of a piecewise power-law spectrum with different power-law indices. The diffusion coefficients are then estimated by using the quasi-linear theory and test particle simulations. We find that the presence of the ULF peak produces a concave shape of the diffusion coefficient when it is plotted versus the ion energy. The results above are used to discuss the Cluster observations of the diffuse ions at the Earth's foreshock. Using the density gradients of the energetic ions detected by the Cluster spacecraft, we determine the e-folding distances, equivalently, the spatial diffusion coefficients, of ions with their energies from 10 to 32 keV. The observed e-folding distances are significantly smaller than those estimated in the past statistical studies. This suggests that the particle acceleration at the foreshock can be more efficient than considered before. Our test particle simulation explains well the small estimate of the e-folding distances, by using the observed wave turbulence spectrum near the shock.

A Climatology of Global Aerosol Mixtures to Support Sentinel-5P and Earthcare Mission Applications

NASA Astrophysics Data System (ADS)

Taylor, M.; Kazadzis, S.; Amaridis, V.; Kahn, R. A.

2015-11-01

Since constraining aerosol type with satellite remote sensing continues to be a challenge, we present a newly derived global climatology of aerosol mixtures to support atmospheric composition studies that are planned for Sentinel-5P and EarthCARE.The global climatology is obtained via application of iterative cluster analysis to gridded global decadal and seasonal mean values of the aerosol optical depth (AOD) of sulfate, biomass burning, mineral dust and marine aerosol as a proportion of the total AOD at 500nm output from the Goddard Chemistry Aerosol Radiation and Transport (GOCART). For both the decadal and seasonal means, the number of aerosol mixtures (clusters) identified is ≈10. Analysis of the percentage contribution of the component aerosol types to each mixture allowed development of a straightforward naming convention and taxonomy, and assignment of primary colours for the generation of true colour-mixing and easy-to-interpret maps of the spatial distribution of clusters across the global grid. To further help characterize the mixtures, aerosol robotic network (AERONET) Level 2.0 Version 2 inversion products were extracted from each cluster‟s spatial domain and used to estimate climatological values of key optical and microphysical parameters.The aerosol type climatology represents current knowledge that would be enhanced, possibly corrected, and refined by high temporal and spectral resolution, cloud-free observations produced by Sentinel-5P and EarthCARE instruments. The global decadal mean and seasonal gridded partitions comprise a preliminary reference framework and global climatology that can help inform the choice of components and mixtures in aerosol retrieval algorithms used by instruments such as TROPOMI and ATLID, and to test retrieval results.

An evaluation of the Bayesian approach to fitting the N-mixture model for use with pseudo-replicated count data

USGS Publications Warehouse

Toribo, S.G.; Gray, B.R.; Liang, S.

2011-01-01

The N-mixture model proposed by Royle in 2004 may be used to approximate the abundance and detection probability of animal species in a given region. In 2006, Royle and Dorazio discussed the advantages of using a Bayesian approach in modelling animal abundance and occurrence using a hierarchical N-mixture model. N-mixture models assume replication on sampling sites, an assumption that may be violated when the site is not closed to changes in abundance during the survey period or when nominal replicates are defined spatially. In this paper, we studied the robustness of a Bayesian approach to fitting the N-mixture model for pseudo-replicated count data. Our simulation results showed that the Bayesian estimates for abundance and detection probability are slightly biased when the actual detection probability is small and are sensitive to the presence of extra variability within local sites.

Proceedings of the Third Annual Symposium on Mathematical Pattern Recognition and Image Analysis

NASA Technical Reports Server (NTRS)

Guseman, L. F., Jr.

1985-01-01

Topics addressed include: multivariate spline method; normal mixture analysis applied to remote sensing; image data analysis; classifications in spatially correlated environments; probability density functions; graphical nonparametric methods; subpixel registration analysis; hypothesis integration in image understanding systems; rectification of satellite scanner imagery; spatial variation in remotely sensed images; smooth multidimensional interpolation; and optimal frequency domain textural edge detection filters.

Reaction pathways in remote plasma nitridation of ultrathin SiO2 films

NASA Astrophysics Data System (ADS)

Niimi, Hiro; Khandelwal, Amit; Lamb, H. Henry; Lucovsky, Gerald

2002-01-01

Low-temperature nitridation of 3 nm SiO2 films using He/N2 and N2 remote radio frequency (rf) plasmas was investigated. On-line Auger electron spectroscopy and angle-resolved x-ray photoelectron spectroscopy (ARXPS) were employed to determine the concentration, spatial distribution, and local chemical bonding of nitrogen in the resultant films. Experiments were performed using a substrate temperature of 300 °C and 30 W rf power. Nitridation using an upstream He/N2 remote plasma at 0.1 Torr incorporates nitrogen at the top surface of the SiO2 film. In contrast, a lower concentration of nitrogen distributed throughout the film is obtained when the process pressure is increased to 0.3 Torr. ARXPS indicates a N-Si3 local bonding configuration, irrespective of the spatial distribution of N atoms. Slightly more nitrogen is incorporated using a downstream He/N2 plasma at each process pressure. By comparison, nitridation of SiO2 films using a N2 remote plasma at 0.1 Torr is very slow. Optical emission spectroscopy indicates that He dilution enhances the generation of N2+(B 2Σu+) species by altering the plasma electron energy distribution and by providing an additional kinetic pathway (Penning ionization). Changing the He/N2 remote plasma configuration from upstream to downstream (at 0.1 and 0.3 Torr) also enhances N2+(B 2Σu+) generation. For upstream He/N2 remote plasmas, the intensity of N2 first positive emission from N2(B 3Πg) states increases with pressure, whereas the N2+ first negative emission from N2+(B 2Σu+) states decreases. We infer from these observations that N2+ species are primarily responsible for top surface nitridation at 0.1 Torr, and that neutral species [N2(A 3Σu+) metastables and N atoms] are associated with sub-surface nitrogen incorporation.

Analyzing the Impacts of Dams on Riparian Ecosystems: A Review of Research Strategies and Their Relevance to the Snake River Through Hells Canyon

PubMed Central

Braatne, Jeffrey H.; Goater, Lori A.; Blair, Charles L.

2007-01-01

River damming provides a dominant human impact on river environments worldwide, and while local impacts of reservoir flooding are immediate, subsequent ecological impacts downstream can be extensive. In this article, we assess seven research strategies for analyzing the impacts of dams and river flow regulation on riparian ecosystems. These include spatial comparisons of (1) upstream versus downstream reaches, (2) progressive downstream patterns, or (3) the dammed river versus an adjacent free-flowing or differently regulated river(s). Temporal comparisons consider (4) pre- versus post-dam, or (5) sequential post-dam conditions. However, spatial comparisons are complicated by the fact that dams are not randomly located, and temporal comparisons are commonly limited by sparse historic information. As a result, comparative approaches are often correlative and vulnerable to confounding factors. To complement these analyses, (6) flow or sediment modifications can be implemented to test causal associations. Finally, (7) process-based modeling represents a predictive approach incorporating hydrogeomorphic processes and their biological consequences. In a case study of Hells Canyon, the upstream versus downstream comparison is confounded by a dramatic geomorphic transition. Comparison of the multiple reaches below the dams should be useful, and the comparison of Snake River with the adjacent free-flowing Salmon River may provide the strongest spatial comparison. A pre- versus post-dam comparison would provide the most direct study approach, but pre-dam information is limited to historic reports and archival photographs. We conclude that multiple study approaches are essential to provide confident interpretations of ecological impacts downstream from dams, and propose a comprehensive study for Hells Canyon that integrates multiple research strategies. PMID:18043964

Determinants of fish assemblage structure in Northwestern Great Plains streams

USGS Publications Warehouse

Mullen, J.A.; Bramblett, R.G.; Guy, C.S.; Zale, A.V.; Roberts, D.W.

2011-01-01

Prairie streams are known for their harsh and stochastic physical conditions, and the fish assemblages therein have been shown to be temporally variable. We assessed the spatial and temporal variation in fish assemblage structure in five intermittent, adventitious northwestern Great Plains streams representing a gradient of watershed areas. Fish assemblages and abiotic conditions varied more spatially than temporally. The most important variables explaining fish assemblage structure were longitudinal position and the proportion of fine substrates. The proportion of fine substrates increased proceeding upstream, approaching 100% in all five streams, and species richness declined upstream with increasing fine substrates. High levels of fine substrate in the upper reaches appeared to limit the distribution of obligate lithophilic fish species to reaches further downstream. Species richness and substrates were similar among all five streams at the lowermost and uppermost sites. However, in the middle reaches, species richness increased, the amount of fine substrate decreased, and connectivity increased as watershed area increased. Season and some dimensions of habitat (including thalweg depth, absolute distance to the main-stem river, and watershed size) were not essential in explaining the variation in fish assemblages. Fish species richness varied more temporally than overall fish assemblage structure did because common species were consistently abundant across seasons, whereas rare species were sometimes absent or perhaps not detected by sampling. The similarity in our results among five streams varying in watershed size and those from other studies supports the generalization that spatial variation exceeds temporal variation in the fish assemblages of prairie and warmwater streams. Furthermore, given longitudinal position, substrate, and stream size, general predictions regarding fish assemblage structure and function in prairie streams are possible. ?? American Fisheries Society 2011.

Patterning ecological risk of pesticide contamination at the river basin scale.

PubMed

Faggiano, Leslie; de Zwart, Dick; García-Berthou, Emili; Lek, Sovan; Gevrey, Muriel

2010-05-01

Ecological risk assessment was conducted to determine the risk posed by pesticide mixtures to the Adour-Garonne river basin (south-western France). The objectives of this study were to assess the general state of this basin with regard to pesticide contamination using a risk assessment procedure and to detect patterns in toxic mixture assemblages through a self-organizing map (SOM) methodology in order to identify the locations at risk. Exposure assessment, risk assessment with species sensitivity distribution, and mixture toxicity rules were used to compute six relative risk predictors for different toxic modes of action: the multi-substance potentially affected fraction of species depending on the toxic mode of action of compounds found in the mixture (msPAF CA(TMoA) values). Those predictors computed for the 131 sampling sites assessed in this study were then patterned through the SOM learning process. Four clusters of sampling sites exhibiting similar toxic assemblages were identified. In the first cluster, which comprised 83% of the sampling sites, the risk caused by pesticide mixture toward aquatic species was weak (mean msPAF value for those sites<0.0036%), while in another cluster the risk was significant (mean msPAF<1.09%). GIS mapping allowed an interesting spatial pattern of the distribution of sampling sites for each cluster to be highlighted with a significant and highly localized risk in the French department called "Lot et Garonne". The combined use of the SOM methodology, mixture toxicity modelling and a clear geo-referenced representation of results not only revealed the general state of the Adour-Garonne basin with regard to contamination by pesticides but also enabled to analyze the spatial pattern of toxic mixture assemblage in order to prioritize the locations at risk and to detect the group of compounds causing the greatest risk at the basin scale. Copyright 2010 Elsevier B.V. All rights reserved.

Absolute and Convective Instability of a Liquid Jet in Microgravity

NASA Technical Reports Server (NTRS)

Lin, Sung P.; Vihinen, I.; Honohan, A.; Hudman, Michael D.

1996-01-01

The transition from convective to absolute instability is observed in the 2.2 second drop tower of the NASA Lewis Research Center. In convective instability the disturbance grows spatially as it is convected downstream. In absolute instability the disturbance propagates both downstream and upstream, and manifests itself as an expanding sphere. The transition Reynolds numbers are determined for two different Weber numbers by use of Glycerin and a Silicone oil. Preliminary comparisons with theory are made.

Modulation of a methane Bunsen flame by upstream perturbations

NASA Astrophysics Data System (ADS)

de Souza, T. Cardoso; Bastiaans, R. J. M.; De Goey, L. P. H.; Geurts, B. J.

2017-04-01

In this paper the effects of an upstream spatially periodic modulation acting on a turbulent Bunsen flame are investigated using direct numerical simulations of the Navier-Stokes equations coupled with the flamelet generated manifold (FGM) method to parameterise the chemistry. The premixed Bunsen flame is spatially agitated with a set of coherent large-scale structures of specific wave-number, K. The response of the premixed flame to the external modulation is characterised in terms of time-averaged properties, e.g. the average flame height ⟨H⟩ and the flame surface wrinkling ⟨W⟩. Results show that the flame response is notably selective to the size of the length scales used for agitation. For example, both flame quantities ⟨H⟩ and ⟨W⟩ present an optimal response, in comparison with an unmodulated flame, when the modulation scale is set to relatively low wave-numbers, 4π/L ≲ K ≲ 6π/L, where L is a characteristic scale. At the agitation scales where the optimal response is observed, the average flame height, ⟨H⟩, takes a clearly defined minimal value while the surface wrinkling, ⟨W⟩, presents an increase by more than a factor of 2 in comparison with the unmodulated reference case. Combined, these two response quantities indicate that there is an optimal scale for flame agitation and intensification of combustion rates in turbulent Bunsen flames.

Temporal trends and transport of perfluoroalkyl substances (PFASs) in a subtropical estuary: Jiulong River Estuary, Fujian, China.

PubMed

Cai, Yizhi; Wang, Xinhong; Wu, Yuling; Zhao, Songhe; Li, Yongyu; Ma, Liya; Chen, Can; Huang, Jun; Yu, Gang

2018-05-19

The seasonal variations and spatial distributions of fifteen perfluoroalkyl substances (PFASs) were investigated in the water of the subtropical Jiulong River Estuary (JRE) in Fujian, China. The concentrations and composition profiles of PFASs showed significant seasonal variations. ∑PFASs concentrations ranged from 4.8 to 37.6 ng L -1 , 12.2 to 110 ng L -1 and 3.3 to 43.0 ng L -1 in the dry, medium and wet seasons, respectively. Perfluorooctane sulfonate (PFOS) was found to be the most abundant PFAS in the dry season, with a composition of 33% ± 5%, Perfluorohexanoic acid PFHxA (47% ± 13%) and perfluoropentanoic acid (PFPeA) (52% ± 15%) were the dominant compounds in the medium and wet seasons, respectively. Seasonal and spatial distributions of ∑PFASs were different in the upstream and downstream sections. High concentration of PFHxA occurred in the medium season, and showed a linear decreasing trend from upstream to downstream. The majority of other PFASs did not show clear seasonal variation. Composition profiles indicated that the JRE was mainly contaminated by short-chain perfluoroalkyl carboxylic acids (PFCAs), shipbuilding industry, multiple wastewater and river runoff were identified as major potential sources. Copyright © 2018 Elsevier B.V. All rights reserved.

Spatiotemporal evolution of cavitation dynamics exhibited by flowing microbubbles during ultrasound exposure.

PubMed

Choi, James J; Coussios, Constantin-C

2012-11-01

Ultrasound and microbubble-based therapies utilize cavitation to generate bioeffects, yet cavitation dynamics during individual pulses and across consecutive pulses remain poorly understood under physiologically relevant flow conditions. SonoVue(®) microbubbles were made to flow (fluid velocity: 10-40 mm/s) through a vessel in a tissue-mimicking material and were exposed to ultrasound [frequency: 0.5 MHz, peak-rarefactional pressure (PRP): 150-1200 kPa, pulse length: 1-100,000 cycles, pulse repetition frequency (PRF): 1-50 Hz, number of pulses: 10-250]. Radiated emissions were captured on a linear array, and passive acoustic mapping was used to spatiotemporally resolve cavitation events. At low PRPs, stable cavitation was maintained throughout several pulses, thus generating a steady rise in energy with low upstream spatial bias within the focal volume. At high PRPs, inertial cavitation was concentrated in the first 6.3 ± 1.3 ms of a pulse, followed by an energy reduction and high upstream bias. Multiple pulses at PRFs below a flow-dependent critical rate (PRF(crit)) produced predictable and consistent cavitation dynamics. Above the PRF(crit), energy generated was unpredictable and spatially biased. In conclusion, key parameters in microbubble-seeded flow conditions were matched with specific types, magnitudes, distributions, and durations of cavitation; this may help in understanding empirically observed in vivo phenomena and guide future pulse sequence designs.

Self-formed meandering river created in the laboratory using an upstream migrating boundary

NASA Astrophysics Data System (ADS)

van Dijk, W. M.; van de Lageweg, W. I.; Kleinhans, M. G.

2010-12-01

Braided rivers are relatively easily formed in the laboratory, whereas self-formed meandering rivers in the lab have proven very difficult to form, indicating a lack of understanding of the necessary and sufficient conditions for meandering. Our objective is to create self-formed dynamic meandering rivers and floodplains in a laboratory. Early experiments attempted to initiate meandering with upstream inflow at a fixed angle different from the general flow direction. The resulting bends were fixed at one position, which is not the dynamic meandering observed in nature. Another important condition for meandering is to have banks stronger than the non-cohesive bed sediment, which has been attained by growing vegetation. Furthermore, finer or light-weight sediment has been used to let chute channels fill up where otherwise multi-thread channels would have evolved, which is braiding. Yet the fixed-angle inflow kept meander migration and channel belt width and complexity limited. We accomplished dynamic meandering in the laboratory by using an upstream migrating boundary, which simulates a meander migrating into the flume. Our experiments were conducted in a circulated flume of 11x6 meter, with a constant discharge and sediment feed consisting of a sediment mixture ranging from silt to fine gravel (Kleinhans et al., 2010, this conference). The downstream boundary is a lake into which the river built a branched fan delta (Van de Lageweg et al., 2010, this conference). The morphology was recorded by high-resolution (0.5 mm) line-laser scanning and digital Single Lens Reflex (SLR) camera used for channel-floodplain segmentation and particle size estimation, at an interval of 8 hours. Furthermore a large number of smaller-scale auxiliary experiments were conducted to explore meandering tendency in a large range of parameters. Initial alternate ‘forced’ bars were formed at fixed positions with low sinuosity when the upstream boundary was at one fixed position. Migration of the upstream boundary caused further erosion of the outer banks and formation of point bars in inner bends, so that sinuosity increased to about 1.25. When the upstream boundary reversed migration direction chute cut-offs formed and meander bends reformed in the opposite direction. Hence in the first meander sweep the reworked floodplain showed nodes and antinodes at a wave length in agreement with linear bar stability analysis. After 260 hours experimental time the floodplain had become much more complex, exhibiting meandering channels, point bars, chutes, abandoned and partially filled channels, and slightly cohesive floodplains similar to natural meandering gravel-bed rivers such as the Allier near Moulins (France) and the Rhine near Emmerich (Germany). The flow became even more confined to a single-thread channel when pulses of silica flour were fed during short flood events, which significantly enhanced cohesive floodplain formation. The strengthened floodplains decreased channel mobility, however. We conclude that the necessary and sufficient conditions for meandering are a dynamic upstream boundary and active floodplain formation by fines.

Thermal conductivity of disperse insulation materials and their mixtures

NASA Astrophysics Data System (ADS)

Geža, V.; Jakovičs, A.; Gendelis, S.; Usiļonoks, I.; Timofejevs, J.

2017-10-01

Development of new, more efficient thermal insulation materials is a key to reduction of heat losses and contribution to greenhouse gas emissions. Two innovative materials developed at Thermeko LLC are Izoprok and Izopearl. This research is devoted to experimental study of thermal insulation properties of both materials as well as their mixture. Results show that mixture of 40% Izoprok and 60% of Izopearl has lower thermal conductivity than pure materials. In this work, material thermal conductivity dependence temperature is also measured. Novel modelling approach is used to model spatial distribution of disperse insulation material. Computational fluid dynamics approach is also used to estimate role of different heat transfer phenomena in such porous mixture. Modelling results show that thermal convection plays small role in heat transfer despite large fraction of air within material pores.

Novel associations between contaminant body burdens and biomarkers of reproductive condition in male Common Carp along multiple gradients of contaminant exposure in Lake Mead National Recreation Area, USA

USGS Publications Warehouse

Patino, Reynaldo; VanLandeghem, Matthew M.; Goodbred, Steven L.; Orsak, Erik; Jenkins, Jill A.; Echols, Kathy R.; Rosen, Michael R.; Torres, Leticia

2015-01-01

Adult male Common Carp were sampled in 2007/08 over a full reproductive cycle at Lake Mead National Recreation Area. Sites sampled included a stream dominated by treated wastewater effluent, a lake basin receiving the streamflow, an upstream lake basin (reference), and a site below Hoover Dam. Individual body burdens for 252 contaminants were measured, and biological variables assessed included physiological [plasma vitellogenin (VTG), estradiol-17β (E2), 11-ketotestosterone (11KT)] and organ [gonadosomatic index (GSI)] endpoints. Patterns in contaminant composition and biological condition were determined by Principal Component Analysis, and their associations modeled by Principal Component Regression. Three spatially distinct but temporally stable gradients of contaminant distribution were recognized: a contaminant mixture typical of wastewaters (PBDEs, methyl triclosan, galaxolide), PCBs, and DDTs. Two spatiotemporally variable patterns of biological condition were recognized: a primary pattern consisting of reproductive condition variables (11KT, E2, GSI), and a secondary pattern including general condition traits (condition factor, hematocrit, fork length). VTG was low in all fish, indicating low estrogenic activity of water at all sites. Wastewater contaminants associated negatively with GSI, 11KT and E2; PCBs associated negatively with GSI and 11KT; and DDTs associated positively with GSI and 11KT. Regression of GSI on sex steroids revealed a novel, nonlinear association between these variables. Inclusion of sex steroids in the GSI regression on contaminants rendered wastewater contaminants nonsignificant in the model and reduced the influence of PCBs and DDTs. Thus, the influence of contaminants on GSI may have been partially driven by organismal modes-of-action that include changes in sex steroid production. The positive association of DDTs with 11KT and GSI suggests that lifetime, sub-lethal exposures to DDTs have effects on male carp opposite of those reported by studies where exposure concentrations were relatively high. Lastly, this study highlighted advantages of multivariate/multiple regression approaches for exploring associations between complex contaminant mixtures and gradients and reproductive condition in wild fishes.

Novel associations between contaminant body burdens and biomarkers of reproductive condition in male Common Carp along multiple gradients of contaminant exposure in Lake Mead National Recreation Area, USA.

PubMed

Patiño, Reynaldo; VanLandeghem, Matthew M; Goodbred, Steven L; Orsak, Erik; Jenkins, Jill A; Echols, Kathy; Rosen, Michael R; Torres, Leticia

2015-08-01

Adult male Common Carp were sampled in 2007/08 over a full reproductive cycle at Lake Mead National Recreation Area. Sites sampled included a stream dominated by treated wastewater effluent, a lake basin receiving the streamflow, an upstream lake basin (reference), and a site below Hoover Dam. Individual body burdens for 252 contaminants were measured, and biological variables assessed included physiological [plasma vitellogenin (VTG), estradiol-17β (E2), 11-ketotestosterone (11KT)] and organ [gonadosomatic index (GSI)] endpoints. Patterns in contaminant composition and biological condition were determined by Principal Component Analysis, and their associations modeled by Principal Component Regression. Three spatially distinct but temporally stable gradients of contaminant distribution were recognized: a contaminant mixture typical of wastewaters (PBDEs, methyl triclosan, galaxolide), PCBs, and DDTs. Two spatiotemporally variable patterns of biological condition were recognized: a primary pattern consisting of reproductive condition variables (11KT, E2, GSI), and a secondary pattern including general condition traits (condition factor, hematocrit, fork length). VTG was low in all fish, indicating low estrogenic activity of water at all sites. Wastewater contaminants associated negatively with GSI, 11KT and E2; PCBs associated negatively with GSI and 11KT; and DDTs associated positively with GSI and 11KT. Regression of GSI on sex steroids revealed a novel, nonlinear association between these variables. Inclusion of sex steroids in the GSI regression on contaminants rendered wastewater contaminants nonsignificant in the model and reduced the influence of PCBs and DDTs. Thus, the influence of contaminants on GSI may have been partially driven by organismal modes-of-action that include changes in sex steroid production. The positive association of DDTs with 11KT and GSI suggests that lifetime, sub-lethal exposures to DDTs have effects on male carp opposite of those reported by studies where exposure concentrations were relatively high. Lastly, this study highlighted advantages of multivariate/multiple regression approaches for exploring associations between complex contaminant mixtures and gradients and reproductive condition in wild fishes. Published by Elsevier Inc.

Analysis of TCE Fate and Transport in Karst Groundwater Systems Using Statistical Mixed Models

NASA Astrophysics Data System (ADS)

Anaya, A. A.; Padilla, I. Y.

2012-12-01

Karst groundwater systems are highly productive and provide an important fresh water resource for human development and ecological integrity. Their high productivity is often associated with conduit flow and high matrix permeability. The same characteristics that make these aquifers productive also make them highly vulnerable to contamination and a likely for contaminant exposure. Of particular interest are trichloroethylene, (TCE) and Di-(2-Ethylhexyl) phthalate (DEHP). These chemicals have been identified as potential precursors of pre-term birth, a leading cause of neonatal complications with a significant health and societal cost. Both of these contaminants have been found in the karst groundwater formations in this area of the island. The general objectives of this work are to: (1) develop fundamental knowledge and determine the processes controlling the release, mobility, persistence, and possible pathways of contaminants in karst groundwater systems, and (2) characterize transport processes in conduit and diffusion-dominated flow under base flow and storm flow conditions. The work presented herein focuses on the use of geo-hydro statistical tools to characterize flow and transport processes under different flow regimes, and their application in the analysis of fate and transport of TCE. Multidimensional, laboratory-scale Geo-Hydrobed models (GHM) were used for this purpose. The models consist of stainless-steel tanks containing karstified limestone blocks collected from the karst aquifer formation of northern Puerto Rico. The models integrates a network of sampling wells to monitor flow, pressure, and solute concentrations temporally and spatially. Experimental work entails injecting dissolved CaCl2 tracers and TCE in the upstream boundary of the GHM while monitoring TCE and tracer concentrations spatially and temporally in the limestone under different groundwater flow regimes. Analysis of the temporal and spatial concentration distributions of solutes indicates a highly heterogeneous system resulting in large preferential flow components. The distributions are highly correlated with statistically-developed spatial flow models. High degree of tailing in breakthrough curves indicate significant amount of mass limitations, particularly in diffuse flow regions. Higher flow rates in the system result in increasing preferential flow region volumes, but lower mass transfer limitations. Future work will involve experiments with non-aqueous phase liquid TCE, DEHP, and a mixture of these, and geo-temporal statistical modeling. This work is supported by the U.S. Department of Energy, Savannah River (Grant Award No. DE-FG09-07SR22571), and the National Institute of Environmental Health Sciences (NIEHS, Grant Award No. P42ES017198).

Testing of electroformed deposited iridium/powder metallurgy rhenium rockets

NASA Technical Reports Server (NTRS)

Reed, Brian D.; Dickerson, Robert

1996-01-01

High-temperature, oxidation-resistant chamber materials offer the thermal margin for high performance and extended lifetimes for radiation-cooled rockets. Rhenium (Re) coated with iridium (Ir) allow hours of operation at 2200 C on Earth-storable propellants. One process for manufacturing Ir/Re rocket chambers is the fabrication of Re substrates by powder metallurgy (PM) and the application of Ir coatings by using electroformed deposition (ED). ED Ir coatings, however, have been found to be porous and poorly adherent. The integrity of ED Ir coatings could be improved by densification after the electroforming process. This report summarizes the testing of two 22-N, ED Ir/PM Re rocket chambers that were subjected to post-deposition treatments in an effort to densify the Ir coating. One chamber was vacuum annealed, while the other chamber was subjected to hot isostatic pressure (HIP). The chambers were tested on gaseous oxygen/gaseous hydrogen propellants, at mixture ratios that simulated the oxidizing environments of Earth-storable propellants. ne annealed ED Ir/PM Re chamber was tested for a total of 24 firings and 4.58 hr at a mixture ratio of 4.2. After only 9 firings, the annealed ED Ir coating began to blister and spall upstream of the throat. The blistering and spalling were similar to what had been experienced with unannealed, as-deposited ED Ir coatings. The HIP ED Ir/PM Re chamber was tested for a total of 91 firings and 11.45 hr at mixture ratios of 3.2 and 4.2. The HIP ED Ir coating remained adherent to the Re substrate throughout testing; there were no visible signs of coating degradation. Metallography revealed, however, thinning of the HIP Ir coating and occasional pores in the Re layer upstream of the throat. Pinholes in the Ir coating may have provided a path for oxidation of the Re substrate at these locations. The HIP ED Ir coating proved to be more effective than vacuum annealed and as-deposited ED Ir. Further densification is still required to match the integrity of chemically vapor deposited Ir coatings. Despite this, the successful long duration testing of the HIP ED Ir chamber, in an oxidizing environment comparable to Earth-storable propellants, demonstrated the viability of this Ir/Re rocket fabrication process.

Using virtual 3-D plant architecture to assess fungal pathogen splash dispersal in heterogeneous canopies: a case study with cultivar mixtures and a non-specialized disease causal agent

PubMed Central

Gigot, C.; de Vallavieille-Pope, C.; Huber, L.; Saint-Jean, S.

2014-01-01

Background and Aims Recent developments in plant disease management have led to a growing interest in alternative strategies, such as increasing host diversity and decreasing the use of pesticides. Use of cultivar mixtures is one option, allowing the spread of plant epidemics to be slowed down. As dispersal of fungal foliar pathogens over short distances by rain-splash droplets is a major contibutor to the spread of disease, this study focused on modelling the physical mechanisms involved in dispersal of a non-specialized pathogen within heterogeneous canopies of cultivar mixtures, with the aim of optimizing host diversification at the intra-field level. Methods Virtual 3-D wheat-like plants (Triticum aestivum) were used to consider interactions between plant architecture and disease progression in heterogeneous canopies. A combined mechanistic and stochastic model, taking into account splash droplet dispersal and host quantitative resistance within a 3-D heterogeneous canopy, was developed. It consists of four sub-models that describe the spatial patterns of two cultivars within a complex canopy, the pathway of rain-splash droplets within this canopy, the proportion of leaf surface area impacted by dispersal via the droplets and the progression of disease severity after each dispersal event. Key Results Different spatial organization, proportions and resistance levels of the cultivars of two-component mixtures were investigated. For the eight spatial patterns tested, the protective effect against disease was found to vary by almost 2-fold, with the greatest effect being obtained with the smallest genotype unit area, i.e. the ground area occupied by an independent unit of the host population that is genetically homogeneous. Increasing both the difference between resistance levels and the proportion of the most resistant cultivar often resulted in a greater protective effect; however, this was not observed for situations in which the most resistant of the two cultivars in the mixture had a relatively low level of resistance. Conclusions The results show agreement with previous data obtained using experimental approaches. They demonstrate that in order to maximize the potential mixture efficiency against a splash-dispersed pathogen, optimal susceptible/resistant cultivar proportions (ranging from 1/9 to 5/5) have to be established based on host resistance levels. The results also show that taking into account dispersal processes in explicit 3-D plant canopies can be a key tool for investigating disease progression in heterogeneous canopies such as cultivar mixtures. PMID:24989786

Application of the high throughput Attagene Factorial TM ...

EPA Pesticide Factsheets

Bioassays can be employed to evaluate the integrated effects of complex mixtures of both known and unidentified contaminants present in environmental samples. However, such methods have typically focused on one or a few pathways despite the fact that the chemicals in a mixture may exhibit a wide range of activities. High throughput toxicology approaches that can rapidly screen samples for a broad diversity of biological activities offer a means to provide a more comprehensive characterization of complex mixtures. To test this concept, twenty-four ambient water samples were collected, extracted, and screened for their ability to interact with or modulate over 80 different transcription factors using the Attagene FactorialTM platform utilized by the US EPA’s ToxCast Program. Samples evaluated included 10 water samples collected in varying proximity to a wastewater discharge into the St. Louis River, MN; water collected at five sites along a gradient centered on a wastewater discharge into the Maumee River, Ohio, USA; and eight samples collected in association with a nation-wide USGS surface streams study. For samples collected along the St. Louis River, the greatest number of biological activities were observed at locations closest to wastewater discharge with up to 13 endpoints responding. The Maumee River showed a gradient response in the number of observed activities, ranging from three positive responses observed far upstream of a wastewater discharge to 10

Landscape-based upstream-downstream prevalence of land-use/cover change drivers in southeastern rift escarpment of Ethiopia.

PubMed

Temesgen, Habtamu; Wu, Wei; Legesse, Abiyot; Yirsaw, Eshetu; Bekele, Belew

2018-02-23

Characterized by high population density on a rugged topography, the Gedeo-Abaya landscape dominantly contains a multi-strata traditional agroforests showing the insight of Gedeo farmers on natural resource management practices. Currently, this area has been losing its resilience and is becoming unable to sustain its inhabitants. Based on both RS-derived and GIS-computed land-use/cover changes (LUCC) as well as socioeconomic validations, this article explored the LUCC and agroecological-based driver patterns in Gedeo-Abaya landscape from 1986 to 2015. A combination of geo-spatial technology and cross-sectional survey design were employed to detect the drivers behind these changes. The article discussed that LUCC and the prevalence of drivers are highly diverse and vary throughout agroecological zones. Except for the population, most downstream top drivers are perceived as insignificant in the upstream region and vice versa. In the downstream, land-use/cover (LUC) classes are more dynamic, diverse, and challenged by nearly all anticipated drivers than are upstream ones. Agroforestry LUC has been increasing (by 25% of its initial cover) and is becoming the predominant cover type, although socioeconomic analysis and related findings show its rapid LUC modification. A rapid reduction of woodland/shrubland (63%) occurred in the downstream, while wetland/marshy land increased threefold (158%), from 1986 to 2015 with annual change rates of - 3.7 and + 6%, respectively. Land degradation induced by changes in land use is a serious problem in Africa, especially in the densely populated sub-Saharan regions such as Ethiopia (FAO 2015). Throughout the landscape, LUCC is prominently affecting land-use system of the study landscape due to population pressure in the upstream region and drought/rainfall variability, agribusiness investment, and charcoaling in the downstream that necessitate urgent action.

[Residue Concentration and Distribution Characteristics of Perfluorinated Compounds in Surface Water from Qiantang River in Hangzhou Section].

PubMed

Zhang, Ming; Tang, Fang-liang; Yu, Ya-yun; Xu, Jian-fen; Li, Hua; Wu, Min-hua; Zhang, Wei; Pan, Jian-yang

2015-12-01

This study studied the pollution characteristics of perfluorinated compounds (PFCs) in Qiantang River in Hangzhou section (QR). Surface water samples, collected in July 2014 and January 2015 from 14 sites in QR were analyzed for 16 PFCs. All samples were prepared by solid-phase extraction with Oasis WAX cartridges and analyzed using the ultra performance liquid chromatography interfaced to tandem mass spectrometry ( UPLC-MS/MS). The results showed that 8 medium-and short-chain PFCs including C₄ and C₈ perfluorinated sulfonates (PFSAs) and C₄-C₉ perfluorinated carboxylic acids (PFCAs) were detected in the surface waters. The total concentrations of PFCs ranged from 0.98 to 609 ng · L⁻¹, while perfluorooctanoic acid (PFOA) dominated, with range of 0.59-538 ng L⁻¹, and perfluorooctane sulfonate (PFOS) was detected at lower levels, ranging from 0 to 2.48 ng · L⁻¹. The spatial distribution of PFCs varied, and the pollutant concentrations at the sampling sites located in upstream of the river such as Lanjiangkou and Jiangjunyan were relatively high, PFCs concentration showed a decreasing trend from the upstream to the downstream. According to the ratio of feature components, PFCs in surface water of QR originated largely from the input of direct sewage emissions. Taken together, the PFCs pollution was highly correlated with the upstream of Qiantang River valley's industry distribution, and most of the mass load in the investigated river was attributed to upstream running water with a minor influence from the wastewater discharges along the river basin. Overall, the results presented here indicated that greater attention should be given to the contamination of PFCs, especially for PFOA in water body of QR.

Location Is Everything: Evaluating the Effects of Terrestrial and Marine Resource Subsidies on an Estuarine Bivalve

PubMed Central

Harding, Joel M. S.; Segal, Michelle R.; Reynolds, John D.

2015-01-01

Estuaries are amongst the world’s most productive ecosystems, lying at the intersection between terrestrial and marine environments. They receive substantial inputs from adjacent landscapes but the importance of resource subsidies is not well understood. Here, we test hypotheses for the effects of both terrestrial- and salmon-derived resource subsidies on the diet (inferred from stable isotopes of muscle tissue), size and percent nitrogen of the soft-shell clam (Mya arenaria), a sedentary estuarine consumer. We examine how these relationships shift across natural gradients among 14 estuaries that vary in upstream watershed size and salmon density on the central coast of British Columbia, Canada. We also test how assimilation and response to subsidies vary at smaller spatial scales within estuaries. The depletion and enrichment of stable isotope ratios in soft-shell clam muscle tissue correlated with increasing upstream watershed size and salmon density, respectively. The effects of terrestrial- and salmon-derived subsidies were also strongest at locations near stream outlets. When we controlled for age of individual clams, there were larger individuals with higher percent nitrogen content in estuaries below larger watersheds, though this effect was limited to the depositional zones below river mouths. Pink salmon exhibited a stronger effect on isotope ratios of clams than chum salmon, which could reflect increased habitat overlap as spawning pink salmon concentrate in lower stream reaches, closer to intertidal clam beds. However, there were smaller clams in estuaries that had higher upstream pink salmon densities, possibly due to differences in habitat requirements. Our study highlights the importance of upstream resource subsidies to this bivalve species, but that individual responses to subsidies can vary at smaller scales within estuaries. PMID:25993002

A Laboratory Experiment on the Evolution of a Sand Gravel Reach Under a Lack of Sediment Supply

NASA Astrophysics Data System (ADS)

Orru, C.; Chavarrias, V.; Ferrara, V.; Blom, A.

2014-12-01

A flume experiment was conducted to examine the evolution of a sand-gravel reach under a lack of sediment supply. The experimental data are used to validate a numerical sand-gravel model. A bed composed of a bi-modal sediment mixture is installed with a uniform slope and an imposed gradual fining pattern. Initially, the sand fraction gradually increases in streamwise direction until the bed is fully composed of sand. The water discharge and downstream water level were constant, and the sediment feed rate was equal to zero. The experiment was dominated by bed load, partial transport, and a subcritical flow regime was imposed. The flow rate was such that only sand was mobile (partial transport), which led to a coarsening over the upstream reach and a gradual reduction of the sediment transport rate during the experiment. New equipment was used to measure the evolution of the grain size distribution of the bed surface during the experiment over the entire flume using image analysis. In the upstream reach we observed a gradual coarsening over time and the formation of an armour layer, which resulted in a more abrupt transition in grain size of the bed surface. Bed degradation increased in streamwise direction. This is due to the initial streamwise increase in the availability of sand in the bed. The different volume fraction content of sand in the bed allowed for the gravel to sink more in the downstream part of the upstream reach. The sand reach suffered from a larger degradation. Finally, we see one reach dominated by sand, small bedforms, and a small bed slope, and a gravel reach dominated by a larger bed slope.

More milk from forage: Milk production, blood metabolites, and forage intake of dairy cows grazing pasture mixtures and spatially adjacent monocultures.

PubMed

Pembleton, Keith G; Hills, James L; Freeman, Mark J; McLaren, David K; French, Marion; Rawnsley, Richard P

2016-05-01

There is interest in the reincorporation of legumes and forbs into pasture-based dairy production systems as a means of increasing milk production through addressing the nutritive value limitations of grass pastures. The experiments reported in this paper were undertaken to evaluate milk production, blood metabolite concentrations, and forage intake levels of cows grazing either pasture mixtures or spatially adjacent monocultures containing perennial ryegrass (Lolium perenne), white clover (Trifolium repens), and plantain (Plantago lanceolata) compared with cows grazing monocultures of perennial ryegrass. Four replicate herds, each containing 4 spring-calving, cross-bred dairy cows, grazed 4 different forage treatments over the periods of early, mid, and late lactation. Forage treatments were perennial ryegrass monoculture (PRG), a mixture of white clover and plantain (CPM), a mixture of perennial ryegrass, white clover, and plantain (RCPM), and spatially adjacent monocultures (SAM) of perennial ryegrass, white clover, and plantain. Milk volume, milk composition, blood fatty acids, blood β-hydroxybutyrate, blood urea N concentrations, live weight change, and estimated forage intake were monitored over a 5-d response period occurring after acclimation to each of the forage treatments. The acclimation period for the early, mid, and late lactation experiments were 13, 13, and 10 d, respectively. Milk yield (volume and milk protein) increased for cows grazing the RCPM and SAM in the early lactation experiment compared with cows grazing the PRG, whereas in the mid lactation experiment, milk fat increased for the cows grazing the RCPM and SAM when compared with the PRG treatments. Improvements in milk production from grazing the RCPM and SAM treatments are attributed to improved nutritive value (particularly lower neutral detergent fiber concentrations) and a potential increase in forage intake. Pasture mixtures or SAM containing plantain and white clover could be a strategy for alleviating the nutritive limitations of perennial ryegrass monocultures, leading to an increase in milk production for spring calving dairy cows during early and mid lactation. Copyright © 2016 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Thermal Fluxes and Temperatures in Small Urban Headwater Streams of the BES LTER: Landscape Forest and Impervious Patches and the Importance of Spatial and Temporal Scales

NASA Astrophysics Data System (ADS)

Kim, H.; Belt, K. T.; Welty, C.; Heisler, G.; Pouyat, R. V.; McGuire, M. P.; Stack, W. P.

2006-05-01

Water and material fluxes from urban landscape patches to small streams are modulated by extensive "engineered" drainage networks. Small urban headwater catchments are different in character and function from their larger receiving streams because of their extensive, direct connections to impervious surface cover (ISC) and their sometimes buried nature. They need to be studied as unique functional hydrologic units if impacts on biota are to be fully understood. As part of the Baltimore Ecosystem Study LTER project, continuous water temperature data are being collected at 2-minute intervals at over twenty small catchments representing various mixtures of forest and ISC. Suburban stream sites with greater ISC generally have higher summer water temperatures. Suburban catchments with most of their channel drainage contained within storm drain pipes show subdued diurnal variation and cool temperatures, but with very large spikes in summer runoff events. Conversely, high ISC urban piped streams have elevated "baseline" temperatures that stand well above all the other monitoring sites. There is a pronounced upstream-downstream effect; nested small headwater catchments experience more frequent, larger temperature spikes related to runoff events than downstream sites. Also, runoff-initiated temperature elevations at small stream sites unexpectedly last much longer than the storm runoff hydrographs. These observations suggest that for small headwater catchments, urban landscapes not only induce an ambient, "heat island" effect on stream temperatures, but also introduce thermal disturbance regimes and fluxes that are not trivial to aquatic biota.

Influence of Asian dust storms on air quality in Taiwan.

PubMed

Liu, Chung-Ming; Young, Chea-Yuan; Lee, Yen-Chih

2006-09-15

In each year, dust storms triggered by cold air masses passing through northern China and Mongolia enhance the PM10 concentration over Taiwan region during winter and spring. On average, there are four to five dust events and 6.1 dust days in a year in Taiwan. Each event lasts for 1 day or even longer. A procedure to identify a dust event is rationalized and exercised on data collected during 1994-2005. Also, a ranking method named as the dust intensity rank (DIR) is developed to distinguish the intensity of each event affecting the local air quality. About 86% of dust days belong to ranks 1 and 2. In general, poorer air quality is associated with higher ranks. Ranks 4 and 5 correspond to a PSI (Pollution Standard Index) larger than 100. Linking DIR with the popular PSI is useful for both the public and the official forecasting system. It is also useful for inter-comparison between dust influences on air quality at different downstream regions in Taiwan. Composite analyses of the temporal and spatial variation of the hourly PM10 level indicate that dust particles usually arrive 12 h before the time of the peak PM10 concentration and last for 36 h at northern Taiwan, while the time of the peak concentration at eastern or western Taiwan, due to the evolution of the synoptic weather system, is about 3-12 h later. It is noted that the increase of PM10 level at the western side of Taiwan results from a mixture of upstream Asian dust inputs and local pollutants.

Downstream lightening and upward heavying, sorting of sediments of uniform grain size but differing in density

NASA Astrophysics Data System (ADS)

Viparelli, E.; Solari, L.; Hill, K. M.

2014-12-01

Downstream fining, i.e. the tendency for a gradual decrease in grain size in the downstream direction, has been observed and studied in alluvial rivers and in laboratory flumes. Laboratory experiments and field observations show that the vertical sorting pattern over a small Gilbert delta front is characterized by an upward fining profile, with preferential deposition of coarse particles in the lowermost part of the deposit. The present work is an attempt to answer the following questions. Are there analogous sorting patterns in mixtures of sediment particles having the same grain size but differing density? To investigate this, we performed experiments at the Hydrosystems Laboratory at the University of Illinois at Urbana-Champaign. During the experiments a Gilbert delta formed and migrated downstream allowing for the study of transport and sorting processes on the surface and within the deposit. The experimental results show 1) preferential deposition of heavy particles in the upstream part of the deposit associated with a pattern of "downstream lightening"; and 2) a vertical sorting pattern over the delta front characterized by a pattern of "upward heavying" with preferential deposition of light particles in the lowermost part of the deposit. The observed downstream lightening is analogous of the downstream fining with preferential deposition of heavy (coarse) particles in the upstream part of the deposit. The observed upward heavying was unexpected because, considering the particle mass alone, the heavy (coarse) particles should have been preferentially deposited in the lowermost part of the deposit. Further, the application of classical fractional bedload transport relations suggests that in the case of mixtures of particles of uniform size and different densities equal mobility is not approached. We hypothesize that granular physics mechanisms traditionally associated with sheared granular flows may be responsible for the observed upward heavying and for the deviation from equal mobility.

The pitcher plant flesh fly exhibits a mixture of patchy and metapopulation attributes.

PubMed

Rasic, Gordana; Keyghobadi, Nusha

2012-01-01

We investigated the pattern of spatial genetic structure and the extent of gene flow in the pitcher plant flesh fly Fletcherimyia fletcheri, the largest member of the inquiline community of the purple pitcher plant Sarracenia purpurea. Using microsatellite loci, we tested the theoretical predictions of different hypothesized population models (patchy population, metapopulation, or isolated populations) among 11 bogs in Algonquin Provincial Park (Canada). Our results revealed that the pitcher plant flesh fly exhibits a mixture of patchy and metapopulation characteristics. There is significant differentiation among bogs and limited gene flow at larger spatial scales, but local populations do not experience frequent local extinctions/recolonizations. Our findings suggest a strong dispersal ability and stable population sizes in F. fletcheri, providing novel insights into the ecology of this member of a unique ecological microcosm.

Raman line imaging for spatially and temporally resolved mole fraction measurements in internal combustion engines.

PubMed

Miles, P C

1999-03-20

An optical diagnostic system based on line imaging of Raman-scattered light has been developed to study the mixing processes in internal combustion engines. The system permits multipoint, single laser-shot measurements of CO(2), O(2), N(2), C(3)H(8), and H(2)O mole fractions with submillimeter spatial resolution. Selection of appropriate system hardware is discussed, as are subsequent data reduction and analysis procedures. Results are reported for data obtained at multiple crank angles and in two different engine flow fields. Measurements are made at 12 locations simultaneously, each location having measurement volume dimensions of 0.5 mm x 0.5 mm x 0.9 mm. The data are analyzed to obtain statistics of species mole fractions: mean, rms, histograms, and both spatial and cross-species covariance functions. The covariance functions are used to quantify the accuracy of the measured rms mole fraction fluctuations, to determine the integral length scales of the mixture inhomogeneities, and to quantify the cycle-to-cycle fluctuations in bulk mixture composition under well-mixed conditions.

Study of axial double layer in helicon plasma by optical emission spectroscopy and simple probe

NASA Astrophysics Data System (ADS)

Gao, ZHAO; Wanying, ZHU; Huihui, WANG; Qiang, CHEN; Chang, TAN; Jiting, OUYANG

2018-07-01

In this work we used a passive measurement method based on a high-impedance electrostatic probe and an optical emission spectroscope (OES) to investigate the characteristics of the double layer (DL) in an argon helicon plasma. The DL can be confirmed by a rapid change in the plasma potential along the axis. The axial potential variation of the passive measurement shows that the DL forms near a region of strong magnetic field gradient when the plasma is operated in wave-coupled mode, and the DL strength increases at higher powers in this experiment. The emission intensity of the argon atom line, which is strongly dependent on the metastable atom concentration, shows a similar spatial distribution to the plasma potential along the axis. The emission intensity of the argon atom line and the argon ion line in the DL suggests the existence of an energetic electron population upstream of the DL. The electron density upstream is much higher than that downstream, which is mainly caused by these energetic electrons.

Evaluation of modeled bacteria loads along an impaired stream reach receiving discharge from a municipal separate storm sewer system in Independence, Mo.

USGS Publications Warehouse

Flickinger, Allison; Christensen, Eric D.

2017-01-01

The Little Blue River in Jackson County, Missouri, was listed as impaired in 2012 due to Escherichia coli (E. coli) from urban runoff and storm sewers. A study was initiated to characterize E. coli concentrations and loads to aid in the development of a total maximum daily load implementation plan. Longitudinal sampling along the stream revealed spatial and temporal variability in E. coli loads. Regression models were developed to better represent E. coli variability in the impaired reach using continuous hydrologic and water-quality parameters as predictive parameters. Daily loads calculated from main-stem samples were significantly higher downstream compared to upstream even though there was no significant difference between the upstream and downstream measured concentrations and no significant conclusions could be drawn from model-estimated loads due to model-associated uncertainty. Increasing sample frequency could decrease the bias and increase the accuracy of the modeled results.

On the Instability of Large Slopes in the Upstream of Wu River, Taiwan

NASA Astrophysics Data System (ADS)

Shou, Keh-Jian; Lin, Jia-Fei

2015-04-01

Considering the existence of various types of landslides (shallow and deep-seated) and the importance of protection targets (the landslide might affect a residential area, cut a road, isolate a village, etc.), this study aims to analyze the landslide susceptibility along the Lixing Industrial Road, i.e., Nantou County Road # 89, in the upstream of Wu River. Focusing on the selected typical large scale landslides, the data and information of the landslides were collected from the field and the government (including the local government, the Soil and Water Conservation Bureau, and the highway agencies). Based on the data of Li-DAR and the information from boreholes, the temporal behavior and the complex mechanism of large scale landslides were analyzed. To assess the spatial hazard of the landslides, probabilistic analysis was applied. The study of the landslide mechanism can help to understand the behavior of landslides in similar geologic conditions, and the results of hazard analysis can be applied for risk prevention and management in the study area.

On the role of the quasi-parallel bow shock in ion pickup - A lesson from Venus?

NASA Technical Reports Server (NTRS)

Luhmann, J. G.; Russell, C. T.; Phillips, J. L.; Barnes, A.

1987-01-01

Previous observations at Venus show convincing evidence of planetary O(+) ion pickup by the largescale motional -V x B electric field in the magnetosheath when the interplanetary magnetic field is perpendicular to the solar wind flow. However, the presence of magnetic field fluctuations in the magnetosheath downstream from the quasi-parallel bow shock should allow pickup to occur even when the upstream magnetic field B and plasma velocity V are practically coaligned. Single-particle calculations are used to demonstrate the convecting magnetic field fluctuations similar to those observed in the Venus magnetosheath when the subsolar bow shock is quasi-parallel can efficiently accelerate cold planetary ions by means of the electric field associated with their transverse components. This ion pickup process, which is characterized by a spatial dependence determined by the bow shock shape and the orientation of the upstream magnetic field, is likely also to occur at Mars and may be effective at comets.

Microphase Separation in Oil-Water Mixtures Containing Hydrophilic and Hydrophobic Ions

NASA Astrophysics Data System (ADS)

Tasios, Nikos; Samin, Sela; van Roij, René; Dijkstra, Marjolein

2017-11-01

We develop a lattice-based Monte Carlo simulation method for charged mixtures capable of treating dielectric heterogeneities. Using this method, we study oil-water mixtures containing an antagonistic salt, with hydrophilic cations and hydrophobic anions. Our simulations reveal several phases with a spatially modulated solvent composition, in which the ions partition between water-rich and water-poor regions according to their affinity. In addition to the recently observed lamellar phase, we find tubular and droplet phases, reminiscent of those found in block copolymers and surfactant systems. Interestingly, these structures stem from ion-mediated interactions, which allows for tuning of the phase behavior via the concentrations, the ionic properties, and the temperature.

Identification of temporal and spatial signatures of broadband shock-associated noise

NASA Astrophysics Data System (ADS)

Pérez Arroyo, C.; Daviller, G.; Puigt, G.; Airiau, C.; Moreau, S.

2018-02-01

Broadband shock-associated noise (BBSAN) is a particular high-frequency noise that is generated in imperfectly expanded jets. BBSAN results from the interaction of turbulent structures and the series of expansion and compression waves which appears downstream of the convergent nozzle exit of moderately under-expanded jets. This paper focuses on the impact of the pressure waves generated by BBSAN from a large eddy simulation of a non-screeching supersonic round jet in the near-field. The flow is under-expanded and is characterized by a high Reynolds number Re_j = 1.25× 10^6 and a transonic Mach number M_j=1.15 . It is shown that BBSAN propagates upstream outside the jet and enters the supersonic region leaving a characteristic pattern in the physical plane. This pattern, also called signature, travels upstream through the shock-cell system with a group velocity between the acoustic speed Uc-a_∞ and the sound speed a_∞ in the frequency-wavenumber domain (U_c is the convective jet velocity). To investigate these characteristic patterns, the pressure signals in the jet and the near-field are decomposed into waves traveling downstream (p^+ ) and waves traveling upstream (p^- ). A novel study based on a wavelet technique is finally applied on such signals in order to extract the BBSAN signatures generated by the most energetic events of the supersonic jet.

Dissolved-Solids Load in Henrys Fork Upstream from the Confluence with Antelope Wash, Wyoming, Water Years 1970-2009

USGS Publications Warehouse

Foster, Katharine; Kenney, Terry A.

2010-01-01

Annual dissolved-solids load at the mouth of Henrys Fork was estimated by using data from U.S. Geological Survey streamflow-gaging station 09229500, Henrys Fork near Manila, Utah. The annual dissolved-solids load for water years 1970-2009 ranged from 18,300 tons in 1977 to 123,300 tons in 1983. Annual streamflows for this period ranged from 14,100 acre-feet in 1977 to 197,500 acre-feet in 1983. The 25-percent trimmed mean dissolved-solids load for water years 1970-2009 was 44,300 tons per year at Henrys Fork near Manila, Utah. Previous simulations using a SPAtially Referenced Regression On Watershed attributes (SPARROW) model for dissolved solids specific to water year 1991 conditions in the Upper Colorado River Basin predicted an annual dissolved-solids load of 25,000 tons for the Henrys Fork Basin upstream from Antelope Wash. On the basis of computed dissolved-solids load data from Henrys Fork near Manila, Utah, together with estimated annual dissolved-solids load from Antelope Wash and Peoples Canal, this prediction was adjusted to 37,200 tons. As determined by simulations with the Upper Colorado River Basin SPARROW model, approximately 56 percent (14,000 tons per year) of the dissolved-solids load at Henrys Fork upstream from Antelope Wash is associated with the 21,500 acres of irrigated agricultural lands in the upper Henrys Fork Basin.

Multi-atlas segmentation for abdominal organs with Gaussian mixture models

NASA Astrophysics Data System (ADS)

Burke, Ryan P.; Xu, Zhoubing; Lee, Christopher P.; Baucom, Rebeccah B.; Poulose, Benjamin K.; Abramson, Richard G.; Landman, Bennett A.

