Characterization of Upper-Troposphere Water Vapor Measurements during AFWEX Using LASE

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ferrare, Richard; Browell, E. V.; Ismail, S.

Water vapor profiles from NASA's Lidar Atmospheric Sensing Experiment (LASE) system acquired during the ARM/FIRE Water Vapor Experiment (AFWEX) are used to characterize upper troposphere water vapor (UTWV) measured by ground-based Raman lidars, radiosondes, and in situ aircraft sensors over the Department of Energy Atmospheric Radiation Measurement (ARM) Southern Great Plains (SGP) site in northern Oklahoma. LASE was deployed from the NASA DC-8 aircraft and measured water vapor over the ARM SGP Central Facility (CF) site during seven flights between November 27 and December 10, 2000. Initially, the DOE ARM SGP Cloud and Radiation Testbed (CART) Raman lidar (CARL) UTWVmore » profiles were about 5-7% wetter than LASE in the upper troposphere, and the Vaisala RS80-H radiosonde profiles were about 10% drier than LASE between 8-12 km. Scaling the Vaisala water vapor profiles to match the precipitable water vapor (PWV) measured by the ARM SGP microwave radiometer (MWR) did not change these results significantly. By accounting for an overlap correction of the CARL water vapor profiles and by employing schemes designed to correct the Vaisala RS80-H calibration method and account for the time response of the Vaisala RS80H water vapor sensor, the average differences between the CARL and Vaisala radiosonde upper troposphere water vapor profiles are reduced to about 5%, which is within the ARM goal of mean differences of less than 10%. The LASE and DC-8 in situ Diode Laser Hygrometer (DLH) UTWV measurements generally agreed to within about 3 to 4%. The DC-8 in situ frost point cryogenic hygrometer and Snow White chilled mirror measurements were drier than the LASE, Raman lidars, and corrected Vaisala RS80H measurements by about 10-25% and 10-15%, respectively. Sippican (formerly VIZ manufacturing) carbon hygristor radiosondes exhibited large variabilities and poor agreement with the other measurements. PWV derived from the LASE profiles agreed to within about 3% on average

Assessing the quality of humidity measurements from global operational radiosonde sensors

NASA Astrophysics Data System (ADS)

Moradi, Isaac; Soden, Brian; Ferraro, Ralph; Arkin, Phillip; Vömel, Holger

2013-07-01

The quality of humidity measurements from global operational radiosonde sensors in upper, middle, and lower troposphere for the period 2000-2011 were investigated using satellite observations from three microwave water vapor channels operating at 183.31±1, 183.31±3, and 183.31±7 GHz. The radiosonde data were partitioned based on sensor type into 19 classes. The satellite brightness temperatures (Tb) were simulated using radiosonde profiles and a radiative transfer model, then the radiosonde simulated Tb's were compared with the observed Tb's from the satellites. The surface affected Tb's were excluded from the comparison due to the lack of reliable surface emissivity data at the microwave frequencies. Daytime and nighttime data were examined separately to see the possible effect of daytime radiation bias on the sonde data. The error characteristics among different radiosondes vary significantly, which largely reflects the differences in sensor type. These differences are more evident in the mid-upper troposphere than in the lower troposphere, mainly because some of the sensors stop responding to tropospheric humidity somewhere in the upper or even in the middle troposphere. In the upper troposphere, most sensors have a dry bias but Russian sensors and a few other sensors including GZZ2, VZB2, and RS80H have a wet bias. In middle troposphere, Russian sensors still have a wet bias but all other sensors have a dry bias. All sensors, including Russian sensors, have a dry bias in lower troposphere. The systematic and random errors generally decrease from upper to lower troposphere. Sensors from China, India, Russia, and the U.S. have a large random error in upper troposphere, which indicates that these sensors are not suitable for upper tropospheric studies as they fail to respond to humidity changes in the upper and even middle troposphere. Overall, Vaisala sensors perform better than other sensors throughout the troposphere exhibiting the smallest systematic and

Large 0/12 GMT Differences of US Vaisala RS80 Observations

NASA Technical Reports Server (NTRS)

Redder, Chris; Atlas, Robert (Technical Monitor)

2002-01-01

The daily differences between the temperatures and heights taken at 0 GMT and 12 GMT by Vaisala RS80 rawinsondes have been calculated. The observations were obtained during selected months from 1998 - 2002 over North America, Europe and Australia. The daily differences are defined by the formula, Delta T = Delta T(sub 0) - 0.5(T(sub -12) - T(sub +12)) where AT is the 0/12 GMT difference, T(sub 0) is the 0 GMT observation and T(sub -12) and T(sub +12) are the 12 GMT observations taken just prior and after the 0 GMT synoptic time. If T(sub +12) is missing then Delta T = T(sub 0) - T(sub -12). A similar expression is used if T(sub -12) is missing. Monthly averages of the increments at each station that launch RS80 rawinsondes are then calculated. The results show positive systematic differences in the stratosphere with values as high as 5 K and 150 m at 10 hPa over the central United States. The values remain generally positive and gradually decrease as the levels descend into the upper troposphere but are still significant. In addition, the maximum at each level is just westward of 90 W at the highest levels and just eastward in the troposphere with smaller values along both coasts. In Canada as well as in Europe and Australia the differences are much smaller with no systematic patterns similar to those that exist over the contiguous United States. Time-series plots of the temperatures and heights at select stations in the United States show that the observed values taken at 0 GMT are consistently higher than those at 12 GMT. Over Canada the differences become much less apparent and some cases non-existent. The observations were obtained through National Centers for Environmental Prediction (NCEP) but were checked with data from other sources to verify that no modifications were made other than those at the stations. Since the data from outside the the United States exhibit no large systematic differences, the preliminary conclusion is that the large differences are

Comparison of atmospheric water vapour content with GNSS, Radiosonde, Microwave radiometer, and Lidar

NASA Astrophysics Data System (ADS)

Sohn, D.; Park, K.

2012-12-01

The increased amount of saturated water vapor due to the Earth's temperature rise frequently causes abnormal meteorological phenomena such as local severe rainfall in Korea. The National Institute of Meteorological Research of Korea Meteorological Administration (KMA) conducted observation experiments using a variety of water-vapor measuring equipments to improve the accuracy of weather forecasts and accurately measure the precipitable water vapor in the atmosphere. Equipments used were GNSS, water vapor radiometers (WVR), radiosonde, and LiDAR. For GNSS measurements we used two receivers that can collect not only GPS but also GLONASS signals: Trimble NetR5 and Septentrio PolaRx4. The two WVR makers are Raidometrics and RPG. For radiosonde observations, KMA launched Vaisala GPSondes every 6 hours during the experiment period. The LiDAR system was made locally by Hanbat University in Daejeon. Thus, we could obtain collocation experiment results from 6 different kinds of water vapor measurement and analyze the characteristics of each device.

How can we obtain quality controlled sounding data during the YMC campaign?

NASA Astrophysics Data System (ADS)

Yoneyama, K.; Bellenger, H.; Nurhayati, N.

2016-12-01

Years of the Maritime Continent or YMC is an international field campaign, which aims at enhancing our knowledge of weather-climate systems over the Maritime Continent and its relation to higher latitudes through observations and numerical modeling. It is expected to take place for the period of two years from July 2017. One of the key components of this campaign is a tight relationship with scientists all over the world and the local meteorological agencies. While several intensive observations are designed aiming at specific phenomena such as diurnal cycle of the rainfall, the Madden-Julian Oscillation, and monsoon, long-term measurement done by the local meteorological agencies as their routine basis is also a key to study background atmospheric condition as well as specific phenomena. In particular, radiosonde atmospheric sounding is still the most basic and important observation. While we can obtain data at the conventional heights in near real-time via GTS, original hi-resolution data (1-2 seconds during ascent) will also be available thanks to the great contribution from the local agencies. We must, however, be careful to use those data, since they are obtained under the different conditions with various different radiosonde-types. Even in one country, they adopt different systems due to various reasons. By considering above as well as the necessity of accurate data for analysis, we have started the preparation to produce quality-controlled data. As its first step, since we obtained different radiosonde data (Vaisala RS92, RS41, and Meisei RS-11G) during the pre-YMC campaign done by Japanese and Indonesian groups in November - December 2015, we have developed a correction scheme for them. We also evaluate their accuracy using GPS-derived water vapor. Currently, we are also collecting information for other sites with the help of BMKG for Indonesia (they use Meisei and Modem sensors), MetMalaysia for Malaysia (Changfeng), PAGASA for Philippines (Vaisala

The Influence of Radiosonde 'Age' on TRMM Field Campaign Soundings Humidity Correction

NASA Technical Reports Server (NTRS)

Roy, Biswadev; Halverson, Jeffrey B.; Wang, Jun-Hong

2002-01-01

Hundreds of Vaisala sondes with a RS80-H Humicap thin-film capacitor humidity sensor were launched during the Tropical Rainfall Measuring Mission (TRMM) field campaigns in Large Scale Biosphere-Atmosphere held in Brazil (LBA) and in Kwajalein experiment (KWAJEX) held in the Republic of Marshall Islands. Using Six humidity error correction algorithms by Wang et al., these sondes were corrected for significant dry bias in the RS80-H data. It is further shown that sonde surface temperature error must be corrected for a better representation of the relative humidity. This error becomes prominent due to sensor arm-heating in the first 50-s data.

GPS water vapor and its comparison with radiosonde and ERA-Interim data in Algeria

NASA Astrophysics Data System (ADS)

Namaoui, Houaria; Kahlouche, Salem; Belbachir, Ahmed Hafid; Van Malderen, Roeland; Brenot, Hugues; Pottiaux, Eric

2017-05-01

Remote sensing of atmospheric water vapor using global positioning system (GPS) data has become an effective tool in meteorology, weather forecasting and climate research. This paper presents the estimation of precipitable water (PW) from GPS observations and meteorological data in Algeria, over three stations located at Algiers, Bechar and Tamanrasset. The objective of this study is to analyze the sensitivity of the GPS PW estimates for the three sites to the weighted mean temperature ( T m), obtained separately from two types of T m- T s regression [one general, and one developed specifically for Algeria ( T s stands for surface temperature)], and calculated directly from ERA-Interim data. The results show that the differences in T m are of the order of 18 K, producing differences of 2.01 mm in the final evaluation of PW. A good agreement is found between GPS-PW and PW calculated from radiosondes, with a small mean difference with Vaisala radiosondes. A comparison between GPS and ERA-Interim shows a large difference (4 mm) in the highlands region. This difference is possibly due to the topography. These first results are encouraging, in particular for meteorological applications in this region, with good hope to extend our dataset analysis to a more complete, nationwide coverage over Algeria.

Evaluation of data from the Vaisala CT25K for Estimation of PM10 Concentration and Mixing Heights in an Urban Environment

NASA Astrophysics Data System (ADS)

Gunter, R. L.; Hosker, R. P.

2005-12-01

During the month of August, the Urban Dispersion Project was conducted in New York City. NOAA's Atmospheric and Turbulence Division (ATDD), Oak Ridge, TN operated a Vaisala CT25K Ceilometer for a two-week timeframe during the project. Typically, ceilometer measurements are used for cloud height determination. It has been found that during dry conditions, there is a good correlation between the ceilometer near- range backscatter and in situ PM10 concentration readings. In addition, it also has been determined that the ceilometer is a suitable instrument for determining the convective mixing height (MH). Aerosol concentrations are calculated and mixing heights are estimated using data from the ceilometer during dry conditions in Manhattan. Mixing heights are compared to radiosonde data taken during the project.

Water Vapor Measurements by Howard University Raman Lidar during the WAVES 2006 Campaign

NASA Technical Reports Server (NTRS)

Adam, M.; Demoz, B. B.; Whiteman, D. N.; Venable, D. D.; Joseph E.; Gambacorta, A.; Wei, J.; Shephard, M. W.; Miloshevich, L. M.; Barnet, C. D.;

The study of aerosol and ozone measurements in lower boundary layer with UAV helicopter platform

NASA Astrophysics Data System (ADS)

Lin, Po-hsiung; Chen, Wen-nai

2013-04-01

This study describes the aerosol and ozone measurement in the lower atmospheric boundary layer of highly polluted region at Kao-hsiung, Taiwan with a small unmanned aerial vehicle (UAV) helicopter platform. This UAV helicopter, modified from Gaui-X7 electronic-power model helicopter with autopilot AHRS (Altitude-Head-Reference System) kit, has fast climb speed up to 700 m height and keeps stable status for atmospheric measurements in five-minute fly leg. Several quick-replaced battery packages are ready on ground for field intensive observation. The payload rack under this UAV helicopter carries a micro-Aethalometer (black carbon concentration), ozone meter, temperature-humidity sensor, barometer and a time-lapse digital camera. The field measurement site closes to Linyuan Petrochemical Industrial Park, where is one of the heavy polluted regions in Taiwan. Balloon-borne Vaisala RS-92 radiosonde and CL31 Lidar Ceilometer are used to provide the background of the atmosphere at the same time. More data analysis measured by UAV helicopter and its potential application will be discussed.

The DACCIWA 2016 radiosonde campaign in southern West Africa

NASA Astrophysics Data System (ADS)

Fink, Andreas H.; Maranan, Marlon; Knippertz, Peter; Ngamini, Jean-Blaise; Francis, Sabastine

2017-04-01

Operational upper-air stations are very sparsely distributed over West Africa, resulting in the necessity to enhance radiosonde observations for the DACCIWA (Dynamics-Aerosol-Chemistry-Cloud Interactions in West Africa) experimental period during June-July 2016. Building on the AMMA (African Monsoon - Multidisciplinary Analyses) experience, existing infrastructures, as well as human networks, the upper air network was successfully augmented to a spatial density that is unprecedented for southern West Africa. Altogether, more than 750 experimental radiosondes were launched at seven stations in three countries along the Guinea Coast. From its outset, the DACCIWA radiosonde campaign had three pillars: (a) enhancing soundings at operational or quiescent AMMA radiosonde stations; (b) launching sondes at DACCIWA supersites and two additional DACCIWA field sites; and (c) collecting standard and - if possible - high-resolution data from other operational RS stations. In terms of (a), it was found during preparing recce visits to West Africa, that the AMMA-activated stations of Cotonou (Benin) and Abuja (Nigeria) were operational though almost "invisible" on the World Meteorological Organisation's Global Teleconnection System (GTS). These and other AMMA legacies facilitated the implementation of enhanced, four-times daily soundings at Abidjan (Ivory Coast), Cotonou and Parakou (both Benin). Two well-instrumented DACCIWA ground sites at Kumasi (Ghana) and Savé (Benin) performed 06 UTC soundings, being enhanced to four-times daily ascents during fifteen Intensive Observing Periods (IOPs). In addition, research staff and students from the Karlsruhe Institute of Technology (KIT) and African partners conducted up to five-times daily soundings at Lamto (Ivory Coast) and Accra (Ghana). Almost all of the experimental DACCIWA ascents were submitted to the GTS in real time and assimilated at least at three European numerical weather prediction centres that helped to improve their

Recommendations for processing atmospheric attenuated backscatter profiles from Vaisala CL31 ceilometers

NASA Astrophysics Data System (ADS)

Kotthaus, Simone; O'Connor, Ewan; Münkel, Christoph; Charlton-Perez, Cristina; Haeffelin, Martial; Gabey, Andrew M.; Grimmond, C. Sue B.

2016-08-01

Ceilometer lidars are used for cloud base height detection, to probe aerosol layers in the atmosphere (e.g. detection of elevated layers of Saharan dust or volcanic ash), and to examine boundary layer dynamics. Sensor optics and acquisition algorithms can strongly influence the observed attenuated backscatter profiles; therefore, physical interpretation of the profiles requires careful application of corrections. This study addresses the widely deployed Vaisala CL31 ceilometer. Attenuated backscatter profiles are studied to evaluate the impact of both the hardware generation and firmware version. In response to this work and discussion within the CL31/TOPROF user community (TOPROF, European COST Action aiming to harmonise ground-based remote sensing networks across Europe), Vaisala released new firmware (versions 1.72 and 2.03) for the CL31 sensors. These firmware versions are tested against previous versions, showing that several artificial features introduced by the data processing have been removed. Hence, it is recommended to use this recent firmware for analysing attenuated backscatter profiles. To allow for consistent processing of historic data, correction procedures have been developed that account for artefacts detected in data collected with older firmware. Furthermore, a procedure is proposed to determine and account for the instrument-related background signal from electronic and optical components. This is necessary for using attenuated backscatter observations from any CL31 ceilometer. Recommendations are made for the processing of attenuated backscatter observed with Vaisala CL31 sensors, including the estimation of noise which is not provided in the standard CL31 output. After taking these aspects into account, attenuated backscatter profiles from Vaisala CL31 ceilometers are considered capable of providing valuable information for a range of applications including atmospheric boundary layer studies, detection of elevated aerosol layers, and model

Sodar - Vaisala Triton Wind Profiler, AON8 - Raw Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON2 - Reviewed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON9 - Raw Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON1 - Raw Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON3 - Raw Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON8 - Reviewed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON5 - Processed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON5 - Reviewed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON7 - Reviewed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON2 - Processed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON8 - Processed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON1 - Processed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON6 - Processed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON7 - Raw Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON4 - Raw Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON9 - Processed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON4 - Processed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON2 - Raw Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON4 - Reviewed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON9 - Reviewed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON7 - Processed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON6 - Reviewed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON5 - Raw Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON6 - Raw Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON3 - Processed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Sodar - Vaisala Triton Wind Profiler, AON1 - Reviewed Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stoelinga, Mark

2018-01-26

This dataset contains measurements from eight different Vaisala Triton Wind Profiler instruments. The Triton Wind Profiler is a sodar wind profiler that measures wind speed, direction, and turbulence intensity at heights from 30 m to 200 m above ground every 10 minutes. The eight Tritons are located at various sites around the WFIP2 study area.

Comparison of Southern Hemisphere radiosonde and LIMS temperatures at 100 mb. [limb infrared monitor of stratosphere

NASA Technical Reports Server (NTRS)

Miles, T.; Grose, W. L.; Russell, J. M., III; Remsberg, E. E.

1987-01-01

Radiosonde (RS)and satellite-derived (Nimbus-7 LIMS) 100-mb temperatures over New Zealand at 12 GMT are compared for the 1978-79 summer. The colocated LIMS temperature information consists of synoptically mapped values (for 12 GMT), as well as the primary nighttime orbital retrievals valid at about 1030 GMT. The RS time series of temperature is dominated by temporal fluctuations associated mainly with the eastward passage of waves which have characteristic periods of 4-5 and 11-12 days and peak-to-peak amplitudes of 10-15 K. The LIMS temperatures and the corresponding temperature time series are also found to exhibit quite close agreement (in terms of temporal phase for the latter) with the RS data. However, the LIMS-mapped temperature fluctuations suffer from a noticeable attenuation in amplitude (approaching 50 percent for higher-frequency fluctuations), which will affect the accuracy of LIMS-derived estimates of dynamical quantities such as wind velocity and relative vorticity in the lower stratosphere.

The UW digital ozonesonde: Characteristics and flow rate calibration

NASA Technical Reports Server (NTRS)

Harder, J. W.; Hofmann, D. J.; Rosen, J. M.; Kjome, N. T.

1988-01-01

During the austral springs of 1986 and 1987, a series of balloon soundings were conducted to characterize the temporal and vertical development of Antarctic ozone depletion using the electrochemical concentration cell method (ECC). An important part of this study was to perform correlative studies between ozone and aerosol particles. In order to facilitate these simultaneous measurements, a digital ozonesonde system was developed to interface with aerosol counters. The ozone measurements will be described herein. The ozonesonde modification was accomplished by converting the current output of the sonde to a frequency and adding this digital signal to the serial data stream of a Vaisala Corporation RS-80 radiosonde under microprocessor control. A number of advantages over the standard ozonesonde system currently in use are noted.

A semiempirical error estimation technique for PWV derived from atmospheric radiosonde data

NASA Astrophysics Data System (ADS)

Castro-Almazán, Julio A.; Pérez-Jordán, Gabriel; Muñoz-Tuñón, Casiana

2016-09-01

A semiempirical method for estimating the error and optimum number of sampled levels in precipitable water vapour (PWV) determinations from atmospheric radiosoundings is proposed. Two terms have been considered: the uncertainties in the measurements and the sampling error. Also, the uncertainty has been separated in the variance and covariance components. The sampling and covariance components have been modelled from an empirical dataset of 205 high-vertical-resolution radiosounding profiles, equipped with Vaisala RS80 and RS92 sondes at four different locations: Güímar (GUI) in Tenerife, at sea level, and the astronomical observatory at Roque de los Muchachos (ORM, 2300 m a.s.l.) on La Palma (both on the Canary Islands, Spain), Lindenberg (LIN) in continental Germany, and Ny-Ålesund (NYA) in the Svalbard Islands, within the Arctic Circle. The balloons at the ORM were launched during intensive and unique site-testing runs carried out in 1990 and 1995, while the data for the other sites were obtained from radiosounding stations operating for a period of 1 year (2013-2014). The PWV values ranged between ˜ 0.9 and ˜ 41 mm. The method sub-samples the profile for error minimization. The result is the minimum error and the optimum number of levels. The results obtained in the four sites studied showed that the ORM is the driest of the four locations and the one with the fastest vertical decay of PWV. The exponential autocorrelation pressure lags ranged from 175 hPa (ORM) to 500 hPa (LIN). The results show a coherent behaviour with no biases as a function of the profile. The final error is roughly proportional to PWV whereas the optimum number of levels (N0) is the reverse. The value of N0 is less than 400 for 77 % of the profiles and the absolute errors are always < 0.6 mm. The median relative error is 2.0 ± 0.7 % and the 90th percentile P90 = 4.6 %. Therefore, whereas a radiosounding samples at least N0 uniform vertical levels, depending on the water

Reducing representativeness and sampling errors in radio occultation-radiosonde comparisons

NASA Astrophysics Data System (ADS)

Gilpin, Shay; Rieckh, Therese; Anthes, Richard

2018-05-01

Radio occultation (RO) and radiosonde (RS) comparisons provide a means of analyzing errors associated with both observational systems. Since RO and RS observations are not taken at the exact same time or location, temporal and spatial sampling errors resulting from atmospheric variability can be significant and inhibit error analysis of the observational systems. In addition, the vertical resolutions of RO and RS profiles vary and vertical representativeness errors may also affect the comparison. In RO-RS comparisons, RO observations are co-located with RS profiles within a fixed time window and distance, i.e. within 3-6 h and circles of radii ranging between 100 and 500 km. In this study, we first show that vertical filtering of RO and RS profiles to a common vertical resolution reduces representativeness errors. We then test two methods of reducing horizontal sampling errors during RO-RS comparisons: restricting co-location pairs to within ellipses oriented along the direction of wind flow rather than circles and applying a spatial-temporal sampling correction based on model data. Using data from 2011 to 2014, we compare RO and RS differences at four GCOS Reference Upper-Air Network (GRUAN) RS stations in different climatic locations, in which co-location pairs were constrained to a large circle ( ˜ 666 km radius), small circle ( ˜ 300 km radius), and ellipse parallel to the wind direction ( ˜ 666 km semi-major axis, ˜ 133 km semi-minor axis). We also apply a spatial-temporal sampling correction using European Centre for Medium-Range Weather Forecasts Interim Reanalysis (ERA-Interim) gridded data. Restricting co-locations to within the ellipse reduces root mean square (RMS) refractivity, temperature, and water vapor pressure differences relative to RMS differences within the large circle and produces differences that are comparable to or less than the RMS differences within circles of similar area. Applying the sampling correction shows the most significant

Soundings from SGP, June 2014 Sonde Comparison Study

DOE Data Explorer

Jensen, Michael

2015-03-06

In early June 2014, a radiosonde intercomparison trial was undertaken at the SGP Central Facility site with the goal of quantifying the relative performance of the RS92-SGP/MW31 and RS41-SG/MW41 radiosondes/systems. The June time period at SGP represents a springtime mid-latitude convective environment where the extensive remote sensing observations at the SGP site were used to further quantify the environment during the intercomparison. Over the course of five days (3 - 8 June) a total of 20 balloon launches were completed with efforts to sample the entire diurnal cycle and a variety of cloud conditions

UAS as a Support for Atmospheric Aerosols Research: Case Study

NASA Astrophysics Data System (ADS)

Chiliński, Michał T.; Markowicz, Krzysztof M.; Kubicki, Marek

2018-01-01

Small drones (multi-copters) have the potential to deliver valuable data for atmospheric research. They are especially useful for collecting vertical profiles of optical and microphysical properties of atmospheric aerosols. Miniaturization of sensors, such as aethalometers and particle counters, allows for collecting profiles of black carbon concentration, absorption coefficient, and particle size distribution. Vertical variability of single-scattering properties has a significant impact on radiative transfer and Earth's climate, but the base of global measurements is very limited. This results in high uncertainties of climate/radiation models. Vertical range of modern multi-copters is up to 2000 m, which is usually enough to study aerosols up to the top of planetary boundary layer on middle latitudes. In this study, we present the benefits coming from usage of small drones in atmospheric research. The experiment, described as a case study, was conducted at two stations (Swider and Warsaw) in Poland, from October 2014 to March 2015. For over 6 months, photoacoustic extinctiometers collected data at both stations. This enabled us to compare the stations and to establish ground reference of black carbon concentrations for vertical profiles collected by ceilometer and drone. At Swider station, we used Vaisala CL-31 ceilometer. It delivered vertical profiles of range corrected signal, which were analysed together with profiles acquired by micro-aethalometer AE-51 and Vaisala RS92-SGP radiosonde carried by a hexacopter drone. Near to the surface, black carbon gradient of ≈ 400 (\\upmu g/m^3 )/100 m was detected, which was below the ceilometer minimal altitude of detection. This confirmed the usefulness of drones and potential of their support for remote sensing techniques.

Measurements of Humidity in the Atmosphere and Validation Experiments (MOHAVE)-2009: overview of campaign operations and results

NASA Astrophysics Data System (ADS)

Leblanc, T.; Walsh, T. D.; McDermid, I. S.; Toon, G. C.; Blavier, J.-F.; Haines, B.; Read, W. G.; Herman, B.; Fetzer, E.; Sander, S.; Pongetti, T.; Whiteman, D. N.; McGee, T. G.; Twigg, L.; Sumnicht, G.; Venable, D.; Calhoun, M.; Dirisu, A.; Hurst, D.; Jordan, A.; Hall, E.; Miloshevich, L.; Vömel, H.; Straub, C.; Kampfer, N.; Nedoluha, G. E.; Gomez, R. M.; Holub, K.; Gutman, S.; Braun, J.; Vanhove, T.; Stiller, G.; Hauchecorne, A.

2011-05-01

The Measurements of Humidity in the Atmosphere and Validation Experiment (MOHAVE) 2009 campaign took place on 11-27 October 2009 at the JPL Table Mountain Facility in California (TMF). The main objectives of the campaign were to (1) validate the water vapor measurements of several instruments, including, three Raman lidars, two microwave radiometers, two Fourier-Transform spectrometers, and two GPS receivers (column water), (2) cover water vapor measurements from the ground to the mesopause without gaps, and (3) study upper tropospheric humidity variability at timescales varying from a few minutes to several days. A total of 58 radiosondes and 20 Frost-Point hygrometer sondes were launched. Two types of radiosondes were used during the campaign. Non negligible differences in the readings between the two radiosonde types used (Vaisala RS92 and InterMet iMet-1) made a small, but measurable impact on the derivation of water vapor mixing ratio by the Frost-Point hygrometers. As observed in previous campaigns, the RS92 humidity measurements remained within 5 % of the Frost-point in the lower and mid-troposphere, but were too dry in the upper troposphere. Over 270 h of water vapor measurements from three Raman lidars (JPL and GSFC) were compared to RS92, CFH, and NOAA-FPH. The JPL lidar profiles reached 20 km when integrated all night, and 15 km when integrated for 1 h. Excellent agreement between this lidar and the frost-point hygrometers was found throughout the measurement range, with only a 3 % (0.3 ppmv) mean wet bias for the lidar in the upper troposphere and lower stratosphere (UTLS). The other two lidars provided satisfactory results in the lower and mid-troposphere (2-5 % wet bias over the range 3-10 km), but suffered from contamination by fluorescence (wet bias ranging from 5 to 50 % between 10 km and 15 km), preventing their use as an independent measurement in the UTLS. The comparison between all available stratospheric sounders allowed to identify only the

Measurements of Humidity in the Atmosphere and Validation Experiments (MOHAVE)-2009: overview of campaign operations and results

NASA Astrophysics Data System (ADS)

Leblanc, T.; Walsh, T. D.; McDermid, I. S.; Toon, G. C.; Blavier, J.-F.; Haines, B.; Read, W. G.; Herman, B.; Fetzer, E.; Sander, S.; Pongetti, T.; Whiteman, D. N.; McGee, T. G.; Twigg, L.; Sumnicht, G.; Venable, D.; Calhoun, M.; Dirisu, A.; Hurst, D.; Jordan, A.; Hall, E.; Miloshevich, L.; Vömel, H.; Straub, C.; Kampfer, N.; Nedoluha, G. E.; Gomez, R. M.; Holub, K.; Gutman, S.; Braun, J.; Vanhove, T.; Stiller, G.; Hauchecorne, A.

2011-12-01

The Measurements of Humidity in the Atmosphere and Validation Experiment (MOHAVE) 2009 campaign took place on 11-27 October 2009 at the JPL Table Mountain Facility in California (TMF). The main objectives of the campaign were to (1) validate the water vapor measurements of several instruments, including, three Raman lidars, two microwave radiometers, two Fourier-Transform spectrometers, and two GPS receivers (column water), (2) cover water vapor measurements from the ground to the mesopause without gaps, and (3) study upper tropospheric humidity variability at timescales varying from a few minutes to several days. A total of 58 radiosondes and 20 Frost-Point hygrometer sondes were launched. Two types of radiosondes were used during the campaign. Non negligible differences in the readings between the two radiosonde types used (Vaisala RS92 and InterMet iMet-1) made a small, but measurable impact on the derivation of water vapor mixing ratio by the Frost-Point hygrometers. As observed in previous campaigns, the RS92 humidity measurements remained within 5% of the Frost-point in the lower and mid-troposphere, but were too dry in the upper troposphere. Over 270 h of water vapor measurements from three Raman lidars (JPL and GSFC) were compared to RS92, CFH, and NOAA-FPH. The JPL lidar profiles reached 20 km when integrated all night, and 15 km when integrated for 1 h. Excellent agreement between this lidar and the frost-point hygrometers was found throughout the measurement range, with only a 3% (0.3 ppmv) mean wet bias for the lidar in the upper troposphere and lower stratosphere (UTLS). The other two lidars provided satisfactory results in the lower and mid-troposphere (2-5% wet bias over the range 3-10 km), but suffered from contamination by fluorescence (wet bias ranging from 5 to 50% between 10 km and 15 km), preventing their use as an independent measurement in the UTLS. The comparison between all available stratospheric sounders allowed to identify only the

Correction Technique for Raman Water Vapor Lidar Signal-Dependent Bias and Suitability for Water Wapor Trend Monitoring in the Upper Troposphere

NASA Technical Reports Server (NTRS)

Whiteman, D. N.; Cadirola, M.; Venable, D.; Calhoun, M.; Miloshevich, L; Vermeesch, K.; Twigg, L.; Dirisu, A.; Hurst, D.; Hall, E.;

A comparative study of measurements from radiosondes, rocketsondes, and satellites

NASA Technical Reports Server (NTRS)

Nestler, M. S.

1983-01-01

Direct comparisons of operational products derived from measurements of radiance by satellites to measurements from conventional in situ sensors are important for the evaluation of satellite systems. However, errors in the in situ measurements themselves complicate such comparisons. Atmospheric temporal and spatial variability are also influential. These issues are investigated by means of a special field program composed of flights of dual radiosondes and multiple radiosondes launched near the time of NOAA-6 overpasses. Satellite derived mean layer temperatures, geopotential heights, and winds are compared with the same quantities determined from the in situ sensors. Of particular interest is the impact of in situ errors on these comparisons. It is shown that the radiosonde provides a precise pressure height relationship and therefore precise data for synoptic type use. Radar tracking of the radiosondes reveals, however, an imprecise pressure measurement which causes large differences between the actual altitude of the radiosonde and the altitude at which it is calculated to be. Radiosondes should be radar tracked and pressures calculated if the data are to be used for purposes other than synoptic use. Evaluation of rocketsonde data reveals a temperature precision of 1 to 2 K below about 55 km. Above 55 km, the precision decreases rapidly; rms differences of up to 11 K are obtained.

Measurements of Humidity in the Atmosphere and Validation Experiments (Mohave, Mohave II): Results Overview

NASA Technical Reports Server (NTRS)

Leblanc, Thierry; McDermid, Iain S.; McGee, Thomas G.; Twigg, Laurence W.; Sumnicht, Grant K.; Whiteman, David N.; Rush, Kurt D.; Cadirola, Martin P.; Venable, Demetrius D.; Connell, R.;

Comparing upper tropospheric humidity data from microwave satellite instruments and tropical radiosondes

NASA Astrophysics Data System (ADS)

Moradi, Isaac; Buehler, Stefan A.; John, Viju O.; Eliasson, Salomon

2010-12-01

Atmospheric humidity plays an important role in the Earth's climate. Microwave satellite data provide valuable humidity observations in the upper troposphere with global coverage. In this study, we compare upper tropospheric humidity (UTH) retrieved from the Advanced Microwave Sounding Unit and the Microwave Humidity Sounder against radiosonde data measured at four of the central facilities of the Atmospheric Radiation Measurement program. The Atmospheric Radiative Transfer Simulator (ARTS) was used to simulate satellite brightness temperatures from the radiosonde profiles. Strong ice clouds were filtered out, as their influence on microwave measurements leads to incorrect UTH values. Day and night radiosonde profiles were analyzed separately to take into account the radiosonde radiation bias. The comparison between radiosonde and satellite is most meaningful for data in cloud-free, nighttime conditions and with a time difference of less than 2 hr. We found good agreement between the two data sets. The satellite data were slightly moister than the radiosonde data, with a mean difference of 1%-2.3% relative humidity (RH), depending on the radiosonde site. Monthly gridded data were also compared and showed a slightly larger mean difference of up to 3.3% RH, which can be explained by sampling issues.

Radiosonde Atmospheric Temperature Products for Assessing Climate (RATPAC): Towards a New Adjusted Radiosonde Dataset

NASA Astrophysics Data System (ADS)

Free, M. P.; Angell, J. K.; Durre, I.; Klein, S.; Lanzante, J.; Lawrimore, J.; Peterson, T.; Seidel, D.

2002-05-01

The objective of NOAA's RATPAC project is to develop climate-quality global, hemispheric and zonal upper-air temperature time series from the NCDC radiosonde database. Lanzante, Klein and Seidel (LKS) have produced an 87-station adjusted radiosonde dataset using a multifactor expert decision approach. Our goal is to extend this dataset spatially and temporally and to provide a method to update it routinely at NCDC. Since the LKS adjustment method is too labor-intensive for these purposes, we are investigating a first-difference method (Peterson et al., 1998) and an automated version of the LKS method. The first difference method (FD) can be used to combine large numbers of time series into spatial means, but also introduces a random error in the resulting large-scale averages. If the portions of the time series with suspect continuity are withheld from the calculations, it has the potential to reconstruct the real variability without the effects of the discontinuities. However, tests of FD on unadjusted radiosonde data and on reanalysis temperature data suggest that it must be used with caution when the number of stations is low and the number of data gaps is high. Because of these problems with the first difference approach, we are also considering an automated version of the LKS adjustment method using statistical change points, day-night temperature difference series, relationships between changes in adjacent atmospheric levels, and station histories to identify inhomogeneities in the temperature data.

Characterization of Upper Troposphere Water Vapor Measurements during AFWEX using LASE

NASA Technical Reports Server (NTRS)

Ferrare, R. A.; Browell, E. V.; Ismail, S.; Kooi, S.; Brasseur, L. H.; Brackett, V. G.; Clayton, M.; Barrick, J.; Linne, H.; Lammert, A.

2002-01-01

Water vapor profiles from NASA's Lidar Atmospheric Sensing Experiment (LASE) system acquired during the ARM/FIRE Water Vapor Experiment (AFWEX) are used to characterize upper troposphere water vapor (UTWV) measured by ground-based Raman lidars, radiosondes, and in situ aircraft sensors. Initial comparisons showed the average Vaisala radiosonde measurements to be 5-15% drier than the average LASE, Raman lidar, and DC-8 in situ diode laser hygrometer measurements. We show that corrections to the Raman lidar and Vaisala measurements significantly reduce these differences. Precipitable water vapor (PWV) derived from the LASE water vapor profiles agrees within 3% on average with PWV derived from the ARM ground-based microwave radiometer (MWR). The agreement among the LASE, Raman lidar, and MWR measurements demonstrates how the LASE measurements can be used to characterize both profile and column water vapor measurements and that ARM Raman lidar, when calibrated using the MWR PWV, can provide accurate UTWV measurements.

Characterization of upper troposphere water vapor measurements during AFWEX using LASE.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ferrare, R. A.; Browell, E. V.; Ismail, I.

2002-07-15

Water vapor profiles from NASA's Lidar Atmospheric Sensing Experiment (LASE) system acquired during the ARM/FIRE Water Vapor Experiment (AFWEX) are used to characterize upper troposphere (UT) water vapor measured by ground-based Raman lidars, radiosondes, and in situ aircraft sensors. Initial comparisons showed the average Vaisala radiosonde measurements to be 5-15% drier than the average LASE, Raman lidar, and DC-8 in situ diode laser hygrometer measurements. They show that corrections to the Raman lidar and Vaisala measurements significantly reduce these differences. Precipitable water vapor (PWV) derived from the LASE water vapor profiles agrees within 3% on average with PWV derived frommore » the ARM ground-based microwave radiometer (MWR). The agreement among the LASE, Raman lidar, and MWR measurements demonstrates how the LASE measurements can be used to characterize both profile and column water vapor measurements and that ARM Raman lidar, when calibrated using the MWR PWV, can provide accurate UT water vapor measurements.« less

Evidence of atmospheric gravity wave perturbations of the Brunt-Vaisala frequency in the atmosphere

NASA Technical Reports Server (NTRS)

Good, R. E.; Beland, R. W.; Brown, J. H.; Dewan, E. M.

1986-01-01

A series of high altitude, medium resolution, measurements of temperature, pressure and turbulence have been performed by the Air Force Geophysics Laboratory. These measurements were conducted using the VIZ Manufacturing Co. microsondes with attached micro-thermal probes measuring the temperature structure coefficient. A typical atmospheric temperature measurement is given. Several small temperature inversions are evident in the troposphere. The stratosphere is marked with numerous fluctuations in the temperature profile. Microsondes provide temperature and pressure measurements every 4 seconds up to a maximum altitude of 30 km (MSL). Since the average ascent rate is 5 m/s, the altitude interval between the measurement reports is 20 m. The potential temperature is calculated from the temperature and pressure. Spectral analysis of atmospheric Brunt-Vaisala frequencies reveal spectra similiar to the velocity spectra of Dewan et al. (1984), Daniels (1982), and Endlich and Singleton (1969). The Brunt-Vaisala spectra indicate the existence of separate, distinguishable wave modes.

An interpretation of radiosonde errors in the atmospheric boundary layer

Treesearch

Bernadette H. Connell; David R. Miller

1995-01-01

The authors review sources of error in radiosonde measurements in the atmospheric boundary layer and analyze errors of two radiosonde models manufactured by Atmospheric Instrumentation Research, Inc. The authors focus on temperature and humidity lag errors and wind errors. Errors in measurement of azimuth and elevation angles and pressure over short time intervals and...

Planetary boundary layer height from CALIOP compared to radiosonde over China

NASA Astrophysics Data System (ADS)

Zhang, Wanchun; Guo, Jianping; Miao, Yucong; Liu, Huan; Zhang, Yong; Li, Zhengqiang; Zhai, Panmao

2016-08-01

Accurate estimation of planetary boundary layer height (PBLH) is key to air quality prediction, weather forecast, and assessment of regional climate change. The PBLH retrieval from the Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP) is expected to complement ground-based measurements due to the broad spatial coverage of satellites. In this study, CALIOP PBLHs are derived from combination of Haar wavelet and maximum variance techniques, and are further validated against PBLHs estimated from ground-based lidar at Beijing and Jinhua. Correlation coefficients between PBLHs from ground- and satellite-based lidars are 0.59 at Beijing and 0.65 at Jinhua. Also, the PBLH climatology from CALIOP and radiosonde are compiled over China during the period from 2011 to 2014. Maximum CALIOP-derived PBLH can be seen in summer as compared to lower values in other seasons. Three matchup scenarios are proposed according to the position of each radiosonde site relative to its closest CALIPSO ground tracks. For each scenario, intercomparisons were performed between CALIOP- and radiosonde-derived PBLHs, and scenario 2 is found to be better than other scenarios using difference as the criteria. In early summer afternoon over 70 % of the total radiosonde sites have PBLH values ranging from 1.6 to 2.0 km. Overall, CALIOP-derived PBLHs are well consistent with radiosonde-derived PBLHs. To our knowledge, this study is the first intercomparison of PBLH on a large scale using the radiosonde network of China, shedding important light on the data quality of initial CALIOP-derived PBLH results.

Tropospheric and Lower Stratospheric Temperature Anomalies Based on Global Radiosonde Network Data (1958 - 2005)

DOE Data Explorer

Sterin, Alexander M. [Russian Research Institute for Hydrometeorological Information--World Data Center

2007-01-01

The observed radiosonde data from the Comprehensive Aerological Reference Data Set (CARDS) (Eskridge et al. 1995) were taken as the primary input for obtaining the series. These data were for the global radiosonde observational network through 2001. Since 2002, the AEROSTAB data (uper-air observations obtained through communication channels), collected at RIHMI-WDC in Obninsk, have been used. Both of these data sources were for the global radiosonde observational network. The CARDS data set is known as the most complete collection of radiosonde data.

Application of radiosonde data to VERITAS simulations

NASA Astrophysics Data System (ADS)

Daniel, M. K.

The atmosphere is a vital component of the detector in an atmospheric Cherenkov telescope. In order to understand observations from these instruments and reduce systematic uncertainties and biases in their data it is important to correctly model the atmosphere in simulations of the extensive air showers they detect. The Very High Energy Telescope Array (VERITAS) is a system of 4 such telescopes located at the Whipple Observatory in Southern Arizona. Daily radiosonde measurements from the nearby Tucson airport allow an accurate model of the atmosphere for the VERITAS experiment to be constructed. Comparison of the radiosonde data to existing atmospheric models is performed and the expected effects on the systematic uncertainties are summarised here.

Return glider radiosonde to measure temperature, humidity and radiation profiles through the atmosphere

NASA Astrophysics Data System (ADS)

Kraeuchi, Andreas; Philipona, Rolf

2015-04-01

Very promising radiation profile measurements through the atmosphere were made in 2011 with a balloon borne short- and longwave net radiometer. New and improved radiation sensors from Kipp&Zonen are now used in a glider aircraft together with a standard Swiss radiosonde from Meteolabor AG. This new return glider radiosonde (RG-R), is lifted up with double balloon technique to prevent pendulum motion and to keep the radiation instruments as horizontal as possible during the ascent measuring phase. The RG-R is equipped with a mechanism that allows to release the radiosonde at a preset altitude, and an autopilot allowing to fly the radiosonde back to the launch site and to land it savely with a parachute at a preset location. The return glider radiosonde technique as well as new measurement possibilities will be shown. First measurements show temperature, humidity and radiation profiles through the atmosphere up to 30 hPa (24 km) during different atmospheric conditions. Radiation profiles during different daytimes show possibilities with respect to temporal resolution of vertical radiation profiles trough the atmosphere.

A comparison of the Stratospheric Aerosol and Gas Experiment II tropospheric water vapor to radiosonde measurements

NASA Technical Reports Server (NTRS)

Larsen, J. C.; Chiou, E. W.; Chu, W. P.; Mccormick, M. P.; Mcmaster, L. R.; Oltmans, S.; Rind, D.

1993-01-01

Results are presented of a comparison beteen observations of the upper-tropospheric water vapor data obtained from the Stratospheric Aerosol and Gas Experiment II (SAGE II) instrument and radiosonde observations for 1987 and radiosonde-based climatologies. Colocated SAGE II-radiosonde measurement pairs are compared individually and in a zonal mean sense. A straight comparison of monthly zonal means between SAGE II and radiosondes for 1987 and Global Atmospheric Statistics (1963-1973) indicates that the clear-sky SAGE II climatology is approximately half the level of clear/cloudy sky of both radiosonde climatologies. Annual zonal means calculated from the set of profile pairs again showed SAGE II to be significantly drier in many altitude bands.

Radiation profiles measured through clouds using a return glider radiosonde

NASA Astrophysics Data System (ADS)

Kräuchi, Andreas; Philipona, Rolf; Kivi, Rigel

2016-04-01

With new and improved radiation sensors in a small glider aircraft vertical flights through clouds have been conducted. This new Return Glider Radiosonde (RG-R) is lifted up with double balloon technique to keep the radiation instruments as horizontal as possible during ascent. The RG-R is equipped with a routine radiosonde to transmit the data to a ground station and an autopilot to fly the glider radiosonde back to the launch site, where it lands autonomous with a parachute. The RG-R was successfully tested and deployed for tropospheric and stratospheric radiation measurements up to 30 hPa (24 km altitude) at the GRUAN sites Payerne (Switzerland) and Sodankylä (Finland). Radiation profiles and the radiation budget through the atmosphere during different daytimes and under cloud-free and cloudy situations will be shown in relation to temperature and humidity at the surface and in the atmosphere. The RG-R flight characteristics and new measurement possibilities will also be discussed.

Differences between radiosonde and dropsonde temperature profiles over the Arctic Ocean

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skony, S.M.; Kahl, J.D.W.; Zaitseva, N.A.

1994-10-01

The boundary layer structure measured by 402 pairs of approximately collocated radiosonde and dropsonde temperature profiles over the Arctic Ocean during the period 1957-1961 is examined. The radiosonde profiles were obtained at the Russian drifting ice camps `North Pole 7` and `North Pole 8,` and the dropsonde profiles were measured during the United States Air Force `Ptarmigan` series of weather reconnaissance flights. The boundary layer structure is characterized by the features of the low-level tropospheric temperature inversion. The results indicate that the dropsonde soundings, although containing relatively few measurement levels, contain sufficient vertical resolution to characterize the temperature inversion. Systematicmore » differences were noted in wintertime inversion features and near-surface temperatures as measured by dropsondes and radiosondes. These differences are attributed to contrasting temperature lag errors accompanying ascending and descending sensors.« less

MM-Wave Radiometric Measurements of Low Amounts of Precipitable Water Vapor

NASA Technical Reports Server (NTRS)

Racette, P.; Westwater, Ed; Han, Yong; Manning, Will; Jones, David; Gasiewski, Al

2000-01-01

An experiment was conducted during March, 1999 to study ways in which to improve techniques for measuring low amounts of total-column precipitable water vapor (PWV). The experiment was conducted at the DOE's ARM program's North Slope of Alaska/Adjacent Arctic Ocean Cloud and Radiation Testbed site (DoE ARM NSA/AAO CaRT) located just outside Barrow, Alaska. NASA and NOAA deployed a suite of radiometers covering 25 channels in the frequency range of 20 GHz up to 340 GHz including 8 channels around the 183 GHz water vapor absorption line. In addition to the usual CaRT site instrumentation the NOAA Depolarization and Backscatter Unattended Lidar (DABUL), the SUNY Rotating Shadowband Spectroradiometer (RSS) and other surface based meteorological instrumentation were deployed during the intensive observation period. Vaisala RS80 radiosondes were launched daily as well as nearby National Weather Service VIZ sondes. Atmospheric conditions ranged from clear calm skies to blowing snow and heavy multi-layer cloud coverage. Measurements made by the radiosondes indicate the PWV varied from approx. 1 to approx. 5 mm during the experiment. The near-surface temperature varied between about -40 C to - 15 C. In this presentation, an overview of the experiment with examples of data collected will be presented. Application of the data for assessing the potential and limitations of millimeter-wave radiometry for retrieving very low amounts of PWV will be discussed.

Radiosonde pressure sensor performance - Evaluation using tracking radars

NASA Technical Reports Server (NTRS)

Parsons, C. L.; Norcross, G. A.; Brooks, R. L.

1984-01-01

The standard balloon-borne radiosonde employed for synoptic meteorology provides vertical profiles of temperature, pressure, and humidity as a function of elapsed time. These parameters are used in the hypsometric equation to calculate the geopotential altitude at each sampling point during the balloon's flight. It is important that the vertical location information be accurate. The present investigation was conducted with the objective to evaluate the altitude determination accuracy of the standard radiosonde throughout the entire balloon profile. The tests included two other commercially available pressure sensors to see if they could provide improved accuracy in the stratosphere. The pressure-measuring performance of standard baroswitches, premium baroswitches, and hypsometers in balloon-borne sondes was correlated with tracking radars. It was found that the standard and premium baroswitches perform well up to about 25 km altitude, while hypsometers provide more reliable data above 25 km.

Return glider radiosonde for in situ upper-air research measurements

NASA Astrophysics Data System (ADS)

Kräuchi, Andreas; Philipona, Rolf

2016-06-01

Upper-air balloon soundings for weather predictions have been made since the beginning of the 20th century. New radiosonde instruments for in situ humidity-, radiation- and gas-profile measurements in the troposphere and the lower stratosphere, were introduced in recent years for atmospheric research and climate monitoring, but such instruments are often expensive and it is desired they be reused on multiple flights. Recovering instruments that freely descend with parachutes is time consuming, sometimes difficult and even dangerous. Here, we introduce the return glider radiosonde (RGR), which enables flying and retrieving valuable in situ upper-air instruments. The RGR is lifted with weather balloons similar to traditional radiosondes to a preset altitude, at which time a release mechanism cuts the tether string, and a built-in autopilot flies the glider autonomously back to the launch site or a desired preprogrammed location. Once the RGR reaches the landing coordinates it circles down and releases a parachute 100 m above ground for landing. The motivation for this project was to measure radiation profiles throughout the atmosphere with the same instrument multiple times and with a rapid turn-around time. The paper describes technical aspects of the return glider radiosonde and the built-in radiation instruments and shows test flights up to 24 km altitude that are analyzed in terms of flight performance and maximal distances covered. Several successive flights measuring radiation profiles demonstrate the reliability and the operational readiness of the RGR, allowing new ways for atmospheric in situ research and monitoring with payloads up to several kg depending on the specific size of the glider.

Analyses of Inhomogeneities in Radiosonde Temperature and Humidity Time Series.

NASA Astrophysics Data System (ADS)

Zhai, Panmao; Eskridge, Robert E.

1996-04-01

Twice daily radiosonde data from selected stations in the United States (period 1948 to 1990) and China (period 1958 to 1990) were sorted into time series. These stations have one sounding taken in darkness and the other in sunlight. The analysis shows that the 0000 and 1200 UTC time series are highly correlated. Therefore, the Easterling and Peterson technique was tested on the 0000 and 1200 time series to detect inhomogeneities and to estimate the size of the biases. Discontinuities were detected using the difference series created from the 0000 and 1200 UTC time series. To establish that the detected bias was significant, a t test was performed to confirm that the change occurs in the daytime series but not in the nighttime series.Both U.S. and Chinese radiosonde temperature and humidity data include inhomogeneities caused by changes in radiosonde sensors and observation times. The U.S. humidity data have inhomogeneities that were caused by instrument changes and the censoring of data. The practice of reporting relative humidity as 19% when it is lower than 20% or the temperature is below 40°C is called censoring. This combination of procedural and instrument changes makes the detection of biases and adjustment of the data very difficult. In the Chinese temperatures, them are inhomogeneities related to a change in the radiation correction procedure.Test results demonstrate that a modified Easterling and Peterson method is suitable for use in detecting and adjusting time series radiosonde data.Accurate stations histories are very desirable. Stations histories can confirm that detected inhomogeneities are related to instrument or procedural changes. Adjustments can then he made to the data with some confidence.

Indices of climate change in the Atlantic coast derived from radiosondes

NASA Astrophysics Data System (ADS)

Añel, J. A.; Gimeno, L.; Nieto, R.; Tesouro, M.; de La Torre, L.; Ribera, P.; García, R.; Hernández, E.

2003-04-01

In this poster we present the use of National Climatic Data Center Upper Air Digital Files (CARDS) to look for indications of climatic change over the principal area affected by the North Atlantic Oscillation. To do that we use several parameters calculated using radiosonde data. In this analysis, we take into account radiosonde stations from 28 North to 64 North, with data for the period from 1973 to 1998. Trends, oscillations and the relationship with the Northern Annular Mode and ENSO (El Niño-Southern Oscillation) were also studied.

