Ran Fu | NREL

Science.gov Websites

Ran Fu Photo of Ran Fu Ran Fu Researcher IV-Economic/Financial Analysis Ran.Fu@nrel.gov | 303-384 -7522 Ran Fu is a member of the Techno-Economic Analysis Group in the Strategic Energy Analysis Center . Areas of Expertise Technology, policy, and economic analysis for public- and private-sector's R&D

Ran-binding protein 5 (RanBP5) is related to the nuclear transport factor importin-beta but interacts differently with RanBP1.

PubMed Central

Deane, R; Schäfer, W; Zimmermann, H P; Mueller, L; Görlich, D; Prehn, S; Ponstingl, H; Bischoff, F R

1997-01-01

We report the identification and characterization of a novel 124-kDa Ran binding protein, RanBP5. This protein is related to importin-beta, the key mediator of nuclear localization signal (NLS)-dependent nuclear transport. RanBP5 was identified by two independent methods: it was isolated from HeLa cells by using its interaction with RanGTP in an overlay assay to monitor enrichment, and it was also found by the yeast two-hybrid selection method with RanBP1 as bait. RanBP5 binds to RanBP1 as part of a trimeric RanBP1-Ran-RanBP5 complex. Like importin-beta, RanBP5 strongly binds the GTP-bound form of Ran, stabilizing it against both intrinsic and RanGAP1-induced GTP hydrolysis and also against nucleotide exchange. The GAP resistance of the RanBP5-RanGTP complex can be relieved by RanBP1, which might reflect an in vivo role for RanBP1. RanBP5 is a predominantly cytoplasmic protein that can bind to nuclear pore complexes. We propose that RanBP5 is a mediator of a nucleocytoplasmic transport pathway that is distinct from the importin-alpha-dependent import of proteins with a classical NLS. PMID:9271386

77 FR 32978 - Exxon Valdez Oil Spill Trustee Council; Notice of Meeting

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-04

... DEPARTMENT OF THE INTERIOR Office of the Secretary Exxon Valdez Oil Spill Trustee Council; Notice of Meeting AGENCY: Office of the Secretary, Department of the Interior. ACTION: Notice of meeting... Exxon Valdez Oil Spill Public Advisory Committee. DATES: July 9, 2012, at 10 a.m. ADDRESSES: Glenn Olds...

Ecological Disaster and Rhetorical Response: Exxon's Communications in the Wake of the Valdez Spill.

ERIC Educational Resources Information Center

Tyler, Lisa

1992-01-01

Examines Exxon's communication efforts in the wake of the Exxon Valdez oil spill disaster. Identifies communication practices that damaged the corporation's credibility, antagonized the public, and contributed to the public perception of its corporate arrogance. Notes that the Valdez spill makes a good case for classroom study. (PRA)

An Arabidopsis Ran-binding protein, AtRanBP1c, is a co-activator of Ran GTPase-activating protein and requires the C-terminus for its cytoplasmic localization

NASA Technical Reports Server (NTRS)

Kim, Soo-Hwan; Roux, Stanley J.

2003-01-01

Ran-binding proteins (RanBPs) are a group of proteins that bind to Ran (Ras-related nuclear small GTP-binding protein), and thus either control the GTP/GDP-bound states of Ran or help couple the Ran GTPase cycle to a cellular process. AtRanBP1c is a Ran-binding protein from Arabidopsis thaliana (L.) Heynh. that was recently shown to be critically involved in the regulation of auxin-induced mitotic progression [S.-H. Kim et al. (2001) Plant Cell 13:2619-2630]. Here we report that AtRanBP1c inhibits the EDTA-induced release of GTP from Ran and serves as a co-activator of Ran-GTPase-activating protein (RanGAP) in vitro. Transient expression of AtRanBP1c fused to a beta-glucuronidase (GUS) reporter reveals that the protein localizes primarily to the cytosol. Neither the N- nor C-terminus of AtRanBP1c, which flank the Ran-binding domain (RanBD), is necessary for the binding of PsRan1-GTP to the protein, but both are needed for the cytosolic localization of GUS-fused AtRanBP1c. These findings, together with a previous report that AtRanBP1c is critically involved in root growth and development, imply that the promotion of GTP hydrolysis by the Ran/RanGAP/AtRanBP1c complex in the cytoplasm, and the resulting concentration gradient of Ran-GDP to Ran-GTP across the nuclear membrane could be important in the regulation of auxin-induced mitotic progression in root tips of A. thaliana.

TAKING SCIENTIFIC ADVANTAGE OF A DISASTROUS OIL SPILL

EPA Science Inventory

On 19 January 1996, the North Cape barge ran aground on Moonstone Beach in southern Rhode Island, releasing 828,000 gallons of refined oil. This opportunistic study was designed to take scientific advantage of the most severely affected seabird, the common loon (Gavia immer) . As...

Reassessment of seismically induced, tsunamigenic submarine slope failures in Port Valdez, Alaska, USA

USGS Publications Warehouse

Lee, H.J.; Haeussler, P.J.; Kayen, R.E.; Hampton, M.A.; Locat, Jacques; Suleimani, E.; Alexander, C.R.

2007-01-01

The M9.2 Alaska earthquake of 1964 caused major damage to the port facilities and town of Valdez, most of it the result of submarine landslide and the consequent tsunamis. Recent bathymetric multibeam surveys, high-resolution subbottom profiles, and dated sediment cores in Port Valdez supply new information about the morphology and character of the landslide deposits. A comparison of pre- and post-earthquake bathymetry provides an estimate of the net volume of landslide debris deposited in the basin and the volume of sediment removed from the source region. Landslide features include (1) large blocks (up to 40-m high) near the location of the greatest tsunamiwave runup (~50 m), (2) two debris lobes associated with the blocks, (3) a series of gullies, channels and talus, near the fjord-head delta and badly damaged old town of Valdez, and (4) the front of a debris lobe that flowed half-way down the fjord from the east end.

Hard aground: the story of the Argo Merchant oil spill

DOE Office of Scientific and Technical Information (OSTI.GOV)

Winslow, R.

1978-01-01

On December 15, 1976, the Argo Merchant, an aging Liberian tanker, went aground on a sandy shoal southeast of Nantucket Island with 7.6 million gallons of industrial heating oil aboard. So begins the story of the largest coastal oil spill in the U.S. history. This book focuses on the effort to save the crew and cargo of the Argo Merchant from the fifty-knot winds and towering seas of a North Atlantic gale. At the center of the story is the U.S. Coast Guard Atlantic Strike Team. Specially trained to fight oil spills, the team was lowered by helicopter to themore » pitching deck of the dead vessel. After six tense days, they had to admit defeat. The Argo Merchant could not be refloated, and the violent seas prevented off-loading the oil onto another vessel. Under the pounding of the waves, the Argo Merchant had begun to break up. This men-against-the-sea tale and documentary show how vulnerable the nation's coastline is to oil spills. In this case, the entire cargo drifted out to sea, but next time we may not be so lucky. Every day, the United States imports the equivalent of more than forty Argo Merchants full of oil, much of it in outdated, marginally operated ships like the Argo Merchant itself.« less

Mesquite's Hull is lowered to its final resting place in ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

Mesquite's Hull is lowered to its final resting place in Lake Superior. The tender ran aground on rocks several months earlier and was battered by winter storms. The wrecked vessel became part of an underwater preserve and is regularly visited by recreational divers - U.S. Coast Guard Cutter MESQUITE, Charlevoix, Charlevoix County, MI

RanBP2 modulates Cox11 and hexokinase I activities and haploinsufficiency of RanBP2 causes deficits in glucose metabolism.

PubMed

Aslanukov, Azamat; Bhowmick, Reshma; Guruju, Mallikarjuna; Oswald, John; Raz, Dorit; Bush, Ronald A; Sieving, Paul A; Lu, Xinrong; Bock, Cheryl B; Ferreira, Paulo A

2006-10-01

The Ran-binding protein 2 (RanBP2) is a large multimodular and pleiotropic protein. Several molecular partners with distinct functions interacting specifically with selective modules of RanBP2 have been identified. Yet, the significance of these interactions with RanBP2 and the genetic and physiological role(s) of RanBP2 in a whole-animal model remain elusive. Here, we report the identification of two novel partners of RanBP2 and a novel physiological role of RanBP2 in a mouse model. RanBP2 associates in vitro and in vivo and colocalizes with the mitochondrial metallochaperone, Cox11, and the pacemaker of glycolysis, hexokinase type I (HKI) via its leucine-rich domain. The leucine-rich domain of RanBP2 also exhibits strong chaperone activity toward intermediate and mature folding species of Cox11 supporting a chaperone role of RanBP2 in the cytosol during Cox11 biogenesis. Cox11 partially colocalizes with HKI, thus supporting additional and distinct roles in cell function. Cox11 is a strong inhibitor of HKI, and RanBP2 suppresses the inhibitory activity of Cox11 over HKI. To probe the physiological role of RanBP2 and its role in HKI function, a mouse model harboring a genetically disrupted RanBP2 locus was generated. RanBP2(-/-) are embryonically lethal, and haploinsufficiency of RanBP2 in an inbred strain causes a pronounced decrease of HKI and ATP levels selectively in the central nervous system. Inbred RanBP2(+/-) mice also exhibit deficits in growth rates and glucose catabolism without impairment of glucose uptake and gluconeogenesis. These phenotypes are accompanied by a decrease in the electrophysiological responses of photosensory and postreceptoral neurons. Hence, RanBP2 and its partners emerge as critical modulators of neuronal HKI, glucose catabolism, energy homeostasis, and targets for metabolic, aging disorders and allied neuropathies.

Self-Fashioning through Glamour and Punk in East Los Angeles: Patssi Valdez in Asco's "Instant Mural" and "A La Mode"

ERIC Educational Resources Information Center

McMahon, Marci R.

2011-01-01

Patssi Valdez, one of the most influential yet understudied female artists of the Chicana/o movement, was the only original and long-term female member of the 1970s art collective Asco. Through the visual discourses of pachuca glamour and punk, Valdez negotiated and exploited the gendered ideologies that visually put her at the center of the…

Modulation of Ca(v)3.1 T-type Ca2+ channels by the ran binding protein RanBPM.

PubMed

Kim, Taehyun; Kim, Sunoh; Yun, Hyung-Mun; Chung, Kwang Chul; Han, Ye Sun; Shin, Hee-Sup; Rhim, Hyewhon

2009-01-02

In order to study the currently unknown cellular signaling pathways of Ca(v)3.1 T-type Ca(2+) channels (Ca(v)3.1 channels), we performed a yeast two-hybrid screening using intracellular domains of Ca(v)3.1 alpha1 subunit as bait. After screening the human brain cDNA library, several proteins, including RanBPM, were identified as interacting with Ca(v)3.1 channels. RanBPM was found to bind to the cytoplasmic intracellular loop between transmembrane domains I and II of Ca(v)3.1 channels. Using whole-cell patch-clamp techniques, we found that Ca(v)3.1 currents were increased by the expression of RanBPM in HEK293/Ca(v)3.1 cells. We next examined whether RanBPM affected the biophysical properties and plasma membrane expression of Ca(v)3.1 channels. Furthermore, we showed that the PKC activator inhibited Ca(v)3.1 currents, an effect that was abolished by the expression of RanBPM. These results suggest that RanBPM could be a key regulator of Ca(v)3.1 channel-mediated signaling pathways.

A New Formulation for Hybrid LES-RANS Computations

NASA Technical Reports Server (NTRS)

Woodruff, Stephen L.

2013-01-01

Ideally, a hybrid LES-RANS computation would employ LES only where necessary to make up for the failure of the RANS model to provide sufficient accuracy or to provide time-dependent information. Current approaches are fairly restrictive in the placement of LES and RANS regions; an LES-RANS transition in a boundary layer, for example, yields an unphysical log-layer shift. A hybrid computation is formulated here to allow greater control over the placement of LES and RANS regions and the transitions between them. The concept of model invariance is introduced, which provides a basis for interpreting hybrid results within an LES-RANS transition zone. Consequences of imposing model invariance include the addition of terms to the governing equations that compensate for unphysical gradients created as the model changes between RANS and LES. Computational results illustrate the increased accuracy of the approach and its insensitivity to the location of the transition and to the blending function employed.

The RanBP2/RanGAP1*SUMO1/Ubc9 SUMO E3 ligase is a disassembly machine for Crm1-dependent nuclear export complexes

PubMed Central

Ritterhoff, Tobias; Das, Hrishikesh; Hofhaus, Götz; Schröder, Rasmus R.; Flotho, Annette; Melchior, Frauke

2016-01-01

Continuous cycles of nucleocytoplasmic transport require disassembly of transport receptor/Ran-GTP complexes in the cytoplasm. A basic disassembly mechanism in all eukaryotes depends on soluble RanGAP and RanBP1. In vertebrates, a significant fraction of RanGAP1 stably interacts with the nucleoporin RanBP2 at a binding site that is flanked by FG-repeats and Ran-binding domains, and overlaps with RanBP2's SUMO E3 ligase region. Here, we show that the RanBP2/RanGAP1*SUMO1/Ubc9 complex functions as an autonomous disassembly machine with a preference for the export receptor Crm1. We describe three in vitro reconstituted disassembly intermediates, which show binding of a Crm1 export complex via two FG-repeat patches, cargo-release by RanBP2's Ran-binding domains and retention of free Crm1 at RanBP2 after Ran-GTP hydrolysis. Intriguingly, all intermediates are compatible with SUMO E3 ligase activity, suggesting that the RanBP2/RanGAP1*SUMO1/Ubc9 complex may link Crm1- and SUMO-dependent functions. PMID:27160050

Polynuclear Aromatic Hydrocarbons in Port Valdez Shrimp and Sediment.

PubMed

Carls, Mark G; Holland, Larry; Pihl, Erik; Zaleski, Marilyn A; Moran, John; Rice, Stanley D

2016-07-01

Polynuclear aromatic hydrocarbons (PAHs) from oil were present in some shrimp from Port Valdez, site of a ballast water treatment facility at the Alyeska Alaska Marine Terminal (AMT). Low-level petrogenic PAH concentrations were generally restricted to shrimp eggs in the vicinity of the AMT and extended along the southern shore of Port Valdez to Anderson Bay. Eggs had greater lipid content than other tissues and thus were the most vulnerable biological compartment to hydrocarbon accumulation. Petrogenic hydrocarbons were not observed in shrimp muscle and cephalothoraxes; thus, these tissues do not pose a human health risk. Risk for children older than age 2 years and adults consuming eggs also was low except for two unusual samples (of 32), collected about 17 km west of the treatment facility. In general, PAH loads were consistent with local time series data in other species. We infer that the accumulation mechanism was dissolved uptake from water, consistent with passive sampler observations completed more than a decade earlier. Hydrocarbon levels in the majority of samples were below toxic thresholds. Total PAH accumulation was substantially greater in some pink shrimp than in other species, thus differences in habitat utilization (muddy vs. rocky substrate) are potentially important.

Decomposing the relation between Rapid Automatized Naming (RAN) and reading ability.

PubMed

Arnell, Karen M; Joanisse, Marc F; Klein, Raymond M; Busseri, Michael A; Tannock, Rosemary

2009-09-01

The Rapid Automatized Naming (RAN) test involves rapidly naming sequences of items presented in a visual array. RAN has generated considerable interest because RAN performance predicts reading achievement. This study sought to determine what elements of RAN are responsible for the shared variance between RAN and reading performance using a series of cognitive tasks and a latent variable modelling approach. Participants performed RAN measures, a test of reading speed and comprehension, and six tasks, which tapped various hypothesised components of the RAN. RAN shared 10% of the variance with reading comprehension and 17% with reading rate. Together, the decomposition tasks explained 52% and 39% of the variance shared between RAN and reading comprehension and between RAN and reading rate, respectively. Significant predictors suggested that working memory encoding underlies part of the relationship between RAN and reading ability.

Biodegradability Of Lingering Crude Oil 19 Years After The Exxon Valdez Oil Spill

EPA Science Inventory

In 2001 and 2003, geospatial surveys of lingering oil were conducted in Prince William Sound (PWS) resulting in a prediction of significant acreage being contaminated with substantial subsurface oil from the 1989 Exxon Valdez oil spill (EVOS). In 2007, other researchers d...

Analysis of Ran related to pesticide resistance in Drosophila Kc cells.

PubMed

Bo, Qian; Chen, Lu; Liu, Yahui; Chang, Chunjie; Ying, Xiaoli; Li, Fengliang; Cheng, Luogen

2018-07-15

Pesticides have been used extensively for pest control, resulting in serious pesticide resistance. It is extremely valuable to identify the resistance genes related to pest control. In our previous studies, we reported that Ran is the deltamethrin (DM) resistance-associated gene. To clarify whether Ran is also related to the resistance of other pesticides, we selected four kinds of pesticides, including parathion, DDT, carbaryl and pleocidin, for further study. The results showed that Ran could be up-regulated by all pesticides. We further verified the relationship between Ran and resistance to the 4 pesticides by Ran RNAi, Ran overexpression and cell apoptosis. We found that the dsRNA of Ran induced more cell apoptosis than the control. Ran overexpression can significantly improve cell tolerance to various pesticides. These results demonstrate that Ran is associated with the resistance to and tolerance of multiple pesticides. Our evidence suggests the Ran is a potential molecular target gene of resistance control. Copyright © 2018 Elsevier B.V. All rights reserved.

Reducing RANS Model Error Using Random Forest

NASA Astrophysics Data System (ADS)

Wang, Jian-Xun; Wu, Jin-Long; Xiao, Heng; Ling, Julia

2016-11-01

Reynolds-Averaged Navier-Stokes (RANS) models are still the work-horse tools in the turbulence modeling of industrial flows. However, the model discrepancy due to the inadequacy of modeled Reynolds stresses largely diminishes the reliability of simulation results. In this work we use a physics-informed machine learning approach to improve the RANS modeled Reynolds stresses and propagate them to obtain the mean velocity field. Specifically, the functional forms of Reynolds stress discrepancies with respect to mean flow features are trained based on an offline database of flows with similar characteristics. The random forest model is used to predict Reynolds stress discrepancies in new flows. Then the improved Reynolds stresses are propagated to the velocity field via RANS equations. The effects of expanding the feature space through the use of a complete basis of Galilean tensor invariants are also studied. The flow in a square duct, which is challenging for standard RANS models, is investigated to demonstrate the merit of the proposed approach. The results show that both the Reynolds stresses and the propagated velocity field are improved over the baseline RANS predictions. SAND Number: SAND2016-7437 A

RanBPM (RanBP9) regulates mouse c-Kit receptor level and is essential for normal development of bone marrow progenitor cells

PubMed Central

Singh, Satyendra; Klarmann, Kimberly D.; Coppola, Vincenzo; Keller, Jonathan R.; Tessarollo, Lino

2016-01-01

c-Kit is a tyrosine kinase receptor important for gametogenesis, hematopoiesis, melanogenesis and mast cell biology. Dysregulation of c-Kit function is oncogenic and its expression in the stem cell niche of a number of tissues has underlined its relevance for regenerative medicine and hematopoietic stem cell biology. Yet, very little is known about the mechanisms that control c-Kit protein levels. Here we show that the RanBPM/RanBP9 scaffold protein binds to c-Kit and is necessary for normal c-Kit protein expression in the mouse testis and subset lineages of the hematopoietic system. RanBPM deletion causes a reduction in c-Kit protein but not its mRNA suggesting a posttranslational mechanism. This regulation is specific to the c-Kit receptor since RanBPM reduction does not affect other membrane proteins examined. Importantly, in both mouse hematopoietic system and testis, RanBPM deficiency causes defects consistent with c-Kit loss of expression suggesting that RanBPM is an important regulator of c-Kit function. The finding that this regulatory mechanism is also present in human cells expressing endogenous RanBPM and c-Kit suggests a potential new strategy to target oncogenic c-Kit in malignancies. PMID:27835883

RanBPM (RanBP9) regulates mouse c-Kit receptor level and is essential for normal development of bone marrow progenitor cells.

PubMed

Puverel, Sandrine; Kiris, Erkan; Singh, Satyendra; Klarmann, Kimberly D; Coppola, Vincenzo; Keller, Jonathan R; Tessarollo, Lino

2016-12-20

c-Kit is a tyrosine kinase receptor important for gametogenesis, hematopoiesis, melanogenesis and mast cell biology. Dysregulation of c-Kit function is oncogenic and its expression in the stem cell niche of a number of tissues has underlined its relevance for regenerative medicine and hematopoietic stem cell biology. Yet, very little is known about the mechanisms that control c-Kit protein levels. Here we show that the RanBPM/RanBP9 scaffold protein binds to c-Kit and is necessary for normal c-Kit protein expression in the mouse testis and subset lineages of the hematopoietic system. RanBPM deletion causes a reduction in c-Kit protein but not its mRNA suggesting a posttranslational mechanism. This regulation is specific to the c-Kit receptor since RanBPM reduction does not affect other membrane proteins examined. Importantly, in both mouse hematopoietic system and testis, RanBPM deficiency causes defects consistent with c-Kit loss of expression suggesting that RanBPM is an important regulator of c-Kit function. The finding that this regulatory mechanism is also present in human cells expressing endogenous RanBPM and c-Kit suggests a potential new strategy to target oncogenic c-Kit in malignancies.

Kinesin-1 and mitochondrial motility control by discrimination of structurally equivalent but distinct subdomains in Ran-GTP-binding domains of Ran-binding protein 2.

PubMed

Patil, Hemangi; Cho, Kyoung-in; Lee, James; Yang, Yi; Orry, Andrew; Ferreira, Paulo A

2013-03-27

The pleckstrin homology (PH) domain is a versatile fold that mediates a variety of protein-protein and protein-phosphatidylinositol lipid interactions. The Ran-binding protein 2 (RanBP2) contains four interspersed Ran GTPase-binding domains (RBD(n = 1-4)) with close structural homology to the PH domain of Bruton's tyrosine kinase. The RBD2, kinesin-binding domain (KBD) and RBD3 comprise a tripartite domain (R2KR3) of RanBP2 that causes the unfolding, microtubule binding and biphasic activation of kinesin-1, a crucial anterograde motor of mitochondrial motility. However, the interplay between Ran GTPase and R2KR3 of RanBP2 in kinesin-1 activation and mitochondrial motility is elusive. We use structure-function, biochemical, kinetic and cell-based assays with time-lapse live-cell microscopy of over 260,000 mitochondrial-motility-related events to find mutually exclusive subdomains in RBD2 and RBD3 towards Ran GTPase binding, kinesin-1 activation and mitochondrial motility regulation. The RBD2 and RBD3 exhibit Ran-GTP-independent, subdomain and stereochemical-dependent discrimination on the biphasic kinetics of kinesin-1 activation or regulation of mitochondrial motility. Further, KBD alone and R2KR3 stimulate and suppress, respectively, multiple biophysical parameters of mitochondrial motility. The regulation of the bidirectional transport of mitochondria by either KBD or R2KR3 is highly coordinated, because their kinetic effects are accompanied always by changes in mitochondrial motile events of either transport polarity. These studies uncover novel roles in Ran GTPase-independent subdomains of RBD2 and RBD3, and KBD of RanBP2, that confer antagonizing and multi-modal mechanisms of kinesin-1 activation and regulation of mitochondrial motility. These findings open new venues towards the pharmacological harnessing of cooperative and competitive mechanisms regulating kinesins, RanBP2 or mitochondrial motility in disparate human disorders.

Spatial and temporal ecological variability in the northern Gulf of Alaska: What have we learned since the Exxon Valdez oil spill?

NASA Astrophysics Data System (ADS)

Aderhold, Donna G. R.; Lindeberg, Mandy R.; Holderied, Kris; Pegau, W. Scott

2018-01-01

This special issue examines oceanographic and biological variability in the northern Gulf of Alaska region with an emphasis on recent monitoring efforts of the Gulf Watch Alaska (GWA) and Herring Research and Monitoring (HRM) programs funded by the Exxon Valdez Oil Spill Trustee Council (EVOSTC). These programs are designed to improve our understanding of how changing environmental conditions affect Gulf of Alaska ecosystems and the long-term status of resources injured by the Exxon Valdez oil spill.

Reconstitution of the Recombinant RanBP2 SUMO E3 Ligase Complex.

PubMed

Ritterhoff, Tobias; Das, Hrishikesh; Hao, Yuqing; Sakin, Volkan; Flotho, Annette; Werner, Andreas; Melchior, Frauke

2016-01-01

One of the few proteins that have SUMO E3 ligase activity is the 358 kDa nucleoporin RanBP2 (Nup358). While small fragments of RanBP2 can stimulate SUMOylation in vitro, the physiologically relevant E3 ligase is a stable multi-subunit complex comprised of RanBP2, SUMOylated RanGAP1, and Ubc9. Here, we provide a detailed protocol to in vitro reconstitute the RanBP2 SUMO E3 ligase complex. With the exception of RanBP2, reconstitution involves untagged full-length proteins. We describe the bacterial expression and purification of all complex components, namely an 86 kDa His-tagged RanBP2 fragment, the SUMO E2-conjugating enzyme Ubc9, RanGAP1, and SUMO1, and we provide a protocol for quantitative SUMOylation of RanGAP1. Finally, we present details for the assembly and final purification of the catalytically active RanBP2/RanGAP1*SUMO1/Ubc9 complex.

RanBP9 at the intersection between cofilin and Aβ pathologies: rescue of neurodegenerative changes by RanBP9 reduction.

PubMed

Woo, J A; Boggess, T; Uhlar, C; Wang, X; Khan, H; Cappos, G; Joly-Amado, A; De Narvaez, E; Majid, S; Minamide, L S; Bamburg, J R; Morgan, D; Weeber, E; Kang, D E

2015-03-05

Molecular pathways underlying the neurotoxicity and production of amyloid β protein (Aβ) represent potentially promising therapeutic targets for Alzheimer's disease (AD). We recently found that overexpression of the scaffolding protein RanBP9 increases Aβ production in cell lines and in transgenic mice while promoting cofilin activation and mitochondrial dysfunction. Translocation of cofilin to mitochondria and induction of cofilin-actin pathology require the activation/dephosphorylation of cofilin by Slingshot homolog 1 (SSH1) and cysteine oxidation of cofilin. In this study, we found that endogenous RanBP9 positively regulates SSH1 levels and mediates Aβ-induced translocation of cofilin to mitochondria and induction of cofilin-actin pathology in cultured cells, primary neurons, and in vivo. Endogenous level of RanBP9 was also required for Aβ-induced collapse of growth cones in immature neurons (days in vitro 9 (DIV9)) and depletion of synaptic proteins in mature neurons (DIV21). In vivo, amyloid precursor protein (APP)/presenilin-1 (PS1) mice exhibited 3.5-fold increased RanBP9 levels, and RanBP9 reduction protected against cofilin-actin pathology, synaptic damage, gliosis, and Aβ accumulation associated with APP/PS1 mice. Brains slices derived from APP/PS1 mice showed significantly impaired long-term potentiation (LTP), and RanBP9 reduction significantly enhanced paired pulse facilitation and LTP, as well as partially rescued contextual memory deficits associated with APP/PS1 mice. Therefore, these results underscore the critical importance of endogenous RanBP9 not only in Aβ accumulation but also in mediating the neurotoxic actions of Aβ at the level of synaptic plasticity, mitochondria, and cofilin-actin pathology via control of the SSH1-cofilin pathway in vivo.

Ran-dependent nuclear export mediators: a structural perspective

PubMed Central

Güttler, Thomas; Görlich, Dirk

2011-01-01

Nuclear export is an essential eukaryotic activity. It proceeds through nuclear pore complexes (NPCs) and is mediated by soluble receptors that shuttle between nucleus and cytoplasm. RanGTPase-dependent export mediators (exportins) constitute the largest class of these carriers and are functionally highly versatile. All of these exportins load their substrates in response to RanGTP binding in the nucleus and traverse NPCs as ternary RanGTP–exportin–cargo complexes to the cytoplasm, where GTP hydrolysis leads to export complex disassembly. The different exportins vary greatly in their substrate range. Recent structural studies of both protein- and RNA-specific exporters have illuminated how exportins bind their cargoes, how Ran triggers cargo loading and how export complexes are disassembled in the cytoplasm. Here, we review the current state of knowledge and highlight emerging principles as well as prevailing questions. PMID:21878989

Mutations in Ran system affected telomere silencing in Saccharomyces cerevisiae

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hayashi, Naoyuki; Department of Molecular Oncology, Cancer Research Institute, Kanazawa University, Kanazawa, Ishikawa 920-0934; Kobayashi, Masahiko

The Ran GTPase system regulates the direction and timing of several cellular events, such as nuclear-cytosolic transport, centrosome formation, and nuclear envelope assembly in telophase. To gain insight into the Ran system's involvement in chromatin formation, we investigated gene silencing at the telomere in several mutants of the budding yeast Saccharomyces cerevisiae, which had defects in genes involved in the Ran system. A mutation of the RanGAP gene, rna1-1, caused reduced silencing at the telomere, and partial disruption of the nuclear Ran binding factor, yrb2-{delta}2, increased this silencing. The reduced telomere silencing in rna1-1 cells was suppressed by a highmore » dosage of the SIR3 gene or the SIT4 gene. Furthermore, hyperphosphorylated Sir3 protein accumulated in the rna1-1 mutant. These results suggest that RanGAP is required for the heterochromatin structure at the telomere in budding yeast.« less

Ran GTPase promotes cancer progression via Met receptor-mediated downstream signaling

PubMed Central

Yuen, Hiu-Fung; Chan, Ka-Kui; Platt-Higgins, Angela; Dakir, El-Habib; Matchett, Kyle B.; Haggag, Yusuf Ahmed; Jithesh, Puthen V.; Habib, Tanwir; Faheem, Ahmed; Dean, Fennell A.; Morgan, Richard; Rudland, Philip S.; El-Tanani, Mohamed

2016-01-01

It has been shown previously that cancer cells with an activated oncogenic pathway, including Met activation, require Ran for growth and survival. Here, we show that knockdown of Ran leads to a reduction of Met receptor expression in several breast and lung cancer cell lines. This, in turn suppressed HGF expression and the Met-mediated activation of the Akt pathway, as well as cell adhesion, migration, and invasion. In a cell line model where Met amplification has previously been shown to contribute to gefitinib resistance, Ran knockdown sensitized cells to gefitinib-mediated inhibition of Akt and ERK1/2 phosphorylation and consequently reduced cell proliferation. We further demonstrate that Met reduction-mediated by knockdown of Ran, occurs at the post-transcriptional level, probably via a matrix metalloproteinase. Moreover, the level of immunoreactive Ran and Met are positively associated in human breast cancer specimens, suggesting that a high level of Ran may be a pre-requisite for Met overexpression. Interestingly, a high level of immunoreactive Ran dictates the prognostic significance of Met, indicating that the co-overexpression of Met and Ran may be associated with cancer progression and could be used in combination as a prognostic indicator. PMID:27716616

RanBPM: a potential therapeutic target for modulating diverse physiological disorders.