2015-03-01

Abdominal organ segmentation with clinically acquired computed tomography (CT) is drawing increasing interest in the medical imaging community. Gaussian mixture models (GMM) have been extensively used through medical segmentation, most notably in the brain for cerebrospinal fluid / gray matter / white matter differentiation. Because abdominal CT exhibit strong localized intensity characteristics, GMM have recently been incorporated in multi-stage abdominal segmentation algorithms. In the context of variable abdominal anatomy and rich algorithms, it is difficult to assess the marginal contribution of GMM. Herein, we characterize the efficacy of an a posteriori framework that integrates GMM of organ-wise intensity likelihood with spatial priors from multiple target-specific registered labels. In our study, we first manually labeled 100 CT images. Then, we assigned 40 images to use as training data for constructing target-specific spatial priors and intensity likelihoods. The remaining 60 images were evaluated as test targets for segmenting 12 abdominal organs. The overlap between the true and the automatic segmentations was measured by Dice similarity coefficient (DSC). A median improvement of 145% was achieved by integrating the GMM intensity likelihood against the specific spatial prior. The proposed framework opens the opportunities for abdominal organ segmentation by efficiently using both the spatial and appearance information from the atlases, and creates a benchmark for large-scale automatic abdominal segmentation.

Hyper-Spectral Image Analysis With Partially Latent Regression and Spatial Markov Dependencies

NASA Astrophysics Data System (ADS)

Deleforge, Antoine; Forbes, Florence; Ba, Sileye; Horaud, Radu

2015-09-01

Hyper-spectral data can be analyzed to recover physical properties at large planetary scales. This involves resolving inverse problems which can be addressed within machine learning, with the advantage that, once a relationship between physical parameters and spectra has been established in a data-driven fashion, the learned relationship can be used to estimate physical parameters for new hyper-spectral observations. Within this framework, we propose a spatially-constrained and partially-latent regression method which maps high-dimensional inputs (hyper-spectral images) onto low-dimensional responses (physical parameters such as the local chemical composition of the soil). The proposed regression model comprises two key features. Firstly, it combines a Gaussian mixture of locally-linear mappings (GLLiM) with a partially-latent response model. While the former makes high-dimensional regression tractable, the latter enables to deal with physical parameters that cannot be observed or, more generally, with data contaminated by experimental artifacts that cannot be explained with noise models. Secondly, spatial constraints are introduced in the model through a Markov random field (MRF) prior which provides a spatial structure to the Gaussian-mixture hidden variables. Experiments conducted on a database composed of remotely sensed observations collected from the Mars planet by the Mars Express orbiter demonstrate the effectiveness of the proposed model.

Molecular dynamics simulations of polyethers and a quaternary ammonium ionic liquid as CO2 absorbers

NASA Astrophysics Data System (ADS)

Cardoso, Piercarlo Fortunato; Fernandez, Juan S. L. C.; Lepre, Luiz Fernando; Ando, Rômulo Augusto; Costa Gomes, Margarida F.; Siqueira, Leonardo J. A.

2018-04-01

The properties of mixtures of butyltrimethylammonium bis(trifluoromethylsulfonyl)imide, [N4111][NTf2], with poly(ethyleneglycol) dimethyl ether, PEO, were described as a function of PEO chain size by molecular dynamics simulations. Both PEO chain size and mixture composition revealed to play a significant role in determining the structure and the dynamics of the fluids. The remarkably higher viscosity observed for mixtures composed by 0.25 mole fraction of PEO was attributed to the increase in the gauche population of OCCO dihedral of the polyether of longer chains. The negative solvation enthalpy (ΔsolH < 0) and entropy (ΔsolS < 0) revealed a favorable CO2 absorption by the neat and mixture systems. The CO2 absorption was higher in neat PEO, particularly considering longer chains. The gas solubility in the mixtures presented intermediate values in comparison to the neat PEO and neat ionic liquid. The CO2 solutions had their structures discussed in the light of the calculated radial and spatial distribution functions.

Molecular dynamics simulations of polyethers and a quaternary ammonium ionic liquid as CO2 absorbers.

PubMed

Cardoso, Piercarlo Fortunato; Fernandez, Juan S L C; Lepre, Luiz Fernando; Ando, Rômulo Augusto; Costa Gomes, Margarida F; Siqueira, Leonardo J A

2018-04-07

The properties of mixtures of butyltrimethylammonium bis(trifluoromethylsulfonyl)imide, [N 4111 ][NTf 2 ], with poly(ethyleneglycol) dimethyl ether, PEO, were described as a function of PEO chain size by molecular dynamics simulations. Both PEO chain size and mixture composition revealed to play a significant role in determining the structure and the dynamics of the fluids. The remarkably higher viscosity observed for mixtures composed by 0.25 mole fraction of PEO was attributed to the increase in the gauche population of OCCO dihedral of the polyether of longer chains. The negative solvation enthalpy (Δ sol H < 0) and entropy (Δ sol S < 0) revealed a favorable CO 2 absorption by the neat and mixture systems. The CO 2 absorption was higher in neat PEO, particularly considering longer chains. The gas solubility in the mixtures presented intermediate values in comparison to the neat PEO and neat ionic liquid. The CO 2 solutions had their structures discussed in the light of the calculated radial and spatial distribution functions.

Lagrangian mass-flow investigations of inorganic contaminants in wastewater-impacted streams

USGS Publications Warehouse

Barber, L.B.; Antweiler, Ronald C.; Flynn, J.L.; Keefe, S.H.; Kolpin, D.W.; Roth, D.A.; Schnoebelen, D.J.; Taylor, Howard E.; Verplanck, P.L.

2011-01-01

Understanding the potential effects of increased reliance on wastewater treatment plant (WWTP) effluents to meet municipal, agricultural, and environmental flow requires an understanding of the complex chemical loading characteristics of the WWTPs and the assimilative capacity of receiving waters. Stream ecosystem effects are linked to proportions of WWTP effluent under low-flow conditions as well as the nature of the effluent chemical mixtures. This study quantifies the loading of 58 inorganic constituents (nutrients to rare earth elements) from WWTP discharges relative to upstream landscape-based sources. Stream assimilation capacity was evaluated by Lagrangian sampling, using flow velocities determined from tracer experiments to track the same parcel of water as it moved downstream. Boulder Creek, Colorado and Fourmile Creek, Iowa, representing two different geologic and hydrologic landscapes, were sampled under low-flow conditions in the summer and spring. One-half of the constituents had greater loads from the WWTP effluents than the upstream drainages, and once introduced into the streams, dilution was the predominant assimilation mechanism. Only ammonium and bismuth had significant decreases in mass load downstream from the WWTPs during all samplings. The link between hydrology and water chemistry inherent in Lagrangian sampling allows quantitative assessment of chemical fate across different landscapes. ?? 2011 American Chemical Society.

Wastewater disposal from unconventional oil and gas development degrades stream quality at a West Virginia injection facility

USGS Publications Warehouse

Akob, Denise M.; Mumford, Adam; Orem, William H.; Engle, Mark A.; Klinges, Julia (Grace); Kent, Douglas B.; Cozzarelli, Isabelle M.

2016-01-01

The development of unconventional oil and gas (UOG) resources has rapidly increased in recent years; however, the environmental impacts and risks are poorly understood. A single well can generate millions of liters of wastewater, representing a mixture of formation brine and injected hydraulic fracturing fluids. One of the most common methods for wastewater disposal is underground injection; we are assessing potential risks of this method through an intensive, interdisciplinary study at an injection disposal facility in West Virginia. In June 2014, waters collected downstream from the site had elevated specific conductance (416 μS/cm) and Na, Cl, Ba, Br, Sr, and Li concentrations, compared to upstream, background waters (conductivity, 74 μS/cm). Elevated TDS, a marker of UOG wastewater, provided an early indication of impacts in the stream. Wastewater inputs are also evident by changes in 87Sr/86Sr in streamwater adjacent to the disposal facility. Sediments downstream from the facility were enriched in Ra and had high bioavailable Fe(III) concentrations relative to upstream sediments. Microbial communities in downstream sediments had lower diversity and shifts in composition. Although the hydrologic pathways were not able to be assessed, these data provide evidence demonstrating that activities at the disposal facility are impacting a nearby stream and altering the biogeochemistry of nearby ecosystems.

Application of current and future satellite missions to hydrologic prediction in transboundary rivers

NASA Astrophysics Data System (ADS)

Biancamaria, S.; Clark, E.; Lettenmaier, D. P.

2010-12-01

More than 256 major global river basins, which cover about 45% of the continental land surface, are shared among two or more countries. The flow of such a large part of the global runoff across international boundaries has led to tension in many cases between upstream and downstream riparian countries. Among many examples, this is the case of the Ganges and the Brahmaputra Rivers, which cross the boundary between India and Bangladesh. Hydrological data (river discharge, reservoir storage) are viewed as sensitive by India (the upstream country) and are therefore not shared with Bangladesh, which can only monitor river discharge and water depth at the international border crossing. These measurements only allow forecasting of floods in the interior and southern portions of the country two to three days in advance. These forecasts are not long enough either for agricultural water management purposes (for which knowledge of upstream reservoir storage is essential) or for disaster preparedness purposes. Satellite observations of river spatial extent, surface slope, reservoir area and surface elevation have the potential to make tremendous changes in management of water within the basins. In this study, we examine the use of currently available satellite measurements (in India) and in-situ measurements in Bangladesh to increase forecast lead time in the Ganges and Brahmaputra Rivers. Using nadir altimeters, we find that it is possible to forecast the discharge of the Ganges River at the Bangladesh border with lead time 3 days and mean absolute error of around 25%. On the Ganges River, 2-day forecasts are possible with a mean absolute error of around 20%. When combined with optical/infra-red MODIS images, it is possible to map water elevations along the river and its floodplain upstream of the boundary, and to compute water storage. However, the high frequency of clouds in this region results in relatively large errors in the water mask. Due to the nadir altimeter temporal repeat (10 days for current satellites) and to gaps in the water mask, water volume estimates are meaningful only at the monthly scale. Furthermore, this information is limited to channels with wider than 250-500 m. The future Surface Water and Ocean Topography (SWOT) mission, which is intended to be launched in 2020, will provide global maps of water elevations, with a spatial resolution of 100 m and errors on the water elevation equal to or below 10 cm. The SWOT Ka band interferometric Synthetic Aperture Radar (SAR), will not be affected by cloud cover (aside from infrequent heavy rain); therefore, estimation of the water volume change on the Ganges and on the Brahmaputra upstream to the Bangladesh provided by SWOT should be much more accurate in space and time than can currently be achieved. We discuss the implications of future SWOT observations in the context of our preliminary work on the Ganges-Brahmaputra Rivers using current generation satellite data.

Recent advances in chirally pure proton pump inhibitors.

PubMed

Pai, Vikas; Pai, Nitin

2007-08-01

Chirality is a ubiquitous natural phenomenon resulting because of a differential spatial orientation of molecules around its chiral centre. This leads to the existence of two or more spatially dissimilar forms, known as stereoisomers or enantiomers, which are non-superimposable images of each other and may significantly differ from each other with respect to pharmacokinetic and pharmacodynamic properties and molecular interaction. Thus one isomer may offer significant pharmacokinetic and therapeutic advantages as compared to the other isomer or the racemic mixture (mixture containing both enantiomers). Proton pump inhibitors are a class of drugs which have been very effective in the management of acid-related disorders. The proton pumps currently available in the market including omeprazole, pantoprazole, rabeprazole and lansoprazole are racemic mixtures of the S and R isomers. Chirally pure forms of proton pump inhibitors show a superior metabolic and pharmacokinetic profile as compared to their racemates. The therapeutic efficacy is also superior to the parent racemate. This has been clearly demonstrated with the development of esomeprazole- the S-isomer of omeprazole. S-pantoprazole and dexrabeprazole also offer therapeutic advantages as compared to racemic pantoprazole and racemic rabeprazole respectively. This article reviews the chiral developments in the proton pump inhibitors and their clinical applications.

A spatial approach to environmental risk assessment of PAH contamination.

PubMed

Bengtsson, Göran; Törneman, Niklas

2009-01-01

The extent of remediation of contaminated industrial sites depends on spatial heterogeneity of contaminant concentration and spatially explicit risk characterization. We used sequential Gaussian simulation (SGS) and indicator kriging (IK) to describe the spatial distribution of polycyclic aromatic hydrocarbons (PAHs), pH, electric conductivity, particle aggregate distribution, water holding capacity, and total organic carbon, and quantitative relations among them, in a creosote polluted soil in southern Sweden. The geostatistical analyses were combined with risk analyses, in which the total toxic equivalent concentration of the PAH mixture was calculated from the soil concentrations of individual PAHs and compared with ecotoxicological effect concentrations and regulatory threshold values in block sizes of 1.8 x 1.8 m. Most PAHs were spatially autocorrelated and appeared in several hot spots. The risk calculated by SGS was more confined to specific hot spot areas than the risk calculated by IK, and 40-50% of the site had PAH concentrations exceeding the threshold values with a probability of 80% and higher. The toxic equivalent concentration of the PAH mixture was dependent on the spatial distribution of organic carbon, showing the importance of assessing risk by a combination of measurements of PAH and organic carbon concentrations. Essentially, the same risk distribution pattern was maintained when Monte Carlo simulations were used for implementation of risk in larger (5 x 5 m), economically more feasible remediation blocks, but a smaller area became of great concern for remediation when the simulations included PAH partitioning to two separate sources, creosote and natural, of organic matter, rather than one general.

Spatial working memory for locations specified by vision and audition: testing the amodality hypothesis.

PubMed

Loomis, Jack M; Klatzky, Roberta L; McHugh, Brendan; Giudice, Nicholas A

2012-08-01

Spatial working memory can maintain representations from vision, hearing, and touch, representations referred to here as spatial images. The present experiment addressed whether spatial images from vision and hearing that are simultaneously present within working memory retain modality-specific tags or are amodal. Observers were presented with short sequences of targets varying in angular direction, with the targets in a given sequence being all auditory, all visual, or a sequential mixture of the two. On two thirds of the trials, one of the locations was repeated, and observers had to respond as quickly as possible when detecting this repetition. Ancillary detection and localization tasks confirmed that the visual and auditory targets were perceptually comparable. Response latencies in the working memory task showed small but reliable costs in performance on trials involving a sequential mixture of auditory and visual targets, as compared with trials of pure vision or pure audition. These deficits were statistically reliable only for trials on which the modalities of the matching location switched from the penultimate to the final target in the sequence, indicating a switching cost. The switching cost for the pair in immediate succession means that the spatial images representing the target locations retain features of the visual or auditory representations from which they were derived. However, there was no reliable evidence of a performance cost for mixed modalities in the matching pair when the second of the two did not immediately follow the first, suggesting that more enduring spatial images in working memory may be amodal.

Blind source separation and localization using microphone arrays

NASA Astrophysics Data System (ADS)

Sun, Longji

The blind source separation and localization problem for audio signals is studied using microphone arrays. Pure delay mixtures of source signals typically encountered in outdoor environments are considered. Our proposed approach utilizes the subspace methods, including multiple signal classification (MUSIC) and estimation of signal parameters via rotational invariance techniques (ESPRIT) algorithms, to estimate the directions of arrival (DOAs) of the sources from the collected mixtures. Since audio signals are generally considered broadband, the DOA estimates at frequencies with the large sum of squared amplitude values are combined to obtain the final DOA estimates. Using the estimated DOAs, the corresponding mixing and demixing matrices are computed, and the source signals are recovered using the inverse short time Fourier transform. Subspace methods take advantage of the spatial covariance matrix of the collected mixtures to achieve robustness to noise. While the subspace methods have been studied for localizing radio frequency signals, audio signals have their special properties. For instance, they are nonstationary, naturally broadband and analog. All of these make the separation and localization for the audio signals more challenging. Moreover, our algorithm is essentially equivalent to the beamforming technique, which suppresses the signals in unwanted directions and only recovers the signals in the estimated DOAs. Several crucial issues related to our algorithm and their solutions have been discussed, including source number estimation, spatial aliasing, artifact filtering, different ways of mixture generation, and source coordinate estimation using multiple arrays. Additionally, comprehensive simulations and experiments have been conducted to examine various aspects of the algorithm. Unlike the existing blind source separation and localization methods, which are generally time consuming, our algorithm needs signal mixtures of only a short duration and therefore supports real-time implementation.

Thermochemically recuperated and steam cooled gas turbine system

DOEpatents

Viscovich, Paul W.; Bannister, Ronald L.

1995-01-01

A gas turbine system in which the expanded gas from the turbine section is used to generate the steam in a heat recovery steam generator and to heat a mixture of gaseous hydrocarbon fuel and the steam in a reformer. The reformer converts the hydrocarbon gas to hydrogen and carbon monoxide for combustion in a combustor. A portion of the steam from the heat recovery steam generator is used to cool components, such as the stationary vanes, in the turbine section, thereby superheating the steam. The superheated steam is mixed into the hydrocarbon gas upstream of the reformer, thereby eliminating the need to raise the temperature of the expanded gas discharged from the turbine section in order to achieve effective conversion of the hydrocarbon gas.

Satellite-derived submarine melt rates and mass balance (2011-2015) for Greenland's largest remaining ice tongues

NASA Astrophysics Data System (ADS)

Wilson, Nat; Straneo, Fiammetta; Heimbach, Patrick

2017-12-01

Ice-shelf-like floating extensions at the termini of Greenland glaciers are undergoing rapid changes with potential implications for the stability of upstream glaciers and the ice sheet as a whole. While submarine melting is recognized as a major contributor to mass loss, the spatial distribution of submarine melting and its contribution to the total mass balance of these floating extensions is incompletely known and understood. Here, we use high-resolution WorldView satellite imagery collected between 2011 and 2015 to infer the magnitude and spatial variability of melt rates under Greenland's largest remaining ice tongues - Nioghalvfjerdsbræ (79 North Glacier, 79N), Ryder Glacier (RG), and Petermann Glacier (PG). Submarine melt rates under the ice tongues vary considerably, exceeding 50 m a-1 near the grounding zone and decaying rapidly downstream. Channels, likely originating from upstream subglacial channels, give rise to large melt variations across the ice tongues. We compare the total melt rates to the influx of ice to the ice tongue to assess their contribution to the current mass balance. At Petermann Glacier and Ryder Glacier, we find that the combined submarine and aerial melt approximately balances the ice flux from the grounded ice sheet. At Nioghalvfjerdsbræ the total melt flux (14.2 ± 0.96 km3 a-1 w.e., water equivalent) exceeds the inflow of ice (10.2 ± 0.59 km3 a-1 w.e.), indicating present thinning of the ice tongue.

Sources, spatial variation, and speciation of heavy metals in sediments of the Tamagawa River in Central Japan.

PubMed

Shikazono, N; Tatewaki, K; Mohiuddin, K M; Nakano, T; Zakir, H M

2012-01-01

Sediments of the Tamagawa River in central Japan were studied to explain the spatial variation, to identify the sources of heavy metals, and to evaluate the anthropogenic influence on these pollutants in the river. Sediment samples were collected from 20 sites along the river (five upstream, four midstream, and 11 downstream). Heavy metal concentrations, viz. chromium, nickel, copper, zinc, lead, cadmium, and molybdenum, in the samples were measured using inductively coupled plasma-mass spectroscopy. The chemical speciations of heavy metals in the sediments were identified by the widely used five-step Hall method. Lead isotopes were analyzed to identify what portion is contributed by anthropogenic sources. The total heavy metal concentrations were compared with global averages for continental crust (shale) and average values for Japanese river sediments. The mean heavy metal concentrations were higher in downstream sediments than in upstream and midstream samples, and the concentrations in the silt samples were higher than those in the sand samples. Speciation results demonstrate that, for chromium and nickel, the residual fractions were dominant. These findings imply that the influence of anthropogenic chromium and nickel contamination is negligible, while copper, zinc, and lead were mostly extracted in the non-residual fraction (metals in adsorbed/exchangeable/carbonate forms or bound to amorphous Fe oxyhydroxides, crystalline Fe oxides, or organic matter), indicating that these elements have high chemical mobility. The proportion of lead (Pb) isotopes in the downstream silt samples indicates that Pb accumulation is primarily derived from anthropogenic sources.

[Soil Phosphorus Forms and Leaching Risk in a Typically Agricultural Catchment of Hefei Suburban].

PubMed

Fan, Hui-hui; Li, Ru-zhong; Pei, Ting-ting; Zhang, Rui-gang

2016-01-15

To investigate the soil phosphorus forms and leaching risk in a typically agricultural catchment of Ershibu River in Hefei Suburban, Chaohu Lake basin, 132 surface soil samples were collected from the catchment area. The spatial distribution of total phosphorus (TP) and bio-available phosphorus (Bio-P), and the spatial variability of soil available phosphorus (Olsen-P) and easy desorption phosphorus (CaCl2-P) were analyzed using the Kriging technology of AreGIS after speciation analysis of soil phosphorus. Moreover, the enrichment level of soil phosphorus was studied, and the phosphorus leaching risk was evaluated through determining the leaching threshold value of soil phosphorus. The results showed that the samples with high contents of TP and Bio-P mainly located in the upstream of the left tributary and on the right side of local area where two tributaries converged. The enrichment rates of soil phosphorus forms were arranged as follows: Ca-P (15.01) > OP (4.16) > TP (3. 42) > IP (2.94) > Ex-P (2.76) > Fe/Al-P (2.43) > Olsen-P (2.34). The critical value of Olsen-P leaching was 18.388 mg x kg(-1), and the leaching samples with values higher than the threshold value accounted for 16.6% of total samples. Generally, the high-risk areas mainly occurred in the upstream of the left tributary, the middle of the right tributary and the local area of the downstream of the area where two tributaries converged.

Predicting the distribution of bed material accumulation using river network sediment budgets

NASA Astrophysics Data System (ADS)

Wilkinson, Scott N.; Prosser, Ian P.; Hughes, Andrew O.

2006-10-01

Assessing the spatial distribution of bed material accumulation in river networks is important for determining the impacts of erosion on downstream channel form and habitat and for planning erosion and sediment management. A model that constructs spatially distributed budgets of bed material sediment is developed to predict the locations of accumulation following land use change. For each link in the river network, GIS algorithms are used to predict bed material supply from gullies, river banks, and upstream tributaries and to compare total supply with transport capacity. The model is tested in the 29,000 km2 Murrumbidgee River catchment in southeast Australia. It correctly predicts the presence or absence of accumulation in 71% of river links, which is significantly better performance than previous models, which do not account for spatial variability in sediment supply and transport capacity. Representing transient sediment storage is important for predicting smaller accumulations. Bed material accumulation is predicted in 25% of the river network, indicating its importance as an environmental problem in Australia.

Spatial and temporal variation of phytoplankton in a tropical eutrophic river.

PubMed

Santana, L M; Moraes, M E B; Silva, D M L; Ferragut, C

2016-04-19

This study aims to evaluate the environmental factors determining of the changes in phytoplankton structure in spatial (upper, middle and lower course) and seasonal (dry and rainy period) scales in a eutrophic river (Almada River, northeastern Brazil). In the study period, total accumulated rainfall was below of the historic average, resulting in flow reduction, mainly in rainy period. High orthophosphate concentration was found at the sampling sites. Phytoplankton chlorophyll a increased from upstream to downstream. Geitlerinema splendidum (S1) and Chlamydomonas sp. (X2) were the most abundant species in the upper course and several species of diatoms (D), Euglenophyceae (W1, W2) and Chlorophyceae (X1) in the middle and lower course. The functional groups were found to be characteristic of lotic ecosystem, shallow, with low light availability, rich in organic matter and eutrophic environments. We conclude that phytoplankton community structure was sensitive to change of the river flow and nutrient availability in spatial and seasonal scale in a tropical river.

Corresponding long-term shifts in stream temperature and invasive fish migration

USGS Publications Warehouse

McCann, Erin L.; Johnson, Nicholas; Pangle, Kevin

2018-01-01

By investigating historic trapping records of invasive sea lamprey (Petromyzon marinus) throughout tributaries to the Laurentian Great Lakes, we found that upstream spawning migration timing was highly correlated with stream temperatures over large spatial and temporal scales. Furthermore, several streams in our study exceeded a critical spring thermal threshold (i.e., 15°C) and experienced peak spawning migration up to 30 days earlier since the 1980s, whereas others were relatively unchanged. Streams exhibiting warming trends and earlier migration were spatially clustered and generally found on the leeward side of the Great Lakes where the lakes most affect local climate. These findings highlight that all streams are not equally impacted by climate change and represent, to our knowledge, the first observation linking long-term changes in stream temperatures to shifts in migration timing of an invasive fish. Earlier sea lamprey migration in Great Lakes tributaries may improve young of the year growth and survival, but not limit their spatial distribution, making sea lamprey control more challenging.

Using virtual 3-D plant architecture to assess fungal pathogen splash dispersal in heterogeneous canopies: a case study with cultivar mixtures and a non-specialized disease causal agent.

PubMed

Gigot, C; de Vallavieille-Pope, C; Huber, L; Saint-Jean, S

2014-09-01

Recent developments in plant disease management have led to a growing interest in alternative strategies, such as increasing host diversity and decreasing the use of pesticides. Use of cultivar mixtures is one option, allowing the spread of plant epidemics to be slowed down. As dispersal of fungal foliar pathogens over short distances by rain-splash droplets is a major contibutor to the spread of disease, this study focused on modelling the physical mechanisms involved in dispersal of a non-specialized pathogen within heterogeneous canopies of cultivar mixtures, with the aim of optimizing host diversification at the intra-field level. Virtual 3-D wheat-like plants (Triticum aestivum) were used to consider interactions between plant architecture and disease progression in heterogeneous canopies. A combined mechanistic and stochastic model, taking into account splash droplet dispersal and host quantitative resistance within a 3-D heterogeneous canopy, was developed. It consists of four sub-models that describe the spatial patterns of two cultivars within a complex canopy, the pathway of rain-splash droplets within this canopy, the proportion of leaf surface area impacted by dispersal via the droplets and the progression of disease severity after each dispersal event. Different spatial organization, proportions and resistance levels of the cultivars of two-component mixtures were investigated. For the eight spatial patterns tested, the protective effect against disease was found to vary by almost 2-fold, with the greatest effect being obtained with the smallest genotype unit area, i.e. the ground area occupied by an independent unit of the host population that is genetically homogeneous. Increasing both the difference between resistance levels and the proportion of the most resistant cultivar often resulted in a greater protective effect; however, this was not observed for situations in which the most resistant of the two cultivars in the mixture had a relatively low level of resistance. The results show agreement with previous data obtained using experimental approaches. They demonstrate that in order to maximize the potential mixture efficiency against a splash-dispersed pathogen, optimal susceptible/resistant cultivar proportions (ranging from 1/9 to 5/5) have to be established based on host resistance levels. The results also show that taking into account dispersal processes in explicit 3-D plant canopies can be a key tool for investigating disease progression in heterogeneous canopies such as cultivar mixtures. © The Author 2014. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Spatial resolution of the electrical conductance of ionic fluids using a Green-Kubo method.

PubMed

Jones, R E; Ward, D K; Templeton, J A

2014-11-14

We present a Green-Kubo method to spatially resolve transport coefficients in compositionally heterogeneous mixtures. We develop the underlying theory based on well-known results from mixture theory, Irving-Kirkwood field estimation, and linear response theory. Then, using standard molecular dynamics techniques, we apply the methodology to representative systems. With a homogeneous salt water system, where the expectation of the distribution of conductivity is clear, we demonstrate the sensitivities of the method to system size, and other physical and algorithmic parameters. Then we present a simple model of an electrochemical double layer where we explore the resolution limit of the method. In this system, we observe significant anisotropy in the wall-normal vs. transverse ionic conductances, as well as near wall effects. Finally, we discuss extensions and applications to more realistic systems such as batteries where detailed understanding of the transport properties in the vicinity of the electrodes is of technological importance.

Spatiotemporal multivariate mixture models for Bayesian model selection in disease mapping.

PubMed

Lawson, A B; Carroll, R; Faes, C; Kirby, R S; Aregay, M; Watjou, K

2017-12-01

It is often the case that researchers wish to simultaneously explore the behavior of and estimate overall risk for multiple, related diseases with varying rarity while accounting for potential spatial and/or temporal correlation. In this paper, we propose a flexible class of multivariate spatio-temporal mixture models to fill this role. Further, these models offer flexibility with the potential for model selection as well as the ability to accommodate lifestyle, socio-economic, and physical environmental variables with spatial, temporal, or both structures. Here, we explore the capability of this approach via a large scale simulation study and examine a motivating data example involving three cancers in South Carolina. The results which are focused on four model variants suggest that all models possess the ability to recover simulation ground truth and display improved model fit over two baseline Knorr-Held spatio-temporal interaction model variants in a real data application.

Spatially explicit dynamic N-mixture models

USGS Publications Warehouse

Zhao, Qing; Royle, Andy; Boomer, G. Scott

2017-01-01

Knowledge of demographic parameters such as survival, reproduction, emigration, and immigration is essential to understand metapopulation dynamics. Traditionally the estimation of these demographic parameters requires intensive data from marked animals. The development of dynamic N-mixture models makes it possible to estimate demographic parameters from count data of unmarked animals, but the original dynamic N-mixture model does not distinguish emigration and immigration from survival and reproduction, limiting its ability to explain important metapopulation processes such as movement among local populations. In this study we developed a spatially explicit dynamic N-mixture model that estimates survival, reproduction, emigration, local population size, and detection probability from count data under the assumption that movement only occurs among adjacent habitat patches. Simulation studies showed that the inference of our model depends on detection probability, local population size, and the implementation of robust sampling design. Our model provides reliable estimates of survival, reproduction, and emigration when detection probability is high, regardless of local population size or the type of sampling design. When detection probability is low, however, our model only provides reliable estimates of survival, reproduction, and emigration when local population size is moderate to high and robust sampling design is used. A sensitivity analysis showed that our model is robust against the violation of the assumption that movement only occurs among adjacent habitat patches, suggesting wide applications of this model. Our model can be used to improve our understanding of metapopulation dynamics based on count data that are relatively easy to collect in many systems.

Spatial Analysis of Large Woody Debris Arrangement in a Midwestern U.S. River System: Geomorphic Implications and Influences

NASA Astrophysics Data System (ADS)

Martin, D. J.

2013-12-01

Large woody debris (LWD) is universally recognized as a key component of the geomorphological and ecological function of fluvial systems and has been increasingly incorporated into stream restoration and watershed management projects. However, 'natural' processes of recruitment and the subsequent arrangement of LWD within the river network are poorly understood and are thus, rarely a management consideration. Additionally, LWD research tends to be regionally biased toward mountainous regions, and scale biased toward the micro-scale. In many locations, the lack of understanding has led to the failure of restoration/rehabilitation projects that involved the use of LWD. This research uses geographic information systems and spatial analysis techniques to investigate longitudinal arrangement patterns of LWD in a low-gradient, Midwestern river. A large-scale GPS inventory of LWD was performed on the Big River, located in the eastern Missouri Ozarks resulting in over 5,000 logged positions of LWD along seven river segments covering nearly 100 km of the 237 km river system. A time series analysis framework was used to statistically identify longitudinal spatial patterns of LWD arrangement along the main stem of the river, and correlation analyses were performed to help identify physical controls of those patterns. Results indicate that upstream segments have slightly lower densities than downstream segments, with the exception of the farthest upstream segment. Results also show lack of an overall longitudinal trend in LWD density; however, periodogram analysis revealed an inherent periodicity in LWD arrangement. Periodicities were most evident in the downstream segments with frequencies ranging from 3 km to 7 km. Additionally, Pearson correlation analysis, performed within the segment displaying the strongest periodic behavior, show that LWD densities are correlated with channel sinuosity (r=0.25). Ongoing research is investigating further relationships between arrangement patterns and geomorphic and riparian variables. Understanding these spatial patterns and relationships will provide valuable insight into the application of LWD-related stream and watershed management practices, and fill a necessary regional knowledge gap in our understanding of LWD's role in fluvial processes.

Leads Detection Using Mixture Statistical Distribution Based CRF Algorithm from Sentinel-1 Dual Polarization SAR Imagery

NASA Astrophysics Data System (ADS)

Zhang, Yu; Li, Fei; Zhang, Shengkai; Zhu, Tingting

2017-04-01

Synthetic Aperture Radar (SAR) is significantly important for polar remote sensing since it can provide continuous observations in all days and all weather. SAR can be used for extracting the surface roughness information characterized by the variance of dielectric properties and different polarization channels, which make it possible to observe different ice types and surface structure for deformation analysis. In November, 2016, Chinese National Antarctic Research Expedition (CHINARE) 33rd cruise has set sails in sea ice zone in Antarctic. Accurate leads spatial distribution in sea ice zone for routine planning of ship navigation is essential. In this study, the semantic relationship between leads and sea ice categories has been described by the Conditional Random Fields (CRF) model, and leads characteristics have been modeled by statistical distributions in SAR imagery. In the proposed algorithm, a mixture statistical distribution based CRF is developed by considering the contexture information and the statistical characteristics of sea ice for improving leads detection in Sentinel-1A dual polarization SAR imagery. The unary potential and pairwise potential in CRF model is constructed by integrating the posteriori probability estimated from statistical distributions. For mixture statistical distribution parameter estimation, Method of Logarithmic Cumulants (MoLC) is exploited for single statistical distribution parameters estimation. The iteration based Expectation Maximal (EM) algorithm is investigated to calculate the parameters in mixture statistical distribution based CRF model. In the posteriori probability inference, graph-cut energy minimization method is adopted in the initial leads detection. The post-processing procedures including aspect ratio constrain and spatial smoothing approaches are utilized to improve the visual result. The proposed method is validated on Sentinel-1A SAR C-band Extra Wide Swath (EW) Ground Range Detected (GRD) imagery with a pixel spacing of 40 meters near Prydz Bay area, East Antarctica. Main work is listed as follows: 1) A mixture statistical distribution based CRF algorithm has been developed for leads detection from Sentinel-1A dual polarization images. 2) The assessment of the proposed mixture statistical distribution based CRF method and single distribution based CRF algorithm has been presented. 3) The preferable parameters sets including statistical distributions, the aspect ratio threshold and spatial smoothing window size have been provided. In the future, the proposed algorithm will be developed for the operational Sentinel series data sets processing due to its less time consuming cost and high accuracy in leads detection.

Jet Mixing in a Reacting Cylindrical Crossflow

NASA Technical Reports Server (NTRS)

Leong, M. Y.; Samuelsen, G. S.; Holdeman, J. D.

1995-01-01

This paper addresses the mixing of air jets into the hot, fuel-rich products of a gas turbine primary zone. The mixing, as a result, occurs in a reacting environment with chemical conversion and substantial heat release. The geometry is a crossflow confined in a cylindrical duct with side-wall injection of jets issuing from round orifices. A specially designed reactor, operating on propane, presents a uniform mixture without swirl to mixing modules consisting of 8, 9, 10, and 12 holes at a momentum-flux ratio of 57 and a jet-to-mainstream mass-flow ratio of 2.5. Concentrations of O2, CO2, CO, and HC are obtained upstream, downstream, and within the orifice plane. O2 profiles indicate jet penetration while CO2, CO, and HC profiles depict the extent of reaction. Jet penetration is observed to be a function of the number of orifices and is found to affect the mixing in the reacting system. The results demonstrate that one module (the 12-hole) produces near-optimal penetration defined here as a jet penetration closest to the module half-radius, and hence the best uniform mixture at a plane one duct radius from the orifice leading edge.

DSMC Shock Simulation of Saturn Entry Probe Conditions

NASA Technical Reports Server (NTRS)

Higdon, Kyle J.; Cruden, Brett A.; Brandis, Aaron; Liechty, Derek S.; Goldstein, David B.; Varghese, Philip L.

2016-01-01

This work describes the direct simulation Monte Carlo (DSMC) investigation of Saturn entry probe scenarios and the influence of non-equilibrium phenomena on Saturn entry conditions. The DSMC simulations coincide with rarefied hypersonic shock tube experiments of a hydrogen-helium mixture performed in the Electric Arc Shock Tube (EAST) at NASA Ames Research Center. The DSMC simulations are post-processed through the NEQAIR line-by-line radiation code to compare directly to the experimental results. Improved collision cross-sections, inelastic collision parameters, and reaction rates are determined for a high temperature DSMC simulation of a 7-species H2-He mixture and an electronic excitation model is implemented in the DSMC code. Simulation results for 27.8 and 27.4 kms shock waves are obtained at 0.2 and 0.1 Torr respectively and compared to measured spectra in the VUV, UV, visible, and IR ranges. These results confirm the persistence of non-equilibrium for several centimeters behind the shock and the diffusion of atomic hydrogen upstream of the shock wave. Although the magnitude of the radiance did not match experiments and an ionization inductance period was not observed in the simulations, the discrepancies indicated where improvements are needed in the DSMC and NEQAIR models.

DSMC Shock Simulation of Saturn Entry Probe Conditions

NASA Technical Reports Server (NTRS)

Higdon, Kyle J.; Cruden, Brett A.; Brandis, Aaron M.; Liechty, Derek S.; Goldstein, David B.; Varghese, Philip L.

2016-01-01

This work describes the direct simulation Monte Carlo (DSMC) investigation of Saturn entry probe scenarios and the influence of non-equilibrium phenomena on Saturn entry conditions. The DSMC simulations coincide with rarefied hypersonic shock tube experiments of a hydrogen-helium mixture performed in the Electric Arc Shock Tube (EAST) at the NASA Ames Research Center. The DSMC simulations are post-processed through the NEQAIR line-by-line radiation code to compare directly to the experimental results. Improved collision cross-sections, inelastic collision parameters, and reaction rates are determined for a high temperature DSMC simulation of a 7-species H2-He mixture and an electronic excitation model is implemented in the DSMC code. Simulation results for 27.8 and 27.4 km/s shock waves are obtained at 0.2 and 0.1 Torr, respectively, and compared to measured spectra in the VUV, UV, visible, and IR ranges. These results confirm the persistence of non-equilibrium for several centimeters behind the shock and the diffusion of atomic hydrogen upstream of the shock wave. Although the magnitude of the radiance did not match experiments and an ionization inductance period was not observed in the simulations, the discrepancies indicated where improvements are needed in the DSMC and NEQAIR models.

A constitutive theory of reacting electrolyte mixtures

NASA Astrophysics Data System (ADS)

Costa Reis, Martina; Wang, Yongqi; Bono Maurizio Sacchi Bassi, Adalberto

2013-11-01

A constitutive theory of reacting electrolyte mixtures is formulated. The intermolecular interactions among the constituents of the mixture are accounted for through additional freedom degrees to each constituent of the mixture. Balance equations for polar reacting continuum mixtures are accordingly formulated and a proper set of constitutive equations is derived with basis in the Müller-Liu formulation of the second law of thermodynamics. Moreover, the non-equilibrium and equilibrium responses of the reacting mixture are investigated in detail by emphasizing the inner and reactive structures of the medium. From the balance laws and constitutive relations, the effects of molecular structure of constituents upon the fluid flow are studied. It is also demonstrated that the local thermodynamic equilibrium state can be reached without imposing that the set of independent constitutive variables is time independent, neither spatially homogeneous nor null. The resulting constitutive relations presented throughout this work are of relevance to many practical applications, such as swelling of clays, developing of bio and polymeric membranes, and use of electrorheological fluids in industrial processes. The first author acknowledges financial support from National Counsel of Technological and Scientific Development (CNPq) and German Academic Exchange Service (DAAD).

Condition of larval and early juvenile Japanese temperate bass Lateolabrax japonicus related to spatial distribution and feeding in the Chikugo estuarine nursery ground in the Ariake Bay, Japan

NASA Astrophysics Data System (ADS)

Islam, Md. Shahidul; Hibino, Manabu; Nakayama, Kouji; Tanaka, Masaru

2006-02-01

The present study investigates feeding and condition of larval and juvenile Japanese temperate bass Lateolabrax japonicus in relation to spatial distribution in the Chikugo estuary (Japan). Larvae were collected in a wide area covering the nursery grounds of the species in 2002 and 2003. Food habits of the fish were analysed by examining their gut contents. Fish condition was evaluated by using morphometric (the length-weight relationship and condition factor) and biochemical (the RNA:DNA ratio and other nucleic acid based parameters) indices and growth rates. The nucleic-acid contents in individually frozen larvae and juveniles were quantified by standard fluorometric methods. Two distinct feeding patterns, determined by the distribution of prey copepods, were identified. The first pattern showed dependence on the calanoid copepod Sinocalanus sinensis, which was the single dominant prey in low-saline upper river areas. The second pattern involved a multi-specific dietary habit mainly dominated by Acartia omorii, Oithona davisae, and Paracalanus parvus. As in the gut contents analyses, two different sets of values were observed for RNA, DNA, total protein, growth rates and for all the nucleic acid-based indices: one for the high-saline downstream areas and a second for the low-saline upstream areas, which was significantly higher than the first. The proportion of starving fish was lower upstream than downstream. Values of the allometric coefficient ( b) and the condition factor ( K) obtained from the length-weight relationships increased gradually from the sea to the upper river. Clearly, fish in the upper river had a better condition than those in the lower estuary. RNA:DNA ratios correlated positively with temperature and negatively with salinity. We hypothesise that by migration to the better foraging grounds of the upper estuary (with higher prey biomass, elevated temperature and reduced salinity), the fish reduce early mortality and attain a better condition. We conclude that utilisation of the copepod S. sinensis in the upstream nursery grounds is one of the key early survival strategies in Japanese temperate bass in the Chikugo estuary.

Expression for time travel based on diffusive wave theory: applicability and considerations

NASA Astrophysics Data System (ADS)

Aguilera, J. C.; Escauriaza, C. R.; Passalacqua, P.; Gironas, J. A.

2017-12-01

Prediction of hydrological response is of utmost importance when dealing with urban planning, risk assessment, or water resources management issues. With the advent of climate change, special care must be taken with respect to variations in rainfall and runoff due to rising temperature averages. Nowadays, while typical workstations have adequate power to run distributed routing hydrological models, it is still not enough for modeling on-the-fly, a crucial ability in a natural disaster context, where rapid decisions must be made. Semi-distributed time travel models, which compute a watershed's hydrograph without explicitly solving the full shallow water equations, appear as an attractive approach to rainfall-runoff modeling since, like fully distributed models, also superimpose a grid on the watershed, and compute runoff based on cell parameter values. These models are heavily dependent on the travel time expression for an individual cell. Many models make use of expressions based on kinematic wave theory, which is not applicable in cases where watershed storage is important, such as mild slopes. This work presents a new expression for concentration times in overland flow, based on diffusive wave theory, which considers not only the effects of storage but also the effects on upstream contribution. Setting upstream contribution equal to zero gives an expression consistent with previous work on diffusive wave theory; on the other hand, neglecting storage effects (i.e.: diffusion,) is shown to be equivalent to kinematic wave theory, currently used in many spatially distributed time travel models. The newly found expression is shown to be dependent on plane discretization, particularly when dealing with very non-kinematic cases. This is shown to be the result of upstream contribution, which gets larger downstream, versus plane length. This result also provides some light on the limits on applicability of the expression: when a certain kinematic threshold is reached, the expression is no longer valid, and one must fall back to kinematic wave theory, for lack of a better option. This expression could be used for improving currently published spatially distributed time travel models, since they would become applicable in many new cases.

Mercury and Methylmercury Related to Historical Mercury Mining in Three Major Tributaries to Lake Berryessa, Upper Putah Creek Watershed, California

NASA Astrophysics Data System (ADS)

Sparks, G. C.; Alpers, C. N.; Horner, T. C.; Cornwell, K.; Izzo, V.

2016-12-01

The relative contributions of total mercury (THg) and methylmercury (MeHg) from upstream historical mercury (Hg) mining districts were examined in the three largest tributaries to Lake Berryessa, a reservoir with water quality impaired by Hg. A fish consumption advisory has been issued for the reservoir; also, in a study of piscivorous birds at 25 California reservoirs, blood samples from Lake Berryessa grebes had the highest THg concentration state-wide. The third and fourth largest historical Hg-producing mining districts in California are within the study area. These mining districts are located within the Pope Creek, Upper Putah Creek, and Knoxville-Eticuera Creeks watersheds. Downstream of the reservoir, Lower Putah Creek drains into the Yolo Bypass, a major source of THg and MeHg to the Sacramento-San Joaquin Delta. Study objectives included: (1) determining if tributaries downstream of historical Hg mining districts and draining to the reservoir are continuing sources of THg and MeHg; (2) characterizing variability of water and streambed sediment parameters in upstream and downstream reaches of each creek; and (3) estimating loads of suspended sediment, THg, and MeHg entering the reservoir from each tributary. Water samples were collected from October 2012 to September 2014 during non-storm and storm events along each tributary and analyzed for general water quality field parameters; unfiltered THg and MeHg; total suspended solids; and total particulate matter. Discharge measurements were made at the time of sample collection; flow and concentration data were combined to compute daily loads. To determine spatial variability, 135 streambed sediment samples were analyzed for THg, organic content (loss on ignition), and grain-size distribution. All three tributaries contribute THg and MeHg to the reservoir. Some consistent spatial trends in THg (water) concentrations were observed over multiple sampling events; THg (water) decreased from upstream to downstream in all three tributaries. Tributary reaches with elevated THg in streambed sediment ("Hg hot spots") are near or downstream from historical Hg mines and Hg-enriched ore deposits. Future Hg load and cycling studies are needed to identify practical remediation approaches for decreasing THg and MeHg loads to Lake Berryessa.

Nitrogen dynamics in a tidal river zone influenced by highly urbanization, western Japan

NASA Astrophysics Data System (ADS)

Saito, M.; Onodera, S. I.; Shimizu, Y.; Maruyama, Y.; Jin, G.; Aritomi, D.

2014-12-01

Tidal river and estuary are the transition zone between freshwater and seawater with high biological production. These areas have characteristics of water level fluctuation which causes surface water-groundwater interaction and the associated change in dynamics of nitrogen. Generally in coastal megacities, severe groundwater depression and high contaminants load influence on the environment of tidal river. However, these effects on the nitrogen dynamics and its load from a river to sea have not been fully evaluated in previous studies. Therefore, we aimed to clarify the characteristics of the nitrogen dynamics with the surface water-groundwater interaction in the tidal river zone of Osaka metropolitan city, western Japan. We conducted the field survey from the river mouth to the 7km upstream area of Yamato River, which has a length of 68km and a watershed area of 1,070 km2. Spatial variations in radon (222Rn) concentrations and the difference of hydraulic potential between river waters and the pore waters suggest that the groundwater discharges to the river channel in the upstream area. In contrast, the river water recharged into the groundwater near the river mouth area. It may be caused by the lowering of groundwater level associated with the excess abstraction in the urban area. The spatial and temporal variations in nutrient concentration indicate that nitrate-nitrogen (NO3-N) concentration changed temporally and it was negatively correlated with dissolved organic nitrogen (DON) concentration. Based on the mass balance estimation in winter and summer periods, nitrogen was removed in tidal river zone in both periods which was estimated to be about 10 % of total nitrogen (TN) load from the upstream. However, dissolved inorganic nitrogen (DIN) and DON was re-produced in winter and summer periods, respectively. NO3-N concentrations were negatively correlated with velocity of river water, which suggests the progress of denitrification in the tidal river zone under low discharge condition. Nitrogen and oxygen stable isotope ratios (δ15N, δ18O) of nitrate (NO3-) suggests the possibility of nitrification progress in the winter periods.

Seed harvesting by a generalist consumer is context-dependent: Interactive effects across multiple spatial scales

USGS Publications Warehouse

Ostoja, Steven M.; Schupp, Eugene W.; Klinger, Rob

2013-01-01

Granivore foraging decisions affect consumer success and determine the quantity and spatial pattern of seed survival. These decisions are influenced by environmental variation at spatial scales ranging from landscapes to local foraging patches. In a field experiment, the effects of seed patch variation across three spatial scales on seed removal by western harvester ants Pogonomyrmex occidentalis were evaluated. At the largest scale we assessed harvesting in different plant communities, at the intermediate scale we assessed harvesting at different distances from ant mounds, and at the smallest scale we assessed the effects of interactions among seed species in local seed neighborhoods on seed harvesting (i.e. resource–consumer interface). Selected seed species were presented alone (monospecific treatment) and in mixture with Bromus tectorum (cheatgrass; mixture treatment) at four distances from P. occidentalis mounds in adjacent intact sagebrush and non-native cheatgrass-dominated communities in the Great Basin, Utah, USA. Seed species differed in harvest, with B. tectorum being least preferred. Large and intermediate scale variation influenced harvest. More seeds were harvested in sagebrush than in cheatgrass-dominated communities (largest scale), and the quantity of seed harvested varied with distance from mounds (intermediate-scale), although the form of the distance effect differed between plant communities. At the smallest scale, seed neighborhood affected harvest, but the patterns differed among seed species considered. Ants harvested fewer seeds from mixed-seed neighborhoods than from monospecific neighborhoods, suggesting context dependence and potential associational resistance. Further, the effects of plant community and distance from mound on seed harvest in mixtures differed from their effects in monospecific treatments. Beyond the local seed neighborhood, selection of seed resources is better understood by simultaneously evaluating removal at multiple scales. Associational effects provide a useful theoretical basis for better understanding harvester ant foraging decisions. These results demonstrate the importance of ecological context for seed removal, which has implications for seed pools, plant populations and communities.

Acoustics-turbulence interaction

NASA Technical Reports Server (NTRS)

Hussain, A. K. M. F.; Zaman, K. B. M. O.

1977-01-01

An investigation of the instability frequency was undertaken. Measurements revealed that the hot wire probe induces and sustains stable upstream oscillation of the free shear layer. The characteristics of the free shear layer tone are found to be different from the slit jet wedge edgetone phenomenon. The shear tone induced by a plane wedge in a plane free shear layer was then examined in order to further document the phenomenon. The eigenvalues and eigenfunctions of the tone fundamental show agreement with the spatial stability theory. A comprehensive summary of the results is also included.

Whole-Volume Clustering of Time Series Data from Zebrafish Brain Calcium Images via Mixture Modeling.

PubMed

Nguyen, Hien D; Ullmann, Jeremy F P; McLachlan, Geoffrey J; Voleti, Venkatakaushik; Li, Wenze; Hillman, Elizabeth M C; Reutens, David C; Janke, Andrew L

2018-02-01

Calcium is a ubiquitous messenger in neural signaling events. An increasing number of techniques are enabling visualization of neurological activity in animal models via luminescent proteins that bind to calcium ions. These techniques generate large volumes of spatially correlated time series. A model-based functional data analysis methodology via Gaussian mixtures is suggested for the clustering of data from such visualizations is proposed. The methodology is theoretically justified and a computationally efficient approach to estimation is suggested. An example analysis of a zebrafish imaging experiment is presented.

Electron transport in solid targets and in the active mixture of a CO2 laser amplifier

NASA Astrophysics Data System (ADS)

Galkowski, A.

The paper examines the use of the NIKE code for the Monte Carlo computation of the deposited energy profile and other characteristics of the absorption process of an electron beam in a solid target and the spatial distribution of primary ionization in the active mixture of a CO2 laser amplifier. The problem is considered in connection with the generation of intense electron beams and the acceleration of thin metal foils, as well as in connection with the electric discharge pumping of a CO2 laser amplifier.

Resistance and resilience of microbial communities--temporal and spatial insurance against perturbations.

PubMed

Baho, Didier L; Peter, Hannes; Tranvik, Lars J

2012-09-01

Bacteria play fundamental roles for many ecosystem processes; however, little empirical evidence is available on how environmental perturbations affect their composition and function. We investigated how spatial and temporal refuges affect the resistance and resilience of a freshwater bacterioplankton community upon a salinity pulse perturbation in continuous cultures. Attachment to a surface avoided the flushing out of cells and enabled re-colonization of the liquid phase after the perturbation, hence serving as a temporal refuge. A spatial refuge was established by introduction of bacteria from an undisturbed reservoir upstream of the continuous culture vessel, acting analogous to a regional species pool in a metacommunity. The salinity pulse affected bacterial community composition and the rates of respiration and the pattern of potential substrate utilization as well as the correlation between composition and function. Compared with the no-refuge treatment, the temporal refuge shortened return to pre-perturbation conditions, indicating enhanced community resilience. Composition and function were less disturbed in the treatment providing a spatial refuge, suggesting higher resistance. Our results highlight that spatial and temporal dynamics in general and refuges in particular need to be considered for conceptual progress in how microbial metacommunities are shaped by perturbations. © 2012 Society for Applied Microbiology and Blackwell Publishing Ltd.

Graffiti for science - erosion painting reveals spatially variable erosivity of sediment-laden flows

NASA Astrophysics Data System (ADS)

Beer, Alexander R.; Kirchner, James W.; Turowski, Jens M.

2016-12-01

Spatially distributed detection of bedrock erosion is a long-standing challenge. Here we show how the spatial distribution of surface erosion can be visualized and analysed by observing the erosion of paint from natural bedrock surfaces. If the paint is evenly applied, it creates a surface with relatively uniform erodibility, such that spatial variability in the erosion of the paint reflects variations in the erosivity of the flow and its entrained sediment. In a proof-of-concept study, this approach provided direct visual verification that sediment impacts were focused on upstream-facing surfaces in a natural bedrock gorge. Further, erosion painting demonstrated strong cross-stream variations in bedrock erosion, even in the relatively narrow (5 m wide) gorge that we studied. The left side of the gorge experienced high sediment throughput with abundant lateral erosion on the painted wall up to 80 cm above the bed, but the right side of the gorge only showed a narrow erosion band 15-40 cm above the bed, likely due to deposited sediment shielding the lower part of the wall. This erosion pattern therefore reveals spatial stream bed aggradation that occurs during flood events in this channel. The erosion painting method provides a simple technique for mapping sediment impact intensities and qualitatively observing spatially distributed erosion in bedrock stream reaches. It can potentially find wide application in both laboratory and field studies.

Formation of Cyclic Steps due to the Surge-type Turbidity Currents in a Flume Experiment

NASA Astrophysics Data System (ADS)

Yokokawa, M.

2016-12-01

Supercritical turbidity currents often form crescentic step-like wavy structures, which have been found at the submarine canyons, and deltaic environments. Field observations of turbidity currents and seabed topography on the Squamish delta in British Columbia, Canada revealed that cyclic steps formed by the surge-type turbidity currents (e.g., Hughes Clarke et al., 2012a; 2012b; 2014). The high-density portion of the flow, which affects the sea floor morphology, lasted only 30-60 seconds. The questions arise if we can reconstruct paleo-flow condition from the morphologic features of these steps. We don't know answers right now because there have been no experiments about the formative conditions of cyclic steps due to the "surge-type" turbidity currents. Here we did preliminary experiments on the formation of cyclic steps due to the multiple surge-type density currents, and compare the morphology of the steps with those of Squamish delta. First of all, we measured wave length and wave height of each step from profiles of each channels of Squamish delta from the elevation data and calculated the wave steepness. Wave steepness of active steps ranges about 0.05 to 0.15, which is relatively larger compare with those of other sediment waves. And in general, wave steepness is larger in the proximal region. The experiments had been performed at Osaka Institute of Technology. A flume, which is 7.0 m long, 0.3 m deep and 2 cm wide, was suspended in a larger tank, which is 7.6 m long, 1.2 m deep and 0.3 m wide, filled with water. The inner flume tilted at 7 degrees. Mixture of salt water (1.17 g/cm3) and plastic particles (1.5 g/cm3, 0.1-0.18 mm in diameter), whose weight ratio is 10:1, poured into the upstream end of the inner flume from head tank for 5 seconds. Discharge of the mixture was 240mL/s, thus for 5seconds 1200mL of mixture was released into the inner flume. We made 130 surges. As a result, four steps were formed ultimately, which were moving toward upstream direction. Wave steepness of the steps increases as number of runs increases, and reached to close to the value of Squamish. We did the other experiment for the continuous turbidity current. The conditions of the experiment were same as those of surge-type experiment except the duration of the run, which was 990 seconds, but it did not form cyclic steps.