An intercomparison of long-term planetary boundary layer heights retrieved from CALIPSO, ground-based lidar, and radiosonde measurements over Hong Kong

NASA Astrophysics Data System (ADS)

Su, Tianning; Li, Jing; Li, Chengcai; Xiang, Pengzhan; Lau, Alexis Kai-Hon; Guo, Jianping; Yang, Dongwei; Miao, Yucong

2017-04-01

The planetary boundary layer height (PBLH) is a very important parameter in the atmosphere, because it determines the range where the most effective dispersion processes take place, and serves as a constraint on the vertical transport of heat, moisture, and pollutants. As the only space-borne lidar, Cloud-Aerosol Lidar with Orthogonal Polarization onboard Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations (CALIPSO) measures the vertical distribution of aerosol signals and thus offers the potential to retrieve large-scale PBLH climatology. In this study, we explore different techniques for retrieving PBLH from CALIPSO measurements and validate the results against those obtained from ground-based micropulse lidar (MPL) and radiosonde (RS) data over Hong Kong, where long-term MPL and RS measurements are available. Two methods, namely maximum standard deviation (MSD) and wavelet covariance transform (WCT), are used to retrieve PBLH from CALIPSO. Results show that the RS- and MPL-derived PBLHs share similar interannual variation and seasonality and can complement each other. Both MSD and WCT perform reasonably well compared with MPL/RS products, especially under sufficient aerosol loading. Uncertainties increase when aerosol loading is low and the CALIPSO signal consequently becomes noisier. Overall, CALIPSO captures the general PBLH seasonal variability over Hong Kong, despite a high bias in spring and a low bias in summer. The spring high bias is likely associated with elevated aerosol layers due to transport, while the summer low bias can be attributed to higher noise level associated with weaker aerosol signal.

Repurposing Radiosonde Sensors for UAV Integration

NASA Astrophysics Data System (ADS)

Clowney, F. A.

2015-12-01

Radiosondes provide accurate, high-resolution meteorological data for a variety of purposes but are inefficient for studying the atmospheric boundary layer. Tethered balloons can provide greater temporal resolution but are difficult to acquire, hard to manage and limited in vertical resolution. UAVs appear to offer a more cost-effective method for gathering low-level meteorological data in situ, with a strong possibility of adding atmospheric chemistry. This potential is enhanced by the availability of new generations of small sensors along with dramatic advances in low-cost UAVs, especially rotary-wing. InterMet is using its experience in radiosonde design and manufacturing to develop sensor packages for fixed and rotary-wing UAVs, with the goal of delivering high-quality data at low cost. The challenge is to adapt affordable, high-accuracy sensors to the different UAV flight modes. Equally important is learning from the research community what is required for this data to have useful scientific value. Specific topics to be covered include data sampling and output rates, sensor response times, calibration, sensor placement, data storage and transfer, power consumption, integration with flight management systems and wind calculations. Beta test results for the iMet-XQ and iMet-XF sensor packages will be presented if available.

Indices of climate change in the Artic zone derived from radiosondes

NASA Astrophysics Data System (ADS)

Añel, J. A.; Gimeno, L.; de La Torre, L.; Nieto, R.; Tesouro, M.; Ribera, P.; García, R.; Hernández, E.

2003-04-01

The use of indices has been traditionally one of the main tools to identify climatic change. Here we present a study of the interannual variability of parameters derived from radiosonde data to study climate change in the artic zone. Trends, oscillations and the relationship with the principal climate variability mode for this region ( Northern Annular Mode) have been studied. We calculate the indices from the Upper Air Digital Files of the National Climatic Data Center (CARDS). We chose for our work the radiosonde data of stations over the studied region, with a temporal coverage of 27 years (1973-1998).

Indicators of climate change for the African continent derived from radiosondes

NASA Astrophysics Data System (ADS)

Añel, J. A.; Gimeno, L.; Tesouro, M.; de La Torre, L.; Nieto, R.; Ribera, P.; García, R.; Hernández, E.

2003-04-01

Here we study the interannual variability of different parameters calculated from radiosonde data in the African continent. Data used in the analysis were a subset of the National Climatic Data Center Upper Air Digital Files of the National Oceanic and Atmospheric Administration (USA) (CARDS). This work show the climatic trends in the studied region during the period and from 1973 to 1998). Results show that radiosonde stations were useful for this analysis in the African continent. Main oscillations and the relationship with the Northern Annular Mode and El Niño-Southern Oscillation were also studied.

Qualitative Comparison of IGRA and ESRL Radiosonde Archived Databases

NASA Technical Reports Server (NTRS)

Walker, John R.

2014-01-01

Multiple databases of atmospheric profile information are freely available to individuals and groups such as the Natural Environments group. Two of the primary database archives provided by NOAA that are most frequently used are those from the Earth Science Research Laboratory (ESRL) and the Integrated Global Radiosonde Archive (IGRA). Inquiries have been made as to why one database is used as opposed to the other, yet to the best of knowledge, no formal comparison has been performed. The goal of this study is to provide a qualitative comparison of the ESRL and IGRA radiosonde databases. For part of this analyses, 14 upper air observation sites were selected. These sites all have the common attribute of having been used or are planned for use in the development of Range Reference Atmospheres (RRAs) in support of NASA's and DOD's current and future goals.

Evaluation of radiosonde, MODIS-NIR-Clear, and AERONET precipitable water vapor using IGS ground-based GPS measurements over China

NASA Astrophysics Data System (ADS)

Gui, Ke; Che, Huizheng; Chen, Quanliang; Zeng, Zhaoliang; Liu, Haizhi; Wang, Yaqiang; Zheng, Yu; Sun, Tianze; Liao, Tingting; Wang, Hong; Zhang, Xiaoye

2017-11-01

Water vapor is one of the major greenhouse gases in the atmosphere and also the key parameter affecting the hydrological cycle, aerosol properties, aerosol-cloud interactions, the energy budget, and the climate. This study analyzed the temporal and spatial distribution of precipitable water vapor (PWV) in China using MODerate resolution Imaging Spectroradiometer near-infrared (MODIS-NIR)-Clear PWV products from 2011 to 2013. We then compared the four PWV products (Global Positioning System PWV (GPS-PWV), radiosonde PWV (RS-PWV), MODIS-NIR-Clear PWV, and Aerosol Robotic Network sunphotometer PWV (AERONET-PWV)) at six typical sites in China from 2011 to 2013. The analysis of the temporal and spatial distribution showed that the PWV distribution in China has clear geographical differences, and its basic distribution characteristics gradually change from the coast in the southeast to inland in the northwest. Affected by the East Asian monsoon, the PWV over China showed clear seasonal distribution features, with highest values in the summer, followed by autumn and spring, and the lowest values in winter. Intercomparison results showed that GPS-PWV and RS-PWV had a slightly higher correlation (R2 = 0.975) at 0000 UTC than that at 1200 UTC (R2 = 0.967). The mean values of Bias, SD, and RMSE between GPS-PWV and RS-PWV (GPS-RS) were - 0.03 mm, 2.36 mm, and 2.60 mm at 0000 UTC, and - 0.23 mm, 2.76 mm, and 2.95 mm at 1200 UTC, respectively. This showed that GPS-PWV was slightly lower than RS-PWV, and this difference was more obvious during the nighttime. The MODIS-NIR-Clear PWV product showed a similar correlation coefficient (R2 = 0.88) with GPS-PWV compared with RS-PWV. In addition, MODIS-NIR-Clear PWV was greater than GPS-PWV and RS-PWV. The MODIS-NIR-Clear PWV showed a larger deviation from GPS-PWV (MODIS-GPS Bias = 1.50 mm, RMSE = 5.76 mm) compared with RS PWV (MODIS-RS Bias = 0.75 mm, RMSE = 5.31 mm). The correlation coefficients between AERONET-PWV and the PWV from GPS

ARM Radiosondes for National Polar-Orbiting Operational Environmental Satellite System Preparatory Project Validation Field Campaign Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Borg, Lori; Tobin, David; Reale, Anthony

This IOP has been a coordinated effort involving the U.S. Department of Energy (DOE) Atmospheric Radiation (ARM) Climate Research Facility, the University of Wisconsin (UW)-Madison, and the JPSS project to validate SNPP NOAA Unique Combined Atmospheric Processing System (NUCAPS) temperature and moisture sounding products from the Cross-track Infrared Sounder (CrIS) and the Advanced Technology Microwave Sounder (ATMS). In this arrangement, funding for radiosondes was provided by the JPSS project to ARM. These radiosondes were launched coincident with the SNPP satellite overpasses (OP) at four of the ARM field sites beginning in July 2012 and running through September 2017. Combined withmore » other ARM data, an assessment of the radiosonde data quality was performed and post-processing corrections applied producing an ARM site Best Estimate (BE) product. The SNPP targeted radiosondes were integrated into the NOAA Products Validation System (NPROVS+) system, which collocated the radiosondes with satellite products (NOAA, National Aeronautics and Space Administration [NASA], European Organisation for the Exploitation of Meteorological Satellites [EUMETSAT], Geostationary Operational Environmental Satellite [GOES], Constellation Observing System for Meteorology, Ionosphere, and Climate [COSMIC]) and Numerical Weather Prediction (NWP forecasts for use in product assessment and algorithm development. This work was a fundamental, integral, and cost-effective part of the SNPP validation effort and provided critical accuracy assessments of the SNPP temperature and water vapor soundings.« less

Meteorological Automatic Weather Station (MAWS) Instrument Handbook

DOE Office of Scientific and Technical Information (OSTI.GOV)

Holdridge, Donna J; Kyrouac, Jenni A

The Meteorological Automatic Weather Station (MAWS) is a surface meteorological station, manufactured by Vaisala, Inc., dedicated to the balloon-borne sounding system (BBSS), providing surface measurements of the thermodynamic state of the atmosphere and the wind speed and direction for each radiosonde profile. These data are automatically provided to the BBSS during the launch procedure and included in the radiosonde profile as the surface measurements of record for the sounding. The MAWS core set of measurements is: Barometric Pressure (hPa), Temperature (°C), Relative Humidity (%), Arithmetic-Averaged Wind Speed (m/s), and Vector-Averaged Wind Direction (deg). The sensors that collect the core variablesmore » are mounted at the standard heights defined for each variable.« less

New Radiosonde Temperature Bias Adjustments for Potential NWP Applications Based on GPS RO Data

NASA Astrophysics Data System (ADS)

Sun, B.; Reale, A.; Ballish, B.; Seidel, D. J.

2014-12-01

Conventional radiosonde observations (RAOBs), along with satellite and other in situ data, are assimilated in numerical weather prediction (NWP) models to generate a forecast. Radiosonde temperature observations, however, have solar and thermal radiation induced biases (typically a warm daytime bias from sunlight heating the sensor and a cold bias at night as the sensor emits longwave radiation). Radiation corrections made at stations based on algorithms provided by radiosonde manufacturers or national meteorological agencies may not be adequate, so biases remain. To adjust these biases, NWP centers may make additional adjustments to radiosonde data. However, the radiation correction (RADCOR) schemes used in the NOAA NCEP data assimilation and forecasting system is outdated and does not cover several widely-used contemporary radiosonde types. This study focuses on work whose objective is to improve these corrections and test their impacts on the NWP forecasting and analysis. GPS Radio Occultation (RO) dry temperature (Tdry) is considered to be highly accurate in the upper troposphere and low stratosphere where atmospheric water vapor is negligible. This study uses GPS RO Tdry from the Constellation Observing System for Meteorology, Ionosphere, and Climate (COSMIC) as the reference to quantify the radiation induced RAOB temperature errors by analyzing ~ 3-yr collocated RAOB and COSMIC GPS RO data compile by the NOAA Products Validation System (NPROVS). The new radiation adjustments are developed for different solar angle categories and for all common sonde types flown in the WMO global operational upper air network. Results for global and several commonly used sondes are presented in the context of NCEP Global Forecast System observation-minus-background analysis, indicating projected impacts in reducing forecast error. Dedicated NWP impact studies to quantify the impact of the new RADCOR schemes on the NCEP analyses and forecast are under consideration.

Minimizing yagi-uda radiosonde receiver antenna size using minkowski curve fractal model

NASA Astrophysics Data System (ADS)

Sani, Arman; Suherman

2018-03-01

This paper discusses Yagi-Uda antenna design for radiosonde earth station receiver. The design was performed by using Minkowski curve fractal model to reduce physical dimension. The antenna design should fulfil the following requirements: work on frequency of 433MHz, match to the 50 Ohm of radiosonde characteristic impedance, the expected gain is higher than 10 dBi, VSWR is smaller than 2 and the expected bandwidth is higher than 10 MHz. Antenna design and evaluation were conducted by using MMANA-GAL simulator. The evaluation of the designed antenna shows that the Yagi-Uda antenna designed by using Minkowski curve model successfully reduces antenna size up to 9.41% and reduces number of elements about 33%.

Initializing a Mesoscale Boundary-Layer Model with Radiosonde Observations

NASA Astrophysics Data System (ADS)

Berri, Guillermo J.; Bertossa, Germán

2018-01-01

A mesoscale boundary-layer model is used to simulate low-level regional wind fields over the La Plata River of South America, a region characterized by a strong daily cycle of land-river surface-temperature contrast and low-level circulations of sea-land breeze type. The initial and boundary conditions are defined from a limited number of local observations and the upper boundary condition is taken from the only radiosonde observations available in the region. The study considers 14 different upper boundary conditions defined from the radiosonde data at standard levels, significant levels, level of the inversion base and interpolated levels at fixed heights, all of them within the first 1500 m. The period of analysis is 1994-2008 during which eight daily observations from 13 weather stations of the region are used to validate the 24-h surface-wind forecast. The model errors are defined as the root-mean-square of relative error in wind-direction frequency distribution and mean wind speed per wind sector. Wind-direction errors are greater than wind-speed errors and show significant dispersion among the different upper boundary conditions, not present in wind speed, revealing a sensitivity to the initialization method. The wind-direction errors show a well-defined daily cycle, not evident in wind speed, with the minimum at noon and the maximum at dusk, but no systematic deterioration with time. The errors grow with the height of the upper boundary condition level, in particular wind direction, and double the errors obtained when the upper boundary condition is defined from the lower levels. The conclusion is that defining the model upper boundary condition from radiosonde data closer to the ground minimizes the low-level wind-field errors throughout the region.

Radiation Budget Profiles measured through the Atmosphere with a Return Glider Radiosonde

NASA Astrophysics Data System (ADS)

Philipona, R.; Kraeuchi, A.; Kivi, R.

2015-12-01

Very promising radiation budget profile measurements through the atmosphere were made in 2011 with a balloon borne short- and longwave net radiometer. New and improved radiation sensors from Kipp&Zonen are now used in a glider aircraft together with a standard Swiss radiosonde from Meteolabor AG. This new return glider radiosonde (RG-R), is lifted up with double balloon technique to prevent pendulum motion and to keep the radiation instruments as horizontal as possible during the ascent measuring phase. The RG-R is equipped with a release mechanism and an autopilot that flies the glider radiosonde back to the launch site, or to a predefined open space, where it releases a parachute for landing once it is 100 meter above ground. The RG-R was successfully tested and deployed for tropospheric and stratospheric radiation measurements up to 30 hPa (24 km altitude) at the GRUAN sites Payerne (Switzerland) and Sodankylä (Finland). Radiation profiles and the radiation budget through the atmosphere during different daytimes and under cloud-free and cloudy situations will be shown in relation to temperature and humidity at the surface and in the atmosphere. The RG-R flight characteristics and new measurement possibilities will also be discussed.

Evaluating the Impact of the Summit Station, Greenland Radiosonde Program on Science and Forecast Services

NASA Astrophysics Data System (ADS)

Martinez, C. J.; Starkweather, S.; Cox, C. J.; Solomon, A.; Shupe, M.

2015-12-01

Radiosondes are balloon-borne meteorological sensors used to acquire profiles of temperature and humidity. Radiosonde data are essential inputs for numerical weather prediction models and are used for climate research, particularly in the creation of reanalysis products. However, radiosonde programs are costly to maintain, in particular in the remote regions of the Arctic (e.g., $440,000/yr at Summit, Greenland), where only 40 of approximately 1000 routine global launches are made. The climate of this data-sparse region is poorly understood and forecast data assimilation procedures are designed for global applications. Thus, observations may be rejected from the data assimilation because they are too far from the model expectations. For the most cost-efficient deployment of resources and to improve forecasting methods, analyses of the effectiveness of individual radiosonde programs are necessary. Here, we evaluate how radiosondes launched twice daily (0 and 12 UTC) from Summit Station, Greenland, (72.58⁰N, 38.48⁰W, 3210 masl) influence the European Centre for Medium Range Weather Forecasting (ECMWF) operational forecasts from June 2013 through May of 2015. A statistical analysis is conducted to determine the impact of the observations on the forecast model and the meteorological regimes that the model fails to reproduce are identified. Assimilation rates in the inversion layer are lower than any other part of the troposphere. Above the inversion, assimilation rates range from 85%-100%, 60%-98%, and > 99% for temperature, humidity, and wind, respectively. The lowest assimilation rates are found near the surface, possibly associated with biases in the representation of the temperature inversion by the ECMWF model at Summit. Consequently, assimilation rates are lower near the surface during winter when strong temperature inversions are frequently observed. Our findings benefit the scientific community who uses this information for climatological analysis of the

Atmospheric Responses from Radiosonde Observations of the 2017 Total Solar Eclipse

NASA Astrophysics Data System (ADS)

Fowler, J.

2017-12-01

The Atmospheric Responses from Radiosonde Observations project during the August 21st, 2017 Total Solar Eclipse was to observe the atmospheric response under the shadow of the Moon using both research and operational earth science instruments run primarily by undergraduate students not formally trained in atmospheric science. During the eclipse, approximately 15 teams across the path of totality launched radiosonde balloon platforms in very rapid, serial sonde deployment. Our strategy was to combine a dense ground observation network with multiple radiosonde sites, located within and along the margins of the path of totality. This can demonstrate how dense observation networks leveraged among various programs can "fill the gaps" in data sparse regions allowing research ideas and questions that previously could not be approached with courser resolution data and improving the scientific understanding and prediction of geophysical and hazardous phenomenon. The core scientific objectives are (1) to make high-resolution surface and upper air observations in several sites along the eclipse path (2) to quantitatively study atmospheric responses to the rapid disappearance of the Sun across the United States, and (3) to assess the performance of high-resolution weather forecasting models in simulating the observed response. Such a scientific campaign, especially unique during a total solar eclipse, provides a rare but life-altering opportunity to attract and enable next-generation of observational scientists. It was an ideal "laboratory" for graduate, undergraduate, citizen scientists and k-12 students and staff to learn, explore and research in STEM.

Variability of Kelvin wave momentum flux from high-resolution radiosonde and radio occultation data

NASA Astrophysics Data System (ADS)

Sjoberg, J. P.; Zeng, Z.; Ho, S. P.; Birner, T.; Anthes, R. A.; Johnson, R. H.

2017-12-01

Direct measurement of momentum flux from Kelvin waves in the stratosphere remains challenging. Constraining this flux from observations is an important step towards constraining the flux from models. Here we present results from analyses using linear theory to estimate the Kelvin wave amplitudes and momentum fluxes from both high-resolution radiosondes and from radio occultation (RO) data. These radiosonde data are from a contiguous 11-year span of soundings performed at two Department of Energy Atmospheric Radiation Measurement sites, while the RO data span 14 years from multiple satellite missions. Daily time series of the flux from both sources are found to be in quantitative agreement with previous studies. Climatological analyses of these data reveal the expected seasonal cycle and variability associated with the quasi-biennial oscillation. Though both data sets provide measurements on distinct spatial and temporal scales, the estimated flux from each provides insight into separate but complimentary aspects of how the Kelvin waves affect the stratosphere. Namely, flux derived from radiosonde sites provide details on the regional Kelvin wave variability, while the flux from RO data are zonal mean estimates.

Analyzing nearly four decades of historical radiosonde observations of tropical tropopause layer and cold-point temperatures

NASA Astrophysics Data System (ADS)

Gilford, D.; Randel, W. J.

2017-12-01

An understanding of historical trends and variability in the thermal structure of the tropical tropopause layer (TTL) is important for assessing climate and investigating TTL processes. In particular, the cold-point tropopause (CPT) plays an important role in stratospheric dehydration, the potential intensities of tropical cyclones, and other forms of stratospheric-tropospheric coupling. Uncertainties and biases of in-situ observations, however, make long-term estimation of TTL temperatures challenging, especially in the early decades of the satellite era. The goal of this study is to construct and analyze a long-term record of radiosondes temperatures with minimal biases. Temperature observations from 1979-present are drawn from the Integrated Global Radiosonde Archive version 2 (IGRA2). Vertically integrated radiosonde temperatures are compared with brightness temperatures from the Microwave Sounding Units (MSU) Lower Stratosphere channel to identify the radiosonde stations with the smallest temporal discontinuities. Insights from this comparison highlight the importance of independent measurements when evaluating TTL temperatures. The 38-year dataset constructed from IGRA2 stations with the smallest biases spans the tropics and has high vertical resolution, permitting reasonable estimates of the CPT temperature. Radiosonde temperatures show good agreement with GPS radio occultation measurements over the past decade. A multivariate regression model incorporating the Quasi-Biennial Oscillation and the El Nino Southern Oscillation is fit to the deseasonalized data to evaluate the spatial and temporal structures in its variability. Long-term trends in CPT temperatures are considered in the context of historical estimates from climate models. Correlations with TTL water vapor concentrations from the Stratospheric Water and OzOne Satellite Homogenized (SWOOSH) data set suggest a strong relationship between the historically observed CPT temperatures and dehydration.

Comparison of Water Vapor Measurements by Airborne Sun Photometer and Near-Coincident in Situ and Satellite Sensors during INTEX/ITCT 2004

NASA Technical Reports Server (NTRS)

Livingston, J.; Schmid, B.; Redemann, J.; Russell, P. B.; Ramirez, S. A.; Eilers, J.; Gore, W.; Howard, S.; Pommier, J.; Fetzer, E. J.;

Validation of a radiosonde-based cloud layer detection method against a ground-based remote sensing method at multiple ARM sites

NASA Astrophysics Data System (ADS)

Zhang, Jinqiang; Li, Zhanqing; Chen, Hongbin; Cribb, Maureen

2013-01-01

Cloud vertical structure is a key quantity in meteorological and climate studies, but it is also among the most difficult quantities to observe. In this study, we develop a long-term (10 years) radiosonde-based cloud profile product for the U.S. Department of Energy's Atmospheric Radiation Measurement (ARM) program Southern Great Plains (SGP), Tropical Western Pacific (TWP), and North Slope of Alaska (NSA) sites and a shorter-term product for the ARM Mobile Facility (AMF) deployed in Shouxian, Anhui Province, China (AMF-China). The AMF-China site was in operation from 14 May to 28 December 2008; the ARM sites have been collecting data for over 15 years. The Active Remote Sensing of Cloud (ARSCL) value-added product (VAP), which combines data from the 95-GHz W-band ARM Cloud Radar (WACR) and/or the 35-GHz Millimeter Microwave Cloud Radar (MMCR), is used in this study to validate the radiosonde-based cloud layer retrieval method. The performance of the radiosonde-based cloud layer retrieval method applied to data from different climate regimes is evaluated. Overall, cloud layers derived from the ARSCL VAP and radiosonde data agree very well at the SGP and AMF-China sites. At the TWP and NSA sites, the radiosonde tends to detect more cloud layers in the upper troposphere.

Comparison of precipitable water vapor measurements obtained by microwave radiometry and radiosondes at the Southern Great ...

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lesht, B.M.; Liljegren, J.C.

1996-12-31

Comparisons between the precipitable water vapor (PWV) estimated by passive microwave radiometers (MWRs) and that obtained by integrating the vertical profile of water vapor density measured by radiosondes (BBSS) have generally shown good agreement. These comparisons, however, have usually been done over rather short time periods and consequently within limited ranges of total PWV and with limited numbers of radiosondes. We have been making regular comparisons between MWR and BBSS estimates of PWV at the Southern Great Plains Cloud and Radiation Testbed (SGP/CART) site since late 1992 as part of an ongoing quality measurement experiment (QME). This suite of comparisonsmore » spans three annual cycles and a relatively wide range of total PWV amounts. Our findings show that although for the most part the agreement is excellent, differences between the two measurements occur. These differences may be related to the MWR retrieval of PWV and to calibration variations between radiosonde batches.« less

Comparisons of the NASA ER-2 meteorological measurement system with radar tracking and radiosonde data

NASA Technical Reports Server (NTRS)

Gaines, Steven E.; Bowen, Stuart W.; Hipskind, R. S.; Bui, T. P.; Chan, K. R.

1992-01-01

Measurements of aircraft longitude, latitude, and velocity, and measurements of atmospheric pressure, temperature, and horizontal wind from the meteorological measurement system (MMS) on board the NASA ER-2 aircraft were compared with independent measurements of these quantities from radiosondes and radar tracking of both the ER-2 and radiosonde balloons. In general, the comparisons were good and within the expected measurement accuracy and natural variability of the meteorological parameters. Radar tracking of the ER-2 resolved the velocity and position drift of the inertial navigation system (INS). The rms errors in the horizontal velocity components of the ER-2, due to INS errors, were found to be 0.5 m/s. The magnitude of the drift in longitude and latitude depends on the sign and magnitude of the corresponding component velocity drift and can be a few hundredths of a degree. The radar altitudes of the ER-2 and radiosondes were used as the basis for comparing measurements of atmospheric pressure, temperature, and horizontal wind from these two platforms. The uncertainty in the MMS horizontal wind measurement is estimated to be +/- 2.5 m/s. The accuracy of the MMS pressure and temperature measurements were inferred to be +/- 0.3 hPa and +/- 0.3 K.

The predictive value of IL28B rs12979860, rs11881222 and rs8099917 polymorphisms and IP-10 in the therapeutic response of Egyptian genotype 4 patients.

PubMed

Derbala, Moutaz; Rizk, Nasser M; Al-Kaabi, Saad; John, Anil; Sharma, Manik; El-dweik, Nazeeh; Yakoob, Rafie; Pasic, Fuad; Almohanadi, Muneera; Alejji, Khalid; Abdelmola, Abdulatif; Butt, Mohamed

2013-09-01

Interleukin-28B (IL28B) polymorphisms have previously been reported to be strongly associated with spontaneous and treatment-induced HCV viral clearance. To assess the impact of four different IL28B polymorphisms and their haplotype combination and interferon-c inducible protein 10 (IP-10) in response to treatment in Egyptian genotype 4 patients. 159 HCV-genotype 4 patients were included. All patients were treated with Peginterferon alph2a/Ribavirin for 48 wk. The following polymorphisms rs12979860, rs11881222, rs8103142 and rs8099917 and rs80803142 of Il-28 were known to be associated with the sustained virological response. They were genotyped using the TaqMan assay. IP-10 was assessed by Eliza. The data indicated that all SNPs are within the Hardy-Weinberg Equilibrium (HWE) except for rs8103142 (p=6.255(-9)), therefore it was excluded from the study since it deviates from HWE-P. The CC, AA and TT genotypes of rs12979860, rs11881222 and rs8099917 were the more frequent genotypes among the responders at RVR, EVR, ETR and SVR, respectively. The frequency of CC, CT, and TT genotype was 46.4%, 38.1% and 15.5% among responders of RVR, and was 46.9%, 45.9% and 7.2 among responders of SVR for rs12979860, respectively. The relapse rate was 18.0% and 16.0 % during EVR and ETR, while the response rate was 52.8%, 58.5%, 59.7% and 61.6% after 4, 12, 48 and 72 weeks of treatment. The transient virological response (TVR) was 6.9% among HCV patients. The results showed that the odds ratio and 95% CI of HCV genotype 4 patients to have a better sustained response to treatment (SVR) was 2.92, (1.83-4.68, p=2.01(-5)), 2.89 (1.79-4.70, p=2.53(-5)), and 2.73 (0.21-0.65, p=0.0007) for those with the major allele "C" of rs12979860, the "A" allele of rs11881222, and the "T" allele of rs8099917, respectively. Furthermore, the positive predictive value (PPV) of the major homozygous alleles for SVR with better response to therapy was in the following order: 78.69%, 68.42%, and 32.14% with

Optimization of GPS water vapor tomography technique with radiosonde and COSMIC historical data

NASA Astrophysics Data System (ADS)

Ye, Shirong; Xia, Pengfei; Cai, Changsheng

2016-09-01

The near-real-time high spatial resolution of atmospheric water vapor distribution is vital in numerical weather prediction. GPS tomography technique has been proved effectively for three-dimensional water vapor reconstruction. In this study, the tomography processing is optimized in a few aspects by the aid of radiosonde and COSMIC historical data. Firstly, regional tropospheric zenith hydrostatic delay (ZHD) models are improved and thus the zenith wet delay (ZWD) can be obtained at a higher accuracy. Secondly, the regional conversion factor of converting the ZWD to the precipitable water vapor (PWV) is refined. Next, we develop a new method for dividing the tomography grid with an uneven voxel height and a varied water vapor layer top. Finally, we propose a Gaussian exponential vertical interpolation method which can better reflect the vertical variation characteristic of water vapor. GPS datasets collected in Hong Kong in February 2014 are employed to evaluate the optimized tomographic method by contrast with the conventional method. The radiosonde-derived and COSMIC-derived water vapor densities are utilized as references to evaluate the tomographic results. Using radiosonde products as references, the test results obtained from our optimized method indicate that the water vapor density accuracy is improved by 15 and 12 % compared to those derived from the conventional method below the height of 3.75 km and above the height of 3.75 km, respectively. Using the COSMIC products as references, the results indicate that the water vapor density accuracy is improved by 15 and 19 % below 3.75 km and above 3.75 km, respectively.

Evaluation of transcobalamin II rs1801198 and transcobalamin II receptor rs2336573 gene polymorphisms in recurrent spontaneous abortion.

PubMed

Hashemi, Mohammad; Mokhtari, Mojgan; Yazdani-Shahrbabaki, Vajiheh; Danesh, Hiva; Bizhani, Fatemeh; Taheri, Mohsen

2018-03-14

It has been proposed that transcobalamin 2 (TCN2) and the transcobalamin 2 receptor (TCN2R) are associated with idiopathic recurrent spontaneous abortion (RSA). The aim of the present study was to investigate the impact of TCN2 rs1801198 and TCN2R rs2336573 polymorphism on RSA in a sample of Iranian population. This case-control study was done on 92 RSA patients and 93 normal, fertile women. Genotyping of the TCN2 rs1801198 and TCN2R rs2336573 variants was done by polymerase chain reaction restriction fragment length polymorphism (PCR-RFLP). The findings showed no significant association between the TCN2 rs1801198 and TCN2R rs2336573 polymorphisms and the risk/protection of RSA. Our results did not support an association between the TCN2 polymorphism and the risk of RSA in a sample of southeast Iranian population. Larger studies with different ethnicities are needed to evaluate the possible impact of TCN2 and TCN2R polymorphisms on the pathogenesis of RSA. Impact statement What is already known on this subject? Recurrent spontaneous abortion (RSA), a multifactorial condition, is one of the most common complications of pregnancy. It has been proposed that genetic polymorphisms play a role in the pathogenesis of RSA. Few studies have examined the association between TNC2 and TCN2R polymorphisms and the RSA risk and the findings were inconsistent. The aim of the current study was to determine the possible association between the TCN2 rs1801198 and TCN2R rs2336573 polymorphisms and the RSA in a sample of the southeast Iranian population. What do the results of the study add? The findings of the present case-control study did not support an association between the TCN2 rs1801198 and TCN2R rs2336573 polymorphisms and the risk of RSA in a sample of the Iranian population. What are the implications of these findings for clinical practice and future research? The findings of this study may provide a basis for future studies with larger sample sizes and different ethnicities

Assessment of NOAA NUCAPS upper air temperature profiles using COSMIC GPS radio occultation and ARM radiosondes

NASA Astrophysics Data System (ADS)

Feltz, M. L.; Borg, L.; Knuteson, R. O.; Tobin, D.; Revercomb, H.; Gambacorta, A.

2017-09-01

The U.S. National Oceanic and Atmospheric Administration (NOAA) recently began operational processing to derive vertical temperature profiles from two new sensors, Cross-Track Infrared Sounder and Advanced Technology Microwave Sounder, which were developed for the next generation of U.S. weather satellites. The NOAA-Unique Combined Atmospheric Processing System (NUCAPS) has been developed by NOAA to routinely process data from future Joint Polar Satellite System operational satellites and the preparatory Suomi-NPP satellite. This paper assesses the NUCAPS vertical temperature profile product from the upper troposphere into the middle stratosphere using radiosonde and GPS radio occultation (RO) data. Radiosonde data from the Department of Energy Atmospheric Radiation Measurement (ARM) program are=] compared to both the NUCAPS and GPS RO temperature products to evaluate bias and RMS errors. At all three fixed ARM sites for time periods investigated the NUCAPS temperature in the 100-40 hPa range is found to have an average bias to the radiosondes of less than 0.45 K and an RMS error of less than 1 K when temperature averaging kernels are applied. At a 95% confidence level, the radiosondes and RO were found to agree within 0.4 K at the North Slope of Alaska site and within 0.83 K at Southern Great Plains and Tropical Western Pacific. The GPS RO-derived dry temperatures, obtained from the University Corporation for Atmospheric Research Constellation Observing System for Meteorology, Ionosphere, and Climate (COSMIC) mission, are used as a common reference for the intercomparison of NUCAPS temperature products to similar products produced by NASA from Atmospheric Infrared Sounder (AIRS) and by European Organisation for the Exploitation of Meteorological Satellites from MetOp-B Infrared Atmospheric Sounding Interferometer (IASI). For seasonal and zonal scales, the NUCAPS agreement with AIRS and IASI is less than 0.5 K after application of averaging kernels.

Evaluating tropospheric humidity from GPS radio occultation, radiosonde, and AIRS from high-resolution time series

NASA Astrophysics Data System (ADS)

Rieckh, Therese; Anthes, Richard; Randel, William; Ho, Shu-Peng; Foelsche, Ulrich

2018-05-01

While water vapor is the most important tropospheric greenhouse gas, it is also highly variable in both space and time, and water vapor concentrations range over 3 orders of magnitude in the troposphere. These properties challenge all observing systems to accurately measure and resolve the vertical structure and variability of tropospheric humidity. In this study we characterize the humidity measurements of various observing techniques, including four separate Global Positioning System (GPS) radio occultation (RO) humidity retrievals (University Corporation for Atmospheric Research (UCAR) direct, UCAR one-dimensional variational retrieval (1D-Var), Wegener Center for Climate and Global Change (WEGC) 1D-Var, Jet Propulsion Laboratory (JPL) direct), radiosonde, and Atmospheric Infrared Sounder (AIRS) data. Furthermore, we evaluate how well the ERA-Interim reanalysis and NCEP Global Forecast System (GFS) model perform in analyzing water vapor at different levels. To investigate detailed vertical structure, we analyzed time-height cross sections over four radiosonde stations in the tropical and subtropical western Pacific for the year 2007. We found that the accuracy of RO humidity is comparable to or better than both radiosonde and AIRS humidity over 800 to 400 hPa, as well as below 800 hPa if super-refraction is absent. The various RO retrievals of specific humidity agree within 20 % in the 1000-400 hPa layer, and differences are most pronounced above 600 hPa.

Comparison of trends and abrupt changes of the South Asia high from 1979 to 2014 in reanalysis and radiosonde datasets

NASA Astrophysics Data System (ADS)

Shi, Chunhua; Huang, Ying; Guo, Dong; Zhou, Shunwu; Hu, Kaixi; Liu, Yu

2018-05-01

The South Asian High (SAH) has an important influence on atmospheric circulation and the Asian climate in summer. However, current comparative analyses of the SAH are mostly between reanalysis datasets and there is a lack of sounding data. We therefore compared the climatology, trends and abrupt changes in the SAH in the Japanese 55-year Reanalysis (JRA-55) dataset, the National Centers for Environmental Prediction Climate Forecast System Reanalysis (NCEP-CFSR) dataset, the European Center for Medium-Range Weather Forecasts Reanalysis Interim (ERA-interim) dataset and radiosonde data from China using linear analysis and a sliding t-test. The trends in geopotential height in the control area of the SAH were positive in the JRA-55, NCEP-CFSR and ERA-interim datasets, but negative in the radiosonde data in the time period 1979-2014. The negative trends for the SAH were significant at the 90% confidence level in the radiosonde data from May to September. The positive trends in the NCEP-CFSR dataset were significant at the 90% confidence level in May, July, August and September, but the positive trends in the JRA-55 and ERA-Interim were only significant at the 90% confidence level in September. The reasons for the differences in the trends of the SAH between the radiosonde data and the three reanalysis datasets in the time period 1979-2014 were updates to the sounding systems, changes in instrumentation and improvements in the radiation correction method for calculations around the year 2000. We therefore analyzed the trends in the two time periods of 1979-2000 and 2001-2014 separately. From 1979 to 2000, the negative SAH trends in the radiosonde data mainly agreed with the negative trends in the NCEP-CFSR dataset, but were in contrast with the positive trends in the JRA-55 and ERA-Interim datasets. In 2001-2014, however, the trends in the SAH were positive in all four datasets and most of the trends in the radiosonde and NCEP-CFSR datasets were significant. It is

Variability of Radiosonde-Observed Precipitable Water in the Baltic Region

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jakobson, Erko; Ohvril, H.; Okulov, O.

The total mass of columnar water vapor (precipitable water, W) is an important parameter of atmospheric thermodynamic and radiative models. In this work radiosonde observations from 17 aerological stations in the Baltic region during 14 years, 1989?2002, were used to examine the variability of precipitable water. A table of monthly and annual means of W for the stations is given. Seasonal and annual means of W are expressed as linear functions of geographical latitude. Linear formulas are also derived for parameterization of precipitable water as function of surface water vapor pressure at each station.

Interleukin-1β rs1143627 polymorphism with susceptibility to periodontal disease

PubMed Central

Huang, Wei; He, Bing-Yang; Shao, Jun; Jia, Xiao-Wei; Yuan, Ya-Di

2017-01-01

Association between interleukin-1 beta (IL-1β) rs1143627 polymorphism and periodontal disease susceptibility was inconsistent; hence we performed this meta-analysis to explore the precise correlation between them. The degree of association was appraised through calculating pooled odds ratio (OR) and its 95% confidence interval (CI). The databases known as PubMed, Embase, and Chinese National Knowledge Infrastructure were searched up to October 26, 2016. A total of 8 eligible case-control studies were finally included, which involved 229 aggressive periodontitis patients, 382 chronic periodontitis patients, and 555 healthy controls. All the five genetic models revealed a non-significant association between IL-1β rs1143627 polymorphism and periodontal disease susceptibility (TT vs. CC: OR = 1.22, 95% CI = 0.80-1.87; CT+TT vs. CC: OR = 0.66, 95% CI = 0.44-1.01; TT vs. CT + CC: OR = 1.19, 95% CI = 0.81-1.74; T vs. C: OR = 0.92, 95% CI = 0.81-1.12; CT vs. CC: OR = 0.92, 95% CI = 0.69-1.23). Sensitivity analyses indicated that the results were robust and the subgroup analyses reached similar conclusions. IL-1β rs1143627 polymorphism is not related to periodontal disease susceptibility in the overall population based on the current evidence, but further studies are required in more large scale sample size with risk factor adjusted. PMID:28404906

Evaluation of Atmospheric Precipitable Water from Reanalysis Products Using Homogenized Radiosonde Observations over China

NASA Astrophysics Data System (ADS)

Zhao, T.; Wang, J.; Dai, A.

2015-12-01

Many multi-decadal atmospheric reanalysis products are avialable now, but their consistencies and reliability are far from perfect. In this study, atmospheric precipitable water (PW) from the NCEP/NCAR, NCEP/DOE, MERRA, JRA-55, JRA-25, ERA-Interim, ERA-40, CFSR and 20CR reanalyses is evaluated against homogenized radiosonde observations over China during 1979-2012 (1979-2001 for ERA-40). Results suggest that the PW biases in the reanalyses are within ˜20% for most of northern and eastern China, but the reanalyses underestimate the observed PW by 20%-40% over western China, and by ˜60% over the southwestern Tibetan Plateau. The newer-generation reanalyses (e.g., JRA25, JRA55, CFSR and ERA-Interim) have smaller root-mean-square error (RMSE) than the older-generation ones (NCEP/NCAR, NCEP/DOE and ERA-40). Most of the reanalyses reproduce well the observed PW climatology and interannual variations over China. However, few reanalyses capture the observed long-term PW changes, primarily because they show spurious wet biases before about 2002. This deficiency results mainly from the discontinuities contained in reanalysis RH fields in the mid-lower troposphere due to the wet bias in older radiosonde records that are assimilated into the reanalyses. An empirical orthogonal function (EOF) analysis revealed two leading modes that represent the long-term PW changes and ENSO-related interannual variations with robust spatial patterns. The reanalysis products, especially the MERRA and JRA-25, roughly capture these EOF modes, which account for over 50% of the total variance. The results show that even during the post-1979 satellite era, discontinuities in radiosonde data can still induce large spurious long-term changes in reanalysis PW and other related fields. Thus, more efforts are needed to remove spurious changes in input data for future long-term reanlayses.

Moisture analysis from radiosonde and microwave spectrometer data

NASA Technical Reports Server (NTRS)

Haydu, K. J.; Krishnamurti, T. N.

1981-01-01

A method for analysis of the horizontal and vertical distributions of the moisture field utilizing satellite, upper air and surface data is proposed in this paper. A brief overview of the microwave sensors on board Nimbus 5 and 6 is also presented. A technique is provided utilizing the radiosonde data sets to calibrate the satellite field of total precipitable water. Next, the calibrated satellite-derived field is utilized along with ship and coastal reports of moisture, and a vertical structure function to generate vertical distribution of moisture and thus provide a mapping of specific humidity at several levels in the troposphere. Utilizing these procedures, analyses for several case studies were performed. The resultant maps show detailed distribution of specific humidity along with some interesting climatological features. A reasonable acceptance of the available aerological data sets by the analysis scheme is demonstrated.

The Association Between Fog and Temperature Inversions from Ground and Radiosonde Observations in East Greenland

NASA Astrophysics Data System (ADS)

Gilson, G.; Jiskoot, H.

2016-12-01

Many Arctic glaciers terminate along coasts where temperature inversions and sea fog are frequent during summer. Both can influence glacier ablation, but the effects of fog may be complex. To understand fog's physical and radiative properties and its association to temperature inversions it is important to determine accurate Arctic coastal fog climatologies In previous research we determined that fog in East Greenland peaks in the melt season and can be spatially extensive over glacierized terrain. In this study we aim to understand which environmental factors influence fog occurrence in East Greenland; understand the association between fog and temperature inversions; and quantify fog height. We analyzed fog observations and other weather data from coastal synoptic weather stations, and extracted temperature inversions from the Integrated Global Radiosonde Archive radiosonde profiles. Fog height was calculated from radiosonde profiles, based on a method developed for radiation fog which we expanded to include advection and steam fog. Our results show that Arctic coastal fog requires sea ice breakup and a sea breeze with wind speed between 1-4 m/s. Fog is mostly advective, occurring under stable synoptic conditions characterized by deep and strong low-level temperature inversions. Steam fog may occur 5-30% of the time. Fog can occur under near-surface subsidence, with a subsaturated inversion base, or a saturated inversion base. We classified five types of fog based on their vertical sounding characteristics: only at the surface, below an inversion, capped by an inversion, inside a surface-based inversion, or inside a low-level inversion. Fog is commonly 100-400 m thick, often reaching the top of the boundary layer. Fog height is greater at northern stations, where daily fog duration is longer and relative humidity lower. Our results will be included in glacier energy-balance models to account for the influence of fog and temperature inversions on glacier melt.

IL28B gene polymorphism rs12979860, but not rs8099917, contributes to the occurrence of chronic HCV infection in Uruguayan patients.

PubMed

Echeverría, Natalia; Chiodi, Daniela; López, Pablo; Sanchez Ciceron, Adriana; Angulo, Jenniffer; López-Lastra, Marcelo; Silvera, Paola; Canavesi, Adrian; Bianchi, Carla; Colistro, Valentina; Cristina, Juan; Hernandez, Nelia; Moreno, Pilar

2018-03-02

Host single-nucleotide polymorphisms (SNPs) near the interleukin 28B (IL28B) locus are associated with sustained virological response to antiviral therapy and with spontaneous Hepatitis C Virus (HCV) clearance. Prevalence of these SNPs varies depending on ethnicity. The impact of IL28B SNPs in HCV-infected patients is currently unknown in Uruguay. Therefore, the aim of this study was to evaluate and compare the distribution of polymorphisms in the IL28B gene (rs12979860 and rs8099917) among HCV-infected patients and healthy individuals in Uruguay and thus assess their possible association with the establishment of HCV infection. DNA was recovered from 92 non-infected individuals and 78 HCV-infected patients and SNPs were determined by RFLP and allelic discrimination by real-time PCR. The distribution of rs12979860 genotypes for the infected population was 29.5%-CC, 47.4%-CT and 23.1%-TT and for the control group 45.7%, 42.4% and 11.9%, respectively. Prevalence in both infected and uninfected individuals is similar to that reported in other countries with admixed populations. The distribution of rs8099917 genotypes for the infected population was 57.7%-TT, 27.2%-TG and 14.1%-GG and for the control group 60.9%, 33.7% and 5.4%, respectively. The comparison of rs12979860 genotype distribution between the two populations evidenced a higher prevalence of the favourable genotype (CC) in the uninfected control group (p < 0.05). Additionally, results generated using logistic regression analysis show that individuals carrying rs12979860-TT or CT genotypes have a higher likelihood of developing chronic hepatitis upon infection with HCV, when compared to CC carriers, considering rs8099917 genotype as constant. Patients with HCV infection have a statistically significant lower prevalence of the favourable rs12979860 genotype when compared to uninfected individuals; therefore we can establish that only IL28B rs12979860-CT and TT genotypes seem to contribute to the occurrence

Evaluation of atmospheric precipitable water from reanalysis products using homogenized radiosonde observations over China

NASA Astrophysics Data System (ADS)

Zhao, Tianbao; Wang, Juanhuai; Dai, Aiguo

2015-10-01

Many multidecadal atmospheric reanalysis products are available now, but their consistencies and reliability are far from perfect. In this study, atmospheric precipitable water (PW) from the National Centers for Environmental Prediction/National Center for Atmospheric Research (NCEP/NCAR), NCEP/Department of Energy (DOE), Modern Era Retrospective-Analysis for Research and Applications (MERRA), Japanese 55 year Reanalysis (JRA-55), JRA-25, ERA-Interim, ERA-40, Climate Forecast System Reanalysis (CFSR), and 20th Century Reanalysis version 2 is evaluated against homogenized radiosonde observations over China during 1979-2012 (1979-2001 for ERA-40). Results suggest that the PW biases in the reanalyses are within ˜20% for most of northern and eastern China, but the reanalyses underestimate the observed PW by 20%-40% over western China and by ˜60% over the southwestern Tibetan Plateau. The newer-generation reanalyses (e.g., JRA25, JRA55, CFSR, and ERA-Interim) have smaller root-mean-square error than the older-generation ones (NCEP/NCAR, NCEP/DOE, and ERA-40). Most of the reanalyses reproduce well the observed PW climatology and interannual variations over China. However, few reanalyses capture the observed long-term PW changes, primarily because they show spurious wet biases before about 2002. This deficiency results mainly from the discontinuities contained in reanalysis relative humidity fields in the middle-lower troposphere due to the wet bias in older radiosonde records that are assimilated into the reanalyses. An empirical orthogonal function (EOF) analysis revealed two leading modes that represent the long-term PW changes and El Niño-Southern Oscillation-related interannual variations with robust spatial patterns. The reanalysis products, especially the MERRA and JRA-25, roughly capture these EOF modes, which account for over 50% of the total variance. The results show that even during the post-1979 satellite era, discontinuities in radiosonde data can still

Polymorphisms FTO rs9939609, PPARG rs1801282 and ADIPOQ rs4632532 and rs182052 but not lifestyle are associated with obesity related-traits in Mexican children.

PubMed

Muñoz-Yáñez, C; Pérez-Morales, R; Moreno-Macías, H; Calleros-Rincón, E; Ballesteros, G; González, R A; Espinosa, J

2016-01-01

Concerning the genetic factors of obesity, no consistent association between populations has been reported, which may be due to the frequency of polymorphisms, the lifestyle of studied populations and its interaction with other factors. We studied a possible association of polymorphisms FTO rs9939609, PPARG rs1801282, and ADIPOQ rs4632532 and rs182052 with obesity phenotypes in 215 Mexican children. Glucose, triglycerides, cholesterol, HDL and LDL were measured. In addition, weight, height, waist circumference and triceps skin thickness were recorded. High-energy diets and sedentary behavior were evaluated with a validated questionnaire. In contrast with other reports, only FTO rs9939609 was associated with obesity related-traits, including BMI (p = 0.03), waist circumference (p = 0.02), triceps skinfold (p = 0.03) and waist/height ratio (p = 0.01), and also with cholesterol levels (p = 0.02) and LDL (p = 0.009). Lower levels of triglycerides (p=0.04) were related with presence of PPARG rs1801282, while ADIPOQ rs4632532 showed an effect on HDL (p = 0.03) levels. On the other hand, diet, physical activity and screen time were not related with obesity. In summary, only FTO rs9939609 was associated with obesity related-traits, while PPARG2 rs1801282 and ADIPOQ rs4632532 were involved in lipid metabolism.

Polymorphisms FTO rs9939609, PPARG rs1801282 and ADIPOQ rs4632532 and rs182052 but not lifestyle are associated with obesity related-traits in Mexican children

PubMed Central

Muñoz-Yáñez, C; Pérez-Morales, R; Moreno-Macías, H; Calleros-Rincón, E; Ballesteros, G; González, R. A; Espinosa, J

2016-01-01

Abstract Concerning the genetic factors of obesity, no consistent association between populations has been reported, which may be due to the frequency of polymorphisms, the lifestyle of studied populations and its interaction with other factors. We studied a possible association of polymorphisms FTO rs9939609, PPARG rs1801282, and ADIPOQ rs4632532 and rs182052 with obesity phenotypes in 215 Mexican children. Glucose, triglycerides, cholesterol, HDL and LDL were measured. In addition, weight, height, waist circumference and triceps skin thickness were recorded. High-energy diets and sedentary behavior were evaluated with a validated questionnaire. In contrast with other reports, only FTO rs9939609 was associated with obesity related-traits, including BMI (p = 0.03), waist circumference (p = 0.02), triceps skinfold (p = 0.03) and waist/height ratio (p = 0.01), and also with cholesterol levels (p = 0.02) and LDL (p = 0.009). Lower levels of triglycerides (p=0.04) were related with presence of PPARG rs1801282, while ADIPOQ rs4632532 showed an effect on HDL (p = 0.03) levels. On the other hand, diet, physical activity and screen time were not related with obesity. In summary, only FTO rs9939609 was associated with obesity related-traits, while PPARG2 rs1801282 and ADIPOQ rs4632532 were involved in lipid metabolism. PMID:27560839

Association between polymorphisms in the promoter region of miR-17-92 cluster and systemic lupus erythematosus in a Chinese population.

PubMed

Wang, Rong; Wang, Chun-Fang; Qin, Hai-Mei; Lu, Yu-Lan; Wei, Gui-Jiang; Huang, Hua-Tuo; Xiang, Yang; Wang, Jun-Li; Lan, Yan; Wei, Ye-Sheng

2018-05-16

The aim of this study was to investigate the association of genetic polymorphisms in the promoter region of miR-17-92 with systemic lupus erythematosus (SLE). The gene polymorphism was analysed using SNaPshot in 312 SLE patients and 396 controls. Relative expression of miR-17-92 was measured by quantitative real-time PCR. Association was found between rs9515692 and a decreased risk of SLE (CT vs CC: OR = 0.65, 95%CI, 0.46-0.92, P = .014; CT+TT vs CC: OR = 0.64, 95%CI, 0.46-0.90, P = .009; T vs C: OR = 0.69, 95%CI, 0.52-0.92, P = .010, respectively). Haplotype analysis showed that C-G-G, C-A-A haplotypes were associated with an increased SLE risk (OR=4.46, 95%CI, 2.17-9.17, P < 0.001; OR=2.33, 95%CI, 1.44-3.76, P < 0.001, respectively). T allele and CT+TT genotypes in rs9515692 were associated with decreased risk of anti-dsDNA in SLE (CT+TT vs CC: OR = 0.42, 95%CI = 0.24-0.72, P = .002; T vs A: OR = 0.49, 95%CI = 0.31-0.79, P = .003). Moreover, rs9515692 CT+TT genotypes had a higher level of miR-17 as compared to CC genotype (P = .017). These findings suggest that the rs9515692 CT+TT genotypes were a protective factor for the susceptibility of SLE, probably by increasing the expression of miR-17. © 2018 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine.

Atmospheric radiation measurement program facilities newsletter, April 2001.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Holdridge, D. J.