PubMed

Das, Soumyadip; Suresh, Bharathi; Kim, Hyongbum Henry; Ramakrishna, Suresh

2017-12-01

The Ran-binding protein microtubule-organizing center (RanBPM) is a highly conserved nucleocytoplasmic protein involved in a variety of intracellular signaling pathways that control diverse cellular functions. RanBPM interacts with proteins that are linked to various diseases, including Alzheimer's disease (AD), schizophrenia (SCZ), and cancer. In this article, we define the characteristics of the scaffolding protein RanBPM and focus on its interaction partners in diverse physiological disorders, such as neurological diseases, fertility disorders, and cancer. Copyright © 2017 Elsevier Ltd. All rights reserved.

A transect of metamorphic rocks along the Copper River, Cordova and Valdez Quadrangles, Alaska: A section in The United States Geological Survey in Alaska: Accomplishments during 1982

USGS Publications Warehouse

Miller, Marti L.; Dumoulin, Julie A.; Nelson, S.W.

1984-01-01

The lower Tertiary Orca Group is juxtaposed against the Upper Cretaceous Valdez Group along the Contact fault system (Winkler and Plafker, 1974, 198; Plafker and others, 1977)(fig. 33). In both groups, turbidites are the dominant rock type, with lesser mafic volcanic rocks (table 10). The Valdez Group, on the north, has traditionally been considered to be of higher metamorphic grade than the Orca Group (Moffit, 1954; Tysdal and Case, 1979; Winkler and Plafker, 198; Winkler and others, 1981). In 1982, we made a transect across the regional strike of the rocks and the contact between the two groups. The transect area follows the Copper River for 85 km from the Cordova quadrangle north into the Valdez quadrangle and extends for about 25 km on either side of the river (fig. 33). We planned, by systematic sampling of the area, to examine the metamorphic differences between the Orca and Valdez Groups. We found, however, that a strong thermal metamorphic event has overprinted and obscured regional metamorphic relations. We believe intrusion of Tertiary granite (fig. 33) to be responsible for this metamorphism. (Figures 33 and 34 and tables follow this article.)

Geochemical changes in crude oil spilled from the Exxon Valdez supertanker into Prince William Sound, Alaska

USGS Publications Warehouse

Hostettler, Frances D.; Kvenvolden, Keith A.

1994-01-01

North Slope crude oil spilled from the T/V Exxon Valdez in March 1989 and contaminated about 500 km of Prince William Sound shoreline. Aliphatic and aromatic hydrocarbons in oil samples collected in August 1990 and June 1992 from beaches on six islands impacted by the spill have been compared with the hydrocarbons from North Slope crude oil taken from the stricken tanker. Degradation processes have changed the physical appearance of this residual spilled oil; the beached oil as collected ranged from a light brown color, to a heavy black viscous oil, to a black, powder-like residue. In these physically different samples, terpane, sterane, and aromatic sterane distributions, as well as carbon isotope values, are similar and correlate with the original Exxon Valdez oil. On the other hand, n-alkanes, isoprenoids, and many of the polycyclic aromatic hydrocarbons which are present in the original crude oil are dramatically altered in the oil samples collected from the beaches.

Overview of studies to determine injury caused by the Exxon Valdez Oil Spill to marine mammals

USGS Publications Warehouse

Loughlin, Thomas R.; Ballachey, Brenda E.; Wright, B.A.; Rice, S.D.; Spies, R.B.; Wolfe, D.A.; Wright, B.A.

1996-01-01

Marine mammal damage assessment studies after the Exxon Valdez oil spill concentrated on sea otters, harbor seals, Steller sea lions, killer whales, and humpback whales. Sea otter and harbor seals were the most affected marine mammal; it was estimated that several thousand otters and several hundred harbor seals died within months of the spill. Steller sea lion, harbor seal, and sea otter numbers were monitored using aerial surveys. Studies of humpback whales and killer whales used photoidentification techniques to determine changes in abundance, distribution, mortality, and natality. Tissues from animals found dead in spill and control areas were analyzed for hydrocarbon levels. Sea otters, sea lions and harbor seals had elevated hydrocarbon levels, but only sea otters and harbor seals showed population declines associated with the spill. Humpback whales were not severely affected by the Exxon Valdez oil spill. Killer whale numbers in the resident AB pod declined after the spill. Coincidental evidence supports the oil spill as the causative agent.

Hybrid RANS-LES using high order numerical methods

NASA Astrophysics Data System (ADS)

Henry de Frahan, Marc; Yellapantula, Shashank; Vijayakumar, Ganesh; Knaus, Robert; Sprague, Michael

2017-11-01

Understanding the impact of wind turbine wake dynamics on downstream turbines is particularly important for the design of efficient wind farms. Due to their tractable computational cost, hybrid RANS/LES models are an attractive framework for simulating separation flows such as the wake dynamics behind a wind turbine. High-order numerical methods can be computationally efficient and provide increased accuracy in simulating complex flows. In the context of LES, high-order numerical methods have shown some success in predictions of turbulent flows. However, the specifics of hybrid RANS-LES models, including the transition region between both modeling frameworks, pose unique challenges for high-order numerical methods. In this work, we study the effect of increasing the order of accuracy of the numerical scheme in simulations of canonical turbulent flows using RANS, LES, and hybrid RANS-LES models. We describe the interactions between filtering, model transition, and order of accuracy and their effect on turbulence quantities such as kinetic energy spectra, boundary layer evolution, and dissipation rate. This work was funded by the U.S. Department of Energy, Exascale Computing Project, under Contract No. DE-AC36-08-GO28308 with the National Renewable Energy Laboratory.

Quantitative Assessment of Current Risks to Harlequin Ducks in Prince William Sound, Alaska, from the Exxon Valdez Oil Spill

PubMed Central

Harwell, Mark A.; Gentile, John H.; Parker, Keith R.; Murphy, Stephen M.; Day, Robert H.; Bence, A. Edward; Neff, Jerry M.; Wiens, John A.

2012-01-01

Harlequin Ducks (Histrionicus histrionicus) were adversely affected by the Exxon Valdez oil spill (EVOS) in Prince William Sound (PWS), Alaska, and some have suggested effects continue two decades later. We present an ecological risk assessment evaluating quantitatively whether PWS seaducks continue to be at-risk from polycyclic aromatic hydrocarbons (PAHs) in residual Exxon Valdez oil. Potential pathways for PAH exposures are identified for initially oiled and never-oiled reference sites. Some potential pathways are implausible (e.g., a seaduck excavating subsurface oil residues), whereas other pathways warrant quantification. We used data on PAH concentrations in PWS prey species, sediments, and seawater collected during 2001–2008 to develop a stochastic individual-based model projecting assimilated doses to seaducks. We simulated exposures to 500,000 individuals in each of eight age/gender classes, capturing the variability within a population of seaducks living in PWS. Doses to the maximum-exposed individuals are ∼400–4,000 times lower than chronic toxicity reference values established using USEPA protocols for seaducks. These exposures are so low that no individual-level effects are plausible, even within a simulated population that is orders-of-magnitude larger than exists in PWS. We conclude that toxicological risks to PWS seaducks from residual Exxon Valdez oil two decades later are essentially non-existent. PMID:23723680

Harlequin duck population recovery following the 'Exxon Valdez' oil spill: Progress, process and constraints

USGS Publications Warehouse

Esler, Daniel N.; Bowman, Timothy D.; Trust, Kimberly A.; Ballachey, Brenda E.; Dean, Thomas A.; Jewett, Stephen C.; O'Clair, Charles E.

2002-01-01

Following the 1989 'Exxon Valdez' oil spill in Prince William Sound, Alaska, we studied the status of recovery of harlequin duck Histrionicus histrionicus populations during 1995 to 1998. We evaluated potential constraints on full recovery, including (1) exposure to residual oil; (2) food limitation; and (3) intrinsic demographic limitations on population growth rates. In this paper, we synthesize the findings from our work and incorporate information from other harlequin duck research and monitoring programs to provide a comprehensive evaluation of the response of this species to the 'Exxon Valdez' spill. We conclude that harlequin duck populations had not fully recovered by 1998. Furthermore, adverse effects continued as many as 9 yr after the oil spill, in contrast to the conventional paradigm that oil spill effects on bird populations are short-lived. These conclusions are based on the findings that (1) elevated cytochrome P450 (CYP1A) induction on oiled areas indicated continued exposure to oil in 1998; (2) adult female winter survival was lower on oiled than unoiled areas during 1995 to 1998; (3) fall population surveys by the Alaska Department of Fish and Game indicated numerical declines in oiled areas during 1995 to 1997; and (4) densities on oiled areas in 1996 and 1997 were lower than expected using models that accounted for effects of habitat attributes. Based on hypothesized links between oil contamination and demography, we suggest that harlequin duck population recovery was constrained primarily by continued oil exposure. Full population recovery will also be delayed by the time necessary for intrinsic population growth to allow return to pre-spill numbers following cessation of residual oil spill effects. Although not all wildlife species were affected by the 'Exxon Valdez' oil spill, and some others may have recovered quickly from any effects, harlequin duck life history characteristics and benthic, nearshore feeding habits make them susceptible to

RAN1 is involved in plant cold resistance and development in rice (Oryza sativa).

PubMed

Xu, Peipei; Cai, Weiming

2014-07-01

Of the diverse abiotic stresses, low temperature is one of the major limiting factors that lead to a series of morphological, physiological, biochemical, and molecular changes in plants. Ran, an evolutionarily conserved small G-protein family, has been shown to be essential for the nuclear translocation of proteins. It also mediates the regulation of cell cycle progression in mammalian cells. However, little is known about Ran function in rice (Oryza sativa). We report here that Ran gene OsRAN1 is essential for the molecular improvement of rice for cold tolerance. Ran also affects plant morphogenesis in transgenic Arabidopsis thaliana. OsRAN1 is ubiquitously expressed in rice tissues with the highest expression in the spike. The levels of mRNA encoding OsRAN1 were greatly increased by cold and indoleacetic acid treatment rather than by addition of salt and polyethylene glycol. Further, OsRAN1 overexpression in Arabidopsis increased tiller number, and altered root development. OsRAN1 overexpression in rice improves cold tolerance. The levels of cellular free Pro and sugar levels were highly increased in transgenic plants under cold stress. Under cold stress, OsRAN1 maintained cell division and cell cycle progression, and also promoted the formation of an intact nuclear envelope. The results suggest that OsRAN1 protein plays an important role in the regulation of cellular mitosis and the auxin signalling pathway. © The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Scaffolding protein RanBPM and its interactions in diverse signaling pathways in health and disease.

PubMed

Das, Soumyadip; Haq, Saba; Ramakrishna, Suresh

2018-04-01

Ran-binding protein in the microtubule-organizing center (RanBPM) is an evolutionarily conserved, nucleocytoplasmic scaffolding protein involved in various cellular processes and several signal transduction pathways. RanBPM has a crucial role in mediating disease pathology by interacting with diverse proteins to regulate their functions. Previously, we compiled diverse cellular functions of RanBPM. Since then the functions of RanBPM have increased exponentially. In this article, we have updated the functions of RanBPM through its manifold interactions that have been investigated to date, according to their roles in protein stability, transcriptional activity, cellular development, neurobiology, and the cell cycle. Our review provides a complete guide on RanBPM interactors, the physiological role of RanBPM in cellular functions, and potential applications in disease therapeutics.

Knockdown of Ran GTPase expression inhibits the proliferation and migration of breast cancer cells.

PubMed

Sheng, Chenyi; Qiu, Jian; Wang, Yingying; He, Zhixian; Wang, Hua; Wang, Qingqing; Huang, Yeqing; Zhu, Lianxin; Shi, Feng; Chen, Yingying; Xiong, Shiyao; Xu, Zhen; Ni, Qichao

2018-05-03

Breast cancer is the second leading cause of cancer‑associated mortality in women worldwide. Strong evidence has suggested that Ran, which is a small GTP binding protein involved in the transport of RNA and protein across the nucleus, may be a key cellular protein involved in the metastatic progression of cancer. The present study investigated Ran gene expression in breast cancer tissue samples obtained from 140 patients who had undergone surgical resection for breast cancer. Western blot analysis of Ran in breast cancer tissues and paired adjacent normal tissues showed that expression of Ran was significantly increased in breast cancer tissues. Immunohistochemistry analyses conducted on formalin‑fixed paraffin‑embedded breast cancer tissue sections revealed that Ran expression was associated with tumor histological grade, nerve invasion and metastasis, vascular metastasis and Ki‑67 expression (a marker of cell proliferation). Kaplan‑Meier survival analysis showed that increased Ran expression in patients with breast cancer was positively associated with a poor survival prognosis. Furthermore, in vitro experiments demonstrated that highly migratory MDA‑MB‑231 cancer cells treated with Ran‑si‑RNA (si‑Ran), which knocked down expression of Ran, exhibited decreased motility in trans‑well migration and wound healing assays. Cell cycle analysis of Ran knocked down MDA‑MB‑231 cells implicated Ran in cell cycle arrest and the inhibition of proliferation. Furthermore, a starvation and re‑feeding (CCK‑8) assay was performed, which indicated that Ran regulated breast cancer cell proliferation. Taken together, the results provide strong in vitro evidence of the involvement of Ran in the progression of breast cancer and suggest that it could have high potential as a therapeutic target and/or marker of disease.

Conditions of persistent oil on beaches in Prince William Sound 26 years after the Exxon Valdez spill

NASA Astrophysics Data System (ADS)

Lindeberg, Mandy R.; Maselko, Jacek; Heintz, Ron A.; Fugate, Corey J.; Holland, Larry

2018-01-01

On March 24, 1989, the Exxon Valdez grounded on Bligh Reef in Prince William Sound, Alaska, spilling an estimated 10.8 million gallons of crude oil. Contrary to early projections, subsequent studies over several decades have shown subsurface oil persisting on impacted beaches. Here we present findings from a lingering oil survey conducted during the summer of 2015 at a small set of beaches in Prince William Sound known to have persistent subsurface Exxon Valdez oil. The objectives of the survey were to estimate how much oil remains at these sites, the oil composition, and oil retention rates compared to previous studies. Results from the survey found lingering oil was present at 8 of 9 sites that were revisited. Surveys revealed little evidence of change in oil area or mass over the last 14 years, nor has there been a change in the distribution of oiling intensities or their location on the beach. Detailed analysis of the oil indicated it has not weathered since 2001. Subsurface oils collected in 2015 have enriched concentrations of phenanthrenes and chrysenes relative to oil originating in the cargo hold indicating that buried oil has retained some toxic potential over the last two decades, but it is not currently bioavailable. Subsurface oil appears to be sequestered in sediments and protected from hydrological washing and low oxygen and nutrient levels inhibiting biodegradation. These findings are consistent with previous surveys and predictive geomorphic models suggesting the estimated 0.6% Exxon Valdez oil remaining is sequestered and not bioavailable unless disturbed and will likely persist in the environment on a decadal scale.

Structural basis for nuclear import complex dissociation by RanGTP.

PubMed

Lee, Soo Jae; Matsuura, Yoshiyuki; Liu, Sai Man; Stewart, Murray

2005-06-02

Nuclear protein import is mediated mainly by the transport factor importin-beta that binds cytoplasmic cargo, most often via the importin-alpha adaptor, and then transports it through nuclear pore complexes. This active transport is driven by disassembly of the import complex by nuclear RanGTP. The switch I and II loops of Ran change conformation with nucleotide state, and regulate its interactions with nuclear trafficking components. Importin-beta consists of 19 HEAT repeats that are based on a pair of antiparallel alpha-helices (referred to as the A- and B-helices). The HEAT repeats stack to yield two C-shaped arches, linked together to form a helicoidal molecule that has considerable conformational flexibility. Here we present the structure of full-length yeast importin-beta (Kap95p or karyopherin-beta) complexed with RanGTP, which provides a basis for understanding the crucial cargo-release step of nuclear import. We identify a key interaction site where the RanGTP switch I loop binds to the carboxy-terminal arch of Kap95p. This interaction produces a change in helicoidal pitch that locks Kap95p in a conformation that cannot bind importin-alpha or cargo. We suggest an allosteric mechanism for nuclear import complex disassembly by RanGTP.

How Is RAN Related to Reading Fluency? A Comprehensive Examination of the Prominent Theoretical Accounts

PubMed Central

Papadopoulos, Timothy C.; Spanoudis, George C.; Georgiou, George K.

2016-01-01

We examined the prominent theoretical explanations of the RAN-reading relationship in a relatively transparent language (Greek) in a sample of children (n = 286) followed from Grade 1 to Grade 2. Specifically, we tested the fit of eight different models, as defined by the type of reading performance predicted (oral vs. silent word reading fluency), the type of RAN tasks (non-alphanumeric vs. alphanumeric), and the RAN effects (direct vs. indirect). Working memory, attention, processing speed, and motor skills were used as “common cause” variables predicting both RAN and reading fluency and phonological awareness and orthographic processing were used as mediators of RAN's effects on reading fluency. The findings of both concurrent and longitudinal analyses indicated that RAN is a unique predictor of oral reading fluency, but not silent reading fluency. Using alphanumeric or non-alphanumeric RAN did not particularly affect the RAN-reading relationship. Both phonological awareness and orthographic processing partly mediated RAN's effects on reading fluency. Theoretical implications of these findings are discussed. PMID:27605918

The RanGTP Pathway: From Nucleo-Cytoplasmic Transport to Spindle Assembly and Beyond

PubMed Central

Cavazza, Tommaso; Vernos, Isabelle

2016-01-01

The small GTPase Ran regulates the interaction of transport receptors with a number of cellular cargo proteins. The high affinity binding of the GTP-bound form of Ran to import receptors promotes cargo release, whereas its binding to export receptors stabilizes their interaction with the cargo. This basic mechanism linked to the asymmetric distribution of the two nucleotide-bound forms of Ran between the nucleus and the cytoplasm generates a switch like mechanism controlling nucleo-cytoplasmic transport. Since 1999, we have known that after nuclear envelope breakdown (NEBD) Ran and the above transport receptors also provide a local control over the activity of factors driving spindle assembly and regulating other aspects of cell division. The identification and functional characterization of RanGTP mitotic targets is providing novel insights into mechanisms essential for cell division. Here we review our current knowledge on the RanGTP system and its regulation and we focus on the recent advances made through the characterization of its mitotic targets. We then briefly review the novel functions of the pathway that were recently described. Altogether, the RanGTP system has moonlighting functions exerting a spatial control over protein interactions that drive specific functions depending on the cellular context. PMID:26793706

Anomalous Representations of Reality in Luis Valdez's "The Shrunken Head of Pancho Villa" and "The Mummified Deer"

ERIC Educational Resources Information Center

Saborio, Linda

2008-01-01

Luis Valdez creates anomalous realities in two of his plays, "The Shrunken Head of Pancho Villa" and "The Mummified Deer," in order to defy dominant expressions of reality as well as classifications of "Chicano" and "Mexican." The anomalous realities, represented primarily by a bodiless head in the first play and an eighty-four-year-old Yaqui…

Crystal structure of importin-α3 bound to the nuclear localization signal of Ran-binding protein 3.

PubMed

Koyama, Masako; Matsuura, Yoshiyuki

2017-09-23

Ran-binding protein 3 (RanBP3) is a primarily nuclear Ran-binding protein that functions as an accessory factor in the Ran GTPase system. RanBP3 associates with Ran-specific nucleotide exchange factor RCC1 and enhances its catalytic activity towards Ran. RanBP3 also promotes CRM1-mediated nuclear export as well as CRM1-independent nuclear export of β-catenin, Smad2, and Smad3. Nuclear import of RanBP3 is dependent on the nuclear import adaptor protein importin-α and, RanBP3 is imported more efficiently by importin-α3 than by other members of the importin-α family. Protein kinase signaling pathways control nucleocytoplasmic transport through phosphorylation of RanBP3 at Ser58, immediately C-terminal to the nuclear localization signal (NLS) in the N-terminal region of RanBP3. Here we report the crystal structure of human importin-α3 bound to an N-terminal fragment of human RanBP3 containing the NLS sequence that is necessary and sufficient for nuclear import. The structure reveals that RanBP3 binds to importin-α3 residues that are strictly conserved in all seven isoforms of human importin-α at the major NLS-binding site, indicating that the region of importin-α outside the NLS-binding site, possibly the autoinhibotory importin-β1-binding domain, may be the key determinant for the preferential binding of RanBP3 to importin-α3. Computational docking simulation indicates that phosphorylation of RanBP3 at Ser58 could potentially stabilize the association of RanBP3 with importin-α through interactions between the phosphate moiety of phospho-Ser58 of RanBP3 and a cluster of basic residues (Arg96 and Lys97 in importin-α3) on armadillo repeat 1 of importin-α. Copyright © 2017 Elsevier Inc. All rights reserved.

A Hybrid RANS/LES Approach for Predicting Jet Noise

NASA Technical Reports Server (NTRS)

Goldstein, Marvin E.

2006-01-01

Hybrid acoustic prediction methods have an important advantage over the current Reynolds averaged Navier-Stokes (RANS) based methods in that they only involve modeling of the relatively universal subscale motion and not the configuration dependent larger scale turbulence. Unfortunately, they are unable to account for the high frequency sound generated by the turbulence in the initial mixing layers. This paper introduces an alternative approach that directly calculates the sound from a hybrid RANS/LES flow model (which can resolve the steep gradients in the initial mixing layers near the nozzle lip) and adopts modeling techniques similar to those used in current RANS based noise prediction methods to determine the unknown sources in the equations for the remaining unresolved components of the sound field. The resulting prediction method would then be intermediate between the current noise prediction codes and previously proposed hybrid noise prediction methods.

Ran-dependent TPX2 activation promotes acentrosomal microtubule nucleation in neurons

PubMed Central

Chen, Wen-Shin; Chen, Yi-Ju; Huang, Yung-An; Hsieh, Bing-Yuan; Chiu, Ho-Chieh; Kao, Pei-Ying; Chao, Chih-Yuan; Hwang, Eric

2017-01-01

The microtubule (MT) cytoskeleton is essential for the formation of morphologically appropriate neurons. The existence of the acentrosomal MT organizing center in neurons has been proposed but its identity remained elusive. Here we provide evidence showing that TPX2 is an important component of this acentrosomal MT organizing center. First, neurite elongation is compromised in TPX2-depleted neurons. In addition, TPX2 localizes to the centrosome and along the neurite shaft bound to MTs. Depleting TPX2 decreases MT formation frequency specifically at the tip and the base of the neurite, and these correlate precisely with the regions where active GTP-bound Ran proteins are enriched. Furthermore, overexpressing the downstream effector of Ran, importin, compromises MT formation and neuronal morphogenesis. Finally, applying a Ran-importin signaling interfering compound phenocopies the effect of TPX2 depletion on MT dynamics. Together, these data suggest a model in which Ran-dependent TPX2 activation promotes acentrosomal MT nucleation in neurons. PMID:28205572

Data-driven RANS for simulations of large wind farms

NASA Astrophysics Data System (ADS)

Iungo, G. V.; Viola, F.; Ciri, U.; Rotea, M. A.; Leonardi, S.

2015-06-01

In the wind energy industry there is a growing need for real-time predictions of wind turbine wake flows in order to optimize power plant control and inhibit detrimental wake interactions. To this aim, a data-driven RANS approach is proposed in order to achieve very low computational costs and adequate accuracy through the data assimilation procedure. The RANS simulations are implemented with a classical Boussinesq hypothesis and a mixing length turbulence closure model, which is calibrated through the available data. High-fidelity LES simulations of a utility-scale wind turbine operating with different tip speed ratios are used as database. It is shown that the mixing length model for the RANS simulations can be calibrated accurately through the Reynolds stress of the axial and radial velocity components, and the gradient of the axial velocity in the radial direction. It is found that the mixing length is roughly invariant in the very near wake, then it increases linearly with the downstream distance in the diffusive region. The variation rate of the mixing length in the downstream direction is proposed as a criterion to detect the transition between near wake and transition region of a wind turbine wake. Finally, RANS simulations were performed with the calibrated mixing length model, and a good agreement with the LES simulations is observed.

Hybrid LES RANS technique based on a one-equation near-wall model

NASA Astrophysics Data System (ADS)

Breuer, M.; Jaffrézic, B.; Arora, K.

2008-05-01

In order to reduce the high computational effort of wall-resolved large-eddy simulations (LES), the present paper suggests a hybrid LES RANS approach which splits up the simulation into a near-wall RANS part and an outer LES part. Generally, RANS is adequate for attached boundary layers requiring reasonable CPU-time and memory, where LES can also be applied but demands extremely large resources. Contrarily, RANS often fails in flows with massive separation or large-scale vortical structures. Here, LES is without a doubt the best choice. The basic concept of hybrid methods is to combine the advantages of both approaches yielding a prediction method, which, on the one hand, assures reliable results for complex turbulent flows, including large-scale flow phenomena and massive separation, but, on the other hand, consumes much fewer resources than LES, especially for high Reynolds number flows encountered in technical applications. In the present study, a non-zonal hybrid technique is considered (according to the signification retained by the authors concerning the terms zonal and non-zonal), which leads to an approach where the suitable simulation technique is chosen more or less automatically. For this purpose the hybrid approach proposed relies on a unique modeling concept. In the LES mode a subgrid-scale model based on a one-equation model for the subgrid-scale turbulent kinetic energy is applied, where the length scale is defined by the filter width. For the viscosity-affected near-wall RANS mode the one-equation model proposed by Rodi et al. (J Fluids Eng 115:196 205, 1993) is used, which is based on the wall-normal velocity fluctuations as the velocity scale and algebraic relations for the length scales. Although the idea of combined LES RANS methods is not new, a variety of open questions still has to be answered. This includes, in particular, the demand for appropriate coupling techniques between LES and RANS, adaptive control mechanisms, and proper subgrid

Social Disruption and Psychological Stress in an Alaskan Fishing Community: The Impact of the Exxon Valdez Oil Spill.

ERIC Educational Resources Information Center

Picou, J. Steven; And Others

Technological accidents such as the Exxon Valdez oil spill in 1989 create man-made disaster situations that threaten community survival and the well-being and quality of life of community residents. This paper focuses on the social and psychological impact of the 1989 oil spill on Cordova, an isolated Alaskan community with high economic…

Status of selected bottomfish and crustacean species in Prince William Sound following the Exxon Valdez oil spill

DOE Office of Scientific and Technical Information (OSTI.GOV)

Armstrong, D.A.; Dinnel, P.A.; Orensanz, J.M.

1995-12-31

Exposure and possible adverse effects of the Exxon Valdez oil spill (EVOS) at depth were studied between 1989 and 1991 on several species of crustaceans, molluscs, and finfish that are characterized by ontogenetic shifts in distribution from meroplanktonic larvae to benthic and demersal juveniles and adults. The authors approach was to search for (1) evidence of exposure to Exxon Valdez crude oil (EVC) at depth (generally between 20 to 150 m) and (2) measurable perturbations at both the individual and population levels. Primary species targeted were Tanner crab (Chionoecetes bairdi), several pandalid shrimps (Pandalus platyceros, P. hypsinotus, P. borealis), flatheadmore » sole (Hippoglossoides elassodon), and several bivalves including scallops (Chlamys rubida) and infaunal clams (Nuculana, Yoldia, and Macoma spp.). The survey design provided a comparison between variables measured in oiled bays around Knight Island and non-oiled bays at other locations within Prince William Sound. Polycyclic aromatic hydrocarbons (PAHs) of petrogenic origin were measured in all bays sampled in this study and levels of PAHs derived from EVC were elevated in the oiled bays following the spill, yet attenuated to less than 200 ng/g sediment by 1991. 95 refs., 22 figs., 6 tabs.« less

Ran1 functions to control the Cdc10/Sct1 complex through Puc1.

PubMed Central

Caligiuri, M; Connolly, T; Beach, D

1997-01-01

We have undertaken a biochemical analysis of the regulation of the G1/S-phase transition and commitment to the cell cycle in the fission yeast Schizosaccharomyces pombe. The execution of Start requires the activity of the Cdc2 protein kinase and the Sct1/Cdc10 transcription complex. Progression through G1 also requires the Ran1 protein kinase whose inactivation leads to activation of the meiotic pathway under conditions normally inhibitory to this process. We have found that in addition to Cdc2, Sct1/Cdc10 complex formation requires Ran1. We demonstrate that the Puc1 cyclin associates with Ran1 and Cdc10 in vivo and that the Ran1 protein kinase functions to control the association between Puc1 and Cdc10. In addition, we present evidence that the phosphorylation state of Cdc10 is altered upon inactivation of Ran1. These results provide biochemical evidence that demonstrate one mechanism by which the Ran1 protein kinase serves to control cell fate through Cdc10 and Puc1. Images PMID:9201720

A domain unique to plant RanGAP is responsible for its targeting to the plant nuclear rim

PubMed Central

Rose, Annkatrin; Meier, Iris

2001-01-01

Ran is a small signaling GTPase that is involved in nucleocytoplasmic transport. Two additional functions of animal Ran in the formation of spindle asters and the reassembly of the nuclear envelope in mitotic cells have been recently reported. In contrast to Ras or Rho, Ran is not associated with membranes. Instead, the spatial sequestering of its accessory proteins, the Ran GTPase-activating protein RanGAP and the nucleotide exchange factor RCC1, appears to define the local concentration of RanGTP vs. RanGDP involved in signaling. Mammalian RanGAP is bound to the nuclear pore by a mechanism involving the attachment of small ubiquitin-related modifier protein (SUMO) to its C terminus and the subsequent binding of the SUMOylated domain to the nucleoporin Nup358. Here we show that plant RanGAP utilizes a different mechanism for nuclear envelope association, involving a novel targeting domain that appears to be unique to plants. The N-terminal WPP domain is highly conserved among plant RanGAPs and the small, plant-specific nuclear envelope-associated protein MAF1, but not present in yeast or animal RanGAP. Confocal laser scanning microscopy of green fluorescent protein (GFP) fusion proteins showed that it is necessary for RanGAP targeting and sufficient to target the heterologous protein GFP to the plant nuclear rim. The highly conserved tryptophan and proline residues of the WPP motif are necessary for its function. The 110-aa WPP domain is the first nuclear-envelope targeting domain identified in plants. Its fundamental difference to its mammalian counterpart implies that different mechanisms have evolved in plants and animals to anchor RanGAP at the nuclear surface. PMID:11752475

Cytochrome P4501A biomarker indication of the timeline of chronic exposure of Barrow's goldeneyes to residual Exxon Valdez oil.