Connections between meteorological and hydrological droughts in a semi-arid basin of the middle Yellow River

NASA Astrophysics Data System (ADS)

Li, Binquan; Zhu, Changchang; Liang, Zhongmin; Wang, Guoqing; Zhang, Yu

2018-06-01

Differences between meteorological and hydrological droughts could reflect the regional water consumption by both natural elements and human water-use. The connections between these two drought types were analyzed using the Standardized Precipitation Evapotranspiration Index (SPEI) and Standardized Streamflow Index (SSI), respectively. In a typical semi-arid basin of the middle Yellow River (Qingjianhe River basin), annual precipitation and air temperature showed significantly downward and upward trends, respectively, with the rates of -2.37 mm yr-1 and 0.03 °C yr-1 (1961-2007). Under their synthetic effects, water balance variable (represented by SPEI) showed obviously downward (drying) trend at both upstream and whole basin areas. For the spatial variability of precipitation, air temperature and the calculated SPEI, both upstream and downstream areas experienced very similar change characteristics. Results also suggested that the Qingjianhe River basin experienced near normal condition during the study period. As a whole, this semi-arid basin mainly had the meteorological drought episodes in the mid-1960s, late-1990s and the 2000s depicted by 12-month SPEI. The drying trend could also be depicted by the hydrological drought index (12-month SSI) at both upstream and downstream stations (Zichang and Yanchuan), but the decreasing trends were not significant. A correlation analysis showed that hydrological system responds rapidly to the change of meteorological conditions in this semi-arid region. This finding could be an useful implication to drought research for those semi-arid basins with intensive human activities.

ULF waves and plasma stability in different regions of the magnetosheath

NASA Astrophysics Data System (ADS)

Soucek, Jan; Escoubet, C. Philippe; Grison, Benjamin

2016-04-01

We present a statistical study of the occurrence and properties of ultra low frequency waves in the magnetosheath and interpret the results in terms of the competition of mirror and Alfvén-ion-cyclotron (AIC) instabilities. Both mirror and AIC waves are generated in high beta plasma of the magnetosheath when ion temperature anisotropy exceeds the threshold of the respective instabilities. These waves are frequently observed in the terrestrial and planetary magnetosheaths, but their distribution within the magnetosheath is inhomogeneous and their character varies as a function of location, local and upstream plasma parameters. We studied the spatial distribution of the two wave modes in the magnetosheath together with the local plasma parameters important for the stability of ULF waves. This analysis was performed on a dataset of all magnetosheath crossings observed by Cluster spacecraft over two years. For each observation we used bow shock, magnetopause and magnetosheath flow models to identify the relative position of the spacecraft with respect to magnetosheath boundaries and local properties of the upstream shock crossing. A strong dependence of parameters characterizing plasma stability and mirror/AIC wave occurrence on upstream ΘBn and MA is identified. The occurrence of mirror and AIC modes was compared against the respective instability thresholds and it was observed that AIC waves occurred nearly exclusively under mirror stable conditions. This is interpreted in terms of the different character of non-linear saturation of the two modes.

Analysis of C. elegans VIG-1 expression.

PubMed

Shin, Kyoung-Hwa; Choi, Boram; Park, Yang-Seo; Cho, Nam Jeong

2008-12-31

Double-stranded RNA (dsRNA) induces gene silencing in a sequence-specific manner by a process known as RNA interference (RNAi). The RNA-induced silencing complex (RISC) is a multi-subunit ribonucleoprotein complex that plays a key role in RNAi. VIG (Vasa intronic gene) has been identified as a component of Drosophila RISC; however, the role VIG plays in regulating RNAi is poorly understood. Here, we examined the spatial and temporal expression patterns of VIG-1, the C. elegans ortholog of Drosophila VIG, using a vig-1::gfp fusion construct. This construct contains the 908-bp region immediately upstream of vig-1 gene translation initiation site. Analysis by confocal microscopy demonstrated GFP-VIG-1 expression in a number of tissues including the pharynx, body wall muscle, hypodermis, intestine, reproductive system, and nervous system at the larval and adult stages. Furthermore, western blot analysis showed that VIG-1 is present in each developmental stage examined. To investigate regulatory sequences for vig-1 gene expression, we generated constructs containing deletions in the upstream region. It was determined that the GFP expression pattern of a deletion construct (delta-908 to -597) was generally similar to that of the non-deletion construct. In contrast, removal of a larger segment (delta-908 to -191) resulted in the loss of GFP expression in most cell types. Collectively, these results indicate that the 406-bp upstream region (-596 to -191) contains essential regulatory sequences required for VIG-1 expression.

Temporal variation and regional transfer of heavy metals in the Pearl (Zhujiang) River, China.

PubMed

Zhen, Gengchong; Li, Ying; Tong, Yindong; Yang, Lei; Zhu, Yan; Zhang, Wei

2016-05-01

Heavy metals are highly persistent in water and have a particular significance in ecotoxicology. Heavy metals loading from the Pearl River are likely to cause significant impacts on the environment in the South China Sea and the West Pacific. In this study, using monthly monitoring data from a water quality monitoring campaign during 2006-2012, the temporal variation and spatial transfer of six heavy metals (lead (Pb), copper (Cu), cadmium (Cd), zinc (Zn), arsenic (As), and mercury (Hg)) in the Pearl River were analyzed, and the heavy metal fluxes into the sea were calculated. During this period, the annual heavy metal loads discharged from the Pearl River into the South China Sea were 5.8 (Hg), 471.7 (Pb), 1524.6 (Cu), 3819.6 (Zn), 43.9 (Cd), and 621.9 (As) tons, respectively. The metal fluxes showed a seasonal variation with the maximum fluxes occurring from June to July. There is a close association between metal fluxes and runoff. The analysis of the heavy metal transfer from the upstream to the downstream revealed that the transfer from the upstream accounted for a major portion of the heavy metals in the Pearl River Delta. Therefore, earlier industry relocation efforts in the Pearl River watershed may have limited effect on the water quality improvement in surrounding areas. It is suggested that watershed-based pollution control measures focusing on wastewater discharge in both upstream and downstream areas should be developed and implemented in the future.

A priori discretization error metrics for distributed hydrologic modeling applications

NASA Astrophysics Data System (ADS)

Liu, Hongli; Tolson, Bryan A.; Craig, James R.; Shafii, Mahyar

2016-12-01

Watershed spatial discretization is an important step in developing a distributed hydrologic model. A key difficulty in the spatial discretization process is maintaining a balance between the aggregation-induced information loss and the increase in computational burden caused by the inclusion of additional computational units. Objective identification of an appropriate discretization scheme still remains a challenge, in part because of the lack of quantitative measures for assessing discretization quality, particularly prior to simulation. This study proposes a priori discretization error metrics to quantify the information loss of any candidate discretization scheme without having to run and calibrate a hydrologic model. These error metrics are applicable to multi-variable and multi-site discretization evaluation and provide directly interpretable information to the hydrologic modeler about discretization quality. The first metric, a subbasin error metric, quantifies the routing information loss from discretization, and the second, a hydrological response unit (HRU) error metric, improves upon existing a priori metrics by quantifying the information loss due to changes in land cover or soil type property aggregation. The metrics are straightforward to understand and easy to recode. Informed by the error metrics, a two-step discretization decision-making approach is proposed with the advantage of reducing extreme errors and meeting the user-specified discretization error targets. The metrics and decision-making approach are applied to the discretization of the Grand River watershed in Ontario, Canada. Results show that information loss increases as discretization gets coarser. Moreover, results help to explain the modeling difficulties associated with smaller upstream subbasins since the worst discretization errors and highest error variability appear in smaller upstream areas instead of larger downstream drainage areas. Hydrologic modeling experiments under candidate discretization schemes validate the strong correlation between the proposed discretization error metrics and hydrologic simulation responses. Discretization decision-making results show that the common and convenient approach of making uniform discretization decisions across the watershed performs worse than the proposed non-uniform discretization approach in terms of preserving spatial heterogeneity under the same computational cost.

Fine-grained suspended sediment source identification for the Kharaa River basin, northern Mongolia

NASA Astrophysics Data System (ADS)

Rode, Michael; Theuring, Philipp; Collins, Adrian L.

2015-04-01

Fine sediment inputs into river systems can be a major source of nutrients and heavy metals and have a strong impact on the water quality and ecosystem functions of rivers and lakes, including those in semiarid regions. However, little is known to date about the spatial distribution of sediment sources in most large scale river basins in Central Asia. Accordingly, a sediment source fingerprinting technique was used to assess the spatial sources of fine-grained (<10 microns) sediment in the 15 000 km2 Kharaa River basin in northern Mongolia. Five field sampling campaigns in late summer 2009, and spring and late summer in both 2010 and 2011, were conducted directly after high water flows, to collect an overall total of 900 sediment samples. The work used a statistical approach for sediment source discrimination with geochemical composite fingerprints based on a new Genetic Algorithm (GA)-driven Discriminant Function Analysis, the Kruskal-Wallis H-test and Principal Component Analysis. The composite fingerprints were subsequently used for numerical mass balance modelling with uncertainty analysis. The contributions of the individual sub-catchment spatial sediment sources varied from 6.4% (the headwater sub-catchment of Sugnugur Gol) to 36.2% (the Kharaa II sub-catchment in the middle reaches of the study basin) with the pattern generally showing higher contributions from the sub-catchments in the middle, rather than the upstream, portions of the study area. The importance of riverbank erosion was shown to increase from upstream to midstream tributaries. The source tracing procedure provides results in reasonable accordance with previous findings in the study region and demonstrates the general applicability and associated uncertainties of an approach for fine-grained sediment source investigation in large scale semi-arid catchments. The combined application of source fingerprinting and catchment modelling approaches can be used to assess whether tracing estimates are credible and in combination such approaches provide a basis for making sediment source apportionment more compelling to catchment stakeholders and managers.

Are we failing to protect threatened mangroves in the Sundarbans world heritage ecosystem?

PubMed

Sarker, Swapan K; Reeve, Richard; Thompson, Jill; Paul, Nirmal K; Matthiopoulos, Jason

2016-02-16

The Sundarbans, the largest mangrove ecosystem in the world, is under threat from historical and future human exploitation and sea level rise. Limited scientific knowledge on the spatial ecology of the mangroves in this world heritage ecosystem has been a major impediment to conservation efforts. Here, for the first time, we report on habitat suitability analyses and spatial density maps for the four most prominent mangrove species--Heritiera fomes, Excoecaria agallocha, Ceriops decandra and Xylocarpus mekongensis. Globally endangered H. fomes abundances declined as salinity increased. Responses to nutrients, elevation, and stem density varied between species. H. fomes and X. mekongensis preferred upstream habitats. E. agallocha and C. decandra preferred down-stream and mid-stream habitats. Historical harvesting had negative influences on H. fomes, C. decandra and X. mekongensis abundances. The established protected area network does not support the most suitable habitats of these threatened species. We therefore recommend a reconfiguration of the network to include these suitable habitats and ensure their immediate protection. These novel habitat insights and spatial predictions can form the basis for future forest studies and spatial conservation planning, and have implications for more effective conservation of the Sundarbans mangroves and the many other species that rely on them.

Active Brownian motion tunable by light.

PubMed

Buttinoni, Ivo; Volpe, Giovanni; Kümmel, Felix; Volpe, Giorgio; Bechinger, Clemens

2012-07-18

Active Brownian particles are capable of taking up energy from their environment and converting it into directed motion; examples range from chemotactic cells and bacteria to artificial micro-swimmers. We have recently demonstrated that Janus particles, i.e. gold-capped colloidal spheres, suspended in a critical binary liquid mixture perform active Brownian motion when illuminated by light. In this paper, we investigate in more detail their swimming mechanism, leading to active Brownian motion. We show that the illumination-borne heating induces a local asymmetric demixing of the binary mixture, generating a spatial chemical concentration gradient which is responsible for the particle's self-diffusiophoretic motion. We study this effect as a function of the functionalization of the gold cap, the particle size and the illumination intensity: the functionalization determines what component of the binary mixture is preferentially adsorbed at the cap and the swimming direction (towards or away from the cap); the particle size determines the rotational diffusion and, therefore, the random reorientation of the particle; and the intensity tunes the strength of the heating and, therefore, of the motion. Finally, we harness this dependence of the swimming strength on the illumination intensity to investigate the behavior of a micro-swimmer in a spatial light gradient, where its swimming properties are space-dependent.

Interspecific Neighbor Interactions Promote the Positive Diversity-Productivity Relationship in Experimental Grassland Communities

PubMed Central

Zhang, Yuhua; Wang, Yongfan; Yu, Shixiao

2014-01-01

Because the frequency of heterospecific interactions inevitably increases with species richness in a community, biodiversity effects must be expressed by such interactions. However, little is understood how heterospecific interactions affect ecosystem productivity because rarely are biodiversity ecosystem functioning experiments spatially explicitly manipulated. To test the effect of heterospecific interactions on productivity, direct evidence of heterospecific neighborhood interaction is needed. In this study we conducted experiments with a detailed spatial design to investigate whether and how heterospecific neighborhood interactions promote primary productivity in a grassland community. The results showed that increasing the heterospecific: conspecific contact ratio significantly increased productivity. We found there was a significant difference in the variation in plant height between monoculture and mixture communities, suggesting that height-asymmetric competition for light plays a central role in promoting productivity. Heterospecific interactions make tall plants grow taller and short plants become smaller in mixtures compared to monocultures, thereby increasing the efficiency of light interception and utilization. Overyielding in the mixture communities arises from the fact that the loss in the growth of short plants is compensated by the increased growth of tall plants. The positive correlation between species richness and primary production was strengthened by increasing the frequency of heterospecific interactions. We conclude that species richness significantly promotes primary ecosystem production through heterospecific neighborhood interactions. PMID:25350670

Interspecific neighbor interactions promote the positive diversity-productivity relationship in experimental grassland communities.

PubMed

Zhang, Yuhua; Wang, Yongfan; Yu, Shixiao

2014-01-01

Because the frequency of heterospecific interactions inevitably increases with species richness in a community, biodiversity effects must be expressed by such interactions. However, little is understood how heterospecific interactions affect ecosystem productivity because rarely are biodiversity ecosystem functioning experiments spatially explicitly manipulated. To test the effect of heterospecific interactions on productivity, direct evidence of heterospecific neighborhood interaction is needed. In this study we conducted experiments with a detailed spatial design to investigate whether and how heterospecific neighborhood interactions promote primary productivity in a grassland community. The results showed that increasing the heterospecific: conspecific contact ratio significantly increased productivity. We found there was a significant difference in the variation in plant height between monoculture and mixture communities, suggesting that height-asymmetric competition for light plays a central role in promoting productivity. Heterospecific interactions make tall plants grow taller and short plants become smaller in mixtures compared to monocultures, thereby increasing the efficiency of light interception and utilization. Overyielding in the mixture communities arises from the fact that the loss in the growth of short plants is compensated by the increased growth of tall plants. The positive correlation between species richness and primary production was strengthened by increasing the frequency of heterospecific interactions. We conclude that species richness significantly promotes primary ecosystem production through heterospecific neighborhood interactions.

Considering the Spatial Layout Information of Bag of Features (BoF) Framework for Image Classification.

PubMed

Mu, Guangyu; Liu, Ying; Wang, Limin

2015-01-01

The spatial pooling method such as spatial pyramid matching (SPM) is very crucial in the bag of features model used in image classification. SPM partitions the image into a set of regular grids and assumes that the spatial layout of all visual words obey the uniform distribution over these regular grids. However, in practice, we consider that different visual words should obey different spatial layout distributions. To improve SPM, we develop a novel spatial pooling method, namely spatial distribution pooling (SDP). The proposed SDP method uses an extension model of Gauss mixture model to estimate the spatial layout distributions of the visual vocabulary. For each visual word type, SDP can generate a set of flexible grids rather than the regular grids from the traditional SPM. Furthermore, we can compute the grid weights for visual word tokens according to their spatial coordinates. The experimental results demonstrate that SDP outperforms the traditional spatial pooling methods, and is competitive with the state-of-the-art classification accuracy on several challenging image datasets.

Streambed Mobility and Dispersal of Aquatic Insect Larvae: Results from a Laboratory Study.

NASA Astrophysics Data System (ADS)

Kenworthy, S. T.

2002-12-01

Three series of flume experiments were conducted to quantify relationships between entrainment of surface layer gravels and displacement of benthic insect larvae. One series (B) utilized a sediment mixture with a median size 6.9 mm, maximum size 45 mm, and 10% < 2mm. Two other series examined the effects of locally coarsening the bed surface (Bc) and increasing the < 2mm fraction to 20% (S). Aquatic insect larvae were collected in the field and placed in an upstream segment of the flume bed. Flow rate, flume slope, and sediment transport rate were varied systematically among experiments. Displaced larvae were collected in a net at the end of the flume. The distribution of larvae remaining in the bed was obtained by sorting larvae from the sediment in 25 channel segments. Flow rate and mean boundary shear stress varied among runs by factors of 1.2 and 2.4 respectively. Proportional entrainment of >11mm surface grains ranged from <0.05 to >0.90. Displacement of insect larvae increased in a regular and consistent manner with increasing flow strength and surface sediment entrainment. Significant displacement occurred for some types of larvae (Ephemerellid mayflies) over a relatively low range of shear stress and bed surface entrainment. Other larvae (Atherix sp.) were displaced only at the highest levels of bed surface entrainment. Displacement was lower from coarsened bed surfaces in series Bc, and higher from sandier sediments in series S experiments. The differential effects of bed surface entrainment upon various types of larvae are consistent with anatomical and behavioral differences that influence exposure to near-bed flow and bedload transport. These results suggest that spatial patterns of sediment mobilization are important for understanding patterns of dispersal and disturbance of streambed communities.

Temporal and spatial patterns of wetland sedimentation, West Tennessee

USGS Publications Warehouse

Hupp, C.R.; Bazemore, D.E.

1993-01-01

Dendrogeomorphic techniques were used to describe and interpret patterns of sedimentation rates at two forested wetland sites in West Tennessee. Fifty-five sampling stations were established along transects upstream and downstream from bridge structures, and 515 trees were examined for depth of sediment accretion and cored for age determination. Temporal variation in sedimentation rate may be related more to stream channelization and agricultural activity than to bridge and causeway construction. Sedimentation rates have increased substantially in the last 28 years, although channelized streams may have overall lower rates than unchannelized streams. Comparisons of sedimentation rates from deposition over artificial markers (short term) with those determined from tree-ring analysis (long-term) indicate that trends are similar where hydrogeomorphic conditions have not been altered substantially. No tendency for increased sedimentation upstream from bridges was observed. Deposition rates were inversely correlated with elevation and degree of ponding. Downstream deposition of sand splays appears to be related to flow constrictions and may be extensive. Mean overall rates of sedimentation (between 0.24 and 0.28 cm year-1), determined dendrogeomorphically, are comparable with other published rates. ?? 1993.

Long-term memory deficits in Pavlovian fear conditioning in Ca2+/calmodulin kinase kinase alpha-deficient mice.

PubMed

Blaeser, Frank; Sanders, Matthew J; Truong, Nga; Ko, Shanelle; Wu, Long Jun; Wozniak, David F; Fanselow, Michael S; Zhuo, Min; Chatila, Talal A

2006-12-01

Signaling by the Ca(2+)/calmodulin kinase (CaMK) cascade has been implicated in neuronal gene transcription, synaptic plasticity, and long-term memory consolidation. The CaM kinase kinase alpha (CaMKKalpha) isoform is an upstream component of the CaMK cascade whose function in different behavioral and learning and memory paradigms was analyzed by targeted gene disruption in mice. CaMKKalpha mutants exhibited normal long-term spatial memory formation and cued fear conditioning but showed deficits in context fear during both conditioning and long-term follow-up testing. They also exhibited impaired activation of the downstream kinase CaMKIV/Gr and its substrate, the transcription factor cyclic AMP-responsive element binding protein (CREB) upon fear conditioning. Unlike CaMKIV/Gr-deficient mice, the CaMKKalpha mutants exhibited normal long-term potentiation and normal levels of anxiety-like behavior. These results demonstrate a selective role for CaMKKalpha in contextual fear memory and suggest that different combinations of upstream and downstream components of the CaMK cascade may serve distinct physiological functions.

Thermochemically recuperated and steam cooled gas turbine system

DOEpatents

Viscovich, P.W.; Bannister, R.L.

1995-07-11

A gas turbine system is described in which the expanded gas from the turbine section is used to generate the steam in a heat recovery steam generator and to heat a mixture of gaseous hydrocarbon fuel and the steam in a reformer. The reformer converts the hydrocarbon gas to hydrogen and carbon monoxide for combustion in a combustor. A portion of the steam from the heat recovery steam generator is used to cool components, such as the stationary vanes, in the turbine section, thereby superheating the steam. The superheated steam is mixed into the hydrocarbon gas upstream of the reformer, thereby eliminating the need to raise the temperature of the expanded gas discharged from the turbine section in order to achieve effective conversion of the hydrocarbon gas. 4 figs.

Homogenous charge compression ignition engine having a cylinder including a high compression space

DOEpatents

Agama, Jorge R.; Fiveland, Scott B.; Maloney, Ronald P.; Faletti, James J.; Clarke, John M.

2003-12-30

The present invention relates generally to the field of homogeneous charge compression engines. In these engines, fuel is injected upstream or directly into the cylinder when the power piston is relatively close to its bottom dead center position. The fuel mixes with air in the cylinder as the power piston advances to create a relatively lean homogeneous mixture that preferably ignites when the power piston is relatively close to the top dead center position. However, if the ignition event occurs either earlier or later than desired, lowered performance, engine misfire, or even engine damage, can result. Thus, the present invention divides the homogeneous charge between a controlled volume higher compression space and a lower compression space to better control the start of ignition.

Using a filtering task to measure the spatial extent of selective attention

PubMed Central

Palmer, John; Moore, Cathleen M.

2009-01-01

The spatial extent of attention was investigated by measuring sensitivity to stimuli at to-be-ignored locations. Observers detected a stimulus at a cued location (target), while ignoring otherwise identical stimuli at nearby locations (foils). Only an attentional cue distinguished target from foil. Several experiments varied the contrast and separation of targets and foils. Two theories of selection were compared: contrast gain and a version of attention switching called an all-or-none mixture model. Results included large effects of separation, rejection of the contrast gain model, and the measurement of the size and profile of the spatial extent of attention. PMID:18405935

The value of biodiversity for the functioning of tropical forests: insurance effects during the first decade of the Sabah biodiversity experiment.

PubMed

Tuck, Sean L; O'Brien, Michael J; Philipson, Christopher D; Saner, Philippe; Tanadini, Matteo; Dzulkifli, Dzaeman; Godfray, H Charles J; Godoong, Elia; Nilus, Reuben; Ong, Robert C; Schmid, Bernhard; Sinun, Waidi; Snaddon, Jake L; Snoep, Martijn; Tangki, Hamzah; Tay, John; Ulok, Philip; Wai, Yap Sau; Weilenmann, Maja; Reynolds, Glen; Hector, Andy

2016-12-14

One of the main environmental threats in the tropics is selective logging, which has degraded large areas of forest. In southeast Asia, enrichment planting with seedlings of the dominant group of dipterocarp tree species aims to accelerate restoration of forest structure and functioning. The role of tree diversity in forest restoration is still unclear, but the 'insurance hypothesis' predicts that in temporally and spatially varying environments planting mixtures may stabilize functioning owing to differences in species traits and ecologies. To test for potential insurance effects, we analyse the patterns of seedling mortality and growth in monoculture and mixture plots over the first decade of the Sabah biodiversity experiment. Our results reveal the species differences required for potential insurance effects including a trade-off in which species with denser wood have lower growth rates but higher survival. This trade-off was consistent over time during the first decade, but growth and mortality varied spatially across our 500 ha experiment with species responding to changing conditions in different ways. Overall, average survival rates were extreme in monocultures than mixtures consistent with a potential insurance effect in which monocultures of poorly surviving species risk recruitment failure, whereas monocultures of species with high survival have rates of self-thinning that are potentially wasteful when seedling stocks are limited. Longer-term monitoring as species interactions strengthen will be needed to more comprehensively test to what degree mixtures of species spread risk and use limited seedling stocks more efficiently to increase diversity and restore ecosystem structure and functioning. © 2016 The Authors.

The value of biodiversity for the functioning of tropical forests: insurance effects during the first decade of the Sabah biodiversity experiment

PubMed Central

O'Brien, Michael J.; Philipson, Christopher D.; Saner, Philippe; Tanadini, Matteo; Dzulkifli, Dzaeman; Godoong, Elia; Nilus, Reuben; Ong, Robert C.; Schmid, Bernhard; Sinun, Waidi; Snaddon, Jake L.; Snoep, Martijn; Tangki, Hamzah; Tay, John; Ulok, Philip; Wai, Yap Sau; Weilenmann, Maja; Reynolds, Glen

2016-01-01

One of the main environmental threats in the tropics is selective logging, which has degraded large areas of forest. In southeast Asia, enrichment planting with seedlings of the dominant group of dipterocarp tree species aims to accelerate restoration of forest structure and functioning. The role of tree diversity in forest restoration is still unclear, but the ‘insurance hypothesis’ predicts that in temporally and spatially varying environments planting mixtures may stabilize functioning owing to differences in species traits and ecologies. To test for potential insurance effects, we analyse the patterns of seedling mortality and growth in monoculture and mixture plots over the first decade of the Sabah biodiversity experiment. Our results reveal the species differences required for potential insurance effects including a trade-off in which species with denser wood have lower growth rates but higher survival. This trade-off was consistent over time during the first decade, but growth and mortality varied spatially across our 500 ha experiment with species responding to changing conditions in different ways. Overall, average survival rates were extreme in monocultures than mixtures consistent with a potential insurance effect in which monocultures of poorly surviving species risk recruitment failure, whereas monocultures of species with high survival have rates of self-thinning that are potentially wasteful when seedling stocks are limited. Longer-term monitoring as species interactions strengthen will be needed to more comprehensively test to what degree mixtures of species spread risk and use limited seedling stocks more efficiently to increase diversity and restore ecosystem structure and functioning. PMID:27928046

Spatial and temporal patterns of micropollutants in streams and effluent of 24 WWTPs across Switzerland

NASA Astrophysics Data System (ADS)

Schönenberger, Urs; Spycher, Barbara; Kistler, David; Burdon, Frank; Reyes, Marta; Eggen, Rik; Joss, Adriano; Singer, Heinz; Stamm, Christian

2016-04-01

Treated municipal wastewater is an important source of micropollutants entering the environment. Micropollutants are a diverse range of chemicals of which concentrations vary strongly in space and time. To better quantitatively understand the spatio-temporal patterns of micropollutants in streams, we compared upstream and downstream locations at 24 wastewater treatment plants (WWTPs) across the Swiss Plateau and Jura regions. Each site represents the most upstream treatment plant in the corresponding catchment. In 2013, a broad analytical screening was applied to samples collected at 12 sites during winter (January) and summer conditions (June). Based in these results, the bi-monthly samples obtained in 2014 at 12 additional sites were analysed for a group of approximately 60 selected organic micropollutants. The screening results demonstrate that generally, pharmaceuticals, artificial sweeteners and corrosion inhibitors make up the largest share of the organic micropollutants in wastewater. Pesticides including biocides and plant protection products are also regularly found, but at lower concentrations. The opposite holds true for the concentration variability: pesticides vary the most across time and space, while pharmaceuticals exhibit more stable concentrations. Heavy metals fluctuate to a similar degree as pharmaceuticals. Principal component analyses suggest that pesticide and pharmaceutical levels at both upstream locations and in the wastewater vary independently of each other. At the upstream locations, the pesticide levels increased with the proportion of arable land in the watershed, whilst decreasing with greater cover of pasture and forest. Interestingly, the same patterns hold true for the composition of wastewater when considering land use in the catchments of the WWTPs. This suggests that pesticide-intensive agricultural crops not only impact surface water quality via diffuse pollution but also increase levels of pesticides in wastewater discharged to the streams. As a consequence, catchment land uses and effluent composition appear to be inextricably bound.

Beyond police crisis intervention: moving "upstream" to manage cases and places of behavioral health vulnerability.

PubMed

Wood, Jennifer D; Beierschmitt, Laura

2014-01-01

Law enforcement officers continue to serve on the front lines as mental health interventionists, and as such have been subject to a wave of "first generation" reform designed to enhance their crisis response capabilities. Yet, this focus on crisis intervention has not answered recent calls to move "upstream" and bolster early intervention in the name of long-term recovery. This paper reports on findings from an action research project in Philadelphia aimed at exploring opportunities for enhanced upstream engagement. Study methods include spatial analyses of police mental health transportations from an eight year period (2004-2011) and qualitative data from twenty-three "framing conversations" with partners and other stakeholders, seven focus groups with police and outreach workers, five key informant interviews as well as document reviews of the service delivery system in Philadelphia. Recommendations include the need to move beyond a focus on what police can do to a wider conception of city agencies and business stakeholders who can influence vulnerable people and vulnerable spaces of the city. We argue for the need to develop shared principles and rules of engagement that clarify roles and stipulate how best to enlist city resources in a range of circumstances. Since issues of mental health, substance use and disorder are so tightly coupled, we stress the importance of establishing a data-driven approach to crime and disorder reduction in areas of the city we term "hotspots of vulnerability". In line with a recovery philosophy, such an approach should reduce opportunities for anti-social behavior among the "dually labeled" in ways consistent with "procedural justice". Furthermore, crime and disorder data flowing from police and security to behavioral health analysts could contribute to a more focused case management of "repeat utilizers" across the two systems. Our central argument is that a twin emphasis on "case management" and "place management" may provide the pillars needed to move upstream and strengthen interventions along a continuum of engagement. Copyright © 2014 Elsevier Ltd. All rights reserved.

Long river profiles, tectonism, and eustasy: A guide to interpreting fluvial terraces

NASA Technical Reports Server (NTRS)

Merritts, Dorothy J.; Vincent, Kirk R.; Wohl, Ellen E.

1994-01-01

Along three rivers at the Mendocino triple junction, northern California, strath, cut, and fill terraces have formed in response to tectonic and eustatic processes. Detailed surveying and radiometric dating at multiple sites indicate that lower reaches of the rivers are dominated by the effects of oscillating sea level, primarily aggradation and formation of fill terraces during sea level high stands, alternating with deep incision during low stands. A eustasy-driven depositional wedge extends tens of kilometers upstream on all rivers (tapering to zero thickness). This distance is greater than expected from studies of the effects of check dams on much smaller streams elsewhere, due in part to the large size of these rivers. However, the change in gradient is nearly identical to other base level rise studies: the depositional gradient is about half that of the original channel. Middle to upper reaches of each river are dominated by the effects of long-term uplift, primarily lateral and vertical erosion and formation of steep, unpaired strath terraces exposed only upstream of the depositional wedge. Vertical incision at a rate similar to that of uplift has occurred even during the present sea level high stand along rivers with highest uplift rates. Strath terraces have steeper gradients than the modern channel bed and do not merge with marine terraces at the river mouth; consequently, they cannot be used to determine altitudes of sea level high stands. Strath formation is a continuous process of response to long-term uplift, and its occurrence varies spatially along a river depending on stream power, and hence position, upstream. Strath terraces are found only along certain parts of a coastal stream: upstream of the aggradational effects of oscillating sea level, and far enough downstream that stream power is in excess of that needed to transport the prevailing sediment load. For a given size river, the greater the uplift rate, the greater the rate of vertical incision and, consequently, the less the likelihood of strath terrace formation and preservation.

[Combined effects of benzene and chromium on navigation learning and long-term spatial memory in rats].

PubMed

Tikhonov, V V; Ermolina, E V; Miroshnichenko, I V

2009-01-01

The impact of long-term intake of drinking water containing the high level of chromium and benzene or their mixture on navigation learning and long-term spatial memory was studied in a Morris water maze. The chronic neurotoxic effect of benzene was characterized by worse long-term memory, which upon its exposure in combination with chromium remained unchanged and failed to block the realization of a positive effect of chromium on the mechanism of navigation learning.

Bed Surface Adjustments to Spatially Variable Flow in Low Relative Submergence Regimes

NASA Astrophysics Data System (ADS)

Monsalve, A.; Yager, E. M.

2017-11-01

In mountainous rivers, large relatively immobile grains partly control the local and reach-averaged flow hydraulics and sediment fluxes. When the flow depth is similar to the size of these grains (low relative submergence), heterogeneous flow structures and plunging flow cause spatial distributions of bed surface elevations, textures, and sedimentation rates. To explore how the bed surface responds to these flow variations we conducted a set of experiments in which we varied the relative submergence of staggered hemispheres (simulated large boulders) between runs. All experiments had the same average sediment transport capacity, upstream sediment supply, and initial bed thickness and grain size distribution. We combined our laboratory measurements with a 3-D flow model to obtain the detailed flow structure around the hemispheres. The local bed shear stress field displayed substantial variability and controlled the bed load transport rates and direction in which sediment moved. The divergence in bed shear stress caused by the hemispheres promoted size-selective bed load deposition, which formed patches of coarse sediment upstream of the hemisphere. Sediment deposition caused a decrease in local bed shear stress, which combined with the coarser grain size, enhanced the stability of this patch. The region downstream of the hemispheres was largely controlled by a recirculation zone and had little to no change in grain size, bed elevation, and bed shear stress. The formation, development, and stability of sediment patches in mountain streams is controlled by the bed shear stress divergence and magnitude and direction of the local bed shear stress field.

Trophic State Evolution and Nutrient Trapping Capacity in a Transboundary Subtropical Reservoir: A 25-Year Study

NASA Astrophysics Data System (ADS)

Cunha, Davi Gasparini Fernandes; Benassi, Simone Frederigi; de Falco, Patrícia Bortoletto; do Carmo Calijuri, Maria

2016-03-01

Artificial reservoirs have been used for drinking water supply, other human activities, flood control and pollution abatement worldwide, providing overall benefits to downstream water quality. Most reservoirs in Brazil were built during the 1970s, but their long-term patterns of trophic status, water chemistry, and nutrient removal are still not very well characterized. We aimed to evaluate water quality time series (1985-2010) data from the riverine and lacustrine zones of the transboundary Itaipu Reservoir (Brazil/Paraguay). We examined total phosphorus and nitrogen, chlorophyll a concentrations, water transparency, and phytoplankton density to look for spatial and temporal trends and correlations with trophic state evolution and nutrient retention. There was significant temporal and spatial water quality variation ( P < 0.01, ANCOVA). The results indicated that the water quality and structure of the reservoir were mainly affected by one internal force (hydrodynamics) and one external force (upstream cascading reservoirs). Nutrient and chlorophyll a concentrations tended to be lower in the lacustrine zone and decreased over the 25-year timeframe. Reservoir operational features seemed to be limiting primary production and phytoplankton development, which exhibited a maximum density of 6050 org/mL. The relatively small nutrient concentrations in the riverine zone were probably related to the effect of the cascade reservoirs upstream of Itaipu and led to relatively low removal percentages. Our study suggested that water quality problems may be more pronounced immediately after the filling phase of the artificial reservoirs, associated with the initial decomposition of drowned vegetation at the very beginning of reservoir operation.

Trophic State Evolution and Nutrient Trapping Capacity in a Transboundary Subtropical Reservoir: A 25-Year Study.

PubMed

Cunha, Davi Gasparini Fernandes; Benassi, Simone Frederigi; de Falco, Patrícia Bortoletto; Calijuri, Maria do Carmo

2016-03-01

Artificial reservoirs have been used for drinking water supply, other human activities, flood control and pollution abatement worldwide, providing overall benefits to downstream water quality. Most reservoirs in Brazil were built during the 1970s, but their long-term patterns of trophic status, water chemistry, and nutrient removal are still not very well characterized. We aimed to evaluate water quality time series (1985-2010) data from the riverine and lacustrine zones of the transboundary Itaipu Reservoir (Brazil/Paraguay). We examined total phosphorus and nitrogen, chlorophyll a concentrations, water transparency, and phytoplankton density to look for spatial and temporal trends and correlations with trophic state evolution and nutrient retention. There was significant temporal and spatial water quality variation (P < 0.01, ANCOVA). The results indicated that the water quality and structure of the reservoir were mainly affected by one internal force (hydrodynamics) and one external force (upstream cascading reservoirs). Nutrient and chlorophyll a concentrations tended to be lower in the lacustrine zone and decreased over the 25-year timeframe. Reservoir operational features seemed to be limiting primary production and phytoplankton development, which exhibited a maximum density of 6050  org/mL. The relatively small nutrient concentrations in the riverine zone were probably related to the effect of the cascade reservoirs upstream of Itaipu and led to relatively low removal percentages. Our study suggested that water quality problems may be more pronounced immediately after the filling phase of the artificial reservoirs, associated with the initial decomposition of drowned vegetation at the very beginning of reservoir operation.

Strategies to optimize monitoring schemes of recreational waters from Salta, Argentina: a multivariate approach

PubMed Central

Gutiérrez-Cacciabue, Dolores; Teich, Ingrid; Poma, Hugo Ramiro; Cruz, Mercedes Cecilia; Balzarini, Mónica; Rajal, Verónica Beatriz

2014-01-01

Several recreational surface waters in Salta, Argentina, were selected to assess their quality. Seventy percent of the measurements exceeded at least one of the limits established by international legislation becoming unsuitable for their use. To interpret results of complex data, multivariate techniques were applied. Arenales River, due to the variability observed in the data, was divided in two: upstream and downstream representing low and high pollution sites, respectively; and Cluster Analysis supported that differentiation. Arenales River downstream and Campo Alegre Reservoir were the most different environments and Vaqueros and La Caldera Rivers were the most similar. Canonical Correlation Analysis allowed exploration of correlations between physicochemical and microbiological variables except in both parts of Arenales River, and Principal Component Analysis allowed finding relationships among the 9 measured variables in all aquatic environments. Variable’s loadings showed that Arenales River downstream was impacted by industrial and domestic activities, Arenales River upstream was affected by agricultural activities, Campo Alegre Reservoir was disturbed by anthropogenic and ecological effects, and La Caldera and Vaqueros Rivers were influenced by recreational activities. Discriminant Analysis allowed identification of subgroup of variables responsible for seasonal and spatial variations. Enterococcus, dissolved oxygen, conductivity, E. coli, pH, and fecal coliforms are sufficient to spatially describe the quality of the aquatic environments. Regarding seasonal variations, dissolved oxygen, conductivity, fecal coliforms, and pH can be used to describe water quality during dry season, while dissolved oxygen, conductivity, total coliforms, E. coli, and Enterococcus during wet season. Thus, the use of multivariate techniques allowed optimizing monitoring tasks and minimizing costs involved. PMID:25190636

DetectTLC: Automated Reaction Mixture Screening Utilizing Quantitative Mass Spectrometry Image Feature

PubMed Central

Kaddi, Chanchala D.; Bennett, Rachel V.; Paine, Martin R. L.; Banks, Mitchel D.; Weber, Arthur L.; Fernández, Facundo M.; Wang, May D.

2016-01-01

Full characterization of complex reaction mixtures is necessary to understand mechanisms, optimize yields, and elucidate secondary reaction pathways. Molecular-level information for species in such mixtures can be readily obtained by coupling mass spectrometry imaging (MSI) with thin layer chromatography (TLC) separations. User-guided investigation of imaging data for mixture components with known m/z values is generally straightforward; however, spot detection for unknowns is highly tedious, and limits the applicability of MSI in conjunction with TLC. To accelerate imaging data mining, we developed DetectTLC, an approach that automatically identifies m/z values exhibiting TLC spot-like regions in MS molecular images. Furthermore, DetectTLC can also spatially match m/z values for spots acquired during alternating high and low collision-energy scans, pairing product ions with precursors to enhance structural identification. As an example, DetectTLC is applied to the identification and structural confirmation of unknown, yet significant, products of abiotic pyrazinone and aminopyrazine nucleoside analog synthesis. PMID:26508443

Ultra-thin layer chromatography and surface enhanced Raman spectroscopy on silver nanorod array substrates prepared by oblique angle deposition

NASA Astrophysics Data System (ADS)

Chen, Jing; Abell, Justin; Huang, Yao-wen; Zhao, Yiping

2012-06-01

We demonstrate the potential use of silver nanorod (AgNR) array substrates for on-chip separation and detection of chemical mixtures by ultra-thin layer chromatography (UTLC) and surface enhanced Raman spectroscopy (SERS). The capability of the AgNR substrates to separate different compounds in a mixture was explored using a mixture of the food colorant Brilliant Blue FCF and lactic acid, and the mixtures of Methylene Violet and BSA at various concentrations. After the UTLC process, spatially-resolved SERS spectra were collected along the mobile phase development direction and the intensities of specific SERS peaks from each component were used to generate chromatograms. The AgNR substrates demonstrate the capability of separating Brilliant Blue from lactic acid, as well as revealing the SERS signal of Methylene Violet from the massive BSA background after a simple UTLC step. This technique may have significant practical implications in actual detection of small molecules from complex food or clinical backgrounds.

Effects of variation in chain length on ternary polymer electrolyte - Ionic liquid mixture - A molecular dynamics simulation study

NASA Astrophysics Data System (ADS)

Raju, S. G.; Hariharan, Krishnan S.; Park, Da-Hye; Kang, HyoRang; Kolake, Subramanya Mayya

2015-10-01

Molecular dynamics (MD) simulations of ternary polymer electrolyte - ionic liquid mixtures are conducted using an all-atom model. N-alkyl-N-methylpyrrolidinium bis(trifluoromethylsulfonyl)imide ([CnMPy][TFSI], n = 1, 3, 6, 9) and polyethylene oxide (PEO) are used. Microscopic structure, energetics and dynamics of ionic liquid (IL) in these ternary mixtures are studied. Properties of these four pure IL are also calculated and compared to that in ternary mixtures. Interaction between pyrrolidinium cation and TFSI is stronger and there is larger propensity of ion-pair formation in ternary mixtures. Unlike the case in imidazolium IL, near neighbor structural correlation between TFSI reduces with increase in chain length on cation in both pure IL and ternary mixtures. Using spatial density maps, regions where PEO and TFSI interact with pyrrolidinium cation are identified. Oxygens of PEO are above and below the pyrrolidinium ring and away from the bulky alkyl groups whereas TFSI is present close to nitrogen atom of CnMPy. In pure IL, diffusion coefficient (D) of C3MPy is larger than of TFSI but D of C9MPy and C6MPy are larger than that of TFSI. The reasons for alkyl chain dependent phenomena are explored.

Investigation into Behavior of a Steam-Water Mixture Flow Through Holes in a Submerged Perforated Sheet at High Void Fractions

NASA Astrophysics Data System (ADS)

Melikhov, V. I.; Melikhov, O. I.; Nerovnov, A. A.; Nikonov, S. M.

2018-01-01

Processing of experimental data on the pressure difference across a submerged perforated sheet (SPS) revealed that, at sufficiently high void fractions under SPS, the pressure difference across it became less than the pressure difference for the pure steam stream with the same flowrate. To find the cause of this, the effect of a liquid film, which can be formed on the SPS upstream surface as a result of water droplets' impact and can smooth over sharp edges of holes in SDS, was examined. This can decrease the pressure drop across the sharp edges of holes. This assumption was checked through numerical solution to several model problems in the axisymmetric formulation for a steam flow in a round pipe with an orifice. The flow of steam and water was modeled using the viscous incompressible liquid approximation, while the turbulence was described by the k-ɛ model. The evolution of the interfacial area was modeled using the VOF model. The following model problems of steam flow through an orifice were studied: a single-phase flow, a flow through the orifice with a liquid film on its upstream surface, a flow through a chamfered hole, and a flow through the orifice with a liquid film on its upstream surface without liquid supply to the film. The predictions demonstrate that even the approximate account of the liquid film effect on the steam flow yields a considerable decrease in the pressure drop across the hole (from 8 to 24%) due to smoothing its sharp outlet edges over. This makes it possible to make a conclusion that the cause of a decrease in the pressure drop across SPS observed in the experiments at high void fractions is the formation of a liquid film, which smooths the sharp edges of the hole.

In situ impact assessment of wastewater effluents by integrating multi-level biomarker responses in the pale chub (Zacco platypus).

PubMed

Kim, Woo-Keun; Jung, Jinho

2016-06-01

The integration of biomarker responses ranging from the molecular to the individual level is of great interest for measuring the toxic effects of hazardous chemicals or effluent mixtures on aquatic organisms. This study evaluated the effects of wastewater treatment plant (WWTP) effluents on the freshwater pale chub Zacco platypus by using multi-level biomarker responses at molecular [mRNA expression of catalase (CAT), superoxide dismutase (SOD), glutathione S-transferase (GST), and metallothionein (MT)], biochemical (enzyme activities of CAT, SOD, GST, and concentration of MT), and physiological [condition factor (CF) and liver somatic index (LSI)] levels. The mRNA expression levels of GST and MT in Z. platypus from a site downstream of a WWTP significantly increased by 2.2- and 4.5-fold (p<0.05) when compared with those from an upstream site. However, the enzyme activities of CAT, SOD, and GST in fish from the downstream site significantly decreased by 43%, 98%, and 13%, respectively (p<0.05), except for an increase in MT concentration (41%). In addition, a significant increase in LSI (46%) was observed in Z. platypus from the downstream site (p<0.05). Concentrations of Cu, Zn, Cd, and Pb in the liver of Z. platypus were higher (530%, 353%, 800%, and 2,200%, respectively) in fish from a downstream site than in fish from an upstream location, and several multi-level biomarker responses were significantly correlated with the accumulated metals in Z. platypus (p<0.05). Integrated biomarker responses at molecular, biochemical, and physiological levels (multi-level IBR) were much higher (about 4-fold) at the downstream site than at the upstream site. This study suggests that the multi-level IBR approach is very useful for quantifying in situ adverse effects of WWTP effluents. Copyright © 2016 Elsevier Inc. All rights reserved.

Estimation of sub-pixel water area on Tibet plateau using multiple endmembers spectral mixture spectral analysis from MODIS data

NASA Astrophysics Data System (ADS)

Cui, Qian; Shi, Jiancheng; Xu, Yuanliu

2011-12-01

Water is the basic needs for human society, and the determining factor of stability of ecosystem as well. There are lots of lakes on Tibet Plateau, which will lead to flood and mudslide when the water expands sharply. At present, water area is extracted from TM or SPOT data for their high spatial resolution; however, their temporal resolution is insufficient. MODIS data have high temporal resolution and broad coverage. So it is valuable resource for detecting the change of water area. Because of its low spatial resolution, mixed-pixels are common. In this paper, four spectral libraries are built using MOD09A1 product, based on that, water body is extracted in sub-pixels utilizing Multiple Endmembers Spectral Mixture Analysis (MESMA) using MODIS daily reflectance data MOD09GA. The unmixed result is comparing with contemporaneous TM data and it is proved that this method has high accuracy.

Relaxation and diffusion of perfluorocarbon gas mixtures with oxygen for lung MRI

NASA Astrophysics Data System (ADS)

Chang, Yulin V.; Conradi, Mark S.

2006-08-01

We report measurements of free diffusivity D0 and relaxation times T1 and T2 for pure C 2F 6 and C 3F 8 and their mixtures with oxygen. A simplified relaxation theory is presented and used to fit the data. The results enable spatially localized relaxation time measurements to determine the local gas concentration in lung MR images, so the free diffusivity D0 is then known. Comparison of the measured diffusion to D0 will express the extent of diffusion restriction and allow the local surface-to-volume ratio to be found.

Separation of methane-nitrogen mixtures using synthesis vertically aligned carbon nanotube membranes

NASA Astrophysics Data System (ADS)

Gilani, Neda; Daryan, Jafar Towfighi; Rashidi, Alimorad; Omidkhah, Mohammad Reza

2012-03-01

In this paper, capabilities of carbon nanotube (CNT) membranes fabricated in cylindrical pores of anodic aluminum oxide (AAO) substrate to separate the binary mixtures of CH4/N2 are studied experimentally. For this purpose, the permeability and selectivity of three CNT/AAO membranes with different growth time as 6 h, 12 h and 18 h are investigated. CNTs are grown vertically through holes of AAO with average pore diameter of 45 nm by chemical vapor deposition (CVD) of acetylene gas. CNT/AAO membranes with the same CNTs' outer diameters and different inner diameters are synthesized. The AAO are characterized by SEM analysis. In addition, SEM, TEM, BET N2 adsorption analysis and Raman spectroscopy are employed to characterize aligned CNTs. Study on permeability and selectivity of membranes for three binary mixtures of CH4/N2 showed that when the CNT inner diameters are 34 nm and 24 nm, viscous flow is the governing mechanism and insignificant selectivities of 1.2-1.24 are achieved. However, the membrane with CNT inner diameter and wall thickness of 8 nm and 16 nm respectively is considerably selective for CH4 over N2. It was also found that CH4 mole fraction in the feed and upstream feed pressure have major effect on permeability and selectivity. The membrane with 18 h synthesis time showed the selectivity is in the range of 1.8-3.85. The enhancement factor for N2 single gas diffusivity was also found to be about three times larger than that predicted by Knudsen diffusion model.

Modeling avian abundance from replicated counts using binomial mixture models

USGS Publications Warehouse

Kery, Marc; Royle, J. Andrew; Schmid, Hans

2005-01-01

Abundance estimation in ecology is usually accomplished by capture–recapture, removal, or distance sampling methods. These may be hard to implement at large spatial scales. In contrast, binomial mixture models enable abundance estimation without individual identification, based simply on temporally and spatially replicated counts. Here, we evaluate mixture models using data from the national breeding bird monitoring program in Switzerland, where some 250 1-km2 quadrats are surveyed using the territory mapping method three times during each breeding season. We chose eight species with contrasting distribution (wide–narrow), abundance (high–low), and detectability (easy–difficult). Abundance was modeled as a random effect with a Poisson or negative binomial distribution, with mean affected by forest cover, elevation, and route length. Detectability was a logit-linear function of survey date, survey date-by-elevation, and sampling effort (time per transect unit). Resulting covariate effects and parameter estimates were consistent with expectations. Detectability per territory (for three surveys) ranged from 0.66 to 0.94 (mean 0.84) for easy species, and from 0.16 to 0.83 (mean 0.53) for difficult species, depended on survey effort for two easy and all four difficult species, and changed seasonally for three easy and three difficult species. Abundance was positively related to route length in three high-abundance and one low-abundance (one easy and three difficult) species, and increased with forest cover in five forest species, decreased for two nonforest species, and was unaffected for a generalist species. Abundance estimates under the most parsimonious mixture models were between 1.1 and 8.9 (median 1.8) times greater than estimates based on territory mapping; hence, three surveys were insufficient to detect all territories for each species. We conclude that binomial mixture models are an important new approach for estimating abundance corrected for detectability when only repeated-count data are available. Future developments envisioned include estimation of trend, occupancy, and total regional abundance.

Disentangling the Role of the MEC and LEC in the Processing of Spatial and Non-Spatial Information: Contribution of Lesion Studies

PubMed Central

Save, Etienne; Sargolini, Francesca

2017-01-01

It is now widely accepted that the entorhinal cortex (EC) plays a pivotal role in the processing of spatial information and episodic memory. The EC is segregated into two sub-regions, the medial EC (MEC) and the lateral EC (LEC) but a comprehensive understanding of their roles across multiple behavioral contexts remains unclear. Considering that it is still useful to investigate the impact of lesions of EC on behavior, we review the contribution of lesion approach to our knowledge of EC functions. We show that the MEC and LEC play different roles in the processing of spatial and non-spatial information. The MEC is necessary to the use of distal but not proximal landmarks during navigation and is crucial for path integration, in particular integration of linear movements. Consistent with predominant hypothesis, the LEC is important for combining the spatial and non-spatial aspects of the environment. However, object exploration studies suggest that the functional segregation between the MEC and the LEC is not as clearly delineated and is dependent on environmental and behavioral factors. Manipulation of environmental complexity and therefore of cognitive demand shows that the MEC and the LEC are not strictly necessary to the processing of spatial and non-spatial information. In addition we suggest that the involvement of these sub-regions can depend on the kind of behavior, i.e., navigation or exploration, exhibited by the animals. Thus, the MEC and the LEC work in a flexible manner to integrate the “what” and “where” information in episodic memory upstream the hippocampus. PMID:29163076

Optimal Sparse Upstream Sensor Placement for Hydrokinetic Turbines

NASA Astrophysics Data System (ADS)

Cavagnaro, Robert; Strom, Benjamin; Ross, Hannah; Hill, Craig; Polagye, Brian

2016-11-01

Accurate measurement of the flow field incident upon a hydrokinetic turbine is critical for performance evaluation during testing and setting boundary conditions in simulation. Additionally, turbine controllers may leverage real-time flow measurements. Particle image velocimetry (PIV) is capable of rendering a flow field over a wide spatial domain in a controlled, laboratory environment. However, PIV's lack of suitability for natural marine environments, high cost, and intensive post-processing diminish its potential for control applications. Conversely, sensors such as acoustic Doppler velocimeters (ADVs), are designed for field deployment and real-time measurement, but over a small spatial domain. Sparsity-promoting regression analysis such as LASSO is utilized to improve the efficacy of point measurements for real-time applications by determining optimal spatial placement for a small number of ADVs using a training set of PIV velocity fields and turbine data. The study is conducted in a flume (0.8 m2 cross-sectional area, 1 m/s flow) with laboratory-scale axial and cross-flow turbines. Predicted turbine performance utilizing the optimal sparse sensor network and associated regression model is compared to actual performance with corresponding PIV measurements.

A spatial model for a stream networks of Citarik River with the environmental variables: potential of hydrogen (PH) and temperature

NASA Astrophysics Data System (ADS)

Bachrudin, A.; Mohamed, N. B.; Supian, S.; Sukono; Hidayat, Y.

2018-03-01

Application of existing geostatistical theory of stream networks provides a number of interesting and challenging problems. Most of statistical tools in the traditional geostatistics have been based on a Euclidean distance such as autocovariance functions, but for stream data is not permissible since it deals with a stream distance. To overcome this autocovariance developed a model based on the distance the flow with using convolution kernel approach (moving average construction). Spatial model for a stream networks is widely used to monitor environmental on a river networks. In a case study of a river in province of West Java, the objective of this paper is to analyze a capability of a predictive on two environmental variables, potential of hydrogen (PH) and temperature using ordinary kriging. Several the empirical results show: (1) The best fit of autocovariance functions for temperature and potential hydrogen (ph) of Citarik River is linear which also yields the smallest root mean squared prediction error (RMSPE), (2) the spatial correlation values between the locations on upstream and on downstream of Citarik river exhibit decreasingly

Variation in local abundance and species richness of stream fishes in relation to dispersal barriers: Implications for management and conservation

USGS Publications Warehouse

Nislow, K.H.; Hudy, M.; Letcher, B.H.; Smith, E.P.