Intensive Observation Period Projects Scheduled--Several IOP projects have been scheduled for the SGP CART site this spring. These projects either have already begun or will begin shortly. Radiosondes--The RS-90 Transition IOP is currently under way. The RS-90 model radiosonde is gradually replacing the older RS-80 model. Radiosondes are instrument packages attached to and launched by weather balloons. The instruments measure atmospheric pressure, temperature, and relative humidity as the balloon rises through the air. The new RS-90 model is a high-performance radiosonde with fast-response sensors capable of providing data for each variable every second. The relatively environmentally friendly package is constructedmore » of cardboard and steel rather than Styrofoam, and it has a water-activated battery that contains no toxic substances. The RS-90 Transition IOP is taking place during April. Operators will launch both the old RS-80 and the new RS-90 radiosondes simultaneously once each day to obtain duplicate vertical profiles of the atmosphere for comparison. This procedure will also allow data users to test the output from the old and new radiosondes in models. Narrow Field of View (NFOV) Solar Spectrometer Cloud Optical Depth Retrieval Campaign--The NFOV IOP is scheduled to take place on May 7-August 31, 2001. A researcher from Pennsylvania State University will be deploying a dual-spectrometer instrument that measures the hemispheric flux and zenith NFOV radiance over a wavelength range of 300- 1000 nanometers. (One nanometer equals 1 billionth of a meter or 0.000000039 inches.) This wavelength range includes the ultraviolet, visible, and near-infrared spectra. These measurements are used to estimate cloud optical depth--a quantity related to the amount of solar radiation intercepted by a cloud--for broken cloud fields over vegetated surfaces. The IOP measurements will be compared with optical depth measurements made by SGP instruments. Precision Gas Sampling

Is it feasible to estimate radiosonde biases from interlaced measurements?

NASA Astrophysics Data System (ADS)

Kremser, Stefanie; Tradowsky, Jordis S.; Rust, Henning W.; Bodeker, Greg E.

2018-05-01

Upper-air measurements of essential climate variables (ECVs), such as temperature, are crucial for climate monitoring and climate change detection. Because of the internal variability of the climate system, many decades of measurements are typically required to robustly detect any trend in the climate data record. It is imperative for the records to be temporally homogeneous over many decades to confidently estimate any trend. Historically, records of upper-air measurements were primarily made for short-term weather forecasts and as such are seldom suitable for studying long-term climate change as they lack the required continuity and homogeneity. Recognizing this, the Global Climate Observing System (GCOS) Reference Upper-Air Network (GRUAN) has been established to provide reference-quality measurements of climate variables, such as temperature, pressure, and humidity, together with well-characterized and traceable estimates of the measurement uncertainty. To ensure that GRUAN data products are suitable to detect climate change, a scientifically robust instrument replacement strategy must always be adopted whenever there is a change in instrumentation. By fully characterizing any systematic differences between the old and new measurement system a temporally homogeneous data series can be created. One strategy is to operate both the old and new instruments in tandem for some overlap period to characterize any inter-instrument biases. However, this strategy can be prohibitively expensive at measurement sites operated by national weather services or research institutes. An alternative strategy that has been proposed is to alternate between the old and new instruments, so-called interlacing, and then statistically derive the systematic biases between the two instruments. Here we investigate the feasibility of such an approach specifically for radiosondes, i.e. flying the old and new instruments on alternating days. Synthetic data sets are used to explore the

Quality Controlled Radiosonde Profile from MC3E

DOE Data Explorer

Toto, Tami; Jensen, Michael

2014-11-13

The sonde-adjust VAP produces data that corrects documented biases in radiosonde humidity measurements. Unique fields contained within this datastream include smoothed original relative humidity, dry bias corrected relative humidity, and final corrected relative humidity. The smoothed RH field refines the relative humidity from integers - the resolution of the instrument - to fractions of a percent. This profile is then used to calculate the dry bias corrected field. The final correction fixes a time-lag problem and uses the dry-bias field as input into the algorithm. In addition to dry bias, solar heating is another correction that is encompassed in the final corrected relative humidity field. Additional corrections were made to soundings at the extended facility sites (S0*) as necessary: Corrected erroneous surface elevation (and up through rest of height of sounding), for S03, S04 and S05. Corrected erroneous surface pressure at Chanute (S02).

On Quality Control Procedures Being Adopted for TRMM LBA and KWAJEX Soundings Data Sets

NASA Technical Reports Server (NTRS)

Roy, B.; Halverson, Jeffrey B.; Starr, David OC. (Technical Monitor)

2001-01-01

During NASA's Tropical Rainfall Measuring Mission (TRMM) field campaigns Large Scale Biosphere Atmosphere (LBA) held in Amazonia (Brazil) in the period January- February, 1999, and the Kwajalein Experiment (KWAJEX) held in the Republic of Marshall Islands in the period between August-September, 1999, extensive radiosonde observations (raob) were collected using VIZ and Vaisala sondes which have different response characteristics. In all, 320 raob for LBA and 972 fixed raob for KWAJEX have been obtained and are being processed. Most atmospheric sensible heat source (Q1) and apparent moisture sink (Q2) budget studies are based on sounding data, and the accuracy of the raob is important especially in regions of deep moist convection. A data quality control (QC) project has been initiated at GSFC by the principal investigator (JBH), and this paper addresses some of the quantitative findings for the level I and II QC procedures. Based on these quantitative assessment of sensor (or system) biases associated with each type of sonde, the initial data repair work will be started. Evidence of moisture biases between the two different sondes (VIZ and Vaisala) has been shown earlier by Halverson et al. (2000). Vaisala humidity sensors are found to have a low-level dry bias in the boundary layer, whereas above 600 mb the VIZ sensor tends to register a dryer atmosphere. All raob data were subjected to a limit check based on an algorithm already well tested for the raob data obtained during the Tropical Ocean Global Atmosphere (TOGA-COARE).

Techniques for analyses of trends in GRUAN data

NASA Astrophysics Data System (ADS)

Bodeker, G. E.; Kremser, S.

2015-04-01

The Global Climate Observing System (GCOS) Reference Upper Air Network (GRUAN) provides reference quality RS92 radiosonde measurements of temperature, pressure and humidity. A key attribute of reference quality measurements, and hence GRUAN data, is that each datum has a well characterized and traceable estimate of the measurement uncertainty. The long-term homogeneity of the measurement records, and their well characterized uncertainties, make these data suitable for reliably detecting changes in global and regional climate on decadal time scales. Considerable effort is invested in GRUAN operations to (i) describe and analyse all sources of measurement uncertainty to the extent possible, (ii) quantify and synthesize the contribution of each source of uncertainty to the total measurement uncertainty, and (iii) verify that the evaluated net uncertainty is within the required target uncertainty. However, if the climate science community is not sufficiently well informed on how to capitalize on this added value, the significant investment in estimating meaningful measurement uncertainties is largely wasted. This paper presents and discusses the techniques that will need to be employed to reliably quantify long-term trends in GRUAN data records. A pedagogical approach is taken whereby numerical recipes for key parts of the trend analysis process are explored. The paper discusses the construction of linear least squares regression models for trend analysis, boot-strapping approaches to determine uncertainties in trends, dealing with the combined effects of autocorrelation in the data and measurement uncertainties in calculating the uncertainty on trends, best practice for determining seasonality in trends, how to deal with co-linear basis functions, and interpreting derived trends. Synthetic data sets are used to demonstrate these concepts which are then applied to a first analysis of temperature trends in RS92 radiosonde upper air soundings at the GRUAN site at

Techniques for analyses of trends in GRUAN data

NASA Astrophysics Data System (ADS)

Bodeker, G. E.; Kremser, S.

2014-12-01

The Global Climate Observing System (GCOS) Reference Upper Air Network (GRUAN) provides reference quality RS92 radiosonde measurements of temperature, pressure and humidity. A key attribute of reference quality measurements, and hence GRUAN data, is that each datum has a well characterised and traceable estimate of the measurement uncertainty. The long-term homogeneity of the measurement records, and their well characterised uncertainties, make these data suitable for reliably detecting changes in global and regional climate on decadal time scales. Considerable effort is invested in GRUAN operations to (i) describe and analyse all sources of measurement uncertainty to the extent possible, (ii) quantify and synthesize the contribution of each source of uncertainty to the total measurement uncertainty, and (iii) verify that the evaluated net uncertainty is within the required target uncertainty. However, if the climate science community is not sufficiently well informed on how to capitalize on this added value, the significant investment in estimating meaningful measurement uncertainties is largely wasted. This paper presents and discusses the techniques that will need to be employed to reliably quantify long-term trends in GRUAN data records. A pedagogical approach is taken whereby numerical recipes for key parts of the trend analysis process are explored. The paper discusses the construction of linear least squares regression models for trend analysis, boot-strapping approaches to determine uncertainties in trends, dealing with the combined effects of autocorrelation in the data and measurement uncertainties in calculating the uncertainty on trends, best practice for determining seasonality in trends, how to deal with co-linear basis functions, and interpreting derived trends. Synthetic data sets are used to demonstrate these concepts which are then applied to a first analysis of temperature trends in RS92 radiosonde upper air soundings at the GRUAN site at

Design for green, disposable, mini radiosondes to track fluctuations along isopycnic surfaces in cloud environments

NASA Astrophysics Data System (ADS)

Basso, Tessa Chiara; Iovieno, Michele; Bertoldo, Silvano; Perotto, Giovanni; Athanassiou, Athanassia; Canavero, Flavio; Perona, Giovanni; Tordella, Daniela

2017-11-01

An introduction to innovative, bio-compatible, ultralight, disposable radiosondes that are aimed to be passively transported on isopycnic surfaces in cloud and clear air environments. Their goal is to track small-scale fluctuations of velocity, temperature, humidity, acceleration and pressure for several hours within and outside the cloud boundary. With a target weight of 15 g, the volume is chosen such that the probes float on isopycnic surfaces at constant altitudes from 1000 to 3000 m. They are filled with helium gas to obtain a buoyancy force equal to the weight of the system. Transmitters within the probes will send data to receivers on Earth to be analysed and compared with numerical simulations. To minimise their environmental impact, it is foreseen that the disposable radiosondes be made with biodegradable smart materials which keep the desired hydrophobicity and flexibility. These environmentally friendly, hydrophobic balloons will provide an insight into the unsteady life cycle of warm clouds over land, ocean and alpine environments. These explorative observations will contribute to the current understanding of microphysical processes in clouds with the purpose of improving weather prediction and climate modelling.

Association between vitamin D concentration and levels of sex hormones in an elderly Polish population with different genotypes of VDR polymorphisms (rs10735810, rs1544410, rs7975232, rs731236).

PubMed

Laczmanski, Lukasz; Lwow, Felicja; Mossakowska, Malgorzata; Puzianowska-Kuznicka, Monika; Szwed, Małgorzata; Kolackov, Katarzyna; Krzyzanowska-Swiniarska, Barbara; Bar-Andziak, Ewa; Chudek, Jerzy; Sloka, Natalia; Milewicz, Andrzej

2015-03-15

Vitamin D co-regulates the synthesis of sex hormones in part by interaction with its nuclear receptor. The aim of this study was to determine whether there is an association of vitamin D concentration vs the level of sex hormones in elderly Polish individuals with different genotypes of the vitamin D receptor (VDR) gene. Rs10735810, rs1544410, rs7975232, and rs731236 polymorphisms of VDR, the serum sex hormone level, free estrogen index (FEI) and free androgen index (FAI) as well as vitamin D, were evaluated in 766 persons (362 women and 404 men) selected from 5695 Polish population, aged 65-90years from the PolSenior survey. We observed that women with GG (rs731236), TT (rs7975232), BB (rs1544410) and FF (rs10735810) genotypes were characterized by a significant correlation between vitamin D vs testosterone concentration and FAI value. We found a significant correlation between testosterone level and FAI vs vitamin D concentration in men with heterozygote AG in the rs731236 polymorphism and in the GG (rs7975232), the BB (rs1544410), and the Ff (rs10735810) genotypes. In elderly selected Polish population with different genotypes of VDR polymorphisms, a statistically significant relationship between vitamin D concentration vs testosterone level was observed. Copyright © 2015 Elsevier B.V. All rights reserved.

Association of ITPA polymorphisms rs6051702/rs1127354 instead of rs7270101/rs1127354 as predictor of ribavirin-associated anemia in chronic hepatitis C treated patients.

PubMed

D'Avolio, Antonio; De Nicolò, Amedeo; Cusato, Jessica; Ciancio, Alessia; Boglione, Lucio; Strona, Silvia; Cariti, Giuseppe; Troshina, Giulia; Caviglia, Gian Paolo; Smedile, Antonina; Rizzetto, Mario; Di Perri, Giovanni

2013-10-01

Functional variants rs7270101 and rs1127354 of inosine triphosphatase (ITPA) were recently found to protect against ribavirin (RBV)-induced hemolytic anemia. However, no definitive data are yet available on the role of no functional rs6051702 polymorphism. Since a simultaneous evaluation of the three ITPA SNPs for hemolytic anemia has not yet been investigated, we aimed to understand the contribution of each SNPs and its potential clinical use to predict anemia in HCV treated patients. A retrospective analysis included 379 HCV treated patients. The ITPA variants rs6051702, rs7270101 and rs1127354 were genotyped and tested for association with achieving anemia at week 4. We also investigated, using multivariate logistic regression, the impact of each single and paired associated polymorphism on anemia onset. All SNPs were associated with Hb decrease. The carrier of at least one variant allele in the functional ITPA SNPs was associated with a lower decrement of Hb, as compared to patients without a variant allele. In multivariate logistic regression analyses the carrier of a variant allele in the rs6051702/rs1127354 association (OR=0.11, p=1.75×10(-5)) and Hb at baseline (OR=1.51, p=1.21×10(-4)) were independently associated with protection against clinically significant anemia at week 4. All ITPA polymorphisms considered were shown to be significantly associated with anemia onset. A multivariate regression model based on ITPA genetic polymorphisms was developed for predicting the risk of anemia. Considering the characterization of pre-therapy anemia predictors, rs6051702 SNP in association to rs1127354 is more informative in order to avoid this relevant adverse event. Copyright © 2013 Elsevier B.V. All rights reserved.

Large 0/12 GMT Differences of US Vaisala RS80 Observations

NASA Technical Reports Server (NTRS)

Atlas, Robert (Technical Monitor)

2002-01-01

Large differences been observations taken at 0 and 12 GMT have been revealed during routine monitoring of observations at the Data Assimilation Office (DAO) at NASA's Goddard Space Flight Center (GSFC). As a result, an investigation has been conducted to confirm the large differences and isolate its source. The data clearly shows that 0/12 GMT differences are largely artificial especially over the central US and that the differences largely originate in the post processing software at the observing stations. In particular, the release time of the rawinsonde balloon may be misspecified to be the synoptic time which would lead to the miscalculation of the bias correction that accounts for solar radiation effects on the thermistor.

Retrieving Arctic Sea Fog Geometrical Thickness and Inversion Characteristics from Surface and Radiosonde Observations.

NASA Astrophysics Data System (ADS)

Gilson, Gaëlle; Jiskoot, Hester

2017-04-01

Arctic sea fog hasn't been extensively studied despite its importance for environmental impact such as on traffic safety and on glacier ablation in coastal Arctic regions. Understanding fog processes can improve nowcasting of environmental impact in such remote regions where few observational data exist. To understand fog's physical, macrophysical and radiative properties, it is important to determine accurate Arctic fog climatology. Our previous study suggested that fog peaks in July over East Greenland and associates with sea ice break-up and a sea breeze with wind speeds between 1-4 m/s. The goal of this study is to understand Arctic coastal fog macrophysical properties and quantify its vertical extent. Radiosonde profiles were extracted from the Integrated Global Radiosonde Archive (IGRA) between 1980-2012, coincident with manual and automated fog observations at three synoptic weather stations along the coast of East Greenland. A new method using air mass saturation ratio and thermodynamic stability was developed to derive fog top height from IGRA radiosonde profiles. Soundings were classified into nine categories, based on surface and low-level saturation ratio, inversion type, and the fog top height relative to the inversion base. Results show that Arctic coastal fog mainly occurs under thermodynamically stable conditions characterized by deep and strong low-level inversions. Fog thickness is commonly about 100-400 m, often reaching the top of the boundary layer. Fog top height is greater at northern stations, where daily fog duration is also longer and often lasts throughout the day. Fog thickness is likely correlated to sea ice concentration density during sea ice break-up. Overall, it is hypothesized that our sounding classes represent development or dissipation stages of advection fog, or stratus lowering and fog lifting processes. With a new automated method, it is planned to retrieve fog height from IGRA data over Arctic terrain around the entire North

Intercomparisons of radiosondes and an airborne refractometer for measuring radio ducts

NASA Astrophysics Data System (ADS)

Morrissey, J. F.; Izumi, Y.; Cote, O. R.

1986-07-01

The capabilities of two types of radiosondes and an aircraft refractometer to measure radio ducting conditions were compared in a series of flights in September 1985 at Chatham, Mass., on Cape Cod. The tests were part of a program studying radio propagation on Air Force communication links. The intercomparisons were made between data from a refractometer mounted on a small single engine aircraft (Cessna 172) and data from an operational National Weather Service synoptic sounding system. The synoptic sonde and the portable sonde were often on the same balloon train. The comparisons show that the aircraft refractometer data indicate the highest number of ducts and the synoptic data the least number of ducts.

Lack of association between rheumatoid arthritis and genetic variants rs10889677, rs11209026 and rs2201841 of IL-23R gene.

PubMed

Paradowska-Gorycka, Agnieszka; Malinowski, Damian; Haladyj, Ewa; Olesinska, Marzena; Safranow, Krzysztof; Pawlik, Andrzej

2018-01-19

Rheumatoid arthritis (RA) is an autoimmune diseases, where different genetic variants in cytokine genes may play a pathogenic role. A GWAS in autoimmune diseases highlighted the IL-23R gene as a one of the susceptibility factors. We examined three candidate single nucleotide polymorphisms (SNPs) rs10889677, rs11209026 and rs2201841 of the IL-23R gene, as well as determined their possible association with RA in a Polish population. The IL-23R gene polymorphisms were genotyped for 422 RA patients and 348 healthy individuals using TaqMan SNP genotyping assay. The genotypes frequency did not deviate from HWE in each examined group. A comparison of the allele as well as genotype frequencies of the IL-23R polymorphisms under codominant, dominant and recessive genetic model revealed no significant differences between RA patients and healthy subjects. We also demonstrated that IL-23R rs2201841 and rs11209026 as well as rs11209026 and rs10889677 were in complete linkage disequilibrium (D'=1.0). Our genotype-phenotype analysis demonstrated that in carriers of rs10889677C and/or rs2201841A allele the RF, extra-articular manifestations and erosion were more frequent present than in patients with rs10889677A and/or rs2201841A allele, although this association was not significant. Present findings indicated that the autoimmune disease-associated genetic variants in IL-23R gene are not associated with RA in the Polish population. Copyright © 2017 Elsevier España, S.L.U. All rights reserved.

50 CFR 92.13-92.19 - [Reserved

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 6 2010-10-01 2010-10-01 false [Reserved] 92.13-92.19 Section 92.13-92.19 Wildlife and Fisheries UNITED STATES FISH AND WILDLIFE SERVICE, DEPARTMENT OF THE INTERIOR (CONTINUED) MISCELLANEOUS PROVISIONS MIGRATORY BIRD SUBSISTENCE HARVEST IN ALASKA Program Structure §§ 92.13-92.19 [Reserved] ...

50 CFR 92.13-92.19 - [Reserved

Code of Federal Regulations, 2011 CFR

2011-10-01

... 50 Wildlife and Fisheries 8 2011-10-01 2011-10-01 false [Reserved] 92.13-92.19 Section 92.13-92.19 Wildlife and Fisheries UNITED STATES FISH AND WILDLIFE SERVICE, DEPARTMENT OF THE INTERIOR (CONTINUED) MISCELLANEOUS PROVISIONS MIGRATORY BIRD SUBSISTENCE HARVEST IN ALASKA Program Structure §§ 92.13-92.19 [Reserved] ...

50 CFR 92.7-92.9 - [Reserved

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 6 2010-10-01 2010-10-01 false [Reserved] 92.7-92.9 Section 92.7-92.9 Wildlife and Fisheries UNITED STATES FISH AND WILDLIFE SERVICE, DEPARTMENT OF THE INTERIOR (CONTINUED) MISCELLANEOUS PROVISIONS MIGRATORY BIRD SUBSISTENCE HARVEST IN ALASKA General Provisions §§ 92.7-92.9 [Reserved] ...

50 CFR 92.7-92.9 - [Reserved

Code of Federal Regulations, 2011 CFR

2011-10-01

... 50 Wildlife and Fisheries 8 2011-10-01 2011-10-01 false [Reserved] 92.7-92.9 Section 92.7-92.9 Wildlife and Fisheries UNITED STATES FISH AND WILDLIFE SERVICE, DEPARTMENT OF THE INTERIOR (CONTINUED) MISCELLANEOUS PROVISIONS MIGRATORY BIRD SUBSISTENCE HARVEST IN ALASKA General Provisions §§ 92.7-92.9 [Reserved] ...

IRF4 rs12203592 functional variant and melanoma survival.

PubMed

Potrony, Miriam; Rebollo-Morell, Aida; Giménez-Xavier, Pol; Zimmer, Lisa; Puig-Butille, Joan Anton; Tell-Marti, Gemma; Sucker, Antje; Badenas, Celia; Carrera, Cristina; Malvehy, Josep; Schadendorf, Dirk; Puig, Susana

2017-04-15

Inherited genetic factors may modulate clinical outcome in melanoma. Some low-to-medium risk genes in melanoma susceptibility play a role in melanoma outcome. Our aim was to assess the role of the functional IRF4 SNP rs12203592 in melanoma prognosis in two independent sets (Barcelona, N = 493 and Essen, N = 438). Genotype association analyses showed that the IRF4 rs12203592 T allele increased the risk of dying from melanoma in both sets (Barcelona: odds ratio [OR] = 6.53, 95% CI 1.38-30.87, Adj p = 0.032; Essen: OR = 1.68, 95% CI 1.04-2.72, Adj p = 0.035). Survival analyses only showed significance for the Barcelona set (hazard ratio = 4.58, 95% CI 1.11-18.92, Adj p = 0.036). This SNP was also associated with tumour localization, increasing the risk of developing melanoma in head or neck (OR = 1.79, 95% CI 1.07-2.98, Adj p = 0.032) and protecting from developing melanoma in the trunk (OR = 0.59, 95% CI 0.41-0.85, Adj p = 0.004). These findings suggest for the first time that IRF4 rs12203592 plays a role in the modulation of melanoma outcome and confirms its contribution to the localization of the primary tumour. © 2017 UICC.

A family study of DRD3 rs6280, SLC1A2 rs3794087 and MAPT rs1052553 variants in essential tremor.

PubMed

Jiménez-Jiménez, Félix Javier; García-Martín, Elena; Alonso-Navarro, Hortensia; Lorenzo-Betancor, Oswaldo; Ortega-Cubero, Sara; Pastor, Pau; Calleja, Marisol; Agúndez, José A G

2016-10-01

Despite many data suggesting a role of genetic factors in the risk for essential tremor (ET), the responsible genes have not been identified. We analyzed in ET Spanish families three single nucleotide polymorphisms (SNPs): DRD3 rs6280, SLC1A2 rs3794087, and MAPT rs1052553) previously related to an increased risk for developing the disease. We recruited 45 subjects with ET and 13 subjects without tremor belonging to 11 families who were evaluated because of familial tremor. Diagnosis of probable or definite ET was done according to TRIG criteria. Genotyping of the 3 SNPs was done using TaqMan-based qPCR assays. Data were compared with those of healthy controls of our laboratory. Family-based association testing for disease traits was performed as well. rs6280 and rs3794087 genotype and allelic frequencies did not differ significantly between subjects with ET and healthy controls. However, rs1052553AA genotype and the allele rs1052553A allele were significantly more frequent among ET patients. rs1052553A allele was non-significantly overrepresented in ET patients compared with controls when considering only the more severely affected member of each ET family. Family-based association test for disease traits showed lack of association between ET and the three SNPs studied. Our results showed a lack of association between rs6280 and rs3794087 with the risk for ET, though a marginal increased risk for ET was observed among the rs1052553A allele carriers, which was not confirmed with a family-based association study.

GPS Radiosonde with Spread-Spectrum Transmitter for Aerial dE/dt Studies

NASA Astrophysics Data System (ADS)

Sonnenfeld, R.; John, B. D.; William, W. P.; Aulich, G.; Ken, E.

2003-12-01

Inexpensive, low-power and reliable telemetry is a continuous struggle for those engaged in developing balloon-borne instruments for atmospheric electric studies. Several custom designs, by NCAR and others, have enabled much useful work in radiosondes. Also, packet radio technology has been used with great success. Easily obtainable packet radios are currently limited to 9600 baud. In search of higher baud rates that integrate well with microprocessor-based data acquisition systems, we have tested a new commercial off-the-shelf spread-spectrum transmitter. The transmitter operates in the 900 MHz industrial, scientific and medical (ISM) band with a transmit power of 100 mW. The transmitter (a Maxstream XC09-019NST) is used with a dedicated receiver, such that the data to be transmitted is fed via RS-232C protocols to the transmitter, and received as a text string via a serial port on the receiver. We did tests at raw baud rates of 9600 and 19200 (roughly 1000-2000 characters/second). Initial range tests required integrating the transmitter with a GPS and sending the NMEA-position-string (National Marine Electronics Assoc.) to a ground-based receiver. In ground-based tests, we repeatedly saw that a clear line-of-sight between transmitter and receiver was required for successful telemetry. The maximum range obtained during ground tests was 15.3 km at 9600 baud. Initial balloon tests results were, as hoped, more encouraging than ground-based tests. The maximum range (ground distance and altitude) of any balloon transmission was 58.0 km in fair-weather with excellent line-of-sight visibility. Our highest altitude transmission was 28.6 km absolute altitude (25.3 km altitude relative to launch point). These numbers were determined from the GPS coordinates transmitted. Antenna alignment and acceptance angle effects were observed in our received data. For these reasons, the full data rate of 19200 baud was only obtained out to 10 km, and then again around 45-58 km

A Radiosonde Using a Humidity Sensor Array with a Platinum Resistance Heater and Multi-Sensor Data Fusion

PubMed Central

Shi, Yunbo; Luo, Yi; Zhao, Wenjie; Shang, Chunxue; Wang, Yadong; Chen, Yinsheng

2013-01-01

This paper describes the design and implementation of a radiosonde which can measure the meteorological temperature, humidity, pressure, and other atmospheric data. The system is composed of a CPU, microwave module, temperature sensor, pressure sensor and humidity sensor array. In order to effectively solve the humidity sensor condensation problem due to the low temperatures in the high altitude environment, a capacitive humidity sensor including four humidity sensors to collect meteorological humidity and a platinum resistance heater was developed using micro-electro-mechanical-system (MEMS) technology. A platinum resistance wire with 99.999% purity and 0.023 mm in diameter was used to obtain the meteorological temperature. A multi-sensor data fusion technique was applied to process the atmospheric data. Static and dynamic experimental results show that the designed humidity sensor with platinum resistance heater can effectively tackle the sensor condensation problem, shorten response times and enhance sensitivity. The humidity sensor array can improve measurement accuracy and obtain a reliable initial meteorological humidity data, while the multi-sensor data fusion technique eliminates the uncertainty in the measurement. The radiosonde can accurately reflect the meteorological changes. PMID:23857263

A radiosonde using a humidity sensor array with a platinum resistance heater and multi-sensor data fusion.

PubMed

Shi, Yunbo; Luo, Yi; Zhao, Wenjie; Shang, Chunxue; Wang, Yadong; Chen, Yinsheng

2013-07-12

This paper describes the design and implementation of a radiosonde which can measure the meteorological temperature, humidity, pressure, and other atmospheric data. The system is composed of a CPU, microwave module, temperature sensor, pressure sensor and humidity sensor array. In order to effectively solve the humidity sensor condensation problem due to the low temperatures in the high altitude environment, a capacitive humidity sensor including four humidity sensors to collect meteorological humidity and a platinum resistance heater was developed using micro-electro-mechanical-system (MEMS) technology. A platinum resistance wire with 99.999% purity and 0.023 mm in diameter was used to obtain the meteorological temperature. A multi-sensor data fusion technique was applied to process the atmospheric data. Static and dynamic experimental results show that the designed humidity sensor with platinum resistance heater can effectively tackle the sensor condensation problem, shorten response times and enhance sensitivity. The humidity sensor array can improve measurement accuracy and obtain a reliable initial meteorological humidity data, while the multi-sensor data fusion technique eliminates the uncertainty in the measurement. The radiosonde can accurately reflect the meteorological changes.

Allelic clustering and ancestry-dependent frequencies of rs6232, rs6234, and rs6235 PCSK1 SNPs in a Northern Ontario population sample.

PubMed

Sirois, Francine; Kaefer, Nadine; Currie, Krista A; Chrétien, Michel; Nkongolo, Kabwe K; Mbikay, Majambu

2012-10-01

The PCSK1 (proprotein convertase subtilisin/kexin type 1) locus encodes proprotein convertase 1/3, an endoprotease that converts prohormones and proneuropeptides to their active forms. Spontaneous loss-of-function mutations in the coding sequence of its gene have been linked to obesity in humans. Minor alleles of two common non-synonymous single-nucleotide polymorphisms (SNPs), rs6232 (T > C, N221D) and rs6235 (C > G, S690T), have been associated with increased risk of obesity in European populations. In this study, we compared the frequencies of the rs6232 and rs6234 (G > C, Q665E) SNPs in Aboriginal and Caucasian populations of Northern Ontario. The two SNPs were all relatively less frequent in Aboriginals: The minor allele frequency of the rs6232 SNP was 0.01 in Aboriginals and 0.08 in Caucasians (P < 4.10(-6)); for the rs6234 SNP, it was 0.20 and 0.32, respectively (P < 0.001). Resequencing revealed that the rs6234 SNP variation was tightly linked to that of the rs6235 SNP, as previously reported. Most interestingly, all carriers of the rs6232 SNP variation also carried the rs6234/rs6235 SNP clustered variations, but not the reverse, suggesting the former occurred later on an allele already carrying the latter. These data indicate that, in Northern Ontario Aboriginals, the triple-variant PCSK1 allele is relatively rare and might be of lesser significance for obesity risk in this population.

Neoplastic MiR-17~92 deregulation at a DNA fragility motif (SIDD).

PubMed

Schneider, Björn; Nagel, Stefan; Ehrentraut, Stefan; Kaufmann, Maren; Meyer, Corinna; Geffers, Robert; Drexler, Hans G; MacLeod, Roderick A F

2012-03-01

Chromosomal or mutational activation of BCL6 (at 3q27) typifies diffuse large B-cell lymphoma (DLBCL) which in the germinal center subtype may be accompanied by focal amplification of chromosome band 13q31 effecting upregulation of miR-17~92. Using long distance inverse-polymerase chain reaction, we mapped and sequenced six breakpoints of a complex BCL6 rearrangement t(3;13)(q27;q31)t(12;13)(p11;q31) in DLBCL cells, which places miR-17~92 antisense within the resulting ITPR2-BCL6 chimeric fusion gene rearrangement. MiR-17~92 members were upregulated ~15-fold over controls in a copy number independent manner consistent with structural deregulation. MIR17HG and ITPR2-BCL6 were, despite their close configuration, independently expressed, discounting antisense regulation. MIR17HG in t(3;13)t(12;13) cells proved highly responsive to treatment with histone deacetylase inhibitors implicating epigenetic deregulation, consistent with which increased histone-H3 acetylation was detected by chromatin immunoprecipitation near the upstream MIR17HG breakpoint. Remarkably, 5/6 DNA breaks in the t(3;13)t(12;13) precisely cut at stress-induced DNA duplex destabilization (SIDD) peaks reminiscent of chromosomal fragile sites, while the sixth lay 150 bp distant. Extended SIDD profiling showed that additional oncomiRs also map to SIDD peaks. Fluorescence in situ hybridization analysis showed that 11 of 52 (21%) leukemia-lymphoma (L-L) cell lines with 13q31 involvement bore structural rearrangements at/near MIR17HG associated with upregulation. As well as fueling genome instability, SIDD peaks mark regulatory nuclear-scaffold matrix attachment regions open to nucleosomal acetylation. Collectively, our data indict a specific DNA instability motif (SIDD) in chromosome rearrangement, specifically alterations activating miR-17~92 epigenetically via promoter hyperacetylation, and supply a model for the clustering of oncomiRs near cancer breakpoints. Copyright © 2011 Wiley-Liss, Inc.

Forward Model Studies of Water Vapor Using Scanning Microwave Radiometers, Global Positioning System, and Radiosondes during the Cloudiness Intercomparison Experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mattioli, Vinia; Westwater, Ed R.; Gutman, S.

2005-05-01

Brightness temperatures computed from five absorption models and radiosonde observations were analyzed by comparing them with measurements from three microwave radiometers at 23.8 and 31.4 GHz. Data were obtained during the Cloudiness Inter-Comparison experiment at the U.S. Department of Energy's Atmospheric Radiation Measurement Program's (ARM) site in North-Central Oklahoma in 2003. The radiometers were calibrated using two procedures, the so-called instantaneous ?tipcal? method and an automatic self-calibration algorithm. Measurements from the radiometers were in agreement, with less than a 0.4-K difference during clear skies, when the instantaneous method was applied. Brightness temperatures from the radiometer and the radiosonde showed anmore » agreement of less than 0.55 K when the most recent absorption models were considered. Precipitable water vapor (PWV) computed from the radiometers were also compared to the PWV derived from a Global Positioning System station that operates at the ARM site. The instruments agree to within 0.1 cm in PWV retrieval.« less

Association of FTO rs9939609 with Obesity.

PubMed

Yasri, Sora; Wiwanitkit, Viroj

2018-05-30

Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity

Materials (Subjects) and Methods

Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity

Results:

Association of FTO rs9939609 with Obesity

Conclusion:

Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity Association of FTO rs9939609 with Obesity. ©2018The Author(s). Published by S. Karger AG, Basel.

Observations of frontal zone structures with a VHF Doppler radar and radiosondes, part 1.2A

NASA Technical Reports Server (NTRS)

Larsen, M. F.; Rottger, J.

1984-01-01

The SOUSY-VHF-Radar is a pulsed coherent radar operating at 53.5 MHz and located near Bad Lauterbert, West Germany. Since 1977, the facility, operated by the Max-Planck-Institut fur Aeronomie, has been used to make a series of frontal passage observations in the spring and fall. Experiments in winter have been difficult because part of the transmitting and receiving array is usually covered by snow during that part of the year. Wavelengths around 6 m are known to be sensitive to the vertical temperature structure of the atmosphere (GREEN and GAGE, 1980; RASTOGI and ROTTGER, 1982). Thus, it has been possible to use radars operating at frequencies near 500 MHz to locate the tropopause. Comparisons between radar data and radiosonde data have shown that there is a large gradient in the radar reflectivity at the height where the radiosonde tropopause occurs. An experiment carried out by ROTTGER (1979) on March 15 to 16, 1977, showed that the radar's sensitivity to the vertical temperature structure could also be used to locate the position of fronts. The SOUSY-VHF-Radar consists of a transmitting array, also used for receiving in some configurations, that can be scanned in the off-vertical direction but not at sufficiently low elevation angles to study the horizontal extent of structures.

Intraseasonal to interannual variability of Kelvin wave momentum fluxes as derived from high-resolution radiosonde data

DOE PAGES

Sjoberg, Jeremiah P.; Birner, Thomas; Johnson, Richard H.

2017-07-26

Observational estimates of Kelvin wave momentum fluxes in the tropical lower stratosphere remain challenging. Here we extend a method based on linear wave theory to estimate daily time series of these momentum fluxes from high-resolution radiosonde data. Daily time series are produced for sounding sites operated by the US Department of Energy (DOE) and from the recent Dynamics of the Madden–Julian Oscillation (DYNAMO) field campaign. Our momentum flux estimates are found to be robust to different data sources and processing and in quantitative agreement with estimates from prior studies. Testing the sensitivity to vertical resolution, our estimated momentum fluxes aremore » found to be most sensitive to vertical resolution greater than 1 km, largely due to overestimation of the vertical wavelength. Climatological analysis is performed over a selected 11-year span of data from DOE Atmospheric Radiation Measurement (ARM) radiosonde sites. Analyses of this 11-year span of data reveal the expected seasonal cycle of momentum flux maxima in boreal winter and minima in boreal summer, and variability associated with the quasi-biennial oscillation of maxima during easterly phase and minima during westerly phase. Comparison between periods with active convection that is either strongly or weakly associated with the Madden–Julian Oscillation (MJO) suggests that the MJO provides a nontrivial increase in the lowermost stratospheric momentum fluxes.« less

Radiosonde and satellite observations of topographic flow off the Norwegian coast

NASA Astrophysics Data System (ADS)

Rugaard Furevik, Birgitte; Dagestad, Knut-Frode; Olafsson, Haraldur

2015-04-01

Winds in Norway are strongly affected by the complex topography and in some areas the average wind speed in the fjords may exceed those on the coast. Such effects are revealed through a statistical analysis derived wind speed from ~8500 Synthetic Aperture Radar (SAR) scenes covering the Norwegian coast. We have compared the results with modelled winds from the operational atmosphere model at MET (horizontal grid spacing of 2.5km) and 3 years of measurements from "M/S Trollfjord", a ferry traversing a 2400km coastal route between the cities Bergen and Kirkenes. The analysis reveals many coastal details of the wind field not observed from the meteorological station network of Norway. The data set proves useful for verification of offshore winds in the model. High temporal resolution radiosonde winds from two locations are used to analyse the topographic effects.

Statistics of optical and geometrical properties of cirrus cloud over tibetan plateau measured by lidar and radiosonde

NASA Astrophysics Data System (ADS)

Dai, Guangyao; Wu, Songhua; Song, Xiaoquan; Zhai, Xiaochun

2018-04-01

Cirrus clouds affect the energy budget and hydrological cycle of the earth's atmosphere. The Tibetan Plateau (TP) plays a significant role in the global and regional climate. Optical and geometrical properties of cirrus clouds in the TP were measured in July-August 2014 by lidar and radiosonde. The statistics and temperature dependences of the corresponding properties are analyzed. The cirrus cloud formations are discussed with respect to temperature deviation and dynamic processes.

Global, Hemispheric, and Zonal Temperature Deviations Derived From a 63-Station Radiosonde Network

DOE Data Explorer

Angell, J. K. [NOAA, Air Resources Laboratory

2011-01-01

Surface temperatures and thickness-derived temperatures from a 63-station, globally distributed radiosonde network have been used to estimate global, hemispheric, and zonal annual and seasonal temperature deviations. Most of the temperature values used were column-mean temperatures, obtained from the differences in height (thickness) between constant-pressure surfaces at individual radiosonde stations. The pressure-height data before 1980 were obtained from published values in Monthly Climatic Data for the World. Between 1980 and 1990, Angell used data from both the Climatic Data for the World and the Global Telecommunications System (GTS) Network received at the National Meteorological Center. Between 1990 and 1995, the data were obtained only from GTS, and since 1995 the data have been obtained from National Center for Atmospheric Research files. The data are evaluated as deviations from the mean based on the interval 1958-1977. The station deviations have been averaged (with equal weighting) to obtain annual and seasonal temperature deviations for the globe, the Northern and Southern Hemispheres, and the following latitudinal zones: North (60° N-90° N) and South (60° S-90° S) Polar; North (30° N-60° N) and South (30° S-60° S) Temperate; North (10° N-30° N) and South (10° S-30° S) Subtropical; Tropical(30° S-30° N); and Equatorial (10° S-10° N). The seasonal calculations are for the standard meteorological seasons (i.e., winter is defined as December, January, and February; spring is March, April, and May, etc.) and the annual calculations are for December through the following November (i.e., for the four meteorological seasons). For greater details, see Angell and Korshover (1983) and Angell (1988, 1991)

Polymorphisms in Four Genes (KCNQ1 rs151290, KLF14 rs972283, GCKR rs780094 and MTNR1B rs10830963) and Their Correlation with Type 2 Diabetes Mellitus in Han Chinese in Henan Province, China

PubMed Central

Gao, Kaiping; Wang, Jinjin; Li, Linlin; Zhai, Yujia; Ren, Yongcheng; You, Haifei; Wang, Bingyuan; Wu, Xuli; Li, Jianna; Liu, Zichen; Li, Xiong; Huang, Yaxin; Luo, Xin-Ping; Hu, Dongsheng; Ohno, Kinji; Wang, Chongjian

2016-01-01

Genetic variants at KCNQ1 rs151290, KLF14 rs972283, GCKR rs780094 and MTNR1B rs10830963 have been associated with type 2 diabetes mellitus (T2DM), but the results are contradictory in Chinese populations. The aim of the present study was to investigate the association of these four SNPs with T2DM in a large population of Han Chinese at Henan province, China. Seven-hundred-thirty-six patients with T2DM (cases) and Seven-hundred-sixty-eight healthy glucose-tolerant controls were genotyped for KCNQ1 rs151290, KLF14 rs972283, GCKR rs780094 and MTNR1B rs10830963. The association of genetic variants in these four genes with T2DM was analyzed using multivariate logistic regression. Genotypes and allele distributions of KCNQ1 rs151290 were significantly different between the cases and controls (p < 0.05). The AC and CC genotypes and the combined AC + CC genotype of rs151290 in KCNQ1 were associated with increases risk of T2DM before (OR = 1.482, 95% CI = 1.062–2.069; p = 0.021; OR = 1.544, 95% CI = 1.097–2.172, p = 0.013; and OR = 1.509, 95% CI = 1.097–2.077, p = 0.011, respectively) and after (OR = 1.539, 95% CI = 1.015–2.332, p = 0.042; OR = 1.641, 95% CI = 1.070–2.516, p = 0.023; and OR = 1.582, 95% CI = 1.061–2.358, p = 0.024; respectively) adjustment for sex, age, anthropometric measurements, biochemical indexes, smoking and alcohol consumption. Consistent with results of genotype analysis, the C allele of rs151290 in KCNQ1 was also associated with increased risk of T2DM (OR = 1.166, 95% CI = 1.004–1.355, p = 0.045). No associations between genetic variants of KLF14 rs972283, GCKR rs780094 or MTNR1B rs10830963 and T2DM were detected. The AC and CC genotypes and the C allele of rs151290 in KCNQ1 may be risk factors for T2DM in Han Chinese in Henan province. PMID:26927145

Polymorphisms in Four Genes (KCNQ1 rs151290, KLF14 rs972283, GCKR rs780094 and MTNR1B rs10830963) and Their Correlation with Type 2 Diabetes Mellitus in Han Chinese in Henan Province, China.

PubMed

Gao, Kaiping; Wang, Jinjin; Li, Linlin; Zhai, Yujia; Ren, Yongcheng; You, Haifei; Wang, Bingyuan; Wu, Xuli; Li, Jianna; Liu, Zichen; Li, Xiong; Huang, Yaxin; Luo, Xin-Ping; Hu, Dongsheng; Ohno, Kinji; Wang, Chongjian

2016-02-26

Genetic variants at KCNQ1 rs151290, KLF14 rs972283, GCKR rs780094 and MTNR1B rs10830963 have been associated with type 2 diabetes mellitus (T2DM), but the results are contradictory in Chinese populations. The aim of the present study was to investigate the association of these four SNPs with T2DM in a large population of Han Chinese at Henan province, China. Seven-hundred-thirty-six patients with T2DM (cases) and Seven-hundred-sixty-eight healthy glucose-tolerant controls were genotyped for KCNQ1 rs151290, KLF14 rs972283, GCKR rs780094 and MTNR1B rs10830963. The association of genetic variants in these four genes with T2DM was analyzed using multivariate logistic regression. Genotypes and allele distributions of KCNQ1 rs151290 were significantly different between the cases and controls (p < 0.05). The AC and CC genotypes and the combined AC + CC genotype of rs151290 in KCNQ1 were associated with increases risk of T2DM before (OR = 1.482, 95% CI = 1.062-2.069; p = 0.021; OR = 1.544, 95% CI = 1.097-2.172, p = 0.013; and OR = 1.509, 95% CI = 1.097-2.077, p = 0.011, respectively) and after (OR = 1.539, 95% CI = 1.015-2.332, p = 0.042; OR = 1.641, 95% CI = 1.070-2.516, p = 0.023; and OR = 1.582, 95% CI = 1.061-2.358, p = 0.024; respectively) adjustment for sex, age, anthropometric measurements, biochemical indexes, smoking and alcohol consumption. Consistent with results of genotype analysis, the C allele of rs151290 in KCNQ1 was also associated with increased risk of T2DM (OR = 1.166, 95% CI = 1.004-1.355, p = 0.045). No associations between genetic variants of KLF14 rs972283, GCKR rs780094 or MTNR1B rs10830963 and T2DM were detected. The AC and CC genotypes and the C allele of rs151290 in KCNQ1 may be risk factors for T2DM in Han Chinese in Henan province.

The CLU gene rs11136000 variant is significantly associated with Alzheimer's disease in Caucasian and Asian populations.

PubMed

Liu, Guiyou; Wang, Haiyang; Liu, Jiafeng; Li, Jingbo; Li, Hali; Ma, Guoda; Jiang, Yongshuai; Chen, Zugen; Zhao, Bin; Li, Keshen

2014-03-01

Large-scale genomewide association studies have reported that the CLU rs11136000 polymorphism is significantly associated with Alzheimer's disease (AD) in people of Caucasian ancestry. Recently, this association was investigated in Asian populations (Chinese, Japanese, and Korean). However, these studies reported either a weak association or no association between the rs11136000 polymorphism and AD. We believe that this discrepancy may be caused by the relatively small sample size of the previous studies and the genetic heterogeneity of the rs11136000 polymorphism in AD among different populations. For this study, we searched the PubMed and AlzGene databases. We selected 18 independent studies (6 studies of Asian populations and 12 of populations of Caucasian ancestry) that evaluated the association between the rs11136000 polymorphism and AD using a case-control experimental design. We evaluated the genetic heterogeneity of the rs11136000 polymorphism in Caucasian and Asian populations. We then investigated the rs11136000 polymorphism by a meta-analysis in Asian populations using allele, dominant, and recessive models. We identified a significant association between rs11136000 and AD with the allele model (P = 2.00 × 10(-4)) and the dominant model (P = 5.00 × 10(-3)). Meanwhile, a similar genetic risk of the rs11136000 polymorphism in AD was observed in Asian and Caucasian populations. Further meta-analysis in pooled Asian and Caucasian populations indicated a more significant association with the allele (P = 8.30 × 10(-24)), dominant (P = 4.46 × 10(-17)), and recessive (P = 3.92 × 10(-12)) models. Collectively, our findings from this meta-analysis indicate that the effect of the CLU rs11136000 polymorphism on AD risk in Asian cohorts (Chinese, Japanese, and Korean) is consistent with the protective effect observed in Caucasian AD cohorts.

Temporal evolution of the planetary boundary layer over Athens, Greece - Statistical analysis based on coincident lidar and radiosonde data in the frame of EARLINET (2002-2012)

NASA Astrophysics Data System (ADS)

Kokkalis, Panos; Papayannis, Alex; Tsaknakis, George; Mamouri, RodElise

2013-04-01

The focus of this paper is to study the temporal evolution of the Planetary Boundary Layer (PBL) height over the basin of the megacity of Athens, Greece for a 10-years period: 2002-2012. This study is based on a statistical analysis of PBL heights derived from coincident laser remote sensing (lidar) and radiosonde data, obtained in the frame of the European Aerosol Research Lidar network (EARLINET). To this end, the systematically obtained data (in terms of the lidar signals) by the EOLE Raman-elastic lidar system of the Laser Remote Sensing Unit (LRSU) of the National Technical University of Athens (NTUA), in conjunction with the radiosonde data obtained by the Hellenic National Meteorological Service (HNMS), have been statistically analyzed. The NTUA EOLE lidar system is able to provide the vertical aerosol backscatter (at 355, 532, 1064 nm), aerosol extinction (at 355 and 532 nm), as well as water vapor mixing ratio profiles, from about 700 m up to 10000 m, with high temporal (< 5 min.) and spatial (7.5 m) resolution. The calculation of the first and second derivative of the Range-Corrected Lidar Signal (RCLS) permits the calculation of the PBL height, with a spatial resolution of about 15-30 m, in the range height 700-10000 m, respectively. Radiosonde data are collected daily by HNMS radiosoundings at midnight (00:00 UTC) and midday (12:00 UTC) at the site of Hellenikon, approximately 10 km SW from the NTUA lidar station. The atmospheric parameters calculated from the radiosonde data to provide the PBL height are the potential temperature and the Richardson number. Our data analysis was based on hourly-averaged lidar RCLS measurements, obtained in a time window starting 30 min before and ending 30 minutes after the radiosounding launching time. A good correlation coefficient value (R2 > 0.8) between the aforementioned lidar - radiosonde dataset ensured the accurate derivation of the PBL height. A statistical analysis based on the spatial and temporal variation

LEP rs7799039, LEPR rs1137101, and ADIPOQ rs2241766 and 1501299 Polymorphisms Are Associated With Obesity and Chemotherapy Response in Mexican Women With Breast Cancer.

PubMed

Méndez-Hernández, Alejandra; Gallegos-Arreola, Martha Patricia; Moreno-Macías, Hortensia; Espinosa Fematt, Jorge; Pérez-Morales, Rebeca

2017-10-01

Obesity plays a major role in the pathogenesis of breast cancer. Leptin (LEP) and adiponectin (ADIPOQ) are important in the regulation of adipose tissue. The response to cancer treatment depends on the histological and molecular tumor type, clinical stage, and genetic variability that might promote carcinogenic development. The aim of this study was to investigate the association between overweight/obesity and polymorphisms in the LEP (rs7799039), LEP receptor (LEPR; rs1137101), and ADIPOQ genes (rs2241766, rs1501299) with the response to breast cancer treatment in Mexican women. A sample of 177 patients with primary breast cancer (stage I-III) and who received neoadjuvant therapy were included. Polymorphisms were genotyped and their serum LEP concentrations (n = 59) were quantified. The patients' median age was 53.1 years, the frequency of overweight and obesity was 57 and 84 patients, respectively, 117 were postmenopausal, and 64 of the patients did not respond to chemotherapy. An association of the LEP rs7799039, LEPR rs1137101, and ADIPOQ rs1501299 polymorphisms with overweight/obesity was found. The patients who did not respond to treatment were more frequently obese, at clinical stage III, had metastases, and high levels of glucose. Moreover, in samples that were positive for estrogen receptor, higher levels of LEP were found, and in wild type genotypes for LEP rs7799039 and LEPR rs1137101. There was a direct association between the polymorphisms in LEP rs7799039 and ADIPOQ rs1501299 with overweight/obesity, and these genotypes affected the response to chemotherapeutic treatment, suggesting that an obesogenic microenvironment is more favorable for tumoral progression. Copyright © 2017 Elsevier Inc. All rights reserved.

Pharmacological and immunochemical characterization of α2* nicotinic acetylcholine receptors (nAChRs) in mouse brain

PubMed Central

Whiteaker, Paul; Wilking, Jennifer A; Brown, Robert WB; Brennan, Robert J; Collins, Allan C; Lindstrom, Jon M; Boulter, Jim

2009-01-01

Aim: α2 nAChR subunit mRNA expression in mice is most intense in the olfactory bulbs and interpeduncular nucleus. We aimed to investigate the properties of α2* nAChRs in these mouse brain regions. Methods: α2 nAChR subunit-null mutant mice were engineered. Pharmacological and immunoprecipitation studies were used to determine the composition of α2 subunit-containing (α2*) nAChRs in these two regions. Results: [125I]Epibatidine (200 pmol/L) autoradiography and saturation binding demonstrated that α2 deletion reduces nAChR expression in both olfactory bulbs and interpeduncular nucleus (by 4.8±1.7 and 92±26 fmol̇mg-1 protein, respectively). Pharmacological characterization using the β2-selective drug A85380 to inhibit [125I]epibatidine binding proved inconclusive, so immunoprecipitation methods were used to further characterize α2* nAChRs. Protocols were established to immunoprecipitate β2 and β4 nAChRs. Immunoprecipitation specificity was ascertained using tissue from β2- and β4-null mutant mice, and efficacy was good (>90% of β2* and >80% of β4* nAChRs were routinely recovered). Conclusion: Immunoprecipitation experiments indicated that interpeduncular nucleus α2* nAChRs predominantly contain β2 subunits, while those in olfactory bulbs contain mainly β4 subunits. In addition, the immunoprecipitation evidence indicated that both nuclei, but especially the interpeduncular nucleus, express nAChR complexes containing both β2 and β4 subunits. PMID:19498420

Tropopause inversion layer: Seasonal and latitudinal variations and representation in standard radiosonde data and global models

NASA Astrophysics Data System (ADS)

Bell, Shaun W.; Geller, Marvin A.

2008-03-01

Previous publications have given information on the seasonal and latitudinal variations of the tropopause inversion layer (TIL), as seen in high-resolution radiosonde data sets, when soundings are averaged using the tropopause as a reference level. This paper presents a more quantitative analysis of the latitudinal and seasonal structure of the TIL than has been given previously. To do this, we define the region over which the static stability relaxes from its overshoot value at the tropopause to its local minimum in the stratosphere. This region is seen to increase monotonically in thickness from about 1 km at low latitudes to about 4 to 5 km at high latitudes. When the seasons are defined as winter (DJF), spring (MAM), summer (JJA), and fall (SON), the transition from tropical behavior occurs a little poleward of 20°N in both DJF and MAM and moves to a little poleward of 30°N in JJA and SON. Somewhat surprisingly, it is also shown that almost identical information about the TIL can be derived from standard radiosonde data for our period of analysis because of their reporting of the tropopause and other "significant levels," but caution needs to be used in doing this since the number of reported significant levels has varied significantly over the long term and with some distinct discontinuities. Finally, we discuss what sort of information on the TIL can be obtained from global models given their relatively coarse vertical resolution.

Association between ACE (rs4646994), FABP2 (rs1799883), MTHFR (rs1801133), FTO (rs9939609) Genes Polymorphism and Type 2 Diabetes with Dyslipidemia.