PubMed

Esler, Daniel; Ballachey, Brenda E; Trust, Kimberly A; Iverson, Samuel A; Reed, John A; Miles, A Keith; Henderson, John D; Woodin, Bruce R; Stegeman, John J; McAdie, Malcolm; Mulcahy, Daniel M; Wilson, Barry W

2011-03-01

We examined hepatic EROD activity, as an indicator of CYP1A induction, in Barrow's goldeneyes captured in areas oiled during the 1989 Exxon Valdez spill and those from nearby unoiled areas. We found that average EROD activity differed between areas during 2005, although the magnitude of the difference was reduced relative to a previous study from 1996/1997, and we found that areas did not differ by 2009. Similarly, we found that the proportion of individuals captured from oiled areas with elevated EROD activity (≥ 2 times unoiled average) declined from 41% in winter 1996/1997 to 10% in 2005 and 15% in 2009. This work adds to a body of literature describing the timelines over which vertebrates were exposed to residual Exxon Valdez oil and indicates that, for Barrow's goldeneyes in Prince William Sound, exposure persisted for many years with evidence of substantially reduced exposure by 2 decades after the spill. Copyright © 2010 Elsevier Ltd. All rights reserved.

RanGAP1 is a continuous marker of the Arabidopsis cell division plane

PubMed Central

Xu, Xianfeng Morgan; Zhao, Qiao; Rodrigo-Peiris, Thushani; Brkljacic, Jelena; He, Chao Sylvia; Müller, Sabine; Meier, Iris

2008-01-01

In higher plants, the plane of cell division is faithfully predicted by the preprophase band (PPB). The PPB, a cortical ring of microtubules and F-actin, disassembles upon nuclear-envelope breakdown. During cytokinesis, the expanding cell plate fuses with the plasma membrane at the cortical division site, the site of the former PPB. The nature of the “molecular memory” that is left behind by the PPB and is proposed to guide the cell plate to the cortical division site is unknown. RanGAP is the GTPase activating protein of the small GTPase Ran, which provides spatial information for nucleocytoplasmic transport and various mitotic processes in animals. Here, we show that, in dividing root cells, Arabidopsis RanGAP1 concentrates at the PPB and remains associated with the cortical division site during mitosis and cytokinesis, requiring its N-terminal targeting domain. In a fass/ton2 mutant, which affects PPB formation, RanGAP1 recruitment to the PPB site is lost, while its PPB retention is microtubule-independent. RanGAP1 persistence at the cortical division site, but not its initial accumulation at the PPB requires the 2 cytokinesis-regulating kinesins POK1 and POK2. Depletion of RanGAP by inducible RNAi leads to oblique cell walls and cell-wall stubs in root cell files, consistent with cytokinesis defects. We propose that Arabidopsis RanGAP, a continuous positive protein marker of the plant division plane, has a role in spatial signaling during plant cell division. PMID:19011093

Evaluation of sea otter capture after the Exxon Valdez oil spill, Prince William Sound, Alaska

USGS Publications Warehouse

Bodkin, James L.; Weltz, F.; Bayha, Keith; Kormendy, Jennifer

1990-01-01

After the T/V Exxon Valdez oil spill into Prince William Sound, the U.S. Fish and Wildlife Service and Exxon Company, U.S.A., began rescuing sea otters (Enhydra lutris). The primary objective of this operation was to capture live, oiled sea otters for cleaning and rehabilitation. Between 30 March and 29 May 1989, 139 live sea otters were captured in the sound and transported to rehabilitation centers in Valdez, Alaska. Within the first 15 days of capture operations, 122 (88%) otters were captured. Most sea otters were captured near Knight, Green, and Evans islands in the western sound. The primary capture method consisted of dipnetting otters out of water and off beaches. While capture rates declined over time, survival of captured otters increased as the interval from spill date to capture date increased. The relative degree of oiling observed for each otter captured declined over time. Declining capture rates led to the use of tangle nets. The evidence suggests the greatest threat to sea otters in Prince William Sound occurred within the first 3 weeks after the spill. Thus, in the future, the authors believe rescue efforts should begin as soon as possible after an oil spill in sea otter habitat. Further, preemptive capture and relocation of sea otters in Prince William Sound may have increased the number of otters that could have survived this event.

Different RAN Components Relate to Reading at Different Points in Time

ERIC Educational Resources Information Center

Georgiou, George K.; Papadopoulos, Timothy C.; Kaizer, Eleni L.

2014-01-01

The present 10-year longitudinal study examined how rapid automatized naming (RAN) components--articulation time and pause time--relate to reading fluency. Seventy-five Greek-speaking children were followed from Grade 1 to Grade 10 and were assessed five times (in Grades 1, 2, 4, 6, and 10) on RAN (digits and objects) and reading fluency (word…

Determination of Scaled Wind Turbine Rotor Characteristics from Three Dimensional RANS Calculations

NASA Astrophysics Data System (ADS)

Burmester, S.; Gueydon, S.; Make, M.

2016-09-01

Previous studies have shown the importance of 3D effects when calculating the performance characteristics of a scaled down turbine rotor [1-4]. In this paper the results of 3D RANS (Reynolds-Averaged Navier-Stokes) computations by Make and Vaz [1] are taken to calculate 2D lift and drag coefficients. These coefficients are assigned to FAST (Blade Element Momentum Theory (BEMT) tool from NREL) as input parameters. Then, the rotor characteristics (power and thrust coefficients) are calculated using BEMT. This coupling of RANS and BEMT was previously applied by other parties and is termed here the RANS-BEMT coupled approach. Here the approach is compared to measurements carried out in a wave basin at MARIN applying Froude scaled wind, and the direct 3D RANS computation. The data of both a model and full scale wind turbine are used for the validation and verification. The flow around a turbine blade at full scale has a more 2D character than the flow properties around a turbine blade at model scale (Make and Vaz [1]). Since BEMT assumes 2D flow behaviour, the results of the RANS-BEMT coupled approach agree better with the results of the CFD (Computational Fluid Dynamics) simulation at full- than at model-scale.

Cessation of oil exposure in harlequin ducks after the Exxon Valdez oil spill: Cytochrome P4501A biomarker evidence

USGS Publications Warehouse

Esler, Daniel N.; Ballachey, Brenda E.; Bowen, Lizabeth; Miles, A. Keith; Dickson, Rian D.; Henderson, John D.

2017-01-01

The authors quantified hepatic hydrocarbon-inducible cytochrome P4501A (CYP1A) expression, as ethoxyresorufin-O-deethylase (EROD) activity, in wintering harlequin ducks (Histrionicus histrionicus) captured in Prince William Sound, Alaska (USA), during 2011, 2013, and 2014 (22–25 yr following the 1989 Exxon Valdez oil spill). Average EROD activity was compared between birds from areas oiled by the spill and those from nearby unoiled areas. The present study replicated studies conducted from 1998 to 2009 demonstrating that harlequin ducks using areas oiled in 1989 had elevated EROD activity, indicative of oil exposure, up to 2 decades post spill. In the present study, it was found that average EROD activity during March 2011 was significantly higher in wintering harlequin ducks captured in oiled areas relative to unoiled areas, which the authors interpret to indicate that harlequin ducks continued to be exposed to residual Exxon Valdez oil up to 22 yr after the original spill. However, the 2011 results also indicated reductions in exposure relative to previous years. Average EROD activity in birds from oiled areas was approximately 2 times that in birds from unoiled areas in 2011, compared with observations from 2005 to 2009, in which EROD activity was 3 to 5 times higher in oiled areas. It was also found that average EROD activity during March 2013 and March 2014 was not elevated in wintering harlequin ducks from oiled areas. The authors interpret these findings to indicate that exposure of harlequin ducks to residual Exxon Valdez oil abated within 24 yr after the original spill. The present study finalizes a timeline of exposure, extending over 2 decades, for a bird species thought to be particularly vulnerable to oil contamination in marine environments

Inadequacy representation of flamelet-based RANS model for turbulent non-premixed flame

NASA Astrophysics Data System (ADS)

Lee, Myoungkyu; Oliver, Todd; Moser, Robert

2017-11-01

Stochastic representations for model inadequacy in RANS-based models of non-premixed jet flames are developed and explored. Flamelet-based RANS models are attractive for engineering applications relative to higher-fidelity methods because of their low computational costs. However, the various assumptions inherent in such models introduce errors that can significantly affect the accuracy of computed quantities of interest. In this work, we develop an approach to represent the model inadequacy of the flamelet-based RANS model. In particular, we pose a physics-based, stochastic PDE for the triple correlation of the mixture fraction. This additional uncertain state variable is then used to construct perturbations of the PDF for the instantaneous mixture fraction, which is used to obtain an uncertain perturbation of the flame temperature. A hydrogen-air non-premixed jet flame is used to demonstrate the representation of the inadequacy of the flamelet-based RANS model. This work was supported by DARPA-EQUiPS(Enabling Quantification of Uncertainty in Physical Systems) program.

Molecular Characterization of the SUMO-1 Modification of RanGAP1 and Its Role in Nuclear Envelope Association

PubMed Central

Mahajan, Rohit; Gerace, Larry; Melchior, Frauke

1998-01-01

The mammalian guanosine triphosphate (GTP)ase-activating protein RanGAP1 is the first example of a protein covalently linked to the ubiquitin-related protein SUMO-1. Here we used peptide mapping, mass spectroscopy analysis, and mutagenesis to identify the nature of the link between RanGAP1 and SUMO-1. SUMO-1 is linked to RanGAP1 via glycine 97, indicating that the last 4 amino acids of this 101– amino acid protein are proteolytically removed before its attachment to RanGAP1. Recombinant SUMO-1 lacking the last four amino acids is efficiently used for modification of RanGAP1 in vitro and of multiple unknown proteins in vivo. In contrast to most ubiquitinated proteins, only a single lysine residue (K526) in RanGAP1 can serve as the acceptor site for modification by SUMO-1. Modification of RanGAP1 with SUMO-1 leads to association of RanGAP1 with the nuclear envelope (NE), where it was previously shown to be required for nuclear protein import. Sufficient information for modification and targeting resides in a 25-kD domain of RanGAP1. RanGAP1–SUMO-1 remains stably associated with the NE during many cycles of in vitro import. This indicates that removal of RanGAP1 from the NE is not a required element of nuclear protein import and suggests that the reversible modification of RanGAP1 may have a regulatory role. PMID:9442102

RAN as a predictor of reading skills, and vice versa: results from a randomised reading intervention.

PubMed

Wolff, Ulrika

2014-07-01

Although phonemic awareness is a well-known factor predicting early reading development, there is also evidence that Rapid Automatized Naming (RAN) is an independent factor that contributes to early reading. The aim of this study is to examine phonemic awareness and RAN as predictors of reading speed, reading comprehension and spelling for children with reading difficulties. It also investigates a possible reciprocal relationship between RAN and reading skills, and the possibility of enhancing RAN by intervention. These issues are addressed by examining longitudinal data from a randomised reading intervention study carried out in Sweden for 9-year-old children with reading difficulties (N = 112). The intervention comprised three main elements: training of phonics, reading comprehension strategies and reading speed. The analysis of the data was carried out using structural equation modelling. The results demonstrated that after controlling for autoregressive effects and non-verbal IQ, RAN predicts reading speed whereas phonemic awareness predicts reading comprehension and spelling. RAN was significantly enhanced by training and a reciprocal relationship between reading speed and RAN was found. These findings contribute to support the view that both phonemic awareness and RAN independently influence early phases of reading, and that both are possible to enhance by training.

Capturing Cyclic Variability in EGR Dilute SI Combustion using Multi-Cycle RANS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Scarcelli, Riccardo; Sevik, James; Wallner, Thomas

Dilute combustion is an effective approach to increase the thermal efficiency of spark-ignition (SI) internal combustion engines (ICEs). However, high dilution levels typically result in large cycle-to-cycle variations (CCV) and poor combustion stability, therefore limiting the efficiency improvement. In order to extend the dilution tolerance of SI engines, advanced ignition systems are the subject of extensive research. When simulating the effect of the ignition characteristics on CCV, providing a numerical result matching the measured average in-cylinder pressure trace does not deliver useful information regarding combustion stability. Typically Large Eddy Simulations (LES) are performed to simulate cyclic engine variations, since Reynold-Averagedmore » Navier-Stokes (RANS) modeling is expected to deliver an ensemble-averaged result. In this paper it is shown that, when using RANS, the cyclic perturbations coming from different initial conditions at each cycle are not damped out even after many simulated cycles. As a result, multi-cycle RANS results feature cyclic variability. This allows evaluating the effect of advanced ignition sources on combustion stability but requires validation against the entire cycle-resolved experimental dataset. A single-cylinder GDI research engine is simulated using RANS and the numerical results for 20 consecutive engine cycles are evaluated for several operating conditions, including stoichiometric as well as EGR dilute operation. The effect of the ignition characteristics on CCV is also evaluated. Results show not only that multi-cycle RANS simulations can capture cyclic variability and deliver similar trends as the experimental data, but more importantly that RANS might be an effective, lower-cost alternative to LES for the evaluation of ignition strategies for combustion systems that operate close to the stability limit.« less

Rapid automatized naming (RAN) in children with ADHD: An ex-Gaussian analysis.

PubMed

Ryan, Matthew; Jacobson, Lisa A; Hague, Cole; Bellows, Alison; Denckla, Martha B; Mahone, E Mark

2017-07-01

Children with ADHD demonstrate increased frequent "lapses" in performance on tasks in which the stimulus presentation rate is externally controlled, leading to increased variability in response times. It is less clear whether these lapses are also evident during performance on self-paced tasks, e.g., rapid automatized naming (RAN), or whether RAN inter-item pause time variability uniquely predicts reading performance. A total of 80 children aged 9 to 14 years-45 children with attention-deficit/hyperactivity disorder (ADHD) and 35 typically developing (TD) children-completed RAN and reading fluency measures. RAN responses were digitally recorded for analyses. Inter-stimulus pause time distributions (excluding between-row pauses) were analyzed using traditional (mean, standard deviation [SD], coefficient of variation [CV]) and ex-Gaussian (mu, sigma, tau) methods. Children with ADHD were found to be significantly slower than TD children (p < .05) on RAN letter naming mean response time as well as on oral and silent reading fluency. RAN response time distributions were also significantly more variable (SD, tau) in children with ADHD. Hierarchical regression revealed that the exponential component (tau) of the letter-naming response time distribution uniquely predicted reading fluency in children with ADHD (p < .001, ΔR 2  = .16), even after controlling for IQ, basic reading, ADHD symptom severity and age. The findings suggest that children with ADHD (without word-level reading difficulties) manifest slowed performance on tasks of reading fluency; however, this "slowing" may be due in part to lapses from ongoing performance that can be assessed directly using ex-Gaussian methods that capture excessively long response times.

Cytochrome P4501A biomarker indication of the timeline of chronic exposure of Barrow’s goldeneyes to residual Exxon Valdez oil

USGS Publications Warehouse

Esler, Daniel N.; Ballachey, Brenda E.; Trust, Kimberly A.; Iverson, Samuel A.; Reed, John A.; Miles, A. Keith; Henderson, John D.; Woodin, Bruce R.; Stegeman, John J.; McAdie, Malcolm; Mulcahy, Daniel M.; Wilson, Barry W.

2011-01-01

We examined hepatic EROD activity, as an indicator of CYP1A induction, in Barrow’s goldeneyes captured in areas oiled during the 1989 Exxon Valdez spill and those from nearby unoiled areas. We found that average EROD activity differed between areas during 2005, although the magnitude of the difference was reduced relative to a previous study from 1996/1997, and we found that areas did not differ by 2009. Similarly, we found that the proportion of individuals captured from oiled areas with elevated EROD activity (⩾2 times unoiled average) declined from 41% in winter 1996/1997 to 10% in 2005 and 15% in 2009. This work adds to a body of literature describing the timelines over which vertebrates were exposed to residual Exxon Valdez oil and indicates that, for Barrow’s goldeneyes in Prince William Sound, exposure persisted for many years with evidence of substantially reduced exposure by 2 decades after the spill.

Effects of the earthquake of March 27, 1964, at Valdez, Alaska: Chapter C in The Alaska earthquake, March 27, 1964: effects on communities

USGS Publications Warehouse

Coulter, Henry Welty; Migliaccio, Ralph R.

1966-01-01

Valdez is situated on the seaward edge of a large outwash delta composed of a thick section of saturated silty sand and gravel. The earthquake of March 27, 1964, triggered a massive submarine slide, involving approximately 98 million cubic yards of material that destroyed the harbor facilities and nearshore installations. Waves generated by the slide and subsequent strong seiches did additional damage in the downtown area. Stresses generated by the seismic shocks and the slide developed an extensive system of fissures throughout the unconsolidated deposits at the head of the fiord. These fissures plus the shocks caused structural damage to many of the buildings in Valdez and destroyed the sewer and water systems. Removal of support from the face of the delta by submarine sliding allowed some of the material to move seaward and caused parts of the shore area to subside below high-tide level. A site for relocating the town of Valdez has been designated. It is situated on the Mineral Creek fan--an area underlain by coarse alluvial gravel. This relocation site is protected from sea waves by a series of bedrock ridges and islands that also provide a resistant buttress retaining and protecting the toe of the fan from danger of sliding or slumping. The absence of evidence of ground breakage on the Mineral Creek fan indicates that the coarse subsoils at the relocation site react favorably under seismic conditions.

RANS Simulation of the Separated Flow over a Bump with Active Control

NASA Technical Reports Server (NTRS)

Iaccarino, Gianluca; Marongiu, Claudio; Catalano, Pietro; Amato, Marcello

2003-01-01

The objective of this paper is to investigate the accuracy of Reynolds-Averaged Navier- Stokes (RANS) techniques in predicting the effect of steady and unsteady flow control devices. This is part of a larger effort in applying numerical simulation tools to investigate of the performance of synthetic jets in high Reynolds number turbulent flows. RANS techniques have been successful in predicting isolated synthetic jets as reported by Kral et al. Nevertheless, due to the complex, and inherently unsteady nature of the interaction between the synthetic jet and the external boundary layer flow, it is not clear whether RANS models can represent the turbulence statistics correctly.

Zonal PANS: evaluation of different treatments of the RANS-LES interface

NASA Astrophysics Data System (ADS)

Davidson, L.

2016-03-01

The partially Reynolds-averaged Navier-Stokes (PANS) model can be used to simulate turbulent flows either as RANS, large eddy simulation (LES) or DNS. Its main parameter is fk whose physical meaning is the ratio of the modelled to the total turbulent kinetic energy. In RANS fk = 1, in DNS fk = 0 and in LES fk takes values between 0 and 1. Three different ways of prescribing fk are evaluated for decaying grid turbulence and fully developed channel flow: fk = 0.4, fk = k3/2tot/ɛ and, from its definition, fk = k/ktot where ktot is the sum of the modelled, k, and resolved, kres, turbulent kinetic energy. It is found that the fk = 0.4 gives the best results. In Girimaji and Wallin, a method was proposed to include the effect of the gradient of fk. This approach is used at RANS- LES interface in the present study. Four different interface models are evaluated in fully developed channel flow and embedded LES of channel flow: in both cases, PANS is used as a zonal model with fk = 1 in the unsteady RANS (URANS) region and fk = 0.4 in the LES region. In fully developed channel flow, the RANS- LES interface is parallel to the wall (horizontal) and in embedded LES, it is parallel to the inlet (vertical). The importance of the location of the horizontal interface in fully developed channel flow is also investigated. It is found that the location - and the choice of the treatment at the interface - may be critical at low Reynolds number or if the interface is placed too close to the wall. The reason is that the modelled turbulent shear stress at the interface is large and hence the relative strength of the resolved turbulence is small. In RANS, the turbulent viscosity - and consequently also the modelled Reynolds shear stress - is only weakly dependent on Reynolds number. It is found in the present work that it also applies in the URANS region.

Cytochrome P4501A biomarker indication of oil exposure in harlequin ducks up to 20 years after the Exxon Valdez oil spill.

PubMed

Esler, Daniel; Trust, Kimberly A; Ballachey, Brenda E; Iverson, Samuel A; Lewis, Tyler L; Rizzolo, Daniel J; Mulcahy, Daniel M; Miles, A Keith; Woodin, Bruce R; Stegeman, John J; Henderson, John D; Wilson, Barry W

2010-05-01

Hydrocarbon-inducible cytochrome P4501A (CYP1A) expression was measured, as ethoxyresorufin-O-deethylase (EROD) activity, in livers of wintering harlequin ducks (Histrionicus histrionicus) captured in areas of Prince William Sound, Alaska, USA, oiled by the 1989 Exxon Valdez spill and in birds from nearby unoiled areas, during 2005 to 2009 (up to 20 years following the spill). The present work repeated studies conducted in 1998 that demonstrated that in harlequin ducks using areas that received Exxon Valdez oil, EROD activity was elevated nearly a decade after the spill. The present findings strongly supported the conclusion that average levels of hepatic EROD activity were higher in ducks from oiled areas than those from unoiled areas during 2005 to 2009. This result was consistent across four sampling periods; furthermore, results generated from two independent laboratories using paired liver samples from one of the sampling periods were similar. The EROD activity did not vary in relation to age, sex, or body mass of individuals, nor did it vary strongly by season in birds collected early and late in the winter of 2006 to 2007, indicating that these factors did not confound inferences about observed differences between oiled and unoiled areas. We interpret these results to indicate that harlequin ducks continued to be exposed to residual Exxon Valdez oil up to 20 years after the original spill. This adds to a growing body of literature suggesting that oil spills have the potential to affect wildlife for much longer time frames than previously assumed. Copyright (c) 2010 SETAC.

Cytochrome P4501A biomarker indication of oil exposure in harlequin ducks up to 20 years after the Exxon Valdez oil spill

USGS Publications Warehouse

Esler, Daniel N.; Trust, Kimberly A.; Ballachey, Brenda E.; Iverson, Samuel A.; Lewis, Tyler L.; Rizzolo, Daniel; Mulcahy, Daniel M.; Miles, A. Keith; Woodin, Bruce R.; Stegeman, John J.; Henderson, John D.; Wilson, Barry W.

2010-01-01

Hydrocarbon-inducible cytochrome P4501A (CYP1A) expression was measured, as ethoxyresorufin-O-deethylase (EROD) activity, in livers of wintering harlequin ducks (Histrionicus histrionicus) captured in areas of Prince William Sound, Alaska, USA, oiled by the 1989 Exxon Valdez spill and in birds from nearby unoiled areas, during 2005 to 2009 (up to 20 years following the spill). The present work repeated studies conducted in 1998 that demonstrated that in harlequin ducks using areas that received Exxon Valdez oil, EROD activity was elevated nearly a decade after the spill. The present findings strongly supported the conclusion that average levels of hepatic EROD activity were higher in ducks from oiled areas than those from unoiled areas during 2005 to 2009. This result was consistent across four sampling periods; furthermore, results generated from two independent laboratories using paired liver samples from one of the sampling periods were similar. The EROD activity did not vary in relation to age, sex, or body mass of individuals, nor did it vary strongly by season in birds collected early and late in the winter of 2006 to 2007, indicating that these factors did not confound inferences about observed differences between oiled and unoiled areas. We interpret these results to indicate that harlequin ducks continued to be exposed to residual Exxon Valdez oil up to 20 years after the original spill. This adds to a growing body of literature suggesting that oil spills have the potential to affect wildlife for much longer time frames than previously assumed.

Activation of Ran GTPase by a Legionella Effector Promotes Microtubule Polymerization, Pathogen Vacuole Motility and Infection

PubMed Central

Rothmeier, Eva; Pfaffinger, Gudrun; Hoffmann, Christine; Harrison, Christopher F.; Grabmayr, Heinrich; Repnik, Urska; Hannemann, Mandy; Wölke, Stefan; Bausch, Andreas; Griffiths, Gareth; Müller-Taubenberger, Annette; Itzen, Aymelt; Hilbi, Hubert

2013-01-01

The causative agent of Legionnaires' disease, Legionella pneumophila, uses the Icm/Dot type IV secretion system (T4SS) to form in phagocytes a distinct “Legionella-containing vacuole” (LCV), which intercepts endosomal and secretory vesicle trafficking. Proteomics revealed the presence of the small GTPase Ran and its effector RanBP1 on purified LCVs. Here we validate that Ran and RanBP1 localize to LCVs and promote intracellular growth of L. pneumophila. Moreover, the L. pneumophila protein LegG1, which contains putative RCC1 Ran guanine nucleotide exchange factor (GEF) domains, accumulates on LCVs in an Icm/Dot-dependent manner. L. pneumophila wild-type bacteria, but not strains lacking LegG1 or a functional Icm/Dot T4SS, activate Ran on LCVs, while purified LegG1 produces active Ran(GTP) in cell lysates. L. pneumophila lacking legG1 is compromised for intracellular growth in macrophages and amoebae, yet is as cytotoxic as the wild-type strain. A downstream effect of LegG1 is to stabilize microtubules, as revealed by conventional and stimulated emission depletion (STED) fluorescence microscopy, subcellular fractionation and Western blot, or by microbial microinjection through the T3SS of a Yersinia strain lacking endogenous effectors. Real-time fluorescence imaging indicates that LCVs harboring wild-type L. pneumophila rapidly move along microtubules, while LCVs harboring ΔlegG1 mutant bacteria are stalled. Together, our results demonstrate that Ran activation and RanBP1 promote LCV formation, and the Icm/Dot substrate LegG1 functions as a bacterial Ran activator, which localizes to LCVs and promotes microtubule stabilization, LCV motility as well as intracellular replication of L. pneumophila. PMID:24068924

Monitoring lingering oil from the Exxon Valdez spill on Gulf of Alaska armored beaches and mussel beds sixteen years post-spill

USGS Publications Warehouse

Irvine, G.V.; Mann, D.H.; Short, J.W.

2008-01-01

Final Rept. ; Prepared in Cooperation With Alaska Univ., Fairbanks. Inst. of Arctic Biology. Sponsored By National Marine Fisheries Service, Juneau, Ak. AlaskaFisheries Science Center. ; Stranded Exxon Valdez Oil Has Persisted for 16 Years At Boulder-Armored Beach Sites Along National Park Coastlines Bordering the Gulf of Alaska. These Sites Are Up to 640 Km From the Spill Origin and Were Contaminated By Oil Mousse, a Viscous Water-in-Oil Emulsion. Although Surface Oil Has Continued to Decline, Subsurface Oiling Persists in Patches. Especially Striking Is the General Lack of Weathering of Stranded Oil on Armored Beaches Over the Last 16 Years. At Three of the Four Sites Where Oil Was Sampled in 2005, the Oil Was Compositionally Similar to 11-Day Old Exxon Valdez Oil, Even After 16 Years. The Formation of Mousse Allowed Less-Weathered Oil to Be Transported Long Distances. The Sequestration of the Oil Beneath a Boulder Armor, Coupled With the Stability of the Boulder Armoring (Investigated By Examining Movement of Marked Boulders), Had Contributed to the Lengthy Persistence of This Stranded Oil. Opportunistic Sampling of Several Previously Studied Oiled Mussel Beds Indicates Continued Contamination of At Least One of the Sites By Not Very Weathered Exxon Valdez Oil. Long-Term Persistence of Oil in These Habitats Should Cause Reconsideration of Response Activities After Spills, and May Influence the Environmental Sensitivity Indices Applied to These Habitats. 

Examining the Cross-Lagged Relationships between RAN and Word Reading in Chinese

ERIC Educational Resources Information Center

Wei, Wei; Georgiou, George K.; Deng, Ciping

2015-01-01

The purpose of this 4-year longitudinal study was to specify the direction of the relationship between RAN and word reading (accuracy and fluency) in Chinese. This is important in light of arguments that the developmental relationships between RAN and reading can disclose changes in the reading processes underlying reading as development proceeds.…

Importin-β modulates the permeability of the nuclear pore complex in a Ran-dependent manner

PubMed Central

Lowe, Alan R; Tang, Jeffrey H; Yassif, Jaime; Graf, Michael; Huang, William YC; Groves, Jay T; Weis, Karsten; Liphardt, Jan T

2015-01-01

Soluble karyopherins of the importin-β (impβ) family use RanGTP to transport cargos directionally through the nuclear pore complex (NPC). Whether impβ or RanGTP regulate the permeability of the NPC itself has been unknown. In this study, we identify a stable pool of impβ at the NPC. A subpopulation of this pool is rapidly turned-over by RanGTP, likely at Nup153. Impβ, but not transportin-1 (TRN1), alters the pore's permeability in a Ran-dependent manner, suggesting that impβ is a functional component of the NPC. Upon reduction of Nup153 levels, inert cargos more readily equilibrate across the NPC yet active transport is impaired. When purified impβ or TRN1 are mixed with Nup153 in vitro, higher-order, multivalent complexes form. RanGTP dissolves the impβ•Nup153 complexes but not those of TRN1•Nup153. We propose that impβ and Nup153 interact at the NPC's nuclear face to form a Ran-regulated mesh that modulates NPC permeability. DOI: http://dx.doi.org/10.7554/eLife.04052.001 PMID:25748139

RAN/RANBP2 polymorphisms and neuroblastoma risk in Chinese children: a three-center case-control study.

PubMed

Wang, Juxiang; Zhuo, Zhenjian; Chen, Min; Zhu, Jinhong; Zhao, Jie; Zhang, Jiao; Chen, Shanshan; He, Jing; Zhou, Haixia

2018-04-28

The genetic etiology of sporadic neuroblastoma remains largely obscure. RAN and RANBP2 genes encode Ras-related nuclear protein and Ran-binding protein 2, respectively. These two proteins form Ran-RanBP2 complex that regulate various cellular activities including nuclear transport. Aberrant functions of the two proteins are implicated in carcinogenesis. Given the unknown role of RAN/RANBP2 single nucleotide polymorphisms (SNPs) in neuroblastoma risk, we performed a multi-center case-control study in Chinese children to assess the association of the RAN/RANBP2 SNPs with neuroblastoma risk. We analyzed three potentially functional SNPs in RAN gene (rs56109543 C>T, rs7132224 A>G, rs14035 C>T) and one in RANBP2 (rs2462788 C>T) in 429 cases and 884 controls. Odds ratios (ORs) and 95% confidence intervals (CIs) were used to access the association between these four polymorphisms and neuroblastoma risk. No single variant was found to statistically significantly associate with neuroblastoma risk. However, individuals with 3 protective genotypes were less likely to develop neuroblastoma, in comparison to non-carriers (adjusted OR=0.33; 95% CI=0.12-0.96; P =0.042), as well as those with 0-2 protective genotypes (adjusted OR=0.33; 95% CI=0.11-0.94; P =0.038). Stratified analysis revealed no significant association for any of the four polymorphisms. Further studies are warranted to validate the weak impact of RAN/RANBP2 SNPs on neuroblastoma risk.

Trans-Alaska crude oil pipeline. a petition for a waiver of compliance for liquid pipeline girth weld defects at the Valdez Terminal

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1979-02-08

A petition for a waiver of compliance for liquid pipeline girth weld defects at the Valdez Terminal of Alyeska Pipeline Service Co. has been granted by the U.S. Materials Transportation Bureau. The waiver covers 217 welds which contain defects such as arc burns not allowed in the regulations.

Validation of the Effectiveness of Simulator Experience vs Real-World Operational Experience in the Port of Valdez.