2011-01-01

1.Barriers to immigration, all else being equal, should in principle depress local abundance and reduce local species richness. These issues are particularly relevant to stream-dwelling species when improperly designed road crossings act as barriers to migration with potential impacts on the viability of upstream populations. However, because abundance and richness are highly spatially and temporally heterogeneous and the relative importance of immigration on demography is uncertain, population- and community-level effects can be difficult to detect. 2.In this study, we tested the effects of potential barriers to upstream movements on the local abundance and species richness of a diverse assemblage of resident stream fishes in the Monongahela National Forest, West Virginia, U.S.A. Fishes were sampled using simple standard techniques above- and below road crossings that were either likely or unlikely to be barriers to upstream fish movements (based on physical dimensions of the crossing). We predicted that abundance of resident fishes would be lower in the upstream sections of streams with predicted impassable barriers, that the strength of the effect would vary among species and that variable effects on abundance would translate into lower species richness. 3.Supporting these predictions, the statistical model that best accounted for variation in abundance and species richness included a significant interaction between location (upstream or downstream of crossing) and type (passable or impassable crossing). Stream sections located above predicated impassable culverts had fewer than half the number of species and less than half the total fish abundance, while stream sections above and below passable culverts had essentially equivalent richness and abundance. 4.Our results are consistent with the importance of immigration and population connectivity to local abundance and species richness of stream fishes. In turn, these results suggest that when measured at appropriate scales (multiple streams within catchments), with simple protocols amenable to use by management agencies, differences in local abundance and species richness may serve as indicators of the extent to which road crossings are barriers to fish movement and help determine whether road-crossing improvements have restored connectivity to stream fish populations and communities. Published 2011. This article is a US Government work and is in the public domain in the USA.

Hydrochemical study of an arsenic-contaminated plain in Guandu, north Taiwan

NASA Astrophysics Data System (ADS)

Hsiao, Yu-Hsiang

2015-04-01

Arsenic pollution in Guandu Plain, north Taiwan is a critical issue due to highly developed anthropogenic activities. It was considered that arsenic was carried in by surface water system. Two major rivers, Huanggang Creek and South Huang Greek, flow through Guandu Plain. Both creeks originate from Tatung Volcano Group, which is extensively active in post-volcanic activities. In this study, the hydrochemistry along the two major rivers was studied for tracing the source of arsenic pollution in Guandu Plain. The pH values in the upstream water are in the range from 6 to 8 but dramatically decrease down to 2-4.5 in the downstream area. It can be concluded that the creeks are recharged with very low pH geothermal water. In addition, arsenic shows a different spatial distribution. In Huanggang Creek, arsenic concentration is much higher, about 200 ppb to 500 ppb, in the downstream than in the upstream while arsenic concentration is extremely low, below 1 ppb, in the downstream of South Huang Greek. The geochemical results show that rare earth elements (REEs) are depleted in the upstream both in Huanggang creek and South Huang creek, and the NASC-normalized ratios of heavy to light REE (Lu/La) in the upstream are very close to 1. This demonstrates that the upstream water is geochemically dominated by the interaction between water and sedimentary rock. In the downstream, the NASC-normalized REE pattern shows a quit different type which is depleted in light REEs (much higher Lu/La ratio). It is well known that igneous rock is depleted in light REEs; therefore, arsenic is possibly volcanic origin. In this study, PHREEQC, a thermodynamic modeling program, was also utilized to calculate the saturation index (SI) of hydrous ferric oxide (HFO), which can effectively scavenge arsenic in water. The results demonstrate that SI of HFO is mainly controlled by pH in this study. When pH is greater than 3.5, HFO start to precipitate and remove arsenic from water. Therefore, it is believed that the arsenic pollution in Guandu Plain could result from HFO co-precipitation due to the increase of pH when Huanggang creek and South Huang creek flow through the land.

Spatial and Temporal Energy Characterization of Precipitating Electrons for the January 10th, 1997 Magnetic Cloud Event

NASA Technical Reports Server (NTRS)

Spann, J. F., Jr.; Germany, G. A.; Brittnacher, M. J.; Parks, G. K.; Elsen, R.

1997-01-01

The January 10-11, 1997 magnetic cloud event provided a rare opportunity to study auroral energy deposition under varying but intense IMF conditions. The Wind spacecraft located about 100 RE upstream monitored the IMF and plasma parameters during the passing of the cloud. The Polar Ultraviolet Imager (UVI) observed the aurora[ precipitation during the first encounter of the cloud with Earth's magnetosphere and during several subsequent substorm events. The UVI has the unique capability of measuring the energy flux and characteristic energy of the precipitating electrons through the use of narrow band filters that distinguish short and long wavelength molecular nitrogen emissions. The spatial and temporal characteristics of the precipitating electron energy will be discussed beginning with the inception of the event at the Earth early January 1 Oth and continuing through the subsidence of auroral activity on January 11th.

An operational methodology for riparian land cover fine scale regional mapping for the study of landscape influence on river ecological status

NASA Astrophysics Data System (ADS)

Tormos, T.; Kosuth, P.; Souchon, Y.; Villeneuve, B.; Durrieu, S.; Chandesris, A.

2010-12-01

Preservation and restoration of river ecosystems require an improved understanding of the mechanisms through which they are influenced by landscape at multiple spatial scales and particularly at river corridor scale considering the role of riparian vegetation for regulating and protecting river ecological status and the relevance of this specific area for implementing efficient and realistic strategies. Assessing correctly this influence over large river networks involves accurate broad scale (i.e. at least regional) information on Land Cover within Riparian Areas (LCRA). As the structure of land cover along rivers is generally not accessible using moderate-scale satellite imagery, finer spatial resolution imagery and specific mapping techniques are needed. For this purpose we developed a generic multi-scale Object Based Image Analysis (OBIA) scheme able to produce LCRA maps in different geographic context by exploiting information available from very high spatial resolution imagery (satellite or airborne) and/or metric to decametric spatial thematic data on a given study zone thanks to fuzzy expert knowledge classification rules. A first experimentation was carried out on the Herault river watershed (southern of France), a 2650 square kilometers basin that presents a contrasted landscape (different ecoregions) and a total stream length of 1150 Km, using high and very high multispectral remotely-sensed images (10m Spot5 multispectral images and 0.5m aerial photography) and existing spatial thematic data. Application of the OBIA scheme produced a detailed (22 classes) LCRA map with an overall accuracy of 89% and a Kappa index of 83% according to a land cover pressures typology (six categories). A second experimentation (using the same data sources) was carried out on a larger test zone, a part of the Normandy river network (25 000 square kilometers basin; 6000 km long river network; 155 ecological stations). This second work aimed at elaborating a robust statistical eco-regional model to study links between land cover spatial indicators calculated at local and watershed scales, and river ecological status assessed with macroinvertebrate indicators. Application of the OBIA scheme produced a detailed (62 classes) LCRA map which allowed the model to highlight influence of specific land use patterns: (i) the significant beneficial effect of 20-m riparian tree vegetation strip near a station and 20-m riparian grassland strip along the upstream network of a station and (ii) the negative impact on river ecological status of urban areas and roads on the upstream flood plain of a station. Results of these two experimentations highlight that (i) the application of an OBIA scheme using multi-source spatial data provides an efficient approach for mapping and monitoring LCRA that can be implemented operationally at regional or national scale and (ii) and the interest of using LCRA-maps derived from very high spatial resolution imagery (satellite or airborne) and/or metric spatial thematic data to study landscape influence on river ecological status and support managers in the definition of optimized riparian preservation and restoration strategies.

Soft repulsive mixtures under gravity: Brazil-nut effect, depletion bubbles, boundary layering, nonequilibrium shaking

NASA Astrophysics Data System (ADS)

Kruppa, Tobias; Neuhaus, Tim; Messina, René; Löwen, Hartmut

2012-04-01

A binary mixture of particles interacting via long-ranged repulsive forces is studied in gravity by computer simulation and theory. The more repulsive A-particles create a depletion zone of less repulsive B-particles around them reminiscent to a bubble. Applying Archimedes' principle effectively to this bubble, an A-particle can be lifted in a fluid background of B-particles. This "depletion bubble" mechanism explains and predicts a brazil-nut effect where the heavier A-particles float on top of the lighter B-particles. It also implies an effective attraction of an A-particle towards a hard container bottom wall which leads to boundary layering of A-particles. Additionally, we have studied a periodic inversion of gravity causing perpetuous mutual penetration of the mixture in a slit geometry. In this nonequilibrium case of time-dependent gravity, the boundary layering persists. Our results are based on computer simulations and density functional theory of a two-dimensional binary mixture of colloidal repulsive dipoles. The predicted effects also occur for other long-ranged repulsive interactions and in three spatial dimensions. They are therefore verifiable in settling experiments on dipolar or charged colloidal mixtures as well as in charged granulates and dusty plasmas.

Soft repulsive mixtures under gravity: brazil-nut effect, depletion bubbles, boundary layering, nonequilibrium shaking.

PubMed

Kruppa, Tobias; Neuhaus, Tim; Messina, René; Löwen, Hartmut

2012-04-07

A binary mixture of particles interacting via long-ranged repulsive forces is studied in gravity by computer simulation and theory. The more repulsive A-particles create a depletion zone of less repulsive B-particles around them reminiscent to a bubble. Applying Archimedes' principle effectively to this bubble, an A-particle can be lifted in a fluid background of B-particles. This "depletion bubble" mechanism explains and predicts a brazil-nut effect where the heavier A-particles float on top of the lighter B-particles. It also implies an effective attraction of an A-particle towards a hard container bottom wall which leads to boundary layering of A-particles. Additionally, we have studied a periodic inversion of gravity causing perpetuous mutual penetration of the mixture in a slit geometry. In this nonequilibrium case of time-dependent gravity, the boundary layering persists. Our results are based on computer simulations and density functional theory of a two-dimensional binary mixture of colloidal repulsive dipoles. The predicted effects also occur for other long-ranged repulsive interactions and in three spatial dimensions. They are therefore verifiable in settling experiments on dipolar or charged colloidal mixtures as well as in charged granulates and dusty plasmas.

Long-term trends in field level irrigation water demand in Mahanadi delta districts - a hydrological modeling approach for coping with climate change

NASA Astrophysics Data System (ADS)

Raju Pokkuluri, Venkat; Rao, Diwakar Parsi Guru; Hazra, Sugata; Srikant Kulkarni, Sunil

2017-04-01

India uses its 85 percent of available water resources for irrigation making it the country with largest net irrigated area in the world. With one of the largest delta plains, sustaining the needs of irrigation supplies is critical for food security and coping with challenges of climate change. The extensive development of upstream river basins/catchments is posing serious challenge and constrains to the water availability to delta regions, which depend on the controlled/regulated flows from the upstream catchments. The irrigation water demands vary due to changes in agricultural practices, cropping pattern and changing climate conditions. Estimation of realistic irrigation water demand and its trend over time is critical for meeting the supplementary water needs of productive agricultural lands in delta plains and there by coping the challenges of extensive upstream river basin development and climate change. The present study carried out in delta districts of Mahanadi river in Odisha State of India, wherein the long-term trends in field level irrigation water requirements were estimated, both on spatial & temporal scales, using hydrological modeling framework. This study attempts to estimate field level irrigation water requirements through simulation of soil water balance during the crop growing season through process based hydrological modeling framework. The soil water balance computations were carried out using FAO-56 framework, by modifying the crop coefficient (Kc) proportional to the water stress coefficient (Ks), which is a function of root zone depletion of water. Daily meteorological data, spatial cropping pattern, terrain are incorporated in the soil water balance simulation in the model. The irrigation water demand is derived considering the exclusion of soil water stress for each model time step. The field level irrigation water requirement at 8 day interval had been estimated for the each Rabi season (post-monsoon) spanning over 1986 to 2015. The results indicate that irrigation water requirements show spatial and temporal changes and tend to deviate from notional/envisaged demands. Validation of estimated irrigation demand is attempted through correlation of gap in supply and demand with the trends in crop water stress and crop production during the study years. Crop water Stress Index (CWSI), which is the ratio of deficit of actual evapotranspiration (AET) from the potential evapotranspiration (PET) and is derived from MODIS Evapotranspiration data. Agricultural production data is used from State/Central government statistics. The attempted methodology provides opportunities to estimate future irrigation water demand under projected climate change scenarios and for planning for basin level water resources development sustaining the delta agriculture, which are projected to be more vulnerable to climate change.

Characterization of eco-hydraulic habitats for examining biogeochemical processes in rivers

NASA Astrophysics Data System (ADS)

McPhillips, L. E.; O'Connor, B. L.; Harvey, J. W.

2009-12-01

Spatial variability in biogeochemical reaction rates in streams is often attributed to sediment characteristics such as particle size, organic material content, and biota attached to or embedded within the sediments. Also important in controlling biogeochemical reaction rates are hydraulic conditions, which influence mass transfer of reactants from the stream to the bed, as well as hyporheic exchange within near-surface sediments. This combination of physical and ecological variables has the potential to create habitats that are unique not only in sediment texture but also in their biogeochemical processes and metabolism rates. In this study, we examine the two-dimensional (2D) variability of these habitats in an agricultural river in central Iowa. The streambed substratum was assessed using a grid-based survey identifying dominant particle size classes, as well as aerial coverage of green algae, benthic organic material, and coarse woody debris. Hydraulic conditions were quantified using a calibrated 2D model, and hyporheic exchange was assessed using a scaling relationship based on sediment and hydraulic characteristics. Point-metabolism rates were inferred from measured sediment dissolved oxygen profiles using an effective diffusion model and compared to traditional whole-stream measurements of metabolism. The 185 m study reach had contrasting geomorphologic and hydraulic characteristics in the upstream and downstream portions of an otherwise relatively straight run of a meandering river. The upstream portion contained a large central gravel bar (50 m in length) flanked by riffle-run segments and the downstream portion contained a deeper, fairly uniform channel cross-section. While relatively high flow velocities and gravel sediments were characteristic of the study river, the upstream island bar separated channels that differed with sandy gravels on one side and cobbley gravels on the other. Additionally, green algae was almost exclusively found in riffle portions of the cobbley gravel channel sediments while fine benthic organic material was concentrated at channel margins, regardless of the underlying sediments. A high degree of spatial variability in hyporheic exchange potential was the result of the complex 2D nature of topography and hydraulics. However, sediment texture classifications did a reasonable job in characterizing variability in hyporheic exchange potential because sediment texture mapping incorporates qualitative aspects of bed shear stress and hydraulic conductivity that control hyporheic exchange. Together these variables greatly influenced point-metabolism measurements in different sediment texture habitats separated by only 1 to 2 m. Results from this study suggest that spatial variability and complex interactions between geomorphology, hydraulics, and biological communities generate eco-hydraulic habitats that control variability in biogeochemical processes. The processes controlling variability are highly two-dimensional in nature and are not often accounted for in traditional one-dimensional analysis approaches of biogeochemical processes.

Scalable Topic Modeling: Online Learning, Diagnostics, and Recommendation

DTIC Science & Technology

2017-03-01

Chinese restaurant processes. Journal of Machine Learning Research, 12:2461–2488, 2011. 15. L. Hannah, D. Blei and W. Powell. Dirichlet process mixtures of...34. S. Ghosh, A. Ungureanu, E. Sudderth, and D. Blei. A Spatial distance dependent Chinese restaurant process for image segmentation. In Neural

Determination of instream metal loads using tracer-injection and synoptic-sampling techniques in Wightman Fork, southwestern Colorado, September 1997

USGS Publications Warehouse

Ortiz, Roderick F.; Bencala, Kenneth E.

2001-01-01

Spatial determinations of the metal loads in Wightman Fork can be used to identify potential source areas to the stream. In September 1997, a chloride tracer-injection study was done concurrently with synoptic water-quality sampling in Wightman Fork near the Summitville Mine site. Discharge was determined and metal concentrations at 38 sites were used to generate mass-load profiles for dissolved aluminum, copper, iron, manganese, and zinc. The U.S. Environmental Protection Agency had previously identified these metals as contaminants of concern.Metal loads increased substantially in Wightman Fork near the Summitville Mine. A large increase occurred along a 60-meter reach that is north of the North Waste Dump and generally corresponds to a region of radial faults. Metal loading from this reach was equivalent to 50 percent or more of the dissolved aluminum, copper, iron, manganese, and zinc load upstream from the outfall of the Summitville Water Treatment Facility (SWTF). Overall, sources along the entire reach upstream from the SWTF were equivalent to 15 percent of the iron, 33 percent of the copper and manganese, 58 percent of the zinc, and 66 percent of the aluminum load leaving the mine site. The largest increases in metal loading to Wightman Fork occurred as a result of inflow from Cropsy Creek. Aluminum, iron, manganese, and zinc loads from Cropsy Creek were equivalent to about 40 percent of the specific metal load leaving the mine site. Copper, iron, and manganese loads from Cropsy Creek were nearly as large or larger than the load from sources upstream from the SWTF.

Influence of sediment storage on downstream delivery of contaminated sediment

USGS Publications Warehouse

Malmon, Daniel V.; Reneau, Steven L.; Dunne, Thomas; Katzman, Danny; Drakos, Paul G.

2005-01-01

Sediment storage in alluvial valleys can strongly modulate the downstream migration of sediment and associated contaminants through landscapes. Traditional methods for routing contaminated sediment through valleys focus on in‐channel sediment transport but ignore the influence of sediment exchanges with temporary sediment storage reservoirs outside the channel, such as floodplains. In theory, probabilistic analysis of particle trajectories through valleys offers a useful strategy for quantifying the influence of sediment storage on the downstream movement of contaminated sediment. This paper describes a field application and test of this theory, using 137Cs as a sediment tracer over 45 years (1952–1997), downstream of a historical effluent outfall at the Los Alamos National Laboratory (LANL), New Mexico. The theory is parameterized using a sediment budget based on field data and an estimate of the 137Cs release history at the upstream boundary. The uncalibrated model reasonably replicates the approximate magnitude and spatial distribution of channel‐ and floodplain‐stored 137Cs measured in an independent field study. Model runs quantify the role of sediment storage in the long‐term migration of a pulse of contaminated sediment, quantify the downstream impact of upstream mitigation, and mathematically decompose the future 137Cs flux near the LANL property boundary to evaluate the relative contributions of various upstream contaminant sources. The fate of many sediment‐bound contaminants is determined by the relative timescales of contaminant degradation and particle residence time in different types of sedimentary environments. The theory provides a viable approach for quantifying the long‐term movement of contaminated sediment through valleys.

Survival, growth, and movement of subadult humpback chub, Gila cypha, in the Little Colorado River, Arizona

USGS Publications Warehouse

Dzul, Maria C.; Yackulic, Charles B.; Stone, Dennis M.; Van Haverbeke, David R.

2016-01-01

Ecologists estimate vital rates, such as growth and survival, to better understand population dynamics and identify sensitive life history parameters for species or populations of concern. Here, we assess spatiotemporal variation in growth, movement, density, and survival of subadult humpback chub living in the Little Colorado River, Grand Canyon, AZ from 2001–2002 and 2009–2013. We divided the Little Colorado River into three reaches and used a multistate mark-recapture model to determine rates of movement and differences in survival and density between sites for different cohorts. Additionally, site-specific and year-specific effects on growth were evaluated using a linear model. Results indicate that summer growth was higher for upstream sites compared with downstream sites. In contrast, there was not a consistent spatial pattern across years in winter growth; however, river-wide winter growth was negatively related to the duration of floods from 1 October to 15 May. Apparent survival was estimated to be lower at the most downstream site compared with the upstream sites; however, this could be because in part of increased emigration into the Colorado River at downstream sites. Furthermore, the 2010 cohort (i.e. fish that are age 1 in 2010) exhibited high apparent survival relative to other years. Movement between reaches varied with year, and some years exhibited preferential upstream displacement. Improving understanding of spatiotemporal effects on age 1 humpback chub survival can help inform current management efforts to translocate humpback chub into new locations and give us a better understanding of the factors that may limit this tributary's carrying capacity for humpback chub.

A novel principal component analysis for spatially misaligned multivariate air pollution data.

PubMed

Jandarov, Roman A; Sheppard, Lianne A; Sampson, Paul D; Szpiro, Adam A

2017-01-01

We propose novel methods for predictive (sparse) PCA with spatially misaligned data. These methods identify principal component loading vectors that explain as much variability in the observed data as possible, while also ensuring the corresponding principal component scores can be predicted accurately by means of spatial statistics at locations where air pollution measurements are not available. This will make it possible to identify important mixtures of air pollutants and to quantify their health effects in cohort studies, where currently available methods cannot be used. We demonstrate the utility of predictive (sparse) PCA in simulated data and apply the approach to annual averages of particulate matter speciation data from national Environmental Protection Agency (EPA) regulatory monitors.

A spatial scaling relationship for soil moisture in a semiarid landscape, using spatial scaling relationships for pedology

NASA Astrophysics Data System (ADS)

Willgoose, G. R.; Chen, M.; Cohen, S.; Saco, P. M.; Hancock, G. R.

2013-12-01

In humid areas it is generally considered that soil moisture scales spatially according to the wetness index of the landscape. This scaling arises from lateral flow downslope of ground water within the soil zone. However, in semi-arid and drier regions, this lateral flow is small and fluxes are dominated by vertical flows driven by infiltration and evapotranspiration. Thus, in the absence of runon processes, soil moisture at a location is more driven by local factors such as soil and vegetation properties at that location rather than upstream processes draining to that point. The 'apparent' spatial randomness of soil and vegetation properties generally suggests that soil moisture for semi-arid regions is spatially random. In this presentation a new analysis of neutron probe data during summer from the Tarrawarra site near Melbourne, Australia shows persistent spatial organisation of soil moisture over several years. This suggests a link between permanent features of the catchment (e.g. soil properties) and soil moisture distribution, even though the spatial pattern of soil moisture during the 4 summers monitored appears spatially random. This and other data establishes a prima facie case that soil variations drive spatial variation in soil moisture. Accordingly, we used a previously published spatial scaling relationship for soil properties derived using the mARM pedogenesis model to simulate the spatial variation of soil grading. This soil grading distribution was used in the Rosetta pedotransfer model to derive a spatial distribution of soil functional properties (e.g. saturated hydraulic conductivity, porosity). These functional properties were then input into the HYDRUS-1D soil moisture model and soil moisture simulated for 3 years at daily resolution. The HYDRUS model used had previously been calibrated to field observed soil moisture data at our SASMAS field site. The scaling behaviour of soil moisture derived from this modelling will be discussed and compared with observed data from our SASMAS field sites.

Shock-initiated Combustion of a Spherical Density Inhomogeneity

NASA Astrophysics Data System (ADS)

Haehn, Nicholas; Oakley, Jason; Rothamer, David; Anderson, Mark; Ranjan, Devesh; Bonazza, Riccardo

2010-11-01

A spherical density inhomogeneity is prepared using fuel and oxidizer at a stoichiometric ratio and Xe as a diluent that increases the overall density of the bubble mixture (55% Xe, 30% H2, 15% O2). The experiments are performed in the Wisconsin Shock Tube Laboratory in a 9.2 m vertical shock tube with a 25.4 cm x 25.4 cm square cross-section. An injector is used to generate a 5 cm diameter soap film bubble filled with the combustible mixture. The injector retracts flush into the side of the tube releasing the bubble into a state of free fall. The combustible bubble is accelerated by a planar shock wave in N2 (2.0 < M < 2.8). The mismatch of acoustic impedances results in shock-focusing at the downstream pole of the bubble. The shock focusing results in localized temperatures and pressures significantly larger than nominal conditions behind a planar shock wave, resulting in auto-ignition at the focus. Planar Mie scattering and chemiluminescence are used simultaneously to visualize the bubble morphology and combustion characteristics. During the combustion phase, both the span-wise and stream-wise lengths of the bubble are seen to increase compared to the non-combustible scenario. Additionally, smaller instabilities are observed on the upstream surface, which are absent in the non-combustible bubbles.

A two-stage combined trickle bed reactor/biofilter for treatment of styrene/acetone vapor mixtures.

PubMed

Vanek, Tomas; Halecky, Martin; Paca, Jan; Zapotocky, Lubos; Gelbicova, Tereza; Vadkertiova, Renata; Kozliak, Evguenii; Jones, Kim

2015-01-01

Performance of a two-stage biofiltration system was investigated for removal of styrene-acetone mixtures. High steady-state acetone loadings (above C(in)(Ac) = 0.5 g.m(-3) corresponding to the loadings > 34.5 g.m(-3).h(-1)) resulted in a significant inhibition of the system's performance in both acetone and styrene removal. This inhibition was shown to result from the acetone accumulation within the upstream trickle-bed bioreactor (TBR) circulating mineral medium, which was observed by direct chromatographic measurements. Placing a biofilter (BF) downstream to this TBR overcomes the inhibition as long as the biofilter has a sufficient bed height. A different kind of inhibition of styrene biodegradation was observed within the biofilter at very high acetone loadings (above C(in)(Ac) = 1.1 g.m(-3) or 76 g.m(-3).h(-1) loading). In addition to steady-state measurements, dynamic tests confirmed that the reactor overloading can be readily overcome, once the accumulated acetone in the TBR fluids is degraded. No sizable metabolite accumulation in the medium was observed for either TBR or BF. Analyses of the biodegradation activities of microbial isolates from the biofilm corroborated the trends observed for the two-stage biofiltration system, particularly the occurrence of an inhibition threshold by excess acetone.

A multimodal imaging workflow to visualize metal mixtures in the human placenta and explore colocalization with biological response markers.

PubMed

Niedzwiecki, Megan M; Austin, Christine; Remark, Romain; Merad, Miriam; Gnjatic, Sacha; Estrada-Gutierrez, Guadalupe; Espejel-Nuñez, Aurora; Borboa-Olivares, Hector; Guzman-Huerta, Mario; Wright, Rosalind J; Wright, Robert O; Arora, Manish

2016-04-01

Fetal exposure to essential and toxic metals can influence life-long health trajectories. The placenta regulates chemical transmission from maternal circulation to the fetus and itself exhibits a complex response to environmental stressors. The placenta can thus be a useful matrix to monitor metal exposures and stress responses in utero, but strategies to explore the biologic effects of metal mixtures in this organ are not well-developed. In this proof-of-concept study, we used laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) to measure the distributions of multiple metals in placental tissue from a low-birth-weight pregnancy, and we developed an approach to identify the components of metal mixtures that colocalized with biological response markers. Our novel workflow, which includes custom-developed software tools and algorithms for spatial outlier identification and background subtraction in multidimensional elemental image stacks, enables rapid image processing and seamless integration of data from elemental imaging and immunohistochemistry. Using quantitative spatial statistics, we identified distinct patterns of metal accumulation at sites of inflammation. Broadly, our multiplexed approach can be used to explore the mechanisms mediating complex metal exposures and biologic responses within placentae and other tissue types. Our LA-ICP-MS image processing workflow can be accessed through our interactive R Shiny application 'shinyImaging', which is available at or through our laboratory's website, .

FCS diffusion laws in two-phase lipid membranes: determination of domain mean size by experiments and Monte Carlo simulations.

PubMed

Favard, Cyril; Wenger, Jérôme; Lenne, Pierre-François; Rigneault, Hervé

2011-03-02

Many efforts have been undertaken over the last few decades to characterize the diffusion process in model and cellular lipid membranes. One of the techniques developed for this purpose, fluorescence correlation spectroscopy (FCS), has proved to be a very efficient approach, especially if the analysis is extended to measurements on different spatial scales (referred to as FCS diffusion laws). In this work, we examine the relevance of FCS diffusion laws for probing the behavior of a pure lipid and a lipid mixture at temperatures below, within and above the phase transitions, both experimentally and numerically. The accuracy of the microscopic description of the lipid mixtures found here extends previous work to a more complex model in which the geometry is unknown and the molecular motion is driven only by the thermodynamic parameters of the system itself. For multilamellar vesicles of both pure lipid and lipid mixtures, the FCS diffusion laws recorded at different temperatures exhibit large deviations from pure Brownian motion and reveal the existence of nanodomains. The variation of the mean size of these domains with temperature is in perfect correlation with the enthalpy fluctuation. This study highlights the advantages of using FCS diffusion laws in complex lipid systems to describe their temporal and spatial structure. Copyright © 2011 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Large-scale monitoring of shorebird populations using count data and N-mixture models: Black Oystercatcher (Haematopus bachmani) surveys by land and sea

USGS Publications Warehouse

Lyons, James E.; Andrew, Royle J.; Thomas, Susan M.; Elliott-Smith, Elise; Evenson, Joseph R.; Kelly, Elizabeth G.; Milner, Ruth L.; Nysewander, David R.; Andres, Brad A.

2012-01-01

Large-scale monitoring of bird populations is often based on count data collected across spatial scales that may include multiple physiographic regions and habitat types. Monitoring at large spatial scales may require multiple survey platforms (e.g., from boats and land when monitoring coastal species) and multiple survey methods. It becomes especially important to explicitly account for detection probability when analyzing count data that have been collected using multiple survey platforms or methods. We evaluated a new analytical framework, N-mixture models, to estimate actual abundance while accounting for multiple detection biases. During May 2006, we made repeated counts of Black Oystercatchers (Haematopus bachmani) from boats in the Puget Sound area of Washington (n = 55 sites) and from land along the coast of Oregon (n = 56 sites). We used a Bayesian analysis of N-mixture models to (1) assess detection probability as a function of environmental and survey covariates and (2) estimate total Black Oystercatcher abundance during the breeding season in the two regions. Probability of detecting individuals during boat-based surveys was 0.75 (95% credible interval: 0.42–0.91) and was not influenced by tidal stage. Detection probability from surveys conducted on foot was 0.68 (0.39–0.90); the latter was not influenced by fog, wind, or number of observers but was ~35% lower during rain. The estimated population size was 321 birds (262–511) in Washington and 311 (276–382) in Oregon. N-mixture models provide a flexible framework for modeling count data and covariates in large-scale bird monitoring programs designed to understand population change.

A Modified Relative Spectral Mixture Analysis to Extract the Fractions of Major Land Cover Components

NASA Astrophysics Data System (ADS)

Jia, S.

2015-12-01

As an effective method of extracting land cover fractions based on spectral endmembers, spectral mixture analysis (SMA) has been applied using remotely sensed imagery in different spatial, temporal, and spectral resolutions. A number of studies focused on arid/semiarid ecosystem have used SMA to obtain the land cover fractions of GV, NPV/litter, and bare soil (BS) using MODIS reflectance products to understand ecosystem phenology, track vegetation dynamics, and evaluate the impact of major disturbances. However, several challenges remain in the application of SMA in studying ecosystem phenology, including obtaining high quality endmembers and increasing computational efficiency when considering to long time series that cover a broad spatial extent. Okin (2007) proposes a variation of SMA, named as relative spectra mixture analysis (RSMA) to address the latter challenge by calculating the relative change of fraction of GV, NPV/litter, and BS compared with a baseline date. This approach assumes that the baseline image contains the spectral information of the bare soil that can be used as an endmember for spectral mixture analysis though it is mixed with the spectral reflectance of other non-soil land cover types. Using the baseline image, one can obtain the change of fractions of GV, NPV/litter, BS, and snow compared with the baseline image. However, RSMA results depend on the selection of baseline date and the fractional components during this date. In this study, we modified the strategy of implementing RSMA by introducing a step of obtaining a soil map as the baseline image using multiple-endmember SMA (MESMA) before applying RSMA. The fractions of land cover components from this modified RSMA are also validated using the field observations from two study area in semiarid savanna and grassland of Queensland, Australia.

[Estimation of Hunan forest carbon density based on spectral mixture analysis of MODIS data].

PubMed

Yan, En-ping; Lin, Hui; Wang, Guang-xing; Chen, Zhen-xiong

2015-11-01

With the fast development of remote sensing technology, combining forest inventory sample plot data and remotely sensed images has become a widely used method to map forest carbon density. However, the existence of mixed pixels often impedes the improvement of forest carbon density mapping, especially when low spatial resolution images such as MODIS are used. In this study, MODIS images and national forest inventory sample plot data were used to conduct the study of estimation for forest carbon density. Linear spectral mixture analysis with and without constraint, and nonlinear spectral mixture analysis were compared to derive the fractions of different land use and land cover (LULC) types. Then sequential Gaussian co-simulation algorithm with and without the fraction images from spectral mixture analyses were employed to estimate forest carbon density of Hunan Province. Results showed that 1) Linear spectral mixture analysis with constraint, leading to a mean RMSE of 0.002, more accurately estimated the fractions of LULC types than linear spectral and nonlinear spectral mixture analyses; 2) Integrating spectral mixture analysis model and sequential Gaussian co-simulation algorithm increased the estimation accuracy of forest carbon density to 81.5% from 74.1%, and decreased the RMSE to 5.18 from 7.26; and 3) The mean value of forest carbon density for the province was 30.06 t · hm(-2), ranging from 0.00 to 67.35 t · hm(-2). This implied that the spectral mixture analysis provided a great potential to increase the estimation accuracy of forest carbon density on regional and global level.

The Irma-sponge Program: Methodologies For Sustainable Flood Risk Management Along The Rhine and Meuse Rivers

NASA Astrophysics Data System (ADS)

Hooijer, A.; van Os, A. G.

Recent flood events and socio-economic developments have increased the awareness of the need for improved flood risk management along the Rhine and Meuse Rivers. In response to this, the IRMA-SPONGE program incorporated 13 research projects in which over 30 organisations from all 6 River Basin Countries co-operated. The pro- gram is financed partly by the European INTERREG Rhine-Meuse Activities (IRMA). The main aim of IRMA-SPONGE is defined as: "The development of methodologies and tools to assess the impact of flood risk reduction measures and of land-use and climate change scenarios. This to support the spatial planning process in establish- ing alternative strategies for an optimal realisation of the hydraulic, economical and ecological functions of the Rhine and Meuse River Basins." Further important objec- tives are to promote transboundary co-operation in flood risk management by both scientific and management organisations, and to promote public participation in flood management issues. The projects in the program are grouped in three clusters, looking at measures from different scientific angles. The results of the projects in each cluster have been evaluated to define recommendations for flood risk management; some of these outcomes call for a change to current practices, e.g.: 1. (Flood Risk and Hydrol- ogy cluster): hydrological changes due to climate change exceed those due to further land use change, and are significant enough to necessitate a change in flood risk man- agement strategies if the currently claimed protection levels are to be sustained. 2. (Flood Protection and Ecology cluster): to not only provide flood protection but also enhance the ecological quality of rivers and floodplains, new flood risk management concepts ought to integrate ecological knowledge from start to finish, with a clear perspective on the type of nature desired and the spatial and time scales considered. 3. (Flood Risk Management and Spatial Planning cluster): extreme floods can not be prevented by taking mainly upstream measures; significant and space-consuming lo- cal measures will therefore be needed in the lower Rhine and Meuse deltas. However, there is also a need for improved flood risk management upstream, which calls for better spatial planning procedures. More detailed information on the IRMA-SPONGE program can be found on our website: www.irma-sponge.org.

Spatial gradients in stream power and the implications for lateral and downstream transport of material during the 2013 Floods in Colorado and 2011 Irene Floods in Vermont, USA

NASA Astrophysics Data System (ADS)

Gartner, J. D.; Renshaw, C. E.; Magilligan, F. J.; Buraas, E. M.; Dethier, E.; Dade, W. B.

2014-12-01

Classic approaches to understand sediment transport and channel-hillslope coupling focus on magnitudes of forces at a point location or reach. Yet often overlooked are downstream gradients in forces along a river. Here we show a physical rationale supported by field evidence that downstream spatial gradients in sediment transport capacity affect lateral exchange of material in the form of landslides, bank failures and floodplain deposition. Taking advantage of the strong signals of near-channel deposition and erosion during the record-high 2011 Irene floods in Vermont and 2013 floods in Colorado, USA, we test if these spatial gradients can predict geomorphic response in flood events. Total stream power, an indicator of total sediment transport capacity, was mapped using GIS analysis along the Saxtons River (190 km2) and West Branch of White River (112 km2) in Vermont and Fourmile Creek (20 km2) and an unnamed creek on Mt Sanitas (7 km2) in Boulder, CO. These mountainous streams exhibit reach slopes of 0.5 to > 10%, with less steep reaches interspersed among steeper reaches. Near-channel erosion and deposition were quantified along 52 river km by pre/post satellite imagery, field surveys, and, when available, differencing of pre/post topography measured by aerial LiDAR. Zones of abundant mass wasting inputs—up to 11,000 m3 per km—were generally distinct from zones of abundant floodplain deposition—up to 30,000 m3 per km. Spatial patterns indicate that zones of abundant mass wasting into the channels align approximately with zones of down-flow increasing stream power. These reaches can convey material delivered from upstream plus additional lateral inputs of sediment. Conversely, reaches of abundant lateral flux out of the channel via near-channel deposition occur predominantly where mapped total stream power declines in the down-flow direction. These reaches appear unable to convey material supplied from upstream, which induces lateral deposition. The demonstrated interaction between downstream and lateral fluxes of material provides insight on physical controls on broad-scale geomorphic processes at channel margins as well as the sources and fates of matter transported by rivers, with implications for flood recovery and long-term river management.

Effect of Alnus glutinosa on hybrid populus growth and soil nitrogen concentration in a mixed plantation

Treesearch

Jeffrey O. Dawson; Edward A. Hansen

1983-01-01

Height growth of hybrid Populusand soil nitrogen concentration around Alnus glutinosa stems differed significantly both spatially and with the Alnus/Populus mixture in a short-rotation intensively cultured mixed planting. Populus height growth comparable to that obtained from optimal rates of...

On the Utilization of Ice Flow Models and Uncertainty Quantification to Interpret the Impact of Surface Radiation Budget Errors on Estimates of Greenland Ice Sheet Surface Mass Balance and Regional Estimates of Mass Balance

NASA Astrophysics Data System (ADS)

Schlegel, N.; Larour, E. Y.; Gardner, A. S.; Lang, C.; Miller, C. E.; van den Broeke, M. R.

2016-12-01

How Greenland ice flow may respond to future increases in surface runoff and to increases in the frequency of extreme melt events is unclear, as it requires detailed comprehension of Greenland surface climate and the ice sheet's sensitivity to associated uncertainties. With established uncertainty quantification tools run within the framework of Ice Sheet System Model (ISSM), we conduct decadal-scale forward modeling experiments to 1) quantify the spatial resolution needed to effectively force distinct components of the surface radiation budget, and subsequently surface mass balance (SMB), in various regions of the ice sheet and 2) determine the dynamic response of Greenland ice flow to variations in components of the net radiation budget. The Glacier Energy and Mass Balance (GEMB) software is a column surface model (1-D) that has recently been embedded as a module within ISSM. Using the ISSM-GEMB framework, we perform sensitivity analyses to determine how perturbations in various components of the surface radiation budget affect model output; these model experiments allow us predict where and on what spatial scale the ice sheet is likely to dynamically respond to changes in these parameters. Preliminary results suggest that SMB should be forced at at least a resolution of 23 km to properly capture dynamic ice response. In addition, Monte-Carlo style sampling analyses reveals that the areas with the largest uncertainty in mass flux are located near the equilibrium line altitude (ELA), upstream of major outlet glaciers in the North and West of the ice sheet. Sensitivity analysis indicates that these areas are also the most vulnerable on the ice sheet to persistent, far-field shifts in SMB, suggesting that continued warming, and upstream shift in the ELA, are likely to result in increased velocities, and consequentially SMB-induced thinning upstream of major outlet glaciers. Here, we extend our investigation to consider various components of the surface radiation budget separately, in order to determine how and where errors in these fields may independently impact ice flow. This work was performed at the California Institute of Technology's Jet Propulsion Laboratory under a contract with the National Aeronautics and Space Administration's Cryosphere and Interdisciplinary Research in Earth Science Programs.

Integration of fluvial erosion factors for predicting landslides along meandering rivers

NASA Astrophysics Data System (ADS)

Chen, Yi-chin; Chang, Kang-tsung; Ho, Jui-yi

2015-04-01

River incision and lateral erosion are important geomorphologic processes in mountainous areas of Taiwan. During a typhoon or storm event, the increase of water discharge, flow velocity, and sediment discharge enhances the power of river erosion on channel bank. After the materials on toe of hillslope were removed by river erosion, landslides were triggered at outer meander bends. Although it has been long expected that river erosion can trigger landslide, studies quantifying the effects of river erosion on landslide and the application of river erosion index in landslide prediction are still overlooked. In this study, we investigated the effect of river erosion on landslide in a particular meanders landscape of the Jhoukou River, southern Taiwan. We developed a semi-automatic model to separate meandering lines into several reach segments based on the inflection points and to calculate river erosion indexes, e.g. sinuosity of meander, stream power, and stream order, for each reach segment. This model, then, built the spatial relationship between the reaches and its corresponding hillslopes, of which the toe was eroded by the reach. Based on the spatial relationship, we quantified the correlations between these indexes and landslides triggered by Typhoon Morakot in 2009 to examine the effects of river erosion on landslide. The correlated indexes were then used as landslide predictors in logistic regression model. Results of the study showed that there is no significant correlation between landslide density and meander sinuosity. This may be a result of wider channel dispersing the erosion at a meandering reach. On the other hand, landslide density at concave bank is significantly higher than that at convex bank in the downstream (stream order > 3), but that is almost the same in the upstream (stream order < 3). This may imply that river sediment play different roles between down- and upstream segments. River sediment in the upstream is an erosion agent vertically scouring the river bed, resulting in a symmetrical effect on both concave and convex bank. In contrast, river sediment in the downstream is an erosion agent eroding the concave bank laterally, but also depositing on the concave side and protecting the bank from erosion. Finally, the results also showed that the integration of fluvial erosion factors can improve the performance in predicting landsliding along meandering rivers.

High porewater exchange in a mangrove-dominated estuary revealed from short-lived radium isotopes

NASA Astrophysics Data System (ADS)

Sadat-Noori, Mahmood; Santos, Isaac R.; Tait, Douglas R.; Reading, Michael J.; Sanders, Christian J.

2017-10-01

We hypothesise that mangroves play an important role in groundwater exchange processes in sub-tropical and tropical estuarine waters. To investigate this, multiple high resolution time series measurements of radium across a tidal estuary (Coffs Creek, NSW, Australia) were performed as well as a spatial survey in both bottom and surface layers. Results from the spatial survey revealed increasing radium concentrations in parts of the estuary surrounded by mangroves. The average radium concentration in estuary areas lined with mangroves was 2.5 times higher than the average concentration at the mouth of the estuary and 6.5-fold higher than upstream freshwater areas. Additionally, the area enriched in radium coincided with low dissolved oxygen concentrations, implying that porewater exchange may drive anoxia. A radium mass balance model based on 223Ra and 224Ra isotopes at different sections of the estuary confirmed higher porewater exchange rates from areas fringed with mangrove vegetation. Estimated porewater exchange rates were 27.8 ± 5.3 and 13.6 ± 2.1 cm d-1 (0.8 ± 0.1 and 0.4 ± 0.1 m3 s-1) based on 223Ra and 224Ra isotopes, respectively. The average saline porewater exchange was ∼ 10-fold larger than the upstream surface freshwater inputs to the estuary. We suggest that mangrove environments within subtropical estuaries are hotspots for porewater exchange due to the complex belowground structure of crab burrows and the effect of tidal pumping. Because porewater exchange releases carbon and nitrogen from coastal sediments, development and modification of mangrove areas in subtropical estuaries have a significant effect on coastal biogeochemical cycles.

Coupling GIS and multivariate approaches to reference site selection for wadeable stream monitoring.

PubMed

Collier, Kevin J; Haigh, Andy; Kelly, Johlene

2007-04-01

Geographic Information System (GIS) was used to identify potential reference sites for wadeable stream monitoring, and multivariate analyses were applied to test whether invertebrate communities reflected a priori spatial and stream type classifications. We identified potential reference sites in segments with unmodified vegetation cover adjacent to the stream and in >85% of the upstream catchment. We then used various landcover, amenity and environmental impact databases to eliminate sites that had potential anthropogenic influences upstream and that fell into a range of access classes. Each site identified by this process was coded by four dominant stream classes and seven zones, and 119 candidate sites were randomly selected for follow-up assessment. This process yielded 16 sites conforming to reference site criteria using a conditional-probabilistic design, and these were augmented by an additional 14 existing or special interest reference sites. Non-metric multidimensional scaling (NMS) analysis of percent abundance invertebrate data indicated significant differences in community composition among some of the zones and stream classes identified a priori providing qualified support for this framework in reference site selection. NMS analysis of a range standardised condition and diversity metrics derived from the invertebrate data indicated a core set of 26 closely related sites, and four outliers that were considered atypical of reference site conditions and subsequently dropped from the network. Use of GIS linked to stream typology, available spatial databases and aerial photography greatly enhanced the objectivity and efficiency of reference site selection. The multi-metric ordination approach reduced variability among stream types and bias associated with non-random site selection, and provided an effective way to identify representative reference sites.

Riparian influences on stream fish assemblage structure in urbanizing streams

USGS Publications Warehouse

Roy, A.H.; Freeman, B.J.; Freeman, Mary C.

2007-01-01

We assessed the influence of land cover at multiple spatial extents on fish assemblage integrity, and the degree to which riparian forests can mitigate the negative effects of catchment urbanization on stream fish assemblages. Riparian cover (urban, forest, and agriculture) was determined within 30 m buffers at longitudinal distances of 200 m, 1 km, and the entire network upstream of 59 non-nested fish sampling locations. Catchment and riparian land cover within the upstream network were highly correlated, so we were unable to distinguish between those variables. Most fish assemblage variables were related to % forest and % urban land cover, with the strongest relations at the largest spatial extent of land cover (catchment), followed by riparian land cover in the 1-km and 200-m reach, respectively. For fish variables related to urban land cover in the catchment, we asked whether the influence of riparian land cover on fish assemblages was dependent on the amount of urban development in the catchment. Several fish assemblage metrics (endemic richness, endemic:cosmopolitan abundance, insectivorous cyprinid richness and abundance, and fluvial specialist richness) were all best predicted by single variable models with % urban land cover. However, endemic:cosmopolitan richness, cosmopolitan abundance, and lentic tolerant abundance were related to % forest cover in the 1-km stream reach, but only in streams that had <15% catchment urban land cover. In these cases, catchment urbanization overwhelmed the potential mitigating effects of riparian forests on stream fishes. Together, these results suggest that catchment land cover is an important driver of fish assemblages in urbanizing catchments, and riparian forests are important but not sufficient for protecting stream ecosystems from the impacts of high levels of urbanization.

Channelization and floodplain forests: Impacts of accelerated sedimentation and valley plug formation on floodplain forests of the Middle Fork Forked Deer River, Tennessee, USA

USGS Publications Warehouse

Oswalt, S.N.; King, S.L.

2005-01-01

We evaluated the severe degradation of floodplain habitats resulting from channelization and concomitant excessive coarse sedimentation on the Middle Fork Forked Deer River in west Tennessee from 2000 to 2003. Land use practices have resulted in excessive sediment in the tributaries and river system eventually resulting in sand deposition on the floodplain, increased overbank flooding, a rise in the groundwater table, and ponding of upstream timber. Our objectives were to: (1) determine the composition of floodplain vegetation communities along the degraded river reach, (2) to isolate relationships among these communities, geomorphic features, and environmental variables and (3) evaluate successional changes based on current stand conditions. Vegetation communities were not specifically associated with predefined geomorphic features; nevertheless, hydrologic and geomorphic processes as a result of channelization have clearly affected vegetation communities. The presence of valley plugs and continued degradation of upstream reaches and tributaries on the impacted study reach has arrested recovery of floodplain plant communities. Historically common species like Liquidambar styraciflua L. and Quercus spp. L. were not important, with importance values (IV) less than 1, and occurred in less than 20% of forested plots, while Acer rubrum L., a disturbance-tolerant species, was the most important species on the site (IV = 78.1) and occurred in 87% of forested plots. The results of this study also indicate that channelization impacts on the Middle Fork Forked Deer River are more temporally and spatially complex than previously described for other river systems. Rehabilitation of this system necessitates a long-term, landscape-scale solution that addresses watershed rehabilitation in a spatially and temporally hierarchical manner. ?? 2005 Elsevier B.V. All rights reserved.

Spatiotemporal variation of Van der Burgh's coefficient in a salt plug estuary

NASA Astrophysics Data System (ADS)

Shaha, Dinesh Chandra; Cho, Yang-Ki; Kim, Bong Guk; Rafi Afruz Sony, M.; Rani Kundu, Sampa; Faruqul Islam, M.

2017-09-01

Salt water intrusion in estuaries is expected to become a serious global issue due to climate change. Van der Burgh's coefficient, K, is a good proxy for describing the relative contribution of tide-driven and gravitational (discharge-driven and density-driven) components of salt transport in estuaries. However, debate continues over the use of the K value for an estuary where K should be a constant, spatially varying, or time-independent factor for different river discharge conditions. In this study, we determined K during spring and neap tides in the dry (< 30 m-3 s-1) and wet (> 750 m-3 s-1) seasons in a salt plug estuary with an exponentially varying width and depth, to examine the relative contributions of tidal versus density-driven salt transport mechanisms. High-resolution salinity data were used to determine K. Discharge-driven gravitational circulation (K ˜ 0.8) was entirely dominant over tidal dispersion during spring and neap tides in the wet season, to the extent that salt transport upstream was effectively reduced, resulting in the estuary remaining in a relatively fresh state. In contrast, K increased gradually seaward (K ˜ 0.74) and landward (K ˜ 0.74) from the salt plug area (K ˜ 0.65) during the dry season, similar to an inverse and positive estuary, respectively. As a result, density-driven inverse gravitational circulation between the salt plug and the sea facilitates inverse estuarine circulation. On the other hand, positive estuarine circulation between the salt plug and the river arose due to density-driven positive gravitational circulation during the dry season, causing the upstream intrusion of high-salinity bottom water. Our results explicitly show that K varies spatially and depends on the river discharge. This result provides a better understanding of the distribution of hydrographic properties.

LOX/hydrocarbon fuel carbon formation and mixing data analysis

NASA Technical Reports Server (NTRS)

Fang, J.

1983-01-01

By applying the Priem-Heidmann Generalized-Length vaporization correlation, the computer model developed by the present study predicts the spatial variation of propellant vaporization rate using the injector cold flow results to define the streamtubes. The calculations show that the overall and local propellant vaporization rate and mixture ratio change drastically as the injection element type or the injector operating condition is changed. These results are compared with the regions of carbon formation observed in the photographic combustion testing. The correlation shows that the fuel vaporization rate and the local mixture ratio produced by the injector element have first order effects on the degree of carbon formation.

Aircraft target detection algorithm based on high resolution spaceborne SAR imagery

NASA Astrophysics Data System (ADS)

Zhang, Hui; Hao, Mengxi; Zhang, Cong; Su, Xiaojing

2018-03-01

In this paper, an image classification algorithm for airport area is proposed, which based on the statistical features of synthetic aperture radar (SAR) images and the spatial information of pixels. The algorithm combines Gamma mixture model and MRF. The algorithm using Gamma mixture model to obtain the initial classification result. Pixel space correlation based on the classification results are optimized by the MRF technique. Additionally, morphology methods are employed to extract airport (ROI) region where the suspected aircraft target samples are clarified to reduce the false alarm and increase the detection performance. Finally, this paper presents the plane target detection, which have been verified by simulation test.

A Raman chemical imaging system for detection of contaminants in food

NASA Astrophysics Data System (ADS)

Chao, Kaunglin; Qin, Jianwei; Kim, Moon S.; Mo, Chang Yeon

2011-06-01

This study presented a preliminary investigation into the use of macro-scale Raman chemical imaging for the screening of dry milk powder for the presence of chemical contaminants. Melamine was mixed into dry milk at concentrations (w/w) of 0.2%, 0.5%, 1.0%, 2.0%, 5.0%, and 10.0% and images of the mixtures were analyzed by a spectral information divergence algorithm. Ammonium sulfate, dicyandiamide, and urea were each separately mixed into dry milk at concentrations of (w/w) of 0.5%, 1.0%, and 5.0%, and an algorithm based on self-modeling mixture analysis was applied to these sample images. The contaminants were successfully detected and the spatial distribution of the contaminants within the sample mixtures was visualized using these algorithms. Although further studies are necessary, macro-scale Raman chemical imaging shows promise for use in detecting contaminants in food ingredients and may also be useful for authentication of food ingredients.

Motions of the hand expose the partial and parallel activation of stereotypes.

PubMed

Freeman, Jonathan B; Ambady, Nalini

2009-10-01

Perceivers spontaneously sort other people's faces into social categories and activate the stereotype knowledge associated with those categories. In the work described here, participants, presented with sex-typical and sex-atypical faces (i.e., faces containing a mixture of male and female features), identified which of two gender stereotypes (one masculine and one feminine) was appropriate for the face. Meanwhile, their hand movements were measured by recording the streaming x, y coordinates of the computer mouse. As participants stereotyped sex-atypical faces, real-time motor responses exhibited a continuous spatial attraction toward the opposite-gender stereotype. These data provide evidence for the partial and parallel activation of stereotypes belonging to alternate social categories. Thus, perceptual cues of the face can trigger a graded mixture of simultaneously active stereotype knowledge tied to alternate social categories, and this mixture settles over time onto ultimate judgments.

On-chip ultra-thin layer chromatography and surface enhanced Raman spectroscopy.

PubMed

Chen, Jing; Abell, Justin; Huang, Yao-wen; Zhao, Yiping

2012-09-07

We demonstrate that silver nanorod (AgNR) array substrates can be used for on-chip separation and detection of chemical mixtures by combining ultra-thin layer chromatography (UTLC) and surface enhanced Raman spectroscopy (SERS). The UTLC-SERS plate consists of an AgNR array fabricated by oblique angle deposition. The capability of the AgNR substrates to separate the different compounds in a mixture was explored using a mixture of four dyes and a mixture of melamine and Rhodamine 6G at varied concentrations with different mobile phase solvents. After UTLC separation, spatially-resolved SERS spectra were collected along the mobile phase development direction and the intensities of specific SERS peaks from each component were used to generate chromatograms. The AgNR substrates demonstrate the potential for separating the test dyes with plate heights as low as 9.6 μm. The limits of detection are between 10(-5)-10(-6) M. Furthermore, we show that the coupling of UTLC with SERS improves the SERS detection specificity, as small amounts of target analytes can be separated from the interfering background components.

Computational Aspects of N-Mixture Models

PubMed Central

Dennis, Emily B; Morgan, Byron JT; Ridout, Martin S

2015-01-01

The N-mixture model is widely used to estimate the abundance of a population in the presence of unknown detection probability from only a set of counts subject to spatial and temporal replication (Royle, 2004, Biometrics 60, 105–115). We explain and exploit the equivalence of N-mixture and multivariate Poisson and negative-binomial models, which provides powerful new approaches for fitting these models. We show that particularly when detection probability and the number of sampling occasions are small, infinite estimates of abundance can arise. We propose a sample covariance as a diagnostic for this event, and demonstrate its good performance in the Poisson case. Infinite estimates may be missed in practice, due to numerical optimization procedures terminating at arbitrarily large values. It is shown that the use of a bound, K, for an infinite summation in the N-mixture likelihood can result in underestimation of abundance, so that default values of K in computer packages should be avoided. Instead we propose a simple automatic way to choose K. The methods are illustrated by analysis of data on Hermann's tortoise Testudo hermanni. PMID:25314629

Effect of Vertical Concentration Gradient on Globally Planar Detonation with Detailed Reaction Mechanism

NASA Astrophysics Data System (ADS)

Song, Qingguana; Wang, Cheng; Han, Yong; Gao, Dayuan; Duan, Yingliang

2017-06-01

Since detonation often initiates and propagates in the non-homogeneous mixtures, investigating its behavior in non-uniform mixtures is significant not only for the industrial explosion in the leakage combustible gas, but also for the experimental investigations with a vertical concentration gradient caused by the difference in the molecular weight of gas mixture. Objective of this work is to show the detonation behavior in the mixture with different concentration gradients with detailed chemical reaction mechanism. A globally planar detonation in H2-O2 system is simulated by a high-resolution code based on the fifth-order weighted essentially non-oscillatory (WENO) scheme in spatial discretization and the third-order Additive Runge-Kutta schemes in time discretization. The different shocked combustion modes appear in the rich-fuel and poor-fuel layers due to the concentration gradient effect. Globally, for the cases with the lower gradient detonation can be sustained in a way of the alternation of the multi-heads mode and single-head mode, whereas for the cases with the higher gradient detonation propagates with a single-head mode. Institute of Chemical Materials, CAEP.