PubMed

Raza, Syed Tasleem; Abbas, Shania; Siddiqi, Zeba; Mahdi, Farzana

2017-01-01

Diabetic dyslipidemia is one of the leading causes of coronary artery disease (CAD) death. Genetic and environmental factors play an important role in the development of type 2 diabetes mellitus (T2DM) and dyslipidemia. The present study was aimed to investigate the association of ACE (rs4646994), FABP2 (rs1799883), MTHFR (rs1801133) and FTO (rs9939609) genes polymorphism in T2DM with dyslipidemia. Totally, 559 subjects including 221 T2DM cases with dyslipidemia, 158 T2DM without dyslipidemia and 180 controls were enrolled. ACE genes polymorphism was evaluated by polymerase chain reaction (PCR), while MTHFR , FABP2 , FTO genes polymorphisms were evaluated by PCR and restriction fragment length polymorphism (RFLP). Significant association of ACE and MTHFR genes polymorphisms were found in both group of cases [T2DM with dyslipidemia (P<0.001, and P=0.008, respectively) and T2DM without dyslipidemia (P=0.003, and P=0.010, respectively)] while FABP2 and FTO genes polymorphisms were significantly associated with T2DM without dyslipidemia (P=0.038, and P= 0.019, respectively). This study concludes that ACE , FABP2 , FTO and MTHFR genes are associated with T2DM. Additionally, it also seems that ACE and MTHFR genes might be further associated with the development of dyslipidemia in T2DM cases.

Cloud Detection Using Measured and Modeled State Parameters

NASA Technical Reports Server (NTRS)

Yi, Y.; Minnis, P.; Huang, J.; Ayers, J. K.; Doelling, D. R.; Khaiyer, M. M.; Nordeen, M. L.

2004-01-01

In this study, hourly RUC analyses were used to examine the differences between RH and temperature values from RUC reanalysis data and from radiosonde atmospheric profiles obtained at the ARM SCF. The results show that the temperature observations from the SONDE and RUC are highly correlated. The RHs are also well-correlated, but the SONDE values generally exceed those from RUC. Inside cloud layers, the RH from RUC is 2-14% lower than the RH from SONDE for all RUC layers. Although the layer mean RH within clouds is much greater than the layer mean RH outside cloud or in the clear-sky, RH thresholds chosen as a function of temperature can more accurately diagnose cloud occurrence for either dataset. For overcast clouds, it was found that the 50% probability RH threshold for diagnosing a cloud, within a given upper tropospheric layer is roughly 90% for the Vaisala RS80-15LH radisonde and 80% for RUC data. While for the partial cloud (cloud amount is less than 90%), the RH thresholds of SONDE are close to RUC for a given probability in upper tropospheric layers. The probabilities of detecting clouds at a given RH and temperature should be useful for a variety of application such as the development of new cloud parameterizations or for estimating the vertical profile of cloudiness underneath a given cloud observed from the satellite to construct a 3-D cloud data set for computing atmospheric radiative heating profiles or determining potential aircraft icing conditions.

Association of rs7903146, rs12255372, and rs290487 polymorphisms in TCF7L2 gene with type 2 diabetes in an Iranian Kurdish ethnic group.

PubMed

Shokouhi, Shabnam; Delpisheh, Ali; Haghani, Karimeh; Mahdizadeh, Mohsen; Bakhtiyari, Salar

2014-01-01

Single nucleotide polymorphisms (SNPs) within the transcription factor 7-like 2 (TCF7L2) gene are well known risk variants for type 2 diabetes mellitus (T2DM). The association between TCF7L2 SNPs and T2DM has been investigated in several studies, but the results are controversial. In this study, we investigated whether the rs7903146, rs12255372, and rs290487 polymorphisms of TCF7L2 are associated with T2DM per se or metabolic traits related to this disease in a Kurdish ethnic group of Iran. In all, 173 patients with T2DM and 173 normoglycemic subjects were included in this study. All subjects were genotyped using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). Genotypic and allelic frequencies were then analyzed in each group. Serum lipids, fasting glucose, fasting serum insulin, HOMA-IR, and HbA1c levels were determined by conventional methods. T-allele and genotype frequencies of rs7903146, rs12255372, and rs290487 were significantly different between T2DM and control subjects. The CT genotype (OR = 1.98, p = 0.008), TT genotype (OR = 3.54, p = 0.024), and the dominant model (OR = 2.16, p = 0.002) of rs7903146 were associated with T2DM. The GT genotype (OR = 2.23, p = 0.005), TT genotype (OR = 4.25, p = 0.046), and the dominant model (OR = 2.2, p = 0.001) of rs12255372 gave a higher risk for T2DM. The carriers of CT genotype of rs290487 showed a significantly increased risk for T2DM (OR = 2.24, p = 0.003). Similarly, the dominant model of this SNP was found to be significantly associated with T2DM (OR = 2.25, p = 0.002). The control subjects carrying the T-allele of rs7903146 had higher levels of total cholesterol (CC; 4.52 +/- 1.03 vs. CT + TT; 5.00 +/- 1.2 mmol/L, p = 0.009) than those with CC genotype. Normoglycemic subjects carrying GT + TT genotypes of rs12255372 had a significantly higher WHR (GG; 0.90 +/- 0.059 vs. GT + TT; 0.93 +/- 0.07, p = 0.038) as compared with those with the GG genotype. The T-allele of rs12255372, rs

Comparison of shipborne GNSS-derived precipitable water vapor with radiosonde in the western North Pacific and in the seas adjacent to Japan

NASA Astrophysics Data System (ADS)

Shoji, Yoshinori; Sato, Kazutoshi; Yabuki, Masanori; Tsuda, Toshitaka

2017-11-01

We installed two global navigation satellite system (GNSS) antennas on a research vessel, the RYOFU MARU of the Japan Meteorological Agency, and conducted experimental observations to assess the GNSS-derived precipitable water vapor (PWV) from October 19, 2016, to August 6, 2017. One antenna was set on the mast (MAST), while another antenna was set on the upper deck (DECK). The GNSS analysis was conducted using the precise point positioning procedure with a real-time GNSS orbit. A quality control (QC) procedure based on the amount of zenith tropospheric delay (ZTD) time variation was proposed. After the QC was applied, the retrieved PWVs were compared to 77 radiosonde observations. The PWVs of MAST agreed with the radiosonde observations with a 1.7 mm root mean square (RMS) difference, a - 0.7-mm bias, and 3.6% rejection rate, while that of DECK showed a 3.2, - 0.8 mm, and 15.7%. The larger RMS and higher rejection rate of DECK imply a stronger multi-path effect on the deck. The differences in the GNSS PWV versus radiosonde observations were compared to the atmospheric delay, the estimated altitude of the GNSS antenna, the vessel's moving speed, the wind speed, and the wave height. The atmospheric delay and GNSS antenna altitude showed moderate correlation with the differences. The results suggest the kinematic PPP's potential for practical water vapor monitoring over oceans worldwide. At the same time, from the growing negative biases with the PWV value and with estimated antenna altitude, it could be inferred that the difficulty grows in separating the signal delay from the vertical coordinate under high-humidity conditions.[Figure not available: see fulltext.

Association of CHRNA4 gene rs1044396 and rs1044397 polymorphisms with Parkinson's disease symptoms and smoking.

PubMed

Zhang, L M; Zhang, X P; Chen, Y Q; Ye, W

2015-05-12

We assessed the CHRNA4 exon 5 rs1044396 and rs1044397 polymorphisms and investigated their relationship with Parkinson's disease (PD) severity and several non-motor symptoms. Ninety-seven patients with primary PD and 108 controls were recruited, and their smoking history identified. Patients with PD were assessed using the unified PD rating scale (UPDRS), Hoehn & Yahr (H&Y) grade, Hamilton depression rating scale (HAMD), visual analogue 10-points scale (VAS), and the Pittsburgh sleep quality index (PSQI). Polymerase chain reaction amplification and direct sequencing was performed on genomic DNA to identify polymorphic variants. Statistical analysis demonstrated that there were no gender differences in rs1044396(C→T) and rs1044397(G→A) frequencies. More smokers were identified among carriers of rs1044396 CT/TT genotypes. We also found no differences between PD and control groups in frequencies of either polymorphism. However, in women, PD onset was latest in rs1044397 GA/AA (P = 0.015). rs1044396 CT/TT genotype carriers and rs1044397 GG genotype patients with PD had higher VAS scores. No differences were found on the course of PD, H&Y grade, or UPDRS-II or -III scores between various genotypes, nor were differences found on scores of HAMD, nocturia, or PSQI in PD patients. Our results suggested that the CHRNA4 rs1044396 CT/TT genotype is related to cigarette smoking, that the rs1044397 polymorphism may associate with PD age of onset in women, and that rs1044396 and rs1044397 may relate to pain in PD patients, but not to the course or severity of disease, or to depression or nocturnal or sleeping disorders.

RS-25 engine

NASA Image and Video Library

2012-04-10

RS-25 series rocket engine No. 2059 is unloaded and positioned at Stennis Space Center on April 10, 2012, for future testing and use on NASA's new Space Launch System. The engine was the last of 15 RS-25 engines to be delivered from NASA's Kennedy Space Center in Florida to Stennis, where all will be stored until testing begins.

The effect of resistant starch (RS) on the bovine rumen microflora and isolation of RS-degrading bacteria.

PubMed

Jung, Dong-Hyun; Seo, Dong-Ho; Kim, Ga-Young; Nam, Young-Do; Song, Eun-Ji; Yoon, Shawn; Park, Cheon-Seok

2018-06-01

Resistant starch (RS) in the diet reaches the large intestine without degradation, where it is decomposed by the commensal microbiota. The fermentation of RS produces secondary metabolites including short-chain fatty acids (SCFAs), which have been linked to a variety of physiological and health effects. Therefore, the availability of RS as a prebiotic is a current issue. The objectives of this study were (1) to use metagenomics to observe microbial flora changes in Bos taurus coreanae rumen fluid in the presence of RS and (2) to isolate RS-degrading microorganisms. The major microbial genus in a general rumen fluid was Succiniclasticum sp., whereas Streptococcus sp. immediately predominated after the addition of RS into the culture medium and was then drastically replaced by Lactobacillus sp. The presence of Bifidobacterium sp. was also observed continuously. Several microorganisms with high RS granule-degrading activity were identified and isolated, including B. choerinum FMB-1 and B. pseudolongum FMB-2. B. choerinum FMB-1 showed the highest RS-hydrolyzing activity and degraded almost 60% of all substrates tested. Coculture experiments demonstrated that Lactobacillus brevis ATCC 14869, which was isolated from human feces, could grow using reducing sugars generated from RS by B. choerinum FMB-1. These results suggest that Bifidobacterium spp., especially B. choerinum FMB-1, are the putative primary degrader of RS in rumen microbial flora and could be further studied as probiotic candidates.

SHADOZ (Southern Hemisphere Additional Ozonesondes): A Tropical Ozonesonde-Radiosonde Network for the Atmospheric Community

NASA Technical Reports Server (NTRS)

Thompson, Anne M.; Witte, Jacquelyn C.; Oltmans, Samuel J.; Schmidlin, Francis J.

2003-01-01

A lack of sounding data has limited the accuracy of ozone satellite retrievals in the tropics and our understanding of chemical-dynamical interactions in a region strongly influenced by natural variability and anthropogenic activity. In 1998, NASA s Goddard Space Flight Center, NOAA's Climate Monitoring and Diagnostics Laboratory (CMDL) and a team of international sponsors established the SHADOZ (Southern Hemisphere ADditional OZonesondes) project to address the gap in tropical ozone soundings. SHADOZ augments launches at selected sites and provides a public archive of ozonesonde and radiosonde data from twelve tropical and subtropical stations at http://croc.gsfc.nasa.gov/shadoz. Instrumentation, data and a summary of the first scientific findings from SHADOZ are presented.

Micro Weather Station

NASA Technical Reports Server (NTRS)

Hoenk, Michael E.

1999-01-01

Improved in situ meteorological measurements in the troposphere and stratosphere are needed for studies of weather and climate, both as a primary data source and as validation for remote sensing instruments. Following the initial development and successful flight validation of the surface acoustic wave (SAW) hygrometer, the micro weather station program was directed toward the development of an integrated instrument, capable of accurate, in situ profiling of the troposphere, and small enough to fly on a radiosonde balloon for direct comparison with standard radiosondes. On April 23, 1998, working with Frank Schmidlin and Bob Olson of Wallops Island Flight Facility, we flew our instrument in a dual payload experiment, for validation and direct comparison with a Vaisala radiosonde. During that flight, the SAW dewpoint hygrometer measured frostpoint down to -76T at 44,000 feet. Using a laptop computer in radio contact with the balloon, we monitored data in real time, issued the cutdown command, and recovered the payload less than an hour after landing in White Sands Missile Range, 50 miles from the launch site in Hatch, New Mexico. Future flights will extend the intercomparison, and attempt to obtain in situ meteorological profiles from the surface through the tropopause. The SAW hygrometer was successfully deployed on the NASA DC8 as part of NASA's Third Convection and Moisture Experiment (CAMEX-3) during August and September, 1998. This field campaign was devoted to the study of hurricane tracking and intensification using NASA-funded aircraft. In situ humidity data from the SAW hygrometer are currently being analyzed and compared with data from other instruments on the DC8 and ER2 aircraft. Additional information is contained in the original.

RS3PE: Clinical and Research Development.

PubMed

Li, Hongbin; Altman, Roy D; Yao, Qingping

2015-08-01

Remitting seronegative symmetrical synovitis with pitting edema or RS3PE is a rare elderly-onset rheumatic syndrome. Although there are overlapping clinical manifestations between RS3PE, elderly-onset rheumatoid arthritis, and polymyalgia rheumatica, RS3PE has distinct characteristics. RS3PE can be associated with neoplasia and various rheumatic conditions, suggesting that it may be heterogeneous, and is considered as a paraneoplastic rheumatic disease. The pathogenesis of RS3PE may involve vascular endothelial growth factor and infection in RS3PE based upon limited data. Patients with RS3PE without concomitant malignancy respond well to small doses of glucocorticoids and carry good prognosis.

Comparison of Profiling Microwave Radiometer, Aircraft, and Radiosonde Measurements From the Alliance Icing Research Study (AIRS)

NASA Technical Reports Server (NTRS)

Reehorst, Andrew L.

2001-01-01

Measurements from a profiling microwave radiometer are compared to measurements from a research aircraft and radiosondes. Data compared is temperature, water vapor, and liquid water profiles. Data was gathered at the Alliance Icing Research Study (AIRS) at Mirabel Airport outside Montreal, Canada during December 1999 and January 2000. All radiometer measurements were found to lose accuracy when the radome was wet. When the radome was not wetted, the radiometer was seen to indicate an inverted distribution of liquid water within a cloud. When the radiometer measurements were made at 15 deg. instead of the standard zenith, the measurements were less accurate.

[MaRS Project

NASA Technical Reports Server (NTRS)

Aruljothi, Arunvenkatesh

2016-01-01

The Space Exploration Division of the Safety and Mission Assurances Directorate is responsible for reducing the risk to Human Space Flight Programs by providing system safety, reliability, and risk analysis. The Risk & Reliability Analysis branch plays a part in this by utilizing Probabilistic Risk Assessment (PRA) and Reliability and Maintainability (R&M) tools to identify possible types of failure and effective solutions. A continuous effort of this branch is MaRS, or Mass and Reliability System, a tool that was the focus of this internship. Future long duration space missions will have to find a balance between the mass and reliability of their spare parts. They will be unable take spares of everything and will have to determine what is most likely to require maintenance and spares. Currently there is no database that combines mass and reliability data of low level space-grade components. MaRS aims to be the first database to do this. The data in MaRS will be based on the hardware flown on the International Space Stations (ISS). The components on the ISS have a long history and are well documented, making them the perfect source. Currently, MaRS is a functioning excel workbook database; the backend is complete and only requires optimization. MaRS has been populated with all the assemblies and their components that are used on the ISS; the failures of these components are updated regularly. This project was a continuation on the efforts of previous intern groups. Once complete, R&M engineers working on future space flight missions will be able to quickly access failure and mass data on assemblies and components, allowing them to make important decisions and tradeoffs.

The association of rs4307059 and rs35678 markers with autism spectrum disorders is replicated in Italian families.

PubMed

Prandini, Paola; Pasquali, Alessandra; Malerba, Giovanni; Marostica, Andrea; Zusi, Chiara; Xumerle, Luciano; Muglia, Pierandrea; Da Ros, Lucio; Ratti, Emiliangelo; Trabetti, Elisabetta; Pignatti, Pier Franco

2012-08-01

The objective of this study was to replicate an association study on a newly collected Italian autism spectrum disorder (ASD) cohort by studying the genetic markers associated with ASDs from recent genome-wide and candidate gene association studies. We have genotyped 746 individuals from 227 families of the Italian Autism Network using allelic discrimination TaqMan assays for seven common single-nucleotide polymorphisms: rs2292813 (SLC25A12 gene), rs35678 (ATP2B2 gene), rs4307059 (between CDH9 and CDH10 genes), rs10513025 (between SEMA5A and TAS2R1 genes), rs6872664 (PITX1 gene), rs1861972 (EN2 gene), and rs4141463 (MACROD2 gene). A family-based association study was conducted. A significant association was found for two of seven markers: rs4307059 T allele (odds ratio: 1.758, SE=0.236; P-value=0.017) and rs35678 TC genotype (odds ratio: 0.528, SE=0.199; P-value=0.0013). A preferential allele transmission of two markers located at loci previously associated with social and verbal communication skill has been confirmed in patients of a new ASD family sample.

A 3' untranslated region polymorphism rs2304277 in the DNA repair pathway gene OGG1 is a novel risk modulator for urothelial bladder carcinoma.

PubMed

Ahmed, Tayyaba; Nawaz, Saira; Noreen, Rabia; Bangash, Kashif Sardar; Rauf, Abdur; Younis, Muhammad; Anwar, Khursheed; Khawaja, Muhammad Athar; Azam, Maleeha; Qureshi, Abid Ali; Akhter, Saeed; Kiemeney, Lambertus A; Qamar, Raheel; Ali, Syeda Hafiza Benish

2018-03-01

Altered DNA repair capacity may affect an individual's susceptibility to cancers due to compromised genomic integrity. This study was designed to elucidate the association of selected polymorphisms in DNA repair genes with urothelial bladder carcinoma (UBC). OGG1 rs1052133 and rs2304277, XRCC1 rs1799782 and rs25487, XRCC3 rs861539, XPC rs2228001, and XPD rs13181 were genotyped using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) in 200 UBC cases and 200 controls. We found association of OGG1 rs2304277 [odds ratio (OR) GG = 3.55, 95% confidence interval (CI) = 1.79-7.06] and XPC rs2228001 (OR AC = 2.38, 95% CI = 1.43-3.94) with UBC. In stratified analysis with respect to smoking status, OGG1 rs2304277 and XPC rs2228001 exhibited increased risk in smokers [(rs2304277 OR GG = 4.96, 95% CI = 1.51-16.30) (rs2228001 OR AC = 2.19, 95% CI = 1.02-4.72)] as well as nonsmokers [(rs2304277 OR GG = 2.95, 95% CI = 1.26-6.90) (rs2228001 OR AC = 2.57, 95% CI = 1.31-5.04)]. These polymorphisms were also associated with both low-grade [(rs2304277 OR GG = 3.73, 95% CI = 1.72-8.09) (rs2228001 OR AC = 2.18, 95% CI = 1.21-3.92)] and high-grade tumors [(rs2304277 OR GG = 3.45, 95% CI = 1.52-7.80) (rs2228001 OR AC = 2.81, 95% CI = 1.48-5.33)] as well as with non-muscle-invasive bladder cancer [(rs2304277 OR GG = 4.03, 95% CI = 1.87-8.67) (rs2228001 OR AC = 2.14, 95% CI = 1.20-3.81)] and muscle-invasive bladder cancer [(rs2304277 OR GG = 3.06, 95%CI = 1.31-7.13) (rs2228001 OR AC = 2.95, 95%CI = 1.51-5.75)]. This is the first study on DNA repair gene polymorphisms and UBC in the Pakistani population. It identifies OGG1 rs2304277 and replicates XPC rs2228001 as significant modulators of UBC susceptibility. © 2017 John Wiley & Sons Ltd/University College London.

Precision and Radiosonde Validation of Satellite Gridpoint Temperature Anomalies. Part II: A Tropospheric Retrieval and Trends during 1979-90.

NASA Astrophysics Data System (ADS)

Spencer, Roy W.; Christy, John R.

1992-08-01

TIROS-N satellite Microwave Sounding Unit (MSU) channel 2 data from different view angles across the MSU man swath are combined to remove the influence of the lower stratosphere and much of the upper troposphere on the measured brightness temperatures. The retrieval provides a sharper averaging kernel than the raw channel 2 weighting function, with a peak lowered from 50 kPa to 70 kPa and with only slightly more surface influence than raw channel 2. Monthly 2.5° gridpoint anomalies of this tropospheric retrieval compared between simultaneously operating satellites indicate close agreement, 0.15°C in the tropics to around 0.30°C over much of the higher latitudes. The agreement is not as close as with raw channel 2 anomalies because synoptic-scale temperature gradient information across the 2000-km swath of the MSU is lost in the retrieval procedure and because the retrieval involves the magnification of a small difference between two large numbers. Single gridpoint monthly anomaly correlations between the satellite measurements and the radiosonde calculations range from around 0.95 at high latitudes to below 0.8 in the tropical west Pacific, with standard errors of estimate of 0.16°C at Guam to around 0.50°C at high-latitude continental stations. Calculation of radiosonde temperature with a static weighting function instead of the radiative transfer equation degrades the standard errors by an average of less than 0.04°C. Of various standard tropospheric layers, the channel 2 retrieval anomalies correlate best with radiosonde 100-50- or 100-40-kPa-thickness anomalies. A comparison between global and hemispheric anomalies computed for raw channel 2 data versus the tropospheric retrieval show a correction in the 1979-90 time series for the volcano-induced stratospheric warming of 1982-83, which was independently observed by MSU channel 4. This correction leads to a slightly greater tropospheric warming trend in the 12-year time series (1979-90) for the

Global water vapor variability and trend from the latest 36 year (1979 to 2014) data of ECMWF and NCEP reanalyses, radiosonde, GPS, and microwave satellite

NASA Astrophysics Data System (ADS)

Chen, Biyan; Liu, Zhizhao

2016-10-01

The variability and trend in global precipitable water vapor (PWV) from 1979 to 2014 are analyzed using the PWV data sets from the ERA-Interim reanalysis of the European Centre for Medium-Range Weather Forecasts (ECMWF), reanalysis of the National Centers for Environmental Prediction (NCEP), radiosonde, Global Positioning System (GPS), and microwave satellite observations. PWV data from the ECMWF and NCEP have been evaluated by radiosonde, GPS, and microwave satellite observations, showing that ECMWF has higher accuracy than NCEP. Over the oceans, ECMWF has a much better agreement with the microwave satellite than NCEP. An upward trend in the global PWV is evident in all the five PWV data sets over three study periods: 1979-2014, 1992-2014, and 2000-2014. Positive global PWV trends, defined as percentage normalized by annual average, of 0.61 ± 0.33% decade-1, 0.57 ± 0.28% decade-1, and 0.17 ± 0.35% decade-1, have been derived from the NCEP, radiosonde, and ECMWF, respectively, for the period 1979-2014. It is found that ECMWF overestimates the PWV over the ocean prior to 1992. Thus, two more periods, 1992-2014 and 2000-2014, are studied. Increasing PWV trends are observed from all the five data sets in the two periods: 1992-2014 and 2000-2014. The linear relationship between PWV and surface temperature is positive over most oceans and the polar region. Steep positive/negative regression slopes are generally found in regions where large regional moisture flux divergence/convergence occurs.

Associations between Rs4244285 and Rs762551 gene polymorphisms and age-related macular degeneration.

PubMed

Stasiukonyte, Neringa; Liutkeviciene, Rasa; Vilkeviciute, Alvita; Banevicius, Mantas; Kriauciuniene, Loresa

2017-01-01

Age-related macular degeneration is the leading cause of blindness in elderly individuals in developed countries. The etiology and pathophysiology of age-related macular degeneration have not been elucidated yet. Knowing that the main pathological change of age-related macular degeneration is formation of drusen containing about 40% of lipids, there have been attempts to find associations between age-related macular degeneration and genes controlling lipid metabolism. To determine the frequency of CYP2C19 (G681A) Rs4244285 and CYP1A2 (-163C>A) Rs762551 genotypes in patients with age-related macular degeneration. The study enrolled 150 patients with early age-related macular degeneration and 296 age- and gender-matched healthy controls. The genotyping of Rs4244285 and Rs762551 was carried out by using the real-time polymerase chain reaction method. The CYP1A2 (-163C>A) Rs762551 C/C genotype was more frequently detected in patients with age-related macular degeneration than in the control group (32.7% vs. 21.6%, p = 0.011) and was associated with an increased risk of developing early age-related macular degeneration (OR = 1.759, 95% CI: 1.133-2.729; p = 0.012). The CYP1A2 (-163C>A) Rs762551 C/A genotype was more frequently documented in the control group compared with patients with age-related macular degeneration (46.3% vs. 30.7%, p = 0.002) and was associated with a decreased risk of having age-related macular degeneration (OR = 0.580. 95% CI: 0.362-0.929, p = 0.023) in the co-dominant model. The study showed that the CYP1A2 (-163C>A) Rs762551 C/C genotype was associated with an increased risk of age-related macular degeneration.

Cloud Properties under Different Synoptic Circulations: Comparison of Radiosonde and Ground-Based Active Remote Sensing Measurements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, Jinqiang; Li, Jun; Xia, Xiangao

In this study, long-term (10 years) radiosonde-based cloud data are compared with the ground-based active remote sensing product under six prevailing large-scale synoptic patterns, i.e., cyclonic center (CC), weak pressure pattern (WP), the southeast bottom of cyclonic center (CB), cold front (CF), anticyclone edge (AE) and anticyclone center (AC) over the Southern Great Plains (SGP) site. The synoptic patterns are generated by applying the self-organizing map weather classification method to the daily National Centers for Environmental Protection mean sea level pressure records from the North American Regional Reanalysis. It reveals that the large-scale synoptic circulations can strongly influence the regionalmore » cloud formation, and thereby have impact on the consistency of cloud retrievals from the radiosonde and ground-based cloud product. The total cloud cover at the SGP site is characterized by the least in AC and the most in CF. The minimum and maximum differences between the two cloud methods are 10.3% for CC and 13.3% for WP. Compared to the synoptic patterns characterized by scattered cloudy and clear skies (AE and AC), the agreement of collocated cloud boundaries between the two cloud approaches tends to be better under the synoptic patterns dominated by overcast and cloudy skies (CC, WP and CB). The rainy and windy weather conditions in CF synoptic pattern influence the consistency of the two cloud retrieval methods associated with the limited capabilities inherent to the instruments. As a result, the cloud thickness distribution from the two cloud datasets compares favorably with each other in all synoptic patterns, with relative discrepancy of ≤0.3 km.« less

Cloud Properties under Different Synoptic Circulations: Comparison of Radiosonde and Ground-Based Active Remote Sensing Measurements

DOE PAGES

Zhang, Jinqiang; Li, Jun; Xia, Xiangao; ...

2016-11-28

In this study, long-term (10 years) radiosonde-based cloud data are compared with the ground-based active remote sensing product under six prevailing large-scale synoptic patterns, i.e., cyclonic center (CC), weak pressure pattern (WP), the southeast bottom of cyclonic center (CB), cold front (CF), anticyclone edge (AE) and anticyclone center (AC) over the Southern Great Plains (SGP) site. The synoptic patterns are generated by applying the self-organizing map weather classification method to the daily National Centers for Environmental Protection mean sea level pressure records from the North American Regional Reanalysis. It reveals that the large-scale synoptic circulations can strongly influence the regionalmore » cloud formation, and thereby have impact on the consistency of cloud retrievals from the radiosonde and ground-based cloud product. The total cloud cover at the SGP site is characterized by the least in AC and the most in CF. The minimum and maximum differences between the two cloud methods are 10.3% for CC and 13.3% for WP. Compared to the synoptic patterns characterized by scattered cloudy and clear skies (AE and AC), the agreement of collocated cloud boundaries between the two cloud approaches tends to be better under the synoptic patterns dominated by overcast and cloudy skies (CC, WP and CB). The rainy and windy weather conditions in CF synoptic pattern influence the consistency of the two cloud retrieval methods associated with the limited capabilities inherent to the instruments. As a result, the cloud thickness distribution from the two cloud datasets compares favorably with each other in all synoptic patterns, with relative discrepancy of ≤0.3 km.« less

Consumption of retrograded (RS3) but not uncooked (RS2) resistant starch shifts nitrogen excretion from urine to feces in cannulated piglets.

PubMed

Heijnen, M L; Beynen, A C

1997-09-01

To study the effect of resistant starch (RS) on the route of nitrogen excretion, we fed three groups of six cannulated piglets each a diet containing either uncooked resistant starch (RS2 ), retrograded resistant starch (RS3 ) or glucose. The use of piglets with a cannula at the end of the ileum allowed measurement of the amount of nitrogen that entered the colon. Ileal digesta, urine and feces were collected quantitatively and weighed, and dry matter, starch and nitrogen content were determined. We hypothesized that RS2 would lower colonic absorption of nitrogen when compared with RS3 , because RS2 may be more fermentable than RS3 , thus trapping more nitrogen in bacteria. The piglets fed RS3 had a significantly higher production of ileal digesta and feces than the piglets fed glucose or RS2 . In the piglets fed RS2 , 44% of the amount of RS fed was recovered in the ileal digesta; in the piglets fed RS3 , 71% was recovered. Thus, more fermentable material entered the colon in the RS3 -fed piglets than in the RS2 -fed piglets. Virtually no starch was recovered in the feces of any dietary group. Replacement of glucose by either RS2 or RS3 did not affect nitrogen retention but increased fecal nitrogen excretion. Compared with glucose, RS3 but not RS2 reduced urinary nitrogen excretion, mainly in the form of urea, and reduced the amount of nitrogen absorbed by the colon when expressed as a percentage of the amount of nitrogen entering the colon. This study provides evidence that RS3 , but not RS2 , shifts nitrogen excretion from urine to feces in cannulated piglets.

Association between the three functional miR-146a single-nucleotide polymorphisms, rs2910164, rs57095329, and rs2431697, and autoimmune disease susceptibility: A meta-analysis.

PubMed

Park, Robin; Lee, Won Jin; Ji, Jong Dae

2016-11-01

Studies suggest associations between the miR-146a single nucleotide polymorphisms (SNPs) and susceptibility to autoimmune diseases. However, the results are inconsistent and inconclusive. Therefore, the aim of this study was to arrive at a conclusion about the association between the three functional miR-146a SNPs and autoimmune disease risk. Studies were identified through PubMed/MEDLINE searches for studies published up to January 2016 using as keywords rs2910164, rs57095329, rs2431697, and miR-146a polymorphisms. Thirty studies were included in the meta-analysis. The SNP rs2910164 G > C was found to be associated with increased risk of multiple sclerosis (CC + CG versus GG, OR = 1.25, 95% CI: 1.01-1.55), with decreased risks of psoriasis (C versus G, OR = 0.81, 95% CI: 0.69-0.96; CC versus GC + GG, OR = 0.73, 95% CI: 0.56-0.94), Behcet's disease (CC versus GC + GG, OR = 0.60, 95% CI: 0.50-0.73), asthma (C versus G, OR = 0.80, 95% CI: 0.69-0.93; CC versus GC + GG, OR = 0.65, 95% CI: 0.48-0.86), and uveitis (CC + CG versus GG, OR = 0.61, 95% CI: 0.49-0.77). The SNP rs2431697 C > T was found to be associated with an increased risk of SLE (T versus C, OR = 1.26, 95% CI: 1.15-1.38; TC + TT versus CC, OR = 1.28, 95% CI: 1.03-1.58; TT versus TC + CC, OR = 1.40, 95% CI: 1.21-1.62). The SNP rs57095329 A > G was found to be associated with an increased risk of SLE (G versus C, OR = 1.25, 95% CI: 1.17-1.35). The miR-146a SNPs rs2910164, rs57095329, rs2431697 are associated with susceptibility to certain autoimmune diseases. However, for other autoimmune diseases, they may be protective or insignificant.

LINGO1 rs9652490 and rs11856808 polymorphisms are not associated with risk for multiple sclerosis

PubMed Central

2013-01-01

Background Some recent experimental data suggest a possible role of LINGO-1 in the pathogenesis of multiple sclerosis (MS). In an attempt to identify genetic biomarkers related to MS susceptibility, we genotyped two common SNPs in the LINGO1 gene which have been associated to other neurological conditions, in patients with MS and in healthy subjects. These SNPs are linked to several SNPs within the LINGO1 gene, especially in individuals of Oriental or Caucasian descent. Methods We analyzed the allelic and genotype frequency of two LINGO1 variants (rs9652490 and rs11856808) in 293 patients with MS and 318 healthy controls, using KASPar assays. Results LINGO1 rs9652490 and rs11856808 allelic and genotype frequencies did not differ significantly between MS patients and controls. The minor allele frequencies for rs9652490 were 0.171 (95% CI = 0.140-0.201) and 0.167 (95% CI = 0.138-0.196 for cases and controls respectively (p = 0.853). For rs11856808 the minor allele frequencies were 0.317 (95% CI = 0.280-0.355) and 0.310 (95% CI = 0.274-0.346) for cases and controls, respectively (p = 0.773). Allele and genotype frequencies were unrelated with the age of onset of MS, gender, and clinical course of MS. In addition, haplotype analyses did not reveal any putative risk related to haplotypes. Conclusions These results suggest that LINGO1 rs9652490 and rs11856808 polymorphisms are not related with risk for MS. This study adds to other published evidence indicating that, to date, the LINGO1 SNPs studied here could be useful risk biomarkers of developing essential tremor, but not other movement disorders. PMID:23574883

LINGO1 and risk for essential tremor: results of a meta-analysis of rs9652490 and rs11856808.

PubMed

Jiménez-Jiménez, Félix Javier; García-Martín, Elena; Lorenzo-Betancor, Oswaldo; Pastor, Pau; Alonso-Navarro, Hortensia; Agúndez, José A G

2012-06-15

Recently, a genome-wide association study revealed a significant statistical association between LINGO1 rs9652490 and rs11856808 polymorphisms and the risk of developing essential tremor (ET) in Icelandic people. Because the results of further association studies were controversial, we conducted a meta-analysis including all the studies published on the risk of ET related with these polymorphisms. The metaanalysis included 11 association studies between LINGO1 rs9652490 (3972 ET patients, 20,714 controls) and 7 association studies between LINGO1 rs11856808, and risk for ET (2076 ET patients, 18,792 controls), and was carried out by using the software Meta-Disc 1.1.1 (http://www.hrc.es/investigacion/metadisc.html; Unit of Clinical Statistics, Hospital Ramón y Cajal, Madrid, Spain). Heterogeneity between studies in terms of degree of association was tested using the Q-statistic. Global diagnostic odds-ratios (ORs) and 95% confidence intervals (CI) for rs9652490 and rs11856808 of the total series were, respectively, 1.17 (1.00-1.36) (p=0.069) and 1.20 (1.05-1.36) (p=0.016). After excluding data on Icelandic people of the discovery series (that was responsible of a high degree of heterogeneity for rs9652490 polymorphism), the ORs and CI were 1.10 (0.97-1.26) (p=0.063) and 1.12 (0.99-1.27) (p=0.034). Global ORs and 95% CI for rs9652490 and rs11856808 of familial ET patients were, respectively, 1.27 (1.03-1.57) (p=0.014) and 1.21 (1.10-1.44) (p=0.031). The results of the meta-analysis suggest a relationship between LINGO1 rs11856808 polymorphism and the risk for ET and for familial ET, while rs9652490 polymorphism was only related with the risk for familial ET. Copyright © 2012 Elsevier B.V. All rights reserved.

Estimating the planetary boundary layer height from radiosonde and doppler lidar measurements in the city of São Paulo - Brazil

NASA Astrophysics Data System (ADS)

Marques, Márcia T. A.; Moreira, Gregori de A.; Pinero, Maciel; Oliveira, Amauri P.; Landulfo, Eduardo

2018-04-01

This study aims to compare the planetary boundary layer height (PBLH) values estimated by radiosonde data through the bulk Richardson number (BRN) method and by Doppler lidar measurements through the Carrier to Noise Ratio (CNR) method, which corresponds to the maximum of the variance of CNR profile. The measurement campaign was carried during the summer of 2015/2016 in the city of São Paulo. Despite the conceptual difference between these methods, the results show great agreement between them.

RS/1 in the Clinical Environment

PubMed Central

Kush, Thomas

1980-01-01

This paper describes the design of RS/1,™ the Research System, and its use in clinical patient studies. RS/1 is an interactive computer software system developed by the Medical Systems Group at BBN. Investigators and technicians who have never before used computers can learn RS/1 with a few hours of training. It uses familiar and intuitive concepts for data handling and data analysis, such as the “automated notebook” format of data storage, the direct use of graphs in curve-fitting, and a simple command language. Its versatility has made RS/1 useful in clinical research contexts, especially for studies involving patient care data.

Arctic warming, moisture increase and circulation changes observed in the Ny-Ålesund homogenized radiosonde record

NASA Astrophysics Data System (ADS)

Maturilli, Marion; Kayser, Markus

2017-10-01

Radiosonde measurements obtained at the Arctic site Ny-Ålesund (78.9°N, 11.9°E), Svalbard, from 1993 to 2014 have been homogenized accounting for instrumentation discontinuities by correcting known errors in the manufacturer provided profiles. The resulting homogenized radiosonde record is provided as supplementary material at http://doi.pangaea.de/10.1594/PANGAEA.845373. From the homogenized data record, the first Ny-Ålesund upper-air climatology of wind, temperature and humidity is presented, forming the background for the analysis of changes during the 22-year period. Particularly during the winter season, a strong increase in atmospheric temperature and humidity is observed, with a significant warming of the free troposphere in January and February up to 3 K per decade. This winter warming is even more pronounced in the boundary layer below 1 km, presumably amplified by mesoscale processes including e.g. orographic effects or the boundary layer capping inversion. Though the largest contribution to the increasing atmospheric water vapour column in winter originates from the lowermost 2 km, no increase in the contribution by specific humidity inversions is detected. Instead, we find an increase in the humidity content of the large-scale background humidity profiles. At the same time, the tropospheric flow in winter is found to occur less frequent from northerly directions and to the same amount more frequent from the South. We conclude that changes in the atmospheric circulation lead to an enhanced advection of warm and moist air from lower latitudes to the Svalbard region in the winter season, causing the warming and moistening of the atmospheric column above Ny-Ålesund, and link the observations to changes in the Arctic Oscillation.

Frequency of rs731236 (Taql), rs2228570 (Fok1) of Vitamin-D Receptor (VDR) gene in Emirati healthy population

PubMed Central

Osman, Enas; Al Anouti, Fatme; El ghazali, Gehad; Haq, Afrozul; Mirgani, Rajaa; Al Safar, Habiba

2015-01-01

Vitamin D is getting more attention everyday due to its importance in maintaining bone and calcium homeostasis, cellular proliferation, differentiation and immune response. Vitamin D is derived from diet or elicited in the skin by the activation of 7-dehydrocholesterol, which is an inert molecule that must be activated by ultraviolet light to form pre-vitamin D3. Recent studies connected the gene encoding for vitamin D (VDR) to the genetic control of bone mass and other diseases. As VDR SNPs have been associated with several disorders and diseases, it's important to investigate the allelic and genotypic distribution among populations. The aim of this study is to determine the frequency of rs731236 (Taq1) and rs2228570 (Fok1) variants in healthy Emirati individuals and compare their genotype and allele distribution with other populations. In this study 282 (female, 187; male, 95) unrelated healthy UAE nationals were involved. Two hundreds and eight two DNA samples been collected to genotype rs731236 (Taq1) and rs2228570 (Fok1) VDR SNPs. Our results indicate that the distribution of the alleles and genotypes of rs731236 (Taq1) and rs2228570 (Fok1) vary considerably in different populations. In the Emirati population the distribution of rs731236 (Taq1) and rs2228570 (Fok1) were AA 38%, AG 42%, GG 20% and AA 27%, AG 42%, GG 31% respectively. The Emirati population genotype and allele distribution of rs731236 (Taq1) and rs2228570 (Fok1) had no difference with Caucasians from USA and France. However, there was significant difference with Asian populations. PMID:26504744

Association of Adiponectin rs1501299 and rs266729 Gene Polymorphisms With Nonalcoholic Fatty Liver Disease

PubMed Central

Hashemi, Mohammad; Hanafi Bojd, Hamideh; Eskandari Nasab, Ebrahim; Bahari, Ali; Hashemzehi, Noor Allah; Shafieipour, Sara; Narouie, Behzad; Taheri, Mohsen; Ghavami, Saeid

2013-01-01

Background Genetic and environmental factors are important for the development of nonalcoholic fatty liver disease (NAFLD). Adiponectin is a white and brown adipose tissue hormone, and have been found to play essential roles in the regulation of energy homoeostasis. Recent reports have identified a possible role of adiponectin in NAFLD via PPARγ pathway. Objectives The present study was designed to find out the impact of adiponectin rs1501299 (276G/T) and rs266729 (-11377C/G) gene polymorphisms in NAFLD. Patients and Methods Eighty-three patients with diagnosis of NAFLD, and 93 healthy subjects were included in the study. Tetra ARMS-PCR was designed to detect single nucleotide polymorphisms. Results A significant difference was found between NAFLD and control group regarding the rs266729 polymorphism (χ2 = 7.35, P = 0.025). The rs266729 polymorphism increased the risk of NAFLD in codominant (CC vs. CG: OR = 2.18, 95% CI = 1.16 - 4.12, P = 0.016) and dominant (CC vs. CG/GG: OR = 2.31, 95% CI = 1.25 - 4.27; P = 0.008) inheritance tested models. The G allele increased the risk of NAFLD (OR = 1.63, 95% CI = 1.03 - 2.57, P = 0.037) in comparison with C allele. No significant difference was found between the groups concerning adiponectin rs1501299 gene polymorphism (χ2 = 0.70, P = 0.697). Conclusions adiponectin rs266729 polymorphism might be a candidate gene, which determines the susceptibility to NAFLD. Larger studies are necessary to confirm these findings in various populations. PMID:23922565

Optical resolution by preferential crystallization of (1RS,3RS)-1,2,3,4-tetrahydro-6,7-dihydroxy-1-methyl-3-isoquinolinecarboxylic acid.

PubMed

Shiraiwa, Tadashi; Kiyoe, Ryuuichi

2005-09-01

The racemic structure of (1RS,3RS)-1,2,3,4-tetrahydro-6,7-dihydroxy-1-methyl-3-isoquinolinecarboxylic acid [(1RS,3RS)-1] was examined based on the melting point, solubility, and IR spectrum, with the aim of optical resolution by preferential crystallization. (1RS,3RS)-1 was indicated from these results to exist as a conglomerate. The successive optical resolution by preferential crystallization of (1RS,3RS)-1 yielded (1S,3S)- and (1R,3R)-1 with optical purities of 85--95% at 66--81% degrees of resolution, which were fully purified by recrystallization.

The clinical spectrum of remitting seronegative symmetrical synovitis with pitting edema. The Catalán Group for the Study of RS3PE.

PubMed

Olivé, A; del Blanco, J; Pons, M; Vaquero, M; Tena, X

1997-02-01

To describe the clinical and laboratory features and outcome of patients with remitting seronegative symmetrical synovitis with pitting edema (RS3PE). A retrospective multicenter study of patients with RS3PE fulfilling the following criteria: (1) bilateral pitting edema of both hands, (2) sudden onset of polyarthritis, (3) age > 50 years, (4) seronegative for rheumatoid factor (RF). 27 patients with RS3PE were included, mean age 71.7 years (58-92), 18 men (66.6%) and 9 women (33.3%). Relevant history was noted in 2 patients with polymyalgia rheumatica. Main clinical features were polyarthritis and edema of both hands. Polyarthritis involved metacarpophalangeal joints in 22 patients (81.5%), proximal interphalangeal joints in 19 (70.4%), wrists in 15 (55.5%), shoulders in 13 (48%), elbows in 3 (11.1%), knees in 9 (33.3%), and ankles in 7 (25.9%). All patients were RF negative. Antinuclear antibodies were positive at low titer in 8 patients. Erosions were present in one patient. Two patients developed T lymphoma and one myelodysplastic syndrome. RS3PE is a heterogeneous syndrome the clinical history, presence of erosions, and evolution to hematological diseases in our patients suggest that RS3PE may not be a distinct clinical entity.

High resolution humidity, temperature and aerosol profiling with MeteoSwiss Raman lidar

NASA Astrophysics Data System (ADS)

Dinoev, Todor; Arshinov, Yuri; Bobrovnikov, Sergei; Serikov, Ilya; Calpini, Bertrand; van den Bergh, Hubert; Parlange, Marc B.; Simeonov, Valentin

2010-05-01

derive vertical profiles of aerosol backscatter ratio and aerosol extinction at 355 nm. Set of Stokes and anti-Stokes PRR lines are separated by the polychromator to derive temperature profiles. The humidity profiles have vertical resolution from 15 m (within the boundary layer) to 100-450 m (within the free troposphere), time resolution of 30 min and 5 km vertical range at daytime and 10 km at night-time. The aerosol backscatter ratio and extinction profiles have similar resolution with vertical range of approximately 10 km. The temperature profiles are derived from PRR lidar signals, simultaneously recorded in analog and photon counting mode, allowing vertical range of approximately 10 km. Vaisala RS-92 and Snow-White chilled mirror hygrometer radiosondes were used for calibration of the water vapor and temperature channels. Continuous temperature profiles were obtained and were coupled with the available water vapor mixing ratio profiles to obtain relative humidity time series. Lidar derived aerosol backscatter ratio profiles will be used for estimation of the boundary layer height and validation of NWP model results. Optical thickness time series are currently compared to independent measurements from a collocated sun photometer to assess the performance of the aerosol channel.

TERT Polymorphism rs2736100-C Is Associated with EGFR Mutation-Positive Non-Small Cell Lung Cancer

PubMed Central

Zheng, Yonglan; Niu, Xiaomin; Weng, Xiaoling; Zhang, Hong; Favus, Murray; Zhang, Lanjun; Jia, Weihua; Zeng, Yixin; Amos, Christopher I; Lu, Shun; Wang, Hui-Yun; Liu, Yun; Liu, Wanqing

2015-01-01

Purpose Epidermal growth factor receptor (EGFR) mutation-positive (EGFRmut+) non-small cell lung cancer (NSCLC) may be a unique orphan disease. Previous studies suggested that the telomerase reverse transcriptase (TERT) gene polymorphism is associated with demographic and clinical features strongly associated with EGFR mutations, e.g. adenocarcinoma histology, never-smoking history and female gender. We aim to test the association between TERT polymorphism and EGFRmut+ NSCLC. Experimental Design We conducted a genetic association study in Chinese NSCLC patients (n=714) and healthy controls (n=2,520), between the rs2736100 polymorphism and EGFRmut+ NSCLC. We further tested the association between the EGFR mutation status and mean leukocyte telomere length (LTL). The potential function of rs2736100 in lung epithelial cells was also explored. Results The rs2736100-C allele was significantly associated with EGFRmut+ NSCLC (OR=1.52, 95%CI=1.28–1.80, p=1.6×10−6) but not EGFRmut− NSCLC (OR=1.07, 95%CI=0.92–1.24, p=0.4). While NSCLC patients as a whole have significantly longer LTL compared to healthy controls (p≤10−13), the EGFRmut+ patients have even longer LTL compared to EGFRmut-patients (p=0.008). Meanwhile, rs2736100 was significantly associated with TERT mRNA expression in both normal and tumor lung tissues. All results remained significant after controlling for age, gender, smoking status and histology (p<0.05 for all tests). Moreover, the rs2736100 DNA sequence has an allele-specific affinity to nuclear proteins extracted from lung epithelial cells, which led to an altered enhancer activity of the sequence in vitro. Conclusion Our study suggests that telomerase and telomere function may be essential for carcinogenesis of EGFRmut+ NSCLC. Further investigation for the underlying mechanism is warranted. PMID:26149460

Estimate of Radiosonde Dry Bias From Far-Infrared Measurements on the Antarctic Plateau

NASA Astrophysics Data System (ADS)

Rizzi, R.; Maestri, T.; Arosio, C.

2018-03-01

The experimental data set of downwelling radiance spectra measured at the ground in clear conditions during 2013 by a Far-Infrared Fourier Transform Spectrometer at Dome-C, Antarctica, presented in Rizzi et al. (2016, https://doi.org/10.1002/2016JD025341) is used to estimate the effect of solar heating of the radiosonde humidity sensor, called dry bias. The effect is quite evident comparing residuals for the austral summer and winter clear cases and can be modeled by an increase of the water vapor concentration at all levels by about 15%. Such an estimate has become possible only after a new version of the simulation code and spectroscopic data has become available, which has substantially improved the modeling of water vapor absorption in the far infrared. The negative yearly spectral bias reported in Rizzi et al. (2016, https://doi.org/10.1002/2016JD025341) is in fact greatly reduced when compared to the same measurement data set.

Turbulence detection using radiosondes: plugging the gaps in the observation of turbulence

NASA Astrophysics Data System (ADS)

Marlton, Graeme; Harrison, Giles; Williams, Paul; Nicoll, Keri

2014-05-01

Turbulence costs the airline industry tens of millions of dollars each year, through damage to aircraft and injury to passengers. Clear-air turbulence (CAT) is particularly problematic, as it cannot be detected using remote sensing methods and we lack consistent observations to validate forecast models. Here we describe two specially adapted meteorological radiosondes that are used to measure turbulence. The first sensor consists of a Hall-effect magnetometer, which uses the Earth's magnetic field as a reference point, allowing the motion of the sonde to be measured. The second consists of an accelerometer that measures the accelerations the balloon encounters. A solar radiation sensor is mounted at the top of the package, to determine whether the sonde is in cloud. Results from multiple flights over Reading, UK in different conditions, show both sensors detecting turbulent regions near jet boundaries and above cloud tops, with the accelerometer recording values in excess of 6g in these regions. Case studies will show how these observations can be used to test the performance of a selection of empirical turbulence diagnostics initialised from ERA-interim data.

The NC3Rs gateway: Accelerating scientific discoveries with new 3Rs models and technologies.

PubMed

Percie du Sert, Nathalie; Robinson, Vicky

2018-01-01

This editorial introduces the NC3Rs gateway, which publishes articles and reviews on new models and technologies emerging from NC3Rs-funded research. The aim is to raise awareness about these approaches, increase confidence in their capability, and provide sufficient information to facilitate their uptake by others.

Search for RS-gravitons at CDF

DOE Office of Scientific and Technical Information (OSTI.GOV)

Strologas, John; /New Mexico U.

2011-09-01

We present a search for Randall-Sundrum (RS) gravitons decaying to diphotons or dielectrons or dimuons, performed with the CDF II detector and using up to 5.7 fb{sup -1} of integrated luminosity. The respective mass spectra are consistent with the ones expected by the standard model. For the RS-model parameter k/{bar M}{sub Pl} = 0.1, RS-gravitons with mass less than 1111 GeV/c{sup 2} are excluded at 95% CL.

Production of long-term global water vapor and liquid water data set using ultra-fast methods to assimilate multi-satellite and radiosonde observations

NASA Technical Reports Server (NTRS)

Vonderhaar, T. H.; Reinke, Donald L.; Randel, David L.; Stephens, Graeme L.; Combs, Cynthia L.; Greenwald, Thomas J.; Ringerud, Mark A.; Wittmeyer, Ian L.

1993-01-01

During the next decade, many programs and experiments under the Global Energy and Water Cycle Experiment (GEWEX) will utilize present day and future data sets to improve our understanding of the role of moisture in climate, and its interaction with other variables such as clouds and radiation. An important element of GEWEX will be the GEWEX Water Vapor Project (GVaP), which will eventually initiate a routine, real-time assimilation of the highest quality, global water vapor data sets including information gained from future data collection systems, both ground and space based. The comprehensive global water vapor data set being produced by METSAT Inc. uses a combination of ground-based radiosonde data, and infrared and microwave satellite retrievals. This data is needed to provide the desired foundation from which future GEWEX-related research, such as GVaP, can build. The first year of this project was designed to use a combination of the best available atmospheric moisture data including: radiosonde (balloon/acft/rocket), HIRS/MSU (TOVS) retrievals, and SSM/I retrievals, to produce a one-year, global, high resolution data set of integrated column water vapor (precipitable water) with a horizontal resolution of 1 degree, and a temporal resolution of one day. The time period of this pilot product was to be det3ermined by the availability of all the input data sets. January 1988 through December 1988 were selected. In addition, a sample of vertically integrated liquid water content (LWC) was to be produced with the same temporal and spatial parameters. This sample was to be produced over ocean areas only. Three main steps are followed to produce a merged water vapor and liquid water product. Input data from Radiosondes, TOVS, and SSMI/I is quality checked in steps one and two. Processing is done in step two to generate individual total column water vapor and liquid water data sets. The third step, and final processing task, involves merging the individual output

The NC3Rs gateway: Accelerating scientific discoveries with new 3Rs models and technologies

PubMed Central

Percie du Sert, Nathalie; Robinson, Vicky

2018-01-01

This editorial introduces the NC3Rs gateway, which publishes articles and reviews on new models and technologies emerging from NC3Rs-funded research. The aim is to raise awareness about these approaches, increase confidence in their capability, and provide sufficient information to facilitate their uptake by others. PMID:29862024

HLA variants rs9271366 and rs9275328 are associated with systemic lupus erythematosus susceptibility in Malays and Chinese.