DTIC Science & Technology

1982-11-01

skills and the re- the safety of ships. The arrival of tention of such skills VLCCs and other ships of unprece- dented size in these waters created...Off Frack )eviation for Subjects with Simu- for Subjects with Valde: lator and No Simulator and No Valdez rhxperience 0 Experience The commonly...generator ownship’s maneuvers. The sky is de- also drives the collision avoidance picted without clouds and the water system, which can be slaved to

RCC1 regulates inner centromeric composition in a Ran-independent fashion.

PubMed

Zhang, Michael Shaofei; Furuta, Maiko; Arnaoutov, Alexei; Dasso, Mary

2018-01-01

RCC1 associates to chromatin dynamically within mitosis and catalyzes Ran-GTP production. Exogenous RCC1 disrupts kinetochore structure in Xenopus egg extracts (XEEs), but the molecular basis of this disruption remains unknown. We have investigated this question, utilizing replicated chromosomes that possess paired sister kinetochores. We find that exogenous RCC1 evicts a specific subset of inner KT proteins including Shugoshin-1 (Sgo1) and the chromosome passenger complex (CPC). We generated RCC1 mutants that separate its enzymatic activity and chromatin binding. Strikingly, Sgo1 and CPC eviction depended only on RCC1's chromatin affinity but not its capacity to produce Ran-GTP. RCC1 similarly released Sgo1 and CPC from synthetic kinetochores assembled on CENP-A nucleosome arrays. Together, our findings indicate RCC1 regulates kinetochores at the metaphase-anaphase transition through Ran-GTP-independent displacement of Sgo1 and CPC.

Harlequin duck (Histrionicus histrionicus) perspective: Harlequin duck population recovery following the Exxon Valdez oil spill: Progress, process, and constraints

USGS Publications Warehouse

Esler, Daniel N.; Bowman, Timothy D.; Trust, Kimberly A.; Ballachey, Brenda E.; Dean, Thomas A.; Jewett, Stephen C.; O'Clair, Charles E.; Holland-Bartels, Leslie E.

2002-01-01

Following the 1989 Exxon Valdez oil spill in Prince William Sound, Alaska, we studied the status of recovery of harlequin duck (Histrionicus histrionicus) populations during 1995-1998. We evaluated potential constraints to full recovery, including (1) exposure to residual oil, (2) food limitation, and (3) intrinsic demographic limitations on population growth rates. In this paper, we synthesize the findings from our work and incorporate information from other harlequin duck research and monitoring programs to provide a comprehensive evaluation of the response of this species to the Exxon Valdez oil spill. We conclude that harlequin duck populations had not fully recovered by 1998. Furthermore, adverse effects continued as many as 9 years after the oil spill, in contrast to the conventional paradigm that oil spill effects on bird populations are short-lived. These conclusions are based on the findings that (1) elevated cytochrome P450 induction on oiled areas indicated continued exposure to oil in 1998, (2) adult female winter survival was lower on oiled than unoiled areas during 1995-1998, (3) fall population surveys by the Alaska Department of Fish and Game indicated numerical declines in oiled areas during 1995-1997, and (4) densities on oiled areas in 1996 and 1997 were lower than expected using models that accounted for effects of habitat attributes. Based on hypothesized links between oil contamination and demography, we suggest that harlequin duck population recovery was constrained primarily by continued oil exposure. Full population recovery also will be delayed by the time necessary for intrinsic population growth to allow return to pre-spill numbers following cessation of residual oil spill effects. Although not all wildlife species were affected by the Exxon Valdez oil spill, and some others may have recovered quickly from any effects, harlequin duck life history characteristics and benthic, nearshore feeding habits make them susceptible to both initial

RANS Simulations using OpenFOAM Software

DTIC Science & Technology

2016-01-01

Averaged Navier- Stokes (RANS) simulations is described and illustrated by applying the simpleFoam solver to two case studies; two dimensional flow...to run in parallel over large processor arrays. The purpose of this report is to illustrate and test the use of the steady-state Reynolds Averaged ...Group in the Maritime Platforms Division he has been simulating fluid flow around ships and submarines using finite element codes, Lagrangian vortex

Ran Involved in the Development and Reproduction Is a Potential Target for RNA-Interference-Based Pest Management in Nilaparvata lugens

PubMed Central

Wang, Wei-Xia; Lai, Feng-Xiang; Fu, Qiang

2015-01-01

Ran (RanGTPase) in insects participates in the 20-hydroxyecdysone signal transduction pathway in which downstream genes, FTZ-F1, Krüppel-homolog 1 (Kr-h1) and vitellogenin, are involved. A putative Ran gene (NlRan) was cloned from Nilaparvata lugens, a destructive phloem-feeding pest of rice. NlRan has the typical Ran primary structure features that are conserved in insects. NlRan showed higher mRNA abundance immediately after molting and peaked in newly emerged female adults. Among the examined tissues ovary had the highest transcript level, followed by fat body, midgut and integument, and legs. Three days after dsNlRan injection the NlRan mRNA abundance in the third-, fourth-, and fifth-instar nymphs was decreased by 94.3%, 98.4% and 97.0%, respectively. NlFTZ-F1 expression levels in treated third- and fourth-instar nymphs were reduced by 89.3% and 23.8%, respectively. In contrast, NlKr-h1 mRNA levels were up-regulated by 67.5 and 1.5 folds, respectively. NlRan knockdown significantly decreased the body weights, delayed development, and killed >85% of the nymphs at day seven. Two apparent phenotypic defects were observed: (1) Extended body form, and failed to molt; (2) The cuticle at the notum was split open but cannot completely shed off. The newly emerged female adults from dsNlRan injected fifth-instar nymphs showed lower levels of NlRan and vitellogenin, lower weight gain and honeydew excretion comparing with the blank control, and no offspring. Those results suggest that NlRan encodes a functional protein that was involved in development and reproduction. The study established proof of concept that NlRan could serve as a target for dsRNA-based pesticides for N. lugens control. PMID:26554926

Long-term monitoring program: Evaluating chronic exposure of harlequin ducks and sea otters to lingering Exxon Valdez Oil in Western Prince William Sound

USGS Publications Warehouse

Esler, Daniel N.; Bowen, Lizabeth; Miles, A. Keith; Ballachey, Brenda E.; Bodkin, James L.

2015-01-01

We found that average cytochrome P4501A induction (as measured by EROD activity) during March 2014 was not elevated in wintering harlequin ducks captured in areas of Prince William Sound oiled by the 1989 Exxon Valdez oil spill, relative to those captured in unoiled areas. This result is consistent with findings from March 2013. We interpret these findings to indicate that exposure of harlequin ducks to residual Exxon Valdez oil abated within 24 years after the original spill. Results from preceding sampling in 2011 indicated that EROD activity was elevated in harlequin ducks in oiled relative to unoiled areas, although the magnitude of elevation was lower than in previous years (1998-2009), suggesting that the rate or intensity of exposure was diminishing by 2011. The data presented in this report add to a growing body of literature indicating that persistence of oil in the environment, and exposure of wildlife to that oil, can occur over much longer time frames than previously assumed.

The effect of epsilon-caproyl/D,L-lactyl unit composition on the hydrolytic degradation of poly(D,L-lactide-ran-epsilon-caprolactone)-poly(ethylene glycol)-poly(D,L-lactide-ran-epsilon-caprolactone).

PubMed

Cho, Hanjin; An, Jeongho

2006-02-01

The degradation of P(DLAX-ran-CLY)-b-PEG-b-P(DLAX-ran-CLY)s ( P(DLAX-ran-CLY): Poly(D,L-lactide-ran-epsilon-caprolactone), PEG: Poly(ethylene glycol), X: D,L-lactyl unit fraction, Y: epsilon-caproyl unit fraction) is investigated. The fraction of DLA in the both end blocks is varied while the overall molecular weight and molecular weight of PEG are kept constant. DSC, XRD and GPC are employed to track the degradation process up to 200 days. Also the change in the surface and cross-sectional morphology is provided by SEM micro-photographs. The result of water absorption and weight loss characterization reveals that the incorporation of DLA in the polyester block could be an effective tool to facilitate degradation as well as water absorption. By tracking the change of molecular weight and polydispersity, chain scission and transport or removal of degraded product from the specimen were found to play a complex role in overall degradation.

LES, DNS and RANS for the analysis of high-speed turbulent reacting flows

NASA Technical Reports Server (NTRS)

Givi, Peyman

1994-01-01

The objective of this research is to continue our efforts in advancing the state of knowledge in Large Eddy Simulation (LES), Direct Numerical Simulation (DNS), and Reynolds Averaged Navier Stokes (RANS) methods for the analysis of high-speed reacting turbulent flows. In the first phase of this research, conducted within the past six months, focus was in three directions: RANS of turbulent reacting flows by Probability Density Function (PDF) methods, RANS of non-reacting turbulent flows by advanced turbulence closures, and LES of mixing dominated reacting flows by a dynamics subgrid closure. A summary of our efforts within the past six months of this research is provided in this semi-annual progress report.

RanGTPase regulates the interaction between the inner nuclear membrane proteins, Samp1 and Emerin.

PubMed

Vijayaraghavan, Balaje; Figueroa, Ricardo A; Bergqvist, Cecilia; Gupta, Amit J; Sousa, Paulo; Hallberg, Einar

2018-06-01

Samp1, spindle associated membrane protein 1, is a type II integral membrane protein localized in the inner nuclear membrane. Recent studies have shown that the inner nuclear membrane protein, Emerin and the small monomeric GTPase, Ran are direct binding partners of Samp1. Here we addressed the question whether Ran could regulate the interaction between Samp1 and Emerin in the inner nuclear membrane. To investigate the interaction between Samp1 and Emerin in live cells, we performed FRAP experiments in cells overexpressing YFP-Emerin. We compared the mobility of YFP-Emerin in Samp1 knock out cells and cells overexpressing Samp1. The results showed that the mobility of YFP-Emerin was higher in Samp1 knock out cells and lower in cells overexpressing Samp1, suggesting that Samp1 significantly attenuates the mobility of Emerin in the nuclear envelope. FRAP experiments using tsBN2 cells showed that the mobility of Emerin depends on RanGTP. Consistently, in vitro binding experiments showed that the affinity between Samp1 and Emerin is decreased in the presence of Ran, suggesting that Ran attenuates the interaction between Samp1 and Emerin. This is the first demonstration that Ran can regulate the interaction between two proteins in the nuclear envelope. Copyright © 2018 The Authors. Published by Elsevier B.V. All rights reserved.

Tanker spills Norwegian crude oil off Shetlands

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1993-01-11

This paper reports that crude oil was spilling last week from the U.S. owned Braer tanker after the 89,000 dwt vessel ran aground on the south end of Scotland's Shetland Islands. Workers were trying to assess the extent of damage to the tanker, shoreline, and wildlife after the January 5 accident. Braer's cargo amounted to 607,000 bbl of Norwegian oil bound for Canada. Braer loaded its cargo and sailed January 3 from Den norske stats oljeselskap AS's Mongstad, Norway, terminal with crude from Gullfaks field in the Norwegian North Sea. The $11 million shipment was destined for Ultramar Canada Inc.'smore » 125,000 b/d refinery at St. Romuald, Que.« less

Hydrologic data collection activities in the Solomon Gulch basin near Valdez, Alaska

USGS Publications Warehouse

Bigelow, B.B.

1988-01-01

In 1981, the Alaska Power Authority completed construction of a dam spillway at the north end of Solomon Lake near Valdez. Regulation and diversion from the dam since 1982 have significantly altered the natural flow characteristics of Solomon Gulch. In September 1986, the Geological Survey began data collection to determine mean daily discharge at four sites below Solomon Lake and thus document the effects of regulation and diversion of water on the flow at various points in the system. Periodic discharge measurements and continuous records of water stage were obtained at two of the sites, and daily discharge values were computed for all four sites. The report contains descriptions of the data collection sites and the discharge records for each site for September 1986 and water year 1987. (USGS)

Accumulation of polycyclic aromatic hydrocarbons by Neocalanus copepods in Port Valdez, Alaska.

PubMed

Carls, Mark G; Short, Jeffrey W; Payne, James

2006-11-01

Sampling zooplankton is a useful strategy for observing trace hydrocarbon concentrations in water because samples represent an integrated average over a considerable effective sampling volume and are more representative of the sampled environment than discretely collected water samples. We demonstrate this method in Port Valdez, Alaska, an approximately 100 km(2) basin that receives about 0.5-2.4 kg of polynuclear aromatic hydrocarbons (PAH) per day. Total PAH (TPAH) concentrations (0.61-1.31 microg/g dry weight), composition, and spatial distributions in a lipid-rich copepod, Neocalanus were consistent with the discharge as the source of contamination. Although Neocalanus acquire PAH from water or suspended particulate matter, total PAH concentrations in these compartments were at or below method detection limits, demonstrating plankton can amplify trace concentrations to detectable levels useful for study.

Hybrid LES/RANS Simulation of Transverse Sonic Injection into a Mach 2 Flow

NASA Technical Reports Server (NTRS)

Boles, John A.; Edwards, Jack R.; Baurle, Robert A.

2008-01-01

A computational study of transverse sonic injection of air and helium into a Mach 1.98 cross-flow is presented. A hybrid large-eddy simulation / Reynolds-averaged Navier-Stokes (LES/RANS) turbulence model is used, with the two-equation Menter baseline (Menter-BSL) closure for the RANS part of the flow and a Smagorinsky-type model for the LES part of the flow. A time-dependent blending function, dependent on modeled turbulence variables, is used to shift the closure from RANS to LES. Turbulent structures are initiated and sustained through the use of a recycling / rescaling technique. Two higher-order discretizations, the Piecewise Parabolic Method (PPM) of Colella and Woodward, and the SONIC-A ENO scheme of Suresh and Huyhn are used in the study. The results using the hybrid model show reasonably good agreement with time-averaged Mie scattering data and with experimental surface pressure distributions, even though the penetration of the jet into the cross-flow is slightly over-predicted. The LES/RANS results are used to examine the validity of commonly-used assumptions of constant Schmidt and Prandtl numbers in the intense mixing zone downstream of the injection location.

Development of a Hybrid RANS/LES Method for Compressible Mixing Layer Simulations

NASA Technical Reports Server (NTRS)

Georgiadis, Nicholas J.; Alexander, J. Iwan D.; Reshotko, Eli

2001-01-01

A hybrid method has been developed for simulations of compressible turbulent mixing layers. Such mixing layers dominate the flows in exhaust systems of modem day aircraft and also those of hypersonic vehicles currently under development. The hybrid method uses a Reynolds-averaged Navier-Stokes (RANS) procedure to calculate wall bounded regions entering a mixing section, and a Large Eddy Simulation (LES) procedure to calculate the mixing dominated regions. A numerical technique was developed to enable the use of the hybrid RANS/LES method on stretched, non-Cartesian grids. The hybrid RANS/LES method is applied to a benchmark compressible mixing layer experiment. Preliminary two-dimensional calculations are used to investigate the effects of axial grid density and boundary conditions. Actual LES calculations, performed in three spatial directions, indicated an initial vortex shedding followed by rapid transition to turbulence, which is in agreement with experimental observations.

Ran GTPase protein promotes human pancreatic cancer proliferation by deregulating the expression of Survivin and cell cycle proteins

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deng, Lin; Department of Oncology, Tangdu Hospital, Fourth Military Medical University, Xi’an, Shaanxi 710038; Lu, Yuanyuan

2013-10-18

Highlights: •Overexpression of Ran in pancreatic cancer was correlated with histological grade. •Downregulation of Ran could induce cell apoptosis and inhibit cell proliferation. •The effects were mediated by cell cycle proteins, Survivin and cleaved Caspase-3. -- Abstract: Ran, a member of the Ras GTPase family, has important roles in nucleocytoplasmic transport. Herein, we detected Ran expression in pancreatic cancer and explored its potential role on tumour progression. Overexpressed Ran in pancreatic cancer tissues was found highly correlated with the histological grade. Downregulation of Ran led to significant suppression of cell proliferation, cell cycle arrest at the G1/S phase and inductionmore » of apoptosis. In vivo studies also validated that result. Further studies revealed that those effects were at least partly mediated by the downregulation of Cyclin A, Cyclin D1, Cyclin E, CDK2, CDK4, phospho-Rb and Survivin proteins and up regulation of cleaved Caspase-3.« less

Multi-year persistence of oil mousse on high energy beaches distant from the Exxon Valdez spill origin

USGS Publications Warehouse

Irvine, Gail V.; Mann, Daniel H.; Short, Jeffrey W.

1999-01-01

For at least 5 yr after the Exxon Valdez spill, relatively unweathered oil mousse has persisted on the exposed rocky shores of Shelikof Strait 500 km from Prince William Sound, Alaska. Previously it was thought that oil would be rapidly removed from such geomorphic settings by wave action. Oil mousse persists at sites in Katmai National Park and Preserve (NP&P) where it was stranded high in the intertidal zone under a lag of large boulders. These boulders armor the beach, preventing waves from disturbing the substrate and its included oil. Weathering of this stranded mousse has been slight – mousse sampled in 1989, 1992 and 1994 show negligible changes in polynuclear aromatic hydrocarbons compared to 11-day old Exxon Valdez crude. The preservation of this oil is due to its transport as mousse boli whose interiors largely escape weathering, followed by its sheltering in the interstices of boulder-armored beaches. The transport of mousse may allow for the long distance dispersal of less weathered, and hence still toxic oil. Our findings suggest that the low ecological sensitivity ratings previously applied to exposed, rocky shorelines need to be modified. The biological threat posed by oil stranded on the Katmai NP&P coast probably is slight because of its small amount and sequestered state. However, it still possesses the ability to be chemically toxic and could be released through disturbance of the armoring boulders by unusually high wave events.

Numerical simulation of the submarine landslides and tsunami occurred at Port Valdez, AK during 1964 Alaska Earthquake with Landslide-HySEA model

NASA Astrophysics Data System (ADS)

González-Vida, Jose M.; Ortega, Sergio; Macías, Jorge; Castro, Manuel J.; Escalante, Cipriano

2017-04-01

This is a benchmark problem recently proposed in the framework of the Landslide Tsunami Model Benchmarking Workshop organized by the NTHMP (National tsunami Hazard mitigation program -USA-) at Galveston (USA). The benchmark is based on the historical event which occurred at Port Valdez, AK during the Alaska Earthquake of March 27, 1964. The great disaster during the Mw9.2 Alaska Earthquake happened in the dock and harbour area of Port Valdez, where a massive submarine landslide generated a tsunami, inundating the waterfront up to two blocks inland. Then, a second wave crossed the waterfront 10-15 minutes after the first wave, carrying a large amount of the debris. It has been described as a violent surging wave only slightly smaller than the first. It is believed that the second wave which flooded the waterfront was originated at the other side of the Port Valdez near the Shoup Bay moraine. The benchmark consists in simulating with the (GPU based) Landslide-HySEA model the extent of inundation for two slide events, based on before and after bathymetry data, eye-witness observations of the event, and observed runup distribution. First, both landslides have been simulated separately, studying time series of the water waves at determined locations, runups at different areas and the extent of inundation around the first two blocks inland of Port Valdez. Then, the two landslides are triggered at the same time and the joint effect is studied. Obtained results are satisfactory and they agree with the existing observations. References Castro, M. J., Fernández-Nieto, E. D., González-Vida, J. M., Parés, C. (2011). Numerical Treatment of the Loss of Hyperbolicity of the Two-Layer Shallow-Water System. Journal of Scientific Computing, 48(1):16-40. Fernández, E.H., Bouchut, F., Bresh, D., Castro, M.J. and, Mangeney, A. (2008). A new Savage-Hutter type model for submarine avalanches and generated tsunami. J. Comp. Phys., 227: 7720-7754. Fernández-Nieto, E.D., Castro, M

Data-free and data-driven spectral perturbations for RANS UQ

NASA Astrophysics Data System (ADS)

Edeling, Wouter; Mishra, Aashwin; Iaccarino, Gianluca

2017-11-01

Despite recent developments in high-fidelity turbulent flow simulations, RANS modeling is still vastly used by industry, due to its inherent low cost. Since accuracy is a concern in RANS modeling, model-form UQ is an essential tool for assessing the impacts of this uncertainty on quantities of interest. Applying the spectral decomposition to the modeled Reynolds-Stress Tensor (RST) allows for the introduction of decoupled perturbations into the baseline intensity (kinetic energy), shape (eigenvalues), and orientation (eigenvectors). This constitutes a natural methodology to evaluate the model form uncertainty associated to different aspects of RST modeling. In a predictive setting, one frequently encounters an absence of any relevant reference data. To make data-free predictions with quantified uncertainty we employ physical bounds to a-priori define maximum spectral perturbations. When propagated, these perturbations yield intervals of engineering utility. High-fidelity data opens up the possibility of inferring a distribution of uncertainty, by means of various data-driven machine-learning techniques. We will demonstrate our framework on a number of flow problems where RANS models are prone to failure. This research was partially supported by the Defense Advanced Research Projects Agency under the Enabling Quantification of Uncertainty in Physical Systems (EQUiPS) project (technical monitor: Dr Fariba Fahroo), and the DOE PSAAP-II program.

Cessation of oil exposure in harlequin ducks after the Exxon Valdez oil spill: Cytochrome P4501A biomarker evidence.

PubMed

Esler, Daniel; Ballachey, Brenda E; Bowen, Lizabeth; Miles, A Keith; Dickson, Rian D; Henderson, John D

2017-05-01

The authors quantified hepatic hydrocarbon-inducible cytochrome P4501A (CYP1A) expression, as ethoxyresorufin-O-deethylase (EROD) activity, in wintering harlequin ducks (Histrionicus histrionicus) captured in Prince William Sound, Alaska (USA), during 2011, 2013, and 2014 (22-25 yr following the 1989 Exxon Valdez oil spill). Average EROD activity was compared between birds from areas oiled by the spill and those from nearby unoiled areas. The present study replicated studies conducted from 1998 to 2009 demonstrating that harlequin ducks using areas oiled in 1989 had elevated EROD activity, indicative of oil exposure, up to 2 decades post spill. In the present study, it was found that average EROD activity during March 2011 was significantly higher in wintering harlequin ducks captured in oiled areas relative to unoiled areas, which the authors interpret to indicate that harlequin ducks continued to be exposed to residual Exxon Valdez oil up to 22 yr after the original spill. However, the 2011 results also indicated reductions in exposure relative to previous years. Average EROD activity in birds from oiled areas was approximately 2 times that in birds from unoiled areas in 2011, compared with observations from 2005 to 2009, in which EROD activity was 3 to 5 times higher in oiled areas. It was also found that average EROD activity during March 2013 and March 2014 was not elevated in wintering harlequin ducks from oiled areas. The authors interpret these findings to indicate that exposure of harlequin ducks to residual Exxon Valdez oil abated within 24 yr after the original spill. The present study finalizes a timeline of exposure, extending over 2 decades, for a bird species thought to be particularly vulnerable to oil contamination in marine environments. Environ Toxicol Chem 2017;36:1294-1300. Published 2016 Wiley Periodicals Inc. on behalf of SETAC. This article is a US government work and, as such, is in the public domain in the United States of America

Bioremediation of the Exxon Valdez oil in Prince William Sound beaches.

PubMed

Boufadel, Michel C; Geng, Xiaolong; Short, Jeff

2016-12-15

Oil from the Exxon Valdez laden with polycyclic aromatic hydrocarbons (PAH) has persisted on some beaches in Prince William Sound, Alaska, >20years after these beaches became contaminated. The degradation rate of the total PAH (TPAH) is estimated at 1% per year. Low oxygen concentrations were found to be the major factor causing oil persistence, and bioremediation through the injection of hydrogen peroxide and nutrients deep into four beaches in PWS were conducted in the summers of 2011 and 2012. It was found that due to the treatment, the TPAH biodegradation rate was between 13% and 70% during summer 2011 and summer 2012. The results also showed high efficiency in the delivery of oxygen and nutrient to the contaminated areas of the beach. However, the approach has an environmental cost associated with it, and stakeholders would need to conduct a rigorous net environmental benefit analysis (NEBA) for pursuing the bioremediation of submerged contaminated sediments, especially in higher latitudes. Copyright © 2016 Elsevier Ltd. All rights reserved.

A Riemann solver for RANS

NASA Astrophysics Data System (ADS)

Chuvakhov, P. V.

2014-01-01

An exact expression for a system of both eigenvalues and right/left eigenvectors of a Jacobian matrix for a convective two-equation differential closure RANS operator split along a curvilinear coordinate is derived. It is shown by examples of numerical modeling of supersonic flows over a flat plate and a compression corner with separation that application of the exact system of eigenvalues and eigenvectors to the Roe approach for approximate solution of the Riemann problem gives rise to an increase in the convergence rate, better stability and higher accuracy of a steady-state solution in comparison with those in the case of an approximate system.

Triplin, a small molecule, reveals copper ion transport in ethylene signaling from ATX1 to RAN1

PubMed Central

Li, Wenbo; Ye, Yajin; Lu, Juan; Yeh, Kuo-Chen; Xiao, Youli; Li, Laigeng; Binder, Brad M.

2017-01-01

Copper ions play an important role in ethylene receptor biogenesis and proper function. The copper transporter RESPONSIVE-TO-ANTAGONIST1 (RAN1) is essential for copper ion transport in Arabidopsis thaliana. However it is still unclear how copper ions are delivered to RAN1 and how copper ions affect ethylene receptors. There is not a specific copper chelator which could be used to explore these questions. Here, by chemical genetics, we identified a novel small molecule, triplin, which could cause a triple response phenotype on dark-grown Arabidopsis seedlings through ethylene signaling pathway. ran1-1 and ran1-2 are hypersensitive to triplin. Adding copper ions in growth medium could partially restore the phenotype on plant caused by triplin. Mass spectrometry analysis showed that triplin could bind copper ion. Compared to the known chelators, triplin acts more specifically to copper ion and it suppresses the toxic effects of excess copper ions on plant root growth. We further showed that mutants of ANTIOXIDANT PROTEIN1 (ATX1) are hypersensitive to tiplin, but with less sensitivity comparing with the ones of ran1-1 and ran1-2. Our study provided genetic evidence for the first time that, copper ions necessary for ethylene receptor biogenesis and signaling are transported from ATX1 to RAN1. Considering that triplin could chelate copper ions in Arabidopsis, and copper ions are essential for plant and animal, we believe that, triplin not only could be useful for studying copper ion transport of plants, but also could be useful for copper metabolism study in animal and human. PMID:28388654

Triplin, a small molecule, reveals copper ion transport in ethylene signaling from ATX1 to RAN1.

PubMed

Li, Wenbo; Lacey, Randy F; Ye, Yajin; Lu, Juan; Yeh, Kuo-Chen; Xiao, Youli; Li, Laigeng; Wen, Chi-Kuang; Binder, Brad M; Zhao, Yang

2017-04-01

Copper ions play an important role in ethylene receptor biogenesis and proper function. The copper transporter RESPONSIVE-TO-ANTAGONIST1 (RAN1) is essential for copper ion transport in Arabidopsis thaliana. However it is still unclear how copper ions are delivered to RAN1 and how copper ions affect ethylene receptors. There is not a specific copper chelator which could be used to explore these questions. Here, by chemical genetics, we identified a novel small molecule, triplin, which could cause a triple response phenotype on dark-grown Arabidopsis seedlings through ethylene signaling pathway. ran1-1 and ran1-2 are hypersensitive to triplin. Adding copper ions in growth medium could partially restore the phenotype on plant caused by triplin. Mass spectrometry analysis showed that triplin could bind copper ion. Compared to the known chelators, triplin acts more specifically to copper ion and it suppresses the toxic effects of excess copper ions on plant root growth. We further showed that mutants of ANTIOXIDANT PROTEIN1 (ATX1) are hypersensitive to tiplin, but with less sensitivity comparing with the ones of ran1-1 and ran1-2. Our study provided genetic evidence for the first time that, copper ions necessary for ethylene receptor biogenesis and signaling are transported from ATX1 to RAN1. Considering that triplin could chelate copper ions in Arabidopsis, and copper ions are essential for plant and animal, we believe that, triplin not only could be useful for studying copper ion transport of plants, but also could be useful for copper metabolism study in animal and human.

Overexpression of OsRAN2 in rice and Arabidopsis renders transgenic plants hypersensitive to salinity and osmotic stress

PubMed Central

Zang, Aiping; Xu, Xiaojie; Neill, Steven; Cai, Weiming

2010-01-01

Nucleo-cytoplasmic partitioning of regulatory proteins is increasingly being recognized as a major control mechanism for the regulation of signalling in plants. Ras-related nuclear protein (Ran) GTPase is required for regulating transport of proteins and RNA across the nuclear envelope and also has roles in mitotic spindle assembly and nuclear envelope (NE) assembly. However, thus far little is known of any Ran functions in the signalling pathways in plants in response to changing environmental stimuli. The OsRAN2 gene, which has high homology (77% at the amino acid level) with its human counterpart, was isolated here. Subcellular localization results showed that OsRan2 is mainly localized in the nucleus, with some in the cytoplasm. Transcription of OsRAN2 was reduced by salt, osmotic, and exogenous abscisic acid (ABA) treatments, as determined by real-time PCR. Overexpression of OsRAN2 in rice resulted in enhanced sensitivity to salinity, osmotic stress, and ABA. Seedlings of transgenic Arabidopsis thaliana plants overexpressing OsRAN2 were overly sensitive to salinity stress and exogenous ABA treatment. Furthermore, three ABA- or stress-responsive genes, AtNCED3, AtPLC1, and AtMYB2, encoding a key enzyme in ABA synthesis, a phospholipase C homologue, and a putative transcriptional factor, respectively, were shown to have differentially induced expression under salinity and ABA treatments in transgenic and wild-type Arabidopsis plants. OsRAN2 overexpression in tobacco epidermal leaf cells disturbed the nuclear import of a maize (Zea mays L.) leaf colour transcription factor (Lc). In addition, gene-silenced rice plants generated via RNA interference (RNAi) displayed pleiotropic developmental abnormalities and were male sterile. PMID:20018899

Persistence of 10-year old Exxon Valdez oil on Gulf of Alaska beaches: The importance of boulder-armoring

USGS Publications Warehouse

Irvine, Gail V.; Mann, Daniel H.; Short, Jeffrey W.

2006-01-01

Oil stranded as a result of the 1989 Exxon Valdez spill has persisted for >10 years at study sites on Gulf of Alaska shores distant from the spill's origin. These sites were contaminated by "oil mousse", which persists in these settings due to armoring of underlying sediments and their included oil beneath boulders. The boulder-armored beaches that we resampled in 1999 showed continued contamination by subsurface oil, despite their exposure to moderate to high wave energies. Significant declines in surface oil cover occurred at all study sites. In contrast, mousse has persisted under boulders in amounts similar to what was present in 1994 and probably in 1989. Especially striking is the general lack of weathering of this subsurface oil over the last decade. Oil at five of the six armored-beach sites 10 years after the spill is compositionally similar to 11-day old Exxon Valdez oil. Analysis of movements in the boulder-armor that covers the study beaches reveals that only minor shifts have occurred since 1994, suggesting that over the last five, and probably over the last 10 years, boulder-armors have remained largely unmoved at the study sites. These findings emphasize the importance of particular geomorphic parameters in determining stranded oil persistence. Surface armoring, combined with stranding of oil mousse, results in the unexpectedly lengthy persistence of only lightly to moderately weathered oil within otherwise high-energy wave environments.