River self-organisation inhibits discharge control on waterfall migration.

PubMed

Baynes, Edwin R C; Lague, Dimitri; Attal, Mikaël; Gangloff, Aurélien; Kirstein, Linda A; Dugmore, Andrew J

2018-02-05

The action of rivers within valleys is fundamentally important in controlling landscape morphology, and how it responds to tectonic or climate change. The response of landscapes to external forcing usually results in sequential changes to river long profiles and the upstream migration of waterfalls. Currently, models of this response assume a relationship between waterfall retreat rate and drainage area at the location of the waterfall. Using an experimental study, we show that this assumption has limited application. Due to a self-regulatory response of channel geometry to higher discharge through increasing channel width, the bed shear stress at the lip of the experimental waterfall remains almost constant, so there was no observed change in the upstream retreat rate despite an order of magnitude increase in discharge. Crucially, however, the strength of the bedrock material exhibits a clear control on the magnitude of the mean retreat rate, highlighting the importance of lithology in setting the rate at which landscapes respond to external forcing. As a result existing numerical models of landscape evolution that simulate the retreat of waterfalls as a function of drainage area with a fixed erodibility constant should be re-evaluated to consider spatial heterogeneity in erodibility and channel self-organisation.

Quantifying the Consumptive Landscape in the Potomac Watershed Upstream From Washington DC

NASA Astrophysics Data System (ADS)

Kearns, M.; Zegre, N.; Fernandez, R.

2017-12-01

Some of the largest and fastest-growing eastern cities depend upon Appalachian headwaters for their fresh water. Today's relative abundance of water may be at risk: changes in climate and land use could alter the availability of surface water and human consumption could increase to meet the needs of a growing population and economy. Neither the supply of surface water nor the various withdrawals that support our population, irrigation, energy, and industry are distributed uniformly throughout our watersheds. This study correlates surface water withdrawals, consumptive use coefficients, and land-use/land-cover datasets to create a model for quantifying anthropogenic water consumption. The model suggests a method for downscaling and redistributing USGS county-level surface water withdrawals to 30 meter cells. Initially completed for the Potomac River watershed upstream from Washington DC's public supply intake, this approach could easily scale regionally or nationally. When combined with runoff estimates over the same landscape, the net-production or net-consumption of an area of interest may be calculated at high resolution. By better understanding the spatial relationship between hydrologic supply and demand, we can seek to improve the efficiency and security of our water resources.

Hyperspectral proximal sensing of Salix Alba trees in the Sacco river valley (Latium, Italy).

PubMed

Moroni, Monica; Lupo, Emanuela; Cenedese, Antonio

2013-10-29

Recent developments in hardware and software have increased the possibilities and reduced the costs of hyperspectral proximal sensing. Through the analysis of high resolution spectroscopic measurements at the laboratory or field scales, this monitoring technique is suitable for quantitative estimates of biochemical and biophysical variables related to the physiological state of vegetation. Two systems for hyperspectral imaging have been designed and developed at DICEA-Sapienza University of Rome, one based on the use of spectrometers, the other on tunable interference filters. Both systems provide a high spectral and spatial resolution with low weight, power consumption and cost. This paper describes the set-up of the tunable filter platform and its application to the investigation of the environmental status of the region crossed by the Sacco river (Latium, Italy). This was achieved by analyzing the spectral response given by tree samples, with roots partly or wholly submerged in the river, located upstream and downstream of an industrial area affected by contamination. Data acquired is represented as reflectance indices as well as reflectance values. Broadband and narrowband indices based on pigment content and carotenoids vs. chlorophyll content suggest tree samples located upstream of the contaminated area are 'healthier' than those downstream.

Dynamic switching enables efficient bacterial colonization in flow.

PubMed

Kannan, Anerudh; Yang, Zhenbin; Kim, Minyoung Kevin; Stone, Howard A; Siryaporn, Albert

2018-05-22

Bacteria colonize environments that contain networks of moving fluids, including digestive pathways, blood vasculature in animals, and the xylem and phloem networks in plants. In these flow networks, bacteria form distinct biofilm structures that have an important role in pathogenesis. The physical mechanisms that determine the spatial organization of bacteria in flow are not understood. Here, we show that the bacterium P. aeruginosa colonizes flow networks using a cyclical process that consists of surface attachment, upstream movement, detachment, movement with the bulk flow, and surface reattachment. This process, which we have termed dynamic switching, distributes bacterial subpopulations upstream and downstream in flow through two phases: movement on surfaces and cellular movement via the bulk. The model equations that describe dynamic switching are identical to those that describe dynamic instability, a process that enables microtubules in eukaryotic cells to search space efficiently to capture chromosomes. Our results show that dynamic switching enables bacteria to explore flow networks efficiently, which maximizes dispersal and colonization and establishes the organizational structure of biofilms. A number of eukaryotic and mammalian cells also exhibit movement in two phases in flow, which suggests that dynamic switching is a modality that enables efficient dispersal for a broad range of cell types.

Evidence for serial discontinuity in the fish community of a heavily impounded river

USGS Publications Warehouse

Miranda, Leandro E.; Dembkowski, D.J.

2016-01-01

In the Tennessee River, USA, we examined lengthwise patterns in fish community structure and species richness within and among nine reservoirs organized in sequence and connected through navigational locks. Within reservoirs, the riverine, transition and lacustrine zones supported distinct, although overlapping, nearshore fish assemblages; differences were also reflected in measures of species richness. Spatial patterns were most apparent for rheophilic species, which increased in species richness and representation upstream within each reservoir and downstream across the chain of reservoirs. This pattern resembled a sawtooth wave, with the amplitude of the wave peaking in the riverine zone below each dam, and progressively higher wave amplitude developing downstream in the reservoir chain. The observed sawtooth pattern supports the serial discontinuity concept in that the continuity of the riverine fish community is interrupted by the lacustrine conditions created behind each dam. Upstream within each reservoir, and downstream in the chain of reservoirs, habitat characteristics become more riverine. To promote sustainability of rheophilic fishes and maintain biodiversity in impounded rivers, conservation plans could emphasize maintenance and preservation of riverine environments of the reservoir's upper reaches, while remaining cognizant of the broader basin trends that provide opportunities for a lengthwise array of conservation and management policy. 

The Hippo-YAP signaling pathway and contact inhibition of growth

PubMed Central

Gumbiner, Barry M.; Kim, Nam-Gyun

2014-01-01

ABSTRACT The Hippo-YAP pathway mediates the control of cell proliferation by contact inhibition as well as other attributes of the physical state of cells in tissues. Several mechanisms sense the spatial and physical organization of cells, and function through distinct upstream modules to stimulate Hippo-YAP signaling: adherens junction or cadherin–catenin complexes, epithelial polarity and tight junction complexes, the FAT-Dachsous morphogen pathway, as well as cell shape, actomyosin or mechanotransduction. Soluble extracellular factors also regulate Hippo pathway signaling, often inhibiting its activity. Indeed, the Hippo pathway mediates a reciprocal relationship between contact inhibition and mitogenic signaling. As a result, cells at the edges of a colony, a wound in a tissue or a tumor are more sensitive to ambient levels of growth factors and more likely to proliferate, migrate or differentiate through a YAP and/or TAZ-dependent process. Thus, the Hippo-YAP pathway senses and responds to the physical organization of cells in tissues and coordinates these physical cues with classic growth-factor-mediated signaling pathways. This Commentary is focused on the biological significance of Hippo-YAP signaling and how upstream regulatory modules of the pathway interact to produce biological outcomes. PMID:24532814

Chemical quality of the Saw Mill River, Westchester County, New York, 1981-83

USGS Publications Warehouse

Rogers, R.J.

1984-01-01

Surface waters, bottom sediments and coatings formed on artificial substrates (ceramic tiles) were analyzed to evaluate the chemical quality of the Saw Mill River, New York. Heavy metals, nutrients, and organic contaminants were studied. Dissolved orthophosphate concentrations were highest in the lower third of the river. Dissolved manganese was the only metal to exceed U.S. Environmental Protection Agency water-quality criteria. Arsenic, cadmium, copper, lead, and zinc concentrations were highest in waters from the lowest 4 river miles. Concentrations of copper, lead, and zinc in bottom sediments from the lowest 3 river miles were greater than in upstream sediments. Concentrations of nine heavy metals were higher on tiles emplaced below river mile 3 than on tiles upstream. Few organic compounds were detected in the water column; none persisted at all sites. Chlordane, DDD, DDE, DDT, dieldrin, and polychlorinated biphenyls (PCB's) were found in bottom sediments throughout the basin. PCB concentrations were highest in the lowest 6 river miles; the other organic compounds exhibited no spatial patterns. Polynuclear aromatic hydrocarbons were most abundant in bottom sediments from the lowest 2 river miles. Collectively the distribution of contaminants indicates that river quality deteriorates in the lower, more heavily urbanized reach. (USGS)

Fungicide-induced transposon movement in Monilinia fructicola.

PubMed

Chen, Fengping; Everhart, Sydney E; Bryson, P Karen; Luo, Chaoxi; Song, Xi; Liu, Xili; Schnabel, Guido

2015-12-01

Repeated applications of fungicides with a single mode of action are believed to select for pre-existing resistant strains in a pathogen population, while the impact of sub-lethal doses of such fungicides on sensitive members of the population is unknown. In this study, in vitro evidence is presented that continuous exposure of Monilinia fructicola mycelium to some fungicides can induce genetic change in form of transposon transposition. Three fungicide-sensitive M. fructicola isolates were exposed in 12 weekly transfers of mycelia to a dose gradient of demethylation inhibitor fungicide (DMI) SYP-Z048 and quinone outside inhibitor fungicide (QoI) azoxystrobin in solo or mixture treatments. Evidence of mutagenesis was assessed by monitoring Mftc1, a multicopy transposable element of M. fructicola, by PCR and Southern blot analysis. Movement of Mftc1 was observed following azoxystrobin and azoxystrobin plus SYP-Z048 treatments in two of the three isolates, but not in the non-fungicide-treated controls. Interestingly, the upstream promoter region of MfCYP51 was a prime target for Mftc1 transposition in these isolates. Transposition of Mftc1 was verified by Southern blot in two of three isolates from another, similar experiment following prolonged, sublethal azoxystrobin exposure, although in these isolates movement of Mftc1 in the upstream MfCYP51 promoter region was not observed. More research is warranted to determine whether fungicide-induced mutagenesis may also happen under field conditions. Copyright © 2015 Elsevier Inc. All rights reserved.

An experimental study of geyser-like flows induced by a pressurized air pocket

NASA Astrophysics Data System (ADS)

Elayeb, I. S.; Leon, A.; Choi, Y.; Alnahit, A. O.

2015-12-01

Previous studies argues that the entrapment of pressurized air pockets within combined sewer systems can produce geyser flows, which is an oscillating jetting of a mixture of gas-liquid flows. To verify that pressurized air pockets can effectively produce geysers, laboratory experiments were conducted. However, past experiments were conducted in relatively small-scale apparatus (i.e. maximum φ2" vertical shaft). This study conducted a set of experiments in a larger apparatus. The experimental setup consists of an upstream head tank, a downstream head tank, a horizontal pipe (46.5ft long, φ6") and a vertical pipe (10ft long, φ6"). The initial condition for the experiments is constant flow discharge through the horizontal pipe. The experiments are initiated by injecting an air pocket with pre-determined volume and pressure at the upstream end of the horizontal pipe. The air pocket propagates through the horizontal pipe until it arrives to the vertical shaft, where it is released producing a geyser-like flow. Three flow rates in the horizontal pipe and three injected air pressures were tested. The variables measured were pressure at two locations in the horizontal pipe and two locations in the vertical pipe. High resolution videos at two regions in the vertical shaft were also recorded. To gain further insights in the physics of air-water interaction, the laboratory experiments were complemented with numerical simulations conducted using a commercial 3D CFD model, previously validated with experiments.

Experimental and theoretical study of combustion jet ignition

NASA Technical Reports Server (NTRS)

Chen, D. Y.; Ghoniem, A. F.; Oppenheim, A. K.

1983-01-01

A combustion jet ignition system was developed to generate turbulent jets of combustion products containing free radicals and to discharge them as ignition sources into a combustible medium. In order to understand the ignition and the inflammation processes caused by combustion jets, the studies of the fluid mechanical properties of turbulent jets with and without combustion were conducted theoretically and experimentally. Experiments using a specially designed igniter, with a prechamber to build up and control the stagnation pressure upstream of the orifice, were conducted to investigate the formation processes of turbulent jets of combustion products. The penetration speed of combustion jets has been found to be constant initially and then decreases monotonically as turbulent jets of combustion products travel closer to the wall. This initial penetration speed to combustion jets is proportional to the initial stagnation pressure upstream of the orifice for the same stoichiometric mixture. Computer simulations by Chorin's Random Vortex Method implemented with the flame propagation algorithm for the theoretical model of turbulent jets with and without combustion were performed to study the turbulent jet flow field. In the formation processes of the turbulent jets, the large-scale eddy structure of turbulence, the so-called coherent structure, dominates the entrainment and mixing processes. The large-scale eddy structure of turbulent jets in this study is constructed by a series of vortex pairs, which are organized in the form of a staggered array of vortex clouds generating local recirculation flow patterns.

Numerical trials of HISSE

NASA Technical Reports Server (NTRS)

Peters, C.; Kampe, F. (Principal Investigator)

1980-01-01

The mathematical description and implementation of the statistical estimation procedure known as the Houston integrated spatial/spectral estimator (HISSE) is discussed. HISSE is based on a normal mixture model and is designed to take advantage of spectral and spatial information of LANDSAT data pixels, utilizing the initial classification and clustering information provided by the AMOEBA algorithm. The HISSE calculates parametric estimates of class proportions which reduce the error inherent in estimates derived from typical classify and count procedures common to nonparametric clustering algorithms. It also singles out spatial groupings of pixels which are most suitable for labeling classes. These calculations are designed to aid the analyst/interpreter in labeling patches with a crop class label. Finally, HISSE's initial performance on an actual LANDSAT agricultural ground truth data set is reported.

Adaptive web sampling.

PubMed

Thompson, Steven K

2006-12-01

A flexible class of adaptive sampling designs is introduced for sampling in network and spatial settings. In the designs, selections are made sequentially with a mixture distribution based on an active set that changes as the sampling progresses, using network or spatial relationships as well as sample values. The new designs have certain advantages compared with previously existing adaptive and link-tracing designs, including control over sample sizes and of the proportion of effort allocated to adaptive selections. Efficient inference involves averaging over sample paths consistent with the minimal sufficient statistic. A Markov chain resampling method makes the inference computationally feasible. The designs are evaluated in network and spatial settings using two empirical populations: a hidden human population at high risk for HIV/AIDS and an unevenly distributed bird population.

Systematic developmental neurotoxicity assessment of a representative PAH Superfund mixture using zebrafish

DOE PAGES

Geier, Mitra C.; James Minick, D.; Truong, Lisa; ...

2018-04-01

Superfund sites often consist of complex mixtures of polycyclic aromatic hydrocarbons (PAHs). It is widely recognized that PAHs pose risks to human and environmental health, but the risks posed by exposure to PAH mixtures are unclear. Here, we constructed an environmentally relevant PAH mixture with the top 10 most prevalent PAHs (SM10) from a Superfund site derived from environmental passive sampling data. Using the zebrafish model, we measured body burden at 48 hours post fertilization (hpf) and evaluated the developmental and neurotoxicity of SM10 and the 10 individual constituents at 24 hours post fertilization (hpf) and 5 days post fertilizationmore » (dpf). Zebrafish embryos were exposed from 6 to 120 hpf to (1) the SM10 mixture, (2) a variety of individual PAHs: pyrene, fluoranthene, retene, benzo[a]anthracene, chrysene, naphthalene, acenaphthene, phenanthrene, fluorene, and 2-methylnaphthalene. We demonstrated that SM10 and only 3 of the individual PAHs were developmentally toxic. Subsequently, we constructed and exposed developing zebrafish to two sub-mixtures: SM3 (comprised of 3 of the developmentally toxicity PAHs) and SM7 (7 non-developmentally toxic PAHs). We found that the SM3 toxicity profile was similar to SM10, and SM7 unexpectedly elicited developmental toxicity unlike that seen with its individual components. The results demonstrated that the overall developmental toxicity in the mixtures could be explained using the general concentration addition model. To determine if exposures activated the AHR pathway, spatial expression of CYP1A was evaluated in the 10 individual PAHs and the 3 mixtures at 5 dpf. Results showed activation of AHR in the liver and vasculature for the mixtures and some individual PAHs. Embryos exposed to SM10 during development and raised in chemical-free water into adulthood exhibited decreased learning and responses to startle stimulus indicating that developmental SM10 exposures affect neurobehavior. Collectively, these results exemplify the utility of zebrafish to investigate the developmental and neurotoxicity of complex mixtures.« less

Systematic developmental neurotoxicity assessment of a representative PAH Superfund mixture using zebrafish

DOE Office of Scientific and Technical Information (OSTI.GOV)

Geier, Mitra C.; James Minick, D.; Truong, Lisa

Superfund sites often consist of complex mixtures of polycyclic aromatic hydrocarbons (PAHs). It is widely recognized that PAHs pose risks to human and environmental health, but the risks posed by exposure to PAH mixtures are unclear. Here, we constructed an environmentally relevant PAH mixture with the top 10 most prevalent PAHs (SM10) from a Superfund site derived from environmental passive sampling data. Using the zebrafish model, we measured body burden at 48 hours post fertilization (hpf) and evaluated the developmental and neurotoxicity of SM10 and the 10 individual constituents at 24 hours post fertilization (hpf) and 5 days post fertilizationmore » (dpf). Zebrafish embryos were exposed from 6 to 120 hpf to (1) the SM10 mixture, (2) a variety of individual PAHs: pyrene, fluoranthene, retene, benzo[a]anthracene, chrysene, naphthalene, acenaphthene, phenanthrene, fluorene, and 2-methylnaphthalene. We demonstrated that SM10 and only 3 of the individual PAHs were developmentally toxic. Subsequently, we constructed and exposed developing zebrafish to two sub-mixtures: SM3 (comprised of 3 of the developmentally toxicity PAHs) and SM7 (7 non-developmentally toxic PAHs). We found that the SM3 toxicity profile was similar to SM10, and SM7 unexpectedly elicited developmental toxicity unlike that seen with its individual components. The results demonstrated that the overall developmental toxicity in the mixtures could be explained using the general concentration addition model. To determine if exposures activated the AHR pathway, spatial expression of CYP1A was evaluated in the 10 individual PAHs and the 3 mixtures at 5 dpf. Results showed activation of AHR in the liver and vasculature for the mixtures and some individual PAHs. Embryos exposed to SM10 during development and raised in chemical-free water into adulthood exhibited decreased learning and responses to startle stimulus indicating that developmental SM10 exposures affect neurobehavior. Collectively, these results exemplify the utility of zebrafish to investigate the developmental and neurotoxicity of complex mixtures.« less

Navier-Stokes analysis of cold scramjet-afterbody flows

NASA Technical Reports Server (NTRS)

Baysal, Oktay; Engelund, Walter C.; Eleshaky, Mohamed E.

1989-01-01

The progress of two efforts in coding solutions of Navier-Stokes equations is summarized. The first effort concerns a 3-D space marching parabolized Navier-Stokes (PNS) code being modified to compute the supersonic mixing flow through an internal/external expansion nozzle with multicomponent gases. The 3-D PNS equations, coupled with a set of species continuity equations, are solved using an implicit finite difference scheme. The completed work is summarized and includes code modifications for four chemical species, computing the flow upstream of the upper cowl for a theoretical air mixture, developing an initial plane solution for the inner nozzle region, and computing the flow inside the nozzle for both a N2/O2 mixture and a Freon-12/Ar mixture, and plotting density-pressure contours for the inner nozzle region. The second effort concerns a full Navier-Stokes code. The species continuity equations account for the diffusion of multiple gases. This 3-D explicit afterbody code has the ability to use high order numerical integration schemes such as the 4th order MacCormack, and the Gottlieb-MacCormack schemes. Changes to the work are listed and include, but are not limited to: (1) internal/external flow capability; (2) new treatments of the cowl wall boundary conditions and relaxed computations around the cowl region and cowl tip; (3) the entering of the thermodynamic and transport properties of Freon-12, Ar, O, and N; (4) modification to the Baldwin-Lomax turbulence model to account for turbulent eddies generated by cowl walls inside and external to the nozzle; and (5) adopting a relaxation formula to account for the turbulence in the mixing shear layer.

Spatio-temporal variability of evapotranspiration and energy fluxes over Heihe River Basin, China

NASA Astrophysics Data System (ADS)

Xu, Z.; Liu, S.; Xu, T.; Song, L.; Wang, X.

2017-12-01

Evapotranspiration (ET) is an essential component of energy and water budgets and is an important process in the soil-plant-atmosphere continuum (SPAC). Some important ecosystem parameters and processes, such as soil moisture, vegetation productivity, ecosystem energy, water, and nutrient budgets, are influenced by ET. The Heihe River Basin (HRB) is the second largest inland river, with an area of approximately 140,000 km2. A diverse land covers are distributing in HRB, which is characterized by distinct cold and arid landscapes, glaciers, frozen soil, alpine meadow, forest, irrigated crops, riparian ecosystem, and desert from upstream to downstream. Up to now, there was not a quantitative characterization of ET and energy flux over HRB; therefore, special attention should be paid on this term. A comprehensive hydrometeorological observatory was established since 2008 and completed in 2013. The network included 3 superstations and 18 ordinary stations, covering the main underlying surfaces in the basin, including alpine meadow, cropland, desert, wetland, frozen soil, Tamarix chinensis, and Populus euphratica, etc. Reliable data were obtained after the routine instrument maintenance and carefully data processing. ET and energy flux observations were made more than 5 years (2012-2017) using eddy covariance (EC) systems and large aperture scintillometers (LAS), and the seasonal and interannual variability of ET and its influencing factors were quantitatively analyzed with ET in main underlying surfaces of 400-580 mm in alpine meadow (upstream), 600-700 mm in cropland (midstream), 500-650 mm in riparian forest (downstream), 40 mm in desert (downstream). Meanwhile, the spatial distributions of ET were investigated based on site observations using machine learning techniques. Further, ET partitioning (evaporation (E) and transpiration (T)) was acquired through a method of underlying water use efficiency based on EC observations. The spatial variations of E and T were also given using DTD (Dual-Temperature Difference) model. In this study, a quantitative spatial-temporal variability of ET was characterized as well as the characterizations of E and T, which was significant to understand the water cycle over HRB and helpful to the subsequent researchers.

Domestication-driven Gossypium profilin 1 (GhPRF1) gene transduces early flowering phenotype in tobacco by spatial alteration of apical/floral-meristem related gene expression.

PubMed

Pandey, Dhananjay K; Chaudhary, Bhupendra

2016-05-13

Plant profilin genes encode core cell-wall structural proteins and are evidenced for their up-regulation under cotton domestication. Notwithstanding striking discoveries in the genetics of cell-wall organization in plants, little is explicit about the manner in which profilin-mediated molecular interplay and corresponding networks are altered, especially during cellular signalling of apical meristem determinacy and flower development. Here we show that the ectopic expression of GhPRF1 gene in tobacco resulted in the hyperactivation of apical meristem and early flowering phenotype with increased flower number in comparison to the control plants. Spatial expression alteration in CLV1, a key meristem-determinacy gene, is induced by the GhPRF1 overexpression in a WUS-dependent manner and mediates cell signalling to promote flowering. But no such expression alterations are recorded in the GhPRF1-RNAi lines. The GhPRF1 transduces key positive flowering regulator AP1 gene via coordinated expression of FT4, SOC1, FLC1 and FT1 genes involved in the apical-to-floral meristem signalling cascade which is consistent with our in silico profilin interaction data. Remarkably, these positive and negative flowering regulators are spatially controlled by the Actin-Related Protein (ARP) genes, specifically ARP4 and ARP6 in proximate association with profilins. This study provides a novel and systematic link between GhPRF1 gene expression and the flower primordium initiation via up-regulation of the ARP genes, and an insight into the functional characterization of GhPRF1 gene acting upstream to the flowering mechanism. Also, the transgenic plants expressing GhPRF1 gene show an increase in the plant height, internode length, leaf size and plant vigor. Overexpression of GhPRF1 gene induced early and increased flowering in tobacco with enhanced plant vigor. During apical meristem determinacy and flower development, the GhPRF1 gene directly influences key flowering regulators through ARP-genes, indicating for its role upstream in the apical-to-floral meristem signalling cascade.

Raman spectroscopy and imaging to detect contaminants for food safety applications

NASA Astrophysics Data System (ADS)

Chao, Kuanglin; Qin, Jianwei; Kim, Moon S.; Peng, Yankun; Chan, Diane; Cheng, Yu-Che

2013-05-01

This study presents the use of Raman chemical imaging for the screening of dry milk powder for the presence of chemical contaminants and Raman spectroscopy for quantitative assessment of chemical contaminants in liquid milk. For image-based screening, melamine was mixed into dry milk at concentrations (w/w) between 0.2% and 10.0%, and images of the mixtures were analyzed by a spectral information divergence algorithm. Ammonium sulfate, dicyandiamide, and urea were each separately mixed into dry milk at concentrations (w/w) between 0.5% and 5.0%, and an algorithm based on self-modeling mixture analysis was applied to these sample images. The contaminants were successfully detected and the spatial distribution of the contaminants within the sample mixtures was visualized using these algorithms. Liquid milk mixtures were prepared with melamine at concentrations between 0.04% and 0.30%, with ammonium sulfate and with urea at concentrations between 0.1% and 10.0%, and with dicyandiamide at concentrations between 0.1% and 4.0%. Analysis of the Raman spectra from the liquid mixtures showed linear relationships between the Raman intensities and the chemical concentrations. Although further studies are necessary, Raman chemical imaging and spectroscopy show promise for use in detecting and evaluating contaminants in food ingredients.

Analyte species and concentration identification using differentially functionalized microcantilever arrays and artificial neural networks

DOE Office of Scientific and Technical Information (OSTI.GOV)

Senesac, Larry R; Datskos, Panos G; Sepaniak, Michael J

2006-01-01

In the present work, we have performed analyte species and concentration identification using an array of ten differentially functionalized microcantilevers coupled with a back-propagation artificial neural network pattern recognition algorithm. The array consists of ten nanostructured silicon microcantilevers functionalized by polymeric and gas chromatography phases and macrocyclic receptors as spatially dense, differentially responding sensing layers for identification and quantitation of individual analyte(s) and their binary mixtures. The array response (i.e. cantilever bending) to analyte vapor was measured by an optical readout scheme and the responses were recorded for a selection of individual analytes as well as several binary mixtures. Anmore » artificial neural network (ANN) was designed and trained to recognize not only the individual analytes and binary mixtures, but also to determine the concentration of individual components in a mixture. To the best of our knowledge, ANNs have not been applied to microcantilever array responses previously to determine concentrations of individual analytes. The trained ANN correctly identified the eleven test analyte(s) as individual components, most with probabilities greater than 97%, whereas it did not misidentify an unknown (untrained) analyte. Demonstrated unique aspects of this work include an ability to measure binary mixtures and provide both qualitative (identification) and quantitative (concentration) information with array-ANN-based sensor methodologies.« less

Energetic-ion acceleration and transport in the upstream region of Jupiter: Voyager 1 and 2

NASA Technical Reports Server (NTRS)

Baker, D. N.; Zwickl, R. D.; Carbary, J. F.; Krimigis, S. M.; Lepping, R. P.

1982-01-01

Long-lived upstream energetic ion events at Jupiter appear to be very similar in nearly all respects to upstream ion events at Earth. A notable difference between the two planetary systems is the enhanced heavy ion compositional signature reported for the Jovian events. This compositional feature has suggested that ions escaping from the Jovian magnetosphere play an important role in forming upstream ion populations at Jupiter. In contrast, models of energetic upstream ions at Earth emphasize in situ acceleration of reflected solar wind ions within the upstream region itself. Using Voyager 1 and 2 energetic ( approximately 30 keV) ion measurements near the magnetopause, in the magnetosheath, and immediately upstream of the bow shock, the compositional patterns are examined together with typical energy spectra in each of these regions. A model involving upstream Fermi acceleration early in events and emphasizing energetic particle escape in the prenoon part of the Jovian magnetosphere late in events is presented to explain many of the features in the upstream region of Jupiter.

A method for aircraft afterburner combustion without flameholders

NASA Astrophysics Data System (ADS)

Birmaher, Shai

2009-12-01

State of the art aircraft afterburners employ spray bars to inject fuel and flameholders to stabilize the combustion process. Such afterburner designs significantly increase the length (and thus weight), pressure losses, and observability of the engine. This thesis presents a feasibility study of a compact 'prime and trigger' (PAT) afterburner concept that eliminates the fuel spray bars and flameholders and, thus, eliminates the above-mentioned problems. In this concept, afterburner fuel is injected just upstream or in between the turbine stages. As the fuel travels through the turbine stages, it evaporates, mixes with the bulk flow, and undergoes some chemical reactions without any significant heat release, a process referred to as 'priming'. Downstream of the turbine stages, combustion could take place through autoignition. However, if fuel autoignition does not occur or if autoignition does not produce a combustion zone that is stable and highly efficient, then a low power pilot, or 'trigger', can be used to control the combustion process. The envisioned trigger for the PAT concept is a jet of product gas from ultra-rich hydrocarbon/air combustion that is injected through the afterburner liner. This 'partial oxidation' (POx) gas, which consists mostly of H2, CO, and diluents, rapidly produces radicals and heat that accelerate the autoignition of the primed mixture and, thus, provide an anchor point for the afterburner combustion process. The objective of this research was to demonstrate the feasibility of the PAT concept by showing that (1) combustion of fuel injected within or upstream of turbine stages can occur only downstream of the turbine stages, and (2) the combustion zone is compact, stable and efficient. This was accomplished using two experimental facilities, a developed theoretical model, and Chemkin simulations. The first facility, termed the Afterburner Facility (AF), simulated the bulk flow temperature, velocity and O2 content through a turbojet combustor, turbine stage and afterburner. To model the PAT concept, Jet-A was injected upstream of the simulated turbine stage and a H2 jet was used to trigger the primed Jet-A combustion process downstream of the turbine stage. H2 was used because POx gas was not available for experiments. The second facility, termed the Propane Autoignition Combustor (PAC), was essentially a scaled-down, simplified version of the AF. The PAC experiments focused on the trigger stage of the PAT concept, using H 2 in lieu of POx gas and employing measurement techniques that were in some ways more detailed than in the AF experiments. The developed model simulated the physics of fuel priming in the AF and predicted the Jet-A autoignition location. It was used to predict and interpret the AF results and to study the feasibility of the PAT concept at pressures outside the AF operating range. Finally, the Chemkin simulations were used to examine the effect of several POx gas compositions on the Jet-A/vitiated-air autoignition process; to compare the POx and H2 triggers; and to explore several reasons for why POx gas and H2 are suitable trigger mechanisms. he experimental, theoretical, and numerical results obtained in this investigation indicated that the PAT concept provides a feasible approach to afterburner combustion. The experiments in the AF showed that the ignition delay of Jet-A is sufficiently long to allow fuel injection within turbine stages without significant heat release upstream of the afterburner. In the AF experiments without the H2 trigger, Jet-A combustion was achieved through autoignition; however, the autoignition combustion zone exhibited large axial fluctuations and low combustion efficiency. The H2 trigger was able to shift the combustion zone upstream, make it more compact, reduce fluctuations in its axial position, and raise the combustion efficiency to nearly 100%. The PAC experiments also showed that a H2 trigger can shift the combustion zone upstream, make it more compact, and increase the combustion efficiency. The PAC results were obtained with lower O 2 content and higher equivalence ratios than in the AF. Therefore, the combined AF and PAC results suggested that the PAT concept is feasible over a wide range of operating conditions. The developed model showed good agreement with the AF results. It also predicted that the PAT concept is feasible at bulk flow pressures outside the AF operating range. Finally, the Chemkin results showed that both the H2 and POx gas triggers can significantly reduce the ignition delay time of primed Jet-A/vitiated air mixtures. Thus, POx gas is a suitable trigger for the PAT concept and should be tested in future experimental investigations.

A simulation study to determine the attenuation and bias in health risk estimates due to exposure measurement error in bi-pollutant models

EPA Science Inventory

To understand the combined health effects of exposure to ambient air pollutant mixtures, it is becoming more common to include multiple pollutants in epidemiologic models. However, the complex spatial and temporal pattern of ambient pollutant concentrations and related exposures ...

Textural analysis of historical aerial photography to characterize woody plant encroachment in South African savanna

Treesearch

Andrew T. Hudak; Carol A. Wessman

1998-01-01

Transitions from grassland to shrubland through woody plant encroachment result in potentially significant shifts in savanna ecosystem function. Given high resolution imagery, a textural index could prove useful for mapping woody plant densities and monitoring woody plant encroachment across savanna landscapes. Spatial heterogeneity introduced through mixtures of...

Recent advances in IR liquid crystal spatial light modulators

NASA Astrophysics Data System (ADS)

Peng, Fenglin; Twieg, Robert J.; Wu, Shin-Tson

2015-09-01

Liquid crystal (LC) is an amazing class of electro-optic media; its applications span from visible to infrared, millimeter wave, and terahertz regions. In the visible and short-wavelength infrared (SWIR) regions, most LCs are highly transparent. However, to extend the electro-optic application of LCs into MWIR and LWIR, several key technical challenges have to be overcome: (1) low absorption loss, (2) high birefringence, (3) low operation voltage, and (4) fast response time. In the MWIR and LWIR regions, several fundamental molecular vibration bands and overtones exist, which contribute to high absorption loss. The absorbed light turns to heat and then alters the birefringence locally, which in turns causes spatially non-uniform phase modulation. To suppress the optical loss, several approaches have been investigated: (1) Employing thin cell gap by choosing a high birefringence LC mixture; (2) Shifting the absorption bands outside the spectral region of interest by deuteration, fluorination, or chlorination; (3) Reducing the overtone absorption by using a short alkyl chain. In this paper, we report some recently developed chlorinated LC compounds and mixtures with low absorption loss in the SWIR and MWIR regions. To achieve fast response time, we demonstrated a polymer network liquid crystal with 2π phase change at MWIR and response time less than 5 ms. Approaches to extend such a liquid crystal spatial light modulator to long-wavelength infrared will be discussed.

High spatial resolution measurements in a single stage ram accelerator

NASA Technical Reports Server (NTRS)

Hinkey, J. B.; Burnham, E. A.; Bruckner, A. P.

1992-01-01

High spatial resolution experimental tube wall pressure measurements of ram accelerator gas dynamic phenomena are presented in this paper. The ram accelerator is a ramjet-in-tube device which operates in a manner similar to that of a conventional ramjet. The projectile resembles the centerbody of a ramjet and travels supersonically through a tube filled with a combustible gaseous mixture, with the tube acting as the outer cowling. Pressure data are recorded as the projectile passes by sensors mounted in the tube wall at various locations along the tube. Utilization of special highly instrumented sections of tube has allowed the recording of gas dynamic phenomena with high resolution. High spatial resolution tube wall pressure data from the three regimes of propulsion studied to date (subdetonative, transdetonative, and superdetonative) in a single stage gas mixture are presented and reveal the three-dimensional character of the flow field induced by projectile fins and the canting of the fins and the canting of the projectile body relative to the tube wall. Also presented for comparison to the experimental data are calculations made with an inviscid, three-dimensional CFD code. The knowledge gained from these experiments and simulations is useful in understanding the underlying nature of ram accelerator propulsive regimes, as well as assisting in the validation of three-dimensional CFD coded which model unsteady, chemically reactive flows.

Controls on sediment cover in bedrock-alluvial channels of the Henry Mountains, Utah

NASA Astrophysics Data System (ADS)

Hodge, R. A.; Yager, E.; Johnson, J. P.; Tranmer, A.

2017-12-01

The location and extent of sediment cover in bedrock-alluvial channels influences sediment transport rates, channel incision and instream ecology. However, factors affecting sediment cover and how it responds to changes in relative sediment supply have rarely been quantitatively evaluated in field settings. Using field surveys and SFM analysis of channel reach topography, we quantified sediment cover and channel properties including slope, width, grain size distributions, and bedrock and alluvial roughness in North Wash and Chelada Creek in the Henry Mountains, Utah. Along reaches where upstream sediment supply does not appear to be restricted, we find that the fraction of local bedrock exposure increases as a function of local relative transport capacity . In a downstream section of Chelada Creek, decadal-scale sediment supply has been restricted by an upstream culvert that has caused a backwater effect and corresponding upstream deposition. In this section, alluvial cover is uncorrelated with local stream power. To test the impact of relative sediment supply on sediment cover, a 1D sediment transport model was used to predict the equilibrium sediment cover in Chelada Creek under varying flow and sediment supply conditions. Sediment transport in each model section was predicted using the partial cover model of Johnson (2015), which accounts for differences in bedrock and alluvial roughness on critical shear stress and flow resistance. Model runs in which sediment supply was approximately equal to mean transport capacity produced a pattern of sediment cover which best matched the field observations upstream of the culvert. However, runs where sediment supply was under-capacity produced the pattern most similar to field observations downstream of the culvert, consistent with our field-based interpretations. Model results were insensitive to initial sediment cover, and equilibrium was relatively quickly reached, suggesting that the channel is responsive to changes in imposed conditions. Overall, our results suggest that alluvial cover fractions may be predictable at spatial scales relevant for landscape evolution modelling, but that local bed roughness and thresholds in relative sediment supply may need to be accounted for.

Long-range effect of cyanide on mercury methylation in a gold mining area in southern Ecuador.

PubMed

Guimaraes, Jean Remy Davée; Betancourt, Oscar; Miranda, Marcio Rodrigues; Barriga, Ramiro; Cueva, Edwin; Betancourt, Sebastián

2011-11-01

Small-scale gold mining in Portovelo-Zaruma, Southern Equador, performed by mercury amalgamation and cyanidation, yields 9-10 t of gold/annum, resulting in annual releases of around 0.65 t of inorganic mercury and 6000 t of sodium cyanide in the local river system. The release of sediments, cyanide, mercury, and other metals present in the ore such as lead, manganese and arsenic significantly reduces biodiversity downstream the processing plants and enriches metals in bottom sediments and biota. However, methylmercury concentrations in sediments downstream the mining area were recently found to be one order of magnitude lower than upstream or in small tributaries. In this study we investigated cyanide, bacterial activity in water and sediment and mercury methylation potentials in sediments along the Puyango river watershed, measured respectively by in-situ spectrophotometry and incubation with (3)H-leucine and (203)Hg(2+). Free cyanide was undetectable (<1 μg·L(-1)) upstream mining activities, reached 280 μg·L(-1) a few km downstream the processing plants area and was still detectable about 100 km downstream. At stations with detectable free cyanide in unfiltered water, 50% of it was dissolved and 50% associated to suspended particles. Bacterial activity and mercury methylation in sediment showed a similar spatial pattern, inverse to the one found for free cyanide in water, i.e. with significant values in pristine upstream sampling points (respectively 6.4 to 22 μgC·mg wet weight(-1)·h(-1) and 1.2 to 19% of total (203) Hg·gdry weight(-1)·day(-1)) and undetectable downstream the processing plants, returning to upstream values only in the most distant downstream stations. The data suggest that free cyanide oxidation was slower than would be expected from the high water turbulence, resulting in a long-range inhibition of bacterial activity and hence mercury methylation. The important mercury fluxes resultant from mining activities raise concerns about its biomethylation in coastal areas where many mangrove areas have been converted to shrimp farming. Copyright © 2011. Published by Elsevier B.V.

Can spatial statistical river temperature models be transferred between catchments?

NASA Astrophysics Data System (ADS)

Jackson, Faye L.; Fryer, Robert J.; Hannah, David M.; Malcolm, Iain A.

2017-09-01

There has been increasing use of spatial statistical models to understand and predict river temperature (Tw) from landscape covariates. However, it is not financially or logistically feasible to monitor all rivers and the transferability of such models has not been explored. This paper uses Tw data from four river catchments collected in August 2015 to assess how well spatial regression models predict the maximum 7-day rolling mean of daily maximum Tw (Twmax) within and between catchments. Models were fitted for each catchment separately using (1) landscape covariates only (LS models) and (2) landscape covariates and an air temperature (Ta) metric (LS_Ta models). All the LS models included upstream catchment area and three included a river network smoother (RNS) that accounted for unexplained spatial structure. The LS models transferred reasonably to other catchments, at least when predicting relative levels of Twmax. However, the predictions were biased when mean Twmax differed between catchments. The RNS was needed to characterise and predict finer-scale spatially correlated variation. Because the RNS was unique to each catchment and thus non-transferable, predictions were better within catchments than between catchments. A single model fitted to all catchments found no interactions between the landscape covariates and catchment, suggesting that the landscape relationships were transferable. The LS_Ta models transferred less well, with particularly poor performance when the relationship with the Ta metric was physically implausible or required extrapolation outside the range of the data. A single model fitted to all catchments found catchment-specific relationships between Twmax and the Ta metric, indicating that the Ta metric was not transferable. These findings improve our understanding of the transferability of spatial statistical river temperature models and provide a foundation for developing new approaches for predicting Tw at unmonitored locations across multiple catchments and larger spatial scales.

Near-field shock formation in noise propagation from a high-power jet aircraft.

PubMed

Gee, Kent L; Neilsen, Tracianne B; Downing, J Micah; James, Michael M; McKinley, Richard L; McKinley, Robert C; Wall, Alan T

2013-02-01

Noise measurements near the F-35A Joint Strike Fighter at military power are analyzed via spatial maps of overall and band pressure levels and skewness. Relative constancy of the pressure waveform skewness reveals that waveform asymmetry, characteristic of supersonic jets, is a source phenomenon originating farther upstream than the maximum overall level. Conversely, growth of the skewness of the time derivative with distance indicates that acoustic shocks largely form through the course of near-field propagation and are not generated explicitly by a source mechanism. These results potentially counter previous arguments that jet "crackle" is a source phenomenon.

Are two systemic fish assemblage sampling programmes on the upper Mississippi River telling us the same thing?

USGS Publications Warehouse

Dukerschein, J.T.; Bartels, A.D.; Ickes, B.S.; Pearson, M.S.

2013-01-01

We applied an Index of Biotic Integrity (IBI) used on Wisconsin/Minnesota waters of the upper Mississippi River (UMR) to compare data from two systemic sampling programmes. Ability to use data from multiple sampling programmes could extend spatial and temporal coverage of river assessment and monitoring efforts. We normalized for effort and tested fish community data collected by the Environmental Monitoring and Assessment Program-Great Rivers Ecosystems (EMAP-GRE) 2004–2006 and the Long Term Resource Monitoring Program (LTRMP) 1993–2006. Each programme used daytime electrofishing along main channel borders but with some methodological and design differences. EMAP-GRE, designed for baseline and, eventually, compliance monitoring, used a probabilistic, continuous design. LTRMP, designed primarily for baseline and trend monitoring, used a stratified random design in five discrete study reaches. Analysis of similarity indicated no significant difference between EMAP-GRE and LTRMP IBI scores (n=238; Global R= 0.052; significance level=0.972). Both datasets distinguished clear differences only between 'Fair' and 'Poor' condition categories, potentially supporting a 'pass–fail' assessment strategy. Thirteen years of LTRMP data demonstrated stable IBI scores through time in four of five reaches sampled. LTRMP and EMAPGRE IBI scores correlated along the UMR's upstream to downstream gradient (df [3, 25]; F=1.61; p=0.22). A decline in IBI scores from upstream to downstream was consistent with UMR fish community studies and a previous, empirically modelled human disturbance gradient. Comparability between EMAP-GRE (best upstream to downstream coverage) and LTRMP data (best coverage over time and across the floodplain) supports a next step of developing and testing a systemic, multi-metric fish index on the UMR that both approaches could inform.

Longitudinal structure in temperate stream fish communities: evaluating conceptual models with temporal data

USGS Publications Warehouse

Roberts, James H.; Hitt, Nathaniel P.

2010-01-01

Five conceptual models of longitudinal fish community organization in streams were examined: (1) niche diversity model (NDM), (2) stream continuum model (SCM), (3) immigrant accessibility model (IAM), (4) environmental stability model (ESM), and (5) adventitious stream model (ASM). We used differences among models in their predictions about temporal species turnover, along with five spatiotemporal fish community data sets, to evaluate model applicability. Models were similar in predicting a positive species richness–stream size relationship and longitudinal species nestedness, but differed in predicting either similar temporal species turnover throughout the stream continuum (NDM, SCM), higher turnover upstream (IAM, ESM), or higher turnover downstream (ASM). We calculated measures of spatial and temporal variation from spatiotemporal fish data in five wadeable streams in central and eastern North America spanning 34–68 years (French Creek [New York], Piasa Creek [Illinois], Spruce Run [Virginia], Little Stony Creek [Virginia], and Sinking Creek [Virginia]). All streams exhibited substantial species turnover (i.e., at least 27% turnover in stream-scale species pools), in contrast to the predictions of the SCM. Furthermore, community change was greater in downstream than upstream reaches in four of five streams. This result is most consistent with the ASM and suggests that downstream communities are strongly influenced by migrants to and from species pools outside the focal stream. In Sinking Creek, which is isolated from external species pools, temporal species turnover (via increased richness) was higher upstream than downstream, which is a pattern most consistent with the IAM or ESM. These results corroborate the hypothesis that temperate stream habitats and fish communities are temporally dynamic and that fish migration and environmental disturbances play fundamental roles in stream fish community organization.

Longitudinal gradients along a reservoir cascade

USGS Publications Warehouse

Miranda, L.E.; Habrat, M.D.; Miyazono, S.

2008-01-01

Reservoirs have traditionally been regarded as spatially independent entities rather than as longitudinal segments of a river system that are connected upstream and downstream to the river and other reservoirs. This view has frustrated advancement in reservoir science by impeding adequate organization of available information and by hindering interchanges with allied disciplines that often consider impounded rivers at the basin scale. We analyzed reservoir morphology, water quality, and fish assemblage data collected in 24 reservoirs of the Tennessee River; we wanted to describe longitudinal changes occurring at the scale of the entire reservoir series (i.e., cascade) and to test the hypothesis that fish communities and environmental factors display predictable gradients like those recognized for unimpounded rivers. We used a data set collected over a 7-year period; over 3 million fish representing 94 species were included in the data set. Characteristics such as reservoir mean depth, relative size of the limnetic zone, water retention time, oxygen stratification, thermal stratification, substrate size, and water level fluctuations increased in upstream reservoirs. Conversely, reservoir area, extent of riverine and littoral zones, access to floodplains and associated wetlands, habitat diversity, and nutrient and sediment inputs increased in downstream reservoirs. Upstream reservoirs included few, largely lacustrine, ubiquitous fish taxa that were characteristic of the lentic upper reaches of the basin. Fish species richness increased in a downstream direction from 12 to 67 species/ reservoir as riverine species became more common. Considering impoundments at a basin scale by viewing them as sections in a river or links in a chain may generate insight that is not always available when the impoundments are viewed as isolated entities. Basin-scale variables are rarely controllable but constrain the expression of processes at smaller scales and can facilitate the organization of reservoir management efforts. ?? Copyright by the American Fisheries Society 2008.

Formation of fluvial knickzones in Japanese mountainous areas: A spatial analysis using GIS and DEMs

NASA Astrophysics Data System (ADS)

Hayakawa, Y. S.; Oguchi, T.

2006-12-01

Fluvial knickzones are the elements of bedrock rivers that can enhance stream erosion into bedrock, and they can be key morphologies highlighting interactions among earth surface processes such as erosion, tectonics, and volcanism. This study examines the longitudinal profiles of Japanese mountain rivers to illustrate the distribution of knickzones and discusses their role in the landscape development. Using 50-m DEMs, knickzones were extracted based on a quantitative criterion, and 5,753 knickzones were identified in the rivers of ca. 65,000 km long. The location of the knickzones was then examined along with other GIS data including topography, geology and precipitation. Overall, topographical conditions have the strongest influences on knickzone abundance, and upstream steep reaches of the rivers are more favorable for knickzone existence. The knickzone abundance for each rock type is also controlled by stream gradients, and lighologic boundaries do not show significant correlations with the knickzone locations. The controls of lithologic substrate on the knickzone locations are therefore limited. The abundant knickzones in steep river reaches indicate a hydraulic origin of knickzones, where stream erosions have enough strength in shaping the bedrock. Moreover, the knickzones are frequently observed in reaches slightly upstream from the major confluences at which stream discharge abruptly increases, indicating that the hydraulic anomalies of water flows at the confluences can cause knickzones which may later migrate upstream. The other possible causes of knickzone initiation including volcanic, tectonic and climatic effects are also suggested. The abundant knickzones in Japanese mountain rivers, resulted from the interactions among surface processes, suggest that river morphology modeling needs to consider the initiation and development of knickzones. tokyo.ac.jp/~hayakawa/

Temporal and Spatial Evolution Characteristics of Disturbance Wave in a Hypersonic Boundary Layer due to Single-Frequency Entropy Disturbance

PubMed Central

Lv, Hongqing; Shi, Jianqiang

2014-01-01

By using a high-order accurate finite difference scheme, direct numerical simulation of hypersonic flow over an 8° half-wedge-angle blunt wedge under freestream single-frequency entropy disturbance is conducted; the generation and the temporal and spatial nonlinear evolution of boundary layer disturbance waves are investigated. Results show that, under the freestream single-frequency entropy disturbance, the entropy state of boundary layer is changed sharply and the disturbance waves within a certain frequency range are induced in the boundary layer. Furthermore, the amplitudes of disturbance waves in the period phase are larger than that in the response phase and ablation phase and the frequency range in the boundary layer in the period phase is narrower than that in these two phases. In addition, the mode competition, dominant mode transformation, and disturbance energy transfer exist among different modes both in temporal and in spatial evolution. The mode competition changes the characteristics of nonlinear evolution of the unstable waves in the boundary layer. The development of the most unstable mode along streamwise relies more on the motivation of disturbance waves in the upstream than that of other modes on this motivation. PMID:25143983

Temporal and spatial evolution characteristics of disturbance wave in a hypersonic boundary layer due to single-frequency entropy disturbance.

PubMed

Wang, Zhenqing; Tang, Xiaojun; Lv, Hongqing; Shi, Jianqiang

2014-01-01

By using a high-order accurate finite difference scheme, direct numerical simulation of hypersonic flow over an 8° half-wedge-angle blunt wedge under freestream single-frequency entropy disturbance is conducted; the generation and the temporal and spatial nonlinear evolution of boundary layer disturbance waves are investigated. Results show that, under the freestream single-frequency entropy disturbance, the entropy state of boundary layer is changed sharply and the disturbance waves within a certain frequency range are induced in the boundary layer. Furthermore, the amplitudes of disturbance waves in the period phase are larger than that in the response phase and ablation phase and the frequency range in the boundary layer in the period phase is narrower than that in these two phases. In addition, the mode competition, dominant mode transformation, and disturbance energy transfer exist among different modes both in temporal and in spatial evolution. The mode competition changes the characteristics of nonlinear evolution of the unstable waves in the boundary layer. The development of the most unstable mode along streamwise relies more on the motivation of disturbance waves in the upstream than that of other modes on this motivation.

Spatial Distribution of Resonance in the Velocity Field for Transonic Flow over a Rectangular Cavity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Beresh, Steven J.; Wagner, Justin L.; Casper, Katya M.

Pulse-burst particle image velocimetry (PIV) has been used to acquire time-resolved data at 37.5 kHz of the flow over a finite-width rectangular cavity at Mach 0.8. Power spectra of the PIV data reveal four resonance modes that match the frequencies detected simultaneously using high-frequency wall pressure sensors but whose magnitudes exhibit spatial dependence throughout the cavity. Spatio-temporal cross-correlations of velocity to pressure were calculated after bandpass filtering for specific resonance frequencies. Cross-correlation magnitudes express the distribution of resonance energy, revealing local maxima and minima at the edges of the shear layer attributable to wave interference between downstream- and upstream-propagating disturbances.more » Turbulence intensities were calculated using a triple decomposition and are greatest in the core of the shear layer for higher modes, where resonant energies ordinarily are lower. Most of the energy for the lowest mode lies in the recirculation region and results principally from turbulence rather than resonance. Together, the velocity-pressure cross-correlations and the triple-decomposition turbulence intensities explain the sources of energy identified in the spatial distributions of power spectra amplitudes.« less

Temporal and Spatial Response of a Turbulent Boundary Layer to Forcing by Synthetic Jets

NASA Astrophysics Data System (ADS)

Hanson, Ronald; Ganapathisubramani, Bharathram; Lavoie, Philippe

2016-11-01

In this experimental study we examine the spatial and temporal response of a turbulent boundary layer affected by a single, and pair of, synthetic jet actuator(s). The spatial signature of the boundary layer mean-flow has been previously shown to result from large vortical motions caused by the interaction between the synthetic jets and the cross flow. By means of hot-wire measurements, phase-locked to the synthetic jet input, the propagation of the unsteady disturbance can be quantified over the actuation cycle of a synthetic jet. Using long samples both the phase-locked variation of the periodic (actuation cycle) and turbulent fluctuations are examined. It is shown that both the mean flow and turbulence characteristics are markedly different across the span, owing to the three dimensionality of the upstream input. Further, the disturbance shape and phase of the phase-locked disturbance varies significantly with forcing level, in part owing to the disruption of the mean velocity. Particular focus is given to the interaction occurring between the near-wall and outer region scales, which vary across the span, with respect to various forcing conditions. The financial support of Airbus is gratefully acknowledged.

A spatial capture-recapture model to estimate fish survival and location from linear continuous monitoring arrays

USGS Publications Warehouse

Raabe, Joshua K.; Gardner, Beth; Hightower, Joseph E.

2013-01-01

We developed a spatial capture–recapture model to evaluate survival and activity centres (i.e., mean locations) of tagged individuals detected along a linear array. Our spatially explicit version of the Cormack–Jolly–Seber model, analyzed using a Bayesian framework, correlates movement between periods and can incorporate environmental or other covariates. We demonstrate the model using 2010 data for anadromous American shad (Alosa sapidissima) tagged with passive integrated transponders (PIT) at a weir near the mouth of a North Carolina river and passively monitored with an upstream array of PIT antennas. The river channel constrained migrations, resulting in linear, one-dimensional encounter histories that included both weir captures and antenna detections. Individual activity centres in a given time period were a function of the individual’s previous estimated location and the river conditions (i.e., gage height). Model results indicate high within-river spawning mortality (mean weekly survival = 0.80) and more extensive movements during elevated river conditions. This model is applicable for any linear array (e.g., rivers, shorelines, and corridors), opening new opportunities to study demographic parameters, movement or migration, and habitat use.

Spatial Distribution of Resonance in the Velocity Field for Transonic Flow over a Rectangular Cavity

DOE PAGES

Beresh, Steven J.; Wagner, Justin L.; Casper, Katya M.; ...

2017-07-27

Pulse-burst particle image velocimetry (PIV) has been used to acquire time-resolved data at 37.5 kHz of the flow over a finite-width rectangular cavity at Mach 0.8. Power spectra of the PIV data reveal four resonance modes that match the frequencies detected simultaneously using high-frequency wall pressure sensors but whose magnitudes exhibit spatial dependence throughout the cavity. Spatio-temporal cross-correlations of velocity to pressure were calculated after bandpass filtering for specific resonance frequencies. Cross-correlation magnitudes express the distribution of resonance energy, revealing local maxima and minima at the edges of the shear layer attributable to wave interference between downstream- and upstream-propagating disturbances.more » Turbulence intensities were calculated using a triple decomposition and are greatest in the core of the shear layer for higher modes, where resonant energies ordinarily are lower. Most of the energy for the lowest mode lies in the recirculation region and results principally from turbulence rather than resonance. Together, the velocity-pressure cross-correlations and the triple-decomposition turbulence intensities explain the sources of energy identified in the spatial distributions of power spectra amplitudes.« less

Spectral Mixture Analysis to map burned areas in Brazil's deforestation arc from 1992 to 2011

NASA Astrophysics Data System (ADS)

Antunes Daldegan, G.; Ribeiro, F.; Roberts, D. A.