PubMed

Chai, H C; Phipps, M E; Othman, I; Tan, L P; Chua, K H

2013-02-01

Human leukocyte antigen (HLA) antigens and genes have long been reported associated with systemic lupus erythematosus (SLE) susceptibility in many populations. With the advance in technologies such as genome-wide association studies, many newly discovered SLE-associated single-nucleotide polymorphisms (SNPs) have been reported in recent years. These include HLA-DRB1/HLA-DQA1 rs9271366 and HLA-DQB1/HLA-DQA2 rs9275328. Our aim was to investigate these SNPs in a Malaysian SLE cohort. SNPs rs9271366 and rs9275328 were screened across 790 Malaysian citizens from three ethnic groups (360 patients and 430 healthy volunteers) by Taqman SNP genotyping assays. Allele and genotyping frequencies, Hardy-Weinberg equilibrium, Fisher's exact test and odds ratio were calculated for each SNP and ethnic group. Linkage disequilibrium and interaction between the two SNPs were also evaluated. The minor allele G and its homozygous genotype GG of HLA-DRB1/HLA-DQA1 rs9271366 significantly increased the SLE susceptibility in Malaysian patients, including those of Malay and Chinese ethnicity (odds ratio (OR) > 1, p < 0.05). As for HLA-DQB1/HLA-DQA2 rs9275328, the minor allele T and the heterozygous genotype CT conferred protective effect to SLE in Malaysians, as well as in Malays and Chinese, by having OR < 1 and p value <0.05. Both SNPs did not show associations to SLE in Indians. D' and r (2) values for the two SNPs in LD analysis were 0.941 and 0.065, respectively, with haplotype GC and AT being significantly associated with SLE (p < 5.0 × 10(-4)) after 10,000 permutations were performed. The MDR test clustered the genotype combinations of GG and CC, and AG and CC of rs9271366 and rs9275328, accordingly, as high-risk group, and the two SNPs interacted redundantly by removing 1.96% of the entropy. Our findings suggest that in addition to some classical HLA variants, rs9271366 and rs9275328 are additional polymorphisms worth considering in the Malaysian and possibly in

Role of redoximiRs in fibrogenesis.

PubMed

Fierro-Fernández, Marta; Miguel, Verónica; Lamas, Santiago

2016-04-01

Fibrosis can be defined as an excessive accumulation of extracellular matrix (ECM) components, ultimately leading to stiffness, scarring and devitalized tissue. MicroRNAs (miRNAs) are short, 19-25 nucleotides (nt), non-coding RNAs involved in the post-transcriptional regulation of gene expression. Recently, miRNAs have also emerged as powerful regulators of fibrotic processes and have been termed "fibromiRs". Oxidative stress represents a self-perpetuating mechanism in fibrogenesis. MiRNAs can also influence the expression of genes responsible for the generation of reactive oxygen species (ROS) and antioxidant defence and are termed "redoximiRs". Here, we review the current knowledge of mechanisms by which "redoximiRs" regulate fibrogenesis. This new set of miRNAs may be called "redoxifibromiRs". Copyright © 2015 The Authors. Published by Elsevier B.V. All rights reserved.

Polymorphism of rs7688672 and rs10033237 in cGKII/PRKG2 and gout susceptibility of Han population in northern China.

PubMed

Guo, Min; Cheng, Zhifeng; Li, Changgui; Li, Shanshan; Li, Ming; Wang, Mingli; Xu, Jinmei; Tang, Yingying; Wang, Yujing; Qiu, Wenli; Liu, Xiaomin

2015-05-10

Gout is a genetic or acquired metabolic disease caused by increase of uric acid synthesis resulted from purine metabolic abnormalities. Whether cGMP-dependent protein kinase 2 (cGKII/PRKG2) is correlated with gout remains controversial. The objective of the present study was to investigate whether there is a correlation between polymorphism of cGKII/PRKG2 and gout susceptibility of Han population in northern China. Four hundred and five male patients with gout in the case group and 429 controls in the control group were collected from the Department of Endocrinology and Metabolic Disease, the Fourth Affiliated Hospital of Harbin Medical University. A case-control study method was used to study the correlation between cGKII/PRKG2 polymorphism rs7688672 and rs10033237 and gout susceptibility. The genotype frequencies of rs7688672 and rs10033237 polymorphisms of cGKII/PRKG2 in the case group and the control group both were in accordance with Hardy-Weinberg equilibrium. There were significant differences of rs10033237 in the allele frequencies and genotype distributions (P<0.05) between the two groups, while no association was found between rs7688672 and gout. Combined mutation sites AA(*) from rs7688672 and rs10033237 were negatively correlated with gout susceptibility, whereas haplotype GG(*) was positively correlated with gout susceptibility. In conclusion, patients with rs10033237 polymorphism of cGKII/PRKG2 gene are more likely to suffer from gout. With regard to haplotypes of rs10033237 and rs7688672, both AA(*) and GG(*) are related to gout. AA(*) is a gout susceptible gene, whereas GG(*) is a protective gene. Copyright © 2015 Elsevier B.V. All rights reserved.

Precipitable Water Vapor Characterization In The Gulf Of Cadiz Region (Southwestern Spain) Based On Sun Photometer, GPS And Radiosonde Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Torres, B.; Cachorro, V. E.; Toledano, C.

2010-09-16

Column integrated water vapor (IWV) data in the Gulf of Cádiz area (Southwestern Spain) are analyzed during the period 2001 to 2005 with two aims: 1) to establish the climatology over this area using three different techniques, such as Sun-Photometer (SP), Global Position System (GPS) and Radiosondes, and 2) to take advantage of this comparative process to assess the quality of radiometric IWV data collected at the RIMA-AERONET station. The 5 years of climatological series gives a mean value of about 2 cm (STD=0.72) and a clear seasonal behavior as a general feature, with the highest values in summer andmore » the lowest in winter. In the multi-annual monthly means basis, the highest values are reached in August-September, with a mean value of 2.5-2.6 cm, whereas the lowest are obtained in January-February, with an average of 1.4-24 1.5. However the most relevant results for this area is the observed local minimum in July, occurring during the maximum of desert dust intrusions in the southern Iberian Peninsula. A comparison process allows us to evaluate the agreement of IWV data sets between these three different techniques at different temporal scales because of different time sampling. On a daily basis and taking GPS as the reference value we have a bias or difference between Radiosonde and GPS measurements for the entire data base of 0.07 cm (relative bias of 3%) and RMSE of 0.33. For SP-GPS we have a bias of 0.14 cm (about 7%) and RMSE of 0.37. On a monthly basis the differences between Radiosonde and GPS values varies from summer with 2% to winter with -8% and between SP and GPS values from 3% in summer to -14% in winter. The observed bias between GPS and SP varies during each SP operational period, with lower values at the beginning of the measurements and increasing until the end of its measurement term and with the bias values being quite dependent on each individual SP. The observed differences highlight the importance of drift in each Sun

Monitoring Cirrus Clouds Using Lamp Observations in Association with Balloon-Borne Radiosonde Over Nainital: Few Case Studies

NASA Astrophysics Data System (ADS)

Solanki, R.; Singh, N.

2012-12-01

Upper tropospheric clouds such as cirrus have been identified as one of the important regulator of the radiation balance of the earth atmospheric-system. Though the satellite observation provide valuable information on cirrus clouds, they have limitations on spectral, temporal and spatial coverage, hence the need for local remote sensing, such as LiDAR a leading technique for studying the characteristics and properties of cirrus clouds. The upgraded version of a micro pulse LiDAR popularly known as LiDAR for Atmospheric Measurements and Probing (LAMP) developed by National Atmospheric Research Laboratory (NARL) is operational since October 2011, at ARIES Nainital (29.4oN, 79.5oE, ~2 km above the mean sea level) a high altitude location in the central Himalayas. Regular observations are being carried out in order to study the vertical distribution of aerosols, clouds and boundary layer structure etc. Altitude profiles of range corrected photon count and derived aerosol back scatter coefficients have depicted the occurrence of high altitude cirrus clouds/ ice clouds in an altitude range of 7 to 11 Km. Among the total observations in 27% of the cases the occurrence of cirrus clouds were detected. The corresponding cloud parameters such as temperature (-59 0C), horizontal wind speed (26 m/s), vertical wind speed (24 m/s), Relative Humidity (61%), at a height (~9 Km) were measured with Radiosonde observations. The prevailing region for cirrus cloud is found to be highly turbulent, indicating the region of divergence followed by a convergence, showing the favorable conditions for cirrus cloud formation. Optical and geometrical characteristics of Cirrus clouds have been analyzed using LiDAR and radiosonde measurements. The temperature and thickness dependence of optical properties have also been studied. The results will be further substantiated with CALIPSO satellite and details will be discussed during the presentation.

Effect of UDP-Glucuronosyltransferase (UGT) 1A Polymorphism (rs8330 and rs10929303) on Glucuronidation Status of Acetaminophen

PubMed Central

Tahir, Imtiaz Mahmood; Iqbal, Tahira; Saleem, Sadaf; Perveen, Sofia; Farooqi, Aboubakker

2017-01-01

Interindividual variability in polymorphic uridine diphosphate-glucuronosyltransferase 1A1 (UGT1A1) ascribed to genetic diversity is associated with relative glucuronidation level among individuals. The present research was aimed to study the effect of 2 important single nucleotide polymorphisms (SNPs; rs8330 and rs10929303) of UGT1A1 gene on glucuronidation status of acetaminophen in healthy volunteers (n = 109). Among enrolled volunteers, 54.13% were male (n = 59) and 45.87% were female (n = 50). The in vivo activity of UGT1A1 was investigated by high-performance liquid chromatography-based analysis of glucuronidation status (ie, acetaminophen and acetaminophen glucuronide) in human volunteers after oral intake of a single dose (1000 mg) of acetaminophen. The TaqMan SNP genotyping assay was used for UGT1A1 genotyping. The wild-type genotype (C/C) was observed the most frequent one for both SNPs (rs8330 and rs10929303) and associated with fast glucuronidator phenotypes. The distribution of variant genotype (G/G) for SNP rs8330 was observed in 5% of male and 8% of the female population; however, for SNP rs10929303, the G/G genotype was found in 8% of both genders. A trimodal distribution (fast, intermediate, and slow) based on phenotypes was observed. Among the male participants, the glucuronidation phenotypes were observed as 7% slow, 37% intermediate, and 56% fast glucuronidators; however, these findings for the females were slightly different as 8%, 32%, and 60% respectively. The k-statistics revealed a compelling evidence for good concordance between phenotype and genotype with a k value of 1.00 for SNP rs8330 and 0.966 for SNP rs10929303 in our population. PMID:28932176

PNPLA3 rs1010023 Predisposes Chronic Hepatitis B to Hepatic Steatosis but Improves Insulin Resistance and Glucose Metabolism.

PubMed

Pan, Qin; Chen, Mei-Mei; Zhang, Rui-Nan; Wang, Yu-Qin; Zheng, Rui-Dan; Mi, Yu-Qiang; Liu, Wen-Bin; Shen, Feng; Su, Qing; Fan, Jian-Gao

2017-01-01

PNPLA3 polymorphisms serve as the genetic basis of hepatic steatosis in normal population and lead to dysregulated glucose metabolism. Whether it underlies the hepatic steatosis and glucose homeostasis in chronic hepatitis B patients remains uncertain. Here, we investigated the PNPLA3 polymorphisms in biopsy-proven chronic hepatitis B patients with (CHB+HS group, n = 52) or without hepatic steatosis (CHB group, n = 47) and non-CHB subjects with (HS group, n = 37) or without hepatic steatosis (normal group, n = 45). When compared to the TT genotype, C-allele at PNPLA3 rs1010023 (CC and TC genotypes) conferred higher risk to hepatic steatosis in chronic hepatitis B patients (odds ratio (OR) = 1.768, 95% confidence interval (CI): 1.027-3.105; P = 0.045) independent of age, gender, and body mass index. In contrast to their role in hepatic steatosis, CC and TC genotypes of PNPLA3 rs1010023 were correlated to significant improvement of homeostasis model assessment index (HOMA-IR) as compared to TT genotype in the CHB+HS group. Downregulated fasting blood glucose also characterized the CHB+HS patients with C-allele at PNPLA3 rs1010023 (CC/TC versus TT: 4.81 ± 0.92 mmol/L versus 5.86 ± 2.11 mmol/L, P = 0.02). These findings suggest that PNPLA3 rs1010023 may predispose chronic hepatitis B patients to hepatic steatosis but protects them from glucose dysregulation by attenuating insulin resistance.

Sequence Analysis of APOA5 Among the Kuwaiti Population Identifies Association of rs2072560, rs2266788, and rs662799 With TG and VLDL Levels

PubMed Central

Jasim, Anfal A.; Al-Bustan, Suzanne A.; Al-Kandari, Wafa; Al-Serri, Ahmad; AlAskar, Huda

2018-01-01

Common variants of Apolipoprotein A5 (APOA5) have been associated with lipid levels yet very few studies have reported full sequence data from various ethnic groups. The purpose of this study was to analyse the full APOA5 gene sequence to identify variants in 100 healthy Kuwaitis of Arab ethnicities and assess their association with variation in lipid levels in a cohort of 733 samples. Sanger method was used in the direct sequencing of the full 3.7 Kb APOA5 and multiple sequence alignment was used to identify variants. The complete APOA5 sequence in Kuwaiti Arabs has been deposited in GenBank (KJ401315). A total of 20 reported single nucleotide polymorphisms (SNPs) were identified. Two novel SNPs were also identified: a synonymous 2197G>A polymorphism at genomic position 116661525 and a 3′ UTR 3222 C>T polymorphism at genomic position 116660500 based on human genome assembly GRCh37/hg:19. Five SNPs along with the two novel SNPs were selected for validation in the cohort. Association of those SNPs with lipid levels was tested and minor alleles of three SNPs (rs2072560, rs2266788, and rs662799) were found significantly associated with TG and VLDL levels. This is the first study to report the full APOA5 sequence and SNPs in an Arab ethnic group. Analysis of the variants identified and comparison to other populations suggests a distinctive genetic component in Arabs. The positive association observed for rs2072560 and rs2266788 with TG and VLDL levels confirms their role in lipid metabolism. PMID:29686695

Sequence Analysis of APOA5 Among the Kuwaiti Population Identifies Association of rs2072560, rs2266788, and rs662799 With TG and VLDL Levels.

PubMed

Jasim, Anfal A; Al-Bustan, Suzanne A; Al-Kandari, Wafa; Al-Serri, Ahmad; AlAskar, Huda

2018-01-01

Common variants of Apolipoprotein A5 ( APOA 5) have been associated with lipid levels yet very few studies have reported full sequence data from various ethnic groups. The purpose of this study was to analyse the full APOA5 gene sequence to identify variants in 100 healthy Kuwaitis of Arab ethnicities and assess their association with variation in lipid levels in a cohort of 733 samples. Sanger method was used in the direct sequencing of the full 3.7 Kb APOA5 and multiple sequence alignment was used to identify variants. The complete APOA5 sequence in Kuwaiti Arabs has been deposited in GenBank (KJ401315). A total of 20 reported single nucleotide polymorphisms (SNPs) were identified. Two novel SNPs were also identified: a synonymous 2197G>A polymorphism at genomic position 116661525 and a 3' UTR 3222 C>T polymorphism at genomic position 116660500 based on human genome assembly GRCh37/hg:19. Five SNPs along with the two novel SNPs were selected for validation in the cohort. Association of those SNPs with lipid levels was tested and minor alleles of three SNPs (rs2072560, rs2266788, and rs662799) were found significantly associated with TG and VLDL levels. This is the first study to report the full APOA5 sequence and SNPs in an Arab ethnic group. Analysis of the variants identified and comparison to other populations suggests a distinctive genetic component in Arabs. The positive association observed for rs2072560 and rs2266788 with TG and VLDL levels confirms their role in lipid metabolism.

Association of SNPs in GHSR rs292216 and rs509035 on dietary intake in Indonesian obese female adolescents.

PubMed

Luglio, Harry Freitag; Inggriyani, Cut Gina; Huriyati, Emy; Julia, Madarina; Susilowati, Rina

2014-01-01

Obesity has been linked to high dietary intake and low physical activity. Studies showed that those factors were not only regulated by environment but also by genetic. However, the relationship is less been understood in obese children and adolescents. The objective of this study was to examine the role of SNPs in GHSR rs292216 and rs509035 on dietary intake in obese female adolescents. This is an observational study with cross sectional design. Respondents were obese female adolescents enrolled from obesity screening done in six junior high schools in Yogyakarta. Dietary intake was measured using 6 days 24 hours inconsecutive dietary recall. Genotyping of 2 SNPs from GHSR was done using FRLP-PCR. There were 78 obese female adolescents joined this study. We found that no significant association between SNPs GHSR and dietary intake (p < 0.05). In addition, a SNP-SNP interaction analysis shown there is no difference between combination of GHSR rs292216 and rs509035 on dietary intake (p < 0.05). We concluded that SNPs on GHSR rs292216 and rs509035 were not related to dietary intake in Indonesian obese female adolescents. Further study is necessary to investigate the effect of those genes on dietary intake in the broader population.

High resolution vertical profiles of wind, temperature and humidity obtained by computer processing and digital filtering of radiosonde and radar tracking data from the ITCZ experiment of 1977

NASA Technical Reports Server (NTRS)

Danielson, E. F.; Hipskind, R. S.; Gaines, S. E.

1980-01-01

Results are presented from computer processing and digital filtering of radiosonde and radar tracking data obtained during the ITCZ experiment when coordinated measurements were taken daily over a 16 day period across the Panama Canal Zone. The temperature relative humidity and wind velocity profiles are discussed.

A Calibration of the MeteoSwiss RAman Lidar for Meteorological Observations (RALMO)Water Vapour Mixing Ratio Measurements using a Radiosonde Trajectory Method

NASA Astrophysics Data System (ADS)

Hicks-Jalali, Shannon; Sica, R. J.; Haefele, Alexander; Martucci, Giovanni

2018-04-01

With only 50% downtime from 2007-2016, the RALMO lidar in Payerne, Switzerland, has one of the largest continuous lidar data sets available. These measurements will be used to produce an extensive lidar water vapour climatology using the Optimal Estimation Method introduced by Sica and Haefele (2016). We will compare our improved technique for external calibration using radiosonde trajectories with the standard external methods, and present the evolution of the lidar constant from 2007 to 2016.

Evidence of horizontal and vertical transport of water in the Southern Hemisphere tropical tropopause layer (TTL) from high-resolution balloon observations

NASA Astrophysics Data System (ADS)

Khaykin, Sergey M.; Pommereau, Jean-Pierre; Riviere, Emmanuel D.; Held, Gerhard; Ploeger, Felix; Ghysels, Melanie; Amarouche, Nadir; Vernier, Jean-Paul; Wienhold, Frank G.; Ionov, Dmitry

2016-09-01

High-resolution in situ balloon measurements of water vapour, aerosol, methane and temperature in the upper tropical tropopause layer (TTL) and lower stratosphere are used to evaluate the processes affecting the stratospheric water budget: horizontal transport (in-mixing) and hydration by cross-tropopause overshooting updrafts. The obtained in situ evidence of these phenomena are analysed using satellite observations by Aura MLS (Microwave Limb Sounder) and CALIPSO (Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation) together with trajectory and transport modelling performed using CLaMS (Chemical Lagrangian Model of the Stratosphere) and HYSPLIT (Hybrid Single-Particle Lagrangian Integrated Trajectory) model. Balloon soundings were conducted during March 2012 in Bauru, Brazil (22.3° S) in the frame of the TRO-Pico campaign for studying the impact of convective overshooting on the stratospheric water budget. The balloon payloads included two stratospheric hygrometers: FLASH-B (Fluorescence Lyman-Alpha Stratospheric Hygrometer for Balloon) and Pico-SDLA instrument as well as COBALD (Compact Optical Backscatter Aerosol Detector) sondes, complemented by Vaisala RS92 radiosondes. Water vapour vertical profiles obtained independently by the two stratospheric hygrometers are in excellent agreement, ensuring credibility of the vertical structures observed. A signature of in-mixing is inferred from a series of vertical profiles, showing coincident enhancements in water vapour (of up to 0.5 ppmv) and aerosol at the 425 K (18.5 km) level. Trajectory analysis unambiguously links these features to intrusions from the Southern Hemisphere extratropical stratosphere, containing more water and aerosol, as demonstrated by MLS and CALIPSO global observations. The in-mixing is successfully reproduced by CLaMS simulations, showing a relatively moist filament extending to 20° S. A signature of local cross-tropopause transport of water is observed in a particular

Genetic polymorphisms of IL-18 rs1946518 and IL-1β rs16944 are associated with prognosis and survival of acute myeloid leukemia.

PubMed

Wang, Hong; Hua, Mingqiang; Wang, Shukang; Yu, Jie; Chen, Chen; Zhao, Xueyun; Zhang, Chen; Zhong, Chaoqin; Wang, Ruiqing; He, Na; Hou, Ming; Ma, Daoxin

2017-03-01

Though the pathogenesis of AML is still unknown, accumulating evidence revealed that immune response plays a vital part in it. NLRP3 inflammasome as a component of immune system has been found related to several cancers. The single nucleotide polymorphisms (SNPs) of NLRP3 inflammasome genes may be related to pathogenesis and prognosis of AML. We determined polymorphisms of NLRP3 (rs35829419), CARD8 (rs2043211), IL-1β (rs16944), IL-18 (rs1946518) and NF-κB -94 ins/del ATTG in de novo AML patients to find out whether they play roles in the susceptibility and severity of AML. In our study, 383 AML cases and 300 randomly selected healthy individuals were examined for the polymorphisms and expression of NLRP3 genes. IL-1β (rs16944) polymorphism in different risk AML subgroups was found statistically different, with more GA genotype in favorable-risk cytogenetics group. We also demonstrated that the bone marrow blasts of patients carrying IL-18 (rs1946518) GG or GT genotype were higher than patients of TT genotype. IL-18 plasma level of patients with IL-18 (rs1946518) GT or TT genotype was higher than GG genotype. Moreover, the GT genotype of IL-18 (rs1946518) led to statistically poorer AML-specific survival. IL-1β (rs16944) and IL-18 (rs1946518) may be served as potential predictors for AML.

Ares V and RS-68B

NASA Technical Reports Server (NTRS)

Creech, Steve; Taylor, Jim; Bellamy, Scott; Kuck, Fritz

2008-01-01

Ares V is the heavy lift vehicle NASA is designing for lunar and other space missions. It has significantly more lift capability than the Saturn V vehicle used for the Apollo missions to the moon. Ares V is powered by two recoverable 5.5 segment solid rocket boosters and six RS-68B engines on the core stage. The upper stage, designated as the Earth Departure Stage, is powered by a single J-2X engine. This paper provides an overview of the Ares V vehicle and the RS-68B engine, an upgrade to the Pratt & Whitney Rocketdyne RS-68 engine developed for the Delta IV vehicle.

Association of TNF-α rs1799964 and IL-1β rs16944 polymorphisms with multiple system atrophy in Chinese Han population.

PubMed

Zhou, Xin; Wang, Chunrong; Chen, Zhao; Peng, Yun; Peng, Huirong; Hou, Xuan; Ye, Wei; Qiu, Rong; Xia, Kun; Tang, Beisha; Jiang, Hong

2018-01-07

Recent evidence suggested that several single nucleotide polymorphisms (SNPs) of inflammation-related genes (TNF-α rs1799964, IL-1α rs1800587, IL-1β rs16944, IL-8 rs4073, ICAM-1 rs5498) were associated with multiple system atrophy (MSA). Herein, we conducted this case-control study to evaluate the possible correlation between the five SNPs related to inflammation and MSA in Chinese Han population. We recruited 154 sporadic patients with MSA and 223 health controls in this study. All subjects were genotyped for the five SNPs using polymerase chain reaction amplification and Sanger sequencing. TNF-α rs1799964, genotype distribution and minor allele frequency (MAF) showed significant differences between patients and controls, which might illustrate the minor allele C may increase the risk for MSA (genotype, P = 0.006, OR = 1.245, 95% CI = [1.066-1.455]; allele, P = 0.001, OR = 1.887, 95% CI = [1.303-2.733]). For rs16944, patients carrying AA genotype showed a nearly 5-year early age at onset (AAO) than GG genotype (50.52 ± 7.45 years vs. 54.90 ± 7.21 years, P = 0.037). No differences were found in genotype distribution and MAF of the five SNPs between patients with MSA with predominant cerebellar ataxia (MSA-C) and with predominant Parkinsonism (MSA-P). Our study suggests that rs1799964 of TNF-α may act as a risk factor for MSA and the IL-1β rs16944 might be a genetic factor that modifies the AAO in MSA. Moreover, the exact mechanism of neuroinflammatory response in MSA deserves further exploration.

Interleukin-18 (rs187238) and glucose transporter 4 (rs5435) polymorphisms in Euro-Brazilians with type 1 diabetes.

PubMed

Al-Lahham, Y; Mendes, A K B; Souza, E M; Alberton, D; Rego, F G M; Valdameri, G; Picheth, G

2017-09-21

Type 1 diabetes (T1D) is an autoimmune disease with a strong genetic component that has been associated with several genetic loci. Interleukin 18 (IL-18) is a potent proinflammatory cytokine, which is involved in the innate and adaptive immune responses, and in the pathogenesis of various diseases including T1D. Glucose transporter 4 (GLUT4) is known to be an insulin-responsive glucose transporter and has been associated with various diseases, including diabetes mellitus. We investigated the association of the polymorphisms rs187238 (IL-18) and rs5435 (GLUT4) in a case-control study in Euro-Brazilians with T1D (N = 136) and healthy subjects (N = 144). Real-time PCR with TaqMan ® fluorescent probes were applied for genotyping. All polymorphisms were in Hardy-Weinberg equilibrium. The minor allele frequencies for the G-allele (rs187238; IL-18) in healthy and T1D groups were 28.5% [95%CI = 23-34%] vs 31.6% [95%CI = 26-37%], P = 0.416, and for the T-allele (rs5435, GLUT4) were 33% [95%CI = 28-39] vs 27% [95%CI = 23-33%], P = 0.167, respectively. Genotype comparisons for both polymorphisms showed no significant differences (P > 0.05). The polymorphisms rs187238 and rs5435 were not associated with T1D in the studied population. The minor allele frequencies for both polymorphisms were similar to those of other Caucasian populations.

Report of the Hydrographic Service Royal Australian Navy for the Year Ended 30th June 1989. Issue Number 25

DTIC Science & Technology

1989-06-30

charts 369 are Austral- ian and 44 British Admiralty. Australian charts represent 170 in imperial units and 199 in metric units: 92 in metric for...and operations advi(.e for the introduction into service of Vaisala Marwin Systems by the Royal Austral- ian Artiller,. 15 SURVEY INSTRUCTION, RAN... Maitland Pemberton Scott South Seringapatam Timor Trough Wilson Promontory Shark Bay BATHYMETRIC MANUSCRIPT AUSLIG Cove Blue Mud Ba Port Langdon Roper

Muscle-Related Polymorphisms (MSTN rs1805086 and ACTN3 rs1815739) Are Not Associated with Exceptional Longevity in Japanese Centenarians.

PubMed

Fuku, Noriyuki; Alis, Rafael; Yvert, Thomas; Zempo, Hirofumi; Naito, Hisashi; Abe, Yukiko; Arai, Yasumichi; Murakami, Haruka; Miyachi, Motohiko; Pareja-Galeano, Helios; Emanuele, Enzo; Hirose, Nobuyoshi; Lucia, Alejandro

2016-01-01

Myostatin (MSTN) and α-actinin-3 (ACTN3) genes are potentially associated with preservation of muscle mass and oxidative capacity, respectively. To explore the possible role of these genes in exceptional longevity (EL), the allele/genotype frequency distribution of two polymorphisms in MSTN (rs1805086, K153R) and ACTN3 (rs1815739, R577X) was studied in Japanese centenarians of both sexes (n = 742) and healthy controls (n = 814). The rs1805086 R-allele (theoretically associated with muscle mass preservation at the expense of oxidative capacity) was virtually absent in the two groups, where genotype distributions were virtually identical. Likewise, no differences in allele (p = 0.838 (women); p = 0.193 (men); p = 0.587 (both sexes)) or genotype distribution were found between groups for ACTN3 rs1815739 (p = 0.975 (women), p = 0.136 (men), p = 0.752 (both sexes)). Of note, however, the frequency of the rs1805086 R-allele observed here is the lowest been reported to date whereas that of the 'highly oxidative/efficient' rs1815739 XX genotype in Japanese male centenarians (33.3%) or supercentenarians of both sexes (≥110 years) are the highest (32.6%), for a non-American population. No definite conclusions can be inferred in relation to EL owing to its lack of association with both rs1815739 and rs1805086. However, it cannot be excluded that these gene variants could eventually be related to a "healthy" metabolic phenotype in the Japanese population. Further research might determine if such metabolic profile is among the factors that can potentially predispose these individuals to live longer than Caucasians and what genetic variants might be actually involved.

Muscle-Related Polymorphisms (MSTN rs1805086 and ACTN3 rs1815739) Are Not Associated with Exceptional Longevity in Japanese Centenarians

PubMed Central

Yvert, Thomas; Zempo, Hirofumi; Naito, Hisashi; Abe, Yukiko; Arai, Yasumichi; Murakami, Haruka; Miyachi, Motohiko; Pareja-Galeano, Helios; Emanuele, Enzo; Hirose, Nobuyoshi; Lucia, Alejandro

2016-01-01

Myostatin (MSTN) and α-actinin-3 (ACTN3) genes are potentially associated with preservation of muscle mass and oxidative capacity, respectively. To explore the possible role of these genes in exceptional longevity (EL), the allele/genotype frequency distribution of two polymorphisms in MSTN (rs1805086, K153R) and ACTN3 (rs1815739, R577X) was studied in Japanese centenarians of both sexes (n = 742) and healthy controls (n = 814). The rs1805086 R-allele (theoretically associated with muscle mass preservation at the expense of oxidative capacity) was virtually absent in the two groups, where genotype distributions were virtually identical. Likewise, no differences in allele (p = 0.838 (women); p = 0.193 (men); p = 0.587 (both sexes)) or genotype distribution were found between groups for ACTN3 rs1815739 (p = 0.975 (women), p = 0.136 (men), p = 0.752 (both sexes)). Of note, however, the frequency of the rs1805086 R-allele observed here is the lowest been reported to date whereas that of the ‘highly oxidative/efficient’ rs1815739 XX genotype in Japanese male centenarians (33.3%) or supercentenarians of both sexes (≥110 years) are the highest (32.6%), for a non-American population. No definite conclusions can be inferred in relation to EL owing to its lack of association with both rs1815739 and rs1805086. However, it cannot be excluded that these gene variants could eventually be related to a “healthy” metabolic phenotype in the Japanese population. Further research might determine if such metabolic profile is among the factors that can potentially predispose these individuals to live longer than Caucasians and what genetic variants might be actually involved. PMID:27861536

Effects of rs6234/rs6235 and rs6232/rs6234/rs6235 PCSK1 single-nucleotide polymorphism clusters on proprotein convertase 1/3 biosynthesis and activity.

PubMed

Mbikay, Majambu; Sirois, Francine; Nkongolo, Kabwe K; Basak, Ajoy; Chrétien, Michel

2011-12-01

Proprotein convertase 1/3 (PC1/3) is one of the endoproteases initiating the proteolytic activation of prohormones and proneuropeptides in the secretory pathway. It is produced as a zymogen that is subsequently modified by activity-determining cleavages at the amino and the carboxyl termini. In human, it is encoded by the PCSK1 locus on chromosome 5. Spontaneous inactivating mutations in its gene have been linked to obesity. Minor alleles of the common non-synonymous single-nucleotide polymorphisms (SNPs) rs6232 (T>C, N221D), rs6234 (G>C, Q665E) and rs6235 (C>G, S690T) have been associated with increased risk of obesity. We have shown that the variations associated with these SNPs are linked on minor PCSK1 alleles. In this study, we examined the impact of amino acid substitutions specified by the minor PCSK1 alleles on PC1/3 biosynthesis and prohormone processing activity in cultured cells. The common and variant isoforms of PC1/3 were expressed in transfected rat pituitary GH4C1 cells with or without proopiomelanocortin (POMC) as a substrate. Secreted PC1/3- or POMC-related proteins and peptides were analyzed by immunoblotting and immunoprecipitation. When expressed in GH4C1 cells, the triple-variant PC1/3 underwent significantly more proteolytic processing at the amino and carboxyl termini than the common and double-variant isoforms. However, there was no detectable difference among these isoforms in their ability to process POMC in the transfected cells. Since truncation of PC1/3 in its C-terminal region reportedly renders the enzyme unstable, we speculate that the accentuated processing of the triple variant in this region may, in vivo, create a subtle deficit of PC1/3 enzymatic activity in endocrine and neuroendocrine cells, causing impaired processing of prohormones and proneuropeptides to their bioactive forms. Copyright © 2011 Elsevier Inc. All rights reserved.

The rs4846049 polymorphism in the 3'UTR region of the MTHFR gene increases the migraine susceptibility in an Iranian population.

PubMed

Salehi, Mohaddeseh; Amin-Beidokhti, Mona; Safarpour Lima, Behnam; Gholami, Milad; Javadi, Gholam-Reza; Mirfakhraie, Reza

2018-01-01

Migraine is a painful complex neurovascular disease characterized by recurrent moderate-to-severe headaches. Increased level of homocysteine is related to dilation of cerebral vessels and endothelial injury that could trigger migraine attacks. Functional polymorphisms in the MTHFR gene affect homocysteine metabolism and, therefore, play an important role in the etiology of the disease. We aimed to investigate the possible association between MTHFR gene rs4846049, C677T, and A1298C polymorphisms and the risk of migraine in Iranian population. In this genetic association study, 498 individuals were enrolled, including 223 migraine patients and 275 healthy controls. Genotyping was performed using tetra-primer ARMS-PCR for rs4846049 and PCR-restriction fragment length polymorphism for C677T and A1298C polymorphisms. The association between rs4846049 and C677T polymorphisms and migraine was observed. For the rs4846049 polymorphism, the association was detected under a dominant model ( P =0.007; odds ratio [OR] =0.60; 95% confidence interval [CI], 0.41-0.87), and for the C677T polymorphism, the TT genotype frequency was significantly different in the studied groups ( P =0.009; OR =2.48; 95% CI, 1.25-4.92). No significant differences in the genotype or allele frequencies were found for the A1298C polymorphism between the migraineurs and controls. Present data provide evidence for the association of rs4846049 and C677T polymorphisms in the MTHFR gene and migraine. Further studies are required to validate the significance of the studied genetic variations in diverse ethnic populations.

Production of a long-term global water vapor and liquid water data set using ultra-fast methods to assimilate multi-satellite and radiosonde observations

NASA Technical Reports Server (NTRS)

Vonderhaar, Thomas H.; Randel, David L.; Reinke, Donald L.; Stephens, Graeme L.; Ringerud, Mark A.; Combs, Cynthia L.; Greenwald, Thomas J.; Wittmeyer, Ian L.

1995-01-01

There is a well-documented requirement for a comprehensive and accurate global moisture data set to assist many important studies in atmospheric science. Currently, atmospheric water vapor measurements are made from a variety of sources including radiosondes, aircraft and surface observations, and in recent years, by various satellite instruments. Creating a global data set from a single measuring system produces results that are useful and accurate only in specific situations and/or areas. Therefore, an accurate global moisture data set has been derived from a combination of these measurement systems. Under a NASA peer-reviewed contract, STC-METSAT produced two 5-yr (1988-1992) global data sets. One is the total column (integrated) water vapor data set and the other, a global layered water vapor data set using a combination of radiosonde observations, Television and Infrared Observation Satellite (TIROS) Operational Satellite (TOVS), and Special Sensor Microwave/Imager (SSM/I) data sets. STC-METSAT also produced a companion, global, integrated liquid water data set. The complete data set (all three products) has been named NVAP, an anachronym for NASA Water Vapor Project. STC-METSAT developed methods to process the data at a daily time scale and 1 x 1 deg spatial resolution.

A WFS1 Haplotype Consisting of the Minor Alleles of rs752854, rs10010131, and rs734312 Shows a Protective Role Against Type 2 Diabetes in Russian Patients

PubMed Central

Chistiakov, Dimitry A; Khodyrev, Dmitry S.; Smetanina, Svetlana A.; Bel'chikova, Larisa N.; Suplotova, Lyudmila A.; Nosikov, Valery V.

2010-01-01

BACKGROUND: Rare variants of the WFS1 gene encoding wolframin cause Wolfram syndrome, a monogenic disease associated with diabetes insipidus, diabetes mellitus, optic atrophy, and deafness. In contrast, common variants of WFS1 showed association with type 2 diabetes (T2D) in numerous Caucasian populations. AIM: In this study, we tested whether the markers rs752854, rs10010131, and rs734312, located in the WFS1 gene, are related to the development of T2D in a Russian population. METHODS: The polymorphic markers were genotyped in Russian diabetic (n = 1,112) and non-diabetic (n = 1,097) patients using a Taqman allele discrimination assay. The correlation between the carriage of disease-associated WFS1 variants and the patients' clinical and metabolic characteristics was studied using ANOVA and ANCOVA. Adjustment for confounding variables such as gender, age, body mass index, obesity, HbA1c, and hypertension was made. RESULTS: Haplotype GAG, consisting of the minor alleles of rs752854, rs10010131, and rs734312, respectively, showed association with decreased risk of T2D (OR = 0.44, 95% CI = 0.32-0.61, p = 4.3 x 10-7). Compared to other WFS1 variants, non-diabetic individuals homozygous for GAG/CAG had significantly increased fasting insulin (padjusted = 0.047) and homeostasis model assessment of β-cell function (HOMA-β) index (padjusted = 0.006). Diabetic patients homozygous for GAG/GAG showed significantly elevated levels of 2-h insulin (padjusted = 0.029) and HOMA-β = 0.011. CONCLUSIONS: Disease-associated variants of WFS1 contribute to the pathogenesis of T2D through impaired insulin response to glucose stimulation and altered β-cell function. PMID:21713316

PNPLA3 rs1010023 Predisposes Chronic Hepatitis B to Hepatic Steatosis but Improves Insulin Resistance and Glucose Metabolism

PubMed Central

Chen, Mei-Mei; Wang, Yu-Qin; Zheng, Rui-Dan; Mi, Yu-Qiang; Liu, Wen-Bin; Su, Qing

2017-01-01

PNPLA3 polymorphisms serve as the genetic basis of hepatic steatosis in normal population and lead to dysregulated glucose metabolism. Whether it underlies the hepatic steatosis and glucose homeostasis in chronic hepatitis B patients remains uncertain. Here, we investigated the PNPLA3 polymorphisms in biopsy-proven chronic hepatitis B patients with (CHB+HS group, n = 52) or without hepatic steatosis (CHB group, n = 47) and non-CHB subjects with (HS group, n = 37) or without hepatic steatosis (normal group, n = 45). When compared to the TT genotype, C-allele at PNPLA3 rs1010023 (CC and TC genotypes) conferred higher risk to hepatic steatosis in chronic hepatitis B patients (odds ratio (OR) = 1.768, 95% confidence interval (CI): 1.027–3.105; P = 0.045) independent of age, gender, and body mass index. In contrast to their role in hepatic steatosis, CC and TC genotypes of PNPLA3 rs1010023 were correlated to significant improvement of homeostasis model assessment index (HOMA-IR) as compared to TT genotype in the CHB+HS group. Downregulated fasting blood glucose also characterized the CHB+HS patients with C-allele at PNPLA3 rs1010023 (CC/TC versus TT: 4.81 ± 0.92 mmol/L versus 5.86 ± 2.11 mmol/L, P = 0.02). These findings suggest that PNPLA3 rs1010023 may predispose chronic hepatitis B patients to hepatic steatosis but protects them from glucose dysregulation by attenuating insulin resistance. PMID:28695131

Association of the rs7903146 single nucleotide polymorphism at the Transcription Factor 7-like 2 (TCF7L2) locus with type 2 diabetes in Brazilian subjects.

PubMed

Barra, Gustavo Barcelos; Dutra, Ludmila Alves Sanches; Watanabe, Sílvia Conde; Costa, Patrícia Godoy Garcia; Cruz, Patrícia Sales Marques da; Azevedo, Monalisa Ferreira; Amato, Angélica Amorim

2012-11-01

To investigate the association of the T allele of the single nucleotide polymorphism (SNP) rs7903146 of TCF7L2 with the occurrence of T2D in a sample of subjects followed up at the Brasilia University Hospital. The SNP rs7903146 of TCF7L2 was genotyped by allele-specific PCR in 113 patients with known T2D and in 139 non-diabetic controls in Brasilia, Brazil. We found that the T allele of the SNP rs7903146 of TCF7L2 was significantly associated with T2D risk (odds ratio of 3.92 for genotype TT in the recessive genetic model, p = 0.004 and 1.5 for T allele, p = 0.032). These results reinforce previous findings on the consistent association of this genetic factor and the risk of T2D in populations of diverse ethnic backgrounds.

Genetic polymorphisms of surfactant protein D rs2243639, Interleukin (IL)-1β rs16944 and IL-1RN rs2234663 in chronic obstructive pulmonary disease, healthy smokers, and non-smokers.

PubMed

Issac, Marianne Samir M; Ashur, Wafaa; Mousa, Heba

2014-06-01

Chronic obstructive pulmonary disease (COPD) is a complex chronic inflammatory disease that involves the activity of various inflammatory cells and mediators. It has been suggested that susceptibility to COPD is, at least in part, genetically determined. The primary aim of this study was to investigate the association between surfactant protein D (SFTPD) rs2243639, interleukin (IL)-1β rs16944 and IL-1 receptor antagonist (IL-1RN) rs2234663 gene polymorphisms and COPD susceptibility, as well as examining the association between the various IL-1RN/IL-1β haplotypes and pulmonary function tests (PFT). Secondly, we aimed to examine the influence of SFTPD rs2243639 polymorphism on serum surfactant protein D (SP-D) level. A total of 114 subjects were recruited in this study and divided into three groups: 63 COPD patients, 25 asymptomatic smokers, and 26 healthy controls. Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) was performed for the detection of SFTPD rs2243639 and IL-1β rs16944 polymorphisms. Detection of variable numbers of an 86-bp tandem repeat (VNTR) of IL-1RN was done using PCR. Serum SP-D level was measured using enzyme linked-immunosorbent assay. PFTs were measured by spirometry. Carriers of the SFTPD AG and AA polymorphic genotypes constituted 71.4 % of COPD patients versus 48 % in asymptomatic smokers, with a statistically significant difference between the two groups (p = 0.049). Smokers who were carriers of the polymorphic SFTPD rs2243639 A allele (AG and AA genotypes) have a 2.708 times risk of developing COPD when compared with wild-type GG genotype carriers [odds ratio (OR) 2.708 (95 % CI 1.041-7.047)]. Forced expiratory flow (FEF) 25-75 % predicted was higher in IL-1RN*1/*1 when compared with *1/*2 (p = 0.013). FEF25-75 % predicted in carriers of haplotype IL-1RN *1/IL-1β T (49.21 ± 10.26) was statistically significantly higher than in carriers of IL-1RN *2/IL-1β T (39.67 ± 12.64) [p = 0

APOC3 rs2070666 Is Associated with the Hepatic Steatosis Independently of PNPLA3 rs738409 in Chinese Han Patients with Nonalcoholic Fatty Liver Diseases.

PubMed

Zhang, Rui-Nan; Zheng, Rui-Dan; Mi, Yu-Qiang; Zhou, Da; Shen, Feng; Chen, Guang-Yu; Zhu, Chan-Yan; Pan, Qin; Fan, Jian-Gao

2016-08-01

The association between nonalcoholic fatty liver disease (NAFLD) and apolipoprotein C3 gene (APOC3) promoter region single-nucleotide polymorphisms (SNPs) rs2854117 and rs2854116 is controversial. The aim of this study was to investigate the relationship between other polymorphisms of APOC3 and NAFLD in Chinese. Fifty-nine liver biopsy-proven NAFLD patients and 72 healthy control subjects were recruited to a cohort representing Chinese Han population. The polymorphisms in the exons and flanking regions of APOC3 and patatin-like phospholipase domain-containing protein 3 (PNPLA3) rs738409 polymorphisms were genotyped. Among the five SNPs (rs4225, rs4520, rs5128, rs2070666, and rs2070667) in APOC3, only rs2070666 (c.179 + 62 T/A) was significantly different in genotype and allele frequency (both p < 0.01) between groups of NAFLD and control. After adjusting for sex, age, serum triglycerides, total cholesterol, body mass index, and the PNPLA3 rs738409 polymorphism, the APOC3 rs2070666 A allele was an independent risk factor for NAFLD with an odds ratio (OR) of 3.683 and 95 % confidence interval (CI) of 1.037-13.084. The APOC3 rs2070666 A allele was linked to the fourth quartile of the controlled attenuation parameter values (OR 2.769, 95 % CI 1.002-7.651) in 131 subjects, and also linked to the significant histological steatosis (OR 4.986, 95 % CI 1.020-24.371), but neither to liver stiffness measurement values nor to hepatic histological activity and fibrosis in NAFLD patients. The APOC3 rs2070666 A allele is a risk factor for NAFLD independent of obesity, dyslipidemia, and PNPLA3 rs738409, and it might contribute to increased liver fat content in Chinese Han population.

PNPLA3 rs738409 and TM6SF2 rs58542926 variants increase the risk of hepatocellular carcinoma in alcoholic cirrhosis.

PubMed

Falleti, Edmondo; Cussigh, Annarosa; Cmet, Sara; Fabris, Carlo; Toniutto, Pierluigi

2016-01-01

PNPLA3 rs738409 polymorphism is associated with fatty liver disease, alcoholic or non-alcoholic (NAFLD) and hepatocellular carcinoma (HCC). TM6SF2 rs58542926 is clearly associated with NAFLD, but it is not clearly associated with HCC. The relationship between TM6SF2 rs58542926 and HCC and the potential synergistic effect of TM6SF2 and PNPLA3 variants in modifying the risk of HCC are not known. This study assessed the interaction between PNPLA3 rs738409 and TM6SF2 rs58542926 variants in the conditioning of HCC development. A total of 511 cirrhotic patients (44% alcohol-related, 56% viral, 57.5% liver transplanted) were retrospectively investigated for HCC occurrence. PNPLA3 rs734809 and TM6SF2 rs58542926 were genotyped using restriction fragment length polymorphism and real-time allelic discrimination polymerase chain reaction methods. Patients with HCC were more likely to be PNPLA3 rs734809 G/G homozygotes (41/150 vs. 60/361, p=0.009) or TM6SF2 rs58542926 C/T-T/T (27/150 vs. 41/361, p=0.044). The presence of either PNPLA3 G/G or TM6SF2*/T identified high-risk genotypes for HCC, which were strongly associated with HCC (64/150 vs. 93/361, p=0.0002). This association was evident in alcohol-related (p=0.0007) but not in viral cirrhosis. TM6SF2 C/T or T/T in conjunction with PNPLA3 G/G variants may be potential genetic risk factors for developing HCC in alcohol-related cirrhosis. Copyright © 2015 Editrice Gastroenterologica Italiana S.r.l. Published by Elsevier Ltd. All rights reserved.

RS-25D engine

NASA Image and Video Library

2012-01-17

Employees unload a RS25D rocket engine at NASA's John C. Stennis Space Center on Jan. 17. The engine - and 14 others - will be stored at the facility for future testing and use on NASA's new Space Launch System (SLS). The SLS is a new heavy-lift launch vehicle that will expand human presence beyond low-Earth orbit and enable new missions of exploration across the solar system. NASA's Marshall Space Flight Center in Huntsville, Ala., is leading the design and development of the Space Launch System for NASA, including the engine testing program. Delivery of the 15 RS-25 engines will continue throughout the next few months

Relationships between FTO rs9939609, MC4R rs17782313, and PPARγ rs1801282 polymorphisms and the occurrence of selected metabolic and hormonal disorders in middle-aged and elderly men - a preliminary study.

PubMed

Rotter, Iwona; Skonieczna-Żydecka, Karolina; Kosik-Bogacka, Danuta; Adler, Grażyna; Rył, Aleksandra; Laszczyńska, Maria

2016-01-01

Metabolic disorders, including MetS, obesity, and lipid disorders, may be related to genetic factors. Metabolic disorders are associated with decreased TS levels in aging men. The aim of this study was to evaluate the relationship between FTO rs9939609, MC4R rs17782313, and PPARγ rs1801282 polymorphisms and the presence of MetS and its components, the concurrent lipid disorders, as well as sex hormone concentrations. This study involved 272 men of Caucasian descent aged 50-75 years. Lipid profile, including TCh, LDL, HDL, and TG, was evaluated by spectrophotometric method. Anthropometric measurements concerned WC and blood pressure. MetS was diagnosed according to the criteria of the IDF. Sex hormone profile, including TST, FTS, E 2 , DHEAS, and SHBG, was examined using enzyme-linked immunosorbent assay. Polymorphisms within FTO , MC4R , and PPARγ genes were identified using polymerase chain reaction-restriction fragments length polymorphism. This study did not show links between the analyzed genetic polymorphisms and the presence of MetS, T2DM, HT, and obesity. However, higher concentrations of TCh and LDL were found in men with the FTO rs9939609 polymorphism in the recessive mode of inheritance ( P =0.03 and P =0.05, respectively). Lower WC was found to be associated with MC4R rs17782313 gene inherited in the same model ( P =0.005). FTO rs9939609, MC4R rs17782313, and PPARγ rs1801282 polymorphisms seem to have little effect on the incidence of metabolic malfunctions and no effect on androgen-related disorders in the examined middle-aged and elderly men.

Association of the IL6 rs1800796, but not of the IL6 rs1800795, IL6R rs4845617 and rs2228145 polymorphisms with hip fracture in elderly Mexican women.

PubMed

Ponce de León-Suárez, Valeria; Valdés-Flores, Margarita; Miranda-Duarte, Antonio; Ramírez-Pérez, Esperanza; Pérez-Ríos, Alin; Barredo-Prieto, Blanca; Hidalgo-Bravo, Alberto; Casas-Avila, Leonora

2018-04-01

Polymorphisms in Interleukin-6 (IL6) and its receptor (IL6R) have been associated with bone mineral density. In this work, the G-174C and G-572C polymorphisms in IL6, G-208A, and Asp358Ala in IL6R were analyzed in Mexican women with hip fracture. Postmenopausal Mexican women (60 years or over) with hip fragility fracture (77.97 ± 8 years) and without hip fracture (70.5 ± 7.02 years) were genotyped by real-time PCR. The rs1800796 GG genotype was associated with low risk of fracture (p = 0.05), while GC genotype was associated with high risk of fracture [p = 0.047, OR 2.3 (95% CI 1.013-5.2)]. The AA genotype of the rs2228145 SNP (IL6R) was significantly different [p = 0.033, OR 1.94 (95% CI 1.01-3.75)], but when data were adjusted by age and body mass index, there were no differences (p = 0.9). Our results suggest that the IL6 rs1800796 SNP is a good marker for hip fracture risk in Mexican women.

Intercomparisons of high-resolution solar blind Raman lidar atmospheric profiles of water vapor with radiosondes and kytoon

NASA Technical Reports Server (NTRS)

Petri, K.; Salik, A.; Cooney, J.

1986-01-01

A report is given of measurements of atmospheric profiles of water vapor in the boundary layer by use of solar blind Raman lidar. These measurement episodes, occuring twice a day over a two week period, were accompanied by a dense net of supporting measurements. The support included two radiosonde launches per measurement episodes as well as a kytoon support measurement of water vapor using a wet bulb-dry bulb instrument. The kytoon strategy included ten minute stops at strategic altitudes. Additional kytoon measurements included ozone profiles and nephelometric extinction profiles in the visible. Typically, six or seven 1000 shot lidar profile averages were collected during a measurement episode. Overall performance comparisons are provided and intercomparisons between auxiliary measurement devices are presented. Data on the accuracy of the lidar water vapor profiles are presented.

Assessment of Error in Synoptic-Scale Diagnostics Derived from Wind Profiler and Radiosonde Network Data

NASA Technical Reports Server (NTRS)

Mace, Gerald G.; Ackerman, Thomas P.

1996-01-01

A topic of current practical interest is the accurate characterization of the synoptic-scale atmospheric state from wind profiler and radiosonde network observations. We have examined several related and commonly applied objective analysis techniques for performing this characterization and considered their associated level of uncertainty both from a theoretical and a practical standpoint. A case study is presented where two wind profiler triangles with nearly identical centroids and no common vertices produced strikingly different results during a 43-h period. We conclude that the uncertainty in objectively analyzed quantities can easily be as large as the expected synoptic-scale signal. In order to quantify the statistical precision of the algorithms, we conducted a realistic observing system simulation experiment using output from a mesoscale model. A simple parameterization for estimating the uncertainty in horizontal gradient quantities in terms of known errors in the objectively analyzed wind components and temperature is developed from these results.