Statistical Inference of a RANS closure for a Jet-in-Crossflow simulation

NASA Astrophysics Data System (ADS)

Heyse, Jan; Edeling, Wouter; Iaccarino, Gianluca

2016-11-01

The jet-in-crossflow is found in several engineering applications, such as discrete film cooling for turbine blades, where a coolant injected through hols in the blade's surface protects the component from the hot gases leaving the combustion chamber. Experimental measurements using MRI techniques have been completed for a single hole injection into a turbulent crossflow, providing full 3D averaged velocity field. For such flows of engineering interest, Reynolds-Averaged Navier-Stokes (RANS) turbulence closure models are often the only viable computational option. However, RANS models are known to provide poor predictions in the region close to the injection point. Since these models are calibrated on simple canonical flow problems, the obtained closure coefficient estimates are unlikely to extrapolate well to more complex flows. We will therefore calibrate the parameters of a RANS model using statistical inference techniques informed by the experimental jet-in-crossflow data. The obtained probabilistic parameter estimates can in turn be used to compute flow fields with quantified uncertainty. Stanford Graduate Fellowship in Science and Engineering.

Hybrid LES/RANS simulation of a turbulent boundary layer over a rectangular cavity

NASA Astrophysics Data System (ADS)

Zhang, Qi; Haering, Sigfried; Oliver, Todd; Moser, Robert

2016-11-01

We report numerical investigations of a turbulent boundary layer over a rectangular cavity using a new hybrid RANS/LES model and the traditional Detached Eddy Simulation (DES). Our new hybrid method aims to address many of the shortcomings from the traditional DES. In the new method, RANS/LES blending controlled by a parameter that measures the ratio of the modeled subgrid kinetic energy to an estimate of the subgrid energy based on the resolved scales. The result is a hybrid method automatically resolves as much turbulence as can be supported by the grid and transitions appropriately from RANS to LES without the need for ad hoc delaying functions that are often required for DES. Further, the new model is designed to improve upon DES by accounting for the effects of grid anisotropy and inhomogeneity in the LES region. We present comparisons of the flow features inside the cavity and the pressure time history and spectra as computed using the new hybrid model and DES.

A Comparison of Hybrid Reynolds Averaged Navier Stokes/Large Eddy Simulation (RANS/LES) and Unsteady RANS Predictions of Separated Flow for a Variable Speed Power Turbine Blade Operating with Low Inlet Turbulence Levels

DTIC Science & Technology

2017-10-01

Facility is a large-scale cascade that allows detailed flow field surveys and blade surface measurements.10–12 The facility has a continuous run ...structured grids at 2 flow conditions, cruise and takeoff, of the VSPT blade . Computations were run in parallel on a Department of Defense...RANS/LES) and Unsteady RANS Predictions of Separated Flow for a Variable-Speed Power- Turbine Blade Operating with Low Inlet Turbulence Levels

Nanoformulation of D-α-tocopheryl polyethylene glycol 1000 succinate-b-poly(ε-caprolactone-ran-glycolide) diblock copolymer for breast cancer therapy.

PubMed

Huang, Laiqiang; Chen, Hongbo; Zheng, Yi; Song, Xiaosong; Liu, Ranyi; Liu, Kexin; Zeng, Xiaowei; Mei, Lin

2011-10-01

The purpose of this research was to develop formulation of docetaxel-loaded biodegradable TPGS-b-(PCL-ran-PGA) nanoparticles for breast cancer chemotherapy. A novel diblock copolymer, d-α-tocopheryl polyethylene glycol 1000 succinate-b-poly(ε-caprolactone-ran-glycolide) [TPGS-b-(PCL-ran-PGA)], was synthesized from ε-caprolactone, glycolide and d-α-tocopheryl polyethylene glycol 1000 succinate by ring-opening polymerization using stannous octoate as catalyst. The obtained copolymers were characterized by (1)H NMR, GPC and TGA. The docetaxel-loaded TPGS-b-(PCL-ran-PGA) nanoparticles were prepared and characterized. The data showed that the fluorescence TPGS-b-(PCL-ran-PGA) nanoparticles could be internalized by MCF-7 cells. The TPGS-b-(PCL-ran-PGA) nanoparticles achieved significantly higher level of cytotoxicity than commercial Taxotere®. MCF-7 xenograft tumor model on SCID mice showed that docetaxel formulated in the TPGS-b-(PCL-ran-PGA) nanoparticles could effectively inhibit the growth of tumor over a longer period of time than Taxotere® at the same dose. In conclusion, the TPGS-b-(PCL-ran-PGA) copolymer could be acted as a novel and potential biologically active polymeric material for nanoformulation in breast cancer chemotherapy. This journal is © The Royal Society of Chemistry 2011

Visual Processing Deficits in Children with Slow RAN Performance

ERIC Educational Resources Information Center

Stainthorp, Rhona; Stuart, Morag; Powell, Daisy; Quinlan, Philip; Garwood, Holly

2010-01-01

Two groups of 8- to 10-year-olds differing in rapid automatized naming speed but matched for age, verbal and nonverbal ability, phonological awareness, phonological memory, and visual acuity participated in four experiments investigating early visual processing. As low RAN children had significantly slower simple reaction times (SRT) this was…

Immediate impact of the 'Exxon Valdez' oil spill on marine birds

USGS Publications Warehouse

Piatt, John F.; Lensink, Calvin J.; Butler, William; Kendziorek, Marshal

1990-01-01

On 24 March 1989, the oil tanker 'Exxon Valdez' spilled 260,000 barrels of crude oil in Prince William Sound, Alaska. Oil eventually drifted over $30,000\\ {\\rm km}^{2}$ of coastal and offshore waters occupied by approximately one million marine birds. More than 30,000 dead birds of 90 species were retrieved from polluted areas by 1 August 1989. Of those identified, murres (74%), other alcids (7.0%), and sea ducks (5.3%) suffered the highest mortality from oil, and most (88%) birds were killed outside of Prince William Sound. A colony of 129,000 murres at the Barren Islands was probably devastated. Another 7,000 birds were retrieved between 1 August and 13 October, but most of those birds appeared to have died from natural causes. This later die-off was composed largely of shearwaters and other procellariids (51%), gulls (22%), and puffins (14%). Based on aerial and ship-based surveys for populations at risk, and extrapolating from the number of dead birds recovered, we estimate that the total kill from oil pollution was from 100,000 to 300,000 birds.

Assessment of RANS and LES Turbulence Modeling for Buoyancy-Aided/Opposed Forced and Mixed Convection

NASA Astrophysics Data System (ADS)

Clifford, Corey; Kimber, Mark

2017-11-01

Over the last 30 years, an industry-wide shift within the nuclear community has led to increased utilization of computational fluid dynamics (CFD) to supplement nuclear reactor safety analyses. One such area that is of particular interest to the nuclear community, specifically to those performing loss-of-flow accident (LOFA) analyses for next-generation very-high temperature reactors (VHTR), is the capacity of current computational models to predict heat transfer across a wide range of buoyancy conditions. In the present investigation, a critical evaluation of Reynolds-averaged Navier-Stokes (RANS) and large-eddy simulation (LES) turbulence modeling techniques is conducted based on CFD validation data collected from the Rotatable Buoyancy Tunnel (RoBuT) at Utah State University. Four different experimental flow conditions are investigated: (1) buoyancy-aided forced convection; (2) buoyancy-opposed forced convection; (3) buoyancy-aided mixed convection; (4) buoyancy-opposed mixed convection. Overall, good agreement is found for both forced convection-dominated scenarios, but an overly-diffusive prediction of the normal Reynolds stress is observed for the RANS-based turbulence models. Low-Reynolds number RANS models perform adequately for mixed convection, while higher-order RANS approaches underestimate the influence of buoyancy on the production of turbulence.

Ecological significance of residual exposures and effects from the Exxon Valdez oil spill.

PubMed

Harwell, Mark A; Gentile, John H

2006-07-01

An ecological significance framework is used to assess the ecological condition of Prince William Sound (PWS), Alaska, USA, in order to address the current management question: 17 y following the Exxon Valdez oil spill (EVOS), are there any remaining and continuing ecologically significant exposures or effects on the PWS ecosystem caused by EVOS? We examined the extensive scientific literature funded by the Exxon Valdez Trustees or by ExxonMobil to assess exposures and effects from EVOS. Criteria to assess ecological significance include whether a change in a valued ecosystem component (VEC) is sufficient to affect the structure, function, and/or health of the system and whether such a change exceeds natural variability. The EVOS occurred on 24 March 1989, releasing over 250,000 barrels of crude oil into PWS. Because PWS is highly dynamic, the residual oil was largely eliminated in the first few years, and now only widely dispersed, highly weathered, or isolated small pockets of residual contamination remain. Many other sources of polycyclic aromatic hydrocarbons (PAHs) exist in PWS from past or present human activities or natural oil seeps. Multiple-lines-of-evidence analyses indicate that residual PAHs from EVOS no longer represent an ecologically significant exposure risk to PWS. To assess the ecological significance of any residual effects from EVOS, we examined the literature on more than 20 VECs, including primary producers, filter feeders, fish and bird primary consumers, fish and bird top predators, a bird scavenger, mammalian primary consumers and top predators, biotic communities, ecosystem-level properties of trophodynamics and biogeochemical processes, and landscape-level properties of habitat mosaic and wilderness quality. None of these has any ecologically significant effects that are detectable at present, with the exception of 1 pod of orcas and possibly 1 subpopulation of sea otters; however, in both those cases, PWS-wide populations appear to have

Population, reproduction and foraging of pigeon guillemots at Naked Island, Alaska, before and after the Exxon Valdez oil spill. Bird study number 9. Exxon Valdez oil spill state/federal natural resource damage assessment final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Oakley, K.L.; Kuletz, K.J.

1994-01-01

Following the 1989 Exxon Valdez oil spill in Prince William Sound (PWS), Alaska, we studied pigeon guillemots (Cepphus columba) breeding just 30 km from the grounding site. The post-spill population was 43% less than the pre-spill population, but we could not attribute the entire decline to the spill because a decline in the PWS guillemot population may have predated the spill. However, relative declines in the population were greater along oiled shorelines, suggesting that the spill was responsible for some of the decline. The most likely explanation for the few effects observed is that oil was present on the surfacemore » waters of the study area for a relatively short period before the guillemots returned to begin their annual reproductive activities.« less

Multifractal Characteristics of Axisymmetric Jet Turbulence Intensity from Rans Numerical Simulation

NASA Astrophysics Data System (ADS)

Seo, Yongwon; Ko, Haeng Sik; Son, Sangyoung

A turbulent jet bears diverse physical characteristics that have been unveiled yet. Of particular interest is to analyze the turbulent intensity, which has been a key factor to assess and determine turbulent jet performance since diffusive and mixing conditions are largely dependent on it. Multifractal measures are useful in terms of identifying characteristics of a physical quantity distributed over a spatial domain. This study examines the multifractal exponents of jet turbulence intensities obtained through numerical simulation. We acquired the turbulence intensities from numerical jet discharge experiments, where two types of nozzle geometry were tested based on a Reynolds-Averaged Navier-Stokes (RANS) equations. The k-𝜀 model and k-ω model were used for turbulence closure models. The results showed that the RANS model successfully regenerates transversal velocity profile, which is almost identical to an analytical solution. The RANS model also shows the decay of turbulence intensity in the longitudinal direction but it depends on the outfall nozzle lengths. The result indicates the existence of a common multifractal spectrum for turbulence intensity obtained from numerical simulation. Although the transverse velocity profiles are similar for two different turbulence models, the minimum Lipschitz-Hölder exponent (αmin) and entropy dimension (α1) are different. These results suggest that the multifractal exponents capture the difference in turbulence structures of hierarchical turbulence intensities produced by different turbulence models.

In situ SUMOylation analysis reveals a modulatory role of RanBP2 in the nuclear rim and PML bodies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Saitoh, Noriko; Uchimura, Yasuhiro; The 21st Century Center of Excellence, Kumamoto University, 2-2-1 Honjo, Kumamoto 860-0811

2006-05-01

SUMO modification plays a critical role in a number of cellular functions including nucleocytoplasmic transport, gene expression, cell cycle and formation of subnuclear structures such as promyelocytic leukemia (PML) bodies. In order to identify the sites where SUMOylation takes place in the cell, we developed an in situ SUMOylation assay using a semi-intact cell system and subsequently combined it with siRNA-based knockdown of nucleoporin RanBP2, also known as Nup358, which is one of the known SUMO E3 proteins. With the in situ SUMOylation assay, we found that both nuclear rim and PML bodies, besides mitotic apparatuses, are major targets formore » active SUMOylation. The ability to analyze possible SUMO conjugation sites would be a valuable tool to investigate where SUMO E3-like activities and/or SUMO substrates exist in the cell. Specific knockdown of RanBP2 completely abolished SUMOylation along the nuclear rim and dislocated RanGAP1 from the nuclear pore complexes. Interestingly, the loss of RanBP2 markedly reduced the number of PML bodies, in contrast to other, normal-appearing nuclear compartments including the nuclear lamina, nucleolus and chromatin, suggesting a novel link between RanBP2 and PML bodies. SUMOylation facilitated by RanBP2 at the nuclear rim may be a key step for the formation of a particular subnuclear organization. Our data imply that SUMO E3 proteins like RanBP2 facilitate spatio-temporal SUMOylation for certain nuclear structure and function.« less

Aggregation-prone c9FTD/ALS poly(GA) RAN-translated proteins cause neurotoxicity by inducing ER stress.

PubMed

Zhang, Yong-Jie; Jansen-West, Karen; Xu, Ya-Fei; Gendron, Tania F; Bieniek, Kevin F; Lin, Wen-Lang; Sasaguri, Hiroki; Caulfield, Thomas; Hubbard, Jaime; Daughrity, Lillian; Chew, Jeannie; Belzil, Veronique V; Prudencio, Mercedes; Stankowski, Jeannette N; Castanedes-Casey, Monica; Whitelaw, Ena; Ash, Peter E A; DeTure, Michael; Rademakers, Rosa; Boylan, Kevin B; Dickson, Dennis W; Petrucelli, Leonard

2014-10-01

The occurrence of repeat-associated non-ATG (RAN) translation, an atypical form of translation of expanded repeats that results in the synthesis of homopolymeric expansion proteins, is becoming more widely appreciated among microsatellite expansion disorders. Such disorders include amyotrophic lateral sclerosis and frontotemporal dementia caused by a hexanucleotide repeat expansion in the C9ORF72 gene (c9FTD/ALS). We and others have recently shown that this bidirectionally transcribed repeat is RAN translated, and the "c9RAN proteins" thusly produced form neuronal inclusions throughout the central nervous system of c9FTD/ALS patients. Nonetheless, the potential contribution of c9RAN proteins to disease pathogenesis remains poorly understood. In the present study, we demonstrate that poly(GA) c9RAN proteins are neurotoxic and may be implicated in the neurodegenerative processes of c9FTD/ALS. Specifically, we show that expression of poly(GA) proteins in cultured cells and primary neurons leads to the formation of soluble and insoluble high molecular weight species, as well as inclusions composed of filaments similar to those observed in c9FTD/ALS brain tissues. The expression of poly(GA) proteins is accompanied by caspase-3 activation, impaired neurite outgrowth, inhibition of proteasome activity, and evidence of endoplasmic reticulum (ER) stress. Of importance, ER stress inhibitors, salubrinal and TUDCA, provide protection against poly(GA)-induced toxicity. Taken together, our data provide compelling evidence towards establishing RAN translation as a pathogenic mechanism of c9FTD/ALS, and suggest that targeting the ER using small molecules may be a promising therapeutic approach for these devastating diseases.

A Coast Mountains provenance for the Valdez and Orca groups, southern Alaska, based on Nd, Sr, and Pb isotopic evidence

USGS Publications Warehouse

Farmer, G.L.; Ayuso, R.; Plafker, G.

1993-01-01

Nd, Sr, and Pb isotopic data were obtained for fourteen fine- to coarse-grained samples of accreted flysch of the Late Cretaceous and early Tertiary Valdez and Orca Groups in southern Alaska to determine the flysch provenance. Argillites and greywackes from the Orca Group, as well as compositionally similar but higher metamorphic grade rocks from the Valdez Group, show a restricted range of correlated ??{lunate}Nd ( -0.6 to -3.8) and 87Sr 86Sr (0.7060-0.7080) at the time of sediment deposition ( ??? 50 Ma). Pb isotopic compositions also vary over a narrow range ( 206Pb 204Pb = 19.138-19.395, 207Pb 204Pb = 15.593-15.703, 208Pb 204Pb = 38.677-39.209), and in the Orca Group the samples generally become more radiogenic with decreasing ??{lunate}Nd and increasing 87Sr 86Sr. All samples have similar trace element compositions characterized by moderate light rare earth element enrichments, and low ratios of high field strength elements to large ion lithophile elements. Based on petrographic, geochemical, and isotopic data the sedimentary rocks are interpreted to have been derived largely from a Phanerozoic continental margin arc complex characterized by igneous rocks with ??{lunate}Nd values between 0 and -5. The latter conclusion is supported by the ??{lunate}Nd values of a tonalite clast and a rhyodacite clast in the Orca Group (??{lunate}Nd = -4.9 and -0.9, respectively). However, trondjemitic clasts in the Orca Group have significantly lower ??{lunate}Nd ( ??? -10) and require a derivation of a portion of the flysch from Precambrian crustal sources. The Nd, Sr, and Pb isotopic compositions of both the Valdez and Orca Groups overlap the values determined for intrusive igneous rocks exposed within the northern portion of the Late Cretaceous to early Tertiary Coast Mountains Plutonic Complex in western British Columbia and equivalent rocks in southeastern Alaska. The isotopic data support previous conclusions based on geologic studies which suggest that the flysch was

Counting and RAN: Predictors of Arithmetic Calculation and Reading Fluency

ERIC Educational Resources Information Center

Koponen, Tuire; Salmi, Paula; Eklund, Kenneth; Aro, Tuija

2013-01-01

This study examined whether counting and rapid automatized naming (RAN) could operate as significant predictors of both later arithmetic calculation and reading fluency. The authors also took an important step to clarify the cognitive mechanisms underlying these predictive relationships by controlling for the effect of phonological awareness and…

Advanced Signal Processing for Integrated LES-RANS Simulations: Anti-aliasing Filters

NASA Technical Reports Server (NTRS)

Schlueter, J. U.

2003-01-01

Currently, a wide variety of flow phenomena are addressed with numerical simulations. Many flow solvers are optimized to simulate a limited spectrum of flow effects effectively, such as single parts of a flow system, but are either inadequate or too expensive to be applied to a very complex problem. As an example, the flow through a gas turbine can be considered. In the compressor and the turbine section, the flow solver has to be able to handle the moving blades, model the wall turbulence, and predict the pressure and density distribution properly. This can be done by a flow solver based on the Reynolds-Averaged Navier-Stokes (RANS) approach. On the other hand, the flow in the combustion chamber is governed by large scale turbulence, chemical reactions, and the presence of fuel spray. Experience shows that these phenomena require an unsteady approach. Hence, for the combustor, the use of a Large Eddy Simulation (LES) flow solver is desirable. While many design problems of a single flow passage can be addressed by separate computations, only the simultaneous computation of all parts can guarantee the proper prediction of multi-component phenomena, such as compressor/combustor instability and combustor/turbine hot-streak migration. Therefore, a promising strategy to perform full aero-thermal simulations of gas-turbine engines is the use of a RANS flow solver for the compressor sections, an LES flow solver for the combustor, and again a RANS flow solver for the turbine section.

Integral Method for the Assessment of U-RANS Effectiveness in Non-Equilibrium Flows and Heat Transfer

NASA Astrophysics Data System (ADS)

Pond, Ian; Edabi, Alireza; Dubief, Yves; White, Christopher

2015-11-01

Reynolds Average Navier Stokes (RANS) modeling has established itself as a critical design tool in many engineering applications, thanks to its superior computational efficiency. The drawbacks of RANS models are well known, but not necessarily well understood: poor prediction of transition, non equilibrium flows, mixing and heat transfer, to name the ones relevant to our study. In the present study, we use a DNS of a reciprocating channel flow driven by an oscillating pressure gradient to test several low- and high-Reynolds RANS models. Temperature is introduced as a passive scalar to study heat transfer modeling. Low-Reynolds models manage to capture the overall physics of wall shear and heat flux well, yet with some phase discrepancies, whereas high Reynolds models fail. Under the microscope of the integral method for wall shear and wall heat flux, the qualitative agreement appears more serendipitous than driven by the ability of the models to capture the correct physics. The integral method is shown to be more insightful in the benchmarking of RANS models than the typical comparisons of statistical quantities. The authors acknowledges the support of NSF and DOE under grant NSF/DOE 1258697 (VT) and 1258702 (NH).

Sediment environment of Port Valdez, Alaska: the effect of oil on this ecosystem

DOE Office of Scientific and Technical Information (OSTI.GOV)

Feder, H.M.; Cheek, M.; Flanagan, P.

1976-07-01

The Port Valdez intertidal sediment system was studied for three years. Physical, geological, geochemical, hydrocarbon, and biological features were examined. Sediments were poorly sorted gravels to plastic clays, and had low amounts of organic matter. Bacterial numbers varied from site to site, and decreased in numbers with depth. Meiofauna consisted primarily of nematodes and harpacticoid copepods. Most meiofaunal species were restricted to the upper three centimeters throughout the year. Meiofaunal densities wre typically highest in summer and lowest in winter. Reproductive activities of copepods tended to be seasonal with only one species reproducing throughout the year. Bacterial populations were unaffectedmore » by single applications. It is concluded that oil is removed rapidly by tidal action. Three species of copepods exposed to oil in the field significantly increased in density in experimentally oiled plots. Uptake and release of added oil by intertidal sediments and the clam (Macoma balthica) were examined in the field. Petroleum was not detectable two months after application to sediments.« less

Fluid flow analysis behind heliostat using LES and RANS: A step towards optimized field design in desert regions

NASA Astrophysics Data System (ADS)

Boddupalli, Nibodh; Goenka, Vikash; Chandra, Laltu

2017-06-01

Heliostats are used for concentrating beam radiation onto a receiver. The flow induced dust deposition on these reflectors will lead to failure of the receiver. For this purpose, the wake behind a heliostat is analyzed at 25° of inclination and at a Reynolds number of 60000. In this paper the Reynolds Averaged Navier-Stokes (RANS) and the Large Eddy Simulation (LES) approaches are used for analyzing the air-flow behind a heliostat. LES and RANS are performed with a wall-resolved grid. For the purpose of validation, the horizontal velocity is measured in a wind-tunnel with a model heliostat using laser Doppler velocimetry technique. RANS and LES approaches are found to qualitatively predict the statistical quantities, like the mean horizontal-velocity in comparison to experiment. RANS under-predicts root-mean-square of the horizontal-velocity and even failed to capture the flow features behind heliostat. Thus, it is concluded that RANS will suffice with well-resolved grid for analyzing mean flow features. For analyzing wake and to understand the induced dust deposition LES is required. Further, the analysis reveals that the wake-affected region is up to three times the length of the heliostat's mirror. This can be recommended as the minimum distance between any two aligned heliostats in Jodhpur.

A Novel In Vivo Assay Reveals Inhibition of Ribosomal Nuclear Export in Ran-Cycle and Nucleoporin Mutants

PubMed Central

Hurt, Ed; Hannus, Stefan; Schmelzl, Birgit; Lau, Denise; Tollervey, David; Simos, George

1999-01-01

To identify components involved in the nuclear export of ribosomes in yeast, we developed an in vivo assay exploiting a green fluorescent protein (GFP)-tagged version of ribosomal protein L25. After its import into the nucleolus, L25-GFP assembles with 60S ribosomal subunits that are subsequently exported into the cytoplasm. In wild-type cells, GFP-labeled ribosomes are only detected by fluorescence in the cytoplasm. However, thermosensitive rna1-1 (Ran-GAP), prp20-1 (Ran-GEF), and nucleoporin nup49 and nsp1 mutants are impaired in ribosomal export as revealed by nuclear accumulation of L25-GFP. Furthermore, overexpression of dominant-negative RanGTP (Gsp1-G21V) and the tRNA exportin Los1p inhibits ribosomal export. The pattern of subnuclear accumulation of L25-GFP observed in different mutants is not identical, suggesting that transport can be blocked at different steps. Thus, nuclear export of ribosomes requires the nuclear/cytoplasmic Ran-cycle and distinct nucleoporins. This assay can be used to identify soluble transport factors required for nuclear exit of ribosomes. PMID:9971735

Francis-99 turbine numerical flow simulation of steady state operation using RANS and RANS/LES turbulence model

NASA Astrophysics Data System (ADS)

Minakov, A.; Platonov, D.; Sentyabov, A.; Gavrilov, A.

2017-01-01

We performed numerical simulation of flow in a laboratory model of a Francis hydroturbine at three regimes, using two eddy-viscosity- (EVM) and a Reynolds stress (RSM) RANS models (realizable k-ɛ, k-ω SST, LRR) and detached-eddy-simulations (DES), as well as large-eddy simulations (LES). Comparison of calculation results with the experimental data was carried out. Unlike the linear EVMs, the RSM, DES, and LES reproduced well the mean velocity components, and pressure pulsations in the diffusor draft tube. Despite relatively coarse meshes and insufficient resolution of the near-wall region, LES, DES also reproduced well the intrinsic flow unsteadiness and the dominant flow structures and the associated pressure pulsations in the draft tube.

A Meta-Analysis of the Relation between RAN and Mathematics

ERIC Educational Resources Information Center

Koponen, Tuire; Georgiou, George; Salmi, Paula; Leskinen, Markku; Aro, Mikko

2017-01-01

Several studies have shown that rapid automatized naming (RAN) is a significant predictor of mathematics, but the nature of their relationship remains elusive. Thus, the purpose of this meta-analysis was to estimate the size of their relationship and determine the conditions under which they correlate. We used a random-effects model analysis of…

Sumoylation in p27kip1 via RanBP2 promotes cancer cell growth in cholangiocarcinoma cell line QBC939.

PubMed

Yang, Jun; Liu, Yan; Wang, Bing; Lan, Hongzhen; Liu, Ying; Chen, Fei; Zhang, Ju; Luo, Jian

2017-09-07

Cholangiocarcinoma is one of the deadly disease with poor 5-year survival and poor response to conventional therapies. Previously, we found that p27kip1 nuclear-cytoplasmic translocation confers proliferation potential to cholangiocarcinoma cell line QBC939 and this process is mediated by crm-1. However, no other post-transcriptional regulation was found in this process including sumoylation in cholangiocarcinoma. In this study, we explored the role of sumoylation in the nuclear-cytoplasmic translocation of p27kip1 and its involvement of QBC939 cells' proliferation. First, we identified K73 as the sumoylation site in p27kip1. By utilizing plasmid flag-p27kip1, HA-RanBP2, GST-RanBP2 and His-p27kip1 and immunoprecipitation assay, we validated that p27kip1 can serve as the sumoylation target of RanBP2 in QBC939. Furthermore, we confirmed crm-1's role in promoting nuclear-cytoplasmic translocation of p27kip1 and found that RanBP2's function relies on crm-1. However, K73R mutated p27kip1 can't be identified by crm-1 or RanBP2 in p27kip1 translocation process, suggesting sumoylation of p27kip1 via K73 site is necessary in this process by RanBP2 and crm-1. Phenotypically, the overexpression of either RanBP2 or crm-1 can partially rescue the anti-proliferative effect brought by p27kip1 overexpression in both the MTS and EdU assay. For the first time, we identified and validated the K73 sumoylation site in p27kip1, which is critical to RanBP2 and crm-1 in p27kip1 nuclear-cytoplasmic translocation process. Taken together, targeted inhibition of sumoylation of p27kip1 may serve as a potentially potent therapeutic target in the eradication of cholangiocarcinoma development and relapses.

Accurate load prediction by BEM with airfoil data from 3D RANS simulations

NASA Astrophysics Data System (ADS)

Schneider, Marc S.; Nitzsche, Jens; Hennings, Holger

2016-09-01

In this paper, two methods for the extraction of airfoil coefficients from 3D CFD simulations of a wind turbine rotor are investigated, and these coefficients are used to improve the load prediction of a BEM code. The coefficients are extracted from a number of steady RANS simulations, using either averaging of velocities in annular sections, or an inverse BEM approach for determination of the induction factors in the rotor plane. It is shown that these 3D rotor polars are able to capture the rotational augmentation at the inner part of the blade as well as the load reduction by 3D effects close to the blade tip. They are used as input to a simple BEM code and the results of this BEM with 3D rotor polars are compared to the predictions of BEM with 2D airfoil coefficients plus common empirical corrections for stall delay and tip loss. While BEM with 2D airfoil coefficients produces a very different radial distribution of loads than the RANS simulation, the BEM with 3D rotor polars manages to reproduce the loads from RANS very accurately for a variety of load cases, as long as the blade pitch angle is not too different from the cases from which the polars were extracted.

GTPase Ran strongly accumulates at the kinetochores of somatic chromosomes in the spermatogonial mitoses of Acricotopus lucidus (Diptera, Chironomidae).

PubMed

Staiber, Wolfgang

2014-07-01

Unequal chromosome segregation and spindle formation occurs in the last gonial mitosis in the germ line of the chironomid Acricotopus lucidus. During this differential mitosis, all germ line-limited chromosomes (=Ks) migrate undivided to only one pole of the cell, while the somatic chromosomes (=Ss) first remain in the metaphase plane, and with the arrival of the Ks at the pole, they then separate equally. The evolutionarily conserved GTPase Ran plays a crucial role in many cellular processes. This includes the regulation of microtubule nucleation and stabilisation at kinetochores and of spindle assembly during mitosis, which is promoted by a RanGTP concentration gradient that forms around the mitotic chromosomes (Kalab et al. in Science 295:2452-2456, 2002, Nature 440:697-701, 2006). In the present study, a strong accumulation of Ran was detected by immunofluorescence at the kinetochores of the Ss in normal gonial and differential gonial mitoses of males of A. lucidus. In contrast, no Ran accumulation was observed at the kinetochores of the Ss in the metaphases of brain ganglia mitoses or of aberrant spermatocytes or in metaphases I and II of spermatocyte meiotic divisions. Likewise, there was no accumulation at the kinetochores of Drosophila melanogaster mitotic chromosomes from larval brains. The specific accumulation of Ran at the kinetochores of the Ss in differential gonial mitoses of A. lucidus strongly suggests that Ran is involved in a mechanism acting in this exceptional mitosis, which retains the Ss at the metaphase plane and prevents a premature separation and unequal segregation of the Ss during monopolar migration of the Ks.