2017-12-01

The two most extensive biomes in South America, the Amazon and the Cerrado, are subject to several fire events every dry season. Both are known for their ecological and environmental importance. However, due to the intensive human occupation over the last four decades, they have been facing high deforestation rates. The Cerrado biome is adapted to fire and is considered a fire-dependent landscape. In contrast, the Amazon as a tropical moist broadleaf forest does not display similar characteristics and is classified as a fire-sensitive landscape. Nonetheless, studies have shown that forest areas that have already been burned become more prone to experience recurrent burns. Remote sensing has been extensively used by a large number of researchers studying fire occurrence at a global scale, as well as in both landscapes aforementioned. Digital image processing aiming to map fire activity has been applied to a number of imagery from sensors of various spatial, temporal, and spectral resolutions. More specifically, several studies have used Landsat data to map fire scars in the Amazon forest and in the Cerrado. An advantage of using Landsat data is the potential to map fire scars at a finer spatial resolution, when compared to products derived from imagery of sensors featuring better temporal resolution but coarser spatial resolution, such as MODIS (Moderate Resolution Imaging Spectrometer) and GOES (Geostationary Operational Environmental Satellite). This study aimed to map burned areas present in the Amazon-Cerrado transition zone by applying Spectral Mixture Analysis on Landsat imagery for a period of 20 years (1992-2011). The study area is a subset of this ecotone, centered at the State of Mato Grosso. By taking advantage of the Landsat 5TM and Landsat 7ETM+ imagery collections available in Google Earth Engine platform and applying Spectral Mixture Analysis (SMA) techniques over them permitted to model fire scar fractions and delimitate burned areas. Overlaying yearly burned areas allowed to identify areas with high fire recurrence.

Local and Cumulative Impervious Cover of Massachusetts Stream Basins

USGS Publications Warehouse

Brandt, Sara L.; Steeves, Peter A.

2009-01-01

Impervious surfaces such as paved roads, parking lots, and building roofs can affect the natural streamflow patterns and ecosystems of nearby streams. This dataset summarizes the percentage of impervious area for watersheds across Massachusetts by using a newly available statewide 1-m binary raster dataset of impervious surface for 2005. In order to accurately capture the wide spatial variability of impervious surface, it was necessary to delineate a new set of finely discretized basin boundaries for Massachusetts. This new set of basins was delineated at a scale finer than that of the existing 12-digit Hydrologic Unit Code basins (HUC-12s) of the national Watershed Boundary Dataset. The dataset consists of three GIS shapefiles. The Massachusetts nested subbasins and the hydrologic units data layers consist of topographically delineated boundaries and their associated percentage of impervious cover for all of Massachusetts except Cape Cod, the Islands, and the Plymouth-Carver region. The Massachusetts groundwater-contributing areas data layer consists of groundwater contributing-area boundaries for streams and coastal areas of Cape Cod and the Plymouth-Carver region. These boundaries were delineated by using groundwater-flow models previously published by the U.S. Geological Survey. Subbasin and hydrologic unit boundaries were delineated statewide with the exception of Cape Cod and the Plymouth-Carver Region. For the purpose of this study, a subbasin is defined as the entire drainage area upstream of an outlet point. Subbasins draining to multiple outlet points on the same stream are nested. That is, a large downstream subbasin polygon comprises all of the smaller upstream subbasin polygons. A hydrologic unit is the intervening drainage area between a given outlet point and the outlet point of the next upstream unit (Fig. 1). Hydrologic units divide subbasins into discrete, nonoverlapping areas. Each hydrologic unit corresponds to a subbasin delineated from the same outlet point; the hydrologic unit and the subbasin share the same unique identifier attribute. Because the same set of outlet points was used for the delineation of subbasins and hydrologic units, the linework for both data layers is identical; however, polygon attributes differ because for a given outlet point, the subbasin polygon area is the sum of all the upstream hydrologic units. Impervious surface summarized for a subbasin represents the percentage of impervious surface area of the entire upstream watershed, whereas the impervious surface for a hydrologic unit represents the percentage of impervious surface area for the intervening drainage area between two outlet points.

Mesozooplankton affinities in a recovering freshwater estuary

NASA Astrophysics Data System (ADS)

Chambord, Sophie; Maris, Tom; Colas, Fanny; Van Engeland, Tom; Sossou, Akoko-C.; Azémar, Frédéric; Le Coz, Maïwen; Cox, Tom; Buisson, Laetitia; Souissi, Sami; Meire, Patrick; Tackx, Michèle

2016-08-01

Water quality of the Scheldt estuary (Belgium/The Netherlands) has considerably improved in recent years, especially in the upstream, freshwater reaches. Within the zooplankton community, the copepod Eurytemora affinis, typically abundant in brackish water and quasi-absent from freshwater before 2007, has since substantially developed in the latter, where it now represents 90% of the crustacean mesozooplankton community. Simultaneously, cyclopoid copepod abundance has greatly decreased, while cladoceran abundance did not change. The study aim was: 1) to verify if the zooplankton community described for the period 2007-2009 by Mialet et al. (2011) has stabilized until present, and 2) to look for the environmental conditions favouring E. affinis development and causing changes in the upstream freshwater zooplankton community. The 2002-2012 temporal evolution of the zooplankton distribution at three stations in the upstream freshwater Scheldt estuary was analyzed. Water quality remained better after 2007 than before, and some factors revealed continuous improvement in annual mean concentrations (e.g. increase in O2, decrease in BOD5 and NH4sbnd N concentration). The increase in oxygen and the decrease in NH4sbnd N concentration, together with low discharge during summer were the main environmental factors explaining the development and timing of E. affinis in the upstream freshwater reach. In this reach, E. affinis maximal abundance is shifted to higher temperatures (summer) compared to its typical maximum spring abundance peak in the brackish zone of the Scheldt estuary and in most temperate estuaries. The changes in zooplankton community followed a temporal and spatial gradient induced by the spatio-temporal evolution of water quality improvement. The most downstream station (3) allowed E. affinis development (oxygen concentration > 4 mg L-1; NH4sbnd N concentration < 2 mg L-1, discharge (Q) < 50 m3 s-1) from 2007 onwards, and this station showed the highest E. affinis and the lowest cyclopoid abundance. At the more upstream stations E. affinis developed later and less strongly, and cyclopoids decreased less in abundance than at station 3. While there may be several explanations for the decrease in cyclopoid abundance (competitive grazing, high predation pressure, NH3sbnd N toxicity, sensitivity to oxygen, etc.), there is no clear cause for their decline. Water quality improvement in the freshwater Scheldt estuary has led to environmental, post-heavy polluted conditions, under which no data on zooplankton populations in this estuary were available. This has indicated a plasticity in the temperature tolerance of E. affinis.

Calculation and analysis of the non-point source pollution in the upstream watershed of the Panjiakou Reservoir, People's Republic of China

NASA Astrophysics Data System (ADS)

Zhang, S.; Tang, L.

2007-05-01

Panjiakou Reservoir is an important drinking water resource in Haihe River Basin, Hebei Province, People's Republic of China. The upstream watershed area is about 35,000 square kilometers. Recently, the water pollution in the reservoir is becoming more serious owing to the non-point pollution as well as point source pollution on the upstream watershed. To effectively manage the reservoir and watershed and develop a plan to reduce pollutant loads, the loading of non-point and point pollution and their distribution on the upstream watershed must be understood fully. The SWAT model is used to simulate the production and transportation of the non-point source pollutants in the upstream watershed of the Panjiakou Reservoir. The loadings of non-point source pollutants are calculated for different hydrologic years and the spatial and temporal characteristics of non-point source pollution are studied. The stream network and topographic characteristics of the stream network and sub-basins are all derived from the DEM by ArcGIS software. The soil and land use data are reclassified and the soil physical properties database file is created for the model. The SWAT model was calibrated with observed data of several hydrologic monitoring stations in the study area. The results of the calibration show that the model performs fairly well. Then the calibrated model was used to calculate the loadings of non-point source pollutants for a wet year, a normal year and a dry year respectively. The time and space distribution of flow, sediment and non-point source pollution were analyzed depending on the simulated results. The comparison of different hydrologic years on calculation results is dramatic. The loading of non-point source pollution in the wet year is relatively larger but smaller in the dry year since the non-point source pollutants are mainly transported through the runoff. The pollution loading within a year is mainly produced in the flood season. Because SWAT is a distributed model, it is possible to view model output as it varies across the basin, so the critical areas and reaches can be found in the study area. According to the simulation results, it is found that different land uses can yield different results and fertilization in rainy season has an important impact on the non- point source pollution. The limitations of the SWAT model are also discussed and the measures of the control and prevention of non- point source pollution for Panjiakou Reservoir are presented according to the analysis of model calculation results.

Investigating the size, shape and surface roughness dependence of polarization lidars with light-scattering computations on real mineral dust particles: Application to dust particles' external mixtures and dust mass concentration retrievals

NASA Astrophysics Data System (ADS)

Mehri, Tahar; Kemppinen, Osku; David, Grégory; Lindqvist, Hannakaisa; Tyynelä, Jani; Nousiainen, Timo; Rairoux, Patrick; Miffre, Alain

2018-05-01

Our understanding of the contribution of mineral dust to the Earth's radiative budget is limited by the complexity of these particles, which present a wide range of sizes, are highly-irregularly shaped, and are present in the atmosphere in the form of particle mixtures. To address the spatial distribution of mineral dust and atmospheric dust mass concentrations, polarization lidars are nowadays frequently used, with partitioning algorithms allowing to discern the contribution of mineral dust in two or three-component particle external mixtures. In this paper, we investigate the dependence of the retrieved dust backscattering (βd) vertical profiles with the dust particle size and shape. For that, new light-scattering numerical simulations are performed on real atmospheric mineral dust particles, having determined mineralogy (CAL, DOL, AGG, SIL), derived from stereogrammetry (stereo-particles), with potential surface roughness, which are compared to the widely-used spheroidal mathematical shape model. For each dust shape model (smooth stereo-particles, rough stereo-particles, spheroids), the dust depolarization, backscattering Ångström exponent, lidar ratio are computed for two size distributions representative of mineral dust after long-range transport. As an output, two Saharan dust outbreaks involving mineral dust in two, then three-component particle mixtures are studied with Lyon (France) UV-VIS polarization lidar. If the dust size matters most, under certain circumstances, βd can vary by approximately 67% when real dust stereo-particles are used instead of spheroids, corresponding to variations in the dust backscattering coefficient as large as 2 Mm- 1·sr- 1. Moreover, the influence of surface roughness in polarization lidar retrievals is for the first time discussed. Finally, dust mass-extinction conversion factors (ηd) are evaluated for each assigned shape model and dust mass concentrations are retrieved from polarization lidar measurements. From spheroids to stereo-particles, ηd increases by about 30%. We believe these results may be useful for our understanding of the spatial distribution of mineral dust contained in an aerosol external mixture and to better quantify dust mass concentrations from polarization lidar experiments.

Effects of high sound speed confiners on ANFO detonations

NASA Astrophysics Data System (ADS)

Kiyanda, Charles; Jackson, Scott; Short, Mark

2011-06-01

The interaction between high explosive (HE) detonations and high sound speed confiners, where the confiner sound speed exceeds the HE's detonation speed, has not been thoroughly studied. The subsonic nature of the flow in the confiner allows stress waves to travel ahead of the main detonation front and influence the upstream HE state. The interaction between the detonation wave and the confiner is also no longer a local interaction, so that the confiner thickness now plays a significant role in the detonation dynamics. We report here on larger scale experiments in which a mixture of ammonium nitrate and fuel oil (ANFO) is detonated in aluminium confiners with varying charge diameter and confiner thickness. The results of these large-scale experiments are compared with previous large-scale ANFO experiments in cardboard, as well as smaller-scale aluminium confined ANFO experiments, to characterize the effects of confiner thickness.

Flashback resistant pre-mixer assembly

DOEpatents

Laster, Walter R [Oviedo, FL; Gambacorta, Domenico [Oviedo, FL

2012-02-14

A pre-mixer assembly associated with a fuel supply system for mixing of air and fuel upstream from a main combustion zone in a gas turbine engine. The pre-mixer assembly includes a swirler assembly disposed about a fuel injector of the fuel supply system and a pre-mixer transition member. The swirler assembly includes a forward end defining an air inlet and an opposed aft end. The pre-mixer transition member has a forward end affixed to the aft end of the swirler assembly and an opposed aft end defining an outlet of the pre-mixer assembly. The aft end of the pre-mixer transition member is spaced from a base plate such that a gap is formed between the aft end of the pre-mixer transition member and the base plate for permitting a flow of purge air therethrough to increase a velocity of the air/fuel mixture exiting the pre-mixer assembly.

Multibiomarker responses in fish from the Moselle River (France).

PubMed

Flammarion, P; Devaux, A; Nehls, S; Migeon, B; Noury, P; Garric, J

2002-02-01

The response of wild fish to pollutants was studied using two biomarkers in chub (Leuciscus cephalus) at five stations in the Moselle River (France) in 1998 and in 1999. The induction of cytochrome P450 1A was quantified by the ethoxyresorufin O-deethylase (EROD) activity in the liver and the level of DNA single-strand breaks was determined in erythrocytes using the comet assay. EROD activity was observed to be up to 10-fold induced in both males and females from the downstream stations in comparison to the fish from the upstream station. Levels of DNA damage did not parallel EROD induction. Chemical analyses did not clearly explain the responses of the studied biomarkers, confirming the great difficulty in relating chemical and biological information in the field. This study confirms the difficulty in assessing the biological effects of mixtures of pollutants and points out the usefulness of a large array of biomarkers.

2-D and 3-D mixing flow analyses of a scramjet-afterbody configuration

NASA Technical Reports Server (NTRS)

Baysal, Oktay; Eleshaky, Mohamed E.; Engelund, Walter C.

1989-01-01

A cold simulant gas study of propulsion/airframe integration for a hypersonic vehicle powered by a scramjet engine is presented. The specific heat ratio of the hot exhaust gases are matched by utilizing a cold mixture of argon and Freon-12. Solutions are obtained for a hypersonic corner flow and a supersonic rectangular flow in order to provide the upstream boundary conditions. The computational test examples also provide a comparison of this flow with that of air as the expanding supersonic jet, where the specific heats are assumed to be constant. It is shown that the three-dimensional computational fluid capabilities developed for these types of flow may be utilized to augment the conventional wind tunnel studies of scramjet afterbody flows using cold simulant exhaust gases, which in turn can help in the design of a scramjet internal-external nozzle.

A Partial Least Squares Based Procedure for Upstream Sequence Classification in Prokaryotes.

PubMed

Mehmood, Tahir; Bohlin, Jon; Snipen, Lars

2015-01-01

The upstream region of coding genes is important for several reasons, for instance locating transcription factor, binding sites, and start site initiation in genomic DNA. Motivated by a recently conducted study, where multivariate approach was successfully applied to coding sequence modeling, we have introduced a partial least squares (PLS) based procedure for the classification of true upstream prokaryotic sequence from background upstream sequence. The upstream sequences of conserved coding genes over genomes were considered in analysis, where conserved coding genes were found by using pan-genomics concept for each considered prokaryotic species. PLS uses position specific scoring matrix (PSSM) to study the characteristics of upstream region. Results obtained by PLS based method were compared with Gini importance of random forest (RF) and support vector machine (SVM), which is much used method for sequence classification. The upstream sequence classification performance was evaluated by using cross validation, and suggested approach identifies prokaryotic upstream region significantly better to RF (p-value < 0.01) and SVM (p-value < 0.01). Further, the proposed method also produced results that concurred with known biological characteristics of the upstream region.

Identifying change in spatial accumulation of soil salinity in an inland river watershed, China.

PubMed

Wang, Yugang; Deng, Caiyun; Liu, Yan; Niu, Ziru; Li, Yan

2018-04-15

Soil salinity accumulation is strong in arid areas and it has become a serious environmental problem. Knowledge of the process and spatial changes of accumulated salinity in soil can provide an insight into the spatial patterns of soil salinity accumulation. This is especially useful for estimating the spatial transport of soil salinity at the watershed scale. This study aimed to identify spatial patterns of salt accumulation in the top 20cm soils in a typical inland watershed, the Sangong River watershed in arid northwest China, using geostatistics, spatial analysis technology and the Lorenz curve. The results showed that: (1) soil salt content had great spatial variability (coefficient variation >1.0) in both in 1982 and 2015, and about 56% of the studied area experienced transition the degree of soil salt content from one class to another during 1982-2015. (2) Lorenz curves describing the proportions of soil salinity accumulation (SSA) identified that the boundary between soil salinity migration and accumulation regions was 24.3m lower in 2015 than in 1982, suggesting a spatio-temporal inequality in loading of the soil salinity transport region, indicating significant migration of soil salinity from the upstream to the downstream watershed. (3) Regardless of migration or accumulation region, the mean value of SSA per unit area was 0.17kg/m 2 higher in 2015 than 1982 (p<0.01) and the increasing SSA per unit area in irrigated land significantly increased by 0.19kg/m 2 compared with the migration region. Dramatic accumulation of soil salinity in all land use types was clearly increased by 0.29kg/m 2 in this agricultural watershed during the studied period in the arid northwest of China. This study demonstrates the spatial patterns of soil salinity accumulation, which is particularly useful for estimating the spatial transport of soil salinity at the watershed scale. Copyright © 2017 Elsevier B.V. All rights reserved.

Influence of surface modification of halloysite nanotubes on their dispersion in epoxy matrix: Mesoscopic DPD simulation

NASA Astrophysics Data System (ADS)

Komarov, P.; Markina, A.; Ivanov, V.

2016-06-01

The problems of constructing of a meso-scale model of composites based on polymers and aluminosilicate nanotubes for prediction of the filler's spatial distribution at early stages of material formation have been considered. As a test system for the polymer matrix, the mixture of 3,4-epoxycyclohexylmethyl-3,4-epoxycyclohexanecarboxylate as epoxy resin monomers and 4-methylhexahydrophthalic anhydride as curing agent has been used. It is shown that the structure of a mixture of uncured epoxy resin and nanotubes is (mainly) determined by the surface functionalization of nanotubes. The results indicate that only nanotubes with maximum functionalization can preserve a uniform distribution in space.

Entorhinal-CA3 Dual-Input Control of Spike Timing in the Hippocampus by Theta-Gamma Coupling.

PubMed

Fernández-Ruiz, Antonio; Oliva, Azahara; Nagy, Gergő A; Maurer, Andrew P; Berényi, Antal; Buzsáki, György

2017-03-08

Theta-gamma phase coupling and spike timing within theta oscillations are prominent features of the hippocampus and are often related to navigation and memory. However, the mechanisms that give rise to these relationships are not well understood. Using high spatial resolution electrophysiology, we investigated the influence of CA3 and entorhinal inputs on the timing of CA1 neurons. The theta-phase preference and excitatory strength of the afferent CA3 and entorhinal inputs effectively timed the principal neuron activity, as well as regulated distinct CA1 interneuron populations in multiple tasks and behavioral states. Feedback potentiation of distal dendritic inhibition by CA1 place cells attenuated the excitatory entorhinal input at place field entry, coupled with feedback depression of proximal dendritic and perisomatic inhibition, allowing the CA3 input to gain control toward the exit. Thus, upstream inputs interact with local mechanisms to determine theta-phase timing of hippocampal neurons to support memory and spatial navigation. Copyright © 2017 Elsevier Inc. All rights reserved.

Kibra and Merlin Activate the Hippo Pathway Spatially Distinct from and Independent of Expanded.

PubMed

Su, Ting; Ludwig, Michael Z; Xu, Jiajie; Fehon, Richard G

2017-03-13

The Hippo pathway is emerging as a key evolutionarily conserved signaling mechanism that controls organ size. Three membrane-associated proteins, Kibra, Merlin, and Expanded, regulate pathway activity, but the precise molecular mechanism by which they function is still poorly understood. Here we provide evidence that Merlin and Kibra activate Hippo signaling in parallel to Expanded at a spatially distinct cellular domain, the medial apical cortex. Merlin and Kibra together recruit the adapter protein Salvador, which in turn recruits the core kinase Hippo. In addition, we show that Crumbs has a dual effect on Hippo signaling. Crumbs promotes the ability of Expanded to activate the pathway but also sequesters Kibra to downregulate Hippo signaling. Together, our findings elucidate the mechanism of Hippo pathway activation by Merlin and Kibra, identify a subcellular domain for Hippo pathway regulation, and demonstrate differential activity of upstream regulators in different subcellular domains. Copyright © 2017 Elsevier Inc. All rights reserved.

3D ion flow measurements and simulations near a boundary at oblique incidence to a magnetic field

NASA Astrophysics Data System (ADS)

Thompson, Derek S.; Keniley, Shane; Khaziev, Rinat; Curreli, Davide; Good, Timothy N.; Henriquez, Miguel; McIlvain, Julianne; Siddiqui, M. Umair; Scime, Earl E.

2016-10-01

Boundaries at oblique incidence to magnetic fields are abundant in magnetic confinement plasmas. The ion dynamics near these boundaries has implications for applications such as tokamak divertor wall loading and Hall thruster channel erosion. We present 3D, non-perturbative measurements of ion velocity distribution functions (IVDFs), providing ion temperatures and flows upstream of a grounded stainless steel limiter plate immersed in an argon plasma, oriented obliquely to the background axial magnetic field (ψ = 74°). The spatial resolution of the measurements is sufficient to probe the kinetic details of magnetic presheath structures, which span several ion Larmor radii ( 1 cm). Furthermore, we report probe measurements of electron density and temperature, and of local electric potential. To complement these measurements, results from particle-in-cell and Boltzmann models of the same region are presented. These models allow for point-to-point comparison of simulated and measured electrostatic structures and IVDFs at high spatial resolution. NSF Award PHYS-1360278.

Equivalence of internal and external mixture schemes of single scattering properties in vector radiative transfer

PubMed Central

Mukherjee, Lipi; Zhai, Peng-Wang; Hu, Yongxiang; Winker, David M.

2018-01-01

Polarized radiation fields in a turbid medium are influenced by single-scattering properties of scatterers. It is common that media contain two or more types of scatterers, which makes it essential to properly mix single-scattering properties of different types of scatterers in the vector radiative transfer theory. The vector radiative transfer solvers can be divided into two basic categories: the stochastic and deterministic methods. The stochastic method is basically the Monte Carlo method, which can handle scatterers with different scattering properties explicitly. This mixture scheme is called the external mixture scheme in this paper. The deterministic methods, however, can only deal with a single set of scattering properties in the smallest discretized spatial volume. The single-scattering properties of different types of scatterers have to be averaged before they are input to deterministic solvers. This second scheme is called the internal mixture scheme. The equivalence of these two different mixture schemes of scattering properties has not been demonstrated so far. In this paper, polarized radiation fields for several scattering media are solved using the Monte Carlo and successive order of scattering (SOS) methods and scattering media contain two types of scatterers: Rayleigh scatterers (molecules) and Mie scatterers (aerosols). The Monte Carlo and SOS methods employ external and internal mixture schemes of scatterers, respectively. It is found that the percentage differences between radiances solved by these two methods with different mixture schemes are of the order of 0.1%. The differences of Q/I, U/I, and V/I are of the order of 10−5 ~ 10−4, where I, Q, U, and V are the Stokes parameters. Therefore, the equivalence between these two mixture schemes is confirmed to the accuracy level of the radiative transfer numerical benchmarks. This result provides important guidelines for many radiative transfer applications that involve the mixture of different scattering and absorptive particles. PMID:29047543

TRACON Aircraft Arrival Planning and Optimization Through Spatial Constraint Satisfaction

NASA Technical Reports Server (NTRS)

Bergh, Christopher P.; Krzeczowski, Kenneth J.; Davis, Thomas J.; Denery, Dallas G. (Technical Monitor)

1995-01-01

A new aircraft arrival planning and optimization algorithm has been incorporated into the Final Approach Spacing Tool (FAST) in the Center-TRACON Automation System (CTAS) developed at NASA-Ames Research Center. FAST simulations have been conducted over three years involving full-proficiency, level five air traffic controllers from around the United States. From these simulations an algorithm, called Spatial Constraint Satisfaction, has been designed, coded, undergone testing, and soon will begin field evaluation at the Dallas-Fort Worth and Denver International airport facilities. The purpose of this new design is an attempt to show that the generation of efficient and conflict free aircraft arrival plans at the runway does not guarantee an operationally acceptable arrival plan upstream from the runway -information encompassing the entire arrival airspace must be used in order to create an acceptable aircraft arrival plan. This new design includes functions available previously but additionally includes necessary representations of controller preferences and workload, operationally required amounts of extra separation, and integrates aircraft conflict resolution. As a result, the Spatial Constraint Satisfaction algorithm produces an optimized aircraft arrival plan that is more acceptable in terms of arrival procedures and air traffic controller workload. This paper discusses the current Air Traffic Control arrival planning procedures, previous work in this field, the design of the Spatial Constraint Satisfaction algorithm, and the results of recent evaluations of the algorithm.

The importance of sand in the formation of avulsion channels within experimental fans that develop from sediment mixtures of mud and sand

NASA Astrophysics Data System (ADS)

Iscen, N.; Strom, K.

2017-12-01

Autogenic channel migration and avulsion has long been recognized as important drivers of alluvial fan dynamics. In the literature, several field studies have documented that the presence and the amount of sand transport through a channel is important for channel incision in alluvial fans and deltas. In our experiments, we present the general autogenic avulsion cycle of experimental alluvial fans with mixtures of cohesive sediment and sand with a range of boundary conditions, and we detail the importance of mobile sand fraction in the development of channels that lead to avulsion. Experimental observations demonstrate that new channels form at topographically low regions within the floodplain providing that sand is transported to these topographic lows due to overbank flow or levee breaching. In addition to the sediment transported from upstream, erosion of a previous deposit and an ongoing backfilling nearby are observed as the possible sources of sand getting into the ghost channels. We explore whether the presence of sand is important for channel development because it increases abrasion of the channel or because it changes the roughness characteristics of the flow. We also examine the affect of sediment and water supply change on the newly described channelization process and link distinctive channel morphologies to different stages of described channel development and the avulsion process.

National land-cover data and national agricultural census estimates of agricultural land use in the northeastern United States

USDA-ARS?s Scientific Manuscript database

The landscape of the northeastern United States is diverse and patchy, a complex mixture of forest, agriculture, and developed lands. Many urgent social and environmental issues require spatially-referenced information on land use, a need filled by the National Land-Cover Data (NLCD). The accuracy o...

Model forest landscape change in the Missouri Ozarks under alternative management practices

Treesearch

Stephen R. Shifley; Frank R. Thompson; David R. Larsen; William D. Dijak

2000-01-01

We used a spatially explicit landscape model, LANDIS, to simulate the effects of five management alternatives on a 3216 ha forest landscape in southeast Missouri, USA. We compared management alternatives among two intensities of even-aged management with clearcutting, uneven-aged management with group selection harvest, a mixture of even- and uneven-aged management,...

STABLE ISOTOPE VARIATIONS IN SUSPENDED PARTICLES IN A TEMPERATE NORTH PACIFIC ESTUARY, OREGON, USA

EPA Science Inventory

Spatial distributions of 13C and 15N in suspended particles were examined monthly over an annual cycle in the euphotic zone (0.5m) of the Yaquina River and Estuary, Oregon. Suspended organic matter in estuaries is a mixture of land-derived and oceanic carbon and nitrogen. In a...

Spatial dynamics of a nutrient-phytoplankton system with toxic effect on phytoplankton.

PubMed

Chakraborty, Subhendu; Tiwari, P K; Misra, A K; Chattopadhyay, J

2015-06-01

The production of toxins by some species of phytoplankton is known to have several economic, ecological, and human health impacts. However, the role of toxins on the spatial distribution of phytoplankton is not well understood. In the present study, the spatial dynamics of a nutrient-phytoplankton system with toxic effect on phytoplankton is investigated. We analyze the linear stability of the system and obtain the condition for Turing instability. In the presence of toxic effect, we find that the distribution of nutrient and phytoplankton becomes inhomogeneous in space and results in different patterns, like stripes, spots, and the mixture of them depending on the toxicity level. We also observe that the distribution of nutrient and phytoplankton shows spatiotemporal oscillation for certain toxicity level. Copyright © 2015 Elsevier Inc. All rights reserved.

Slanted snaking of localized Faraday waves

NASA Astrophysics Data System (ADS)

Pradenas, Bastián; Araya, Isidora; Clerc, Marcel G.; Falcón, Claudio; Gandhi, Punit; Knobloch, Edgar

2017-06-01

We report on an experimental, theoretical, and numerical study of slanted snaking of spatially localized parametrically excited waves on the surface of a water-surfactant mixture in a Hele-Shaw cell. We demonstrate experimentally the presence of a hysteretic transition to spatially extended parametrically excited surface waves when the acceleration amplitude is varied, as well as the presence of spatially localized waves exhibiting slanted snaking. The latter extend outside the hysteresis loop. We attribute this behavior to the presence of a conserved quantity, the liquid volume trapped within the meniscus, and introduce a universal model based on symmetry arguments, which couples the wave amplitude with such a conserved quantity. The model captures both the observed slanted snaking and the presence of localized waves outside the hysteresis loop, as demonstrated by numerical integration of the model equations.

75 FR 68714 - Final Flood Elevation Determinations

Federal Register 2010, 2011, 2012, 2013, 2014

2010-11-09

... mile +683 Village of Mayfield. upstream of Rogers Road. Chagrin River Approximately 40 feet +786 Village of Moreland upstream of Woodland Hills. Road. Approximately 1,200 feet +789 upstream of Woodland... Miles Road. Countrymans Creek Upstream of I-71......... +721 Village of Lindale. Downstream of Bellaire...

The 'upstream wake' of swimming and flying animals and its correlation with propulsive efficiency.

PubMed

Peng, Jifeng; Dabiri, John O

2008-08-01

The interaction between swimming and flying animals and their fluid environments generates downstream wake structures such as vortices. In most studies, the upstream flow in front of the animal is neglected. In this study, we demonstrate the existence of upstream fluid structures even though the upstream flow is quiescent or possesses a uniform incoming velocity. Using a computational model, the flow generated by a swimmer (an oscillating flexible plate) is simulated and a new fluid mechanical analysis is applied to the flow to identify the upstream fluid structures. These upstream structures show the exact portion of fluid that is going to interact with the swimmer. A mass flow rate is then defined based on the upstream structures, and a metric for propulsive efficiency is established using the mass flow rate and the kinematics of the swimmer. We propose that the unsteady mass flow rate defined by the upstream fluid structures can be used as a metric to measure and objectively compare the efficiency of locomotion in water and air.

Providing a Spatial Context for Crop Insurance in Ethiopia: Multiscale Comparisons of Vegetation Metrics in Tigray

NASA Astrophysics Data System (ADS)

Mann, B. F.; Small, C.

2014-12-01

Weather-based index insurance projects are rapidly expanding across the developing world. Many of these projects use satellite-based observations to detect extreme weather events, which inform and trigger payouts to smallholder farmers. While most index insurance programs use precipitation measurements to determine payouts, the use of remotely sensed observations of vegetation is currently being explored. In order to use vegetation indices as a basis for payouts, it is necessary to establish a consistent relationship between the vegetation index and the health and abundance of agriculture on the ground. The accuracy with which remotely sensed vegetation indices can detect changes in agriculture depends on both the spatial scale of the agriculture and the spatial resolution of the sensor. This study analyzes the relationship between meter and decameter scale vegetation fraction estimates derived from linear spectral mixture models with a more commonly used vegetation index (NDVI, EVI) at hectometer spatial scales. In addition, the analysis incorporates land cover/land use field observations collected in Tigray Ethiopia in July 2013. . It also tests the flexibility and utility of a standardized spectral mixture model in which land cover is represented as continuous fields of rock and soil substrate (S), vegetation (V) and dark surfaces (D; water, shadow). This analysis found strong linear relationships with vegetation metrics at 1.6-meter, 30-meter and 250-meter resolutions across spectrally diverse subsets of Tigray, Ethiopia and significantly correlated relationships using the Spearman's rho statistic. The observed linear scaling has positive implications for future use of moderate resolution vegetation indices in similar landscapes; especially index insurance projects that are scaling up across the developing world using remotely-sensed environmental information.

Multiscale imaging and characterization of the effect of mixing temperature on asphalt concrete containing recycled components.

PubMed

Cavalli, M C; Griffa, M; Bressi, S; Partl, M N; Tebaldi, G; Poulikakos, L D

2016-10-01

When producing asphalt concrete mixture with high amounts of reclaimed asphalt pavement (RAP), the mixing temperature plays a significant role in the resulting spatial distribution of the components as well as on the quality of the resulting mixture, in terms of workability during mixing and compaction as well as in service mechanical properties. Asphalt concrete containing 50% RAP was investigated at mixing temperatures of 140, 160 and 180°C, using a multiscale approach. At the microscale, using energy dispersive X-ray spectroscopy the RAP binder film thickness was visualized and measured. It was shown that at higher mixing temperatures this film thickness was reduced. The reduction in film thickness can be attributed to the loss of volatiles as well as the mixing of RAP binder with virgin binder at higher temperatures. X-ray computer tomography was used to characterize statistically the distribution of the RAP and virgin aggregates geometric features: volume, width and shape anisotropy. In addition using X-ray computer tomography, the packing and spatial distribution of the RAP and virgin aggregates was characterized using the nearest neighbour metric. It was shown that mixing temperature may have a positive effect on the spatial distribution of the aggregates but did not affect the packing. The study shows a tendency for the RAP aggregates to be more likely distributed in clusters at lower mixing temperatures. At higher temperatures, they were more homogeneously distributed. This indicates a higher degree of blending both at microscale (binder film) and macroscale (spatial distribution) between RAP and virgin aggregates as a result of increasing mixing temperatures and the ability to quantify this using various imaging techniques. © 2016 The Authors Journal of Microscopy © 2016 Royal Microscopical Society.

Mechanisms of flame stabilisation at low lifted height in a turbulent lifted slot-jet flame

DOE PAGES

Karami, Shahram; Hawkes, Evatt R.; Talei, Mohsen; ...

2015-07-23

A turbulent lifted slot-jet flame is studied using direct numerical simulation (DNS). A one-step chemistry model is employed with a mixture-fraction-dependent activation energy which can reproduce qualitatively the dependence of the laminar burning rate on the equivalence ratio that is typical of hydrocarbon fuels. The basic structure of the flame base is first examined and discussed in the context of earlier experimental studies of lifted flames. Several features previously observed in experiments are noted and clarified. Some other unobserved features are also noted. Comparison with previous DNS modelling of hydrogen flames reveals significant structural differences. The statistics of flow andmore » relative edge-flame propagation velocity components conditioned on the leading edge locations are then examined. The results show that, on average, the streamwise flame propagation and streamwise flow balance, thus demonstrating that edge-flame propagation is the basic stabilisation mechanism. Fluctuations of the edge locations and net edge velocities are, however, significant. It is demonstrated that the edges tend to move in an essentially two-dimensional (2D) elliptical pattern (laterally outwards towards the oxidiser, then upstream, then inwards towards the fuel, then downstream again). It is proposed that this is due to the passage of large eddies, as outlined in Suet al.(Combust. Flame, vol. 144 (3), 2006, pp. 494–512). However, the mechanism is not entirely 2D, and out-of-plane motion is needed to explain how flames escape the high-velocity inner region of the jet. Finally, the time-averaged structure is examined. A budget of terms in the transport equation for the product mass fraction is used to understand the stabilisation from a time-averaged perspective. The result of this analysis is found to be consistent with the instantaneous perspective. The budget reveals a fundamentally 2D structure, involving transport in both the streamwise and transverse directions, as opposed to possible mechanisms involving a dominance of either one direction of transport. Furthermore, it features upstream transport balanced by entrainment into richer conditions, while on the rich side, upstream turbulent transport and entrainment from leaner conditions balance the streamwise convection.« less

Thinking Upstream: A 25-Year Retrospective and Conceptual Model Aimed at Reducing Health Inequities.

PubMed

Butterfield, Patricia G

Thinking upstream was first introduced into the nursing vernacular in 1990 with the goal of advancing broad and context-rich perspectives of health. Initially invoked as conceptual framing language, upstream precepts were subsequently adopted and adapted by a generation of thoughtful nursing scholars. Their work reduced health inequities by redirecting actions further up etiologic pathways and by emphasizing economic, political, and environmental health determinants. US health care reform has fostered a much broader adoption of upstream language in policy documents. This article includes a semantic exploration of thinking upstream and a new model, the Butterfield Upstream Model for Population Health (BUMP Health).

Influence of host diversity on development of epidemics: an evaluation and elaboration of mixture theory.

PubMed

Skelsey, P; Rossing, W A H; Kessel, G J T; Powell, J; van der Werf, W

2005-04-01

ABSTRACT A spatiotemporal/integro-difference equation model was developed and utilized to study the progress of epidemics in spatially heterogeneous mixtures of susceptible and resistant host plants. The effects of different scales and patterns of host genotypes on the development of focal and general epidemics were investigated using potato late blight as a case study. Two different radial Laplace kernels and a two-dimensional Gaussian kernel were used for modeling the dispersal of spores. An analytical expression for the apparent infection rate, r, in general epidemics was tested by comparison with dynamic simulations. A genotype connectivity parameter, q, was introduced into the formula for r. This parameter quantifies the probability of pathogen inoculum produced on a certain host genotype unit reaching the same or another unit of the same genotype. The analytical expression for the apparent infection rate provided accurate predictions of realized r in the simulations of general epidemics. The relationship between r and the radial velocity of focus expansion, c, in focal epidemics, was linear in accordance with theory for homogeneous genotype mixtures. The findings suggest that genotype mixtures that are effective in reducing general epidemics of Phytophthora infestans will likewise curtail focal epidemics and vice versa.

Large-volume excitation of air, argon, nitrogen and combustible mixtures by thermal jets produced by nanosecond spark discharges

NASA Astrophysics Data System (ADS)

Stepanyan, Sergey; Hayashi, Jun; Salmon, Arthur; Stancu, Gabi D.; Laux, Christophe O.

2017-04-01

This work presents experimental observations of strong expanding thermal jets following the application of nanosecond spark discharges. These jets propagate in a toroidal shape perpendicular to the interelectrode axis, with high velocities of up to 30 m s-1 and over distances of the order of a cm. Their propagation length is much larger than the thermal expansion region produced by the conventional millisecond sparks used in car engine ignition, thus greatly improving the volumetric excitation of gas mixtures. The shape and velocity of the jets is found to be fairly insensitive to the shape of the electrodes. In addition, their spatial extent is found to increase with the number of nanosecond sparks and with the discharge voltage, and to decrease slightly with the pressure between 1 and 7 atm at constant applied voltage. Finally, this thermal jet phenomenon is observed in experiments conducted with many types of gas mixtures, including air, nitrogen, argon, and combustible CH4/air mixtures. This makes nanosecond repetitively pulsed discharges particularly attractive for aerodynamic flow control or plasma-assisted combustion because of their ability to excite large volumes of gas, typically about 100 times the volume of the discharge.

Ion solvation in polymer blends and block copolymer melts: effects of chain length and connectivity on the reorganization of dipoles.

PubMed

Nakamura, Issei

2014-05-29

We studied the thermodynamic properties of ion solvation in polymer blends and block copolymer melts and developed a dipolar self-consistent field theory for polymer mixtures. Our theory accounts for the chain connectivity of polymerized monomers, the compressibility of the liquid mixtures under electrostriction, the permanent and induced dipole moments of monomers, and the resultant dielectric contrast among species. In our coarse-grained model, dipoles are attached to the monomers and allowed to rotate freely in response to electrostatic fields. We demonstrate that a strong electrostatic field near an ion reorganizes dipolar monomers, resulting in nonmonotonic changes in the volume fraction profile and the dielectric function of the polymers with respect to those of simple liquid mixtures. For the parameter sets used, the spatial variations near an ion can be in the range of 1 nm or larger, producing significant differences in the solvation energy among simple liquid mixtures, polymer blends, and block copolymers. The solvation energy of an ion depends substantially on the chain length in block copolymers; thus, our theory predicts the preferential solvation of ions arising from differences in chain length.

Analysis of key thresholds leading to upstream dependencies in global transboundary water bodies

NASA Astrophysics Data System (ADS)

Munia, Hafsa Ahmed; Guillaume, Joseph; Kummu, Matti; Mirumachi, Naho; Wada, Yoshihide

2017-04-01

Transboundary water bodies supply 60% of global fresh water flow and are home to about 1/3 of the world's population; creating hydrological, social and economic interdependencies between countries. Trade-offs between water users are delimited by certain thresholds, that, when crossed, result in changes in system behavior, often related to undesirable impacts. A wide variety of thresholds are potentially related to water availability and scarcity. Scarcity can occur because of the country's own water use, and that is potentially intensified by upstream water use. In general, increased water scarcity escalates the reliance on shared water resources, which increases interdependencies between riparian states. In this paper the upstream dependencies of global transboundary river basins are examined at the scale of sub-basin areas. We aim to assess how upstream water withdrawals cause changes in the scarcity categories, such that crossing thresholds is interpreted in terms of downstream dependency on upstream water availability. The thresholds are defined for different types of water availability on which a sub-basin relies: - reliable local runoff (available even in a dry year), - less reliable local water (available in the wet year), - reliable dry year inflows from possible upstream area, and - less reliable wet year inflows from upstream. Possible upstream withdrawals reduce available water downstream, influencing the latter two water availabilities. Upstream dependencies have then been categorized by comparing a sub-basin's scarcity category across different water availability types. When population (or water consumption) grows, the sub-basin satisfies its needs using less reliable water. Thus, the factors affecting the type of water availability being used are different not only for each type of dependency category, but also possibly for every sub- basin. Our results show that, in the case of stress (impacts from high use of water), in 104 (12%) sub- basins out of 886 sub-basins are dependent on upstream water, while in the case of shortage (impacts from insufficient water availability per person), 79 (9%) sub-basins out of 886 sub-basins dependent on upstream water. Categorization of the upstream dependency of the sub-basins helps to differentiate between areas where i) there is currently no dependency on upstream water, ii) upstream water withdrawals are sufficiently high that they alter the scarcity and dependency status, and iii) which are always dependent on upstream water regardless of upstream water withdrawals. Our dependency assessment is expected to considerably support the studies and discussions of hydro-political power relations and management practices in transboundary basins.

Quantitative evaluation of bone-mineral density loss using X-ray coherent scattering

NASA Astrophysics Data System (ADS)

Barroso, Regina Cély; Oliveira, Luis Fernando; Castro, Carlos Roberto Ferreira; Lima, João Carlos; Braz, Delson; Lopes, Ricardo Tadeu; Droppa, Roosevel; Tromba, Giuliana; Mancini, Lucia; Zanini, Franco; Rigon, Luigi; Dreossi, Diego

2007-08-01

In this work, we intend to relate the mineral to non-mineral bone scattering intensity ratio with the bone-mineral density (BMD) reduction. In this way, EDXRD can be a novel technique to measure BMD loss in function of the mineral and non-mineral scattering intensity. The scattering profiles were obtained at Laboratório Nacional de Luz Síncrotron (LNLS) at the X-ray diffraction beamline XD2. A double-crystal Si(1 1 1) pre-monochromator, upstream of the beamline, was used to select a small energy bandwidth (Δ λ/ λ≈10 -4) at 11 keV. The sample holder has a circle depression in the center to contain a range of bone and fat mixture ratios. The mixture consists of powdered cortical bone and fat, which together simulate in vivo bone. The diffraction patterns were carried out with 0.5 mm slits after and behind of the sample holder. The data were collected in 0.05° increments every 0.5 s. EDXRD results show an indication of different bone densities may be distinguished which suggested that X-ray coherent scattering technique may have a role in monitoring changes in BMD via changes in the related scattering intensity of mineral and non-mineral bone. The main aim of the Synchrotron Radiation for MEdical Physics (SYRMEP) project at the ELETTRA is the investigation and the development of innovative techniques for medical imaging. The beamline provides, at a distance of about 23 m from the source, a monochromatic, laminar section X-ray beam with a maximum area of about 160×5 mm 2 at 20 keV. The monochromator, that covers the entire angular acceptance of the beamline, is based on a double-Si (1 1 1) crystal system working in Bragg configuration. A micrometric vertical and horizontal translation stage allows the positioning and scanning of the sample with respect to the stationary beam. In this case, the detector is kept stationary in front of the beam, while the object is rotated in discrete steps in front of it. At each rotation, a projection is acquired. A goniometric double-cradle system is used to adjust the rotation axis, which must be orthogonal with respect to the detector plane in transmission computed tomography (CT). The samples consisted of a 8 mm cube of bovine bone surrounded of a cartilage interface. High-resolution images of the trabecular structure were obtained by means a 16-bit CCD camera, 2048×2048 pixels, 14 μm pixel size (maximum spatial resolution: 25 μm).

Time scales of circulation and mixing processes of San Francisco Bay waters

USGS Publications Warehouse

Walters, R.A.; Cheng, R.T.; Conomos, T.J.

1985-01-01

Conceptual models for tidal period and low-frequency variations in sea level, currents, and mixing processes in the northern and southern reaches of San Francisco Bay describe the contrasting characteristics and dissimilar processes and rates in these embayments: The northern reach is a partially mixed estuary whereas the southern reach (South Bay) is a tidally oscillating lagoon with density-driven exchanges with the northern reach. The mixed semidiurnal tides are mixtures of progressive and standing waves. The relatively simple oscillations in South Bay are nearly standing waves, with energy propagating down the channels and dispersing into the broad shoal areas. The tides of the northern reach have the general properties of a progressive wave but are altered at the constriction of the embayments and gradually change in an upstream direction to a mixture of progressive and standing waves. The spring and neap variations of the tides are pronounced and cause fortnightly varying tidal currents that affect mixing and salinity stratification in the water column. Wind stress on the water surface, freshwater inflow, and tidal currents interacting with the complex bay configuration are the major local forcing mechanisms creating low-frequency variations in sea level and currents. These local forcing mechanisms drive the residual flows which, with tidal diffusion, control the water-replacement rates in the estuary. In the northern reach, the longitudinal density gradient drives an estuarine circulation in the channels, and the spatial variation in tidal amplitude creates a tidally-driven residual circulation. In contrast, South Bay exhibits a balance between wind-driven circulation and tidally-driven residual circulation for most of the year. During winter, however, there can be sufficient density variations to drive multilayer (2 to 3) flows in the channel of South Bay. Mixing models (that include both diffusive and dispersive processes) are based on time scales associated with salt variations at the boundaries and those associated with the local forcing mechanisms, while the spatial scales of variations are dependent upon the configuration of the embayments. In the northern reach, where the estuarine circulation is strong, the salt flux is carried by the mean advection of the mean salt field. Where large salinity gradients are present, the tidal correlation part of the salt flux is of the same order as the advective part. Our knowledge of mixing and exchange rates in South Bay is poor. As this embayment is nearly isohaline, the salt flux is dominated entirely by the mean advection of the mean salt field. During and after peaks in river discharge, water mixing becomes more dynamic, with a strong density-driven current creating a net exchange of both water mass and salt. These exchanges are stronger during neap tides. Residence times of the water masses vary seasonally and differ between reaches. In the northern reach, residence times are on the order of days for high winter river discharge and of months for summer periods. The residence times for South Bay are fairly long (on the order of several months) during summer, and typically shorter (less than a month) during winter when density-driven exchanges occur. ?? 1985 Dr W. Junk Publishers.

Image segmentation using hidden Markov Gauss mixture models.

PubMed

Pyun, Kyungsuk; Lim, Johan; Won, Chee Sun; Gray, Robert M

2007-07-01

Image segmentation is an important tool in image processing and can serve as an efficient front end to sophisticated algorithms and thereby simplify subsequent processing. We develop a multiclass image segmentation method using hidden Markov Gauss mixture models (HMGMMs) and provide examples of segmentation of aerial images and textures. HMGMMs incorporate supervised learning, fitting the observation probability distribution given each class by a Gauss mixture estimated using vector quantization with a minimum discrimination information (MDI) distortion. We formulate the image segmentation problem using a maximum a posteriori criteria and find the hidden states that maximize the posterior density given the observation. We estimate both the hidden Markov parameter and hidden states using a stochastic expectation-maximization algorithm. Our results demonstrate that HMGMM provides better classification in terms of Bayes risk and spatial homogeneity of the classified objects than do several popular methods, including classification and regression trees, learning vector quantization, causal hidden Markov models (HMMs), and multiresolution HMMs. The computational load of HMGMM is similar to that of the causal HMM.

Spatio-temporal Bayesian model selection for disease mapping

PubMed Central

Carroll, R; Lawson, AB; Faes, C; Kirby, RS; Aregay, M; Watjou, K

2016-01-01

Spatio-temporal analysis of small area health data often involves choosing a fixed set of predictors prior to the final model fit. In this paper, we propose a spatio-temporal approach of Bayesian model selection to implement model selection for certain areas of the study region as well as certain years in the study time line. Here, we examine the usefulness of this approach by way of a large-scale simulation study accompanied by a case study. Our results suggest that a special case of the model selection methods, a mixture model allowing a weight parameter to indicate if the appropriate linear predictor is spatial, spatio-temporal, or a mixture of the two, offers the best option to fitting these spatio-temporal models. In addition, the case study illustrates the effectiveness of this mixture model within the model selection setting by easily accommodating lifestyle, socio-economic, and physical environmental variables to select a predominantly spatio-temporal linear predictor. PMID:28070156

Catalytic Ignition and Upstream Reaction Propagation in a Platinum Tube

NASA Technical Reports Server (NTRS)

Struk, P. M.; Dietrich, D. L.; Mellish, B. P.; Miller, F. J.; T'ien, J. S.

2007-01-01

A challenge for catalytic combustion in monolithic reactors at elevated temperatures is the start-up or "light-off" from a cold initial condition. In this work, we demonstrate a concept called "back-end catalytic ignition that potentially can be utilized in the light-off of catalytic monoliths. An external downstream flame or Joule heating raises the temperature of a small portion of the catalyst near the outlet initiating a localized catalytic reaction that propagates upstream heating the entire channel. This work uses a transient numerical model to demonstrate "back-end" ignition within a single channel which can characterize the overall performance of a monolith. The paper presents comparisons to an experiment using a single non-adiabatic channel but the concept can be extended to the adiabatic monolith case. In the model, the time scales associated with solid heat-up are typically several orders of magnitude larger than the gas-phase and chemical kinetic time-scales. Therefore, the model assumes a quasi-steady gas-phase with respect to a transient solid. The gas phase is one-dimensional. Appropriate correlations, however, account for heat and mass transfer in a direction perpendicular to the flow. The thermally-thin solid includes axial conduction. The gas phase, however, does not include axial conduction due to the high Peclet number flows. The model includes both detailed gas-phase and catalytic surface reactions. The experiment utilizes a pure platinum circular channel oriented horizontally though which a CO/O2 mixture (equivalence ratios ranging from 0.6 to 0.9) flows at 2 m/s.

Precursor detonation wave development in ANFO due to aluminum confinement

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jackson, Scott I; Klyanda, Charles B; Short, Mark

2010-01-01

Detonations in explosive mixtures of ammonium-nitrate-fuel-oil (ANFO) confined by aluminum allow for transport of detonation energy ahead of the detonation front due to the aluminum sound speed exceeding the detonation velocity. The net effect of this energy transport on the detonation is unclear. It could enhance the detonation by precompressing the explosive near the wall. Alternatively, it could decrease the explosive performance by crushing porosity required for initiation by shock compression or destroying confinement ahead of the detonation. At present, these phenomena are not well understood. But with slowly detonating, non-ideal high explosive (NIHE) systems becoming increasing prevalent, proper understandingmore » and prediction of the performance of these metal-confined NIHE systems is desirable. Experiments are discussed that measured the effect of this ANFO detonation energy transported upstream of the front by a 76-mm-inner-diameter aluminum confining tube. Detonation velocity, detonation-front shape, and aluminum response are recorded as a function of confiner wall thickness and length. Detonation shape profiles display little curvature near the confining surface, which is attributed to energy transported upstream modifying the flow. Average detonation velocities were seen to increase with increasing confiner thickness, while wavefront curvature decreased due to the stiffer, subsonic confinement. Significant radial sidewall tube motion was observed immediately ahead of the detonation. Axial motion was also detected, which interfered with the front shape measurements in some cases. It was concluded that the confiner was able to transport energy ahead of the detonation and that this transport has a definite effect on the detonation by modifying its characteristic shape.« less

Evaluation of a semi-distributed model through an assessment of the spatial coherence of Intercatchment Groundwater Flows

NASA Astrophysics Data System (ADS)

de Lavenne, Alban; Thirel, Guillaume; Andréassian, Vazken; Perrin, Charles; Ramos, Maria-Helena

2016-04-01

Semi-distributed hydrological models aim to provide useful information to understand and manage the spatial distribution of water resources. However, their evaluation is often limited to independent and single evaluations at each sub-catchment within larger catchments. This enables to qualify model performance at different points, but does not provide a coherent assessment of the overall spatial consistency of the model. To cope with these methodological deficiencies, we propose a two-step strategy. First, we apply a sequential spatial calibration procedure to define spatially consistent model parameters. Secondly, we evaluate the hydrological simulations using variables that involve some dependency between sub-catchments to evaluate the overall coherence of model outputs. In this study, we particularly choose to look at the simulated Intercatchment Groundwater Flows (IGF). The idea is that the water that is lost in one place should be recovered somewhere else within the catchment to guarantee a spatially coherent water balance in time. The model used is a recently developed daily semi-distributed model, which is based on a spatial distribution of the lumped GR5J model. The model has five parameters for each sub-catchments and a streamflow velocity parameter for flow routing between them. It implements two reservoirs, one for production and one for routing, and estimates IGF according to the level of the second in a way that catchment can release water to IGF during high flows and receive water through IGF during low flows. The calibration of the model is performed from upstream to downstream, making an efficient use of spatially distributed streamflow measurements. To take model uncertainty into account, we implemented three variants of the original model structure, each one computing in a different way the IGF in each sub-catchment. The study is applied on over 1000 catchments in France. By exploring a wide area and a variability of hydrometeorological conditions, we aim to detect IGF even between catchments which can be quite distant from one another.

Systematic developmental neurotoxicity assessment of a representative PAH Superfund mixture using zebrafish.