Determination of IL-1B (rs16944) and IL-6 (rs1800796) genetic polymorphisms in IgA nephropathy in a northwest Chinese Han population.

PubMed

Zhang, Daofa; Xie, Maowei; Yang, Xiaohong; Zhang, Yin; Su, Yan; Wang, Yanni; Huang, Haiyang; Han, Hui; Li, Wenning; Fu, Keying; Su, Huiluan; Xu, Wentan; Han, Yeguang; Wang, Ru; Zhang, Pei; Wu, Wei; Huang, Yun; Chen, Daojun; Jin, Tianbo; Wei, Jiali

2017-09-22

IgA nephropathy (IgAN) is the most common form of primary glomerulonephritis worldwide, but etiology and pathogenesis continue to be poorly understood. Polymorphisms in the cytokine genes may play a role in the etiology and pathogenesis of IgAN. The incidence of different between diverse ethnic groups suggested important genetic influences on its pathogenesis. We genotype 10 single nucleotide polymorphisms (SNPs) in IL-1B and IL-6 gene using Sequenom Mass-ARRAY technology from 417 IgAN patients and 463 healthy controls of the Chinese Han population. We evaluated these SNPs associated with IgAN utilising the chi-square tests and genetic model analysis. We identified that the minor alleles of rs16944 ("A"), rs1800796 ("G") in IL-1B, IL-6 were involved in an increasingly risk of IgAN in allelic model analysis, respectively. The rs16944 in IL-1B and rs1800796 in IL-6 were associated with 1.23-fold (95% CI, 1.02-1.48, P = 0.031) and 1.33-fold (95% CI, 1.11-1.66, P = 0.003) increases in the risk of developing IgAN, respectively. There was only rs1800796 still correlated with IgAN in the allelic model after adjustment by age and gender and the Bonferroni correction. In addition, Haplotype G rs1800796 A rs2069837 G rs2069840 ( P = 0.037) and G rs1800796 A rs2069837 C rs2069840 ( P = 0.042) in IL-6 were considered to be associated with increased IgAN risk. This study verified the IL-6, IL-1B genetic variants polymorphisms contributed to IgAN susceptibility in a Chinese Han population. Although we identified SNPs susceptibility, however, replication studies and functional research are required to confirm the genetic contribution in IgAN.

RS-25 engine

NASA Image and Video Library

2012-04-10

The last of 15 RS-25 rocket engines arrived at Stennis Space Center from Kennedy Space Center in Flordia , on April 10, 2012. The engines will be stored at Stennis until testing begins for the engines to be used on NASA's new Space Launch System.

Improvement of Bone Healing by Neutralization of microRNA-335-5p, but not by Neutralization of microRNA-92A in Bone Marrow Mononuclear Cells Transplanted into a Large Femur Defect of the Rat.

PubMed

Janko, Maren; Dietz, Konstantin; Rachor, Julia; Sahm, Julian; Schroder, Katrin; Schaible, Alexander; Nau, Christoph; Seebach, Caroline; Marzi, Ingo; Henrich, Dirk

2018-04-23

Transplanted bone marrow mononuclear cells (BMC) support the healing of large bone defects. Neutralization of microRNA (MiR) that negatively affects key processes of the reparative response in BMC might help to further improve the beneficial effect of transplanted BMC in bone healing. Hence, the aim of this study was to evaluate if the neutralization of MiR-92A (vascularization) and MiR-335-5p (osteogenic differentiation) in BMC using specific antiMiRs leads to a further improvement of the BMC-supported therapy of large bone defects. BMC transiently transfected with antiMiR- 92A, antiMiR-335, antiMiR-92A, and antiMiR-355 or control antiMiR were seeded on β-TCP (beta-tricalcium phosphate) and placed in a femoral large bone defect (5 mm) in Sprague-Dawley rats. Ultimate load as well as osseous integration of the β-TCP-scaffolds were significantly improved in the antiMiR-335 group compared to the control group after 8 weeks, whereas neutralization of antiMiR-92A lead to an improvement of early vascularization after 1 week, but not to enhanced bone healing after 8 weeks. We demonstrated that the targeted inhibition of MiRs in transplanted BMC is a new approach that enhances BMC-supported bone healing.

Using First Differences to Reduce Inhomogeneity in Radiosonde Temperature Datasets.

NASA Astrophysics Data System (ADS)

Free, Melissa; Angell, James K.; Durre, Imke; Lanzante, John; Peterson, Thomas C.; Seidel, Dian J.

2004-11-01

The utility of a “first difference” method for producing temporally homogeneous large-scale mean time series is assessed. Starting with monthly averages, the method involves dropping data around the time of suspected discontinuities and then calculating differences in temperature from one year to the next, resulting in a time series of year-to-year differences for each month at each station. These first difference time series are then combined to form large-scale means, and mean temperature time series are constructed from the first difference series. When applied to radiosonde temperature data, the method introduces random errors that decrease with the number of station time series used to create the large-scale time series and increase with the number of temporal gaps in the station time series. Root-mean-square errors for annual means of datasets produced with this method using over 500 stations are estimated at no more than 0.03 K, with errors in trends less than 0.02 K decade-1 for 1960 97 at 500 mb. For a 50-station dataset, errors in trends in annual global means introduced by the first differencing procedure may be as large as 0.06 K decade-1 (for six breaks per series), which is greater than the standard error of the trend. Although the first difference method offers significant resource and labor advantages over methods that attempt to adjust the data, it introduces an error in large-scale mean time series that may be unacceptable in some cases.

Genetic Association for P2X7R rs3751142 and CARD8 rs2043211 Polymorphisms for Susceptibility of Gout in Korean Men: Multi-Center Study.

PubMed

Lee, Sung Won; Lee, Shin Seok; Oh, Dong Ho; Park, Dong Jin; Kim, Hyun Sook; Choi, Jung Ran; Chae, Soo Cheon; Yun, Ki Jung; Chung, Won Tae; Choe, Jung Yoon; Kim, Seong Kyu

2016-10-01

The aim of this study was to determine the association between P2X7R rs3751142 and CARD8 rs2043211 polymorphisms and gout susceptibility in male Korean subjects. This study enrolled a total of 242 male patients with gout and 280 healthy controls. The polymorphisms of two individual genes including rs3751142(C>A) in the P2X7R gene and rs2043211(A>T) in the CARD8 gene were assessed using Taq-Man analysis. Statistical analyses were performed using the Chi-square test, Kruskal-Wallis test, and logistic regression analyses. A difference in genotypic frequency of the P2X7R rs3751142 and CARD8 rs2043211 genes was not detected between gout and control patients. Clinical parameters including age, onset age, disease duration, body mass index, and serum uric acid levels were not different among the three genotypes for either P2X7R or CARD8 (P > 0.05 for all). A pair-wise comparison of P2X7R rs3751142 and CARD8 rs2043211 genotype combinations revealed that subjects with the CA P2X7R rs3751142 genotype and the TT CARD8 rs2043211 genotype had a trend toward a higher risk of gout compared to the CC/AA combination (P = 0.056, OR = 2.618, 95% CI 0.975 - 7.031). In conclusion, this study revealed that genetic variability of the P2X7R rs3751142 and CARD8 rs2043211 genes might, in part, be associated with susceptibility for gout.

[RS3PE syndrome: presentation of two cases].

PubMed

Parra Ródenas, J V; Calvo Catalá, J; González-Cruz Cervellera, M I; Cervera Moscardó, J; Valero Prieto, I

1996-12-01

Recently, the syndrome of remitting seronegative symmetrical synovitis with pitting edema (RS3PE), has been proposed. The RS3PE syndrome has an acute onset, does not produce bony erosions, with a predilection for elderly patients and an excellent prognosis. This condition distinguishing if from rheumatoid arthritis and polymyalgia rheumatica. The purpose is to call attention to a benign forms of arthritis in aging patients. We report two cases of RS3PE syndrome.

The role of apolipoprotein E (rs7412 and rs429358) in age-related macular degeneration.

PubMed

Liutkeviciene, Rasa; Vilkeviciute, Alvita; Smalinskiene, Alina; Tamosiunas, Abdonas; Petkeviciene, Janina; Zaliuniene, Dalia; Lesauskaite, Vaiva

2018-05-31

Age-related macular degeneration (AMD) is the most common cause of incurable visual impairment in the developed countries. The main pathological change in AMD is the formation of drusen containing 40% of lipids, dominated by esterified cholesterol (EC) and phosphatidylcholine (PC), and protein. Haplotype ε4 of apolipoprotein E (ApoE) acts as a ligand for the low-density lipoprotein receptor and is involved in the maintenance and repair of neuronal cell membranes. This study aimed to evaluate the association of AMD with ApoE gene polymorphism variants (rs7412 and rs429358). A total of 2133 subjects were enrolled in our research. The study group comprised patients with early AMD (n = 413) and exudative AMD (n = 307), and the control group enrolled randomly selected persons (n = 1413). The genotyping of ApoE (rs7412 and rs429358) was performed using the real-time polymerase chain reaction (PCR) method. Statistical analysis revealed that ApoE 4/2 genotype was less frequently observed in in older patients with exudative AMD compared to older healthy controls (0.4% vs. 4.0%, p = 0.003). Our data demonstrated that ApoE 4/2 genotype was less frequently observed in old patients (65 years and more) with exudative AMD compared to old healthy controls. It leads to hypothesis on the protective effect of ApoE 4/2 to develop AMD in the elderly.

40 CFR 92.309 - Reports.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 40 Protection of Environment 20 2011-07-01 2011-07-01 false Reports. 92.309 Section 92.309... § 92.309 Reports. (a) Manufacturer or remanufacturers must submit the certification information as required under § 92.306, and end-of-year reports each year as part of their participation in certification...

Analysis of RANKL gene polymorphism (rs9533156 and rs2277438) in Iranian patients with chronic periodontitis and periimplantitis.

PubMed

Kadkhodazadeh, Mahdi; Ebadian, Ahmad Reza; Gholami, Gholam Ali; Khosravi, Alireza; Tabari, Zahra Alizadeh

2013-05-01

RANK/OPG/RANKL pathway plays a significant role in osteoclastogenesis, osteoclast activation, and regulation of bone resorption. The aim of this study was to investigate the association of RANKL gene polymorphisms (rs9533156 and rs2277438) with chronic periodontitis and peri-implantitis in an Iranian population. 77 patients with chronic periodontitis, 40 patients with peri-implantitis and 89 periodontally healthy patients were enrolled in this study. 5cc of blood was obtained from the cephalic vein of subjects arms and transferred into tubes containing EDTA. Genomic DNA was extracted using Miller's Salting Out technique. The DNA was transferred into 96 division plates, transported to Kbioscience Institute in United Kingdom and analyzed using the Kbioscience Competitive Allele Specific PCR (KASP) technique. Differences in the frequencies of genotypes and alleles in the disease and control groups were analyzed using Chi-square and Fisher's exact statistical tests. Comparison of frequency of alleles in SNP rs9533156 of RANKL gene between the chronic periodontitis group with the control and peri-implantitis groups revealed statistically significant differences (P=0.024 and P=0.027, respectively). Comparison of genotype expression of SNP rs9533156 on RANKL gene between the peri-implantitis group with chronic periodontitis and control groups revealed statistically significant differences (P=0.001); the prevalence of CT genotype was significantly higher amongst the chronic periodontitis group. Regarding SNP rs2277438 of RANKL gene, comparison of prevalence of genotypes and frequency of alleles did not reveal any significant differences (P=0.641/P=0.537, respectively). The results of this study indicate that CT genotype of rs9533156 RANKL gene polymorphism was significantly associated with peri-implantitis, and may be considered as a genetic determinant for peri-implantitis. Copyright © 2012 Elsevier Ltd. All rights reserved.

Associations of polymorphisms in the cytokine genes IL1β (rs16944), IL6 (rs1800795), IL12b (rs3212227) and growth factor VEGFA (rs2010963) with anthracosilicosis in coal miners in Russia and related genotoxic effects.

PubMed

Volobaev, Valentin P; Larionov, Aleksey V; Kalyuzhnaya, Ekaterina E; Serdyukova, Ekaterina S; Yakovleva, Svetlana; Druzhinin, Vladimir G; Babich, Olga O; Hill, Elena G; Semenihin, Victor A; Panev, Nikolay I; Minina, Varvara I; Sivanesan, Saravana Devi; Naoghare, Pravin; da Silva, Juliana; Barcelos, Gustavo R M; Prosekov, Alexander Y

2018-04-13

Anthracosilicosis (AS), a prevalent form of pneumoconiosis among coal miners, results from the accumulation of carbon and silica in the lungs from inhaled coal dust. This study investigated genotoxic effects and certain cytokine genes polymorphic variants in Russian coal miners with АS. Peripheral leukocytes were sampled from 129 patients with AS confirmed by X-ray and tissue biopsy and from 164 asymptomatic coal miners. Four single-nucleotide polymorphisms were genotyped in the extracted DNA samples: IL1β T-511C (rs16944), IL6 C-174G (rs1800795), IL12b A1188C (rs3212227) and VEGFA C634G (rs2010963). Genotoxic effects were assessed by the analysis of chromosome aberrations in cultured peripheral lymphocytes. The mean frequency of chromatid-type aberrations and chromosome-type aberrations, namely, chromatid-type breaks and dicentric chromosomes, was found to be higher in AS patients [3.70 (95% confidence interval {CI}, 3.29-4.10) and 0.28 (95% CI, 0.17-0.38)] compared to the control group [2.41 (95% CI, 2.00-2.82) and 0.09 (95% CI, 0.03-0.15)], respectively. IL1β gene T/T genotype (rs16944) was associated with AS [17.83% in AS patients against 4.35% in healthy donors, odds ratio = 4.77 (1.88-12.15), P < 0.01]. A significant increase in the level of certain chromosome interchanges among AS donors is of interest because such effects are typical for radiation damage and caused by acute oxidative stress. IL1β T allele probably may be considered as an AS susceptibility factor among coal miners.

RS Ophiuchi in Quiescence: Why Is It X-ray Faint?

NASA Technical Reports Server (NTRS)

Mukai, Koji

2007-01-01

The short interval between successive outbursts of RS Oph strongly suggests that it has a high mass white dwarf accreting at a high rate. This, in turn, suggests the possibility of prominent X-ray emission from RS Oph in quiescence. However, archival quiescent X-ray observations of RS Oph show it to be a modest soft X-ray source but not a strong 2-10 keV X-ray source. In this aspect, RS Oph differs markedly from T CrB. We speculate on the possible mechanisms that could significantly suppress the 2-10 keV X-ray emission in RS Oph.

10 CFR 434.103 - Referenced standards (RS).

Code of Federal Regulations, 2011 CFR

2011-01-01

... 10 Energy 3 2011-01-01 2011-01-01 false Referenced standards (RS). 434.103 Section 434.103 Energy DEPARTMENT OF ENERGY ENERGY CONSERVATION ENERGY CODE FOR NEW FEDERAL COMMERCIAL AND MULTI-FAMILY HIGH RISE RESIDENTIAL BUILDINGS Administration and Enforcement-General § 434.103 Referenced standards (RS). 103.1The...

10 CFR 434.103 - Referenced standards (RS).

Code of Federal Regulations, 2010 CFR

2010-01-01

... 10 Energy 3 2010-01-01 2010-01-01 false Referenced standards (RS). 434.103 Section 434.103 Energy DEPARTMENT OF ENERGY ENERGY CONSERVATION ENERGY CODE FOR NEW FEDERAL COMMERCIAL AND MULTI-FAMILY HIGH RISE RESIDENTIAL BUILDINGS Administration and Enforcement-General § 434.103 Referenced standards (RS). 103.1The...

Determination of IL-1B (rs16944) and IL-6 (rs1800796) genetic polymorphisms in IgA nephropathy in a northwest Chinese Han population

PubMed Central

Zhang, Yin; Su, Yan; Wang, Yanni; Huang, Haiyang; Han, Hui; Li, Wenning; Fu, Keying; Su, Huiluan; Xu, Wentan; Han, Yeguang; Wang, Ru; Zhang, Pei; Wu, Wei; Huang, Yun; Chen, Daojun; Jin, Tianbo; Wei, Jiali

2017-01-01

IgA nephropathy (IgAN) is the most common form of primary glomerulonephritis worldwide, but etiology and pathogenesis continue to be poorly understood. Polymorphisms in the cytokine genes may play a role in the etiology and pathogenesis of IgAN. The incidence of different between diverse ethnic groups suggested important genetic influences on its pathogenesis. We genotype 10 single nucleotide polymorphisms (SNPs) in IL-1B and IL-6 gene using Sequenom Mass-ARRAY technology from 417 IgAN patients and 463 healthy controls of the Chinese Han population. We evaluated these SNPs associated with IgAN utilising the chi-square tests and genetic model analysis. We identified that the minor alleles of rs16944 (“A”), rs1800796 (“G”) in IL-1B, IL-6 were involved in an increasingly risk of IgAN in allelic model analysis, respectively. The rs16944 in IL-1B and rs1800796 in IL-6 were associated with 1.23-fold (95% CI, 1.02-1.48, P = 0.031) and 1.33-fold (95% CI, 1.11-1.66, P = 0.003) increases in the risk of developing IgAN, respectively. There was only rs1800796 still correlated with IgAN in the allelic model after adjustment by age and gender and the Bonferroni correction. In addition, Haplotype Grs1800796A rs2069837G rs2069840 (P = 0.037) and G rs1800796A rs2069837C rs2069840 (P = 0.042) in IL-6were considered to be associated with increased IgAN risk. This study verified the IL-6, IL-1B genetic variants polymorphisms contributed to IgAN susceptibility in a Chinese Han population. Although we identified SNPs susceptibility, however, replication studies and functional research are required to confirm the genetic contribution in IgAN. PMID:29069743

CCL22 and CCR4 Gene Polymorphisms in Myocardial Infarction: Risk Assessment of rs4359426 and rs2228428 in Iranian Population.

PubMed

Noori, Farideh; Naeimi, Sirous; Zibaeenezhad, Mohammad J; Gharemirshamlu, Fatemeh R

2018-06-01

Myocardial infarction (MI) is an irreversible damage of myocardial tissue caused by prolonged ischemia and hypoxia. A local hypoxia-induced inflammation causes recruitment of leukocytes to the inflammatory site to aid cardiac remodeling and tissue healing. Among various chemokines involved in the process, CCL22 plays an essential role in cardiac cell migrations. In this study, we evaluated the incidence of rs4359426 and rs2228428 SNPs in CCL22/CCR4 genes of MI patients and studied their association with the physiology of the disease. Two hundred patients aged 30 - 70 years diagnosed with myocardial infarction along with 200 agematched healthy controls were registered in the study and their pathophysiological findings were recorded. Genotypic analysis of rs4359426 and rs2228428 in CCL22 and CCR4 genes, respectively, were carried out in patients using PCR-RFLP method and compared with the control group. Successively genotyped SNPs were reviewed for their possible association with the disease or physiological findings using Fisher's exact test. The frequency of CC genotypes atboth SNPs rs4359426 and rs2228428 in CCL22 and CCR4 genes was significantly higher in MI patients compared to other genotypes. Although we could not establish any direct association with the disease due to restricted population size, it is possible that CC genotypesin CCL22 and CCR4 could be considered as risk factors in myocardial infarction.

Association between rs3087243 and rs231775 polymorphism within the cytotoxic T-lymphocyte antigen 4 gene and Graves' disease: a case/control study combined with meta-analyses

PubMed Central

Dai, Yu; Zeng, Tianshu; Xiao, Fei; Chen, Lulu; Kong, Wen

2017-01-01

We conducted a case/control study to assess the impact of SNP rs3087243 and rs231775 within the CTLA4 gene, on the susceptibility to Graves' disease (GD) in a Chinese Han dataset (271 cases and 298 controls). The frequency of G allele for rs3087243 and rs231775 was observed to be significantly higher in subjects with GD than in control subjects (p = 0.005 and p = 0.000, respectively). After logistic regression analysis, a significant association was detected between SNP rs3087243 and GD in the additive and recessive models. Similarly, association for the SNP rs231775 could also be detected in the additive model, dominant model and recessive model. A meta-analysis, including 27 published datasets along with the current dataset, was performed to further confirm the association. Consistent with our case/control results, rs3087243 and rs231775 showed a significant association with GD in all genetic models. Of note, ethnic stratification revealed that these two SNPs were associated with susceptibility to GD in populations of both Asian and European descent. In conclusion, our data support that the rs3087243 and rs231775 polymorphisms within the CTLA4 gene confer genetic susceptibility to GD. PMID:29299173

Polymorphisms rs12998 and rs5780218 in KiSS1 suppressor metastasis gene in Mexican patients with breast cancer.

PubMed

Quevedo, Edhit Guadalupe Cruz; Aguilar, Gabriela Monserrat Mimendi; Aguilar, Luis Anselmo Juárez; Rubio, Susan Andrea Gutierrez; Martínez, Silvia Esperanza Flores; Rodríguez, Ingrid Patricia Dávalos; Corona, José Sánchez; Morán, Martha Isabel Torres; Gómez, Roberto Carlos Rosales; Moguel, María Cristina Morán

2015-01-01

KiSS1 is a metastasis suppressor gene associated with inhibition of cellular chemotaxis and invasion attenuating the metastasis in melanoma and breast cancer cell lines. Along the KiSS-1 gene at least 294 SNPs have been described; however the association of these polymorphisms as genetic markers for metastasis in breast cancer studies has not been investigated. Here we describe two simple PCR-RFLPs protocols to identify the rs5780218 (9DelT) and the rs12998 (E20K) KiSS1 polymorphisms and the allelic, genotypic, and haplotypic frequencies in Mexican general population (GP) and patients with benign breast disease (BBD) or breast cancer (BC). The rs5780218 polymorphism was individually associated with breast cancer (P = 0.0332) and the rs12998 polymorphism shows statistically significant differences when GP versus case (BC and BBD) groups were compared (P < 0.0001). The H1 Haplotype (G/-) occurred more frequently in BC group (0.4256) whereas H2 haplotype (G/T) was the most prevalent in BBD group (0.4674). Our data indicated that the rs5780218 polymorphism individually confers susceptibility for development of breast cancer in Mexican population and a possible role as a genetic marker in breast cancer metastasis for H1 haplotype (Wt/variant) in KiSS1 gene must be analyzed in other populations.

Rare Species (RS)

Treesearch

Steve Sutherland

2006-01-01

The FIREMON Rare Species (RS) method is used to assess changes in uncommon, perennial plant species when other monitoring methods are not effective. This method monitors individual plants and statistically quantifies changes in plant survivorship, growth, and reproduction over time. Plants are spatially located using distance along and from a permanent baseline, and...

RS-34 Phoenix (Peacekeeper Post Boost Propulsion System) Utilization Study

NASA Technical Reports Server (NTRS)

Esther, Elizabeth A.; Kos, Larry; Bruno, Cy

2012-01-01

The Advanced Concepts Office (ACO) at the NASA Marshall Space Flight Center (MSFC) in conjunction with Pratt & Whitney Rocketdyne conducted a study to evaluate potential in-space applications for the Rocketdyne produced RS-34 propulsion system. The existing RS-34 propulsion system is a remaining asset from the decommissioned United States Air Force Peacekeeper ICBM program; specifically the pressure-fed storable bipropellant Stage IV Post Boost Propulsion System, renamed Phoenix. MSFC gained experience with the RS-34 propulsion system on the successful Ares I-X flight test program flown in October 2009. RS-34 propulsion system components were harvested from stages supplied by the USAF and used on the Ares I-X Roll control system (RoCS). The heritage hardware proved extremely robust and reliable and sparked interest for further utilization on other potential in-space applications. Subsequently, MSFC is working closely with the USAF to obtain all the remaining RS-34 stages for re-use opportunities. Prior to pursuit of securing the hardware, MSFC commissioned the Advanced Concepts Office to understand the capability and potential applications for the RS-34 Phoenix stage as it benefits NASA, DoD, and commercial industry. Originally designed, the RS-34 Phoenix provided in-space six-degrees-of freedom operational maneuvering to deploy multiple payloads at various orbital locations. The RS-34 Phoenix Utilization Study sought to understand how the unique capabilities of the RS-34 Phoenix and its application to six candidate missions: 1) small satellite delivery (SSD), 2) orbital debris removal (ODR), 3) ISS re-supply, 4) SLS kick stage, 5) manned GEO servicing precursor mission, and an Earth-Moon L-2 Waypoint mission. The small satellite delivery and orbital debris removal missions were found to closely mimic the heritage RS-34 mission. It is believed that this technology will enable a small, low-cost multiple satellite delivery to multiple orbital locations with a single

RS-34 Phoenix (Peacekeeper Post Boost Propulsion System) Utilization Study

NASA Technical Reports Server (NTRS)

Esther, Elizabeth A.; Kos, Larry; Burnside, Christopher G.; Bruno, Cy

2013-01-01

The Advanced Concepts Office (ACO) at the NASA Marshall Space Flight Center (MSFC) in conjunction with Pratt & Whitney Rocketdyne conducted a study to evaluate potential in-space applications for the Rocketdyne produced RS-34 propulsion system. The existing RS-34 propulsion system is a remaining asset from the de-commissioned United States Air Force Peacekeeper ICBM program, specifically the pressure-fed storable bipropellant Stage IV Post Boost Propulsion System, renamed Phoenix. MSFC gained experience with the RS-34 propulsion system on the successful Ares I-X flight test program flown in October 2009. RS-34 propulsion system components were harvested from stages supplied by the USAF and used on the Ares I-X Roll control system (RoCS). The heritage hardware proved extremely robust and reliable and sparked interest for further utilization on other potential in-space applications. MSFC is working closely with the USAF to obtain RS-34 stages for re-use opportunities. Prior to pursuit of securing the hardware, MSFC commissioned the Advanced Concepts Office to understand the capability and potential applications for the RS-34 Phoenix stage as it benefits NASA, DoD, and commercial industry. As originally designed, the RS-34 Phoenix provided in-space six-degrees-of freedom operational maneuvering to deploy multiple payloads at various orbital locations. The RS-34 Phoenix Utilization Study sought to understand how the unique capabilities of the RS-34 Phoenix and its application to six candidate missions: 1) small satellite delivery (SSD), 2) orbital debris removal (ODR), 3) ISS re-supply, 4) SLS kick stage, 5) manned GEO servicing precursor mission, and an Earth-Moon L-2 Waypoint mission. The small satellite delivery and orbital debris removal missions were found to closely mimic the heritage RS-34 mission. It is believed that this technology will enable a small, low-cost multiple satellite delivery to multiple orbital locations with a single boost. For both the small

mir-126 rs4636297 and TGFβRI rs334348 functional gene variants are associated with susceptibility to endometriosis and its severity.

PubMed

Sepahi, Neda; Kohan, Leila; Jahromi, Athar Rasekh; Daneshbod, Yahya; Hoveidi, Elahe Nimi

2017-06-01

microRNAs (miRNAs) are negative regulators in a variety of cellular processes that occur in endometriosis. Therefore, functional polymorphisms in miRNA and miRNA binding sites may affect gene expression and contribute to susceptibility of endometriosis. In this study, we evaluated the association of two miRNA related polymorphisms, mir-126 rs4636297 and TGFβRI rs334348, with endometriosis risk and its severity. This case-control study was done on 157 endometriosis patients and 252 healthy women as a control group. Tetra amplification refractory mutation system-polymerase chain reaction (tetra-ARMS PCR) was designed to determine the polymorphisms. Our finding showed significant differences in genotype frequency of mir-126 rs4636297 between the groups (χ 2  = 6.26, p = 0.044). A significant protection against endometriosis was found for mir-126 rs4636297 in allele (G versus A allele: OR = 0.695, 95% CI = 0.519-0.931, p = 0.015) and genotype (GG versus AA genotype: OR = 0.451, 95%CI = 0.233-0.873, p = 0.018). Significant association was also observed between the A allele and severity of endometriosis (OR = 0.478, 95%CI = 0.297-0.768, p = 0.002). Moreover, we found a significant association between AA genotype with the risk of endometriosis (OR = 0.493, 95%CI = 0.250-0.970, p = 0.041) and its severity (OR = 0.240, 95%CI = 0.065-0.883, p = 0.032) regarding TGFβRI rs334348 polymorphism. These finding suggest that, for the first time, mir-126 rs4636297 and TGFβRI rs334348 polymorphisms may influence individual's susceptibility to endometriosis and its severity.

Clinical dose effect and functional consequences of R92Q in two families presenting with a TRAPS/PFAPA-like phenotype.

PubMed

Grandemange, Sylvie; Cabasson, Sébastien; Sarrabay, Guillaume; Pène, Jérôme; Rittore, Cécile; Sanchez, Elodie; Chastang, Marie-Caroline; Guyon, Gaël; Pillet, Pascal; Touitou, Isabelle

2017-03-01

TNF receptor-associated syndrome (TRAPS) is a dominantly inherited autoinflammatory condition caused by mutations in the TNFRSF1A gene. The mechanism underlying the variable expressivity of the common variant R92Q (rs4149584; c.362G>A; p.Arg121Gln) is unclear and is of critical importance for patient care and genetic counseling. This study evaluated the impact of the number of R92Q mutations in two unique unrelated families. Two patients with undefined but clear autoinflammatory symptoms were referred for genetic diagnosis. Blood samples were collected from the available family members to screen autoinflammatory genes and assess key steps of the TNFR1-mediated signaling pathway using flow cytometry and ex vivo culture. R92Q homozygosity was demonstrated for the two probands. In family 1, the segregation analysis revealed TRAPS-like symptoms in all carriers, with a more severe presentation in the proband, whereas in family 2, the heterozygous parents were totally asymptomatic, suggesting recessive transmission. Functional studies revealed a nonclassical pathogenesis of TRAPS in the two probands and suggested a compensatory mechanism without clear dose effect. We observed for the first time a possible clinical dose effect of R92Q. This work highlights the importance of familial studies to reconcile the contradictory reports published on the pathogenicity of this variant.

Association analysis of SLC30A8 rs13266634 and rs16889462 polymorphisms with type 2 diabetes mellitus and repaglinide response in Chinese patients.

PubMed

Huang, Qiong; Yin, Ji-Ye; Dai, Xing-Ping; Wu, Jing; Chen, Xiang; Deng, Cai-Shu; Yu, Min; Gong, Zhi-Cheng; Zhou, Hong-Hao; Liu, Zhao-Qian

2010-12-01

Genome-wide association studies (GWASs) identified that SLC30A8 genetic polymorphism was a risk of type 2 diabetes mellitus (T2DM) in several populations. This study aimed to investigate whether the SLC30A8 rs13266634 and rs16889462 polymorphisms were associated with T2DM susceptibility and repaglinide therapeutic efficacy in Chinese T2DM patients. We conducted a case-control study of 443 T2DM patients and 229 healthy volunteers to identify SLC30A8 rs13266634 and rs16889462 genotypes by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) assay. Forty-eight patients were randomly selected and underwent an 8-week repaglinide treatment (3 mg/d). Fasting plasma glucose (FPG), postprandial plasma glucose (PPG), glycated hemoglobin (HbAlc), fasting serum insulin (FINS), postprandial serum insulin (PINS), homeostasis model assessment for insulin resistance (HOMA-IR), serum triglyceride, total cholesterol (TC), low-density lipoprotein-cholesterol (LDL-c) and high-density lipoprotein-cholesterol (HDL-c) were determined before and after repaglinide treatment. SLC30A8 rs13266634 risk C allele frequency was higher in T2DM patients than in healthy controls (P < 0.05). There was a better repaglinide response on FINS (P < 0.05) and PINS (P < 0.01) in patients with rs13266634 CT+TT genotypes compared with CC genotype carriers. Patients with rs16889462 GA genotype showed an enhanced repaglinide efficacy on FPG (P < 0.01), PPG (P < 0.01) and HbAlc (P < 0.05) compared with GG genotype individuals. SLC30A8 rs13266634 and rs16889462 polymorphisms were associated with repaglinide therapeutic efficacy in Chinese T2DM patients.

A comparison of RS4-type resistant starch to RS2-type resistant starch in suppressing oxidative stress in high-fat-diet-induced obese rats.

PubMed

Si, Xu; Zhou, Zhongkai; Strappe, Padraig; Blanchard, Chris

2017-01-25

The anti-obesity effects of two types of resistant starch (RS) in high-fat-diet-induced obese rats were investigated. The serum triglycerides, total cholesterol and malondialdehyde concentrations were significantly reduced, and the total antioxidant capacity, superoxide dismutase levels and glutathione peroxidase activity were increased by RS2 and RS4 consumption compared to the obesity group. A significant reduction in the serum glucose level and elevations in hepatic lipid metabolic enzyme activities were observed only for RS4 administration. Moreover, the expression levels of the fatty acid synthesis associated genes ACC and Fads1, the triglyceride synthesis and metabolism-related gene SREBP-1, the adipocyte differentiation gene PPARγ, the cholesterol synthesis associated gene HMGCR, and the gluconeogenesis associated gene GAPDH were all significantly down-regulated, whilst the lipid oxidation gene Acox1 and the liver function genes Gsta2, Nqo1, and Gclm were up-regulated in both administered groups. Additionally, RS4 performed well in up-regulating the expressions of Gsta2, Gsta3, Nqo1, and Egfr, and down-regulating LXRα, Igfbp1, and Pml. RS4 exhibited great advantages in reducing oxidative stress compared with RS2.

29 CFR 1915.92 - Illumination.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 29 Labor 7 2010-07-01 2010-07-01 false Illumination. 1915.92 Section 1915.92 Labor Regulations Relating to Labor (Continued) OCCUPATIONAL SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR (CONTINUED) OCCUPATIONAL SAFETY AND HEALTH STANDARDS FOR SHIPYARD EMPLOYMENT General Working Conditions § 1915.92...

The optimal algorithm for Multi-source RS image fusion.

PubMed

Fu, Wei; Huang, Shui-Guang; Li, Zeng-Shun; Shen, Hao; Li, Jun-Shuai; Wang, Peng-Yuan

2016-01-01

In order to solve the issue which the fusion rules cannot be self-adaptively adjusted by using available fusion methods according to the subsequent processing requirements of Remote Sensing (RS) image, this paper puts forward GSDA (genetic-iterative self-organizing data analysis algorithm) by integrating the merit of genetic arithmetic together with the advantage of iterative self-organizing data analysis algorithm for multi-source RS image fusion. The proposed algorithm considers the wavelet transform of the translation invariance as the model operator, also regards the contrast pyramid conversion as the observed operator. The algorithm then designs the objective function by taking use of the weighted sum of evaluation indices, and optimizes the objective function by employing GSDA so as to get a higher resolution of RS image. As discussed above, the bullet points of the text are summarized as follows.•The contribution proposes the iterative self-organizing data analysis algorithm for multi-source RS image fusion.•This article presents GSDA algorithm for the self-adaptively adjustment of the fusion rules.•This text comes up with the model operator and the observed operator as the fusion scheme of RS image based on GSDA. The proposed algorithm opens up a novel algorithmic pathway for multi-source RS image fusion by means of GSDA.

Impact of Uncertainties and Errors in Converting NWS Radiosonde Hygristor Resistances to Relative Humidity

NASA Technical Reports Server (NTRS)

Westphal, Douglas L.; Russell, Philip (Technical Monitor)

1994-01-01

A set of 2,600 6-second, National Weather Service soundings from NASA's FIRE-II Cirrus field experiment are used to illustrate previously known errors and new potential errors in the VIZ and SDD brand relative humidity (RH) sensors and the MicroART processing software. The entire spectrum of RH is potentially affected by at least one of these errors. (These errors occur before being converted to dew point temperature.) Corrections to the errors are discussed. Examples are given of the effect that these errors and biases may have on numerical weather prediction and radiative transfer. The figure shows the OLR calculated for the corrected and uncorrected soundings using an 18-band radiative transfer code. The OLR differences are sufficiently large to warrant consideration when validating line-by-line radiation calculations that use radiosonde data to specify the atmospheric state, or when validating satellite retrievals. In addition, a comparison of observations of RE during FIRE-II derived from GOES satellite, raman lidar, MAPS analyses, NCAR CLASS sondes, and the NWS sondes reveals disagreement in the RH distribution and underlines our lack of an understanding of the climatology of water vapor.

Impact of Uncertainties and Errors in Converting NWS Radiosonde Hygristor Resistances to Relative Humidity

NASA Technical Reports Server (NTRS)

Westphal, Douglas L.; Russell, Philip B. (Technical Monitor)

1994-01-01

A set of 2,600 6-second, National Weather Service soundings from NASA's FIRE-II Cirrus field experiment are used to illustrate previously known errors and new potential errors in the VIZ and SDD ) brand relative humidity (RH) sensors and the MicroART processing software. The entire spectrum of RH is potentially affected by at least one of these errors. (These errors occur before being converted to dew point temperature.) Corrections to the errors are discussed. Examples are given of the effect that these errors and biases may have on numerical weather prediction and radiative transfer. The figure shows the OLR calculated for the corrected and uncorrected soundings using an 18-band radiative transfer code. The OLR differences are sufficiently large to warrant consideration when validating line-by-line radiation calculations that use radiosonde data to specify the atmospheric state, or when validating satellite retrievals. in addition, a comparison of observations of RH during FIRE-II derived from GOES satellite, raman lidar, MAPS analyses, NCAR CLASS sondes, and the NWS sondes reveals disagreement in the RH distribution and underlines our lack of an understanding of the climatology of water vapor.

28 CFR 92.7 - Scope.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 28 Judicial Administration 2 2013-07-01 2013-07-01 false Scope. 92.7 Section 92.7 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.7 Scope. (a) The Police Recruitment program offers funds to qualified...

28 CFR 92.1 - Scope.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 28 Judicial Administration 2 2012-07-01 2012-07-01 false Scope. 92.1 Section 92.1 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Corps Eligibility and Selection Criteria § 92.1 Scope. This subpart sets forth guidance on the...

28 CFR 92.7 - Scope.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 28 Judicial Administration 2 2011-07-01 2011-07-01 false Scope. 92.7 Section 92.7 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.7 Scope. (a) The Police Recruitment program offers funds to qualified...

28 CFR 92.7 - Scope.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 28 Judicial Administration 2 2014-07-01 2014-07-01 false Scope. 92.7 Section 92.7 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.7 Scope. (a) The Police Recruitment program offers funds to qualified...

28 CFR 92.7 - Scope.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 28 Judicial Administration 2 2012-07-01 2012-07-01 false Scope. 92.7 Section 92.7 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.7 Scope. (a) The Police Recruitment program offers funds to qualified...

28 CFR 92.1 - Scope.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 28 Judicial Administration 2 2011-07-01 2011-07-01 false Scope. 92.1 Section 92.1 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Corps Eligibility and Selection Criteria § 92.1 Scope. This subpart sets forth guidance on the...

28 CFR 92.1 - Scope.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 28 Judicial Administration 2 2013-07-01 2013-07-01 false Scope. 92.1 Section 92.1 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Corps Eligibility and Selection Criteria § 92.1 Scope. This subpart sets forth guidance on the...

28 CFR 92.1 - Scope.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 28 Judicial Administration 2 2014-07-01 2014-07-01 false Scope. 92.1 Section 92.1 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Corps Eligibility and Selection Criteria § 92.1 Scope. This subpart sets forth guidance on the...

24 CFR 92.606 - Reallocations.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Reallocations. 92.606 Section 92.606 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.606 Reallocations. If...

22 CFR 9.2 - Objective.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 22 Foreign Relations 1 2011-04-01 2011-04-01 false Objective. 9.2 Section 9.2 Foreign Relations DEPARTMENT OF STATE GENERAL SECURITY INFORMATION REGULATIONS § 9.2 Objective. The objective of the Department's classification program is to ensure that national security information is protected from...

24 CFR 92.606 - Reallocations.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 24 Housing and Urban Development 1 2013-04-01 2013-04-01 false Reallocations. 92.606 Section 92.606 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.606 Reallocations. If...

24 CFR 92.606 - Reallocations.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 24 Housing and Urban Development 1 2012-04-01 2012-04-01 false Reallocations. 92.606 Section 92.606 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.606 Reallocations. If...

24 CFR 92.606 - Reallocations.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 24 Housing and Urban Development 1 2011-04-01 2011-04-01 false Reallocations. 92.606 Section 92.606 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.606 Reallocations. If...

24 CFR 92.606 - Reallocations.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 24 Housing and Urban Development 1 2014-04-01 2014-04-01 false Reallocations. 92.606 Section 92.606 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.606 Reallocations. If...

22 CFR 9.2 - Objective.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 22 Foreign Relations 1 2010-04-01 2010-04-01 false Objective. 9.2 Section 9.2 Foreign Relations DEPARTMENT OF STATE GENERAL SECURITY INFORMATION REGULATIONS § 9.2 Objective. The objective of the Department's classification program is to ensure that national security information is protected from...

24 CFR 92.506 - Audit.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Audit. 92.506 Section 92.506 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Program Administration § 92.506 Audit. Audits of the participating...

Quantitative evaluation of pairs and RS steganalysis

NASA Astrophysics Data System (ADS)

Ker, Andrew D.

2004-06-01

We give initial results from a new project which performs statistically accurate evaluation of the reliability of image steganalysis algorithms. The focus here is on the Pairs and RS methods, for detection of simple LSB steganography in grayscale bitmaps, due to Fridrich et al. Using libraries totalling around 30,000 images we have measured the performance of these methods and suggest changes which lead to significant improvements. Particular results from the project presented here include notes on the distribution of the RS statistic, the relative merits of different "masks" used in the RS algorithm, the effect on reliability when previously compressed cover images are used, and the effect of repeating steganalysis on the transposed image. We also discuss improvements to the Pairs algorithm, restricting it to spatially close pairs of pixels, which leads to a substantial performance improvement, even to the extent of surpassing the RS statistic which was previously thought superior for grayscale images. We also describe some of the questions for a general methodology of evaluation of steganalysis, and potential pitfalls caused by the differences between uncompressed, compressed, and resampled cover images.

RS3PE revealing recurrent non-Hodgkin's lymphoma.

PubMed

Gisserot, Olivier; Crémades, Serge; Landais, Cécile; Leyral, Guénaelle; Bernard, Philippe; de Jauréguiberry, Jean-Pierre

2004-09-01

A patient meeting published criteria for remitting seronegative symmetrical synovitis with pitting edema (RS3PE) was found to have a synchronous recurrence of non-Hodgkin's malignant lymphoma. Reported cases of RS3PE associated with hematological malignancies and other forms of cancer are reviewed.

Mesoscale kinematics derived from X-band Doppler radar observations of convective versus stratiform precipitation and comparison with GPS radiosonde profiles

NASA Astrophysics Data System (ADS)

Deshpande, Sachin M.; Dhangar, N.; Das, S. K.; Kalapureddy, M. C. R.; Chakravarty, K.; Sonbawne, S.; Konwar, M.

2015-11-01

Single Doppler analysis techniques known as velocity azimuth display (VAD) and volume velocity processing (VVP) are used to analyze kinematics of mesoscale flow such as horizontal wind and divergence using X-band Doppler weather radar observations, for selected cases of convective, stratiform, and shallow cloud systems near tropical Indian sites Pune (18.58°N, 73.92°E, above sea level (asl) 560 m) and Mandhardev (18.51°N, 73.85°E, asl 1297 m). The vertical profiles of horizontal wind estimated from radar VVP/VAD methods agree well with GPS radiosonde profiles, with the low-level jet at about 1.5 km during monsoon season well depicted in both. The vertical structure and temporal variability of divergence and reflectivity profiles are indicative of the dynamical and microphysical characteristics of shallow convective, deep convective, and stratiform cloud systems. In shallow convective systems, vertical development of reflectivity profiles is limited below 5 km. In deep convective systems, reflectivity values as large as 55 dBZ were observed above freezing level. The stratiform system shows the presence of a reflectivity bright band (~35 dBZ) near the melting level. The diagnosed vertical profiles of divergence in convective and stratiform systems are distinct. In shallow convective conditions, convergence was seen below 4 km with divergence above. Low-level convergence and upper level divergence are observed in deep convective profiles, while stratiform precipitation has midlevel convergence present between lower level and upper level divergence. The divergence profiles in stratiform precipitation exhibit intense shallow layers of "melting convergence" at 0°C level, near 4.5 km altitude, with a steep gradient on the both sides of the peak. The level of nondivergence in stratiform situations is lower than that in convective situations. These observed vertical structures of divergence are largely indicative of latent heating profiles in the atmosphere, an

45 CFR 92.30 - Changes.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 45 Public Welfare 1 2010-10-01 2010-10-01 false Changes. 92.30 Section 92.30 Public Welfare... AND COOPERATIVE AGREEMENTS TO STATE, LOCAL, AND TRIBAL GOVERNMENTS Post-Award Requirements Changes, Property, and Subawards § 92.30 Changes. (a) General. Grantees and subgrantees are permitted to rebudget...

44 CFR 9.2 - Policy.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 44 Emergency Management and Assistance 1 2011-10-01 2011-10-01 false Policy. 9.2 Section 9.2 Emergency Management and Assistance FEDERAL EMERGENCY MANAGEMENT AGENCY, DEPARTMENT OF HOMELAND SECURITY GENERAL FLOODPLAIN MANAGEMENT AND PROTECTION OF WETLANDS § 9.2 Policy. (a) FEMA shall take no action...

Mass and Reliability Source (MaRS) Database

NASA Technical Reports Server (NTRS)

Valdenegro, Wladimir

2017-01-01

The Mass and Reliability Source (MaRS) Database consolidates components mass and reliability data for all Oribital Replacement Units (ORU) on the International Space Station (ISS) into a single database. It was created to help engineers develop a parametric model that relates hardware mass and reliability. MaRS supplies relevant failure data at the lowest possible component level while providing support for risk, reliability, and logistics analysis. Random-failure data is usually linked to the ORU assembly. MaRS uses this data to identify and display the lowest possible component failure level. As seen in Figure 1, the failure point is identified to the lowest level: Component 2.1. This is useful for efficient planning of spare supplies, supporting long duration crewed missions, allowing quicker trade studies, and streamlining diagnostic processes. MaRS is composed of information from various databases: MADS (operating hours), VMDB (indentured part lists), and ISS PART (failure data). This information is organized in Microsoft Excel and accessed through a program made in Microsoft Access (Figure 2). The focus of the Fall 2017 internship tour was to identify the components that were the root cause of failure from the given random-failure data, develop a taxonomy for the database, and attach material headings to the component list. Secondary objectives included verifying the integrity of the data in MaRS, eliminating any part discrepancies, and generating documentation for future reference. Due to the nature of the random-failure data, data mining had to be done manually without the assistance of an automated program to ensure positive identification.

32 CFR 728.92 - Policy.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 32 National Defense 5 2012-07-01 2012-07-01 false Policy. 728.92 Section 728.92 National Defense Department of Defense (Continued) DEPARTMENT OF THE NAVY PERSONNEL MEDICAL AND DENTAL CARE FOR ELIGIBLE PERSONS AT NAVY MEDICAL DEPARTMENT FACILITIES Adjuncts to Medical Care § 728.92 Policy. (a) Provide...

Distinct role of the Fas rs1800682 and FasL rs763110 polymorphisms in determining the risk of breast cancer among Han Chinese females.

PubMed

Wang, Meng; Wang, Zheng; Wang, Xi-Jing; Jin, Tian-Bo; Dai, Zhi-Ming; Kang, Hua-Feng; Guan, Hai-Tao; Ma, Xiao-Bin; Liu, Xing-Han; Dai, Zhi-Jun

2016-01-01

In recent years, studies have demonstrated that polymorphisms in the promoters of Fas and FasL are significantly associated with breast cancer risk. However, the results of these studies were inconsistent. This case-control study was performed to explore the associations between Fas rs1800682 and FasL rs763110 polymorphisms and breast cancer. A hospital-based case-control study of 560 Han Chinese females with breast cancer (583 controls) was conducted. The MassARRAY system was used to search for a possible association between the disease risk and the two single nucleotide polymorphisms, Fas rs1800682 and FasL rs763110. Statistical analyses were performed using SNPStats software to conduct Pearson's chi-square tests in five different genetic models. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated after adjustment to age and body mass index. PHASE v2.1 software was used to reconstruct all common haplotypes. A statistically significant association was found between Fas rs1800682 and increased breast cancer risk (AG vs AA: OR =1.37, 95% CI =1.06-1.78; AA+AG vs GG: OR =1.32, 95% CI =1.04-1.66), and also it was found that the FasL rs763110 polymorphism may decrease the risk. Stratified analyses demonstrated that the rs763110 polymorphism was associated with lower breast cancer risk among postmenopausal females (heterozygote model: OR =0.69, 95% CI =0.49-0.97; dominant model: OR =0.70, 95% CI =0.51-0.96). The T allele of rs763110 was also associated with a decreased risk of lymph node metastasis (allele model: OR =0.75, 95% CI =0.57-0.97) and an increased risk of the breast cancer being human epidermal growth factor receptor 2 positive (allele model: OR =1.37, 95% CI =1.03-1.18). Moreover, haplotype analysis showed that Ars1800682Trs763110 was associated to a statistically significant degree with lower risk of breast cancer (OR =0.70, 95% CI =0.53-0.91). These data suggest that the presence of Fas rs1800683 is an important risk factor for breast

RS-84 Engine Completes Design Review

NASA Technical Reports Server (NTRS)

2003-01-01

This is an artist's concept of the kerosene-fueled RS-84 engine, one of several technologies competing to power NASA's next generation of launch vehicles. The RS-84 has successfully completed its preliminary design review as a reusable, liquid kerosene booster engine that will deliver a thrust level of 1 million pounds of force. The preliminary design review is a lengthy technical analysis that evaluates engine design according to stringent system requirements. The review ensures development is on target to meet Next Generation Launch Technology goals: Improved safety, reliability, and cost.

45 CFR 92.32 - Equipment.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 45 Public Welfare 1 2011-10-01 2011-10-01 false Equipment. 92.32 Section 92.32 Public Welfare..., Property, and Subawards § 92.32 Equipment. (a) Title. Subject to the obligations and conditions set forth in this section, title to equipment acquired under a grant or subgrant will vest upon acquisition in...

27 CFR 9.92 - Madera.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false Madera. 9.92 Section 9.92... TREASURY LIQUORS AMERICAN VITICULTURAL AREAS Approved American Viticultural Areas § 9.92 Madera. (a) Name. The name of the viticultural area described in this section is “Madera.” (b) Approved maps. The...

27 CFR 9.92 - Madera.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 27 Alcohol, Tobacco Products and Firearms 1 2011-04-01 2011-04-01 false Madera. 9.92 Section 9.92... TREASURY LIQUORS AMERICAN VITICULTURAL AREAS Approved American Viticultural Areas § 9.92 Madera. (a) Name. The name of the viticultural area described in this section is “Madera.” (b) Approved maps. The...

15 CFR 9.2 - Definitions.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 15 Commerce and Foreign Trade 1 2010-01-01 2010-01-01 false Definitions. 9.2 Section 9.2 Commerce and Foreign Trade Office of the Secretary of Commerce PROCEDURES FOR A VOLUNTARY LABELING PROGRAM FOR HOUSEHOLD APPLIANCES AND EQUIPMENT TO EFFECT ENERGY CONSERVATION § 9.2 Definitions. (a) The term Secretary...

49 CFR 92.23 - Collection.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 49 Transportation 1 2010-10-01 2010-10-01 false Collection. 92.23 Section 92.23 Transportation Office of the Secretary of Transportation RECOVERING DEBTS TO THE UNITED STATES BY SALARY OFFSET § 92.23 Collection. (a) A debt shall be collected in a lump sum or by installment deductions at officially...

50 CFR 92.2 - Authority.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 6 2010-10-01 2010-10-01 false Authority. 92.2 Section 92.2 Wildlife and... PROVISIONS MIGRATORY BIRD SUBSISTENCE HARVEST IN ALASKA General Provisions § 92.2 Authority. The Secretary of the Interior issues the regulations in this part under the authority granted to the Secretary by the...

45 CFR 92.33 - Supplies.

Code of Federal Regulations, 2010 CFR

2010-10-01

... residual inventory of unused supplies exceeding $5,000 in total aggregate fair market value upon... 45 Public Welfare 1 2010-10-01 2010-10-01 false Supplies. 92.33 Section 92.33 Public Welfare..., Property, and Subawards § 92.33 Supplies. (a) Title. Title to supplies acquired under a grant or subgrant...

6 CFR 9.2 - Definitions.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 6 Domestic Security 1 2010-01-01 2010-01-01 false Definitions. 9.2 Section 9.2 Domestic Security DEPARTMENT OF HOMELAND SECURITY, OFFICE OF THE SECRETARY RESTRICTIONS UPON LOBBYING General § 9.2 Definitions... included under the definition of Indian tribe in that Act. (h) Influencing or attempting to influence means...

Polymorphisms of the peroxisome proliferator-activated receptor-γ (rs1801282) and its coactivator-1 (rs8192673) are associated with obesity indexes in subjects with type 2 diabetes mellitus.