A strong loss-of-function mutation in RAN1 results in constitutive activation of the ethylene response pathway as well as a rosette-lethal phenotype

NASA Technical Reports Server (NTRS)

Woeste, K. E.; Kieber, J. J.; Evans, M. L. (Principal Investigator)

2000-01-01

A recessive mutation was identified that constitutively activated the ethylene response pathway in Arabidopsis and resulted in a rosette-lethal phenotype. Positional cloning of the gene corresponding to this mutation revealed that it was allelic to responsive to antagonist1 (ran1), a mutation that causes seedlings to respond in a positive manner to what is normally a competitive inhibitor of ethylene binding. In contrast to the previously identified ran1-1 and ran1-2 alleles that are morphologically indistinguishable from wild-type plants, this ran1-3 allele results in a rosette-lethal phenotype. The predicted protein encoded by the RAN1 gene is similar to the Wilson and Menkes disease proteins and yeast Ccc2 protein, which are integral membrane cation-transporting P-type ATPases involved in copper trafficking. Genetic epistasis analysis indicated that RAN1 acts upstream of mutations in the ethylene receptor gene family. However, the rosette-lethal phenotype of ran1-3 was not suppressed by ethylene-insensitive mutants, suggesting that this mutation also affects a non-ethylene-dependent pathway regulating cell expansion. The phenotype of ran1-3 mutants is similar to loss-of-function ethylene receptor mutants, suggesting that RAN1 may be required to form functional ethylene receptors. Furthermore, these results suggest that copper is required not only for ethylene binding but also for the signaling function of the ethylene receptors.

Mechanistic Insights from Structural Analyses of Ran-GTPase-Driven Nuclear Export of Proteins and RNAs.

PubMed

Matsuura, Yoshiyuki

2016-05-22

Understanding how macromolecules are rapidly exchanged between the nucleus and the cytoplasm through nuclear pore complexes is a fundamental problem in biology. Exportins are Ran-GTPase-dependent nuclear transport factors that belong to the karyopherin-β family and mediate nuclear export of a plethora of proteins and RNAs, except for bulk mRNA nuclear export. Exportins bind cargo macromolecules in a Ran-GTP-dependent manner in the nucleus, forming exportin-cargo-Ran-GTP complexes (nuclear export complexes). Transient weak interactions between exportins and nucleoporins containing characteristic FG (phenylalanine-glycine) repeat motifs facilitate nuclear pore complex passage of nuclear export complexes. In the cytoplasm, nuclear export complexes are disassembled, thereby releasing the cargo. GTP hydrolysis by Ran promoted in the cytoplasm makes the disassembly reaction virtually irreversible and provides thermodynamic driving force for the overall export reaction. In the past decade, X-ray crystallography of some of the exportins in various functional states coupled with functional analyses, single-particle electron microscopy, molecular dynamics simulations, and small-angle solution X-ray scattering has provided rich insights into the mechanism of cargo binding and release and also begins to elucidate how exportins interact with the FG repeat motifs. The knowledge gained from structural analyses of nuclear export is being translated into development of clinically useful inhibitors of nuclear export to treat human diseases such as cancer and influenza. Copyright © 2015 Elsevier Ltd. All rights reserved.

Exxon Valdez oil spill: State/federal natural resource damage assessment final report. Effects of pink salmon (oncorhynchus gorbuscha) escapement level on egg retention, preemergent fry, and adult returns to the kodiak and chignik management areas caused by the Exxon Valdez oil spill. Fish/shellfish study numbers 7b and 8b. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1993-12-01

As a result of the 1989 Exxon Valdez oil spill, commercial salmon fishing in and around the Kodiak and Chignik areas was severely restricted throughout the 1989 season. Consequently, pink salmon escapements for these areas greatly exceeded targeted escapement objectives. Investigations were conducted within the Kodiak and Chignik Management Areas during 1989 and 1990 to determine if negative impacts on future odd-year brood line pink salmon production occurred as a result of overescapement in 1989.

Aerodynamic optimization of aircraft wings using a coupled VLM-2.5D RANS approach

NASA Astrophysics Data System (ADS)

Parenteau, Matthieu

The design process of transonic civil aircraft is complex and requires strong governance to manage the various program development phases. There is a need in the community to have numerical models in all disciplines that span the conceptual, preliminary and detail design phases in a seamless fashion so that choices made in each phase remain consistent with each other. The objective of this work is to develop an aerodynamic model suitable for conceptual multidisciplinary design optimization with low computational cost and sufficient fidelity to explore a large design space in the transonic and high-lift regimes. The physics-based reduce order model is based on the inviscid Vortex Lattice Method (VLM), selected for its low computation time. Viscous effects are modeled with two-dimensional high-fidelity RANS calculations at various sections along the span and incorporated as an angle of attack correction inside the VLM. The viscous sectional data are calculated with infinite swept wing conditions to allow viscous crossflow effects to be included for a more accurate maximum lift coefficient and spanload evaluations. These viscous corrections are coupled through a modified alpha coupling method for 2.5D RANS sectional data, stabilized in the post-stall region with artificial dissipation. The fidelity of the method is verified against 3D RANS flow solver solutions on the Bombardier Research Wing (BRW). Clean and high-lift configurations are investigated. The overall results show impressive precision of the VLM/2.5D RANS approach compared to 3D RANS solutions and in compute times in the order of seconds on a standard desktop computer. Finally, the aerodynamic solver is implemented in an optimization framework with a Covariant Matrix Adaptation Evolution Strategy (CMA-ES) optimizer to explore the design space of aerodynamic wing planform. Single-objective low-speed and high-speed optimizations are performed along with composite-objective functions for combined low

Western Culture in Japanese Film: Kurosawa's "Throne of Blood" and "Ran."

ERIC Educational Resources Information Center

Kane, Peter E.

Akira Kurosawa, the most popular Asian film maker with audiences in the United States, has found in William Shakespeare's plays themes and plots that resonate within Japanese culture. While the translations of "Macbeth" into "Throne of Blood" and "King Lear" into "Ran" are quite direct and literal with only…

A Strong Loss-of-Function Mutation in RAN1 Results in Constitutive Activation of the Ethylene Response Pathway as Well as a Rosette-Lethal Phenotype

PubMed Central

Woeste, Keith E.; Kieber, Joseph J.

2000-01-01

A recessive mutation was identified that constitutively activated the ethylene response pathway in Arabidopsis and resulted in a rosette-lethal phenotype. Positional cloning of the gene corresponding to this mutation revealed that it was allelic to responsive to antagonist1 (ran1), a mutation that causes seedlings to respond in a positive manner to what is normally a competitive inhibitor of ethylene binding. In contrast to the previously identified ran1-1 and ran1-2 alleles that are morphologically indistinguishable from wild-type plants, this ran1-3 allele results in a rosette-lethal phenotype. The predicted protein encoded by the RAN1 gene is similar to the Wilson and Menkes disease proteins and yeast Ccc2 protein, which are integral membrane cation-transporting P-type ATPases involved in copper trafficking. Genetic epistasis analysis indicated that RAN1 acts upstream of mutations in the ethylene receptor gene family. However, the rosette-lethal phenotype of ran1-3 was not suppressed by ethylene-insensitive mutants, suggesting that this mutation also affects a non-ethylene-dependent pathway regulating cell expansion. The phenotype of ran1-3 mutants is similar to loss-of-function ethylene receptor mutants, suggesting that RAN1 may be required to form functional ethylene receptors. Furthermore, these results suggest that copper is required not only for ethylene binding but also for the signaling function of the ethylene receptors. PMID:10715329

Unsteady Three-Dimensional Simulation of a Shear Coaxial GO2/GH2 Rocket Injector with RANS and Hybrid-RAN-LES/DES Using Flamelet Models

NASA Technical Reports Server (NTRS)

Westra, Doug G.; West, Jeffrey S.; Richardson, Brian R.

2015-01-01

Historically, the analysis and design of liquid rocket engines (LREs) has relied on full-scale testing and one-dimensional empirical tools. The testing is extremely expensive and the one-dimensional tools are not designed to capture the highly complex, and multi-dimensional features that are inherent to LREs. Recent advances in computational fluid dynamics (CFD) tools have made it possible to predict liquid rocket engine performance, stability, to assess the effect of complex flow features, and to evaluate injector-driven thermal environments, to mitigate the cost of testing. Extensive efforts to verify and validate these CFD tools have been conducted, to provide confidence for using them during the design cycle. Previous validation efforts have documented comparisons of predicted heat flux thermal environments with test data for a single element gaseous oxygen (GO2) and gaseous hydrogen (GH2) injector. The most notable validation effort was a comprehensive validation effort conducted by Tucker et al. [1], in which a number of different groups modeled a GO2/GH2 single element configuration by Pal et al [2]. The tools used for this validation comparison employed a range of algorithms, from both steady and unsteady Reynolds Averaged Navier-Stokes (U/RANS) calculations, large-eddy simulations (LES), detached eddy simulations (DES), and various combinations. A more recent effort by Thakur et al. [3] focused on using a state-of-the-art CFD simulation tool, Loci/STREAM, on a two-dimensional grid. Loci/STREAM was chosen because it has a unique, very efficient flamelet parameterization of combustion reactions that are too computationally expensive to simulate with conventional finite-rate chemistry calculations. The current effort focuses on further advancement of validation efforts, again using the Loci/STREAM tool with the flamelet parameterization, but this time with a three-dimensional grid. Comparisons to the Pal et al. heat flux data will be made for both RANS and

A gene delivery system containing nuclear localization signal: Increased nucleus import and transfection efficiency with the assistance of RanGAP1.

PubMed

Chen, Kang; Guo, Lingling; Zhang, Jiulong; Chen, Qing; Wang, Kuanglei; Li, Chenxi; Li, Weinan; Qiao, Mingxi; Zhao, Xiuli; Hu, Haiyang; Chen, Dawei

2017-01-15

In the present report, a degradable gene delivery system (PAMS/DNA/10NLS) containing nucleus location signal peptide (NLS) was prepared. The agarose gel electrophoresis, particle size and zeta potential of PAMS/DNA/10NLS were similar to those of PAMS/DNA, which proved that NLS did not affect the interaction between PAMS and DNA. PAMS/DNA/10NLS exhibited marked extracellular and intracellular degradation under acidic conditions. The degradation was believed to allow NLS to come into contact with importins easily, which was able to mediate the nucleus import. With the help of NLS, PAMS/DNA/10NLS exhibited a higher transfection capability than PAMS/DNA. Moreover, the transfection of PAMS/DNA/10NLS was less dependent on the breakdown of the nucleus envelope than PAMS/DNA. Considering that GTPase-activating protein 1 (RanGAP1) was able to activate the endogenous GTPase, which was necessary for NLS-mediated nucleus import, RanGAP1 overexpressed cells (RanGAP1 cells) were produced. This result showed that RanGAP1 cells had higher GTPase activities than normal cells. Both the nucleus import and transfection efficiency of PAMS/DNA/10NLS were markedly higher in RanGAP1 cells than that in normal cells. The in vivo transfection results also showed that the transfection efficiency of PAMS/DNA/10NLS was higher in RanGAP1 pre-treated mice than that in normal mice. These findings showed that PAMS/DNA/10NLS is a promising gene delivery system with the assistance of RanGAP1. The present report describes the increased transfection efficiency of a degradable gene delivery system (PAMS/DNA/10NLS) containing nuclear location signal (NLS) with the assistance of GTPase-activating protein 1 (RanGAP1). The physicochemical properties of PAMS/DNA/10NLS were similar to those of PAMS/DNA. PAMS/DNA/10NLS exhibited great extracellular and intracellular degradations, which might allow NLS to contact with importins easily. With the help of NLS, PAMS/DNA/10NLS exhibited a higher transfection

COPS5 (Jab1) protein increases β site processing of amyloid precursor protein and amyloid β peptide generation by stabilizing RanBP9 protein levels.

PubMed

Wang, Hongjie; Dey, Debleena; Carrera, Ivan; Minond, Dmitriy; Bianchi, Elisabetta; Xu, Shaohua; Lakshmana, Madepalli K

2013-09-13

Increased processing of amyloid precursor protein (APP) and accumulation of neurotoxic amyloid β peptide (Aβ) in the brain is central to the pathogenesis of Alzheimer's disease (AD). Therefore, the identification of molecules that regulate Aβ generation is crucial for future therapeutic approaches for AD. We demonstrated previously that RanBP9 regulates Aβ generation in a number of cell lines and primary neuronal cultures by forming tripartite protein complexes with APP, low-density lipoprotein-related protein, and BACE1, consequently leading to increased amyloid plaque burden in the brain. RanBP9 is a scaffold protein that exists and functions in multiprotein complexes. To identify other proteins that may bind RanBP9 and regulate Aβ levels, we used a two-hybrid analysis against a human brain cDNA library and identified COPS5 as a novel RanBP9-interacting protein. This interaction was confirmed by coimmunoprecipitation experiments in both neuronal and non-neuronal cells and mouse brain. Colocalization of COPS5 and RanBP9 in the same subcellular compartments further supported the interaction of both proteins. Furthermore, like RanBP9, COPS5 robustly increased Aβ generation, followed by increased soluble APP-β (sAPP-β) and decreased soluble-APP-α (sAPP-α) levels. Most importantly, down-regulation of COPS5 by siRNAs reduced Aβ generation, implying that endogenous COPS5 regulates Aβ generation. Finally, COPS5 levels were increased significantly in AD brains and APΔE9 transgenic mice, and overexpression of COPS5 strongly increased RanBP9 protein levels by increasing its half-life. Taken together, these results suggest that COPS5 increases Aβ generation by increasing RanBP9 levels. Thus, COPS5 is a novel RanBP9-binding protein that increases APP processing and Aβ generation by stabilizing RanBP9 protein levels.

RANS simulations of wind turbine wakes: optimal tuning of turbulence closure and aerodynamic loads from LiDAR and SCADA data

NASA Astrophysics Data System (ADS)

Letizia, Stefano; Puccioni, Matteo; Zhan, Lu; Viola, Francesco; Camarri, Simone; Iungo, Giacomo Valerio

2017-11-01

Numerical simulations of wakes produced by utility-scale wind turbines still present challenges related to the variability of the atmospheric conditions and, in the most of the cases, the lack of information about the geometry and aerodynamic performance of the wind turbine blades. In order to overcome the mentioned difficulties, we propose a RANS solver for which turbine aerodynamic forcing and turbulence closure are calibrated through LiDAR and SCADA data acquired for an onshore wind farm. The wind farm under examination is located in North Texas over a relatively flat terrain. The experimental data are leveraged to maximize accuracy of the RANS predictions in terms of wake velocity field and power capture for different atmospheric stability conditions and settings of the wind turbines. The optimization of the RANS parameters is performed through an adjoint-RANS formulation and a gradient-based procedure. The optimally-tuned aerodynamic forcing and turbulence closure are then analyzed in order to investigate effects of the atmospheric stability on the evolution of wind turbine wakes and power performance. The proposed RANS solver has low computational costs comparable to those of wake engineering models, which make it a compelling tool for wind farm control and optimization. Acknowledgments: NSF I/UCRC WindSTAR IIP 1362033 and TACC.

Assessment of injury to river otters in Prince William Sound, Alaska, following the Exxon Valdez oil spill. Terrestrial mammal study number 3. Exxon Valdez oil spill state/federal natural resource damage assessment final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Faro, J.B.; Bowyer, R.T.; Testa, J.W.

1994-03-01

River otters (Lutra canadensis) were killed by direct effects of the Exxon Valdez oil spill, but the magnitude of that loss is unknown due to lack of pre-spill data. A time lag in spill effects is reflected by the reduction in species richness and diversity in the summer diets of otters in oiled areas between 1989 and 1990. Otters from oiled areas had higher haptoglobin levels in both 1990 and 1991. Male otters captured in oiled areas in 1990 had significantly lower body mass than otters from nonoiled areas. Otters from oiled areas had home ranges that were twice asmore » large as those from a non-spill area. Differences in rates of fecal deposition between oiled and nonoiled latrine sites in 1989 suggest otters used heavily oiled areas less often. Otters avoided shorelines with shallow slopes on the oiled area, whereas they strongly preferred these slopes on nonoiled sites, suggesting that otters lost habitat as a result of the spill.« less

Development of a Hybrid RANS/LES Method for Turbulent Mixing Layers

NASA Technical Reports Server (NTRS)

Georgiadis, Nicholas J.; Alexander, J. Iwan D.; Reshotko, Eli

2001-01-01

Significant research has been underway for several years in NASA Glenn Research Center's nozzle branch to develop advanced computational methods for simulating turbulent flows in exhaust nozzles. The primary efforts of this research have concentrated on improving our ability to calculate the turbulent mixing layers that dominate flows both in the exhaust systems of modern-day aircraft and in those of hypersonic vehicles under development. As part of these efforts, a hybrid numerical method was recently developed to simulate such turbulent mixing layers. The method developed here is intended for configurations in which a dominant structural feature provides an unsteady mechanism to drive the turbulent development in the mixing layer. Interest in Large Eddy Simulation (LES) methods have increased in recent years, but applying an LES method to calculate the wide range of turbulent scales from small eddies in the wall-bounded regions to large eddies in the mixing region is not yet possible with current computers. As a result, the hybrid method developed here uses a Reynolds-averaged Navier-Stokes (RANS) procedure to calculate wall-bounded regions entering a mixing section and uses a LES procedure to calculate the mixing-dominated regions. A numerical technique was developed to enable the use of the hybrid RANS-LES method on stretched, non-Cartesian grids. With this technique, closure for the RANS equations is obtained by using the Cebeci-Smith algebraic turbulence model in conjunction with the wall-function approach of Ota and Goldberg. The LES equations are closed using the Smagorinsky subgrid scale model. Although the function of the Cebeci-Smith model to replace all of the turbulent stresses is quite different from that of the Smagorinsky subgrid model, which only replaces the small subgrid turbulent stresses, both are eddy viscosity models and both are derived at least in part from mixing-length theory. The similar formulation of these two models enables the RANS

Antisense expression of an Arabidopsis ran binding protein renders transgenic roots hypersensitive to auxin and alters auxin-induced root growth and development by arresting mitotic progress

NASA Technical Reports Server (NTRS)

Kim, S. H.; Arnold, D.; Lloyd, A.; Roux, S. J.

2001-01-01

We cloned a cDNA encoding an Arabidopsis Ran binding protein, AtRanBP1c, and generated transgenic Arabidopsis expressing the antisense strand of the AtRanBP1c gene to understand the in vivo functions of the Ran/RanBP signal pathway. The transgenic plants showed enhanced primary root growth but suppressed growth of lateral roots. Auxin significantly increased lateral root initiation and inhibited primary root growth in the transformants at 10 pM, several orders of magnitude lower than required to induce these responses in wild-type roots. This induction was followed by a blockage of mitosis in both newly emerged lateral roots and in the primary root, ultimately resulting in the selective death of cells in the tips of both lateral and primary roots. Given the established role of Ran binding proteins in the transport of proteins into the nucleus, these findings are consistent with a model in which AtRanBP1c plays a key role in the nuclear delivery of proteins that suppress auxin action and that regulate mitotic progress in root tips.

The defective nuclear lamina in Hutchinson-gilford progeria syndrome disrupts the nucleocytoplasmic Ran gradient and inhibits nuclear localization of Ubc9.

PubMed

Kelley, Joshua B; Datta, Sutirtha; Snow, Chelsi J; Chatterjee, Mandovi; Ni, Li; Spencer, Adam; Yang, Chun-Song; Cubeñas-Potts, Caelin; Matunis, Michael J; Paschal, Bryce M

2011-08-01

The mutant form of lamin A responsible for the premature aging disease Hutchinson-Gilford progeria syndrome (termed progerin) acts as a dominant negative protein that changes the structure of the nuclear lamina. How the perturbation of the nuclear lamina in progeria is transduced into cellular changes is undefined. Using patient fibroblasts and a variety of cell-based assays, we determined that progerin expression in Hutchinson-Gilford progeria syndrome inhibits the nucleocytoplasmic transport of several factors with key roles in nuclear function. We found that progerin reduces the nuclear/cytoplasmic concentration of the Ran GTPase and inhibits the nuclear localization of Ubc9, the sole E2 for SUMOylation, and of TPR, the nucleoporin that forms the basket on the nuclear side of the nuclear pore complex. Forcing the nuclear localization of Ubc9 in progerin-expressing cells rescues the Ran gradient and TPR import, indicating that these pathways are linked. Reducing nuclear SUMOylation decreases the nuclear mobility of the Ran nucleotide exchange factor RCC1 in vivo, and the addition of SUMO E1 and E2 promotes the dissociation of RCC1 and Ran from chromatin in vitro. Our data suggest that the cellular effects of progerin are transduced, at least in part, through reduced function of the Ran GTPase and SUMOylation pathways.

Recovery monitoring of pigeon guillemot populations in Prince William Sound, Alaska. Restoration project 94173. Exxon Valdez oil spill restoration project final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hayes, D.L.

1995-05-01

The population of pigeon guillemots in Prince William Sound decreased from about 15,000 (1970`s) to about 5,000 (present). Some local populations were affected by the U/V Exxon Valdez oil spill in 1989, but there is evidence suggesting the Sound-wide population was already declining. Predation was the cause of numerous nesting failures. Abandonment of eggs was also high. Changes in the relative proportions of benthic and schooling fish in the diet of guillemot chicks might represent a key change in the ecosystem that is affecting other species of marine birds and mammals in the Sound.

Surface Mechanical and Rheological Behaviors of Biocompatible Poly((D,L-lactic acid-ran-glycolic acid)-block-ethylene glycol) (PLGA-PEG) and Poly((D,L-lactic acid-ran-glycolic acid-ran-ε-caprolactone)-block-ethylene glycol) (PLGACL-PEG) Block Copolymers at the Air-Water Interface

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, Hyun Chang; Lee, Hoyoung; Khetan, Jawahar

Air–water interfacial monolayers of poly((d,l-lactic acid-ran-glycolic acid)-block-ethylene glycol) (PLGA–PEG) exhibit an exponential increase in surface pressure under high monolayer compression. In order to understand the molecular origin of this behavior, a combined experimental and theoretical investigation (including surface pressure–area isotherm, X-ray reflectivity (XR) and interfacial rheological measurements, and a self-consistent field (SCF) theoretical analysis) was performed on air–water monolayers formed by a PLGA–PEG diblock copolymer and also by a nonglassy analogue of this diblock copolymer, poly((d,l-lactic acid-ran-glycolic acid-ran-caprolactone)-block-ethylene glycol) (PLGACL–PEG). The combined results of this study show that the two mechanisms, i.e., the glass transition of the collapsed PLGA filmmore » and the lateral repulsion of the PEG brush chains that occur simultaneously under lateral compression of the monolayer, are both responsible for the observed PLGA–PEG isotherm behavior. Upon cessation of compression, the high surface pressure of the PLGA–PEG monolayer typically relaxes over time with a stretched exponential decay, suggesting that in this diblock copolymer situation, the hydrophobic domain formed by the PLGA blocks undergoes glass transition in the high lateral compression state, analogously to the PLGA homopolymer monolayer. In the high PEG grafting density regime, the contribution of the PEG brush chains to the high monolayer surface pressure is significantly lower than what is predicted by the SCF model because of the many-body attraction among PEG segments (referred to in the literature as the “n-cluster” effects). The end-grafted PEG chains were found to be protein resistant even under the influence of the “n-cluster” effects.« less

Polydopamine-Functionalized CA-(PCL-ran-PLA) Nanoparticles for Target Delivery of Docetaxel and Chemo-photothermal Therapy of Breast Cancer

PubMed Central

Kong, Na; Deng, Mei; Sun, Xiu-Na; Chen, Yi-Ding; Sui, Xin-Bing

2018-01-01

Current limitations of cancer therapy include the lack of effective strategy for target delivery of chemotherapeutic drugs, and the difficulty of achieving significant efficacy by single treatment. Herein, we reported a synergistic chemo-photothermal strategy based on aptamer (Apt)-polydopamine (pD) functionalized CA-(PCL-ran-PLA) nanoparticles (NPs) for effective delivery of docetaxel (DTX) and enhanced therapeutic effect. The developed DTX-loaded Apt-pD-CA-(PCL-ran-PLA) NPs achieved promising advantages, such as (i) improved drug loading content (LC) and encapsulation efficiency (EE) initiated by star-shaped copolymer CA-(PCL-ran-PLA); (ii) effective target delivery of drugs to tumor sites by incorporating AS1411 aptamers; (iii) significant therapeutic efficacy caused by synergistic chemo-photothermal treatment. In addition, the pD coating strategy with simple procedures could address the contradiction between targeting modification and maintaining formerly excellent bio-properties. Therefore, with excellent bio-properties and simple preparation procedures, the DTX-loaded Apt-pD-CA-(PCL-ran-PLA) NPs effectively increased the local drug concentration in tumor sites, minimized side effects, and significantly eliminated tumors, indicating the promising application of these NPs for cancer therapy. PMID:29527167

The Prince William Sound herring fishery following the Exxon Valdez oil spill of 1989

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hose, J.E.; Brown, E.; Marty, G.D.

1995-12-31

The Exxon Valdez oil (EVO) spill of 1989 occurred a few weeks before herring spawned in Prince William Sound (PWS), AK. An estimated 40% to 50% of the egg biomass sustained exposure during early development, and the majority of pelagic larvae were collected within the oil trajectory path. Sublethal effects observed at hatch (morphologic defects and genetic damage) were related to ambient EVO concentrations. Reduced survival rates, decreased growth, genetic damage and histopathological changes were measured in pelagic larvae from oiled areas. However, because the 1989 year class is one of the smallest cohorts now in PWS, population effects aremore » difficult to assess. From 1990 to 1992, population abundance and reproductive potential remained high. When the 1989 year class was fully recruited (1993--1994), the spawning population decreased by 50% to 75% of the expected abundance. Many of the surviving fish were infected with viral hemorrhagic septicemia (VHS) and failed to spawn. Proposed causes for the VHS epizootic include previous oil exposure, density-dependent effects following the 1989 fishery closure, and reduced food availability from 1990 to 1994.« less

Transportin acts to regulate mitotic assembly events by target binding rather than Ran sequestration

PubMed Central

Bernis, Cyril; Swift-Taylor, Beth; Nord, Matthew; Carmona, Sarah; Chook, Yuh Min; Forbes, Douglass J.

2014-01-01

The nuclear import receptors importin β and transportin play a different role in mitosis: both act phenotypically as spatial regulators to ensure that mitotic spindle, nuclear membrane, and nuclear pore assembly occur exclusively around chromatin. Importin β is known to act by repressing assembly factors in regions distant from chromatin, whereas RanGTP produced on chromatin frees factors from importin β for localized assembly. The mechanism of transportin regulation was unknown. Diametrically opposed models for transportin action are as follows: 1) indirect action by RanGTP sequestration, thus down-regulating release of assembly factors from importin β, and 2) direct action by transportin binding and inhibiting assembly factors. Experiments in Xenopus assembly extracts with M9M, a superaffinity nuclear localization sequence that displaces cargoes bound by transportin, or TLB, a mutant transportin that can bind cargo and RanGTP simultaneously, support direct inhibition. Consistently, simple addition of M9M to mitotic cytosol induces microtubule aster assembly. ELYS and the nucleoporin 107–160 complex, components of mitotic kinetochores and nuclear pores, are blocked from binding to kinetochores in vitro by transportin, a block reversible by M9M. In vivo, 30% of M9M-transfected cells have spindle/cytokinesis defects. We conclude that the cell contains importin β and transportin “global positioning system”or “GPS” pathways that are mechanistically parallel. PMID:24478460

Advances in Understanding the Fate and Effects of Oil from Accidental Spills in the United States Beginning with the Exxon Valdez.

PubMed

Short, Jeffrey W

2017-07-01

Scientific studies of the environmental effects of oil spills in the United States have produced a steady stream of unexpected discoveries countering prior and often simplistic assumptions. In this brief review, I present how major discoveries from scientific studies of oil spill effects on marine ecosystems and environments, beginning with the 1989 Exxon Valdez, have led to a more informed appreciation for the complexity and the severity of the damage that major spills can do to marine ecosystems and to an increasing recognition that our ability to evaluate those damages is very limited, resulting in a structural bias toward underestimation of adverse environmental effects.

A comparative study of manhole hydraulics using stereoscopic PIV and different RANS models.

PubMed

Beg, Md Nazmul Azim; Carvalho, Rita F; Tait, Simon; Brevis, Wernher; Rubinato, Matteo; Schellart, Alma; Leandro, Jorge

2017-04-01

Flows in manholes are complex and may include swirling and recirculation flow with significant turbulence and vorticity. However, how these complex 3D flow patterns could generate different energy losses and so affect flow quantity in the wider sewer network is unknown. In this work, 2D3C stereo Particle Image Velocimetry measurements are made in a surcharged scaled circular manhole. A computational fluid dynamics (CFD) model in OpenFOAM ® with four different Reynolds Averaged Navier Stokes (RANS) turbulence model is constructed using a volume of fluid model, to represent flows in this manhole. Velocity profiles and pressure distributions from the models are compared with the experimental data in view of finding the best modelling approach. It was found among four different RANS models that the re-normalization group (RNG) k-ɛ and k-ω shear stress transport (SST) gave a better approximation for velocity and pressure.

Unsteady RANS/DES analysis of flow around helicopter rotor blades at forword flight conditions

NASA Astrophysics Data System (ADS)

Zhang, Zhenyu; Qian, Yaoru

2018-05-01

In this paper, the complex flows around forward-flying helicopter blades are numerically investigated. Both the Reynolds-averaged Navier-Stokes (RANS) and the Detached Eddy Simulation (DES) methods are used for the analysis of characteristics like local dynamic flow separation, effects of radial sweeping and reversed flow. The flow was solved by a highly efficient finite volume solver with multi-block structured grids. Focusing upon the complexity of the advance ratio effects, above properties are fully recognized. The current results showed significant agreements between both RANS and DES methods at phases with attached flow phases. Detailed information of separating flow near the withdrawal phases are given by DES results. The flow analysis of these blades under reversed flow reveals a significant interaction between the reversed flow and the span-wise sweeping.

RanBP9 overexpression down-regulates phospho-cofilin, causes early synaptic deficits and impaired learning, and accelerates accumulation of amyloid plaques in the mouse brain.

PubMed

Palavicini, Juan Pablo; Wang, Hongjie; Minond, Dmitriy; Bianchi, Elisabetta; Xu, Shaohua; Lakshmana, Madepalli K

2014-01-01

Loss of synaptic proteins and functional synapses in the brains of patients with Alzheimer's disease (AD) as well as transgenic mouse models expressing amyloid-β protein precursor is now well established. However, the earliest age at which such loss of synapses occurs, and whether known markers of AD progression accelerate functional deficits is completely unknown. We previously showed that RanBP9 overexpression leads to enhanced amyloid plaque burden in a mouse model of AD. In this study, we found significant reductions in the levels of synaptophysin and spinophilin, compared with wild-type controls, in both the cortex and the hippocampus of 5- and 6-month old but not 3- or 4-month old APΔE9/RanBP9 triple transgenic mice, and not in APΔE9 double transgenic mice, nor in RanBP9 single transgenic mice. Interestingly, amyloid plaque burden was also increased in the APΔE9/RanBP9 mice at 5-6 months. Consistent with these results, we found significant deficits in learning and memory in the APΔE9/RanBP9 mice at 5 and 6 month. These data suggest that increased amyloid plaques and accelerated learning and memory deficits and loss of synaptic proteins induced by RanBP9 are correlated. Most importantly, APΔE9/RanBP9 mice also showed significantly reduced levels of the phosphorylated form of cofilin in the hippocampus. Taken together these data suggest that RanBP9 overexpression down-regulates cofilin, causes early synaptic deficits and impaired learning, and accelerates accumulation of amyloid plaques in the mouse brain.