PubMed

Geier, Mitra C; James Minick, D; Truong, Lisa; Tilton, Susan; Pande, Paritosh; Anderson, Kim A; Teeguardan, Justin; Tanguay, Robert L

2018-04-06

Superfund sites often consist of complex mixtures of polycyclic aromatic hydrocarbons (PAHs). It is widely recognized that PAHs pose risks to human and environmental health, but the risks posed by exposure to PAH mixtures are unclear. We constructed an environmentally relevant PAH mixture with the top 10 most prevalent PAHs (SM10) from a Superfund site derived from environmental passive sampling data. Using the zebrafish model, we measured body burden at 48 hours post fertilization (hpf) and evaluated the developmental and neurotoxicity of SM10 and the 10 individual constituents at 24 hours post fertilization (hpf) and 5 days post fertilization (dpf). Zebrafish embryos were exposed from 6 to 120 hpf to (1) the SM10 mixture, (2) a variety of individual PAHs: pyrene, fluoranthene, retene, benzo[a]anthracene, chrysene, naphthalene, acenaphthene, phenanthrene, fluorene, and 2-methylnaphthalene. We demonstrated that SM10 and only 3 of the individual PAHs were developmentally toxic. Subsequently, we constructed and exposed developing zebrafish to two sub-mixtures: SM3 (comprised of 3 of the developmentally toxicity PAHs) and SM7 (7 non-developmentally toxic PAHs). We found that the SM3 toxicity profile was similar to SM10, and SM7 unexpectedly elicited developmental toxicity unlike that seen with its individual components. The results demonstrated that the overall developmental toxicity in the mixtures could be explained using the general concentration addition model. To determine if exposures activated the AHR pathway, spatial expression of CYP1A was evaluated in the 10 individual PAHs and the 3 mixtures at 5 dpf. Results showed activation of AHR in the liver and vasculature for the mixtures and some individual PAHs. Embryos exposed to SM10 during development and raised in chemical-free water into adulthood exhibited decreased learning and responses to startle stimulus indicating that developmental SM10 exposures affect neurobehavior. Collectively, these results exemplify the utility of zebrafish to investigate the developmental and neurotoxicity of complex mixtures. Copyright © 2018 Elsevier Inc. All rights reserved.

Prioritizing conservation activities using reserve site selection methods and population viability analysis.

PubMed

Newbold, Stephen C; Siikamäki, Juha

2009-10-01

In recent years a large literature on reserve site selection (RSS) has developed at the interface between ecology, operations research, and environmental economics. Reserve site selection models use numerical optimization techniques to select sites for a network of nature reserves for protecting biodiversity. In this paper, we develop a population viability analysis (PVA) model for salmon and incorporate it into an RSS framework for prioritizing conservation activities in upstream watersheds. We use spawner return data for three closely related salmon stocks in the upper Columbia River basin and estimates of the economic costs of watershed protection from NOAA to illustrate the framework. We compare the relative cost-effectiveness of five alternative watershed prioritization methods, based on various combinations of biological and economic information. Prioritization based on biological benefit-economic cost comparisons and accounting for spatial interdependencies among watersheds substantially outperforms other more heuristic methods. When using this best-performing prioritization method, spending 10% of the cost of protecting all upstream watersheds yields 79% of the biological benefits (increase in stock persistence) from protecting all watersheds, compared to between 20% and 64% for the alternative methods. We also find that prioritization based on either costs or benefits alone can lead to severe reductions in cost-effectiveness.

Diet of juvenile and adult American Shad in the Columbia River

USGS Publications Warehouse

Sauter, Sally T.; Blubaugh, J; Parsley, Michael J.

2011-01-01

The diet of juvenile and adult American shad Alosa sapidissima captured from various locations in the Columbia River was investigated during 2007 and 2008. Collection efforts in 2007 were restricted to fish collected from existing adult and juvenile fish collection facilities located at Bonneville Dam and to adult shad captured by angling downstream from Bonneville Dam. In 2008, we used gillnets, electrofishing, beach seining, or cast nets to collect juvenile and adult shad from the saline estuary near Astoria (approximately river km 24) to just upstream from McNary Dam (approximately river km 472). We examined the stomach contents of 436 American shad captured in 2007 and 1,272 captured in 2008. Fish caught within the river were much more likely to contain food items than fish removed from fish collection facilities.

The diet of age-0 American shad varied spatially and temporally, but was comprised primarily of crustaceans and insects. Prey diversity of age-0 American shad, as assessed by the Shannon Diversity Index, increased with decreasing distance to the estuary. Pre- and partial-spawn American shad primarily consumed Corophium spp. throughout the Columbia River; however, post-spawn adults primarily consumed gastropods upstream of McNary Dam

On the role of acoustic feedback in boundary-layer instability.

PubMed

Wu, Xuesong

2014-07-28

In this paper, the classical triple-deck formalism is employed to investigate two instability problems in which an acoustic feedback loop plays an essential role. The first concerns a subsonic boundary layer over a flat plate on which two well-separated roughness elements are present. A spatially amplifying Tollmien-Schlichting (T-S) wave between the roughness elements is scattered by the downstream roughness to emit a sound wave that propagates upstream and impinges on the upstream roughness to regenerate the T-S wave, thereby forming a closed feedback loop in the streamwise direction. Numerical calculations suggest that, at high Reynolds numbers and for moderate roughness heights, the long-range acoustic coupling may lead to absolute instability, which is characterized by self-sustained oscillations at discrete frequencies. The dominant peak frequency may jump from one value to another as the Reynolds number, or the distance between the roughness elements, is varied gradually. The second problem concerns the supersonic 'twin boundary layers' that develop along two well-separated parallel flat plates. The two boundary layers are in mutual interaction through the impinging and reflected acoustic waves. It is found that the interaction leads to a new instability that is absent in the unconfined boundary layer. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

Modeling migratory energetics of Connecticut River American shad (Alosa sapidissima): implications for the conservation of an iteroparous anadromous fish

USGS Publications Warehouse

Castro-Santos, Theodore; Letcher, Benjamin H.

2010-01-01

We present a simulation model in which individual adult migrant American shad (Alosa sapidissima) ascend the Connecticut River and spawn, and survivors return to the marine environment. Our approach synthesizes bioenergetics, reproductive biology, and behavior to estimate the effects of migratory distance and delays incurred at dams on spawning success and survival. We quantified both the magnitude of effects and the consequences of uncertainty in the estimates of input variables. Behavior, physiology, and energetics strongly affected both the distribution of spawning effort and survival to the marine environment. Delays to both upstream and downstream movements had dramatic effects on spawning success, determining total fecundity and spatial extent of spawning. Delays, combined with cues for migratory reversal, also determined the likelihood of survival. Spawning was concentrated in the immediate vicinity of dams and increased with greater migratory distance and delays to downstream migration. More research is needed on reproductive biology, behavior, energetics, and barrier effects to adequately understand the interplay of the various components of this model; it does provide a framework, however, that suggests that provision of upstream passage at dams in the absence of expeditious downstream passage may increase spawning success — but at the expense of reduced iteroparity. 

Hyperspectral Proximal Sensing of Salix Alba Trees in the Sacco River Valley (Latium, Italy)

PubMed Central

Moroni, Monica; Lupo, Emanuela; Cenedese, Antonio

2013-01-01

Recent developments in hardware and software have increased the possibilities and reduced the costs of hyperspectral proximal sensing. Through the analysis of high resolution spectroscopic measurements at the laboratory or field scales, this monitoring technique is suitable for quantitative estimates of biochemical and biophysical variables related to the physiological state of vegetation. Two systems for hyperspectral imaging have been designed and developed at DICEA-Sapienza University of Rome, one based on the use of spectrometers, the other on tunable interference filters. Both systems provide a high spectral and spatial resolution with low weight, power consumption and cost. This paper describes the set-up of the tunable filter platform and its application to the investigation of the environmental status of the region crossed by the Sacco river (Latium, Italy). This was achieved by analyzing the spectral response given by tree samples, with roots partly or wholly submerged in the river, located upstream and downstream of an industrial area affected by contamination. Data acquired is represented as reflectance indices as well as reflectance values. Broadband and narrowband indices based on pigment content and carotenoids vs. chlorophyll content suggest tree samples located upstream of the contaminated area are ‘healthier’ than those downstream. PMID:24172281

Control of the actin cytoskeleton in root hair development.

PubMed

Pei, Weike; Du, Fei; Zhang, Yi; He, Tian; Ren, Haiyun

2012-05-01

The development of root hair includes four stages: bulge site selection, bulge formation, tip growth, and maturation. The actin cytoskeleton is involved in all of these stages and is organized into distinct arrangements in the different stages. In addition to the actin configuration, actin isoforms also play distinct roles in the different stages. The actin cytoskeleton is regulated by actin-binding proteins, such as formin, Arp2/3 complex, profilin, actin depolymerizing factor, and villin. Some upstream signals, i.e. calcium, phospholipids, and small GTPase regulate the activity of these actin-binding proteins to produce the proper actin configuration. We constructed a working model on how the actin cytoskeleton is controlled by actin-binding proteins and upstream signaling in root hair development based on the current literature: at the tip of hairs, actin polymerization appears to be facilitated by Arp2/3 complex that is activated by small GTPase, and profilin that is regulated by phosphatidylinositol 4,5-bisphosphate. Meanwhile, actin depolymerization and turnover are likely mediated by villin and actin depolymerizing factor, which are stimulated by calcium. At the shank, actin cables are produced by formin and villin. Under the complicated interaction, the actin cytoskeleton is controlled spatially and temporally during root hair development. © 2012 Elsevier Ireland Ltd. All rights reserved.

Modeling hydraulic and sediment transport processes in white sturgeon spawning habitat on the Kootenai River, Idaho

USGS Publications Warehouse

McDonald, Richard R.; Nelson, Jonathan M.; Vaughn Paragamian,; Barton, Gary J.

2017-01-01

The Kootenai River white sturgeon currently spawn (2005) in an 18-kilometer reach of the Kootenai River, Idaho. Since completion of Libby Dam upstream from the spawning reach, there has been only one successful year of recruitment of juvenile fish. Where successful in other rivers, white sturgeon spawn over clean coarse material of gravel size or larger. The channel substrate in the current spawning reach is composed primarily of sand and some buried gravel; within a few kilometers upstream there is clean gravel. We used a 2-dimensional flow and sediment-transport model and the measured locations of sturgeon spawning from 1994-2002 to gain insight into the paradox between the current spawning location and the absence of suitable substrate. Spatial correlations between spawning locations and the model simulations of velocity and depth indicate the white sturgeon tend to select regions of highest velocity and depth within any river cross-section to spawn. These regions of high velocity and depth are independent of pre- or post-dam flow conditions. A simple sediment-transport simulation suggests that high discharge and relatively long duration flow associated with pre-dam flow events might be sufficient to scour the sandy substrate and expose existing lenses of gravel and cobble as lag deposits in the current spawning reach.

How a stationary knickpoint is sustained: New insights into the formation of the deep Yarlung Tsangpo Gorge

NASA Astrophysics Data System (ADS)

Wang, Yizhou; Zhang, Huiping; Zheng, Dewen; von Dassow, Wesley; Zhang, Zhuqi; Yu, Jingxing; Pang, Jianzhang

2017-05-01

In order to test the hypothesis that the stationary nature of the Yarlung Tsangpo Gorge is tectonically controlled, the rock uplift pattern in the southeast Tibetan Plateau and the critical condition to sustain a stable knickpoint must be derived. Via slope-area analysis and the integral approach, we first quantify the pattern of channel steepness in southeast Tibet and find that the steepness index shows higher values around the gorge but lower values toward the inner land and the mountain front. Such a pattern of channel steepness indicates that the active rock uplift is restricted in the zone just around the Yarlung Tsangpo Gorge. Then, we derive a general knickpoint migration model that accounts for spatially variant rock uplift rates. From the model, a critical condition for maintaining a stable knickpoint is concluded that the difference of incision rates in the downstream and upstream reaches of the knickpoint should match that of rock uplift. Employing a stream-power river incision model, we calculate the incision rate in the gorge and find a higher correspondence with differential rock uplift rates in the downstream and upstream reaches of the knickpoint. Therefore, we favor tectonic control as the primary mechanism to explain the stability of the knickpoint within the Yarlung Tsangpo Gorge.

Spectral properties of Langmuir and beam-mode waves observed inside terrestrial foreshock by Cluster spacecraf

NASA Astrophysics Data System (ADS)

Pisa, D.; Soucek, J.; Santolik, O.

2016-12-01

Electrostatic plasma waves are commonly observed in the upstream regions of planetary shocks. Solar wind electrons accelerated at the shock front are reflected back into the solar wind and form electron beams. The electron distribution becomes unstable and electrostatic waves are generated inside the foreshock region. The processes of generation and evolution of electrostatic waves significantly depend on the solar wind plasma conditions and generally exhibit complex behavior. Langmuir waves can be identified as intense narrowband emission at the local plasma frequency and weaker broadband beam-mode waves below and above the plasma frequency deeper in the downstream region. We present a long-term survey of Langmuir and beam-mode waves in the vicinity of the plasma frequency observed upstream of the terrestrial bow shock by the Cluster spacecraft. Using solar wind data and bow shock positions from OMNI, as well as in-situ measurements of interplanetary magnetic field, we have mapped all available spacecraft positions into foreshock coordinates. For a study of plasma waves, we have used spectra and local plasma frequencies obtained from a passive and active mode of the WHISPER instrument. We show a spatial distribution of wave frequencies and spectral widths as a function of foreshock positions and solar wind conditions.

The Quasi-monochromatic ULF Wave Boundary in the Venusian Foreshock: Venus Express Observations

NASA Astrophysics Data System (ADS)

Shan, Lican; Mazelle, Christian; Meziane, Karim; Romanelli, Norberto; Ge, Yasong S.; Du, Aimin; Lu, Quanming; Zhang, Tielong

2018-01-01

The location of ultralow-frequency (ULF) quasi-monochromatic wave onset upstream of Venus bow shock is explored using Venus Express magnetic field data. We report the existence of a spatial foreshock boundary behind which ULF waves are present. We have found that the ULF wave boundary at Venus is sensitive to the interplanetary magnetic field (IMF) direction like the terrestrial one and appears well defined for a cone angle larger than 30°. In the Venusian foreshock, the inclination angle of the wave boundary with respect to the Sun-Venus direction increases with the IMF cone angle. We also found that for the IMF nominal direction (θBX = 36°) at Venus' orbit, the value of this inclination angle is 70°. Moreover, we have found that the inferred velocity of an ion traveling along the ULF boundary is in a qualitative agreement with a quasi-adiabatic reflection of a portion of the solar wind at the bow shock. For an IMF nominal direction at Venus, the inferred bulk speed of ions traveling along this boundary is 1.07 VSW, sufficiently enough to overcome the solar wind convection. This strongly suggests that the backstreaming ions upstream of the Venusian bow shock provide the main energy source for the ULF waves.

Assessment of Surface Water Contamination from Coalbed Methane Fracturing-Derived Volatile Contaminants in Sullivan County, Indiana, USA.

PubMed

Meszaros, Nicholas; Subedi, Bikram; Stamets, Tristan; Shifa, Naima

2017-09-01

There is a growing concern over the contamination of surface water and the associated environmental and public health consequences from the recent proliferation of hydraulic fracturing in the USA. Petroleum hydrocarbon-derived contaminants of concern [benzene, toluene, ethylbenzene, and xylenes (BTEX)] and various dissolved cations and anions were spatially determined in surface waters around 15 coalbed methane fracking wells in Sullivan County, IN, USA. At least one BTEX compound was detected in 69% of sampling sites (n = 13) and 23% of sampling sites were found to be contaminated with all of the BTEX compounds. Toluene was the most common BTEX compound detected across all sampling sites, both upstream and downstream from coalbed methane fracking wells. The average concentration of toluene at a reservoir and its outlet nearby the fracking wells was ~2× higher than other downstream sites. However, one of the upstream sites was found to be contaminated with BTEX at similar concentrations as in a reservoir site nearby the fracking well. Calcium (~60 ppm) and sulfates (~175 ppm) were the dominant cations and anions, respectively, in surface water around the fracking sites. This study represents the first report of BTEX contamination in surface water from coalbed methane hydraulic fracturing wells.

Simulating the Reiner Gamma Lunar Swirl: Influence of the Upstream Plasma Conditions

NASA Astrophysics Data System (ADS)

Deca, J.; Gerard, M. J.; Divin, A. V.; Lue, C.; Ahmadi, T.; Lembege, B.; Horanyi, M.

2017-12-01

The Reiner Gamma swirl formation, co-located with one of our Moon's strongest crustal magnetic anomalies, is one of the most prominent lunar surface features. Due to Reiner Gamma's fairly moderate spatial scales, it presents an ideal test case to study the solar wind interaction with its magnetic topology from an ion-electron kinetic perspective. Using a fully kinetic particle-in-cell approach, coupled with a surface vector mapping magnetic field model based on Kaguya and Lunar Prospector observations, we are able to constrain both the reflected as well as the incident flux patterns to the lunar surface. Finding excellent agreement with the in-orbit flux measurements from the SARA:SWIM ion sensor onboard the Chandrayaan-1 spacecraft and the surface albedo images from the Lunar Reconnaissance Orbiter Wide Angle Camera we conclude that (from a pure plasma physics point of view) that solar wind standoff is a viable mechanism for the formation of lunar swirls. Here we show how the reflected and incident flux patterns change under influence of the upstream plasma and magnetic field conditions. The possible consequences of crustal magnetic anomalies for lunar swirl formation are essential for the interpretation of our Moon's geological history and evolution, space weathering, and to evaluate the needs and targets for future lunar exploration opportunities.

Imaging of spatial distributions of the millimeter wave intensity by using visible continuum radiation from a discharge in a Cs–Xe mixture. Part I: Review of the method and its fundamentals

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gitlin, M. S., E-mail: gitlin@appl.sci-nnov.ru

The first part of the review is presented which is dedicated to the time-resolved method of imaging and measuring the spatial distribution of the intensity of millimeter waves by using visible continuum (VC) emitted by the positive column (PC) of a dc discharge in a mixture of cesium vapor with xenon. The review focuses on the operating principles, fundamentals, and applications of this new technique. The design of the discharge tube and experimental setup used to create a wide homogeneous plasma slab with the help of the Cs–Xe discharge at a gas pressure of 45 Torr are described. The millimeter-wavemore » effects on the plasma slab are studied experimentally. The mechanism of microwave-induced variations in the VC brightness and the causes of violation of the local relation between the VC brightness and the intensity of millimeter waves are discussed. Experiments on the imaging of the field patterns of horn antennas and quasi-optical beams demonstrate that this technique can be used for good-quality imaging of millimeter-wave beams in the entire millimeter-wavelength band. The method has a microsecond temporal resolution and a spatial resolution of about 2 mm. Energy sensitivities of about 10 μJ/cm{sup 2} in the Ka-band and about 200 μJ/cm{sup 2} in the D-band have been demonstrated.« less

Partitioning into hazard subregions for regional peaks-over-threshold modeling of heavy precipitation

NASA Astrophysics Data System (ADS)

Carreau, J.; Naveau, P.; Neppel, L.

2017-05-01

The French Mediterranean is subject to intense precipitation events occurring mostly in autumn. These can potentially cause flash floods, the main natural danger in the area. The distribution of these events follows specific spatial patterns, i.e., some sites are more likely to be affected than others. The peaks-over-threshold approach consists in modeling extremes, such as heavy precipitation, by the generalized Pareto (GP) distribution. The shape parameter of the GP controls the probability of extreme events and can be related to the hazard level of a given site. When interpolating across a region, the shape parameter should reproduce the observed spatial patterns of the probability of heavy precipitation. However, the shape parameter estimators have high uncertainty which might hide the underlying spatial variability. As a compromise, we choose to let the shape parameter vary in a moderate fashion. More precisely, we assume that the region of interest can be partitioned into subregions with constant hazard level. We formalize the model as a conditional mixture of GP distributions. We develop a two-step inference strategy based on probability weighted moments and put forward a cross-validation procedure to select the number of subregions. A synthetic data study reveals that the inference strategy is consistent and not very sensitive to the selected number of subregions. An application on daily precipitation data from the French Mediterranean shows that the conditional mixture of GPs outperforms two interpolation approaches (with constant or smoothly varying shape parameter).

Assessment of target detection limits in hyperspectral data

NASA Astrophysics Data System (ADS)

Gross, W.; Boehler, J.; Schilling, H.; Middelmann, W.; Weyermann, J.; Wellig, P.; Oechslin, R.; Kneubuehler, M.

2015-10-01

Hyperspectral remote sensing data can be used for civil and military applications to detect and classify target objects that cannot be reliably separated using broadband sensors. The comparably low spatial resolution is compensated by the fact that small targets, even below image resolution, can still be classified. The goal of this paper is to determine the target size to spatial resolution ratio for successful classification of different target and background materials. Airborne hyperspectral data is used to simulate data with known mixture ratios and to estimate the detection threshold for given false alarm rates. The data was collected in July 2014 over Greding, Germany, using airborne aisaEAGLE and aisaHAWK hyperspectral sensors. On the ground, various target materials were placed on natural background. The targets were four quadratic molton patches with an edge length of 7 meters in the colors black, white, grey and green. Also, two different types of polyethylene (camouflage nets) with an edge length of approximately 5.5 meters were deployed. Synthetic data is generated from the original data using spectral mixtures. Target signatures are linearly combined with different background materials in specific ratios. The simulated mixtures are appended to the original data and the target areas are removed for evaluation. Commonly used classification algorithms, e.g. Matched Filtering, Adaptive Cosine Estimator are used to determine the detection limit. Fixed false alarm rates are employed to find and analyze certain regions where false alarms usually occur first. A combination of 18 targets and 12 backgrounds is analyzed for three VNIR and two SWIR data sets of the same area.

Rheological properties of experimental Bis-GMA/TEGDMA flowable resin composites with various macrofiller/microfiller ratio.

PubMed

Beun, Sébastien; Bailly, Christian; Dabin, Anne; Vreven, José; Devaux, Jacques; Leloup, Gaëtane

2009-02-01

The purpose of this study was to investigate the rheological behavior of resin composites and to evaluate the influence of each component, organic as well as inorganic, on their viscoelastic properties by testing model experimental formulations. Several unfilled mixtures of 2,2-bis-[4-(methacryloxy-2-hydroxy-propoxy)-phenyl]-propane (Bis-GMA) and triethylene glycol dimethacrylate (TEGDMA) were prepared as well as experimental flowable resin composites using a Bis-GMA/TEGDMA 50/50 wt% mixture as organic fraction filled at 60% in weight with varying ratios of silanated barium glass (1 microm) and partially hydrophobic fumed silica (0.1 microm). Their rheological properties were investigated using dynamic oscillatory rheometers. Transmission electron microscopy (TEM) was also performed to investigate the spatial organization of the filler particles. Unfilled Bis-GMA/TEGDMA mixtures all showed a Newtonian behavior. The experimental flowable resin composites were non-Newtonian, shear-thinning fluids. As the quantity of microfiller increased, the viscosity increased and the shear-thinning behavior increased as well. In addition, the experimental composites showed thixotropy, i.e. their viscosity is a function of time after deformation. All these properties were not specifically linked to the creation and destruction of a visible network between inorganic particles, as no difference could be seen between particles' spatial organization at the equilibrium rest state or immediately after deformation. The complex viscoelastic properties of resin composites are due to interactions between microfiller and monomer molecules. Modifying the chemical and physical properties of the particles' surface could possibly improve their flow properties and thus their clinical handling performances.

De novo identification of replication-timing domains in the human genome by deep learning.

PubMed

Liu, Feng; Ren, Chao; Li, Hao; Zhou, Pingkun; Bo, Xiaochen; Shu, Wenjie

2016-03-01

The de novo identification of the initiation and termination zones-regions that replicate earlier or later than their upstream and downstream neighbours, respectively-remains a key challenge in DNA replication. Building on advances in deep learning, we developed a novel hybrid architecture combining a pre-trained, deep neural network and a hidden Markov model (DNN-HMM) for the de novo identification of replication domains using replication timing profiles. Our results demonstrate that DNN-HMM can significantly outperform strong, discriminatively trained Gaussian mixture model-HMM (GMM-HMM) systems and other six reported methods that can be applied to this challenge. We applied our trained DNN-HMM to identify distinct replication domain types, namely the early replication domain (ERD), the down transition zone (DTZ), the late replication domain (LRD) and the up transition zone (UTZ), using newly replicated DNA sequencing (Repli-Seq) data across 15 human cells. A subsequent integrative analysis revealed that these replication domains harbour unique genomic and epigenetic patterns, transcriptional activity and higher-order chromosomal structure. Our findings support the 'replication-domain' model, which states (1) that ERDs and LRDs, connected by UTZs and DTZs, are spatially compartmentalized structural and functional units of higher-order chromosomal structure, (2) that the adjacent DTZ-UTZ pairs form chromatin loops and (3) that intra-interactions within ERDs and LRDs tend to be short-range and long-range, respectively. Our model reveals an important chromatin organizational principle of the human genome and represents a critical step towards understanding the mechanisms regulating replication timing. Our DNN-HMM method and three additional algorithms can be freely accessed at https://github.com/wenjiegroup/DNN-HMM The replication domain regions identified in this study are available in GEO under the accession ID GSE53984. shuwj@bmi.ac.cn or boxc@bmi.ac.cn Supplementary data are available at Bioinformatics online. © The Author 2015. Published by Oxford University Press.

The response of streambed nitrogen cycling to spatial and temporal hyporheic vertical flux patterns and associated residence times

NASA Astrophysics Data System (ADS)

Briggs, M. A.; Lautz, L. K.; Hare, D. K.

2011-12-01

Small beaver dams enhance the development of patchy micro-environments along the stream corridor by trapping sediment and creating complex streambed morphologies. This generates intricate hyporheic flux patterns that govern the exchange of oxygen and redox sensitive solutes between the water column and the streambed, and exert control on the biogeochemical cycling of nitrogen. Specifically, flowpaths from the stream into the subsurface with low residence times create oxic conditions that favor nitrification, while flowpaths with longer residence times become anoxic and favor denitrification. To investigate these processes we collected vertical profiles of pore water upstream of two beaver dams in Wyoming, USA at nine locations with varied morphology. We sampled pore water to the 0.55 m depth every week for five weeks as stream discharge dropped by 45% and subsequently measured concentrations of dissolved oxygen and several redox sensitive solutes, including nitrate. Additionally, estimates of hyporheic flux along these nine vertical profiles through time were made using high-resolution heat data combined with 1-D heat transport modeling. The data show that areas of rapid, deep hyporheic flux at the glides immediately upstream of the dams were oxygen rich, and were generally sites of moderate net nitrification to at least the 0.35 m depth. These conditions were relatively steady over the study period. Hyporheic zones at sediment bars closest to the dams were hotspots of nitrate production to a depth of 0.35 m, with nitrate concentrations increasing by as much as 400% as vertical flux fell sharply and residence times increased over the study period. In contrast, shallow bars farther upstream from the dams showed increasing fluxes and decreased residence times, which caused a shift from net denitrification to net nitrification over the period at shallow depths. These results support previous work indicating threshold behavior of nitrogen cycling in response to flowpath residence time. Furthermore the threshold between oxic and anoxic conditions, and subsequently the zone of peak net nitrification, can be approached from either end of the redox spectrum simultaneously within the same system in response to complex temporal changes in vertical flux. Finally, pools were sites of weak hyporheic flux, overall anoxic conditions and net denitrification. These patterns offer more evidence of the complicated spatial and temporal patterns of nitrogen cycling in the hyporheic zone, but also show that flux patterns measured with 1-D heat transport models may be used to develop predictive relationships regarding streambed biogeochemical conditions and hot spots of nitrogen cycling.

Pattern analysis of community health center location in Surabaya using spatial Poisson point process

NASA Astrophysics Data System (ADS)

Kusumaningrum, Choriah Margareta; Iriawan, Nur; Winahju, Wiwiek Setya

2017-11-01

Community health center (puskesmas) is one of the closest health service facilities for the community, which provide healthcare for population on sub-district level as one of the government-mandated community health clinics located across Indonesia. The increasing number of this puskesmas does not directly comply the fulfillment of basic health services needed in such region. Ideally, a puskesmas has to cover up to maximum 30,000 people. The number of puskesmas in Surabaya indicates an unbalance spread in all of the area. This research aims to analyze the spread of puskesmas in Surabaya using spatial Poisson point process model in order to get the effective location of Surabaya's puskesmas which based on their location. The results of the analysis showed that the distribution pattern of puskesmas in Surabaya is non-homogeneous Poisson process and is approched by mixture Poisson model. Based on the estimated model obtained by using Bayesian mixture model couple with MCMC process, some characteristics of each puskesmas have no significant influence as factors to decide the addition of health center in such location. Some factors related to the areas of sub-districts have to be considered as covariate to make a decision adding the puskesmas in Surabaya.

Engineering frequency-dependent superfluidity in Bose-Fermi mixtures

NASA Astrophysics Data System (ADS)

Arzamasovs, Maksims; Liu, Bo

2018-04-01

Unconventional superconductivity and superfluidity are among the most exciting and fascinating quantum phenomena in condensed-matter physics. Usually such states are characterized by nontrivial spin or spatial symmetry of the pairing order parameter, such as "spin triplet" or "p wave." However, besides spin and spatial dependence the order parameter may have unconventional frequency dependence which is also permitted by Fermi-Dirac statistics. Odd-frequency fermionic pairing is an exciting paradigm when discussing exotic superfluidity or superconductivity and is yet to be realized in experiments. In this paper we propose a symmetry-based method of controlling frequency dependence of the pairing order parameter via manipulating the inversion symmetry of the system. First, a toy model is introduced to illustrate that frequency dependence of the order parameter can be achieved through our proposed approach. Second, by taking advantage of recent rapid developments in producing spin-orbit-coupled dispersions in ultracold gases, we propose a Bose-Fermi mixture to realize such frequency-dependent superfluid. The key idea is introducing the frequency-dependent attraction between fermions mediated by Bogoliubov phonons with asymmetric dispersion. Our proposal should pave an alternative way for exploring frequency-dependent superfluids with cold atoms.

Fast algorithm for spectral mixture analysis of imaging spectrometer data

NASA Astrophysics Data System (ADS)

Schouten, Theo E.; Klein Gebbinck, Maurice S.; Liu, Z. K.; Chen, Shaowei

1996-12-01

Imaging spectrometers acquire images in many narrow spectral bands but have limited spatial resolution. Spectral mixture analysis (SMA) is used to determine the fractions of the ground cover categories (the end-members) present in each pixel. In this paper a new iterative SMA method is presented and tested using a 30 band MAIS image. The time needed for each iteration is independent of the number of bands, thus the method can be used for spectrometers with a large number of bands. Further a new method, based on K-means clustering, for obtaining endmembers from image data is described and compared with existing methods. Using the developed methods the available MAIS image was analyzed using 2 to 6 endmembers.

On the Convection of a Binary Mixture in a Horizontal Layer Under High-frequency Vibrations

NASA Astrophysics Data System (ADS)

Smorodin, B. L.; Ishutov, S. M.; Myznikova, B. I.

2018-02-01

The convective instability and non-linear flows are considered in a horizontal, binary-mixture layer with negative Soret coupling, subjected to the high-frequency vibration whose axis is directed at an arbitrary angle to the layer boundaries. The limiting case of long-wave disturbances is studied using the perturbation method. The influence of the intensity and direction of vibration on the spatially-periodic traveling wave solution is analyzed. It is shown that the shift in the Rayleigh number range, in which the traveling wave regime exists, toward higher values is a response to a horizontal-to-vertical transition in the vibration axis orientation. The characteristics of amplitude- and phase-modulated traveling waves are obtained and discussed.

Models of chromatin spatial organisation in the cell nucleus

NASA Astrophysics Data System (ADS)

Nicodemi, Mario

2014-03-01

In the cell nucleus chromosomes have a complex architecture serving vital functional purposes. Recent experiments have started unveiling the interaction map of DNA sites genome-wide, revealing different levels of organisation at different scales. The principles, though, which orchestrate such a complex 3D structure remain still mysterious. I will overview the scenario emerging from some classical polymer physics models of the general aspect of chromatin spatial organisation. The available experimental data, which can be rationalised in a single framework, support a picture where chromatin is a complex mixture of differently folded regions, self-organised across spatial scales according to basic physical mechanisms. I will also discuss applications to specific DNA loci, e.g. the HoxB locus, where models informed with biological details, and tested against targeted experiments, can help identifying the determinants of folding.

Detection of smoothly distributed spatial outliers, with applications to identifying the distribution of parenchymal hyperinflation following an airway challenge in asthmatics.

PubMed

Thurman, Andrew L; Choi, Jiwoong; Choi, Sanghun; Lin, Ching-Long; Hoffman, Eric A; Lee, Chang Hyun; Chan, Kung-Sik

2017-05-10

Methacholine challenge tests are used to measure changes in pulmonary function that indicate symptoms of asthma. In addition to pulmonary function tests, which measure global changes in pulmonary function, computed tomography images taken at full inspiration before and after administration of methacholine provide local air volume changes (hyper-inflation post methacholine) at individual acinar units, indicating local airway hyperresponsiveness. Some of the acini may have extreme air volume changes relative to the global average, indicating hyperresponsiveness, and those extreme values may occur in clusters. We propose a Gaussian mixture model with a spatial smoothness penalty to improve prediction of hyperresponsive locations that occur in spatial clusters. A simulation study provides evidence that the spatial smoothness penalty improves prediction under different data-generating mechanisms. We apply this method to computed tomography data from Seoul National University Hospital on five healthy and ten asthmatic subjects. Copyright © 2017 John Wiley & Sons, Ltd. Copyright © 2017 John Wiley & Sons, Ltd.

Laser-diagnostic mapping of temperature and soot statistics in a 2-m diameter turbulent pool fire

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kearney, Sean P.; Grasser, Thomas W.

We present spatial profiles of temperature and soot-volume-fraction statistics from a sooting 2-m base diameter turbulent pool fire, burning a 10%-toluene / 90%-methanol fuel mixture. Dual-pump coherent anti-Stokes Raman scattering and laser-induced incandescence are utilized to obtain radial profiles of temperature and soot probability density functions (pdf) as well as estimates of temperature/soot joint statistics at three vertical heights above the surface of the methanol/toluene fuel pool. Results are presented both in the fuel vapor-dome region at ¼ base diameter and in the actively burning region at ½ and ¾ diameters above the fuel surface. The spatial evolution of themore » soot and temperature pdfs is discussed and profiles of the temperature and soot mean and rms statistics are provided. Joint temperature/soot statistics are presented as spatially resolved conditional averages across the fire plume, and in terms of a joint pdf obtained by including measurements from multiple spatial locations.« less

Laser-diagnostic mapping of temperature and soot statistics in a 2-m diameter turbulent pool fire

DOE PAGES

Kearney, Sean P.; Grasser, Thomas W.

2017-08-10

We present spatial profiles of temperature and soot-volume-fraction statistics from a sooting 2-m base diameter turbulent pool fire, burning a 10%-toluene / 90%-methanol fuel mixture. Dual-pump coherent anti-Stokes Raman scattering and laser-induced incandescence are utilized to obtain radial profiles of temperature and soot probability density functions (pdf) as well as estimates of temperature/soot joint statistics at three vertical heights above the surface of the methanol/toluene fuel pool. Results are presented both in the fuel vapor-dome region at ¼ base diameter and in the actively burning region at ½ and ¾ diameters above the fuel surface. The spatial evolution of themore » soot and temperature pdfs is discussed and profiles of the temperature and soot mean and rms statistics are provided. Joint temperature/soot statistics are presented as spatially resolved conditional averages across the fire plume, and in terms of a joint pdf obtained by including measurements from multiple spatial locations.« less

High spatial resolution measurements of ram accelerator gas dynamic phenomena

NASA Technical Reports Server (NTRS)

Hinkey, J. B.; Burnham, E. A.; Bruckner, A. P.

1992-01-01

High spatial resolution experimental tube wall pressure measurements of ram accelerator gas dynamic phenomena are presented. The projectile resembles the centerbody of a ramjet and travels supersonically through a tube filled with a combustible gaseous mixture, with the tube acting as the outer cowling. Pressure data are recorded as the projectile passes by sensors mounted in the tube wall at various locations along the tube. Data obtained by using a special highly instrumented section of tube has allowed the recording of gas dynamic phenomena with a spatial resolution on the order of one tenth the projectile length. High spatial resolution tube wall pressure data from the three regimes of propulsion studied to date (subdetonative, transdetonative, and superdetonative) are presented and reveal the 3D character of the flowfield induced by projectile fins and the canting of the projectile body relative to the tube wall. Also presented for comparison to the experimental data are calculations made with an inviscid, 3D CFD code.

Health risks from large-scale water pollution: trends in Central Asia.

PubMed

Törnqvist, Rebecka; Jarsjö, Jerker; Karimov, Bakhtiyor

2011-02-01

Limited data on the pollution status of spatially extensive water systems constrain health-risk assessments at basin-scales. Using a recipient measurement approach in a terminal water body, we show that agricultural and industrial pollutants in groundwater-surface water systems of the Aral Sea Drainage Basin (covering the main part of Central Asia) yield cumulative health hazards above guideline values in downstream surface waters, due to high concentrations of copper, arsenic, nitrite, and to certain extent dichlorodiphenyltrichloroethane (DDT). Considering these high-impact contaminants, we furthermore perform trend analyses of their upstream spatial-temporal distribution, investigating dominant large-scale spreading mechanisms. The ratio between parent DDT and its degradation products showed that discharges into or depositions onto surface waters are likely to be recent or ongoing. In river water, copper concentrations peak during the spring season, after thawing and snow melt. High spatial variability of arsenic concentrations in river water could reflect its local presence in the top soil of nearby agricultural fields. Overall, groundwaters were associated with much higher health risks than surface waters. Health risks can therefore increase considerably, if the downstream population must switch to groundwater-based drinking water supplies during surface water shortage. Arid regions are generally vulnerable to this problem due to ongoing irrigation expansion and climate changes. Copyright © 2010 Elsevier Ltd. All rights reserved.

Using long-term data to predict fish abundance: the case of Prochilodus lineatus (Characiformes, Prochilodontidae) in the intensely regulated upper Paraná River

USGS Publications Warehouse

Piana, Pitágoras A.; Cardoso, Bárbara F.; Dias, Joilson; Gomes, Luiz C.; Agostinho, Angelo A.; Miranda, Leandro E.

2017-01-01

Populations show spatial-temporal fluctuations in abundance, partly due to random processes and partly due to self-regulatory processes. We evaluated the effects of various external factors on the population numerical abundance of curimba Prochilodus lineatus in the upper Paraná River floodplain, Brazil, over a 19-year period. Panel data analysis was applied to examine the structure of temporal and spatial abundance while controlling auto-regressive processes and spatial non-homogeneity variances that often obscure relationships. As sources of population variation, we considered predation, competition, selected abiotic variables, construction of a dam upstream of the study area, water level and flood intensity during the spawning period. We found that biological interactions (predation and competition) were not significantly related to variations in curimba abundance; specific conductance was a space indicator of abundance, apparently linked to the biology of the species; intensity of floods determined inter-annual variation in abundances; Porto Primavera Dam negatively impacted the abundances at sites in the floodplain directly affected by discharges from the dam. Panel data analysis was a powerful tool that identified the need for intense flooding to maintain high abundances of curimba in the upper Paraná River. We believe our results apply to other species with similar life strategy.

INDIVIDUAL BASED MODELLING APPROACH TO THERMAL ...

EPA Pesticide Factsheets

Diadromous fish populations in the Pacific Northwest face challenges along their migratory routes from declining habitat quality, harvest, and barriers to longitudinal connectivity. Changes in river temperature regimes are producing an additional challenge for upstream migrating adult salmon and steelhead, species that are sensitive to absolute and cumulative thermal exposure. Adult salmon populations have been shown to utilize cold water patches along migration routes when mainstem river temperatures exceed thermal optimums. We are employing an individual based model (IBM) to explore the costs and benefits of spatially-distributed cold water refugia for adult migrating salmon. Our model, developed in the HexSim platform, is built around a mechanistic behavioral decision tree that drives individual interactions with their spatially explicit simulated environment. Population-scale responses to dynamic thermal regimes, coupled with other stressors such as disease and harvest, become emergent properties of the spatial IBM. Other model outputs include arrival times, species-specific survival rates, body energetic content, and reproductive fitness levels. Here, we discuss the challenges associated with parameterizing an individual based model of salmon and steelhead in a section of the Columbia River. Many rivers and streams in the Pacific Northwest are currently listed as impaired under the Clean Water Act as a result of high summer water temperatures. Adverse effec

Planetary boundary layer height retrieval at UMBC in the frame of NOAA/ARL campaign

NASA Astrophysics Data System (ADS)

Lolli, S.; Delgado, R.; Compton, J.; Hoff, R.

2011-11-01

The determination of the depth of daytime and nighttime Planetary Boundary Layer Height (PBLH) must be known very accurately to relate boundary layer concentrations of gases or particles to upstream fluxes. Moreover, the air quality forecasts rely upon semi-empirical parameterizations within numerical models for the description of dispersion, formation and fate of pollutants influenced by the spatial and temporal distribution of emissions in cities, topography, and weather. The particulate matter (PM) mass measured at the ground level is a common way to quantify the amount of aerosol particles in the atmosphere and is the standard used to evaluate air quality. Remote sensing of atmospheric aerosols in the lower troposphere that affect air quality is done at the University of Maryland, Baltimore County (UMBC) by the Atmospheric Lidar Group, that supported the joint NOAA/ARL and NCEP ad hoc field study. These campaigns launched radiosondes from Howard University (HU) (26.6km south of UMBC) and RFK Stadium (29.15 km south of UMBC) during September 14-22, 2009 to develop a database to investigate the evolution and spatial variability of the PBLH. In this paper, we examined the potential for continual observation of PBLH by performing a statistical comparison of the spatial and temporal resolution of PBLH from lidars, wind profiler, and radiosonde measurements

Dynamics of prey moving through a predator field: a model of migrating juvenile salmon

USGS Publications Warehouse

Petersen, J.H.; DeAngelis, D.L.

2000-01-01

The migration of a patch of prey through a field of relatively stationary predators is a situation that occurs frequently in nature. Making quantitative predictions concerning such phenomena may be difficult, however, because factors such as the number of the prey in the patch, the spatial length and velocity of the patch, and the feeding rate and satiation of the predators all interact in a complex way. However, such problems are of great practical importance in many management situations; e.g., calculating the mortality of juvenile salmon (smolts) swimming down a river or reservoir containing many predators. Salmon smolts often move downstream in patches short compared with the length of the reservoir. To take into account the spatial dependence of the interaction, we used a spatially-explicit, individual-based modeling approach. We found that the mortality of prey depends strongly on the number of prey in the patch, the downstream velocity of prey in the patch, and the dispersion or spread of the patch in size through time. Some counterintuitive phenomena are predicted, such as predators downstrean capturing more prey per predator than those upstream, even though the number of prey may be greatly depleted by the time the prey patch reaches the downstream predators. Individual-based models may be necessary for complex spatial situations, such as salmonid migration, where processes such as schooling occur at fine scales and affect system predictions. We compare some results to predictions from other salmonid models. (C) 2000 Elsevier Science Inc.

Basin-scale impacts of hydropower development on the Mompós Depression wetlands, Colombia

NASA Astrophysics Data System (ADS)

Angarita, Héctor; Wickel, Albertus J.; Sieber, Jack; Chavarro, John; Maldonado-Ocampo, Javier A.; Herrera-R., Guido A.; Delgado, Juliana; Purkey, David

2018-05-01

A number of large hydropower dams are currently under development or in an advanced stage of planning in the Magdalena River basin, Colombia, spelling uncertainty for the Mompós Depression wetlands, one of the largest wetland systems in South America at 3400 km2. Annual large-scale inundation of floodplains and their associated wetlands regulates water, nutrient, and sediment cycles, which in turn sustain a wealth of ecological processes and ecosystem services, including critical food supplies. In this study, we implemented an integrated approach focused on key attributes of ecologically functional floodplains: (1) hydrologic connectivity between the river and the floodplain, and between upstream and downstream sections; (2) hydrologic variability patterns and their links to local and regional processes; and (3) the spatial scale required to sustain floodplain-associated processes and benefits, like migratory fish biodiversity. The implemented framework provides an explicit quantification of the nonlinear or direct response relationship of those considerations with hydropower development. The proposed framework was used to develop a comparative analysis of the potential effects of the hydropower expansion necessary to meet projected 2050 electricity requirements. As part of this study, we developed an enhancement of the Water Evaluation and Planning system (WEAP) that allows resolution of the floodplains water balance at a medium scale (˜ 1000 to 10 000 km2) and evaluation of the potential impacts of upstream water management practices. In the case of the Mompós Depression wetlands, our results indicate that the potential additional impacts of new hydropower infrastructure with respect to baseline conditions can range up to one order of magnitude between scenarios that are comparable in terms of energy capacity. Fragmentation of connectivity corridors between lowland floodplains and upstream spawning habitats and reduction of sediment loads show the greatest impacts, with potential reductions of up to 97.6 and 80 %, respectively, from pre-dam conditions. In some development scenarios, the amount of water regulated and withheld by upstream infrastructure is of similar magnitude to existing fluxes involved in the episodic inundation of the floodplain during dry years and, thus, can also induce substantial changes in floodplain seasonal dynamics of average-to-dry years in some areas of the Mompós Depression.

Change in the Structure of Escherichia coli Population and the Pattern of Virulence Genes along a Rural Aquatic Continuum

PubMed Central

Petit, Fabienne; Clermont, Olivier; Delannoy, Sabine; Servais, Pierre; Gourmelon, Michèle; Fach, Patrick; Oberlé, Kenny; Fournier, Matthieu; Denamur, Erick; Berthe, Thierry

2017-01-01

The aim of this study was to investigate the diversity of the Escherichia coli population, focusing on the occurrence of pathogenic E. coli, in surface water draining a rural catchment. Two sampling campaigns were carried out in similar hydrological conditions (wet period, low flow) along a river continuum, characterized by two opposite density gradients of animals (cattle and wild animals) and human populations. While the abundance of E. coli slightly increased along the river continuum, the abundance of both human and ruminant-associated Bacteroidales markers, as well as the number of E. coli multi-resistant to antibiotics, evidenced a fecal contamination originating from animals at upstream rural sites, and from humans at downstream urban sites. A strong spatial modification of the structure of the E. coli population was observed. At the upstream site close to a forest, a higher abundance of the B2 phylogroup and Escherichia clade strains were observed. At the pasture upstream site, a greater proportion of both E and B1 phylogroups was detected, therefore suggesting a fecal contamination of mainly bovine origin. Conversely, in downstream urban sites, A, D, and F phylogroups were more abundant. To assess the occurrence of intestinal pathogenic strains, virulence factors [afaD, stx1, stx2, eltB (LT), estA (ST), ipaH, bfpA, eae, aaiC and aatA] were screened among 651 E. coli isolates. Intestinal pathogenic strains STEC O174:H21 (stx2) and EHEC O26:H11 (eae, stx1) were isolated in water and sediments close to the pasture site. In contrast, in the downstream urban site aEPEC/EAEC and DAEC of human origin, as well as extra-intestinal pathogenic E. coli belonging to clonal group A of D phylogroup, were sampled. Even if the estimated input of STEC (Shiga toxin-producing E. coli) – released in water at the upstream pasture site – at the downstream site was low, we show that STEC could persist in sediment. These results show that, the run-off of small cattle farms contributed, as much as the wastewater effluent, in the dissemination of pathogenic E. coli in both water and sediments, even if the microbiological quality of the water was good or to average quality according to the French water index. PMID:28458656

Diverse Early Life-History Strategies in Migratory Amazonian Catfish: Implications for Conservation and Management.

PubMed

Hegg, Jens C; Giarrizzo, Tommaso; Kennedy, Brian P

2015-01-01

Animal migrations provide important ecological functions and can allow for increased biodiversity through habitat and niche diversification. However, aquatic migrations in general, and those of the world's largest fish in particular, are imperiled worldwide and are often poorly understood. Several species of large Amazonian catfish carry out some of the longest freshwater fish migrations in the world, travelling from the Amazon River estuary to the Andes foothills. These species are important apex predators in the main stem rivers of the Amazon Basin and make up the region's largest fishery. They are also the only species to utilize the entire Amazon Basin to complete their life cycle. Studies indicate both that the fisheries may be declining due to overfishing, and that the proposed and completed dams in their upstream range threaten spawning migrations. Despite this, surprisingly little is known about the details of these species' migrations, or their life history. Otolith microchemistry has been an effective method for quantifying and reconstructing fish migrations worldwide across multiple spatial scales and may provide a powerful tool to understand the movements of Amazonian migratory catfish. Our objective was to describe the migratory behaviors of the three most populous and commercially important migratory catfish species, Dourada (Brachyplatystoma rousseauxii), Piramutaba (Brachyplatystoma vaillantii), and Piraíba (Brachyplatystoma filamentosum). We collected fish from the mouth of the Amazon River and the Central Amazon and used strontium isotope signatures ((87)Sr/(86)Sr) recorded in their otoliths to determine the location of early rearing and subsequent. Fish location was determined through discriminant function classification, using water chemistry data from the literature as a training set. Where water chemistry data was unavailable, we successfully in predicted (87)Sr/(86)Sr isotope values using a regression-based approach that related the geology of the upstream watershed to the Sr isotope ratio. Our results provide the first reported otolith microchemical reconstruction of Brachyplatystoma migratory movements in the Amazon Basin. Our results indicate that juveniles exhibit diverse rearing strategies, rearing in both upstream and estuary environments. This contrasts with the prevailing understanding that juveniles rear in the estuary before migrating upstream; however, it is supported by some fisheries data that has indicated the presence of alternate spawning and rearing life-histories. The presence of alternate juvenile rearing strategies may have important implications for conservation and management of the fisheries in the region.

On using TRMM data and rainfall forecasts from meteorological models in data-scarce transboundary catchments - an example of Bangladesh

NASA Astrophysics Data System (ADS)

Bhattacharya, Biswa; Tohidul Islam, Md.

2014-05-01

This research focuses on the flood risk of the Haor region in the north-eastern part of Bangladesh. The prediction of the hydrological variables at different spatial and temporal scales in the Haor region is dependent on the influence of several upstream rivers in the Meghalaya catchment in India. Limitation in hydro-meteorological data collection and data sharing issues between the two countries dominate the feasibility of hydrological studies, particularly for near-realtime predictions. One of the possible solutions seems to be in making use of the variety of satellite based and meteorological model products for rainfall. The abundance of a variety of rainfall products provides a good basis of hydrological modelling of a part of the Ganges and Brahmaputra basin. In this research the TRMM data and rainfall forecasts from ECMWF have been compared with the scarce rain gauge data from the upstream Meghalaya catchment. Subsequently, the TRMM data and rainfall forecasts from ECMWF have been used as the meteorological input to a rainfall-runoff model of the Meghalaya catchment. The rainfall-runoff model of Meghalaya has been developed using the DEM data from SRTM. The generated runoff at the outlet of Meghalaya has been used as the upstream boundary condition in the existing rainfall-runoff model of the Haor region. The simulation results have been compared with the existing results based on simulations without any information of the rainfall-runoff in the upstream Meghalaya catchment. The comparison showed that the forecasting lead time has been substantially increased. As per the existing results the forecasting lead time at a number of locations in the catchment was about 6 to 8 hours. With the new results the forecasting lead time has gone up, with different levels of accuracy, to about 24 hours. This additional lead time will be highly beneficial in managing flood risk of the Haor region of Bangladesh. The research shows that satellite based rainfall products and rainfall forecasts from meteorological models can be very useful in flood risk management, particularly for data scarce regions and/or transboundary regions with data sharing issues. Keywords: flood risk management, TRMM, ECMWF, flood forecasting, Haor, Bangladesh. Abbreviations: TRMM: Tropical Rainfall Measuring Mission ECMWF: European Centre for Medium-Range Weather Forecasts DEM: Digital Elevation Model SRTM: Shuttle Radar Topography Mission

Application of a multistate model to estimate culvert effects on movement of small fishes

USGS Publications Warehouse

Norman, J.R.; Hagler, M.M.; Freeman, Mary C.; Freeman, B.J.

2009-01-01

While it is widely acknowledged that culverted road-stream crossings may impede fish passage, effects of culverts on movement of nongame and small-bodied fishes have not been extensively studied and studies generally have not accounted for spatial variation in capture probabilities. We estimated probabilities for upstream and downstream movement of small (30-120 mm standard length) benthic and water column fishes across stream reaches with and without culverts at four road-stream crossings over a 4-6-week period. Movement and reach-specific capture probabilities were estimated using multistate capture-recapture models. Although none of the culverts were complete barriers to passage, only a bottomless-box culvert appeared to permit unrestricted upstream and downstream movements by benthic fishes based on model estimates of movement probabilities. At two box culverts that were perched above the water surface at base flow, observed movements were limited to water column fishes and to intervals when runoff from storm events raised water levels above the perched level. Only a single fish was observed to move through a partially embedded pipe culvert. Estimates for probabilities of movement over distances equal to at least the length of one culvert were low (e.g., generally ???0.03, estimated for 1-2-week intervals) and had wide 95% confidence intervals as a consequence of few observed movements to nonadjacent reaches. Estimates of capture probabilities varied among reaches by a factor of 2 to over 10, illustrating the importance of accounting for spatially variable capture rates when estimating movement probabilities with capture-recapture data. Longer-term studies are needed to evaluate temporal variability in stream fish passage at culverts (e.g., in relation to streamflow variability) and to thereby better quantify the degree of population fragmentation caused by road-stream crossings with culverts. ?? American Fisheries Society 2009.

Variation in flow and suspended sediment transport in a montane river affected by hydropeaking and instream mining

NASA Astrophysics Data System (ADS)

Béjar, M.; Vericat, D.; Batalla, R. J.; Gibbins, C. N.

2018-06-01

The temporal and spatial variability of water and sediment loads of rivers is controlled by a suite of factors whose individual effects are often difficult to disentangle. While land use changes and localised human activities such as instream mining and hydropeaking alter water and sediment transfer, tributaries naturally contribute to discharge and sediment load of mainstem rivers, and so may help compensate upstream anthropogenic factors. The work presented here aimed to assess water and the sediment transfer in a river reach affected by gravel extraction and hydropeaking, set against a backdrop of changes to the supply of water and sediment from tributaries. Discharge and suspended sediment transport were monitored during two average hydrological years at three cross-sections along a 10-km reach of the upper River Cinca, in the Southern Pyrenees. Water and sediment loads differed substantially between the reaches. The upper reach showed a largely torrential discharge regime, controlled mainly by floods, and had high but variable water and sediment loads. The middle reach was influenced markedly by hydropeaking and tributary inflows, which increased its annual water yield four-fold. Suspended sediment load in this reach increased by only 25% compared to upstream, indicating that dilution predominated. In the lowermost section, while discharge remained largely unaltered, sediment load increased appreciably as a result of changes to sediment availability from instream mining and inputs from tributaries. At the reach scale, snowmelt and summer and autumn thunderstorms were responsible for most of the water yield, while flood flows determined the magnitude and transport of the sediment load. The study highlights that a combination of natural and human factors control the spatial and temporal transfer of water and sediment in river channels and that, depending on their geographic location and effect-size, can result in marked variability even over short downstream distances.

Hybrid Upwinding for Two-Phase Flow in Heterogeneous Porous Media with Buoyancy and Capillarity

NASA Astrophysics Data System (ADS)

Hamon, F. P.; Mallison, B.; Tchelepi, H.

2016-12-01

In subsurface flow simulation, efficient discretization schemes for the partial differential equations governing multiphase flow and transport are critical. For highly heterogeneous porous media, the temporal discretization of choice is often the unconditionally stable fully implicit (backward-Euler) method. In this scheme, the simultaneous update of all the degrees of freedom requires solving large algebraic nonlinear systems at each time step using Newton's method. This is computationally expensive, especially in the presence of strong capillary effects driven by abrupt changes in porosity and permeability between different rock types. Therefore, discretization schemes that reduce the simulation cost by improving the nonlinear convergence rate are highly desirable. To speed up nonlinear convergence, we present an efficient fully implicit finite-volume scheme for immiscible two-phase flow in the presence of strong capillary forces. In this scheme, the discrete viscous, buoyancy, and capillary spatial terms are evaluated separately based on physical considerations. We build on previous work on Implicit Hybrid Upwinding (IHU) by using the upstream saturations with respect to the total velocity to compute the relative permeabilities in the viscous term, and by determining the directionality of the buoyancy term based on the phase density differences. The capillary numerical flux is decomposed into a rock- and geometry-dependent transmissibility factor, a nonlinear capillary diffusion coefficient, and an approximation of the saturation gradient. Combining the viscous, buoyancy, and capillary terms, we obtain a numerical flux that is consistent, bounded, differentiable, and monotone for homogeneous one-dimensional flow. The proposed scheme also accounts for spatially discontinuous capillary pressure functions. Specifically, at the interface between two rock types, the numerical scheme accurately honors the entry pressure condition by solving a local nonlinear problem to compute the numerical flux. Heterogeneous numerical tests demonstrate that this extended IHU scheme is non-oscillatory and convergent upon refinement. They also illustrate the superior accuracy and nonlinear convergence rate of the IHU scheme compared with the standard phase-based upstream weighting approach.