PubMed

Kruzliak, Peter; Haley, Andreana P; Starcevic, Jovana Nikolajevic; Gaspar, Ludovit; Petrovic, Daniel

2015-04-28

The aim of this study was to clarify whether common single nucleotide polymorphisms (SNPs) of the Peroxisome Proliferator-Activated Receptor-γ (PPAR-γ) gene (rs1801282) and the Peroxisome Proliferator-Activated Receptor-γ Coactivator-1 (PGC-1α) gene (rs8192673) are associated with obesity indexes (BMI, waist circumference) in subjects with type 2 diabetes mellitus (T2DM) in Caucasian population. The second aim was to find an association of both polymorphisms with T2DM. Two exonic SNPs of both genes rs1801282 of the PPAR-γ gene and rs8192673 of the PGC-1α gene) were genotyped in 881 unrelated Slovene subjects (Caucasians) with T2DM and in 348 subjects without T2DM (control subjects). Female homozygotes with the CC genotype of the rs8192673 had higher waist circumference in comparison with subjects with other genotypes. Homozygotes (females, males) with wild allele (Pro) of the rs1801282 (Pro12Ala polymorphism) had higher waist circumference in comparison with subjects with other genotypes. In the study, there were no differences in the distributions of the rs8192673 and the rs1801282 genotypes between patients with T2DM and controls. Linear regression analyses for both polymorphisms were performed and demonstrated an independent effect of the rs1801282 of the PPAR-γ on waist circumference in subjects with T2DM, whereas an independent effect on waist circumference was not demonstrated for the rs8192673 of the PGC-1α gene. In a large sample of the Caucasians the rs8192673 of the PGC-1α gene and the rs1801282 of the PPAR-γ gene were associated with waist circumference in subjects with T2DM.

Increased vitamin D receptor gene expression and rs11568820 and rs4516035 promoter polymorphisms in autistic disorder.

PubMed

Balta, Burhan; Gumus, Hakan; Bayramov, Ruslan; Korkmaz Bayramov, Keziban; Erdogan, Murat; Oztop, Didem Behice; Dogan, Muhammet Ensar; Taheri, Serpil; Dundar, Munis

2018-05-18

Although there are a large number of sequence variants of different genes and copy number variations at various loci identified in autistic disorder (AD) patients, the pathogenesis of AD has not been elucidated completely. Recently, in AD patients, a large number of expression array and transcriptome studies have shown an increase in the expression of genes especially related to innate immune response. Antimicrobial effects of vitamin D and VDR are exerted through Toll-Like-Receptors (TLR) which have an important role in the innate immune response, are expressed by antigen presenting cells and recognize foreign microorganisms. In this study, age and gender matched 30 patients diagnosed with AD and 30 healthy controls were included in the study. Comparatively whole blood VDR gene expression and rs11568820 and rs4516035 SNP profile of the promoter region of the VDR gene were investigated by real time PCR. Whole blood VDR gene expression was significantly higher in the AD group compared to control subjects (p < 0.0001). There were no significant differences among allele and genotype distribution of rs11568820 and rs4516035 polymorphisms between AD patients and controls. The increase of VDR gene expression in patients with AD may be in accordance with an increase in the innate immune response in patients with AD. Furthermore, this study will stimulate new studies in order to clarify the relationship among AD, vitamin D, VDR, and innate immunity.

44 CFR 9.2 - Policy.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 44 Emergency Management and Assistance 1 2013-10-01 2013-10-01 false Policy. 9.2 Section 9.2... GENERAL FLOODPLAIN MANAGEMENT AND PROTECTION OF WETLANDS § 9.2 Policy. (a) FEMA shall take no action unless and until the requirements of this regulation are complied with. (b) It is the policy of the...

Association of ADORA1 rs2228079 and ADORA2A rs5751876 Polymorphisms with Gilles de la Tourette Syndrome in the Polish Population

PubMed Central

Safranow, Krzysztof; Żekanowski, Cezary

2015-01-01

Background Gilles de la Tourette syndrome (GTS) is a neurodevelopmental disorder characterized by motor and vocal tics. Hyperactivity of dopaminergic transmission is considered a prime abnormality in the pathophysiology of tics. There are reciprocal antagonistic interactions between adenosine and dopamine transmission. The aim of the study was to analyze the association of two polymorphisms, rs2228079 in ADORA1 and rs5751876 in ADORA2A, with the risk of GTS and co-morbid disorders. Material and Methods A total of 162 Polish GTS patients and 270 healthy persons were enrolled in the study. Two polymorphisms were selected on the basis of knowledge of SNPs frequencies in ADORA1 and ADORA2A. Chi-square test was used for allelic and genotypic association studies. Association of genotypes with age of tic onset was analyzed with Mann-Whitney test. Multivariate logistic regression was used to find independent predictors of GTS risk. Results We found that the risk of GTS was associated with rs2228079 and rs5751876 polymorphisms. The GG+GT genotypes of rs2228079 in ADORA1 were underrepresented in GTS patients (p = 0.011), whereas T allele of rs5751876 in ADORA2A was overrepresented (p = 0.017). The GG genotype of rs2228079 was associated with earlier age of tic onset (p = 0.046). We found also that the minor allele G of rs2228079 was more frequent in GTS patients with depression as compared to the patients without depression (p = 0.015). Also the genotype GG was significantly more frequent in patients with obsessive compulsive disorder/behavior (OCD/OCB, p = 0.021) and depression (p = 0.032), as compared to the patients without these co-morbidities. The minor allele T frequency of rs5751876 was lower in GTS patients with co-morbid attention deficit hyperactivity disorder (p = 0.022), and TT+TC genotypes were less frequent in the non-OCD anxiety disorder group (p = 0.045). Conclusion ADORA1 and ADORA2A variants are associated with the risk of GTS, co-morbid disorders, and may

40 CFR 92.6 - Regulatory structure.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 20 2010-07-01 2010-07-01 false Regulatory structure. 92.6 Section 92... Regulations for Locomotives and Locomotive Engines § 92.6 Regulatory structure. This section provides an overview of the regulatory structure of this part. (a) The regulations of this part 92 are intended to...

The IL7RA rs6897932 polymorphism is associated with progression of liver fibrosis in patients with chronic hepatitis C: Repeated measurements design.

PubMed

Jiménez-Sousa, María Ángeles; Gómez-Moreno, Ana Zaida; Pineda-Tenor, Daniel; Medrano, Luz Maria; Sánchez-Ruano, Juan José; Fernández-Rodríguez, Amanda; Artaza-Varasa, Tomas; Saura-Montalbán, José; Vázquez-Morón, Sonia; Ryan, Pablo; Resino, Salvador

2018-01-01

The polymorphisms at the α-chain of the IL-7 receptor (IL7RA) have been related to T-cell homeostasis and development and may contribute to immune system deregulation. In the present study, we analyzed the association between IL7RA polymorphisms and the progression of liver fibrosis in patients infected with HCV. We carried out a retrospective study with a design consisting of repeated measurements in 187 HCV-infected patients, to study the risk prediction of liver fibrosis progression using genetic factors. We genotyped the rs6897932, rs987106 and rs3194051 IL7RA polymorphisms using the Agena Bioscience's MassARRAY. Transient elastography was used to measure liver stiffness. The used cut-offs were: <7.1 kPa (F0-F1), 7.1-9.4 kPa (F2; significant fibrosis), 9.5-12.4 kPa (F3; advanced fibrosis), and ≥12.5 kPa (F4; cirrhosis). All HCV genotypes were analyzed. The median of follow-up time was 47.9 months. Baseline liver stiffness measurement (LSM) values did not show significant statistical differences for IL7RA genotypes (p>0.05). In univariate analysis, the rs6897932 T allele had a positive relationship with an increase in LSM (arithmetic mean ratio (AMR) = 1.21 (95%CI = 1.08; 1.36); p = 0.001), progression to advanced fibrosis (F≥3) (odds ratio (OR) = 2.51 (95%CI = 1.29; 4.88); p = 0.006) and progression to cirrhosis (F4) (OR = 2.71 (95%CI = 0.94; 5.03); p = 0.069). In multivariable analysis, the rs6897932 T allele was related to a higher increase of LSM values during follow-up (adjusted AMR = 1.27 (95%CI = 1.13; 1.42); p<0.001) and higher odds of progression to advanced fibrosis [adjusted OR = 4.46 (95%CI = 1.87; 10.62); p = 0.001], and progression to cirrhosis [adjusted OR = 3.92 (95%CI = 1.30; 11.77); p = 0.015]. Regarding IL7RA rs987106 and rs3194051 polymorphisms, we did not find significant results except for the relationship between IL7RA rs987106 and the increase in LSM values [adjusted OR = 1.12 (95%CI = 1.02; 1.23); p = 0.015]. The IL7RA rs6897932

Association of Mannose-Binding Lectin rs1800450 and Tumor Necrotic Factor-α rs1800620 Polymorphism with Helicobacter pylori in Type II Diabetes Mellitus.

PubMed

Mortazavi, Elnaz; Eslami, Behnaz; Aghahosseini, Parisa; Ahron, Fatemeh; Amininejad, Armagan; Mahmoodi, Sepideh; Satarpour, Hadis; Radmanesh, Nilofar; Rassi, Hossein

2017-10-01

Type II diabetes mellitus (T2DM) is the prevalent type of diabetes, including 90% of the cases world-wide. Helicobacter pylori plays a pathogenic role in the development of T2DM. The host genetic factors have a significant impact on the clinical outcome and anatomical distribution of H. pylori infection and polymorphisms in several genes such as tumor necrotic factor (TNF)-α and mannose-binding lectin (MBL) and are considered to increase the risk for the development of T2DM. In this study, we investigate the prevalence rate of H. pylori infection and its relationship to MBL rs1800450 and TNF-α rs1800620 polymorphism in T2DM. In this case-control study, 174 patients with type II diabetes and 185 healthy controls were studied. Also, demographics, physical, and biochemical parameters were performed in all patients. The DNA extracted from blood specimens was amplified by H. pylori cagA-specific primers. The MBL rs1800450 and TNF-α rs1800620 genotyping were detected by amplification refractory mutation system-polymerase chain reaction (ARMS-PCR). The results show that H. pylori cagA positivity was detected in 42.82% of the diabetic patients and in 22.16% of the control group, and H. pylori infection was closely correlated with MBL rs1800450 AA genotype and TNF-α rs1800620 GG genotype when compared with healthy controls. Furthermore, these two genotypes were strongly associated with H. pylori cagA(+) samples when compared with cagA(-) samples. In addition, the presence of H. pylori cagA(+) infection was significantly associated with the elevated serum levels of total cholesterol and low-density lipoprotein cholesterol. In general, it can be concluded that molecular analysis of MBL rs1800450 AA genotype and TNF-α rs1800620 AA genotype is important in the early detection and treatment of T2DM with H. pylori cagA(+) infection.

rs2243268 and rs2243274 of Interleukin-4 (IL-4) gene are associated with reduced risk for extrapulmonary and severe tuberculosis in Chinese Han children.

PubMed

Qi, Hui; Sun, Lin; Jin, Ya-Qiong; Shen, Chen; Chu, Ping; Wang, Sheng-Feng; Yin, Qing-Qin; Qi, Zhan; Xu, Fang; Jiao, Wei-Wei; Wu, Xi-Rong; Tian, Jian-Ling; Xiao, Jing; Shen, A-Dong

2014-04-01

Interleukin-4 (IL-4) and IL-10, which are produced by Th2 cells, serve as anti-inflammatory cytokines in the immune responses to tuberculosis (TB). In order to investigate the association between susceptibility to TB and single-nucleotide polymorphisms (SNPs) of the IL-4 and IL-10 genes, a case-control study including 346 TB patients and 374 healthy controls was performed in Chinese Han children in North China. Though no significant differences in the allelic and genotypic distributions of SNPs of these two genes were observed between control group and TB group, rs2243268-A and rs2243274-G of the IL-4 gene were associated with reduced risk of developing extrapulmonary tuberculosis (EPTB) (Prs2243268=0.005 and Prs2243274=0.004) and severe TB (Prs2243268=0.003 and Prs2243274=0.003). The haplotype comprising rs2243268-A and rs2243274-G was found to be a resistance factor against EPTB and severe TB. In addition, after stimulation with inactivated H37Rv, blood samples of the rs2243268 AA+AC carriers showed significantly reduced IL-10 production (P=0.045) compared to the CC carriers. In conclusion, rs2243268-A and rs2243274-G of the IL-4 gene were found to confer resistance to EPTB and severe TB in Chinese Han children. Copyright © 2014 Elsevier B.V. All rights reserved.

Eudragit RS PO nanoparticles for sustained release of pyridostigmine bromide

NASA Astrophysics Data System (ADS)

Hoobakht, Fatemeh; Ganji, Fariba; Vasheghani-Farahani, Ebrahim; Mousavi, Seyyed Mohammad

2013-09-01

Pyridostigmine bromide (PB) is an inhibitor of cholinesterase, which is used in the treatment of myasthenia gravis and administered for protection against exposure to toxic nerve agents. Tests were done to investigate prolonging the half-life of PB and improving its release behavior. PB was loaded in nanoparticles (NPs) of Eudragit RS PO (Eu-RS) prepared using the technique of quasi emulsion solvent diffusion. Variables of output power of the sonicator, bath temperature and mixing time, were chosen as the optimization factors to obtain the minimum sized NPs. In addition, emulsions were tested at different ratios of drug-to-polymer by dynamic light scattering to determine size and zeta potential of NPs. UV-spectroscopy was used to determine PB content of the NPs. Drug-loaded NPs were characterized by scanning electron microscopy, X-ray diffraction, and Fourier transform infrared spectra. Results determined that mixing time had a significant impact on the size of Eu-RS NPs, but power output of sonicator and bath temperature had no significant effect. The particle size obtained at the optimum condition (power output of 70 W, bath temperature of 33 °C, and mixing time of 7 min) was less than 200 nm (optimum sizes were 138.9 and 179.5 nm for Eu-RS and PB-loaded Eu-RS NPs, respectively). The optimum PB-loaded Eu-RS NPs at the PB to Eu-RS weight ratio of 1-4 and 20 % of loaded PB released from the nanocarriers within 100 h.

High pressure intensification of cassava resistant starch (RS3) yields.

PubMed

Lertwanawatana, Proyphon; Frazier, Richard A; Niranjan, Keshavan

2015-08-15

Cassava starch, typically, has resistant starch type 3 (RS3) content of 2.4%. This paper shows that the RS3 yields can be substantially enhanced by debranching cassava starch using pullulanase followed by high pressure or cyclic high-pressure annealing. RS3 yield of 41.3% was obtained when annealing was carried out at 400MPa/60°C for 15 min, whereas it took nearly 8h to obtain the same yield under conventional atmospheric annealing at 60°C. The yield of RS3 could be further significantly increased by annealing under 400 MPa/60°C pressure for 15 min followed by resting at atmospheric pressure for 3h 45 min, and repeating this cycle for up to six times. Microstructural surface analysis of the product under a scanning electron microscope showed an increasingly rigid density of the crystalline structure formed, confirming higher RS3 content. Copyright © 2015 Elsevier Ltd. All rights reserved.

40 CFR 180.545 - Prallethrin (RS)-2-methyl-4-oxo-3-(2-propynyl)cyclopent-2-enyl (1RS)-cis, trans-chrysanthemate...

Code of Federal Regulations, 2010 CFR

2010-07-01

... shall be limited to a maximum of 2.0% active ingredient. Contamination of food or food contact surfaces... EXEMPTIONS FOR PESTICIDE CHEMICAL RESIDUES IN FOOD Specific Tolerances § 180.545 Prallethrin (RS)-2-methyl-4...-methyl-4-oxo-3-(2-propynyl)cyclopent-2-enyl (1RS)-cis, trans-chrysanthemate as follows: (2) In or on food...

CagA-positive and CagA-negative Helicobacter pylori strains differentially affect the expression of micro RNAs 21, 92a, 155 and 663 in human umbilical vein endothelial cells.

PubMed

Kalani, M; Hodjati, H; GhamarTalepoor, A; Samsami Dehaghani, A; Doroudchi, M

2017-01-30

Given that the basic mechanism of the effect of Helicobacter (H.) pylori in the induction of atherosclerosis remains unknown and regarding the regulatory role of micro RNAs (miRNAs) in endothelial cell (EC) functions, we aimed to investigate the effect of H. pylori on the expression of miRNAs involved in atherosclerosis (atheromiRs) and their correlation with apoptosis in human umbilical vein EC (HUVEC). HUVECs were treated with different cytotoxin associated gene A (CagA) positive and negative H. pylori derived products, then the levels of apoptosis and miR-21, 92a, 155 and 663 were measured using flowcytometry and real time-PCR methods, respectively. Although, comparing induced apoptosis and necrosis in HUVECs revealed that water extract of CagA+ H. pylori (HpWE) was more potent than CagA- one and H. pylori lipopolysacharide (Hp-LPS), no significant difference was observed between LPS extracted from CagA+ and CagA- strains. Besides, CagA+ HpWE significantly increased the levels of anti-apoptotic miR-21, and inflammatory miRNAs 155 and 663 but not miR-92a. A positive correlation was observed between apoptosis and necrosis and miR-155 as well as the expressions of miR-21 with miR-155 (P=0.024) and miR-663 (P=0.0001). As H. pylori products differentially influenced phenotypic and epigenetic changes in ECs pictured in apoptosis and in the expression of atheromiRs, we suggest that the presence of CagA molecule accompanied by these atheromiRs may act as beneficial biomarkers predicting ECs apoptosis as a sign of plaque rupture.

RS-34 (Peacekeeper Post Boost Propulsion System) Orbital Debris Application Concept Study

NASA Technical Reports Server (NTRS)

Esther, Elizabeth A.; Burnside, Christopher G.

2013-01-01

The Advanced Concepts Office (ACO) at the NASA Marshall Space Flight Center (MSFC) lead a study to evaluate the Rocketdyne produced RS-34 propulsion system as it applies to an orbital debris removal design reference mission. The existing RS-34 propulsion system is a remaining asset from the de-commissioned United States Air Force Peacekeeper ICBM program; specifically the pressure-fed storable bi-propellant Stage IV Post Boost Propulsion System. MSFC gained experience with the RS-34 propulsion system on the successful Ares I-X flight test program flown in the Ares I-X Roll control system (RoCS). The heritage hardware proved extremely robust and reliable and sparked interest for further utilization on other potential in-space applications. Subsequently, MSFC is working closely with the USAF to obtain all the remaining RS-34 stages for re-use opportunities. Prior to pursuit of securing the hardware, MSFC commissioned the Advanced Concepts Office to understand the capability and potential applications for the RS-34 Phoenix stage as it benefits NASA, DoD, and commercial industry. Originally designed, the RS-34 Phoenix provided in-space six-degrees-of freedom operational maneuvering to deploy multiple payloads at various orbital locations. The RS-34 Concept Study, preceded by a utilization study to understand how the unique capabilities of the RS-34 Phoenix and its application to six candidate missions, sought to further understand application for an orbital debris design reference mission as the orbital debris removal mission was found to closely mimic the heritage RS-34 mission. The RS-34 Orbital Debris Application Concept Study sought to identify multiple configurations varying the degree of modification to trade for dry mass optimization and propellant load for overall capability and evaluation of several candidate missions. The results of the RS-34 Phoenix Utilization Study show that the system is technically sufficient to successfully support all of the missions

NASA Concludes Summer of RS-25 Testing

NASA Image and Video Library

2017-08-30

NASA engineers closed a summer of hot fire testing Aug. 30 for flight controllers on RS-25 engines that will help power the new Space Launch System (SLS) rocket being built to carry astronauts to deep-space destinations, including Mars. The 500-second hot fire an RS-25 engine flight controller unit on the A-1 Test Stand at Stennis Space Center near Bay St. Louis, Mississippi marked another step toward the nation’s return to human deep-space exploration missions.

NASA Conducts Final RS-25 Rocket Engine Test of 2017

NASA Image and Video Library

2017-12-13

NASA engineers at Stennis Space Center capped a year of Space Launch System testing with a final RS-25 rocket engine hot fire on Dec. 13. The 470-second test on the A-1 Test Stand was a “green run” test of an RS-25 flight controller. The engine tested also included a large 3-D-printed part, a pogo accumulator assembly, scheduled for use on future RS-25 flight engines.

22 CFR 92.92 - Service of legal process under provisions of State law.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 22 Foreign Relations 1 2010-04-01 2010-04-01 false Service of legal process under provisions of... AND RELATED SERVICES Quasi-Legal Services § 92.92 Service of legal process under provisions of State law. It may be found that a State statue purporting to regulate the service of process in foreign...

Genetic and Functional Assessment of the Role of the rs13431652-A and rs573225-A Alleles in the G6PC2 Promoter That Are Strongly Associated With Elevated Fasting Glucose Levels

PubMed Central

Bouatia-Naji, Nabila; Bonnefond, Amélie; Baerenwald, Devin A.; Marchand, Marion; Bugliani, Marco; Marchetti, Piero; Pattou, François; Printz, Richard L.; Flemming, Brian P.; Umunakwe, Obi C.; Conley, Nicholas L.; Vaxillaire, Martine; Lantieri, Olivier; Balkau, Beverley; Marre, Michel; Lévy-Marchal, Claire; Elliott, Paul; Jarvelin, Marjo-Riitta; Meyre, David; Dina, Christian; Oeser, James K.; Froguel, Philippe; O'Brien, Richard M.

2010-01-01

OBJECTIVE Genome-wide association studies have identified a single nucleotide polymorphism (SNP), rs560887, located in a G6PC2 intron that is highly correlated with variations in fasting plasma glucose (FPG). G6PC2 encodes an islet-specific glucose-6-phosphatase catalytic subunit. This study examines the contribution of two G6PC2 promoter SNPs, rs13431652 and rs573225, to the association signal. RESEARCH DESIGN AND METHODS We genotyped 9,532 normal FPG participants (FPG <6.1 mmol/l) for three G6PC2 SNPs, rs13431652 (distal promoter), rs573225 (proximal promoter), rs560887 (3rd intron). We used regression analyses adjusted for age, sex, and BMI to assess the association with FPG and haplotype analyses to assess comparative SNP contributions. Fusion gene and gel retardation analyses characterized the effect of rs13431652 and rs573225 on G6PC2 promoter activity and transcription factor binding. RESULTS Genetic analyses provide evidence for a strong contribution of the promoter SNPs to FPG variability at the G6PC2 locus (rs13431652: β = 0.075, P = 3.6 × 10−35; rs573225 β = 0.073 P = 3.6 × 10−34), in addition to rs560887 (β = 0.071, P = 1.2 × 10−31). The rs13431652-A and rs573225-A alleles promote increased NF-Y and Foxa2 binding, respectively. The rs13431652-A allele is associated with increased FPG and elevated promoter activity, consistent with the function of G6PC2 in pancreatic islets. In contrast, the rs573225-A allele is associated with elevated FPG but reduced promoter activity. CONCLUSIONS Genetic and in situ functional data support a potential role for rs13431652, but not rs573225, as a causative SNP linking G6PC2 to variations in FPG, though a causative role for rs573225 in vivo cannot be ruled out. PMID:20622168

Association Study between Coronary Artery Disease and rs1333049 and rs10757274 Polymorphisms at 9p21 Locus in South-West Iran

PubMed Central

Foroughmand, Ali Mohammad; Nikkhah, Emad; Galehdari, Hamid; Jadbabaee, Mohammad Hossin

2015-01-01

Objective Coronary artery disease (CAD) is a multi-factorial and heterogenic disease with atherosclerosis plaques formation in internal wall of coronary artery. Plaque formation results to limitation of the blood reaching to myocardium leading to appearance of some problems, such as ischemia, sudden thrombosis veins and myocardial infarction (MI). Several environmental and genetic factors are involved in prevalence and incident of CAD as follows: hypertension, high low density lipoprotein-cholesterol (LDL-C), age, diabetes mellitus, family history of early-onset heart disease and smoking. According to genome wide association studies (GWAS), five polymorphisms in the 9p21 locus seem to be associated with the CAD. We aimed to evaluate the remarkable association of two polymorphisms at 9p21 locus, rs1333049 and rs10757274, with CAD. Materials and Methods This experimental study was conducted in Golestan, Aria Hospitals and Genetics Lab of Shahid Chamran University in the city of Ahvaz, Iran, in 2010- 2011. The collected blood samples belonging to 170 CAD patients (case group) and 100 healthy individuals (control group) were analyzed by tetra-primer amplification refractory mutation system (ARMS)-polymerase chain reaction (PCR) technique. The results were analyzed using software package used for statistical analysis (SPSS; SPSS Inc., USA) version 16. A value of p<0.05 and an odd ratio (OR) with 95% confidence intervals (CI) were considered significant. Results The frequencies of CC, CG and GG genotypes for rs1333049 polymorphism in patients were 18.2, 65.3 and 16.5%, while in controls, the related values were 25, 67 and 8%, respectively. GG genotypes of rs1333049 polymorphism in CAD patients were more than control cases (OR: 0.354, 95%CI: 0.138-0.912, p=0.032). The frequencies of AA, AG and GG genotypes for rs10757274 in CAD patients were 8.2, 58.3 and 33.5%, while in controls, the related values were 35, 63 and 2%, respectively. GG Genotype in rs10757274 polymorphism

IsomiR Bank: a research resource for tracking IsomiRs.

PubMed

Zhang, Yuanwei; Zang, Qiguang; Xu, Bo; Zheng, Wei; Ban, Rongjun; Zhang, Huan; Yang, Yifan; Hao, Qiaomei; Iqbal, Furhan; Li, Ao; Shi, Qinghua

2016-07-01

: Next-Generation Sequencing (NGS) technology has revealed that microRNAs (miRNAs) are capable of exhibiting frequent differences from their corresponding mature reference sequences, generating multiple variants: the isoforms of miRNAs (isomiRs). These isomiRs mainly originate via the imprecise and alternative cleavage during the pre-miRNA processing and post-transcriptional modifications that influence miRNA stability, their sub-cellular localization and target selection. Although several tools for the identification of isomiR have been reported, no bioinformatics resource dedicated to gather isomiRs from public NGS data and to provide functional analysis of these isomiRs is available to date. Thus, a free online database, IsomiR Bank has been created to integrate isomiRs detected by our previously published algorithm CPSS. In total, 2727 samples (Small RNA NGS data downloaded from ArrayExpress) from eight species (Arabidopsis thaliana, Drosophila melanogaster, Danio rerio, Homo sapiens, Mus musculus, Oryza sativa, Solanum lycopersicum and Zea mays) are analyzed. At present, 308 919 isomiRs from 4706 mature miRNAs are collected into IsomiR Bank. In addition, IsomiR Bank provides target prediction and enrichment analysis to evaluate the effects of isomiRs on target selection. IsomiR Bank is implemented in PHP/PERL + MySQL + R format and can be freely accessed at http://mcg.ustc.edu.cn/bsc/isomir/ : aoli@ustc.edu.cn or qshi@ustc.edu.cn Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

[Polymorphisms of TLR7 rs3853839 and rs179010 are associated with susceptibility to and severity of hand, foot and mouth disease caused by enterovirus 71 in male children].

PubMed

Li, Yaping; Zhai, Song; Li, Mei; Wang, Yuan; Lu, Tong; Deng, Huiling; Zhang, Xin; Dang, Shuangsuo

2017-07-01

Objective To investigate whether the polymorphisms of TLR7/MyD88 signaling pathway is associated with the susceptibility to and severity of hand, foot and mouth disease (HFMD) caused by enterovirus 71 (EV71) in children. Methods We collected 180 EV71 HFMD cases and 201 healthy controls from both the Second Affiliated Hospital of Xi'an Jiaotong University and Xi'an Children's Hospital. The genotypes including rs3853839, rs179010 of TLR7, and rs7744 of MyD88 were detected in the 381 samples by SNPscan kit. Results The susceptibility risk (OR=2.343, 95%CI:1.516-3.621) and severity risk (OR=1.939, 95%CI: 1.064-3.521) of TLR7 rs3853839 allele C significantly increased in the male children with EV71 HFMD. Also, the susceptibility risk (OR=1.701, 95%CI: 1.142-2.535) and severity risk (OR=1.852, 95%CI: 1.038-3.305) of TLR7 rs179010 allele T significantly increased in the male children with EV71 HFMD. But there was no significant difference in the distribution of TLR7 rs179010 and rs3853839 genes between female children with EV71 HFMD and female controls. There was no correlation between the genetic polymorphisms of MyD88 rs7744 and the susceptibility to and severity of EV71 HFMD in the children. Conclusion Polymorphisms of TLR7 rs3853839 and rs179010 are correlated to the susceptibility to and severity of EV71 HFMD in male children.

Association of PNPLA3 rs738409 polymorphism with liver steatosis but not with cirrhosis in patients with HBV infection: Systematic review with meta-analysis.

PubMed

Ghalamkari, Saman; Sharafi, Heidar; Alavian, Seyed Moayed

2018-01-01

Hepatitis B virus (HBV) infection is a worldwide health issue and is well known for being the main cause of developing secondary liver complications such as cirrhosis and hepatocellular carcinoma (HCC). The PNPLA3 rs738409 polymorphism has been investigated conclusively with occurrence risk of steatosis and cirrhosis. Therefore, performing a meta-analysis of the available studies with the aim of clarifying the association between rs738409 and occurrence risk of steatosis and cirrhosis among HBV-infected patients would be helpful. Chronic HBV infection was defined as the persistence of HBsAg for more than 6 months. To gather sufficient data for this meta-analysis, reliable databases were conclusively searched using appropriate keywords. Only studies that satisfied the inclusion criteria were enrolled in the present study. This meta-analysis pooled four studies with 1135 cases of chronic hepatitis B (CHB) to evaluate the impact of PNPLA3 SNP on liver steatosis and also pooled five studies with 3713 cases of CHB to evaluate the impact of PNPLA3 SNP on cirrhosis. The association of rs738409 with each complication was investigated. The rs738409 was found to be associated with steatosis in recessive [p = 4.57 × 10 -6 , odds ratio (OR) = 2.85], dominant (p = 4.35 × 10 -6 , OR = 1.84), co-dominant (p = 6.18 × 10 -8 ; OR = 3.74) and allelic (p = 9.79 × 10 -9 ; OR = 1.78) models. No association was found between rs738409 and cirrhosis development in recessive (p = 0.99, OR = 1.00), dominant (p = 0.30, OR = 0.92), co-dominant (p = 0.74; OR = 0.96) and allelic (p = 0.45; OR = 0.96) models. Although the PNPLA3 rs738409 G allele has been associated with the risk of steatosis in CHB patients, no association between this polymorphism and the risk of cirrhosis was seen. Copyright © 2017 John Wiley & Sons, Ltd.

The Drosha rs10719 T>C polymorphism is associated with preeclampsia susceptibility.

PubMed

Rezaei, Mahnaz; Eskandari, Fatemeh; Mohammadpour-Gharehbagh, Abbas; Teimoori, Batool; Yaghmaei, Minoo; Mokhtari, Mojgan; Salimi, Saeedeh

2018-01-01

Drosha is a member of the micro RNA (miRNA) processing machinery that affects miRNA processing. Single-nucleotide polymorphisms (SNPs) in the Drosha gene might affect microRNA processing and the expression of various genes. The aim of this study is to investigate the association between SNPs in the Drosha gene and preeclampsia (PE) in the southeast of Iran. Genotyping of Drosha rs10719 and rs6877842 was performed using blood samples from 219 PE women and 205 healthy control subjects by a polymerase chain reaction-restriction fragment length polymorphism method. The Drosha rs10719TC genotype was significantly associated with 1.6-fold higher risk of PE (odds ratio (OR, 1.6 [95% CI, 1.1-2.4], P = 0.026). In addition, the frequency of the Drosha rs10719CC genotype was significantly higher in PE women and was associated with threefold higher risk of PE (OR 3 [95% CI 1.4-6.3], P = 0.004). There was no association between the Drosha rs6877842 polymorphism and PE susceptibility. The CC-GG combined genotype was associated with 3.4-fold higher risk of PE (OR 3.4 [95% CI 1.4-8.1], P = 0.007). The haplotype-based association analysis showed higher frequency of C-G haplotype of Drosha rs10719 and rs6877842 polymorphisms with the increased risk of PE 1.5-fold (OR 1.5 [95% CI 1.1 - 2], P = 0.01). The Drosha rs10719TC and CC genotypes were associated with PE risk. The CC-GG combined genotype and C-G haplotype of Drosha rs10719 and rs6877842 polymorphisms may increase PE susceptibility.

Association between MC4R rs17782313 polymorphism and overeating behaviors.

PubMed

Yilmaz, Z; Davis, C; Loxton, N J; Kaplan, A S; Levitan, R D; Carter, J C; Kennedy, J L

2015-01-01

Melanocortins have a crucial role in appetite and weight regulation. Although the melanocortin 4 receptor (MC4R) gene has been repeatedly linked to obesity and antipsychotic-induced weight gain, the mechanism behind how it leads to this effect in still undetermined. The goal of this study was to conduct an in-depth and sophisticated analysis of MC4R polymorphisms, body mass index (BMI), eating behavior and depressed mood. We genotyped 328 individuals of European ancestry on the following MC4R markers based on the relevant literature on obesity and antipsychotic-induced weight gain: rs571312, rs17782313, rs489693, rs11872992, and rs8087522. Height and weight were measured, and information on depressed mood and overeating behaviors was obtained during the in-person assessment. BMI was associated with rs17782313 C allele; however, this finding did not survive correction for multiple testing (P = 0.018). Although rs17782313 was significantly associated with depressed mood and overeating behaviors, tests of indirect effects indicated that emotional eating and food cravings, rather than depressed mood, uniquely accounted for the effect of this marker and BMI (n = 152). To our knowledge, this is the first study to investigate the link between MC4R rs17782313, mood and overeating behavior, as well as to demonstrate possible mechanisms behind MC4R's influence on body weight. If replicated in a larger sample, these results may have important clinical implications, including potential for the use of MC4R agonists in the treatment of obesity and disordered eating.

28 CFR 92.13 - Program eligibility.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 28 Judicial Administration 2 2013-07-01 2013-07-01 false Program eligibility. 92.13 Section 92.13 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.13 Program eligibility. (a) Eligible organizations for...

28 CFR 92.13 - Program eligibility.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 28 Judicial Administration 2 2011-07-01 2011-07-01 false Program eligibility. 92.13 Section 92.13 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.13 Program eligibility. (a) Eligible organizations for...

28 CFR 92.13 - Program eligibility.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 28 Judicial Administration 2 2012-07-01 2012-07-01 false Program eligibility. 92.13 Section 92.13 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.13 Program eligibility. (a) Eligible organizations for...

28 CFR 92.13 - Program eligibility.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 28 Judicial Administration 2 2014-07-01 2014-07-01 false Program eligibility. 92.13 Section 92.13 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.13 Program eligibility. (a) Eligible organizations for...

7 CFR 3015.92 - Performance reports.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 7 Agriculture 15 2011-01-01 2011-01-01 false Performance reports. 3015.92 Section 3015.92..., DEPARTMENT OF AGRICULTURE UNIFORM FEDERAL ASSISTANCE REGULATIONS Monitoring and Reporting Program Performance § 3015.92 Performance reports. (a) Nonconstruction. The awarding agency shall, if it decides that...

7 CFR 3015.92 - Performance reports.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 7 Agriculture 15 2014-01-01 2014-01-01 false Performance reports. 3015.92 Section 3015.92..., DEPARTMENT OF AGRICULTURE UNIFORM FEDERAL ASSISTANCE REGULATIONS Monitoring and Reporting Program Performance § 3015.92 Performance reports. (a) Nonconstruction. The awarding agency shall, if it decides that...

7 CFR 3015.92 - Performance reports.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 7 Agriculture 15 2013-01-01 2013-01-01 false Performance reports. 3015.92 Section 3015.92..., DEPARTMENT OF AGRICULTURE UNIFORM FEDERAL ASSISTANCE REGULATIONS Monitoring and Reporting Program Performance § 3015.92 Performance reports. (a) Nonconstruction. The awarding agency shall, if it decides that...

7 CFR 3015.92 - Performance reports.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 7 Agriculture 15 2012-01-01 2012-01-01 false Performance reports. 3015.92 Section 3015.92..., DEPARTMENT OF AGRICULTURE UNIFORM FEDERAL ASSISTANCE REGULATIONS Monitoring and Reporting Program Performance § 3015.92 Performance reports. (a) Nonconstruction. The awarding agency shall, if it decides that...

FTO gene polymorphisms (rs9939609 and rs17817449) as predictors of Type 2 Diabetes Mellitus in obese Iraqi population.

PubMed

Younus, Laith A; Algenabi, Abdul Hussein A; Abdul-Zhara, Mohammed S; Hussein, Majid K

2017-09-05

The variation of the SNPs in FTO (fat mass and obesity associated) gene are improved to be associated with obesity and type 2 diabetes (T2DM) in some ethnic groups for example in European while, this consistency is controversial in Asians and there were few studies in Iraqi population about the effect of this gene on the development of T2DM in obese patients. Therefore, the objective of this study is to investigate the impact of the two common FTO gene variants in the development of T2DM in obese Iraqi patients. A case-control study in which the FTO gene variants rs9939609 and rs17817449 were genotyping in a total of 800 individuals, 400 T2DM obese patients (patients group) and 400 healthy control obese volunteers (control group) to explore the relation of these SNPs with T2DM in obese Iraqi population. The patients group was enrolled from diabetic clinic in Al Najaf al Ashraf based on WHO guidelines of T2DM. From whole blood the DNA was extraction and genotyped by using ScaI and AlwNI enzymes respectively in the PCR-RFLP technique. Multinomial logistic regression was applied to compare the proportions of genotypes and alleles. The odd's ratio, t-test P value at 95% confidence interval were measured before and after adjustment of BMI, age and sex adjustment. The genetic power, Hardy Weinberg equilibrium and haplotype analysis were tested in the present study. It was observed that the presence of T allele in the two SNPs rs9939609 and rs17817449 in the FTO gene polymorphisms was associated with increased risk for the development of T2DM in Iraqi obese individuals. The minor allele (T) in rs9939609 was significantly higher (P=0.0001) in T2DM (31.25%) when compared with that of the control obese group (20%). The Homozygous genotype (TT) significantly (OR=3.25, CI 95% 1.87-5.64, P=0.000) increased the risk of T2DM by three folds with respect to those of wild type (AA) after adjustment for age, sex and BMI, furthermore, it was significantly increased the risk in the

24 CFR 92.358 - Consultant activities.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 24 Housing and Urban Development 1 2014-04-01 2014-04-01 false Consultant activities. 92.358 Section 92.358 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Other Federal Requirements § 92.358 Consultant activities. No...

24 CFR 92.358 - Consultant activities.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 24 Housing and Urban Development 1 2011-04-01 2011-04-01 false Consultant activities. 92.358 Section 92.358 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Other Federal Requirements § 92.358 Consultant activities. No...

24 CFR 92.358 - Consultant activities.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Consultant activities. 92.358 Section 92.358 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Other Federal Requirements § 92.358 Consultant activities. No...

24 CFR 92.358 - Consultant activities.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 24 Housing and Urban Development 1 2013-04-01 2013-04-01 false Consultant activities. 92.358 Section 92.358 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Other Federal Requirements § 92.358 Consultant activities. No...

24 CFR 92.358 - Consultant activities.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 24 Housing and Urban Development 1 2012-04-01 2012-04-01 false Consultant activities. 92.358 Section 92.358 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Other Federal Requirements § 92.358 Consultant activities. No...

24 CFR 92.610 - Program requirements.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Program requirements. 92.610 Section 92.610 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.610 Program...

24 CFR 92.608 - Consolidated plan.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Consolidated plan. 92.608 Section 92.608 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.608 Consolidated...

24 CFR 92.602 - Eligible activities.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Eligible activities. 92.602 Section 92.602 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.602 Eligible...

24 CFR 92.616 - Program administration.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Program administration. 92.616 Section 92.616 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.616 Program...

24 CFR 92.612 - Project requirements.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Project requirements. 92.612 Section 92.612 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.612 Project...

46 CFR 92.07-10 - Construction.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 4 2010-10-01 2010-10-01 false Construction. 92.07-10 Section 92.07-10 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) CARGO AND MISCELLANEOUS VESSELS CONSTRUCTION AND ARRANGEMENT Structural Fire Protection § 92.07-10 Construction. (a) The hull, superstructure, structural...

24 CFR 92.610 - Program requirements.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 24 Housing and Urban Development 1 2011-04-01 2011-04-01 false Program requirements. 92.610 Section 92.610 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.610 Program...

24 CFR 92.608 - Consolidated plan.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 24 Housing and Urban Development 1 2011-04-01 2011-04-01 false Consolidated plan. 92.608 Section 92.608 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.608 Consolidated...

24 CFR 92.612 - Project requirements.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 24 Housing and Urban Development 1 2012-04-01 2012-04-01 false Project requirements. 92.612 Section 92.612 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.612 Project...

24 CFR 92.608 - Consolidated plan.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 24 Housing and Urban Development 1 2013-04-01 2013-04-01 false Consolidated plan. 92.608 Section 92.608 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.608 Consolidated...

24 CFR 92.602 - Eligible activities.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 24 Housing and Urban Development 1 2013-04-01 2013-04-01 false Eligible activities. 92.602 Section 92.602 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.602 Eligible...

24 CFR 92.616 - Program administration.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 24 Housing and Urban Development 1 2012-04-01 2012-04-01 false Program administration. 92.616 Section 92.616 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.616 Program...

24 CFR 92.608 - Consolidated plan.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 24 Housing and Urban Development 1 2014-04-01 2014-04-01 false Consolidated plan. 92.608 Section 92.608 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.608 Consolidated...

24 CFR 92.612 - Project requirements.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 24 Housing and Urban Development 1 2011-04-01 2011-04-01 false Project requirements. 92.612 Section 92.612 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.612 Project...

24 CFR 92.610 - Program requirements.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 24 Housing and Urban Development 1 2013-04-01 2013-04-01 false Program requirements. 92.610 Section 92.610 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.610 Program...

24 CFR 92.602 - Eligible activities.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 24 Housing and Urban Development 1 2012-04-01 2012-04-01 false Eligible activities. 92.602 Section 92.602 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.602 Eligible...

24 CFR 92.610 - Program requirements.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 24 Housing and Urban Development 1 2012-04-01 2012-04-01 false Program requirements. 92.610 Section 92.610 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.610 Program...

24 CFR 92.616 - Program administration.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 24 Housing and Urban Development 1 2013-04-01 2013-04-01 false Program administration. 92.616 Section 92.616 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.616 Program...

24 CFR 92.608 - Consolidated plan.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 24 Housing and Urban Development 1 2012-04-01 2012-04-01 false Consolidated plan. 92.608 Section 92.608 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.608 Consolidated...

24 CFR 92.612 - Project requirements.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 24 Housing and Urban Development 1 2013-04-01 2013-04-01 false Project requirements. 92.612 Section 92.612 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.612 Project...

24 CFR 92.612 - Project requirements.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 24 Housing and Urban Development 1 2014-04-01 2014-04-01 false Project requirements. 92.612 Section 92.612 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.612 Project...

24 CFR 92.610 - Program requirements.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 24 Housing and Urban Development 1 2014-04-01 2014-04-01 false Program requirements. 92.610 Section 92.610 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.610 Program...

24 CFR 92.616 - Program administration.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 24 Housing and Urban Development 1 2014-04-01 2014-04-01 false Program administration. 92.616 Section 92.616 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.616 Program...

24 CFR 92.616 - Program administration.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 24 Housing and Urban Development 1 2011-04-01 2011-04-01 false Program administration. 92.616 Section 92.616 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.616 Program...

24 CFR 92.602 - Eligible activities.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 24 Housing and Urban Development 1 2011-04-01 2011-04-01 false Eligible activities. 92.602 Section 92.602 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.602 Eligible...

24 CFR 92.602 - Eligible activities.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 24 Housing and Urban Development 1 2014-04-01 2014-04-01 false Eligible activities. 92.602 Section 92.602 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM American Dream Downpayment Initiative § 92.602 Eligible...

22 CFR 92.36 - Authentication defined.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 22 Foreign Relations 1 2010-04-01 2010-04-01 false Authentication defined. 92.36 Section 92.36... Notarial Acts § 92.36 Authentication defined. An authentication is a certification of the genuineness of... recognized in another jurisdiction. Documents which may require authentication include legal instruments...

7 CFR 3201.92 - Fuel conditioners.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 7 Agriculture 15 2013-01-01 2013-01-01 false Fuel conditioners. 3201.92 Section 3201.92... Designated Items § 3201.92 Fuel conditioners. (a) Definition. Products formulated to improve the performance... fuel system. (b) Minimum biobased content. The Federal preferred procurement product must have a...

7 CFR 3201.92 - Fuel conditioners.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 7 Agriculture 15 2014-01-01 2014-01-01 false Fuel conditioners. 3201.92 Section 3201.92... Designated Items § 3201.92 Fuel conditioners. (a) Definition. Products formulated to improve the performance... fuel system. (b) Minimum biobased content. The Federal preferred procurement product must have a...

7 CFR 1735.92 - Accounting considerations.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 11 2010-01-01 2010-01-01 false Accounting considerations. 1735.92 Section 1735.92... All Acquisitions and Mergers § 1735.92 Accounting considerations. (a) Proper accounting shall be... in the absence of such a commission, as required by RUS based on Generally Accepted Accounting...

22 CFR 92.1 - Definitions.

Code of Federal Regulations, 2010 CFR

2010-04-01

... document. (d) For purposes of this part, except §§ 92.36 through 92.42 relating to the authentication of... perform notarial services shall not include the authority to perform authentications, to notarize patent...

Amyloid arthropathy revealed by RS3PE syndrome.

PubMed

Magy, N; Michel, F; Auge, B; Toussirot, E; Wendling, D

2000-01-01

Amyloid arthropathy is a form of primary AL amyloidosis with a monoclonal component in the blood and/or urine, and RS3PE syndrome is acute edematous polysynovitis in subjects older than 60 years. A 74-year-old man was diagnosed with both disorders. He was admitted for benign acute polyarthritis of the hands and feet and reported carpal tunnel symptoms predominating on the right. A synovial biopsy at the right wrist disclosed deposits that stained with Congo red even after potassium permanganate treatment (positive Wright's test). Articular AL amyloidosis was diagnosed. The symptoms resolved under glucocorticoid therapy alone, casting some doubt on their relationship with the amyloidosis. Roentgenograms showed geodes, a feature not present in RS3PE. Whether RS3PE may be among the possible presentations of articular amyloidosis is discussed.

Validation of Omron RS8, RS6, and RS3 home blood pressure monitoring devices, in accordance with the European Society of Hypertension International Protocol revision 2010.

PubMed

Takahashi, Hakuo; Yoshika, Masamichi; Yokoi, Toyohiko

2013-01-01

Allowing patients to measure their blood pressure at home is recognized as being of clinical value. However, it is not known how often these measurements are taken correctly. Blood pressure monitors for home use fall into two types based on the position of the cuff, ie, at the upper arm or the wrist. The latter is particularly convenient, as measurements can be taken fully clothed. This study aimed to evaluate the performance of the wrist-type blood pressure monitors Omron RS8 (HEM-6310F-E), Omron RS6 (HEM-6221-E), and Omron RS3 (HEM-6130-E). A team of three trained doctors validated the performance of these devices by comparing the measurements obtained from these devices with those taken using a standard mercury sphygmomanometer. All the devices met the validation requirements of the European Society of Hypertension International Protocol revision 2010. The difference in blood pressure readings between the tested device and the standard mercury sphygmomanometer was within 3 mmHg, which is acceptable according to the European Society of Hypertension guidelines. All the home devices tested were found to be suitable for measuring blood pressure at home because their performance fulfilled the requirement of the guidelines.

22 CFR 92.64 - Filing depositions.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 22 Foreign Relations 1 2010-04-01 2010-04-01 false Filing depositions. 92.64 Section 92.64 Foreign Relations DEPARTMENT OF STATE LEGAL AND RELATED SERVICES NOTARIAL AND RELATED SERVICES Depositions and Letters Rogatory § 92.64 Filing depositions. (a) Preparation and transmission of envelope. The notice or...

22 CFR 92.64 - Filing depositions.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 22 Foreign Relations 1 2011-04-01 2011-04-01 false Filing depositions. 92.64 Section 92.64 Foreign Relations DEPARTMENT OF STATE LEGAL AND RELATED SERVICES NOTARIAL AND RELATED SERVICES Depositions and Letters Rogatory § 92.64 Filing depositions. (a) Preparation and transmission of envelope. The notice or...

22 CFR 92.37 - Authentication procedure.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 22 Foreign Relations 1 2010-04-01 2010-04-01 false Authentication procedure. 92.37 Section 92.37... Notarial Acts § 92.37 Authentication procedure. (a) The consular officer must compare the foreign official...) Where the State law requires the consular officer's certificate of authentication to show that the...

7 CFR 1737.92 - Loan documents.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 11 2010-01-01 2010-01-01 false Loan documents. 1737.92 Section 1737.92 Agriculture... PRE-LOAN POLICIES AND PROCEDURES COMMON TO INSURED AND GUARANTEED TELECOMMUNICATIONS LOANS Final Loan Approval Procedures § 1737.92 Loan documents. Following approval of the loan, RUS shall forward the...

50 CFR 27.92 - Private structures.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 6 2010-10-01 2010-10-01 false Private structures. 27.92 Section 27.92... NATIONAL WILDLIFE REFUGE SYSTEM PROHIBITED ACTS Other Disturbing Violations § 27.92 Private structures. No..., pier, dock, fence, wall, pile, anchorage, or other structure or obstruction in any national wildlife...

22 CFR 92.3 - Consular districts.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 22 Foreign Relations 1 2012-04-01 2012-04-01 false Consular districts. 92.3 Section 92.3 Foreign Relations DEPARTMENT OF STATE LEGAL AND RELATED SERVICES NOTARIAL AND RELATED SERVICES Introduction § 92.3 Consular districts. Where consular districts have been established, the geographic limits of the district...

46 CFR 92.20-15 - Construction.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 46 Shipping 4 2013-10-01 2013-10-01 false Construction. 92.20-15 Section 92.20-15 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) CARGO AND MISCELLANEOUS VESSELS CONSTRUCTION AND ARRANGEMENT Accommodations for Officers and Crew § 92.20-15 Construction. All crew spaces are to be...

46 CFR 92.20-15 - Construction.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 4 2010-10-01 2010-10-01 false Construction. 92.20-15 Section 92.20-15 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) CARGO AND MISCELLANEOUS VESSELS CONSTRUCTION AND ARRANGEMENT Accommodations for Officers and Crew § 92.20-15 Construction. All crew spaces are to be...

46 CFR 92.20-15 - Construction.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 46 Shipping 4 2011-10-01 2011-10-01 false Construction. 92.20-15 Section 92.20-15 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) CARGO AND MISCELLANEOUS VESSELS CONSTRUCTION AND ARRANGEMENT Accommodations for Officers and Crew § 92.20-15 Construction. All crew spaces are to be...

46 CFR 92.20-15 - Construction.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 46 Shipping 4 2012-10-01 2012-10-01 false Construction. 92.20-15 Section 92.20-15 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) CARGO AND MISCELLANEOUS VESSELS CONSTRUCTION AND ARRANGEMENT Accommodations for Officers and Crew § 92.20-15 Construction. All crew spaces are to be...

46 CFR 92.20-15 - Construction.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 46 Shipping 4 2014-10-01 2014-10-01 false Construction. 92.20-15 Section 92.20-15 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) CARGO AND MISCELLANEOUS VESSELS CONSTRUCTION AND ARRANGEMENT Accommodations for Officers and Crew § 92.20-15 Construction. All crew spaces are to be...

29 CFR 1917.92 - Respiratory protection.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 29 Labor 7 2012-07-01 2012-07-01 false Respiratory protection. 1917.92 Section 1917.92 Labor Regulations Relating to Labor (Continued) OCCUPATIONAL SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR (CONTINUED) MARINE TERMINALS Personal Protection § 1917.92 Respiratory protection. (See § 1917.1(a)(2)(x...

29 CFR 1917.92 - Respiratory protection.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 29 Labor 7 2014-07-01 2014-07-01 false Respiratory protection. 1917.92 Section 1917.92 Labor Regulations Relating to Labor (Continued) OCCUPATIONAL SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR (CONTINUED) MARINE TERMINALS Personal Protection § 1917.92 Respiratory protection. (See § 1917.1(a)(2)(x...

29 CFR 1917.92 - Respiratory protection.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 29 Labor 7 2011-07-01 2011-07-01 false Respiratory protection. 1917.92 Section 1917.92 Labor Regulations Relating to Labor (Continued) OCCUPATIONAL SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR (CONTINUED) MARINE TERMINALS Personal Protection § 1917.92 Respiratory protection. (See § 1917.1(a)(2)(x...

29 CFR 1917.92 - Respiratory protection.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 29 Labor 7 2010-07-01 2010-07-01 false Respiratory protection. 1917.92 Section 1917.92 Labor Regulations Relating to Labor (Continued) OCCUPATIONAL SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR (CONTINUED) MARINE TERMINALS Personal Protection § 1917.92 Respiratory protection. (See § 1917.1(a)(2)(x...

29 CFR 1917.92 - Respiratory protection.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 29 Labor 7 2013-07-01 2013-07-01 false Respiratory protection. 1917.92 Section 1917.92 Labor Regulations Relating to Labor (Continued) OCCUPATIONAL SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR (CONTINUED) MARINE TERMINALS Personal Protection § 1917.92 Respiratory protection. (See § 1917.1(a)(2)(x...