RANS Analyses of Turbofan Nozzles with Internal Wedge Deflectors for Noise Reduction

NASA Technical Reports Server (NTRS)

DeBonis, James R.

2009-01-01

Computational fluid dynamics (CFD) was used to evaluate the flow field and thrust performance of a promising concept for reducing the noise at take-off of dual-stream turbofan nozzles. The concept, offset stream technology, reduces the jet noise observed on the ground by diverting (offsetting) a portion of the fan flow below the core flow, thickening and lengthening this layer between the high-velocity core flow and the ground observers. In this study a wedge placed in the internal fan stream is used as the diverter. Wind, a Reynolds averaged Navier-Stokes (RANS) code, was used to analyze the flow field of the exhaust plume and to calculate nozzle performance. Results showed that the wedge diverts all of the fan flow to the lower side of the nozzle, and the turbulent kinetic energy on the observer side of the nozzle is reduced. This reduction in turbulent kinetic energy should correspond to a reduction in noise. However, because all of the fan flow is diverted, the upper portion of the core flow is exposed to the freestream, and the turbulent kinetic energy on the upper side of the nozzle is increased, creating an unintended noise source. The blockage due to the wedge reduces the fan mass flow proportional to its blockage, and the overall thrust is consequently reduced. The CFD predictions are in very good agreement with experimental flow field data, demonstrating that RANS CFD can accurately predict the velocity and turbulent kinetic energy fields. While this initial design of a large scale wedge nozzle did not meet noise reduction or thrust goals, this study identified areas for improvement and demonstrated that RANS CFD can be used to improve the concept.

Accuracy of the actuator disc-RANS approach for predicting the performance and wake of tidal turbines.

PubMed

Batten, W M J; Harrison, M E; Bahaj, A S

2013-02-28

The actuator disc-RANS model has widely been used in wind and tidal energy to predict the wake of a horizontal axis turbine. The model is appropriate where large-scale effects of the turbine on a flow are of interest, for example, when considering environmental impacts, or arrays of devices. The accuracy of the model for modelling the wake of tidal stream turbines has not been demonstrated, and flow predictions presented in the literature for similar modelled scenarios vary significantly. This paper compares the results of the actuator disc-RANS model, where the turbine forces have been derived using a blade-element approach, to experimental data measured in the wake of a scaled turbine. It also compares the results with those of a simpler uniform actuator disc model. The comparisons show that the model is accurate and can predict up to 94 per cent of the variation in the experimental velocity data measured on the centreline of the wake, therefore demonstrating that the actuator disc-RANS model is an accurate approach for modelling a turbine wake, and a conservative approach to predict performance and loads. It can therefore be applied to similar scenarios with confidence.

Nuclear size is sensitive to NTF2 protein levels in a manner dependent on Ran binding

PubMed Central

Vuković, Lidija D.; Jevtić, Predrag; Zhang, Zhaojie; Stohr, Bradley A.; Levy, Daniel L.

2016-01-01

ABSTRACT Altered nuclear size is associated with many cancers, and determining whether cancer-associated changes in nuclear size contribute to carcinogenesis necessitates an understanding of mechanisms of nuclear size regulation. Although nuclear import rates generally positively correlate with nuclear size, NTF2 levels negatively affect nuclear size, despite the role of NTF2 (also known as NUTF2) in nuclear recycling of the import factor Ran. We show that binding of Ran to NTF2 is required for NTF2 to inhibit nuclear expansion and import of large cargo molecules in Xenopus laevis egg and embryo extracts, consistent with our observation that NTF2 reduces the diameter of the nuclear pore complex (NPC) in a Ran-binding-dependent manner. Furthermore, we demonstrate that ectopic NTF2 expression in Xenopus embryos and mammalian tissue culture cells alters nuclear size. Finally, we show that increases in nuclear size during melanoma progression correlate with reduced NTF2 expression, and increasing NTF2 levels in melanoma cells is sufficient to reduce nuclear size. These results show a conserved capacity for NTF2 to impact on nuclear size, and we propose that NTF2 might be a new cancer biomarker. PMID:26823604

Application of a New Hybrid RANS/LES Modeling Paradigm to Compressible Flow

NASA Astrophysics Data System (ADS)

Oliver, Todd; Pederson, Clark; Haering, Sigfried; Moser, Robert

2017-11-01

It is well-known that traditional hybrid RANS/LES modeling approaches suffer from a number of deficiencies. These deficiencies often stem from overly simplistic blending strategies based on scalar measures of turbulence length scale and grid resolution and from use of isotropic subgrid models in LES regions. A recently developed hybrid modeling approach has shown promise in overcoming these deficiencies in incompressible flows [Haering, 2015]. In the approach, RANS/LES blending is accomplished using a hybridization parameter that is governed by an additional model transport equation and is driven to achieve equilibrium between the resolved and unresolved turbulence for the given grid. Further, the model uses an tensor eddy viscosity that is formulated to represent the effects of anisotropic grid resolution on subgrid quantities. In this work, this modeling approach is extended to compressible flows and implemented in the compressible flow solver SU2 (http://su2.stanford.edu/). We discuss both modeling and implementation challenges and show preliminary results for compressible flow test cases with smooth wall separation.

Evaluation of the toxic properties of naturally weathered Exxon Valdez crude oil to surrogate wildlife species

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stubblefield, W.A.; Hancock, G.A.; Ford, W.H.

1995-12-31

The toxic properties of naturally weathered Exxon Valdez crude oil (WEVC) to avian and mammalian wildlife species were evaluated using the surrogate species, mallard duck, Anas platyrhynchos, and European ferret, Mustela putorius. This study was conducted to evaluate the potential for toxic (rather than physical) injury to wildlife species that may have been exposed to WEVC, either through external contact or through dietary uptake. Previous studies have assessed the toxicity of unweathered crude oils, including Alaska North Slope Crude, but little information exists regarding the toxicity of a naturally weathered crude oil, typical of that encountered following a spill. Amore » battery of laboratory toxicity tests was conducted, in compliance with standard and published test procedures, to evaluate acute and subchronic toxicity of WEVC. These included tests of food avoidance, reproductive effects, and direct eggshell application toxicity. Naturally weathered EVC, recovered postspill from Prince William Sound, was used as the test material. 36 refs., 7 figs., 4 tabs.« less

LES/RANS Simulation of a Supersonic Reacting Wall Jet

NASA Technical Reports Server (NTRS)

Edwards, Jack R.; Boles, John A.; Baurle, Robert A.

2010-01-01

This work presents results from large-eddy / Reynolds-averaged Navier-Stokes (LES/RANS) simulations of the well-known Burrows-Kurkov supersonic reacting wall-jet experiment. Generally good agreement with experimental mole fraction, stagnation temperature, and Pitot pressure profiles is obtained for non-reactive mixing of the hydrogen jet with a non-vitiated air stream. A lifted flame, stabilized between 10 and 22 cm downstream of the hydrogen jet, is formed for hydrogen injected into a vitiated air stream. Flame stabilization occurs closer to the hydrogen injection location when a three-dimensional combustor geometry (with boundary layer development resolved on all walls) is considered. Volumetric expansion of the reactive shear layer is accompanied by the formation of large eddies which interact strongly with the reaction zone. Time averaged predictions of the reaction zone structure show an under-prediction of the peak water concentration and stagnation temperature, relative to experimental data and to results from a Reynolds-averaged Navier-Stokes calculation. If the experimental data can be considered as being accurate, this result indicates that the present LES/RANS method does not correctly capture the cascade of turbulence scales that should be resolvable on the present mesh. Instead, energy is concentrated in the very largest scales, which provide an over-mixing effect that excessively cools and strains the flame. Predictions improve with the use of a low-dissipation version of the baseline piecewise parabolic advection scheme, which captures the formation of smaller-scale structures superimposed on larger structures of the order of the shear-layer width.

Validation of 3D RANS-SA Calculations on Strand/Cartesian Meshes

DTIC Science & Technology

2014-01-07

a parallel environment. This allows for significant gains in efficiency and scalability of domain connectiv- ity, effectively eliminating inter... equation of state , p = ρRT is used to close the equations . 4 of 22 American Institute of Aeronautics and Astronautics 6 III.A. Discretization and...Utah State University 1415 Old Main Hill - Room 64 Logan, UT 84322 -1415 1 ABSTRACT Validation of 3D RANS-SA Calculations on Strand/Cartesian Meshes

Analysis of vegetation effect on waves using a vertical 2-D RANS model

USDA-ARS?s Scientific Manuscript database

A vertical two-dimensional (2-D) model has been applied in the simulation of wave propagation through vegetated water bodies. The model is based on an existing model SOLA-VOF which solves the Reynolds-Averaged Navier-Stokes (RANS) equations with the finite difference method on a staggered rectangula...

Winter survival of adult female harlequin ducks in relation to history of contamination by the Exxon Valdez oil spill

USGS Publications Warehouse

Esler, Daniel N.; Schmutz, J.A.; Jarvis, R.L.; Mulcahy, D.M.

2000-01-01

Harlequin duck (Histrionicus histrionicus) life-history characteristics make their populations particularly vulnerable to perturbations during nonbreeding periods. The 1989 Exxon Valdez oil spill was a major perturbation to nonbreeding habitats of harlequin ducks in Prince William Sound, Alaska, which resulted in population injury. To assess the status of population recovery from the oil spill and to evaluate factors potentially constraining full recovery, we used radiotelemetry to examine survival of adult female harlequin ducks during winters of 1995-96, 1996-97, and 1997-98. We implanted 294 harlequin ducks (154 and 140 in oiled and unoiled areas, respectively) with transmitters and tracked their signals from aircraft during October through March. We examined variation in survival rates relative to area and season (early, mid, and late winter) through comparisons of models using Akaike's information criterion (AIC(c)) values. The 3 models best supported by the data indicated that survival of birds in oiled areas was lower than in unoiled areas. Inclusion of standardized body mass during wing molt in the 3 best models did not improve their fit, indicating that body mass during wing molt did not affect subsequent winter survival. In the model that best fit our data, survival was high in early winter for both areas, lower during mid and late winter seasons, and lowest in oiled areas during mid winter. Cumulative winter survival estimated from this model was 78.0% (SE = 3.3%) in oiled areas and 83.7% (SE = 2.9%) in unoiled areas. We determined that area differences in survival were more likely related to oiling history than intrinsic geographic differences. Based on a demographic model, area differences in survival offer a likely mechanism for observed declines in populations on oiled areas. Concurrent studies indicated that harlequin ducks continued to be exposed to residual Exxon Valdez oil as much as 9 years after the spill. We suggest that oil exposure

Evidence of damage to pink salmon inhabiting Prince William Sound, Alaska, three generations after the Exxon Valdez oil spill

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bue, B.G.; Miller, G.D.; Seeb, J.E.

1995-12-31

Investigations into the environmental effects of the 1 989 Exxon Valdez oil spill lead us to conclude that chronic damage occurred in some pink salmon populations. Differences in survival between streams contaminated by oil and uncontaminated streams have been observed annually since the spill for pink salmon embryos incubating in the intertidal portions of Prince William Sound. The authors assessed the environmental influence on these findings by collecting gametes from both contaminated and uncontaminated streams, transporting them to a hatchery where intra-stream crosses were made, and incubating the resulting embryos under identical conditions. Lower survival was detected in the embryosmore » originating from the oil-contaminated streams indicating that the agent responsible for the differences detected in the field was genetic rather than environmental.« less

RANS Analyses of Turbofan Nozzles with Wedge Deflectors for Noise Reduction

NASA Technical Reports Server (NTRS)

DeBonis, James R.

2008-01-01

Computational fluid dynamics (CFD) was used to evaluate a promising concept for reducing the noise at take-off of dual-stream, turbofan nozzles. The concept, offset stream technology, reduces the jet noise observed on the ground by diverting (offsetting) the majority of the fan flow below the core flow, thickening this layer between the high velocity core flow and the ground observers. In this study a wedge placed in the internal fan stream is used as the diverter. Wind, a Reynolds Averaged Navier-Stokes (RANS) code, was used to analyze the flowfield of the exhaust plume and to calculate nozzle performance. Results showed that the wedge effectively diverts the fan flow and the turbulent kinetic energy on the observer side of the nozzle is reduced. The reduction in turbulent kinetic energy should correspond to a reduction in noise. The blockage due to the wedge reduces the fan massflow proportional to its blockage and the overall thrust is consequently reduced. The CFD predictions are in very good agreement with experimental data. This noise reduction concept shows promise for reduced jet noise at a small reduction in thrust. It has been demonstrated that RANS CFD can be used to optimize this concept.

The Defective Nuclear Lamina in Hutchinson-Gilford Progeria Syndrome Disrupts the Nucleocytoplasmic Ran Gradient and Inhibits Nuclear Localization of Ubc9▿

PubMed Central

Kelley, Joshua B.; Datta, Sutirtha; Snow, Chelsi J.; Chatterjee, Mandovi; Ni, Li; Spencer, Adam; Yang, Chun-Song; Cubeñas-Potts, Caelin; Matunis, Michael J.; Paschal, Bryce M.

2011-01-01

The mutant form of lamin A responsible for the premature aging disease Hutchinson-Gilford progeria syndrome (termed progerin) acts as a dominant negative protein that changes the structure of the nuclear lamina. How the perturbation of the nuclear lamina in progeria is transduced into cellular changes is undefined. Using patient fibroblasts and a variety of cell-based assays, we determined that progerin expression in Hutchinson-Gilford progeria syndrome inhibits the nucleocytoplasmic transport of several factors with key roles in nuclear function. We found that progerin reduces the nuclear/cytoplasmic concentration of the Ran GTPase and inhibits the nuclear localization of Ubc9, the sole E2 for SUMOylation, and of TPR, the nucleoporin that forms the basket on the nuclear side of the nuclear pore complex. Forcing the nuclear localization of Ubc9 in progerin-expressing cells rescues the Ran gradient and TPR import, indicating that these pathways are linked. Reducing nuclear SUMOylation decreases the nuclear mobility of the Ran nucleotide exchange factor RCC1 in vivo, and the addition of SUMO E1 and E2 promotes the dissociation of RCC1 and Ran from chromatin in vitro. Our data suggest that the cellular effects of progerin are transduced, at least in part, through reduced function of the Ran GTPase and SUMOylation pathways. PMID:21670151

Nuclear size is sensitive to NTF2 protein levels in a manner dependent on Ran binding.

PubMed

Vuković, Lidija D; Jevtić, Predrag; Zhang, Zhaojie; Stohr, Bradley A; Levy, Daniel L

2016-03-15

Altered nuclear size is associated with many cancers, and determining whether cancer-associated changes in nuclear size contribute to carcinogenesis necessitates an understanding of mechanisms of nuclear size regulation. Although nuclear import rates generally positively correlate with nuclear size, NTF2 levels negatively affect nuclear size, despite the role of NTF2 (also known as NUTF2) in nuclear recycling of the import factor Ran. We show that binding of Ran to NTF2 is required for NTF2 to inhibit nuclear expansion and import of large cargo molecules in Xenopus laevis egg and embryo extracts, consistent with our observation that NTF2 reduces the diameter of the nuclear pore complex (NPC) in a Ran-binding-dependent manner. Furthermore, we demonstrate that ectopic NTF2 expression in Xenopus embryos and mammalian tissue culture cells alters nuclear size. Finally, we show that increases in nuclear size during melanoma progression correlate with reduced NTF2 expression, and increasing NTF2 levels in melanoma cells is sufficient to reduce nuclear size. These results show a conserved capacity for NTF2 to impact on nuclear size, and we propose that NTF2 might be a new cancer biomarker. © 2016. Published by The Company of Biologists Ltd.

Antitumor efficiency of D-alpha-tocopheryl polyethylene glycol 1000 succinate-b-poly(epsilon-caprolactone-ran-lactide) nanoparticle-based delivery of docetaxel in mice bearing cervical cancer.

PubMed

Wang, Zhongyuan; Zeng, Xiaowei; Ma, Yaping; Liu, Jian; Tang, Xiaolong; Gao, Yongfeng; Liu, Kewei; Zhang, Jinxie; Ming, Pinghong; Huang, Laiqiang; Mei, Lin

2014-08-01

Pharmaceutical nanotechnology holds potential in cancer chemotherapy. In this research, the docetaxel-loaded D-alpha-tocopheryl polyethylene glycol 1000 succinate-b-poly(epsilon-caprolactone-ran-lactide) (TPGS-b-(PCL-ran-PLA)) nanoparticles were prepared by a modified nanoprecipitation method and then the particle size, surface morphology, nanoparticle stability, in vitro drug release and cellular uptake of nanoparticles were characterized. Finally, we evaluated the therapeutic effects of nanoparticle formulation in comparison with Taxotere both in vitro and in vivo. The size of TPGS-b-(PCL-ran-PLA) nanoparticles was about 150 nm and much smaller than PCL nanoparticles (about 185 nm) and the absolute value of zeta potential was higher than PCL nanoparticles (16.49 mV vs. 13.17 mV). FESEM images further confirmed the morphology and size of nanoparticles. The drug-loaded nanoparticles were considered to be stable, showing no change in the particle size and surface charge during three-month storage of its aqueous solution. In vitro drug release of TPGS-b-(PCL-ran-PLA) nanoparticles was much faster than PCL and PCL-TPGS nanoparticles. The cumulative drug release of docetaxel-loaded TPGS-b-(PCL-ran-PLA), PCL-TPGS, and PCL NPs were 38.00%, 34.48% and 29.04%, respectively. TPGS-b-(PCL-ran-PLA) nanoparticles showed an obvious increase of cellular uptake. Due to the advantages of TPGS-b-(PCL-ran-PLA) nanoparticles, it could achieve significantly higher level of cytotoxicity in vitro and better inhibition effect of tumor growth on xenograft BALB/c nude mice tumor model than commercial Taxotere at the same dose (1.49-fold more effective). The TPGS-b-(PCL-ran-PLA) could be used as a novel and potential biodegradable polymeric material for nanoformulation in cervical cancer chemotherapy.

Yeast Ran-Binding Protein 1 (Yrb1) Shuttles between the Nucleus and Cytoplasm and Is Exported from the Nucleus via a CRM1 (XPO1)-Dependent Pathway

PubMed Central

Künzler, Markus; Gerstberger, Thomas; Stutz, Françoise; Bischoff, F. Ralf; Hurt, Ed

2000-01-01

The RanGTP-binding protein RanBP1, which is located in the cytoplasm, has been implicated in release of nuclear export complexes from the cytoplasmic side of the nuclear pore complex. Here we show that Yrb1 (the yeast homolog of RanBP1) shuttles between the nucleus and the cytoplasm. Nuclear import of Yrb1 is a facilitated process that requires a short basic sequence within the Ran-binding domain (RBD). By contrast, nuclear export of Yrb1 requires an intact RBD, which forms a ternary complex with the Xpo1 (Crm1) NES receptor in the presence of RanGTP. Nuclear export of Yrb1, however, is insensitive towards leptomycin B, suggesting a novel type of substrate recognition between Yrb1 and Xpo1. Taken together, these data suggest that ongoing nuclear import and export is an important feature of Yrb1 function in vivo. PMID:10825193

Evolution and variability of Solanum RanGAP2, a cofactor in the incompatible interaction between the resistance protein GPA2 and the Globodera pallida effector Gp-RBP-1.

PubMed

Carpentier, Jean; Grenier, Eric; Esquibet, Magalie; Hamel, Louis-Philippe; Moffett, Peter; Manzanares-Dauleux, Maria J; Kerlan, Marie-Claire

2013-04-19

The Ran GTPase Activating Protein 2 (RanGAP2) was first described as a regulator of mitosis and nucleocytoplasmic trafficking. It was then found to interact with the Coiled-Coil domain of the Rx and GPA2 resistance proteins, which confer resistance to Potato Virus X (PVX) and potato cyst nematode Globodera pallida, respectively. RanGAP2 is thought to mediate recognition of the avirulence protein GP-RBP-1 by GPA2. However, the Gpa2-induced hypersensitive response appears to be relatively weak and Gpa2 is limited in terms of spectrum of efficiency as it is effective against only two nematode populations. While functional and evolutionary analyses of Gp-Rbp-1 and Gpa2 identified key residues in both the resistance and avirulence proteins that are involved in recognition determination, whether variation in RanGAP2 also plays a role in pathogen recognition has not been investigated. We amplified a total of 147 RanGAP2 sequences from 55 accessions belonging to 18 different di-and tetraploid Solanum species from the section Petota. Among the newly identified sequences, 133 haplotypes were obtained and 19.1% of the nucleotide sites were found to be polymorphic. The observed intra-specific nucleotide diversity ranges from 0.1 to 1.3%. Analysis of the selection pressures acting on RanGAP2 suggests that this gene evolved mainly under purifying selection. Nonetheless, we identified polymorphic positions in the protein sequence at the intra-specific level, which could modulate the activity of RanGAP2. Two polymorphic sites and a three amino-acid deletion in RanGAP2 were found to affect the timing and intensity of the Gpa2-induced hypersensitive response to avirulent GP-RBP-1 variants even though they did not confer any gain of recognition of virulent GP-RBP-1 variants. Our results highlight how a resistance gene co-factor can manage in terms of evolution both an established role as a cell housekeeping gene and an implication in plant parasite interactions. StRanGAP2 gene

Prolonged recovery of sea otters from the Exxon Valdez oil spill? A re-examination of the evidence.

PubMed

Garshelis, David L; Johnson, Charles B

2013-06-15

Sea otters (Enhydra lutris) suffered major mortality after the Exxon Valdez oil spill in Prince William Sound, Alaska, 1989. We evaluate the contention that their recovery spanned over two decades. A model based on the otter age-at-death distribution suggested a large, spill-related population sink, but this has never been found, and other model predictions failed to match empirical data. Studies focused on a previously-oiled area where otter numbers (~80) stagnated post-spill; nevertheless, post-spill abundance exceeded the most recent pre-spill count, and population trends paralleled an adjacent, unoiled-lightly-oiled area. Some investigators posited that otters suffered chronic effects by digging up buried oil residues while foraging, but an ecological risk assessment indicated that exposure levels via this pathway were well below thresholds for toxicological effects. Significant confounding factors, including killer whale predation, subsistence harvests, human disturbances, and environmental regime shifts made it impossible to judge recovery at such a small scale. Copyright © 2013 Elsevier Ltd. All rights reserved.

Impact of the Sea Empress oil spill on lysosomal stability in mussel blood cells.

PubMed

Fernley, P W; Moore, M N; Lowe, D M; Donkin, P; Evans, S

2000-01-01

Coastal zones are among the most productive and vulnerable areas on the planet. An example of impact on these fragile environments was shown in the case of the "Sea Empress" oil tanker, which ran aground in the Bristol Channel in 1996, spilling 72,000 tons of "Forties" crude oil. The objective was to investigate the sub-lethal cellular pathology and tissue hydrocarbon contamination in marine mussel populations, 4 months after the initial spill, using the neutral red retention (NRR) assay for lysosomal stability in blood cells. NRR was reduced in mussels, and indicative of cell injury, from the two sites closest to the spill in comparison with more distant and reference sites. Lysosomal stability was inversely correlated with polycyclic aromatic hydrocarbon concentrations in mussel tissues. Reduced lysosomal stability has previously been shown to contribute to impaired immunocompetence and to autophagic loss of body tissues. The use of this type of technique is discussed in the context of cost-effective, ecotoxicological tools for Integrated Coastal Zone Management.

Evaluation of RANS and LES models for Natural Convection in High-Aspect-Ratio Parallel Plate Channels

NASA Astrophysics Data System (ADS)

Fradeneck, Austen; Kimber, Mark

2017-11-01

The present study evaluates the effectiveness of current RANS and LES models in simulating natural convection in high-aspect ratio parallel plate channels. The geometry under consideration is based on a simplification of the coolant and bypass channels in the very high-temperature gas reactor (VHTR). Two thermal conditions are considered, asymmetric and symmetric wall heating with an applied heat flux to match Rayleigh numbers experienced in the VHTR during a loss of flow accident (LOFA). RANS models are compared to analogous high-fidelity LES simulations. Preliminary results demonstrate the efficacy of the low-Reynolds number k- ɛ formulations and their enhancement to the standard form and Reynolds stress transport model in terms of calculating the turbulence production due to buoyancy and overall mean flow variables.

Performance of the Tin-Free Antifouling Coating International Ecoloflex in DSTO/RAN Trials

DTIC Science & Technology

2008-10-01

Science and Technology Organisation DSTO-TR-2203 ABSTRACT A national and global ban on the application of antifouling paints containing tributyltin (TBT...Ecoloflex in DSTO/RAN Trials Executive Summary The antifouling biocide tributyltin (TBT) has provided the most effective means of preventing fouling...24 DSTO-TR-2203 1. Introduction Antifouling paints containing tributyltin (TBT) as the primary biocide were

Ran is a potential therapeutic target for cancer cells with molecular changes associated with activation of the PI3K/Akt/mTORC1 and Ras/MEK/ERK pathways

PubMed Central

Yuen, Hiu-Fung; Chan, Ka-Kui; Grills, Claire; Murray, James T.; Platt-Higgins, Angela; Eldin, Osama Sharaf; O’Byrne, Ken; Janne, Pasi; Fennell, Dean A.; Johnston, Patrick G.; Rudland, Philip S.; El-Tanani, Mohamed

2011-01-01

Purpose Cancer cells have been shown to be more susceptible to Ran knockdown compared to normal cells. We now investigate whether Ran is a potential therapeutic target of cancers with frequently found mutations that lead to higher Ras/MEK/ERK and PI3K/Akt/mTORC1 activities. Experimental Design Apoptosis was measured by flow cytometry (PI and Annexin V staining) and MTT assay in cancer cells grown under different conditions after knockdown of Ran.. The correlations between Ran expression and patient survival were examined in breast and lung cancers. Results Cancer cells with their PI3K/Akt/mTORC1 and Ras/MEK/ERK pathways inhibited are less susceptible to Ran silencing-induced apoptosis. KRas mutated, c-Met amplified and Pten-deleted cancer cells are also more susceptible to Ran silencing-induced apoptosis than their wild-type counterparts and this effect is reduced by inhibitors of the PI3K/Akt/mTORC1 and MEK/ERK pathways. Overexpression of Ran in clinical specimens is significantly associated with poor patient outcome in both breast and lung cancers. This association is dramatically enhanced in cancers with increased c-Met or osteopontin expression, or with oncogenic mutations of KRas or PIK3CA, all of which are mutations that potentially correlate with activation of the PI3K/Akt/mTORC1 and/or Ras/MEK/ERK pathways. Silencing Ran also results in dysregulation of nucleocytoplasmic transport of transcription factors and downregulation of Mcl-1 expression, at the transcriptional level, which are reversed by inhibitors of the PI3K/Akt/mTORC1 and MEK/ERK pathways. Conclusion Ran is a potential therapeutic target for treatment of cancers with mutations/changes of expression in protooncogenes that lead to activation of the PI3K/Akt/mTORC1 and Ras/MEK/ERK pathways. PMID:22090358

RANS Simulation (Actuator Disk Model[ADM]) of the NREL Phase VI wind turbine modeled as MHK Turbine

DOE Data Explorer

Javaherchi, Teymour

2016-06-08

Attached are the .cas and .dat files for the Reynolds Averaged Navier-Stokes (RANS) simulation of a single lab-scaled DOE RM1 turbine implemented in ANSYS FLUENT CFD-package. In this case study the flow field around and in the wake of the NREL Phase VI wind turbine, modeled is MHK turbine, is simulated using Actuator Disk Model (a.k.a Porous Media) by solving RANS equations coupled with a turbulence closure model. It should be highlighted that in this simulation the actual geometry of the rotor blade is not modeled. The effect of turbine rotating blades are modeled using the Actuator Disk Theory (see the stated section of attached M.Sc. thesis for more details).

Chronic effects of the Exxon Valdez oil spill on blood and enzyme chemistry of river otters

DOE Office of Scientific and Technical Information (OSTI.GOV)

Duffy, L.K.; Bowyer, R.T.; Testa, J.W.

1994-04-01

River otters (Lutra canadensis) living in marine environments of Prince William Sound, Alaska, and exposed to crude oil from the Exxon Valdez spill in March 1989 showed elevated levels of blood haptoglobins, and interleukin-6 ir, as well as elevated activities of aspartate aminotransferase, alanine aminotransferase, and creatine kinase in summer 1991. Stepwise logistic regression, using a subset of these and other blood proteins and enzyme activities as potential independent variables, correctly classified 86.4% of 22 otters as inhabiting oiled or nonoiled areas. River otters abandoned latrine sites (an index to their abundance) over three times more often in oiled thanmore » in nonoiled areas, suggesting there may have been a delayed response in river otter populations to exposure to crude oil. This is the first clear model for the long-term effects of an oil spill on blood parameters of a free-ranging mammal using a nonlethal methodology. These effects occurred two years after the spill and following a major effort to clean oil from the shorelines of Prince William Sound.« less

Analysis of multiuser mixed RF/FSO relay networks for performance improvements in Cloud Computing-Based Radio Access Networks (CC-RANs)

NASA Astrophysics Data System (ADS)

Alimi, Isiaka A.; Monteiro, Paulo P.; Teixeira, António L.

2017-11-01

The key paths toward the fifth generation (5G) network requirements are towards centralized processing and small-cell densification systems that are implemented on the cloud computing-based radio access networks (CC-RANs). The increasing recognitions of the CC-RANs can be attributed to their valuable features regarding system performance optimization and cost-effectiveness. Nevertheless, realization of the stringent requirements of the fronthaul that connects the network elements is highly demanding. In this paper, considering the small-cell network architectures, we present multiuser mixed radio-frequency/free-space optical (RF/FSO) relay networks as feasible technologies for the alleviation of the stringent requirements in the CC-RANs. In this study, we use the end-to-end (e2e) outage probability, average symbol error probability (ASEP), and ergodic channel capacity as the performance metrics in our analysis. Simulation results show the suitability of deployment of mixed RF/FSO schemes in the real-life scenarios.

Robust Group Sparse Beamforming for Multicast Green Cloud-RAN With Imperfect CSI

NASA Astrophysics Data System (ADS)

Shi, Yuanming; Zhang, Jun; Letaief, Khaled B.