Multi-scalar interactions between infrastructure, smallholder water management, and coastal dynamics in the Bengal Delta, Bangladesh

NASA Astrophysics Data System (ADS)

Rogers, K. G.; Brondizio, E.; Roy, K.; Syvitski, J. P.

2016-12-01

Because of their low-lying elevations and large number of inhabitants and infrastructure, river deltas are ground zero for climate change impacts, particularly from sea-level rise and storm surges. The increased vulnerability of downstream delta communities to coastal flooding as a result of upstream engineering has been acknowledged for decades. What has received less attention is the sensitivity of deltas to the interactions of these processes and increasing intensity of cultivation and irrigation in their coastal regions. Beyond basin-scale damming, regional infrastructure affects the movement of sediment and water on deltas, and combined with upstream modifications may exacerbate the risk of expanded tidal flooding, erosion of arable land, and salinization of soils and groundwater associated with sea level rise. To examine the social-biophysical feedbacks associated with regional-scale infrastructure, smallholder water management practices and coastal dynamics, a nested framework was applied to two districts of the coastal southwest region of Bangladesh. The two districts vary in tidal range, salinity, freshwater availability and socioeconomic structures, and are spatially varied in farmer's adaptations. Both districts contain numerous large embankment systems initially designed to protect cropland from tidal flooding, but that have been poorly maintained since their construction in the 1960's. The framework was co-produced using local-level stakeholder input collected during group interviews with rural farmers in 8 villages within the two districts, and explicitly accounts for engineered and natural biophysical variables as well as governance and institutional structures at 3 levels of analysis. Household survey results indicate that the presence or absence of embankments as a result of poor management and dynamic coastal processes is the primary control on freshwater availability and thus influences farming strategies, socioeconomic conditions and social positions in both districts. Local-scale interactions with the embankments are spatially heterogeneous, but geospatial analyses show the potential for these to collectively impact physical and social stability across a region already vulnerable to coastal flooding.

Three-dimensional flow structure and patterns of bed shear stress in an evolving compound meander bend

USGS Publications Warehouse

Engel, Frank; Rhoads, Bruce L.

2016-01-01

Compound meander bends with multiple lobes of maximum curvature are common in actively evolving lowland rivers. Interaction among spatial patterns of mean flow, turbulence, bed morphology, bank failures and channel migration in compound bends is poorly understood. In this paper, acoustic Doppler current profiler (ADCP) measurements of the three-dimensional (3D) flow velocities in a compound bend are examined to evaluate the influence of channel curvature and hydrologic variability on the structure of flow within the bend. Flow structure at various flow stages is related to changes in bed morphology over the study timeframe. Increases in local curvature within the upstream lobe of the bend reduce outer bank velocities at morphologically significant flows, creating a region that protects the bank from high momentum flow and high bed shear stresses. The dimensionless radius of curvature in the upstream lobe is one-third less than that of the downstream lobe, with average bank erosion rates less than half of the erosion rates for the downstream lobe. Higher bank erosion rates within the downstream lobe correspond to the shift in a core of high velocity and bed shear stresses toward the outer bank as flow moves through the two lobes. These erosion patterns provide a mechanism for continued migration of the downstream lobe in the near future. Bed material size distributions within the bend correspond to spatial patterns of bed shear stress magnitudes, indicating that bed material sorting within the bend is governed by bed shear stress. Results suggest that patterns of flow, sediment entrainment, and planform evolution in compound meander bends are more complex than in simple meander bends. Moreover, interactions among local influences on the flow, such as woody debris, local topographic steering, and locally high curvature, tend to cause compound bends to evolve toward increasing planform complexity over time rather than stable configurations.

Reach-scale channel sensitivity to multiple human activities and natural events: Lower Santa Clara River, California, USA

NASA Astrophysics Data System (ADS)

Downs, Peter W.; Dusterhoff, Scott R.; Sears, William A.

2013-05-01

Understanding the cumulative impact of natural and human influences on the sensitivity of channel morphodynamics, a relative measure between the drivers for change and the magnitude of channel response, requires an approach that accommodates spatial and temporal variability in the suite of primary stressors. Multiple historical data sources were assembled to provide a reach-scale analysis of the lower Santa Clara River (LSCR) in Ventura County, California, USA. Sediment supply is naturally high due to tectonic activity, earthquake-generated landslides, wildfires, and high magnitude flow events during El Niño years. Somewhat typically for the region, the catchment has been subject to four reasonably distinct land use and resource management combinations since European-American settlement. When combined with analysis of channel morphological response (quantifiable since ca. 1930), reach-scale and temporal differences in channel sensitivity become apparent. Downstream reaches have incised on average 2.4 m and become narrower by almost 50% with changes focused in a period of highly sensitive response after about 1950 followed by forced insensitivity caused by structural flood embankments and a significant grade control structure. In contrast, the middle reaches have been responsive but are morphologically resilient, and the upstream reaches show a mildly sensitive aggradational trend. Superimposing the natural and human drivers for change reveals that large scale stressors (related to ranching and irrigation) have been replaced over time by a suite of stressors operating at multiple spatial scales. Lower reaches have been sensitive primarily to 'local' scale impacts (urban growth, flood control, and aggregate mining) whereas, upstream, catchment-scale influences still prevail (including flow regulation and climate-driven sediment supply factors). These factors illustrate the complexity inherent to cumulative impact assessment in fluvial systems, provide evidence for a distinct Anthropocene fluvial response, and underpin the enormity of the challenge faced in trying to sustainably manage and restore rivers.

Effects Of Leaky Sewers On Groundwater Quality

NASA Astrophysics Data System (ADS)

Leschik, S.; Musolff, A.; Reinstorf, F.; Strauch, G.; Oswald, S. E.; Schirmer, M.

2007-12-01

The impact of urban areas on groundwater quality has become an emerging research field in hydrogeology. Urban subsurface infrastructures like sewer networks are often leaky, so untreated wastewater may enter the urban aquifer. The transport of wastewater into the groundwater is still not well understood under field conditions. In the research platform WASSER Leipzig (Water And Sewershed Study of Environmental Risk in Leipzig- Germany) the effects of leaky sewers on the groundwater quality are investigated. The research is focused on the occurrence and transport of so-called "xenobiotics" such as pharmaceuticals and personal care product additives. Xenobiotics may pose a threat on human health, but can also be considered a marker for an urban impact on water resources. A new test site was established in Leipzig to quantify mass fluxes of xenobiotics into the groundwater from a leaky sewer. Corresponding to the leaks which were detected by closed circuit television inspections, monitoring wells were installed up- and downstream of the sewer. Concentrations of eight xenobiotics (technical-nonylphenol, bisphenol-a, caffeine, galaxolide, tonalide, carbamazepine, phenazone, ethinylestradiol) obtained from first sampling programmes were found to be highly heterogeneous, but a relation between the position of the sampling points and the sewer could not be clearly identified. However, concentrations of sodium, chloride, potassium and nitrate increased significantly downstream of the sewer which may be due to wastewater exfiltration, since no other source is known on the water flowpath from the upstream to the downstream wells. Because of the highly heterogeneous spatial distribution of xenobiotics at the test site, a monitoring concept was developed comprising both high-resolution sampling and an integral approach to obtain representative average concentrations. Direct-push techniques were used to gain insight into the fine-scale spatial distribution of the target compounds. An integral pumping test was performed to determine the total xenobiotic mass fluxes along control planes down- and upstream of the leaky sewer. The new monitoring concept helped to obtain robust estimates of xenobiotic mass fluxes into the groundwater.

New England SPARROW Water-Quality Modeling to Assist with the Development of Total Maximum Daily Loads in the Connecticut River Basin

NASA Astrophysics Data System (ADS)

Moore, R. B.; Robinson, K. W.; Simcox, A. C.; Johnston, C. M.

2002-05-01

The U.S. Geological Survey (USGS), in cooperation with the U.S. Environmental Protection Agency (USEPA) and the New England Interstate Water Pollution Control Commission (NEWIPCC), is currently preparing a water-quality model, called SPARROW, to assist in the regional total maximum daily load (TMDL) studies in New England. A model is required to provide estimates of nutrient loads and confidence intervals at unmonitored stream reaches. SPARROW (Spatially Referenced Regressions on Watershed Attributes) is a spatially detailed, statistical model that uses regression equations to relate total phosphorus and nitrogen (nutrient) stream loads to pollution sources and watershed characteristics. These statistical relations are then used to predict nutrient loads in unmonitored streams. The New England SPARROW model is based on a hydrologic network of 42,000 stream reaches and associated watersheds. Point source data are derived from USEPA's Permit Compliance System (PCS). Information about nonpoint sources is derived from data such as fertilizer use, livestock wastes, and atmospheric deposition. Watershed characteristics include land use, streamflow, time-of-travel, stream density, percent wetlands, slope of the land surface, and soil permeability. Preliminary SPARROW results are expected in Spring 2002. The New England SPARROW model is proposed for use in the TMDL determination for nutrients in the Connecticut River Basin, upstream of Connecticut. The model will be used to estimate nitrogen loads from each of the upstream states to Long Island Sound. It will provide estimates and confidence intervals of phosphorus and nitrogen loads, area-weighted yields of nutrients by watershed, sources of nutrients, and the downstream movement of nutrients. This information will be used to (1) understand ranges in nutrient levels in surface waters, (2) identify the environmental factors that affect nutrient levels in streams, (3) evaluate monitoring efforts for better determination of nutrient loads, and (4) evaluate management options for reducing nutrient loads to achieve water-quality goals.

Understanding the relationships among phytoplankton, benthic macroinvertebrates, and water quality variables in peri-urban river systems.

PubMed

Pinto, Uthpala; Maheshwari, Basant L; Morris, E Charles

2014-12-01

In this article, using the Hawkesbury-Nepean River as a case study, the spatial and temporal trends of water quality variables over three sampling surveys in a peri-urban situation are examined for their effect on benthic macroinvertebrate communities and phytoplankton communities and whether phytoplankton and benthic macroinvertebrate species can be used as indicators for river health assessment. For this, the authors monitored the spatial and temporal difference of 10 water quality parameters: temperature, turbidity, pH, dissolved oxygen, electrical conductivity, oxidation reduction potential, total nitrogen, total phosphorus, manganese, and suspended solids. The variability in water quality parameters clearly indicated a complex pattern, depending on the season (interaction p = 0.001), which highlighted how the river condition is stressed at multiple points as a result of anthropogenic effects. In particular, the downstream locations indicated an accumulation of nutrients, the presence of increased sediments, and phytoplankton related variables such as total counts, bio-volumes, chlorophyll-a, and total phosphorus. The patterns of phytoplankton communities varied in a complex way depending on the season (interaction p = 0.001). Abundances of phytoplankton were also found in low concentrations where the water column is not severely disturbed by flow and tide. However, when the water clarity drops resulting from tidal cycles, inflows from tributaries, and intense boating activities, the phytoplankton abundances also increased considerably. On the other hand, benthic macroinvertebrates compositions were significantly different between locations (p = 0.001) with increased abundances associated with upstream sites. Aphanocapsa holsatica and chironomid larvae appeared as the important indicators for upstream and downstream site differences in water quality. Water temperature influenced the phytoplankton community pattern (ρ(w) = 0.408), whereas pH influenced the benthic macroinvertebrate community pattern (ρ(w) = 0.437). The findings of this study provide valuable insights into the interactions of water quality parameters on biotic assemblages and to the extent that benthic macroinvertebrates and phytoplankton assemblages are suitable as indicators for monitoring and assessing peri-urban river health.

Structural Variability of Tropospheric Growth Factors Transforming Mid-latitude Cyclones to Severe Storms over the North Atlantic

NASA Astrophysics Data System (ADS)

Wild, Simon; Befort, Daniel J.; Leckebusch, Gregor C.

2015-04-01

The development of European surface wind storms out of normal mid-latitude cyclones is substantially influenced by upstream tropospheric growth factors over the Northern Atlantic. The main factors include divergence and vorticity advection in the upper troposphere, latent heat release and the presence of instabilities of short baroclinic waves of suitable wave lengths. In this study we examine a subset of these potential growth factors and their related influences on the transformation of extra-tropical cyclones into severe damage prone surface storm systems. Previous studies have shown links between specific growth factors and surface wind storms related to extreme cyclones. In our study we investigate in further detail spatial and temporal variability patterns of these upstream processes at different vertical levels of the troposphere. The analyses will comprise of the three growth factors baroclinicity, latent heat release and upper tropospheric divergence. Our definition of surface wind storms is based on the Storm Severity Index (SSI) alongside a wind tracking algorithm identifying areas of exceedances of the local 98th percentile of the 10m wind speed. We also make use of a well-established extra-tropical cyclone identification and tracking algorithm. These cyclone tracks form the base for a composite analysis of the aforementioned growth factors using ERA-Interim Reanalysis from 1979 - 2014 for the extended winter season (ONDJFM). Our composite analysis corroborates previous similar studies but extends them by using an impact based algorithm for the identification of strong wind systems. Based on this composite analysis we further identify variability patterns for each growth factor most important for the transformation of a cyclone into a surface wind storm. We thus also address the question whether the link between storm intensity and related growth factor anomaly taking into account its spatial variability is stable and can be quantified. While the robustness of our preliminary results is generally dependent on the growth factor investigated, some examples include i) the overall availability of latent heat seems to be less important than its spatial structure around the cyclone core and ii) the variability of upper-tropospheric baroclinicity appears to be highest north of the surface position of the cyclone, especially for those that transform into a surface storm.

Total Dust Deposition Flux During Precipitation in Toyama, Japan, in the Spring of 2009: A Sensitivity Analysis with the NASA GEOS-5 Model

NASA Technical Reports Server (NTRS)

Yasunari, Teppei J.; Colarco, Peter R.; Lau, William K. M.; Osada, Kazuo; Kido, Mizuka; Mahanama, Sarith P. P.; Kim, Kyu-Myong; Da Silva, Arlindo M.

2015-01-01

We compared the observed total dust deposition fluxes during precipitation (TDP) mainly at Toyama in Japan during the period January - April 2009 with results available from four NASA GEOS-5 global model experiments. The modeled results were obtained from three previous experiments and carried out in one experiment, which were all driven by assimilated meteorology and simulating aerosol distributions for the time period. We focus mainly on the observations of two distinct TDP events, which were reported in Osada et al. (2011), at Toyama, Japan, in February (Event B) and March 2009 (Event C). Although all of our GEOS-5 simulations captured aspects of the observed TDP, we found that our low horizontal spatial resolution control experiment performed generally the worst. The other three experiments were run at a higher spatial resolution, with the first differing only in that respect from the control, the second adding imposed a prescribed corrected precipitation product, and the final experiment adding as well assimilation of aerosol optical depth based on MODIS observations. During Event C, the increased horizontal resolution could increase TDP with precipitation increase. There was no significant improvement, however, due to the imposition of the corrected precipitation product. The simulation that incorporated aerosol data assimilation performed was by far the best for this event, but even so could only reproduce less than half of the observed TDP despite the significantly increased atmospheric dust mass concentrations. All three of the high spatial resolution experiments had higher simulated precipitation at Toyama than was observed and that in the lower resolution control run. During Event B, the aerosol data assimilation run did not perform appreciably better than the other higher resolution simulations, suggesting that upstream conditions (i.e., upstream cloudiness), or vertical or horizontal misplacement of the dust plume did not allow for significant improvement in the simulated aerosol distributions. Furthermore, a detailed comparison of observed hourly precipitation and surface particulate mass concentration data suggests that the observed TDP during Event B was highly dependent on short periods of weak precipitation correlated with elevated dust surface concentrations, important details possibly not captured well in a current global model.

The influence of mixed tree plantations on the nutrition of individual species: a review.

PubMed

Richards, Anna E; Forrester, David I; Bauhus, Jürgen; Scherer-Lorenzen, Michael

2010-09-01

Productivity of tree plantations is a function of the supply, capture and efficiency of use of resources, as outlined in the Production Ecology Equation. Species interactions in mixed-species stands can influence each of these variables. The importance of resource-use efficiency in determining forest productivity has been clearly demonstrated in monocultures; however, substantial knowledge gaps remain for mixtures. This review examines how the physiology and morphology of a given species can vary depending on whether it grows in a mixture or monoculture. We outline how physiological and morphological shifts within species, resulting from interactions in mixtures, may influence the three variables of the Production Ecology Equation, with an emphasis on nutrient resources [nitrogen (N) and phosphorus (P)]. These include (i) resource availability, including soil nutrient mineralization, N₂ fixation and litter decomposition; (ii) proportion of resources captured, resulting from shifts in spatial, temporal and chemical patterns of root dynamics; (iii) resource-use efficiency. We found that more than 50% of mixed-species studies report a shift to greater above-ground nutrient content of species grown in mixtures compared to monocultures, indicating an increase in the proportion of resources captured from a site. Secondly, a meta-analysis showed that foliar N concentrations significantly increased for a given species in a mixture containing N₂-fixing species, compared to a monoculture, suggesting higher rates of photosynthesis and greater resource-use efficiency. Significant shifts in N- and P-use efficiencies of a given species, when grown in a mixture compared to a monoculture, occurred in over 65% of studies where resource-use efficiency could be calculated. Such shifts can result from changes in canopy photosynthetic capacities, changes in carbon allocation or changes to foliar nutrient residence times of species in a mixture. We recommend that future research focus on individual species' changes, particularly with respect to resource-use efficiency (including nutrients, water and light), when trees are grown in mixtures compared to monocultures. A better understanding of processes responsible for changes to tree productivity in mixed-species tree plantations can improve species, and within-species, selection so that the long-term outcome of mixtures is more predictable.

Mixedness determination of rare earth-doped ceramics

NASA Astrophysics Data System (ADS)

Czerepinski, Jennifer H.

The lack of chemical uniformity in a powder mixture, such as clustering of a minor component, can lead to deterioration of materials properties. A method to determine powder mixture quality is to correlate the chemical homogeneity of a multi-component mixture with its particle size distribution and mixing method. This is applicable to rare earth-doped ceramics, which require at least 1-2 nm dopant ion spacing to optimize optical properties. Mixedness simulations were conducted for random heterogeneous mixtures of Nd-doped LaF3 mixtures using the Concentric Shell Model of Mixedness (CSMM). Results indicate that when the host to dopant particle size ratio is 100, multi-scale concentration variance is optimized. In order to verify results from the model, experimental methods that probe a mixture at the micro, meso, and macro scales are needed. To directly compare CSMM results experimentally, an image processing method was developed to calculate variance profiles from electron images. An in-lens (IL) secondary electron image is subtracted from the corresponding Everhart-Thornley (ET) secondary electron image in a Field-Emission Scanning Electron Microscope (FESEM) to produce two phases and pores that can be quantified with 50 nm spatial resolution. A macro was developed to quickly analyze multi-scale compositional variance from these images. Results for a 50:50 mixture of NdF3 and LaF3 agree with the computational model. The method has proven to be applicable only for mixtures with major components and specific particle morphologies, but the macro is useful for any type of imaging that produces excellent phase contrast, such as confocal microscopy. Fluorescence spectroscopy was used as an indirect method to confirm computational results for Nd-doped LaF3 mixtures. Fluorescence lifetime can be used as a quantitative method to indirectly measure chemical homogeneity when the limits of electron microscopy have been reached. Fluorescence lifetime represents the compositional fluctuations of a dopant on the nanoscale while accounting for billions of particles in a fast, non-destructive manner. The significance of this study will show how small-scale fluctuations in homogeneity limit the optimization of optical properties, which can be improved by the proper selection of particle size and mixing method.

A feasibility study on estimation of tissue mixture contributions in 3D arterial spin labeling sequence

NASA Astrophysics Data System (ADS)

Liu, Yang; Pu, Huangsheng; Zhang, Xi; Li, Baojuan; Liang, Zhengrong; Lu, Hongbing

2017-03-01

Arterial spin labeling (ASL) provides a noninvasive measurement of cerebral blood flow (CBF). Due to relatively low spatial resolution, the accuracy of CBF measurement is affected by the partial volume (PV) effect. To obtain accurate CBF estimation, the contribution of each tissue type in the mixture is desirable. In general, this can be obtained according to the registration of ASL and structural image in current ASL studies. This approach can obtain probability of each tissue type inside each voxel, but it also introduces error, which include error of registration algorithm and imaging itself error in scanning of ASL and structural image. Therefore, estimation of mixture percentage directly from ASL data is greatly needed. Under the assumption that ASL signal followed the Gaussian distribution and each tissue type is independent, a maximum a posteriori expectation-maximization (MAP-EM) approach was formulated to estimate the contribution of each tissue type to the observed perfusion signal at each voxel. Considering the sensitivity of MAP-EM to the initialization, an approximately accurate initialization was obtain using 3D Fuzzy c-means method. Our preliminary results demonstrated that the GM and WM pattern across the perfusion image can be sufficiently visualized by the voxel-wise tissue mixtures, which may be promising for the diagnosis of various brain diseases.

Shear viscosity for a heated granular binary mixture at low density.

PubMed

Montanero, José María; Garzó, Vicente

2003-02-01

The shear viscosity for a heated granular binary mixture of smooth hard spheres at low density is analyzed. The mixture is heated by the action of an external driving force (Gaussian thermostat) that exactly compensates for cooling effects associated with the dissipation of collisions. The study is made from the Boltzmann kinetic theory, which is solved by using two complementary approaches. First, a normal solution of the Boltzmann equation via the Chapman-Enskog method is obtained up to first order in the spatial gradients. The mass, heat, and momentum fluxes are determined and the corresponding transport coefficients identified. As in the free cooling case [V. Garzó and J. W. Dufty, Phys. Fluids 14, 1476 (2002)], practical evaluation requires a Sonine polynomial approximation, and here it is mainly illustrated in the case of the shear viscosity. Second, to check the accuracy of the Chapman-Enskog results, the Boltzmann equation is numerically solved by means of the direct simulation Monte Carlo method. The simulation is performed for a system under uniform shear flow, using the Gaussian thermostat to control inelastic cooling. The comparison shows an excellent agreement between theory and simulation over a wide range of values of the restitution coefficients and the parameters of the mixture (masses, concentrations, and sizes).

Concentration of atomic hydrogen in a dielectric barrier discharge measured by two-photon absorption fluorescence

NASA Astrophysics Data System (ADS)

Dvořák, P.; Talába, M.; Obrusník, A.; Kratzer, J.; Dědina, J.

2017-08-01

Two-photon absorption laser-induced fluorescence (TALIF) was utilized for measuring the concentration of atomic hydrogen in a volume dielectric barrier discharge (DBD) ignited in mixtures of Ar, H2 and O2 at atmospheric pressure. The method was calibrated by TALIF of krypton diluted in argon at atmospheric pressure, proving that three-body collisions had a negligible effect on quenching of excited krypton atoms. The diagnostic study was complemented with a 3D numerical model of the gas flow and a zero-dimensional model of the chemistry in order to better understand the reaction kinetics and identify the key pathways leading to the production and destruction of atomic hydrogen. It was determined that the density of atomic hydrogen in Ar-H2 mixtures was in the order of 1021 m-3 and decreased when oxygen was added into the gas mixture. Spatially resolved measurements and simulations revealed a sharply bordered region with low atomic hydrogen concentration when oxygen was added to the gas mixture. At substoichiometric oxygen/hydrogen ratios, this H-poor region is confined to an area close to the gas inlet and it is shown that the size of this region is not only influenced by the chemistry but also by the gas flow patterns. Experimentally, it was observed that a decrease in H2 concentration in the feeding Ar-H2 mixture led to an increase in H production in the DBD.

Gravitational Agglomeration of Post-HCDA LMFBR Nonspherical Aerosols.

DTIC Science & Technology

1980-12-01

equations for two particle motions are developed . A computer program NGCEFF is constructed., the Navier-Stokes equation is solved by the finite difference...dynamic equations for two particle motions are developed . A computer program NGCEFF I is constructed, the Navier-Stokes equation is solved by the...spatial inhomogeneities for the aerosol. Thus, following an HCDA, an aerosol mixture of sodium compounds, fuel and core structural materials will

Indicators of burn severity at extended temporal scales: a decade of ecosystem response in mixed-conifer forests of western Montana

Treesearch

Sarah A. Lewis; Andrew T. Hudak; Peter R. Robichaud; Penelope Morgan; Kevin L. Satterberg; Eva K. Strand; Alistair M. S. Smith; Joseph A. Zamudio; Leigh B. Lentile

2017-01-01

We collected field and remotely sensed data spanning 10 years after three 2003 Montana wildfires to monitor ecological change across multiple temporal and spatial scales. Multiple endmember spectral mixture analysis was used to create post-fire maps of: char, soil, green (GV) and non-photosynthetic (NPV) vegetation from high-resolution 2003 hyperspectral (HS) and 2007...

Inverse modelling of fluvial sediment connectivity identifies characteristics and spatial distribution of sediment sources in a large river network.

NASA Astrophysics Data System (ADS)

Schmitt, R. J. P.; Bizzi, S.; Kondolf, G. M.; Rubin, Z.; Castelletti, A.

2016-12-01

Field and laboratory evidence indicates that the spatial distribution of transport in both alluvial and bedrock rivers is an adaptation to sediment supply. Sediment supply, in turn, depends on spatial distribution and properties (e.g., grain sizes and supply rates) of individual sediment sources. Analyzing the distribution of transport capacity in a river network could hence clarify the spatial distribution and properties of sediment sources. Yet, challenges include a) identifying magnitude and spatial distribution of transport capacity for each of multiple grain sizes being simultaneously transported, and b) estimating source grain sizes and supply rates, both at network scales. Herein, we approach the problem of identifying the spatial distribution of sediment sources and the resulting network sediment fluxes in a major, poorly monitored tributary (80,000 km2) of the Mekong. Therefore, we apply the CASCADE modeling framework (Schmitt et al. (2016)). CASCADE calculates transport capacities and sediment fluxes for multiple grainsizes on the network scale based on remotely-sensed morphology and modelled hydrology. CASCADE is run in an inverse Monte Carlo approach for 7500 random initializations of source grain sizes. In all runs, supply of each source is inferred from the minimum downstream transport capacity for the source grain size. Results for each realization are compared to sparse available sedimentary records. Only 1 % of initializations reproduced the sedimentary record. Results for these realizations revealed a spatial pattern in source supply rates, grain sizes, and network sediment fluxes that correlated well with map-derived patterns in lithology and river-morphology. Hence, we propose that observable river hydro-morphology contains information on upstream source properties that can be back-calculated using an inverse modeling approach. Such an approach could be coupled to more detailed models of hillslope processes in future to derive integrated models of hillslope production and fluvial transport processes, which is particularly useful to identify sediment provenance in poorly monitored river basins.

Tidal river sediments in the Washington, D.C. area. 11. Distribution and sources of organic containmants

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wade, T.L.; Velinsky, D.J.; Reinharz, E.

1994-06-01

Concentrations of aliphatic, aromatic, and chlorinated hydrocarbons were determined from 33 surface-sediment samples taken from the Tidal Basin, Washington Ship Channel, and the Anacostia and Potomac rivers in Washington, D.C. In conjunction with these samples, selected storm sewers and outfalls also were sampled to help elucidate general sources of contamination to the area. All of the sediments contained detectable concentrations of aliphatic and aromatic hydrocarbons, DDT (total dichlorodiphenytrichloroethande), DDE (dichlorodiphenyldichloroethene), DDD (dichlorodiphenyldichloroethane), PCBx (total polychlorinated biphenyls) and total chlordanes (oxy-, {alpha}-, and {gamma}-chlordane and cis + trans-nonachlor). Sediment concentrations of most contaminants were highest in the Anacostia River just downstreammore » of the Washington Navy Yard, except for total chlordane, which appeared to have upstream sources in addition to storm and combined sewer runoff. This area has the highest number of storm and combined sewer outfalls in the river. Potomac River stations had lower concentrations than other stations. Polycyclic aromatic hydrocarbons, saturated hydrocarbons, and the unresolved complex mixture (UCM) distributions reflect mixtures of combustion products and direct discharges of petroleum products. Sources of PCBs appear to be related to specific outfalls, while hydrocarbon inputs, especially PAHs, are diffuse, and may be related to street runoff. This study indicates that in large urban areas, nonpoint sources deliver substantial amounts of contaminants to ecosystems through storm and combined sewer systems, and control of these inputs must be addressed. 33 refs., 6 figs., 3 tabs.« less

Spatial electron density and electric field strength measurements in microwave cavity experiments

NASA Technical Reports Server (NTRS)

Peters, M.; Rogers, J.; Whitehair, S.; Asmussen, J.; Kerber, R.

1984-01-01

Measurements of electron density and electric field strength have been made in an argon plasma contained in a resonant microwave cavity at 2.45 GHz. Spatial measurements of electron density, n sub e, are correlated with fluorescence observations of the discharge. Measurements of n sub e were made with Stark broadening and compared with n sub 3 calculated from measured plasma conductivity. Additional measurements of n sub 3 as a function of pressure and in mixtures of argon and oxygen are presented for pressures from 10 Torr to 1 atm. Measurements in flowing gases and in static systems are presented. In addition, limitations of these measurements are identified.

Gas separation using ultrasound and light absorption

DOEpatents

Sinha, Dipen N [Los Alamos, NM

2012-07-31

An apparatus and method for separating a chosen gas from a mixture of gases having no moving parts and utilizing no chemical processing is described. The separation of particulates from fluid carriers thereof has been observed using ultrasound. In a similar manner, molecular species may be separated from carrier species. It is also known that light-induced drift may separate light-absorbing species from carrier species. Therefore, the combination of temporally pulsed absorption of light with ultrasonic concentration is expected to significantly increase the efficiency of separation by ultrasonic concentration alone. Additionally, breaking the spatial symmetry of a cylindrical acoustic concentrator decreases the spatial distribution of the concentrated particles, and increases the concentration efficiency.

Spatially resolved high-resolution x-ray spectroscopy of high-current plasma-focus discharges.

PubMed

Zając, S; Rzadkiewicz, J; Rosmej, O; Scholz, M; Yongtao, Zhao; Gójska, A; Paduch, M; Zielińska, E

2010-10-01

Soft x-ray emission from a Mather-type plasma-focus device (PF-1000) operated at ∼400 kJ was measured. The high density and temperature plasma were generated by the discharge in the deuterium-argon gas mixture in the modified (high-current) plasma-focus configuration. A spherically bent mica crystal spectrograph viewing the axial output of the pinch region was used to measure the x-ray spectra. Spatially resolved spectra including the characteristic x-ray lines of highly ionized Ar and continua were recorded by means of an x-ray film. The x-ray emission of PF-1000 device was studied at different areas of the pinch.

Spatially resolved high-resolution x-ray spectroscopy of high-current plasma-focus discharges

DOE Office of Scientific and Technical Information (OSTI.GOV)

ZajaPc, S.; Rzadkiewicz, J.; Scholz, M.

Soft x-ray emission from a Mather-type plasma-focus device (PF-1000) operated at {approx}400 kJ was measured. The high density and temperature plasma were generated by the discharge in the deuterium-argon gas mixture in the modified (high-current) plasma-focus configuration. A spherically bent mica crystal spectrograph viewing the axial output of the pinch region was used to measure the x-ray spectra. Spatially resolved spectra including the characteristic x-ray lines of highly ionized Ar and continua were recorded by means of an x-ray film. The x-ray emission of PF-1000 device was studied at different areas of the pinch.

Patterned graphene functionalization via mask-free scanning of micro-plasma jet under ambient condition

NASA Astrophysics Data System (ADS)

Ye, Dong; Wu, Shu-Qun; Yu, Yao; Liu, Lin; Lu, Xin-Pei; Wu, Yue

2014-03-01

In this work, a mask-free method is introduced for patterned nitrogen doping of graphene using a micro-plasma jet under ambient condition. Raman and X-ray photoelectron spectroscopy spectra indicate that nitrogen atoms are incorporated into the graphene lattice with the two-dimensional spatial distribution precisely controlled in the range of mm down to 10 μm. Since the chemistry of the micro-plasma jet can be controlled by the choice of the gas mixture, this direct writing process with micro-plasma jet can be a versatile approach for patterned functionalization of graphene with high spatial resolution. This could have promising applications in graphene-based electronics.

Some Finite Difference Solutions of the Laminar Compressible Boundary Layer Showing the Effects of Upstream Transpiration Cooling

NASA Technical Reports Server (NTRS)

Howe, John T.

1959-01-01

Three numerical solutions of the partial differential equations describing the compressible laminar boundary layer are obtained by the finite difference method described in reports by I. Flugge-Lotz, D.C. Baxter, and this author. The solutions apply to steady-state supersonic flow without pressure gradient, over a cold wall and over an adiabatic wall, both having transpiration cooling upstream, and over an adiabatic wall with upstream cooling but without upstream transpiration. It is shown that for a given upstream wall temperature, upstream transpiration cooling affords much better protection to the adiabatic solid wall than does upstream cooling without transpiration. The results of the numerical solutions are compared with those of approximate solutions. The thermal results of the finite difference solution lie between the results of Rubesin and Inouye, and those of Libby and Pallone. When the skin-friction results of one finite difference solution are used in the thermal analysis of Rubesin and Inouye, improved agreement between the thermal results of the two methods of solution is obtained.

Spatial Phase Imaging

NASA Technical Reports Server (NTRS)

2006-01-01

Frequently, scientists grow crystals by dissolving a protein in a specific liquid solution, and then allowing that solution to evaporate. The methods used next have been, variously, invasive (adding a dye that is absorbed by the protein), destructive (crushing protein/salt-crystal mixtures and observing differences between the crushing of salt and protein), or costly and time-consuming (X-ray crystallography). In contrast to these methods, a new technology for monitoring protein growth, developed in part through NASA Small Business Innovation Research (SBIR) funding from Marshall Space Flight Center, is noninvasive, nondestructive, rapid, and more cost effective than X-ray analysis. The partner for this SBIR, Photon-X, Inc., of Huntsville, Alabama, developed spatial phase imaging technology that can monitor crystal growth in real time and in an automated mode. Spatial phase imaging scans for flaws quickly and produces a 3-D structured image of a crystal, showing volumetric growth analysis for future automated growth.

A Comparison of Local Variance, Fractal Dimension, and Moran's I as Aids to Multispectral Image Classification

NASA Technical Reports Server (NTRS)

Emerson, Charles W.; Sig-NganLam, Nina; Quattrochi, Dale A.

2004-01-01

The accuracy of traditional multispectral maximum-likelihood image classification is limited by the skewed statistical distributions of reflectances from the complex heterogenous mixture of land cover types in urban areas. This work examines the utility of local variance, fractal dimension and Moran's I index of spatial autocorrelation in segmenting multispectral satellite imagery. Tools available in the Image Characterization and Modeling System (ICAMS) were used to analyze Landsat 7 imagery of Atlanta, Georgia. Although segmentation of panchromatic images is possible using indicators of spatial complexity, different land covers often yield similar values of these indices. Better results are obtained when a surface of local fractal dimension or spatial autocorrelation is combined as an additional layer in a supervised maximum-likelihood multispectral classification. The addition of fractal dimension measures is particularly effective at resolving land cover classes within urbanized areas, as compared to per-pixel spectral classification techniques.

Palmitoylation of LIM Kinase-1 ensures spine-specific actin polymerization and morphological plasticity

PubMed Central

George, Joju; Soares, Cary; Montersino, Audrey; Beique, Jean-Claude; Thomas, Gareth M

2015-01-01

Precise regulation of the dendritic spine actin cytoskeleton is critical for neurodevelopment and neuronal plasticity, but how neurons spatially control actin dynamics is not well defined. Here, we identify direct palmitoylation of the actin regulator LIM kinase-1 (LIMK1) as a novel mechanism to control spine-specific actin dynamics. A conserved palmitoyl-motif is necessary and sufficient to target LIMK1 to spines and to anchor LIMK1 in spines. ShRNA knockdown/rescue experiments reveal that LIMK1 palmitoylation is essential for normal spine actin polymerization, for spine-specific structural plasticity and for long-term spine stability. Palmitoylation is critical for LIMK1 function because this modification not only controls LIMK1 targeting, but is also essential for LIMK1 activation by its membrane-localized upstream activator PAK. These novel roles for palmitoylation in the spatial control of actin dynamics and kinase signaling provide new insights into structural plasticity mechanisms and strengthen links between dendritic spine impairments and neuropathological conditions. DOI: http://dx.doi.org/10.7554/eLife.06327.001 PMID:25884247

Development of Residual Gas Profile Monitors at GSI

NASA Astrophysics Data System (ADS)

Giacomini, T.; Barabin, S.; Forck, P.; Liakin, D.; Skachkov, V.

2004-11-01

Beam profile measurements at modern ion synchrotrons and storage rings require high timing performances on a turn-by-turn basis. High spatial resolutions are essential for cold beams and beamwidth measurings. The currently used RGM supported very interesting measurements and applications. Due to the readout technology the spatial and time resolution is limited. To meet the expanded demands a more comprehensive device is under development. It will be an all-purpose residual gas monitor to cover the wide range of beam currents and transversal particle distributions. Due to the fast profile detection it will operate on primary electrons after residual gas ionization. A magnetic field of 100 mT binds them to the ionization point inside 0.1-mm orbits. The high-resolution mode will be read out by a digital CCD camera with an upstream MCP-phosphor screen assembly. It is planned to read out the fast turn-by-turn mode by an array of 100 photodiodes with a resolution of 1 mm. Every photodiode is equipped with an amplifier-digitizer device providing a frame rate of ˜ 10 MSamples/s.

Dense flow around a sphere moving into a cloud of grains

NASA Astrophysics Data System (ADS)

Gondret, Philippe; Faure, Sylvain; Lefebvre-Lepot, Aline; Seguin, Antoine

2017-06-01

A bidimensional simulation of a sphere moving at constant velocity into a cloud of smaller spherical grains without gravity is presented with a non-smooth contact dynamics method. A dense granular "cluster" zone of about constant solid fraction builds progressively around the moving sphere until a stationary regime appears with a constant upstream cluster size that increases with the initial solid fraction ϕ0 of the cloud. A detailed analysis of the local strain rate and local stress fields inside the cluster reveals that, despite different spatial variations of strain and stresses, the local friction coeffcient μ appears to depend only on the local inertial number I as well as the local solid fraction ϕ, which means that a local rheology does exist in the present non parallel flow. The key point is that the spatial variations of I inside the cluster does not depend on the sphere velocity and explore only a small range between about 10-2 and 10-1. The influence of sidewalls is then investigated on the flow and the forces.

Quantifying a cellular automata simulation of electric vehicles

NASA Astrophysics Data System (ADS)

Hill, Graeme; Bell, Margaret; Blythe, Phil

2014-12-01

Within this work the Nagel-Schreckenberg (NS) cellular automata is used to simulate a basic cyclic road network. Results from SwitchEV, a real world Electric Vehicle trial which has collected more than two years of detailed electric vehicle data, are used to quantify the results of the NS automata, demonstrating similar power consumption behavior to that observed in the experimental results. In particular the efficiency of the electric vehicles reduces as the vehicle density increases, due in part to the reduced efficiency of EVs at low speeds, but also due to the energy consumption inherent in changing speeds. Further work shows the results from introducing spatially restricted speed restriction. In general it can be seen that induced congestion from spatially transient events propagates back through the road network and alters the energy and efficiency profile of the simulated vehicles, both before and after the speed restriction. Vehicles upstream from the restriction show a reduced energy usage and an increased efficiency, and vehicles downstream show an initial large increase in energy usage as they accelerate away from the speed restriction.

Spatial Studies of Ion Beams in an Expanding Plasma

NASA Astrophysics Data System (ADS)

Aguirre, Evan; Good, Timothy; Scime, Earl; Thompson, Derek

2017-10-01

We report spatially resolved perpendicular and parallel ion velocity distribution function (IVDF) measurements in an expanding argon helicon plasma. The parallel IVDFs, obtained through laser induced fluorescence (LIF), show an ion beam with v 8 km/s flowing downstream that is confined to the center of the discharge. The ion beam is confined to within a few centimeters radially and is measurable for tens of centimeters axially before the LIF signal fades, likely a result of metastable quenching of the beam ions. The axial ion beam velocity slows in agreement with collisional processes. The perpendicular IVDFs show an ion population with a radially outward flow that increases with radial location. The DC electric field, electron temperature, and the plasma density in the double layer plume are all consistent with magnetic field aligned structures. The upstream and downstream electric field measurements show clear evidence of an ion hole that maps along the magnetic field at the edge of the plasma. Current theories and simulations of double layers, which are one-dimensional, completely miss these critically important two-dimensional features.

Megamap: flexible representation of a large space embedded with nonspatial information by a hippocampal attractor network

PubMed Central

Zhang, Kechen

2016-01-01

The problem of how the hippocampus encodes both spatial and nonspatial information at the cellular network level remains largely unresolved. Spatial memory is widely modeled through the theoretical framework of attractor networks, but standard computational models can only represent spaces that are much smaller than the natural habitat of an animal. We propose that hippocampal networks are built on a basic unit called a “megamap,” or a cognitive attractor map in which place cells are flexibly recombined to represent a large space. Its inherent flexibility gives the megamap a huge representational capacity and enables the hippocampus to simultaneously represent multiple learned memories and naturally carry nonspatial information at no additional cost. On the other hand, the megamap is dynamically stable, because the underlying network of place cells robustly encodes any location in a large environment given a weak or incomplete input signal from the upstream entorhinal cortex. Our results suggest a general computational strategy by which a hippocampal network enjoys the stability of attractor dynamics without sacrificing the flexibility needed to represent a complex, changing world. PMID:27193320

Landscape-scale spatial abundance distributions discriminate core from random components of boreal lake bacterioplankton.

PubMed

Niño-García, Juan Pablo; Ruiz-González, Clara; Del Giorgio, Paul A

2016-12-01

Aquatic bacterial communities harbour thousands of coexisting taxa. To meet the challenge of discriminating between a 'core' and a sporadically occurring 'random' component of these communities, we explored the spatial abundance distribution of individual bacterioplankton taxa across 198 boreal lakes and their associated fluvial networks (188 rivers). We found that all taxa could be grouped into four distinct categories based on model statistical distributions (normal like, bimodal, logistic and lognormal). The distribution patterns across lakes and their associated river networks showed that lake communities are composed of a core of taxa whose distribution appears to be linked to in-lake environmental sorting (normal-like and bimodal categories), and a large fraction of mostly rare bacteria (94% of all taxa) whose presence appears to be largely random and linked to downstream transport in aquatic networks (logistic and lognormal categories). These rare taxa are thus likely to reflect species sorting at upstream locations, providing a perspective of the conditions prevailing in entire aquatic networks rather than only in lakes. © 2016 John Wiley & Sons Ltd/CNRS.

Multi-Species Fluxes for the Parallel Quiet Direct Simulation (QDS) Method

NASA Astrophysics Data System (ADS)

Cave, H. M.; Lim, C.-W.; Jermy, M. C.; Krumdieck, S. P.; Smith, M. R.; Lin, Y.-J.; Wu, J.-S.

2011-05-01

Fluxes of multiple species are implemented in the Quiet Direct Simulation (QDS) scheme for gas flows. Each molecular species streams independently. All species are brought to local equilibrium at the end of each time step. The multi species scheme is compared to DSMC simulation, on a test case of a Mach 20 flow of a xenon/helium mixture over a forward facing step. Depletion of the heavier species in the bow shock and the near-wall layer are seen. The multi-species QDS code is then used to model the flow in a pulsed-pressure chemical vapour deposition reactor set up for carbon film deposition. The injected gas is a mixture of methane and hydrogen. The temporal development of the spatial distribution of methane over the substrate is tracked.

Combining polar organic chemical integrative samplers (POCIS) with toxicity testing to evaluate pesticide mixture effects on natural phototrophic biofilms.

PubMed

Pesce, Stéphane; Morin, Soizic; Lissalde, Sophie; Montuelle, Bernard; Mazzella, Nicolas

2011-03-01

Polar organic chemical integrative samplers (POCIS) are valuable tools in passive sampling methods for monitoring polar organic pesticides in freshwaters. Pesticides extracted from the environment using such methods can be used to toxicity tests. This study evaluated the acute effects of POCIS extracts on natural phototrophic biofilm communities. Our results demonstrate an effect of POCIS pesticide mixtures on chlorophyll a fluorescence, photosynthetic efficiency and community structure. Nevertheless, the range of biofilm responses differs according to origin of the biofilms tested, revealing spatial variations in the sensitivity of natural communities in the studied stream. Combining passive sampler extracts with community-level toxicity tests offers promising perspectives for ecological risk assessment. Copyright © 2010 Elsevier Ltd. All rights reserved.

Functional magnetic resonance imaging examination of two modular architectures for switching multiple internal models.

PubMed

Imamizu, Hiroshi; Kuroda, Tomoe; Yoshioka, Toshinori; Kawato, Mitsuo

2004-02-04

An internal model is a neural mechanism that can mimic the input-output properties of a controlled object such as a tool. Recent research interests have moved on to how multiple internal models are learned and switched under a given context of behavior. Two representative computational models for task switching propose distinct neural mechanisms, thus predicting different brain activity patterns in the switching of internal models. In one model, called the mixture-of-experts architecture, switching is commanded by a single executive called a "gating network," which is different from the internal models. In the other model, called the MOSAIC (MOdular Selection And Identification for Control), the internal models themselves play crucial roles in switching. Consequently, the mixture-of-experts model predicts that neural activities related to switching and internal models can be temporally and spatially segregated, whereas the MOSAIC model predicts that they are closely intermingled. Here, we directly examined the two predictions by analyzing functional magnetic resonance imaging activities during the switching of one common tool (an ordinary computer mouse) and two novel tools: a rotated mouse, the cursor of which appears in a rotated position, and a velocity mouse, the cursor velocity of which is proportional to the mouse position. The switching and internal model activities temporally and spatially overlapped each other in the cerebellum and in the parietal cortex, whereas the overlap was very small in the frontal cortex. These results suggest that switching mechanisms in the frontal cortex can be explained by the mixture-of-experts architecture, whereas those in the cerebellum and the parietal cortex are explained by the MOSAIC model.

Dispersal and population state of an endangered island lizard following a conservation translocation.

PubMed

Angeli, Nicole F; Lundgren, Ian F; Pollock, Clayton G; Hillis-Starr, Zandy M; Fitzgerald, Lee A

2018-03-01

Population size is widely used as a unit of ecological analysis, yet to estimate population size requires accounting for observed and latent heterogeneity influencing dispersion of individuals across landscapes. In newly established populations, such as when animals are translocated for conservation, dispersal and availability of resources influence patterns of abundance. We developed a process to estimate population size using N-mixture models and spatial models for newly established and dispersing populations. We used our approach to estimate the population size of critically endangered St. Croix ground lizards (Ameiva polops) five years after translocation of 57 individuals to Buck Island, an offshore island of St. Croix, United States Virgin Islands. Estimates of population size incorporated abiotic variables, dispersal limits, and operative environmental temperature available to the lizards to account for low species detection. Operative environmental temperature and distance from the translocation site were always important in fitting the N-mixture model indicating effects of dispersal and species biology on estimates of population size. We found that the population is increasing its range across the island by 5-10% every six months. We spatially interpolated site-specific abundance from the N-mixture model to the entire island, and we estimated 1,473 (95% CI, 940-1,802) St. Croix ground lizards on Buck Island in 2013 corresponding to survey results. This represents a 26-fold increase since the translocation. We predicted the future dispersal of the lizards to all habitats on Buck Island, with the potential for the population to increase by another five times in the future. Incorporating biologically relevant covariates as explicit parameters in population models can improve predictions of population size and the future spread of species introduced to new localities. © 2018 by the Ecological Society of America.

Large-Eddy Simulation of an n-Dodecane Spray Flame Under Different Ambient Oxygen Conditions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pei, Yuanjiang; Hu, Bing; Som, Sibendu

2016-03-16

An n-dodecane spray flame was simulated using a dynamic structure large eddy simulation (LES) model coupled with a detailed chemistry combustion model to understand the ignition processes and the quasi-steady state flame structures. This study focuses on the effect of different ambient oxygen concentrations, 13%, 15% and 21% at an ambient temperature of 900 K and an ambient density of 22.8 kg/m3, which are typical diesel-engine relevant conditions with different levels of exhaust gas recirculation (EGR). The liquid spray was treated with a traditional Lagrangian method. A 103-species skeletal mechanism was used for the n-dodecane chemical kinetic model. It ismore » observed that the main ignitions occur in rich mixture and the flames are thickened around 35 to 40 mm off the spray axis due to the enhanced turbulence induced by the strong recirculation upstream, just behind the head of the flames at different oxygen concentrations. At 1 ms after the start of injection, the soot production is dominated by the broader region of high temperature in rich mixture instead of the stronger oxidation of the high peak temperature. Multiple realizations were performed for the 15% O2 condition to understand the realization to realization variation and to establish best practices for ensembleaveraging diesel spray flames. Two indexes are defined. The structure-similarity index analysis suggests at least 5 realizations are needed to obtain 99% similarity for mixture fraction if the average of 16 realizations are used as the target at 0.8 ms. However, this scenario may be different for different scalars of interest. It is found that 6 realizations would be enough to reach 99% of similarity for temperature, while 8 and 14 realizations are required to achieve 99% similarity for soot and OH mass fraction, respectively. Similar findings are noticed at 1 ms. More realizations are needed for the magnitude-similarity index for the similar level of similarity as the structure-similarity index« less

Effects of H{sub 2} enrichment on the propagation characteristics of CH{sub 4}-air triple flames

DOE Office of Scientific and Technical Information (OSTI.GOV)

Briones, Alejandro M.; Aggarwal, Suresh K.; Katta, Viswanath R.

The effects of H{sub 2} enrichment on the propagation of laminar CH{sub 4}-air triple flames in axisymmetric coflowing jets are numerically investigated. A comprehensive, time-dependent computational model, which employs a detailed description of chemistry and transport, is used to simulate the transient ignition and flame propagation phenomena. Flames are ignited in a jet-mixing layer far downstream of the burner. Following ignition, a well-defined triple flame is formed that propagates upstream along the stoichiometric mixture fraction line with a nearly constant displacement velocity. As the flame approaches the burner, it transitions to a double flame, and subsequently to a burner-stabilized nonpremixedmore » flame. Predictions are validated using measurements of the displacement flame velocity. As the H{sub 2} concentration in the fuel blend is increased, the displacement flame velocity and local triple flame speed increase progressively due to the enhanced chemical reactivity, diffusivity, and preferential diffusion caused by H{sub 2} addition. In addition, the flammability limits associated with the triple flames are progressively extended with the increase in H{sub 2} concentration. The flame structure and flame dynamics are also markedly modified by H{sub 2} enrichment, which substantially increases the flame curvature and mixture fraction gradient, as well as the hydrodynamic and curvature-induced stretch near the triple point. For all the H{sub 2}-enriched methane-air flames investigated in this study, there is a negative correlation between flame speed and stretch, with the flame speed decreasing almost linearly with stretch, consistent with previous studies. The H{sub 2} addition also modifies the flame sensitivity to stretch, as it decreases the Markstein number (Ma), implying an increased tendency toward diffusive-thermal instability (i.e. Ma {yields} 0). These results are consistent with the previously reported experimental results for outwardly propagating spherical flames burning a mixture of natural gas and hydrogen. (author)« less

Initial Geomorphic Responses to Removal of Milltown Dam, Clark Fork River, Montana, USA

NASA Astrophysics Data System (ADS)

Wilcox, A. C.; Brinkerhoff, D.; Woelfle-Erskine, C.

2008-12-01

The removal of Milltown Dam on the Clark Fork River, Montana, USA, is creating a field-scale experiment on upstream and downstream responses to dam removal and on how gravel-bed rivers respond to sediment pulses. Milltown Dam was removed in 2008, reconnecting the Clark Fork River to its upstream basin in terms of sediment transport and fish passage. This dam removal is especially notable because (1) it is the largest dam removal to date in the United States in terms of the volume of reservoir sediment potentially available for downstream transport (over 3 million m3; 1.7 million m3 are being mechanically removed); and (2) the dam is the downstream end of the largest Superfund site in the United States, the Clark Fork Complex, and reservoir sediments are composed largely of contaminated mine tailings. Data collection on pre- and post-dam removal channel morphology, bed sediment characteristics, and sediment loads are being used to investigate spatial and temporal patterns of sediment transport and deposition associated with this dam removal. In the first several months following breaching of the dam, snowmelt runoff with a 3-year recurrence interval peak caused substantial erosion and downstream transport of metals-laden sediments from Milltown reservoir. Reservoir sediments in the Clark Fork arm of Milltown reservoir eroded at levels far exceeding modeling predictions as a result of both incision to the new base level created by dam removal and bank retreat of over 200 m in reaches upstream of a constructed bypass reach and remediation area. Copper and other metals in these eroded reservoir sediments provide a tracer for identifying whether sediment deposits observed downstream of the dam originated from Milltown reservoir or uncontaminated tributaries and indicate that Milltown sediments have reached over 200 km downstream. Downstream deposition has been greatest along channel margins and in side-channel areas, whereas the transport capacity of the active channel has limited channel changes there.

Hydraulics of outburst floods spilling over a steep-walled canyon: Implications for paleo-discharges on Mars

NASA Astrophysics Data System (ADS)

Lapotre, Mathieu; Lamb, Michael

2013-04-01

Canyons carved by outburst floods are common landforms on Earth and Mars. These canyons are generally found in fractured basalts and jointed sedimentary rocks. Flood-carved canyons commonly have steep headwalls and a roughly constant width, and are often thought to have formed from upstream headwall propagation due to waterfall erosion. Because morphology is readily available from satellite imagery, these canyons offer a unique opportunity to quantify the discharge of rare, catastrophic paleo-floods on Earth and Mars. However, mechanistic relationships that relate canyon size to flood discharge have yet to be developed. We propose that the width of a canyon headwall in fractured rock is set by the spatial distribution of erosion around the rim of the canyon, which is controlled by the distribution of shear stresses induced by the overflowing water as it is focused into the canyon head. We test this hypothesis by performing a series of numerical simulations of flood-water focusing using ANUGA Hydro, a 2D-depth averaged, fully turbulent, hydraulic numerical modeling suite allowing for Froude-number transitions. The numerical simulations were designed to explore five dimensionless variables: the aspect ratio of the canyon (length normalized by width), the canyon width to flood-water width ratio, the canyon width to normal-flow depth ratio, the Froude number, and the topographic gradient upstream of the canyon. Preliminary results show that flow focusing leads to increased shear stresses at the canyon head compared to the sides of the canyon for subcritical floods and higher canyon aspect ratios. This suggests that proto-canyons start growing from a topographic defect in all directions until they reach a critical length for the side walls to dry. Once this critical length is attained, canyons focus most of the flood waters into their heads, and propagate upstream only, maintaining roughly constant widths. Preliminary results suggest that canyon width may be used to reconstruct the discharge of paleo-flood events on Mars and Earth.