24 CFR 92.65 - Funding sanctions.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 24 Housing and Urban Development 1 2011-04-01 2011-04-01 false Funding sanctions. 92.65 Section 92.65 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Allocation Formula Insular Areas Program § 92.65 Funding sanctions...

24 CFR 92.65 - Funding sanctions.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 24 Housing and Urban Development 1 2012-04-01 2012-04-01 false Funding sanctions. 92.65 Section 92.65 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Allocation Formula Insular Areas Program § 92.65 Funding sanctions...

24 CFR 92.65 - Funding sanctions.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 24 Housing and Urban Development 1 2014-04-01 2014-04-01 false Funding sanctions. 92.65 Section 92.65 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Allocation Formula Insular Areas Program § 92.65 Funding sanctions...

24 CFR 92.65 - Funding sanctions.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 24 Housing and Urban Development 1 2013-04-01 2013-04-01 false Funding sanctions. 92.65 Section 92.65 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Allocation Formula Insular Areas Program § 92.65 Funding sanctions...

24 CFR 92.65 - Funding sanctions.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Funding sanctions. 92.65 Section 92.65 Housing and Urban Development Office of the Secretary, Department of Housing and Urban Development HOME INVESTMENT PARTNERSHIPS PROGRAM Allocation Formula Insular Areas Program § 92.65 Funding sanctions...

7 CFR 301.92-10 - Treatments.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 5 2010-01-01 2010-01-01 false Treatments. 301.92-10 Section 301.92-10 Agriculture..., DEPARTMENT OF AGRICULTURE DOMESTIC QUARANTINE NOTICES Phytophthora Ramorum § 301.92-10 Treatments. Treatment... the spread of Phytophthora ramorum. The following treatments also may be used for the regulated...

24 CFR 92.50 - Formula allocation.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 24 Housing and Urban Development 1 2010-04-01 2010-04-01 false Formula allocation. 92.50 Section 92.50 Housing and Urban Development Office of the Secretary, Department of Housing and Urban... previous fiscal year, are metropolitan cities, urban counties, or consortia approved under § 92.101; and...

ACE insertion/deletion polymorphism (rs1799752) modifies the renoprotective effect of renin-angiotensin system blockade in patients with IgA nephropathy.

PubMed

Teranishi, Junya; Yamamoto, Ryohei; Nagasawa, Yasuyuki; Shoji, Tatsuya; Iwatani, Hirotsugu; Okada, Noriyuki; Moriyama, Toshiki; Yamauchi, Atsushi; Tsubakihara, Yoshiharu; Imai, Enyu; Rakugi, Hiromi; Isaka, Yoshitaka

2015-09-01

Little is known about genetic predictors that modify the renoprotective effect of renin-angiotensin system (RAS) blockade in IgA nephropathy (IgAN). The present multicenter retrospective observational study examined effect modification between RAS blockade and three RAS-related gene polymorphisms in 237 IgAN patients, including ACE I/D (rs1799752), AT1R A1166C (rs5186) and AGT T704C (rs699). During 9.9 ± 4.2 years of observation, 63 patients progressed to a 50% increase in serum creatinine level. Only ACE I/D predicted the outcome (ACE DD vs ID/II, hazard ratio 1.86 (95% confidence interval 1.03, 3.33)) and modified the renoprotective effect of RAS blockade (p for interaction between ACE DD and RAS blockade = 0.087). RAS blockade suppressed progression in ACE DD patients but not in ID/II patients (ACE ID/II with RAS blockade as a reference; ID/II without RAS blockade 1.45 (0.72, 2.92); DD without RAS blockade 3.06 (1.39, 6.73); DD with RAS blockade 1.51 (0.54, 4.19)), which was ascertained in a model with the outcome of slope of estimated glomerular filtration rate (p = 0.045 for interaction). ACE I/D predicted the IgAN progression and the renoprotective effect of RAS blockade in IgAN patients whereas neither AT1R A1166C nor AGT T704C did. © The Author(s) 2014.

45 CFR 92.41 - Financial reporting.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 45 Public Welfare 1 2010-10-01 2010-10-01 false Financial reporting. 92.41 Section 92.41 Public... Reports, Records Retention, and Enforcement § 92.41 Financial reporting. (a) General. (1) Except as... authorized by OMB, for: (i) Submitting financial reports to Federal agencies, or (ii) Requesting advances or...

11 CFR 100.92 - Candidate debates.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 11 Federal Elections 1 2011-01-01 2011-01-01 false Candidate debates. 100.92 Section 100.92 Federal Elections FEDERAL ELECTION COMMISSION GENERAL SCOPE AND DEFINITIONS (2 U.S.C. 431) Exceptions to Contributions § 100.92 Candidate debates. Funds provided to defray costs incurred in staging candidate debates...

11 CFR 100.92 - Candidate debates.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 11 Federal Elections 1 2010-01-01 2010-01-01 false Candidate debates. 100.92 Section 100.92 Federal Elections FEDERAL ELECTION COMMISSION GENERAL SCOPE AND DEFINITIONS (2 U.S.C. 431) Exceptions to Contributions § 100.92 Candidate debates. Funds provided to defray costs incurred in staging candidate debates...

21 CFR 601.92 - Withdrawal procedures.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 21 Food and Drugs 7 2014-04-01 2014-04-01 false Withdrawal procedures. 601.92 Section 601.92 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) BIOLOGICS LICENSING Approval of Biological Products When Human Efficacy Studies Are Not Ethical or Feasible § 601.92...

21 CFR 601.92 - Withdrawal procedures.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 21 Food and Drugs 7 2013-04-01 2013-04-01 false Withdrawal procedures. 601.92 Section 601.92 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) BIOLOGICS LICENSING Approval of Biological Products When Human Efficacy Studies Are Not Ethical or Feasible § 601.92...

21 CFR 601.92 - Withdrawal procedures.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 21 Food and Drugs 7 2012-04-01 2012-04-01 false Withdrawal procedures. 601.92 Section 601.92 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) BIOLOGICS LICENSING Approval of Biological Products When Human Efficacy Studies Are Not Ethical or Feasible § 601.92...

40 CFR 92.506 - Test procedures.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 40 Protection of Environment 20 2014-07-01 2013-07-01 true Test procedures. 92.506 Section 92.506... and Audit Programs § 92.506 Test procedures. (a)(1) For locomotives and locomotive engines subject to the provisions of this subpart, the prescribed test procedures are those procedures described in...

27 CFR 6.92 - Newspaper cuts.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false Newspaper cuts. 6.92 Section 6.92 Alcohol, Tobacco Products and Firearms ALCOHOL AND TOBACCO TAX AND TRADE BUREAU, DEPARTMENT OF THE TREASURY LIQUORS âTIED-HOUSEâ Exceptions § 6.92 Newspaper cuts. Newspaper cuts, mats, or...

30 CFR 7.92 - New technology.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 30 Mineral Resources 1 2010-07-01 2010-07-01 false New technology. 7.92 Section 7.92 Mineral Resources MINE SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR TESTING, EVALUATION, AND APPROVAL OF... Mines § 7.92 New technology. MSHA may approve a diesel engine that incorporates technology for which the...

45 CFR 92.41 - Financial reporting.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 45 Public Welfare 1 2011-10-01 2011-10-01 false Financial reporting. 92.41 Section 92.41 Public... Reports, Records Retention, and Enforcement § 92.41 Financial reporting. (a) General. (1) Except as... authorized by OMB, for: (i) Submitting financial reports to Federal agencies, or (ii) Requesting advances or...

30 CFR 7.92 - New technology.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 30 Mineral Resources 1 2012-07-01 2012-07-01 false New technology. 7.92 Section 7.92 Mineral Resources MINE SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR TESTING, EVALUATION, AND APPROVAL OF... Mines § 7.92 New technology. MSHA may approve a diesel engine that incorporates technology for which the...

30 CFR 7.92 - New technology.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 30 Mineral Resources 1 2011-07-01 2011-07-01 false New technology. 7.92 Section 7.92 Mineral Resources MINE SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR TESTING, EVALUATION, AND APPROVAL OF... Mines § 7.92 New technology. MSHA may approve a diesel engine that incorporates technology for which the...

30 CFR 7.92 - New technology.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 30 Mineral Resources 1 2013-07-01 2013-07-01 false New technology. 7.92 Section 7.92 Mineral Resources MINE SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR TESTING, EVALUATION, AND APPROVAL OF... Mines § 7.92 New technology. MSHA may approve a diesel engine that incorporates technology for which the...

30 CFR 7.92 - New technology.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 30 Mineral Resources 1 2014-07-01 2014-07-01 false New technology. 7.92 Section 7.92 Mineral Resources MINE SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR TESTING, EVALUATION, AND APPROVAL OF... Mines § 7.92 New technology. MSHA may approve a diesel engine that incorporates technology for which the...

24 CFR 92.66 - Reallocation.

Code of Federal Regulations, 2014 CFR

2014-04-01

... INVESTMENT PARTNERSHIPS PROGRAM Allocation Formula Insular Areas Program § 92.66 Reallocation. Any HOME funds... allocation amount for one or more of the remaining insular areas as provided in § 92.60 of this part, will be...

24 CFR 92.66 - Reallocation.

Code of Federal Regulations, 2010 CFR

2010-04-01

... INVESTMENT PARTNERSHIPS PROGRAM Allocation Formula Insular Areas Program § 92.66 Reallocation. Any HOME funds... allocation amount for one or more of the remaining insular areas as provided in § 92.60 of this part, will be...

24 CFR 92.66 - Reallocation.

Code of Federal Regulations, 2013 CFR

2013-04-01

... INVESTMENT PARTNERSHIPS PROGRAM Allocation Formula Insular Areas Program § 92.66 Reallocation. Any HOME funds... allocation amount for one or more of the remaining insular areas as provided in § 92.60 of this part, will be...

24 CFR 92.66 - Reallocation.

Code of Federal Regulations, 2012 CFR

2012-04-01

... INVESTMENT PARTNERSHIPS PROGRAM Allocation Formula Insular Areas Program § 92.66 Reallocation. Any HOME funds... allocation amount for one or more of the remaining insular areas as provided in § 92.60 of this part, will be...

24 CFR 92.66 - Reallocation.

Code of Federal Regulations, 2011 CFR

2011-04-01

... INVESTMENT PARTNERSHIPS PROGRAM Allocation Formula Insular Areas Program § 92.66 Reallocation. Any HOME funds... allocation amount for one or more of the remaining insular areas as provided in § 92.60 of this part, will be...

Association between MC4R rs17782313 Polymorphism and Overeating Behaviours

PubMed Central

Yilmaz, Zeynep; Davis, Caroline; Loxton, Natalie J.; Kaplan, Allan S.; Levitan, Robert D.; Carter, Jacqueline C.; Kennedy, James L.

2014-01-01

Background/Objectives Melanocortins play a crucial role in appetite and weight regulation. Although the melanocortin 4 receptor (MC4R) gene has been repeatedly linked to obesity and antipsychotic-induced weight gain, the mechanism behind how it leads to this effect in still undetermined. The goal of this study was to conduct an in-depth and sophisticated analysis of MC4R polymorphisms, body mass index (BMI), eating behaviour, and depressed mood. Subjects/Methods We genotyped 328 individuals of European ancestry on the following MC4R markers based on the relevant literature on obesity and antipsychotic-induced weight gain: rs571312, rs17782313, rs489693, rs11872992, and rs8087522. Height and weight were measured, and information on depressed mood and overeating behaviours was obtained during the in-person assessment. Results BMI was associated with rs17782313 C allele; however this finding did not survive correction for multiple testing (p=0.018). Although rs17782313 was significantly associated with depressed mood and overeating behaviours, tests of indirect effects indicated that emotional eating and food cravings, rather than depressed mood, uniquely accounted for the effect of this marker and BMI (n=152). Conclusions To our knowledge, this is the first study to investigate the link between MC4R rs17782313, mood and overeating behaviour, as well as to demonstrate possible mechanisms behind MC4R’s influence on body weight. If replicated in a larger sample, these results may have important clinical implications, including potential for the use of MC4R agonists in the treatment of obesity and disordered eating. PMID:24827639

12 CFR 545.92 - Branch offices.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 12 Banks and Banking 5 2010-01-01 2010-01-01 false Branch offices. 545.92 Section 545.92 Banks and Banking OFFICE OF THRIFT SUPERVISION, DEPARTMENT OF THE TREASURY FEDERAL SAVINGS ASSOCIATIONS-OPERATIONS § 545.92 Branch offices. (a) Definition. A branch office of a Federal savings association (“you”) is any...

Genetic association of polymorphism rs1333049 with gout.

PubMed

Wang, Binbin; Meng, Dongmei; Wang, Jing; Liu, Shiguo; Zhou, Sirui; Miao, Zhimin; Han, Lin; Chu, Nan; Zhang, Kun; Ma, Xu; Li, Changgui

2011-09-01

We suspect that genes or loci that contribute to coronary artery disease (CAD) may also play a role in the pathogenesis of gout, since hyperuricaemia leads to gout, and serum uric acid (SUA) levels are potential risk factors for CAD. The single nucleotide polymorphism (SNP) rs1333049 (C/G) on chromosome 9p21 has been implicated in previous studies to be associated with CAD. The aim of this study was to evaluate the relationship between this SNP and gout pathogenesis. Nine hundred Chinese Han were recruited for this study (461 gout patients and 439 gout-free individuals). The rs1333049 SNP and surrounding sequences were PCR sequenced. There was a clear link between the rs1333049 genotypic and allelic frequencies between gout cases and controls (χ(2) = 6.81, df = 2, P = 0.033 by genotype; χ(2) = 6.63, df = 1, P = 0.01 by allele). There was a significantly increased risk of gout in carriers of the CC genotype (odds ratio = 1.43, 95% CI 1.07, 1.91). To the best of our knowledge, our findings are the first to establish an association of rs1333049 with gout in a Chinese Han population. Meanwhile, this SNP is homologous to miR-519 and miR-520.

45 CFR 92.31 - Real property.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 45 Public Welfare 1 2013-10-01 2013-10-01 false Real property. 92.31 Section 92.31 Public Welfare..., Property, and Subawards § 92.31 Real property. (a) Title. Subject to the obligations and conditions set forth in this section, title to real property acquired under a grant or subgrant will vest upon...

45 CFR 92.31 - Real property.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 45 Public Welfare 1 2014-10-01 2014-10-01 false Real property. 92.31 Section 92.31 Public Welfare..., Property, and Subawards § 92.31 Real property. (a) Title. Subject to the obligations and conditions set forth in this section, title to real property acquired under a grant or subgrant will vest upon...

45 CFR 92.31 - Real property.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 45 Public Welfare 1 2011-10-01 2011-10-01 false Real property. 92.31 Section 92.31 Public Welfare..., Property, and Subawards § 92.31 Real property. (a) Title. Subject to the obligations and conditions set forth in this section, title to real property acquired under a grant or subgrant will vest upon...

45 CFR 92.31 - Real property.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 45 Public Welfare 1 2012-10-01 2012-10-01 false Real property. 92.31 Section 92.31 Public Welfare..., Property, and Subawards § 92.31 Real property. (a) Title. Subject to the obligations and conditions set forth in this section, title to real property acquired under a grant or subgrant will vest upon...

40 CFR 92.5 - Reference materials.

Code of Federal Regulations, 2011 CFR

2011-07-01

... § 92.113 ASTM D 1945-91, Standard Test Method for Analysis of Natural Gas by Gas Chromatography § 92... Supercritical Fluid Chromatography § 92.113 ASTM E 29-93a, Standard Practice for Using Significant Digits in....119 SAE Recommended Practice J244, Measurement of Intake Air or Exhaust Gas Flow of Diesel Engines...

31 CFR 92.18 - Judicial review.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 31 Money and Finance: Treasury 1 2010-07-01 2010-07-01 false Judicial review. 92.18 Section 92.18... States Mint § 92.18 Judicial review. A Final Notice of Assessment issued under the procedures in this subpart may be subject to judicial review pursuant to 5 U.S.C. 701 et seq. ...

45 CFR 92.25 - Program income.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 45 Public Welfare 1 2010-10-01 2010-10-01 false Program income. 92.25 Section 92.25 Public Welfare... Administration § 92.25 Program income. (a) General. Grantees are encouraged to earn income to defray program costs. Program income includes income from fees for services performed, from the use or rental of real...

46 CFR 92.10-10 - Location.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 4 2010-10-01 2010-10-01 false Location. 92.10-10 Section 92.10-10 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) CARGO AND MISCELLANEOUS VESSELS CONSTRUCTION AND ARRANGEMENT Means of Escape § 92.10-10 Location. (a) The two means of escape shall be as remote as practicable so as...

40 CFR 92.126 - Test run.

Code of Federal Regulations, 2011 CFR

2011-07-01

...). (5) Read and record all required general and pre-test data (i.e., all required data other than data... 40 Protection of Environment 20 2011-07-01 2011-07-01 false Test run. 92.126 Section 92.126... POLLUTION FROM LOCOMOTIVES AND LOCOMOTIVE ENGINES Test Procedures § 92.126 Test run. (a) The following steps...

40 CFR 92.126 - Test run.

Code of Federal Regulations, 2012 CFR

2012-07-01

...). (5) Read and record all required general and pre-test data (i.e., all required data other than data... 40 Protection of Environment 21 2012-07-01 2012-07-01 false Test run. 92.126 Section 92.126... POLLUTION FROM LOCOMOTIVES AND LOCOMOTIVE ENGINES Test Procedures § 92.126 Test run. (a) The following steps...

40 CFR 92.126 - Test run.

Code of Federal Regulations, 2014 CFR

2014-07-01

...). (5) Read and record all required general and pre-test data (i.e., all required data other than data... 40 Protection of Environment 20 2014-07-01 2013-07-01 true Test run. 92.126 Section 92.126... POLLUTION FROM LOCOMOTIVES AND LOCOMOTIVE ENGINES Test Procedures § 92.126 Test run. (a) The following steps...

40 CFR 92.126 - Test run.

Code of Federal Regulations, 2013 CFR

2013-07-01

...). (5) Read and record all required general and pre-test data (i.e., all required data other than data... 40 Protection of Environment 21 2013-07-01 2013-07-01 false Test run. 92.126 Section 92.126... POLLUTION FROM LOCOMOTIVES AND LOCOMOTIVE ENGINES Test Procedures § 92.126 Test run. (a) The following steps...

40 CFR 92.126 - Test run.

Code of Federal Regulations, 2010 CFR

2010-07-01

...). (5) Read and record all required general and pre-test data (i.e., all required data other than data... 40 Protection of Environment 20 2010-07-01 2010-07-01 false Test run. 92.126 Section 92.126... POLLUTION FROM LOCOMOTIVES AND LOCOMOTIVE ENGINES Test Procedures § 92.126 Test run. (a) The following steps...

40 CFR 92.405 - Alternative report formats.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 40 Protection of Environment 21 2013-07-01 2013-07-01 false Alternative report formats. 92.405... Reporting Requirements, Voluntary Emission Recall Program § 92.405 Alternative report formats. (a) Any manufacturer or remanufacturer may submit a plan for making either of the reports required by §§ 92.403 and 92...

40 CFR 92.405 - Alternative report formats.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 40 Protection of Environment 20 2014-07-01 2013-07-01 true Alternative report formats. 92.405... Reporting Requirements, Voluntary Emission Recall Program § 92.405 Alternative report formats. (a) Any manufacturer or remanufacturer may submit a plan for making either of the reports required by §§ 92.403 and 92...

40 CFR 92.405 - Alternative report formats.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 40 Protection of Environment 20 2011-07-01 2011-07-01 false Alternative report formats. 92.405... Reporting Requirements, Voluntary Emission Recall Program § 92.405 Alternative report formats. (a) Any manufacturer or remanufacturer may submit a plan for making either of the reports required by §§ 92.403 and 92...

40 CFR 92.405 - Alternative report formats.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 40 Protection of Environment 21 2012-07-01 2012-07-01 false Alternative report formats. 92.405... Reporting Requirements, Voluntary Emission Recall Program § 92.405 Alternative report formats. (a) Any manufacturer or remanufacturer may submit a plan for making either of the reports required by §§ 92.403 and 92...

40 CFR 92.405 - Alternative report formats.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 20 2010-07-01 2010-07-01 false Alternative report formats. 92.405... Reporting Requirements, Voluntary Emission Recall Program § 92.405 Alternative report formats. (a) Any manufacturer or remanufacturer may submit a plan for making either of the reports required by §§ 92.403 and 92...

31 CFR 92.16 - Written response.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 31 Money and Finance: Treasury 1 2010-07-01 2010-07-01 false Written response. 92.16 Section 92.16... States Mint § 92.16 Written response. (a) Form and contents. (1) The written response submitted by a... person named in the Initial Notice of Assessment is filing the written response, a copy of the duly...

27 CFR 6.92 - Newspaper cuts.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 27 Alcohol, Tobacco Products and Firearms 1 2011-04-01 2011-04-01 false Newspaper cuts. 6.92 Section 6.92 Alcohol, Tobacco Products and Firearms ALCOHOL AND TOBACCO TAX AND TRADE BUREAU, DEPARTMENT OF THE TREASURY LIQUORS âTIED-HOUSEâ Exceptions § 6.92 Newspaper cuts. Newspaper cuts, mats, or engraved blocks for use in retailers' advertisements...

31 CFR 92.17 - Final action.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 31 Money and Finance: Treasury 1 2011-07-01 2011-07-01 false Final action. 92.17 Section 92.17... Words, Letters, Symbols, or Emblems of the United States Mint § 92.17 Final action. (a) In making a... Notice of Assessment (or on demand under paragraph (c)(3)(ii)(D) of this section), a civil action to...

A 92-kDa human immunostimulatory protein.

PubMed Central

Fontan, E; Briend, E; Saklani-Jusforgues, H; d'Alayer, J; Vandekerckhove, J; Fauve, R M

1994-01-01

We purified to apparent homogeneity a human urinary glycoprotein of 92 kDa (HGP.92) that, administered intravenously at 250 micrograms/kg, fully protected mice against a lethal inoculum of Listeria monocytogenes. Since HGP.92 protected scid mice, which lack B and T lymphocytes, this increased resistance to Listeria did not appear to be lymphocyte mediated. Furthermore, inflammatory macrophages incubated with 6 nM HGP.92 inhibited the growth of Lewis carcinoma cells in vitro. These two activities appeared to depend on an oligosaccharide moiety, as they were lost after N-Glycanase treatment of HGP.92. Thus, the biological activity of HGP.92 was in some way related to a glycan moiety. Images PMID:8078887

7 CFR 966.92 - Amendments.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 8 2010-01-01 2010-01-01 false Amendments. 966.92 Section 966.92 Agriculture Regulations of the Department of Agriculture (Continued) AGRICULTURAL MARKETING SERVICE (Marketing Agreements and Orders; Fruits, Vegetables, Nuts), DEPARTMENT OF AGRICULTURE TOMATOES GROWN IN FLORIDA Order...

Preparation of optically active (2RS,3SR)-2-amino-3-hydroxy-3-phenylpropanoic acid (threo-beta-phenylserine) via optical resolutions by replacing and preferential crystallization.

PubMed

Shiraiwa, Tadashi; Kawashima, Yuka; Ikaritani, Atsushi; Suganuma, Yumiko; Saijoh, Reiichi

2006-08-01

To obtain optically active threo-2-amino-3-hydroxy-3-phenylpropanoic acid (1) via optical resolutions by replacing and preferential crystallization, the racemic structure of (2RS,3SR)-1 hydrochloride [(2RS,3SR)-1.HCl] was examined based on the melting point, solubility, and infrared spectrum. (2RS,3SR)-1.HCl was indicated to exist as a conglomerate at room temperature, although it forms a racemic compound at the melting point. When, in optical resolution by replacing crystallization, L-phenylalanine methyl ester hydrochloride (L-2) was used as the optically active co-solute, (2R,3S)-1.HCl was preferentially crystallized from the supersaturated racemic solution; the use of D-2 as the co-solute afforded (2S,3R)-1.HCl with an optical purity of 95%. In addition, optical resolution by preferential crystallization was successfully achieved to give successively (2R,3S)- and (2S,3R)-1.HCl with optical purities of 90-92%. The (2R,3S)- and (2S,3R)-1.HCl purified by recrystallization from 1-propanol were treated with triethylamine in methanol to give optically pure (2R,3S)- and (2S,3R)-1.

Pioneering better science through the 3Rs: an introduction to the national centre for the replacement, refinement, and reduction of animals in research (NC3Rs).

PubMed

Burden, Natalie; Chapman, Kathryn; Sewell, Fiona; Robinson, Vicky

2015-03-01

The National Centre for the Replacement, Refinement, and Reduction of Animals in Research (NC3Rs) is an independent scientific organization that is based in the United Kingdom, which was set up by the government to lead the discovery and application of new technologies and approaches that minimize the use of animals in research and improve animal welfare. The NC3Rs uses a range of strategies to improve and advance science through application of the 3Rs. These include funding basic research, open innovation (CRACK IT), and programs run by inhouse scientists. We present several case studies from the NC3Rs portfolio, featuring asthma research, the use of nonhuman primates in monoclonal antibody development, and CRACK IT. Finally, we anticipate the future, as we use our experience to move into new research fields and expand toward international collaboration. Here we highlight how equipping scientists with relevant and emerging 3Rs tools can help overcome the challenges and limitations of the use of animals in research to the benefit of the whole bioscience community.

Pioneering Better Science through the 3Rs: An Introduction to the National Centre for the Replacement, Refinement, and Reduction of Animals in Research (NC3Rs)

PubMed Central

Burden, Natalie; Chapman, Kathryn; Sewell, Fiona; Robinson, Vicky

2015-01-01

The National Centre for the Replacement, Refinement, and Reduction of Animals in Research (NC3Rs) is an independent scientific organization that is based in the United Kingdom, which was set up by the government to lead the discovery and application of new technologies and approaches that minimize the use of animals in research and improve animal welfare. The NC3Rs uses a range of strategies to improve and advance science through application of the 3Rs. These include funding basic research, open innovation (CRACK IT), and programs run by inhouse scientists. We present several case studies from the NC3Rs portfolio, featuring asthma research, the use of nonhuman primates in monoclonal antibody development, and CRACK IT. Finally, we anticipate the future, as we use our experience to move into new research fields and expand toward international collaboration. Here we highlight how equipping scientists with relevant and emerging 3Rs tools can help overcome the challenges and limitations of the use of animals in research to the benefit of the whole bioscience community. PMID:25836967

9 CFR 381.92 - Overscald.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 9 Animals and Animal Products 2 2010-01-01 2010-01-01 false Overscald. 381.92 Section 381.92 Animals and Animal Products FOOD SAFETY AND INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE AGENCY... CERTIFICATION POULTRY PRODUCTS INSPECTION REGULATIONS Post Mortem Inspection; Disposition of Carcasses and Parts...

GAPDH rs1136666 SNP indicates a high risk of Parkinson's disease.

PubMed

Ping, Zhang; Xiaomu, Wu; Xufang, Xie; Wenfeng, Cao; Liang, Shao; Tao, Wang

2018-06-07

Development of Parkinson's disease (PD) is attributed to both genetic and environmental factors. Furthermore,GAPDH may play a key role in the development of neurodegenerative disease. Examination of genetic polymorphism in patients with sporadic PD will help uncover the mechanisms of PD pathogenesis and provide new insights into the treatment of PD. The SNaPshot method was applied to determine the gene sequences in 265 patients with idiopathic PD and 269 control cases (sex- and age-matched). The rs1136666 polymorphism of GAPDH was determined to be closely associated with PD. Subsequently, the CC genotype of the rs1136666 fragment was transfected into SH-SY5Y cells via a plasmid. The genetic expression of rs1136666 CC could induce SH-SY5Y cell injury and apoptosis via regulation of the oxidant-antioxidant and apoptosis-antiapoptosis balance. rs1136666 CC of the GAPDH had a pro-apoptotic effect similar to that of rotenone, and combination of the rs1136666 CC genetic variation and the rotenone neurotoxic effect could aggravate oxidative stress, cell injury, and apoptosis better than either single treatment alone. This study confirmed that the rs1136666 CC allele of theGAPDH increased the risk of PD, particularly in older male patients. Copyright © 2018. Published by Elsevier B.V.

40 CFR 180.1114 - Pseudomonas fluorescens A506, Pseudomonas fluorescens 1629RS, and Pseudomonas syringae 742RS...

Code of Federal Regulations, 2013 CFR

2013-07-01

... biological control agent to growing agricultural crops in accordance with good agricultural practices. [57 FR... 742RS; exemptions from the requirement of a tolerance. The biological pesticides Pseudomonas fluorescens...

40 CFR 180.1114 - Pseudomonas fluorescens A506, Pseudomonas fluorescens 1629RS, and Pseudomonas syringae 742RS...

Code of Federal Regulations, 2014 CFR

2014-07-01

... biological control agent to growing agricultural crops in accordance with good agricultural practices. [57 FR... 742RS; exemptions from the requirement of a tolerance. The biological pesticides Pseudomonas fluorescens...

40 CFR 180.1114 - Pseudomonas fluorescens A506, Pseudomonas fluorescens 1629RS, and Pseudomonas syringae 742RS...

Code of Federal Regulations, 2012 CFR

2012-07-01

... biological control agent to growing agricultural crops in accordance with good agricultural practices. [57 FR... 742RS; exemptions from the requirement of a tolerance. The biological pesticides Pseudomonas fluorescens...

40 CFR 180.1114 - Pseudomonas fluorescens A506, Pseudomonas fluorescens 1629RS, and Pseudomonas syringae 742RS...

Code of Federal Regulations, 2010 CFR

2010-07-01

... biological control agent to growing agricultural crops in accordance with good agricultural practices. [57 FR... 742RS; exemptions from the requirement of a tolerance. The biological pesticides Pseudomonas fluorescens...

40 CFR 180.1114 - Pseudomonas fluorescens A506, Pseudomonas fluorescens 1629RS, and Pseudomonas syringae 742RS...

Code of Federal Regulations, 2011 CFR

2011-07-01

... biological control agent to growing agricultural crops in accordance with good agricultural practices. [57 FR... 742RS; exemptions from the requirement of a tolerance. The biological pesticides Pseudomonas fluorescens...

44 CFR 9.2 - Policy.

Code of Federal Regulations, 2010 CFR

2010-10-01

... Agency to provide leadership in floodplain management and the protection of wetlands. Further, the Agency... 44 Emergency Management and Assistance 1 2010-10-01 2010-10-01 false Policy. 9.2 Section 9.2 Emergency Management and Assistance FEDERAL EMERGENCY MANAGEMENT AGENCY, DEPARTMENT OF HOMELAND SECURITY...

9 CFR 92.1 - Definitions.

Code of Federal Regulations, 2010 CFR

2010-01-01

... animal kingdom, except man, including: Cattle, sheep, goats, other ruminants, swine, horses, asses, mules... 9 Animals and Animal Products 1 2010-01-01 2010-01-01 false Definitions. 92.1 Section 92.1 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE EXPORTATION...

Polymorphic Variants rs3088442 and rs2292334 in the Organic Cation Transporter 3 (OCT3) Gene and Susceptibility Against Type 2 Diabetes: Role of their Interaction.

PubMed

Mahrooz, Abdolkarim; Alizadeh, Ahad; Hashemi-Soteh, Mohammad Bagher; Ghaffari-Cherati, Maryam; Hosseyni-Talei, Seyyedeh Raheleh

2017-02-01

In this study, we investigated whether two common variants (rs3088442G>A and rs2292334G>A) in the organic cation transporter 3 (OCT3) gene, a high-capacity transporter widely expressed in various tissues, affect susceptibility to type 2 diabetes (T2D) in patients newly diagnosed with T2D. We performed a study with 150 newly diagnosed patients with T2D and 152 controls. The genetic analyses were performed using the restricted fragment length polymorphism (RFLP) after PCR amplification. For the rs3088442G>A variant, A allele carriers had a significantly lower odds ratio (OR) vs. GG homozygotes in the BMI <30 kg/m 2 group (OR = 0.23, p <0.001) compared with the BMI ≥30 kg/m 2 group (OR = 0.67, p = 0.34). When ORs were adjusted for BMI, age, sex, and blood pressure, our findings showed that the overexpression of the A allele of the rs3088442G>A variant was associated with a decreased risk of T2D (OR = 0.016, p <0.001). A Bayesian logistic model revealed that the interaction of two variants studied were significantly associated with a decreased risk of T2D (OR = 0.61, p = 0.03). The present study has identified the protective effect of the variant rs3088442G>A in the 3'-untranslated region of the OCT3 gene in susceptibility to T2D, and that the protective role is maintained in the presence of risky alleles of the variant rs2292334G>A. The association of the A allele of rs3088442G>A with T2D become weaker in obese people than that of non-obese. If confirmed in other populations, the rs3088442G>A variant as a genetic marker may potentially assist in the identification of individuals at an increased risk of T2D. Copyright © 2017 IMSS. Published by Elsevier Inc. All rights reserved.

High-Speed RaPToRS

NASA Astrophysics Data System (ADS)

Henchen, Robert; Esham, Benjamin; Becker, William; Pogozelski, Edward; Padalino, Stephen; Sangster, Thomas; Glebov, Vladimir

2008-11-01

The High-Speed Rapid Pneumatic Transport of Radioactive Samples (HS-RaPToRS) system, designed to quickly and safely move radioactive materials, was assembled and tested at the Mercury facility of the Naval Research Laboratory (NRL) in Washington D.C. A sample, which is placed inside a four-inch-diameter carrier, is activated before being transported through a PVC tube via airflow. The carrier travels from the reaction chamber to the end station where it pneumatically brakes prior to the gate. A magnetic latch releases the gate when the carrier arrives and comes to rest. The airflow, optical carrier-monitoring devices, and end gate are controlled manually or automatically with LabView software. The installation and testing of the RaPToRS system at NRL was successfully completed with transport times of less than 3 seconds. The speed of the carrier averaged 16 m/s. Prospective facilities for similar systems include the Laboratory for Laser Energetics and the National Ignition Facility.

Meta-analysis of the rs2075650 polymorphism and risk of Alzheimer disease.

PubMed

He, Ya; Li, Chen; Yang, Ying; Li, Yizhou; Wang, Yuan; Yang, Hua; Jin, Tianbo; Chen, Songsheng

2016-10-01

Several researchers have suggested that the rs2075650 polymorphism is significantly associated with an increased risk of developing Alzheimer disease (AD) in European. However, some others found inconsistent results in Asian (Chinese and Korean). We addressed the controversy through performing a meta-analysis of the relationship between rs2075650 in TOMM40 (translocase of outer mitochondrial membrane 40 homologue) and Alzheimer disease. We selected eight case-control studies involving 4290 cases of Alzheimer disease and 5556 healthy individuals. The association between the TOMM40 rs2075650 polymorphism and Alzheimer disease was examined by overall odds ratio (OR) with a 95 % confidence interval (CI). We used different genetic model analysis, sensitivity analysis, and assessments of bias in our meta-analysis. The pooled analysis showed the inconsistent results that TOMM40 rs2075650 polymorphism was associated with Alzheimer disease in European and Korean population in all genetic models, but there was no significant association between the TOMM40 rs2075650 polymorphism and Alzheimer disease risk in Chinese population. We conclude that rs2075650 in TOMM40 gene may increase the risk of Alzheimer disease.

Association between rs6812193 polymorphism and sporadic Parkinson's disease susceptibility.

PubMed

Huo, Qiang; Li, Tao; Zhao, Peiqing; Wang, Lianqing

2015-08-01

Recently, the association of a single nucleotide polymorphism rs6812193 C/T with sporadic Parkinson's disease (PD) susceptibility has been widely evaluated, but the results remained inconsistent. This association should be clarified because of the importance of it on human health and quality of life. We performed a comprehensive meta-analysis to evaluate the association between the rs6812193 polymorphism and sporadic PD. PubMed was used to retrieve articles published up to June 2014 for all studies evaluating the rs6812193 polymorphism and PD in humans. Ethnicity-specific subgroup analysis was also performed based on ethnicity susceptibility. A total of 17 independent study samples (15 Caucasians and 2 Asians) including 17,956 cases and 52,751 controls were used in the presented study. The MAFT (minor allele T frequency) in PD patients of European descent is obviously higher than Asian cases (p < 0.01). The results suggested the rs6812193 polymorphism (allele T vs. C) is significantly associated with PD susceptibility among overall samples (OR 0.882, 95 % CI 0.856-0.908) and Caucasian population (OR 0.881, 95 % CI 0.856-0.907), but not in Asian samples (OR 0.918, 95 % CI 0.721-1.168). No evidence of publication bias was observed. Throughout our analysis, the rs6812193 polymorphism is significantly associated with sporadic PD susceptibility in Caucasian samples, and ethnicity might be the key point of inconsistency in rs6812193 studies. Further studies are warranted to re-examine the observed associations, especially in different ethnicities.

Adsorption of a textile dye "Indanthrene Blue RS (C.I. Vat Blue 4)" from aqueous solutions onto smectite-rich clayey rock.

PubMed

Chaari, Islem; Feki, Mongi; Medhioub, Mounir; Bouzid, Jalel; Fakhfakh, Emna; Jamoussi, Fakher

2009-12-30

The adsorption of a textile dye, namely, Indanthrene Blue RS (C.I. Vat Blue 4) onto smectite-rich clayey rock (AYD) and its sulphuric acid-activated products (AYDS) in aqueous solution was studied in a batch system with respect to contact time, pH, and temperature. The adsorbents employed were characterized by X-ray diffraction, infrared spectroscopy and specific surface area, cation exchange capacity and point of zero charge were also estimated. The effect of contact time on dye adsorption showed that the equilibrium was reached after a contact time of 40 min for the both adsorbents. The optimum pH for dye retention was found 6.0 for AYDS and 7.3 for AYD. The equilibrium adsorption data were analysed using the Langmuir and Freundlich isotherms. The adsorption capacities (Q(m)) for AYD and AYDS were found 13.92 mg/g and 17.85 mg/g, respectively. The effect of temperature on the adsorption was also investigated; adsorption of Indanthrene Blue RS is an endothermic process. This study demonstrates that all the considered adsorbents can be used as an alternative emerging technology for water treatment.

1 CFR 9.2 - Scope.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 1 General Provisions 1 2011-01-01 2011-01-01 false Scope. 9.2 Section 9.2 General Provisions ADMINISTRATIVE COMMITTEE OF THE FEDERAL REGISTER SPECIAL EDITIONS OF THE FEDERAL REGISTER THE UNITED STATES... include— (1) Descriptions of the agency's public purposes, programs and functions; (2) Established places...

1 CFR 9.2 - Scope.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 1 General Provisions 1 2010-01-01 2010-01-01 false Scope. 9.2 Section 9.2 General Provisions ADMINISTRATIVE COMMITTEE OF THE FEDERAL REGISTER SPECIAL EDITIONS OF THE FEDERAL REGISTER THE UNITED STATES... include— (1) Descriptions of the agency's public purposes, programs and functions; (2) Established places...

28 CFR 92.1 - Scope.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 28 Judicial Administration 2 2010-07-01 2010-07-01 false Scope. 92.1 Section 92.1 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police... educational expense reimbursements to individuals who agree to serve as a State or local police officer or...

9 CFR 3.92 - Handling.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 9 Animals and Animal Products 1 2012-01-01 2012-01-01 false Handling. 3.92 Section 3.92 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE ANIMAL...: (1) Shelter from sunlight and extreme heat. Sufficient shade must be provided to protect the nonhuman...

9 CFR 3.92 - Handling.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 9 Animals and Animal Products 1 2014-01-01 2014-01-01 false Handling. 3.92 Section 3.92 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE ANIMAL...: (1) Shelter from sunlight and extreme heat. Sufficient shade must be provided to protect the nonhuman...

9 CFR 3.92 - Handling.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 9 Animals and Animal Products 1 2013-01-01 2013-01-01 false Handling. 3.92 Section 3.92 Animals and Animal Products ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE ANIMAL...: (1) Shelter from sunlight and extreme heat. Sufficient shade must be provided to protect the nonhuman...

1 CFR 9.2 - Scope.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 1 General Provisions 1 2012-01-01 2012-01-01 false Scope. 9.2 Section 9.2 General Provisions ADMINISTRATIVE COMMITTEE OF THE FEDERAL REGISTER SPECIAL EDITIONS OF THE FEDERAL REGISTER THE UNITED STATES... include— (1) Descriptions of the agency's legal authorities, public purposes, programs, and functions; (2...

1 CFR 9.2 - Scope.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 1 General Provisions 1 2013-01-01 2012-01-01 true Scope. 9.2 Section 9.2 General Provisions ADMINISTRATIVE COMMITTEE OF THE FEDERAL REGISTER SPECIAL EDITIONS OF THE FEDERAL REGISTER THE UNITED STATES... include— (1) Descriptions of the agency's legal authorities, public purposes, programs, and functions; (2...

1 CFR 9.2 - Scope.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 1 General Provisions 1 2014-01-01 2012-01-01 true Scope. 9.2 Section 9.2 General Provisions ADMINISTRATIVE COMMITTEE OF THE FEDERAL REGISTER SPECIAL EDITIONS OF THE FEDERAL REGISTER THE UNITED STATES... include— (1) Descriptions of the agency's legal authorities, public purposes, programs, and functions; (2...

Crystal structures of apo wild-type M. jannaschii tyrosyl-tRNA synthetase (TyrRS) and an engineered TyrRS specific for O-methyl-L-tyrosine

PubMed Central

Zhang, Yan; Wang, Lei; Schultz, Peter G.; Wilson, Ian A.

2005-01-01

The Methanococcus jannaschii tRNATyr/TyrRS pair has been engineered to incorporate unnatural amino acids into proteins in E. coli. To reveal the structural basis for the altered specificity of mutant TyrRS for O-methyl-l-tyrosine (OMeTyr), the crystal structures for the apo wild-type and mutant M. jannaschii TyrRS were determined at 2.66 and 3.0 Å, respectively, for comparison with the published structure of TyrRS complexed with tRNATyr and substrate tyrosine. A large conformational change was found for the anticodon recognition loop 257–263 of wild-type TyrRS upon tRNA binding in order to facilitate recognition of G34 of the anticodon loop through π-stacking and hydrogen bonding interactions. Loop 133–143, which is close to the tRNA acceptor stem-binding site, also appears to be stabilized by interaction with the tRNATyr. Binding of the substrate tyrosine results in subtle and cooperative movements of the side chains within the tyrosine-binding pocket. In the OMeTyr-specific mutant synthetase structure, the signature motif KMSKS loop and acceptor stem-binding loop 133–143 were surprisingly ordered in the absence of bound ATP and tRNA. The active-site mutations result in altered hydrogen bonding and steric interactions which favor binding of OMeTyr over l-tyrosine. The structure of the mutant and wild-type TyrRS now provide a basis for generating new active-site libraries to evolve synthetases specific for other unnatural amino acids. PMID:15840835

Optical and UV spectra of RS CVn stars

NASA Technical Reports Server (NTRS)

Ramsey, Lawrence W.

1990-01-01

The observed phenomenology in RS CVn and related binary systems is considered in terms of its modeling according to solar activity by examining UV and optical spectroscopy. Current data are examined to validate the existence of cool starspots, plage, prominences, and flares, as well as to determine the consistency of spatial correlations given by these data. RS CVn stars show spots at or near the poles, contrasting the low latitudes of solar spots; plage appears to be associated with cool spots on BY Draconis-like systems; plage and prominences, although identified as distinct phenomena, are theorized to be the same event in some cases. More spectroscopic and photometric observations are proposed to identify the detailed structure and locations of spots. UV and visible data are also required to distinguish plage regions from flare variations as well as determine the relation of extended structures to starspot and plage phenomena in RS CVn systems.

Study on parallel and distributed management of RS data based on spatial database

NASA Astrophysics Data System (ADS)

Chen, Yingbiao; Qian, Qinglan; Wu, Hongqiao; Liu, Shijin

2009-10-01

With the rapid development of current earth-observing technology, RS image data storage, management and information publication become a bottle-neck for its appliance and popularization. There are two prominent problems in RS image data storage and management system. First, background server hardly handle the heavy process of great capacity of RS data which stored at different nodes in a distributing environment. A tough burden has put on the background server. Second, there is no unique, standard and rational organization of Multi-sensor RS data for its storage and management. And lots of information is lost or not included at storage. Faced at the above two problems, the paper has put forward a framework for RS image data parallel and distributed management and storage system. This system aims at RS data information system based on parallel background server and a distributed data management system. Aiming at the above two goals, this paper has studied the following key techniques and elicited some revelatory conclusions. The paper has put forward a solid index of "Pyramid, Block, Layer, Epoch" according to the properties of RS image data. With the solid index mechanism, a rational organization for different resolution, different area, different band and different period of Multi-sensor RS image data is completed. In data storage, RS data is not divided into binary large objects to be stored at current relational database system, while it is reconstructed through the above solid index mechanism. A logical image database for the RS image data file is constructed. In system architecture, this paper has set up a framework based on a parallel server of several common computers. Under the framework, the background process is divided into two parts, the common WEB process and parallel process.

7 CFR 1000.91-1000.92 - [Reserved

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 9 2010-01-01 2009-01-01 true [Reserved] 1000.91-1000.92 Section 1000.91-1000.92 Agriculture Regulations of the Department of Agriculture (Continued) AGRICULTURAL MARKETING SERVICE (Marketing... Miscellaneous Provisions §§ 1000.91-1000.92 [Reserved] ...

NASA/GSFC Scanning Raman Lidar Measurements of Water Vapor and Cirrus Clouds during WVIOP2000 and AFWEX

NASA Technical Reports Server (NTRS)

Whiteman, D. N.; Evans, K. D.; DiGirolamo, P.; Demoz, B. B.; Turner, D.; Comstock, J.; Ismail, S.; Ferrare, R. A.; Browell, E. V.; Goldsmith, J. E. M.;

The FIRO-2017 Field Campaign: Findings from a Unique Observing Period in the Russian River Watershed in Northern California during Jan - Mar 2017

NASA Astrophysics Data System (ADS)

Wilson, A. M.; Ralph, M.; Demirdjian, R.; Kawzenuk, B.; Cannon, F.; Cordeira, J. M.

2017-12-01

Forecast Informed Reservoir Operations (FIRO) is a proposed water management strategy that aims to improve water supply, maintain reduction in flood risk, and achieve ecosystem sustainability using data from state of the art watershed monitoring and weather and water forecasting. The first testbed for this strategy is Lake Mendocino, in the Russian River Watershed in northern California. In order to accomplish these goals, it is necessary to understand and better predict Atmospheric Rivers (ARs), which provide 50% of the annual precipitation, and cause most of the heavy rain and flood events in this watershed. To support this effort, a field campaign was held during January-March 2017 in the Russian River Watershed with the science objectives of understanding AR evolution as the AR makes landfall and interacts with terrain, assess reasons for additional variance in the relationship between storm total precipitation and bulk water vapor flux, and to form a unique database for model verification. Coastal and inland field sites equipped with multiple ground-based sensors as well as Vaisala radiosonde systems were deployed to support these objectives. The 2017 water year was among the wettest recorded in California. During the January-March 2017 period, the coastal/inland pair of radiosonde systems captured 13 storms with maximum integrated vapor transport (IVT) values nearing 1200 kg/m/s. This presentation will provide an overview of the water year and the field campaign observations. Results indicate that bulk upslope water vapor flux measured by the ARO, which is the measurement regularly available to forecasters and researchers, correlates extremely well with integrated vapor transport (IVT). The profiles of water vapor flux observed by the coastal and inland sites are very different both in maximum flux magnitude and height of the maximum flux.

Sigma receptors [σRs]: biology in normal and diseased states

PubMed Central

Rousseaux, Colin G.; Greene, Stephanie F.

2016-01-01

Abstract This review compares the biological and physiological function of Sigma receptors [σRs] and their potential therapeutic roles. Sigma receptors are widespread in the central nervous system and across multiple peripheral tissues. σRs consist of sigma receptor one (σ1R) and sigma receptor two (σ2R) and are expressed in numerous regions of the brain. The sigma receptor was originally proposed as a subtype of opioid receptors and was suggested to contribute to the delusions and psychoses induced by benzomorphans such as SKF-10047 and pentazocine. Later studies confirmed that σRs are non-opioid receptors (not an µ opioid receptor) and play a more diverse role in intracellular signaling, apoptosis and metabolic regulation. σ1Rs are intracellular receptors acting as chaperone proteins that modulate Ca2+ signaling through the IP3 receptor. They dynamically translocate inside cells, hence are transmembrane proteins. The σ1R receptor, at the mitochondrial-associated endoplasmic reticulum membrane, is responsible for mitochondrial metabolic regulation and promotes mitochondrial energy depletion and apoptosis. Studies have demonstrated that they play a role as a modulator of ion channels (K+ channels; N-methyl-d-aspartate receptors [NMDAR]; inositol 1,3,5 triphosphate receptors) and regulate lipid transport and metabolism, neuritogenesis, cellular differentiation and myelination in the brain. σ1R modulation of Ca2+ release, modulation of cardiac myocyte contractility and may have links to G-proteins. It has been proposed that σ1Rs are intracellular signal transduction amplifiers. This review of the literature examines the mechanism of action of the σRs, their interaction with neurotransmitters, pharmacology, location and adverse effects mediated through them. PMID:26056947

28 CFR 92.8 - Providing recruitment services.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 28 Judicial Administration 2 2012-07-01 2012-07-01 false Providing recruitment services. 92.8 Section 92.8 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.8 Providing recruitment services. The...

28 CFR 92.8 - Providing recruitment services.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 28 Judicial Administration 2 2014-07-01 2014-07-01 false Providing recruitment services. 92.8 Section 92.8 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.8 Providing recruitment services. The...

28 CFR 92.8 - Providing recruitment services.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 28 Judicial Administration 2 2013-07-01 2013-07-01 false Providing recruitment services. 92.8 Section 92.8 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.8 Providing recruitment services. The...

28 CFR 92.8 - Providing recruitment services.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 28 Judicial Administration 2 2011-07-01 2011-07-01 false Providing recruitment services. 92.8 Section 92.8 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.8 Providing recruitment services. The...

The large outbursts studied by small telescopes - the case of RS Oph

NASA Astrophysics Data System (ADS)

Kundra, E.; Hric, L.

2014-03-01

Cataclysmic variables (CVs) are one of the dominant part in astronomical research. Small telescopes are widely used to search for the sudden brightening of such stars. We present our experience with observations of the RS Ophiuchi (RS Oph) and analyses of the light curves. RS Oph is a binary system with 6 recorded outbursts classified as a recurrent nova (RN). We used the telescopes of AI SAS to measure the brightness of RS Oph after its last outburst occurred on February 12, 2006. The new observations indicate the ongoing mass transfer. % and the estimation of the mass transfer rate allow to make a prediction of the %next outburst of this RN.

Association study of IL28B: rs12979860 and rs8099917 polymorphisms with SVR in patients infected with chronic HCV genotype 1 to PEG-INF/RBV therapy using systematic meta-analysis.

PubMed

Luo, Yueqiu; Jin, Caixia; Ling, Zongxin; Mou, Xiaozhou; Zhang, Qiong; Xiang, Charlie

2013-01-25

Recently, genome-wide associated studies (GWAS) have identified that host genetics IL28B SNPs rs12979860 and rs8099917 were significantly associated with SVR in patients infected with chronic HCV genotype 1 to PEG-INF/RBV therapy. Results from these studies remain conflicting. We conducted this meta-analysis to estimate the overall association of SVR with rs12979860 and rs8099917. We searched the PubMed, Embase, Scholar Google, ISI Web of Knowledge, and Chinese National Knowledge Infrastructure (CNKI) databases for all articles before July 30, 2012. The odds ratio (OR) corresponding to the 95% confidence interval (CI) was used to assess the association. The statistical heterogeneity among studies was assessed with the I(2) statistics. Begg's test and Egger's test were performed to evaluate the publication bias. Eventually, twenty studies were selected for the meta-analysis. The IL-28B SNPs rs12979860 genotype CC and rs8099917 genotype TT significantly positive associated with SVR in patients infected chronic HCV genotype 1 to PEG-INF/RBV therapy (OR=4.473, 95% CI=3.814-5.246, OR=5.171, 95% CI=4.372-6.117 respectively). The results suggested that rs12979860 genotype CC and rs8099917 genotype TT could be used as independent predictors of the HCV-1 infected patients. Copyright © 2012 Elsevier B.V. All rights reserved.

28 CFR 92.12 - Program funding length.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 28 Judicial Administration 2 2011-07-01 2011-07-01 false Program funding length. 92.12 Section 92.12 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.12 Program funding length. Funding for these...

28 CFR 92.12 - Program funding length.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 28 Judicial Administration 2 2014-07-01 2014-07-01 false Program funding length. 92.12 Section 92.12 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.12 Program funding length. Funding for these...

28 CFR 92.12 - Program funding length.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 28 Judicial Administration 2 2012-07-01 2012-07-01 false Program funding length. 92.12 Section 92.12 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.12 Program funding length. Funding for these...

28 CFR 92.12 - Program funding length.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 28 Judicial Administration 2 2013-07-01 2013-07-01 false Program funding length. 92.12 Section 92.12 Judicial Administration DEPARTMENT OF JUSTICE (CONTINUED) OFFICE OF COMMUNITY ORIENTED POLICING SERVICES (COPS) Police Recruitment Program Guidelines § 92.12 Program funding length. Funding for these...