2015-09-01

In this paper, we investigate the network power minimization problem for the multicast cloud radio access network (Cloud-RAN) with imperfect channel state information (CSI). The key observation is that network power minimization can be achieved by adaptively selecting active remote radio heads (RRHs) via controlling the group-sparsity structure of the beamforming vector. However, this yields a non-convex combinatorial optimization problem, for which we propose a three-stage robust group sparse beamforming algorithm. In the first stage, a quadratic variational formulation of the weighted mixed l1/l2-norm is proposed to induce the group-sparsity structure in the aggregated beamforming vector, which indicates those RRHs that can be switched off. A perturbed alternating optimization algorithm is then proposed to solve the resultant non-convex group-sparsity inducing optimization problem by exploiting its convex substructures. In the second stage, we propose a PhaseLift technique based algorithm to solve the feasibility problem with a given active RRH set, which helps determine the active RRHs. Finally, the semidefinite relaxation (SDR) technique is adopted to determine the robust multicast beamformers. Simulation results will demonstrate the convergence of the perturbed alternating optimization algorithm, as well as, the effectiveness of the proposed algorithm to minimize the network power consumption for multicast Cloud-RAN.

Shoreline oiling conditions in Prince William Sound following the Exxon Valdez oil spill

DOE Office of Scientific and Technical Information (OSTI.GOV)

Neff, J.M.; Owens, E.H.; Stoker, S.W.

1995-12-31

Following the Exxon Valdez oil spill of March 24, 1989, in Prince William Sound, Alaska, Exxon conducted comprehensive, systematic shoreline surveys in cooperation with federal and state authorities to obtain information on the distribution and magnitude of shoreline oiling and to identify natural and cultural resources requiring special protection. Similar joint surveys were performed during the springs of 1990, 1991, and 1992 on all Prince william Sound and Gulf of Alaska shorelines that were suspected of having remnants of weathered oil and that would benefit from further cleanup. In the springs of 1990, 1991, and 1992, isolated pockets of subsurfacemore » oil were found, chiefly in small scattered zones in coarse cobble/boulder sediments in the upper intertidal or supratidal zones. In 1991, about one-third of the subdivisions in Prince William Sound with surface oil also contained some subsurface oil. The areal extent of this subsurface oil declined by nearly 70% between 1991 and 1992, from about 37,000 m{sup 2} to about 12,000 m{sup 2}. Moreover, where subsurface oil remained in 1992, it was present in lesser amounts. Rates of oil removal were greatest on coastal sections treated early in the spring and summer of 1989. Where shoreline treatment was delayed, the subsequent rate of removal of oil from the shore by natural processes was slower. 27 refs., 10 figs., 3 tabs.« less

Evaluating the Effectiveness of Continuous Shoulder Rumble Strips in Reducing "Ran-off-roadway" Single-vehicle Crashes

DOT National Transportation Integrated Search

2007-03-01

The research efforts presented in this report, prepared for the Nevada Department of Transportation, summarizes the evaluation of the effectiveness of continuous shoulder rumble strip treatment to reduce single-vehicle ran-off-roadway crashes in Neva...

Response of common murres to the Exxon Valdez Oil Spill and long-term changes in the Gulf of Alaska marine ecosystem

USGS Publications Warehouse

Piatt, John F.; Anderson, Paul; Rice, S.D.; Spies, R.B.; Wolfe, D.A.; Wright, B.A.

1996-01-01

Short-term effects of the 1989 TV Exxon Valdez oil spill on seabirds were dramatic and well documented. Seabird populations at sea in the spill zone were immediately depressed, and more than 30,000 dead, oiled seabirds were recovered from beaches within months of the spill. It is estimated that 250,000 seabirds were killed by oil, of which 74% were murres. Based on comparisons of prespill (1970s) and postspill (1989-1994) data, long-term effects on murres attributed to oil pollution included population declines, reduced breeding success, and delayed breeding phenology. Populations remained depressed, but breeding success phenology gradually returned to normal levels by 1993. An alternative hypothesis to explain these long-term effects is that murres were responding to natural events in their marine environment. Flow of the Alaska Coastal Current (ACC) was at an all-time low in 1989, and this may have reduced and delayed biological productivity in the ACC. On a broader time scale, marked changes in marine fish communities have occurred during the past 20 years. Coincident with cyclical fluctuations in seawater temperatures, the abundance of small forage species (e.g., humpy shrimp, capelin, and Pacific sandfish) declined precipitously in the late 1970s while populations of large predatory fish (e.g., walleye pollock, Pacific cod, and flatfish) increased dramatically. Correspondingly, seabird diets shifted from mostly capelin in the 1970s to mostly Pacific sand land and juvenile pollock in the late 1980s. Furthermore, a variety of seabirds and marine mammals both inside and outside of the oil spill zone exhibited signs of food stress (population declines, reduced productivity, die-offs) throughout the 1980s and early 1990s. We conclude that available data are inadequate to distinguish between long-term effects of the Exxon Valdez oil spill on murres and a natural response of murres to long-term changes in their marine environment.

Algorithmes de couplage RANS et ecoulement potentiel

NASA Astrophysics Data System (ADS)

Gallay, Sylvain

-decrochage. L'algorithme de couplage a ete compare a des donnees de plus haute fidelite sur des configurations issues de la litterature. Un modele de fuselage base sur des relations empiriques et des simulations RANS a ete teste et valide. Les coefficients de portance, de trainee et de moment de tangage ainsi que les coefficients de pression extraits le long de l'envergure ont montre un bon accord avec les donnees de soufflerie et les modeles RANS pour des configurations transsoniques. Une configuration a geometrie hypersustentatoire a permis d'etudier la modelisation des surfaces hypersustentees de la methode d'ecoulement potentiel, demontrant que la cambrure peut etre prise en compte uniquement dans les donnees visqueuses.

Comprehensive Approaches to Multiphase Flows in Geophysics - Application to nonisothermal, nonhomogenous, unsteady, large-scale, turbulent dusty clouds I. Hydrodynamic and Thermodynamic RANS and LES Models

DOE Office of Scientific and Technical Information (OSTI.GOV)

S. Dartevelle

2005-09-05

The objective of this manuscript is to fully derive a geophysical multiphase model able to ''accommodate'' different multiphase turbulence approaches; viz., the Reynolds Averaged Navier-Stokes (RANS), the Large Eddy Simulation (LES), or hybrid RANSLES. This manuscript is the first part of a larger geophysical multiphase project--lead by LANL--that aims to develop comprehensive modeling tools for large-scale, atmospheric, transient-buoyancy dusty jets and plume (e.g., plinian clouds, nuclear ''mushrooms'', ''supercell'' forest fire plumes) and for boundary-dominated geophysical multiphase gravity currents (e.g., dusty surges, diluted pyroclastic flows, dusty gravity currents in street canyons). LES is a partially deterministic approach constructed on either amore » spatial- or a temporal-separation between the large and small scales of the flow, whereas RANS is an entirely probabilistic approach constructed on a statistical separation between an ensemble-averaged mean and higher-order statistical moments (the so-called ''fluctuating parts''). Within this specific multiphase context, both turbulence approaches are built up upon the same phasic binary-valued ''function of presence''. This function of presence formally describes the occurrence--or not--of any phase at a given position and time and, therefore, allows to derive the same basic multiphase Navier-Stokes model for either the RANS or the LES frameworks. The only differences between these turbulence frameworks are the closures for the various ''turbulence'' terms involving the unknown variables from the fluctuating (RANS) or from the subgrid (LES) parts. Even though the hydrodynamic and thermodynamic models for RANS and LES have the same set of Partial Differential Equations, the physical interpretations of these PDEs cannot be the same, i.e., RANS models an averaged field, while LES simulates a filtered field. In this manuscript, we also demonstrate that this multiphase model fully fulfills the second law

PCB exposure in sea otters and harlequin ducks in relation to history of contamination by the Exxon Valdez oil spill

USGS Publications Warehouse

Ricca, Mark A.; Miles, A. Keith; Ballachey, Brenda E.; Bodkin, James L.; Esler, Daniel N.; Trust, Kimberly A.

2010-01-01

Exposure to contaminants other than petroleum hydrocarbons could confound interpretation of Exxon Valdez oil spill effects on biota at Prince William Sound, Alaska. Hence, we investigated polychlorinated biphenyls (PCBs) in blood of sea otters and harlequin ducks sampled during 1998. PCB concentrations characterized by lower chlorinated congeners were highest in sea otters from the unoiled area, whereas concentrations were similar among harlequin ducks from the oiled and unoiled area. Blood enzymes often elevated by xenobiotics were not related to PCB concentrations in sea otters. Only sea otters from the unoiled area had estimated risk from PCBs, and PCB composition or concentrations did not correspond to reported lower measures of population performance in sea otters or harlequin ducks from the oiled area. PCBs probably did not influence limited sea otter or harlequin duck recovery in the oiled area a decade after the spill.

Analysis Of Direct Numerical Simulation Results Of Adverse Pressure Gradient Boundary Layer Through Anisotropy Invariant Mapping And Comparison With The Rans Simulations

NASA Astrophysics Data System (ADS)

Gungor, Ayse Gul; Nural, Ozan Ekin; Ertunc, Ozgur

2017-11-01

Purpose of this study is to analyze the direct numerical simulation data of a turbulent boundary layer subjected to strong adverse pressure gradient through anisotropy invariant mapping. RANS simulation using the ``Elliptic Blending Model'' of Manceau and Hanjolic (2002) is also conducted for the same flow case with commercial software Star-CCM+ and comparison of the results with DNS data is done. RANS simulation captures the general trends in the velocity field but, significant deviations are found when skin friction coefficients are compared. Anisotropy invariant map of Lumley and Newman (1977) and barycentric map of Banerjee et al. (2007) are used for the analysis. Invariant mapping of the DNS data has yielded that at locations away from the wall, flow is close to one component turbulence state. In the vicinity of the wall, turbulence is at two component limit which is one border of the barycentric map and as the flow evolves along the streamwise direction, it approaches to two component turbulence state. Additionally, at the locations away from the wall, turbulence approaches to two component limit. Furthermore, analysis of the invariants of the RANS simulations shows dissimilar results. In RANS simulations invariants do not approach to any of the limit states unlike the DNS.

Assessment of Hybrid RANS/LES Turbulence Models for Aeroacoustics Applications

NASA Technical Reports Server (NTRS)

Vatsa, Veer N.; Lockard, David P.

2010-01-01

Predicting the noise from aircraft with exposed landing gear remains a challenging problem for the aeroacoustics community. Although computational fluid dynamics (CFD) has shown promise as a technique that could produce high-fidelity flow solutions, generating grids that can resolve the pertinent physics around complex configurations can be very challenging. Structured grids are often impractical for such configurations. Unstructured grids offer a path forward for simulating complex configurations. However, few unstructured grid codes have been thoroughly tested for unsteady flow problems in the manner needed for aeroacoustic prediction. A widely used unstructured grid code, FUN3D, is examined for resolving the near field in unsteady flow problems. Although the ultimate goal is to compute the flow around complex geometries such as the landing gear, simpler problems that include some of the relevant physics, and are easily amenable to the structured grid approaches are used for testing the unstructured grid approach. The test cases chosen for this study correspond to the experimental work on single and tandem cylinders conducted in the Basic Aerodynamic Research Tunnel (BART) and the Quiet Flow Facility (QFF) at NASA Langley Research Center. These configurations offer an excellent opportunity to assess the performance of hybrid RANS/LES turbulence models that transition from RANS in unresolved regions near solid bodies to LES in the outer flow field. Several of these models have been implemented and tested in both structured and unstructured grid codes to evaluate their dependence on the solver and mesh type. Comparison of FUN3D solutions with experimental data and numerical solutions from a structured grid flow solver are found to be encouraging.

A Priori Analysis of a Compressible Flamelet Model using RANS Data for a Dual-Mode Scramjet Combustor

NASA Technical Reports Server (NTRS)

Quinlan, Jesse R.; Drozda, Tomasz G.; McDaniel, James C.; Lacaze, Guilhem; Oefelein, Joseph

2015-01-01

In an effort to make large eddy simulation of hydrocarbon-fueled scramjet combustors more computationally accessible using realistic chemical reaction mechanisms, a compressible flamelet/progress variable (FPV) model was proposed that extends current FPV model formulations to high-speed, compressible flows. Development of this model relied on observations garnered from an a priori analysis of the Reynolds-Averaged Navier-Stokes (RANS) data obtained for the Hypersonic International Flight Research and Experimentation (HI-FiRE) dual-mode scramjet combustor. The RANS data were obtained using a reduced chemical mechanism for the combustion of a JP-7 surrogate and were validated using avail- able experimental data. These RANS data were then post-processed to obtain, in an a priori fashion, the scalar fields corresponding to an FPV-based modeling approach. In the current work, in addition to the proposed compressible flamelet model, a standard incompressible FPV model was also considered. Several candidate progress variables were investigated for their ability to recover static temperature and major and minor product species. The effects of pressure and temperature on the tabulated progress variable source term were characterized, and model coupling terms embedded in the Reynolds- averaged Navier-Stokes equations were studied. Finally, results for the novel compressible flamelet/progress variable model were presented to demonstrate the improvement attained by modeling the effects of pressure and flamelet boundary conditions on the combustion.

The distribution of lingering subsurface oil from the Exxon Valdez oil spill

USGS Publications Warehouse

Michel, Jacqueline; Nixon, Zachary; Hayes, Miles O.; Irvine, Gail V.; Short, Jeffrey W.

2011-01-01

This study used field data and a suite of geospatial models to identify areas where subsurface oil is likely to still be present on the shorelines of Prince William Sound (PWS) and the Gulf of Alaska (GOA) affected by the Exxon Valdez oil spill, as well as the factors related to continued presence of such oil. The goal was to identify factors and accompanying models that could serve as screening tools to prioritize shorelines for different remediation methods. The models were based on data collected at 314 shoreline segments surveyed between 2001 and 2007. These field data allowed us to identify a number of geomorphologic and hydrologic factors that have contributed to the persistence of subsurface oil within PWS and GOA two decades after the spill. Because synoptic data layers for describing each of these factors at all locations were not available, the models developed used existing data sets as surrogates to represent these factors, such as distance to a stream mouth or shoreline convexity. While the linkages between the data used and the physical phenomena that drive persistence are not clearly understood in all cases, the performance of these models was remarkably good. The models simultaneously evaluate all identified variables to predict the presence of different types of subsurface oiling in a rigorous, unbiased manner. The refined model results suggest there are a limited but significant number of as-yet unsurveyed locations in the study area that are likely to contain subsurface oil. Furthermore, the model results may be used to quantitatively prioritize shoreline for investigation with known uncertainty.

Steady state RANS simulations of temperature fluctuations in single phase turbulent mixing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kickhofel, J.; Fokken, J.; Kapulla, R.

2012-07-01

Single phase turbulent mixing in nuclear power plant circuits where a strong temperature gradient is present is known to precipitate pipe failure due to thermal fatigue. Experiments in a square mixing channel offer the opportunity to study the phenomenon under simple and easily reproducible boundary conditions. Measurements of this kind have been performed extensively at the Paul Scherrer Inst. in Switzerland with a high density of instrumentation in the Generic Mixing Experiment (GEMIX). As a fundamental mixing phenomena study closely related to the thermal fatigue problem, the experimental results from GEMIX are valuable for the validation of CFD codes strivingmore » to accurately simulate both the temperature and velocity fields in single phase turbulent mixing. In the experiments two iso-kinetic streams meet at a shallow angle of 3 degrees and mix in a straight channel of square cross-section under various degrees of density, temperature, and viscosity stratification over a range of Reynolds numbers ranging from 5*10{sup 3} to 1*10{sup 5}. Conductivity measurements, using wire-mesh and wall sensors, as well as optical measurements, using particle image velocimetry, were conducted with high temporal and spatial resolutions (up to 2.5 kHz and 1 mm in the case of the wire mesh sensor) in the mixing zone, downstream of a splitter plate. The present paper communicates the results of RANS modeling of selected GEMIX tests. Steady-state CFD calculations using a RANS turbulence model represent an inexpensive method for analyzing large and complex components in commercial nuclear reactors, such as the downcomer and reactor pressure vessel heads. Crucial to real world applicability, however, is the ability to model turbulent heat fluctuations in the flow; the Turbulent Heat Flux Transport model developed by ANSYS CFX is capable, by implementation of a transport equation for turbulent heat fluxes, of readily modeling these values. Furthermore, the closure of the

Bioremediation of marine oil spills: when and when not--the Exxon Valdez experience.

PubMed

Atlas, Ronald; Bragg, James

2009-03-01

In this article we consider what we have learned from the Exxon Valdez oil spill (EVOS) in terms of when bioremediation should be considered and what it can accomplish. We present data on the state of oiling of Prince William Sound shorelines 18 years after the spill, including the concentration and composition of subsurface oil residues (SSOR) sampled by systematic shoreline surveys conducted between 2002 and 2007. Over this period, 346 sediment samples were analysed by GC-MS and extents of hydrocarbon depletion were quantified. In 2007 alone, 744 sediment samples were collected and extracted, and 222 were analysed. Most sediment samples from sites that were heavily oiled by the spill and physically cleaned and bioremediated between 1989 and 1991 show no remaining SSOR. Where SSOR does remain, it is for the most part highly weathered, with 82% of 2007 samples indicating depletion of total polycyclic aromatic hydrocarbon (Total PAH) of >70% relative to EVOS oil. This SSOR is sequestered in patchy deposits under boulder/cobble armour, generally in the mid-to-upper intertidal zone. The relatively high nutrient concentrations measured at these sites, the patchy distribution and the weathering state of the SSOR suggest that it is in a form and location where bioremediation likely would be ineffective at increasing the rate of hydrocarbon removal. © 2009 The Authors. Journal compilation © 2009 Society for Applied Microbiology and Blackwell Publishing Ltd.

Exxon Valdez oil spill. State/federal natural resource damage assessment. Impact of the oil spill on juvenile pink and chum salmon and their prey in critical nearshore habitats. Fish/shellfish study number 4. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1994-01-01

The objective of the study was to determine the impact of the Exxon Valdez oil spill on juvenile pink and chum salmon during their initial period of residency in nearshore marine habitats of western Prince William Sound. In oiled locations, both pink and chum salmon fry in the nearshore marine environment observations and laboratory experiments indicated that ingestion of whole oil or oil-contaminated prey was an important route of contamination.

Identification of RAN1 orthologue associated with sex determination through whole genome sequencing analysis in fig (Ficus carica L.).

PubMed

Mori, Kazuki; Shirasawa, Kenta; Nogata, Hitoshi; Hirata, Chiharu; Tashiro, Kosuke; Habu, Tsuyoshi; Kim, Sangwan; Himeno, Shuichi; Kuhara, Satoru; Ikegami, Hidetoshi

2017-01-25

With the aim of identifying sex determinants of fig, we generated the first draft genome sequence of fig and conducted the subsequent analyses. Linkage analysis with a high-density genetic map established by a restriction-site associated sequencing technique, and genome-wide association study followed by whole-genome resequencing analysis identified two missense mutations in RESPONSIVE-TO-ANTAGONIST1 (RAN1) orthologue encoding copper-transporting ATPase completely associated with sex phenotypes of investigated figs. This result suggests that RAN1 is a possible sex determinant candidate in the fig genome. The genomic resources and genetic findings obtained in this study can contribute to general understanding of Ficus species and provide an insight into fig's and plant's sex determination system.

RANS Simulation (Virtual Blade Model [VBM]) of Single Full Scale DOE RM1 MHK Turbine

DOE Data Explorer

Javaherchi, Teymour; Aliseda, Alberto

2013-04-10

Attached are the .cas and .dat files along with the required User Defined Functions (UDFs) and look-up table of lift and drag coefficients for Reynolds Averaged Navier-Stokes (RANS) simulation of a single full scale DOE RM1 turbine implemented in ANSYS FLUENT CFD-package. In this case study the flow field around and in the wake of the full scale DOE RM1 turbine is simulated using Blade Element Model (a.k.a Virtual Blade Model) by solving RANS equations coupled with k-\\omega turbulence closure model. It should be highlighted that in this simulation the actual geometry of the rotor blade is not modeled. The effect of turbine rotating blades are modeled using the Blade Element Theory. This simulation provides an accurate estimate for the performance of device and structure of it's turbulent far wake. Due to the simplifications implemented for modeling the rotating blades in this model, VBM is limited to capture details of the flow field in near wake region of the device.

Foreword: The evolution from species-specific damage assessment to ecosystem centric studies over the multi-decade period following the Exxon Valdez oil spill

NASA Astrophysics Data System (ADS)

Rice, Stanley; Peterson, Charles

2018-01-01

The 1989 Exxon Valdez oil spill in Prince William Sound became the largest spill in U.S. waters at that time, and impacts and recovery from the spill were monitored extensively across time and species through to the present. By the 10-year anniversary, it was apparent that this spill had induced long-lasting oil contamination of shoreline habitats, long-lasting ecological effects, and demanded fundamental changes in the conceptual model of how to study spills and what to expect had been changed. This special volume (1) presents a selection of papers representing the evolution of studies leading to those currently underway; and (2) demonstrates how there is constant change in the environment, requiring larger and more complex studies to understand both natural and man-caused changes to a coastal ecosystem.

Severe Storm in the Sea of Azov

NASA Technical Reports Server (NTRS)

2007-01-01

A fierce storm struck both the Black Sea and the Sea of Azov on November 11, 2007. According to news reports, as many as 10 ships either sank or ran aground, one of them an oil tanker. The Russian tanker Volganeft-139 was anchored to the sea floor in the Kerch Strait linking the Black and Azov Seas when 108-kilometer- (67-mile-) per-hour winds tore the ship apart. As of November 12, up to 2,000 metric tons of fuel oil had leaked from the ship. On November 11, 2007, the day the storm struck, the Moderate Resolution Imaging Spectroradiometer (MODIS) on NASA's Aqua satellite captured this image of the region. Thick clouds obscure the view of much of the land area, including Ukraine, Belarus, western Russia, and Georgia. Clouds also obscure the Sea of Azov, although skies over the Black Sea are somewhat clearer. Over the Sea of Azov and immediately to the north, the clouds form a vague swirling pattern, suggestive of a low-pressure cyclonic system.

Application of the order-of-magnitude analysis to a fourth-order RANS closure for simulating a 2D boundary layer

NASA Astrophysics Data System (ADS)

Poroseva, Svetlana V.

2013-11-01

Simulations of turbulent boundary-layer flows are usually conducted using a set of the simplified Reynolds-Averaged Navier-Stokes (RANS) equations obtained by order-of-magnitude analysis (OMA) of the original RANS equations. The resultant equations for the mean-velocity components are closed using the Boussinesq approximation for the Reynolds stresses. In this study OMA is applied to the fourth-order RANS (FORANS) set of equations. The FORANS equations are chosen as they can be closed on the level of the 5th-order correlations without using unknown model coefficients, i.e. no turbulent diffusion modeling is required. New models for the 2nd-, 3rd- and 4th-order velocity-pressure gradient correlations are derived for the current FORANS equations. This set of FORANS equations and models are analyzed for the case of two-dimensional mean flow. The equations include familiar transport terms for the mean-velocity components along with algebraic expressions for velocity correlations of different orders specific to the FORANS approach. Flat plate DNS data (Spalart, 1988) are used to verify these expressions and the areas of the OMA applicability within the boundary layer. The material is based upon work supported by NASA under award NNX12AJ61A.

RANS Simulation (Rotating Reference Frame Model [RRF]) of Single Full Scale DOE RM1 MHK Turbine

DOE Data Explorer

Javaherchi, Teymour; Stelzenmuller, Nick; Aliseda, Alberto

2013-04-10

Attached are the .cas and .dat files for the Reynolds Averaged Navier-Stokes (RANS) simulation of a single full scale DOE RM1 turbine implemented in ANSYS FLUENT CFD-package. In this case study taking advantage of the symmetry of the DOE RM1 geometry, only half of the geometry is modeled using (Single) Rotating Reference Frame model [RRF]. In this model RANS equations, coupled with k-\\omega turbulence closure model, are solved in the rotating reference frame. The actual geometry of the turbine blade is included and the turbulent boundary layer along the blade span is simulated using wall-function approach. The rotation of the blade is modeled by applying periodic boundary condition to sets of plane of symmetry. This case study simulates the performance and flow field in both the near and far wake of the device at the desired operating conditions. The results of these simulations showed good agreement to the only publicly available numerical simulation of the device done in the NREL. Please see the attached paper.

LES, DNS and RANS for the analysis of high-speed turbulent reacting flows

NASA Technical Reports Server (NTRS)

Adumitroaie, V.; Colucci, P. J.; Taulbee, D. B.; Givi, P.

1995-01-01

The purpose of this research is to continue our efforts in advancing the state of knowledge in large eddy simulation (LES), direct numerical simulation (DNS), and Reynolds averaged Navier Stokes (RANS) methods for the computational analysis of high-speed reacting turbulent flows. In the second phase of this work, covering the period 1 Aug. 1994 - 31 Jul. 1995, we have focused our efforts on two programs: (1) developments of explicit algebraic moment closures for statistical descriptions of compressible reacting flows and (2) development of Monte Carlo numerical methods for LES of chemically reacting flows.

Procedures and rationale for marking sea otters captured and treated during the T/V Exxon Valdez oil spill

USGS Publications Warehouse

DeGange, A.R.; Williams, T.D.; Bayha, Keith; Kormendy, Jennifer

1990-01-01

Four methods were used for marking sea otters (Enhydra lutris) captured and treated during the response to the T/V Exxon Valdez oil spill. Colored and numbered flipper tags were placed on each sea otter that was brought to the otter treatment centers. These tags allowed individual recognition and permitted the tracking of individuals through the treatment and holding processes. Recovery of tagged carcasses may provide a crude measure of the fates of rehabilitated otters. Seven sea otters were instrumented with radio transmitters attached to flipper tags as part of a pilot release program. The results of that study were inconclusive. Forty-five sea otters were implanted with radio transmitters as part of a study to assess the fate of rehabilitated sea otters. Specific objectives of the study include estimating survived rates and monitoring the reproductive success of the sample of rehabilitated sea otters and comparing the results with similar variables in a control population. Transponder chips were injected in the perianal region of all but seven of the instrumented sea otters, and all were tagged with red flipper tags. The advantages and disadvantages of each type of tag are discussed.

Synthesis of nearshore recovery following the 1989 Exxon Valdez oil spill: sea otter liver pathology and survival in Western Prince William Sound, 2001 – 2008

USGS Publications Warehouse

Ballachey, Brenda E.; Monson, Daniel H.; Kloecker, Kimberly A.; Esslinger, George G.; Mohr, F.C.; Lipscomb, T.P.; Murray, M.J.; Howlin, S.

2014-01-01

We examined livers and liver biopsies collected from captured sea otters in WPWS, 2001–2008, to determine whether indicators of liver health correlated with history of oil contamination from the 1989 Exxon Valdez oil spill. Sea otters captured in oiled areas had a significantly higher proportion of livers with gross pathological change, based on visual inspection at the time of capture, than those from unoiled areas. Of the 10 histopathology variables scored on liver biopsies, only two (vacuolar change and pigment) differed between animals from oiled and unoiled areas, and neither correlated with gross pathology scores. Vacuolar change indicates physiological disturbance, which is consistent with potential effects from oil exposure but also could be influenced by a number of other factors. We concluded that, as of 2008, some differences in liver health were evident between sea otters from oiled and unoiled areas; these differences were consistent with, but not specific to, effects that might be expected with sublethal exposure to lingering Exxon Valdez oil. We also quantified variation in survival of radiomarked sea otters within oiled areas of WPWS in relation to age, sex, body condition, selected blood serum chemistry variables, and histological scores indicative of liver health. Of the variables considered, only the serum enzyme aspartate aminotransferase (AST) and the ratio of serum proteins albumin and globulin (A/G) were correlated with survival, with higher levels of AST and lower levels of A/G associated with increased likelihood of mortality. High AST and low A/G both may be indicative of liver disease. Taken together, results reported here suggest that liver health of sea otters in oiled areas was slightly poorer than those from unoiled areas and, ifurther, that this may have translated to poorer survival through 2008, nearly 2 decades after the spill. More recently collected information indicated that mortality patterns and abundance had returned to

Harlequin Duck recovery from the Exxon Valdez oil spill: A population genetics perspective

USGS Publications Warehouse

Lanctot, R.; Goatcher, B.; Scribner, K.; Talbot, S.; Pierson, B.; Esler, Daniel N.; Zwiefelhofer, D.

1999-01-01

Concerns about Harlequin Duck (Histrionicus histrionicus) population recovery following the Exxon Valdez oil spill led biologists to ask whether birds located in different molting and wintering areas belong to genetically distinct and, thus, demographically independent populations. Owing to the lack of direct observations of movements among marine areas, three classes of genetic markers that differed in mode of inheritance were used to evaluate the degree of genetic differentiation among wintering areas within Prince William Sound (PWS) and the Alaska Peninsula and Kodiak Archipelago (APKA). We could not reject the null hypothesis that the wintering aggregations within each region are composed of a single genetically panmictic population. Differences in genotype frequencies among wintering locations within PWS and APKA were low and nonsignificant for all three classes of markers. Furthermore, we saw no evidence for deviations in Hardy-Weinberg equilibrium or gametic disequilibrium between loci within a winter collection site as would be expected if these locales were composed of individuals from reproductively isolated (and genetically distinct) breeding locales. Finally, no evidence for significant structuring was noted between PWS and APKA. Lack of spatial genetic structuring could be due to the cumulative effects of low levels of gene flow over long time periods, low levels of gene flow by immature birds moving between marine habitats, or to episodic dispersal caused by habitat alteration (e.g. volcanic eruptions). Harlequin Ducks are likely to recolonize or enhance populations in areas recovering from environmental damage via emigration of birds from non-affected areas. Demographic studies suggest, however, that levels of movements are low, and that population recovery by emigration is a long-term process.

Potential involvement of drought-induced Ran GTPase CLRan1 in root growth enhancement in a xerophyte wild watermelon.

PubMed

Akashi, Kinya; Yoshimura, Kazuya; Kajikawa, Masataka; Hanada, Kouhei; Kosaka, Rina; Kato, Atsushi; Katoh, Akira; Nanasato, Yoshihiko; Tsujimoto, Hisashi; Yokota, Akiho

2016-10-01

Enhanced root growth is known as the survival strategy of plants under drought. Previous proteome analysis in drought-resistant wild watermelon has shown that Ran GTPase, an essential regulator of cell division and proliferation, was induced in the roots under drought. In this study, two cDNAs were isolated from wild watermelon, CLRan1 and CLRan2, which showed a high degree of structural similarity with those of other plant Ran GTPases. Quantitative RT-PCR and promoter-GUS assays suggested that CLRan1 was expressed mainly in the root apex and lateral root primordia, whereas CLRan2 was more broadly expressed in other part of the roots. Immunoblotting analysis confirmed that the abundance of CLRan proteins was elevated in the root apex region under drought stress. Transgenic Arabidopsis overexpressing CLRan1 showed enhanced primary root growth, and the growth was maintained under osmotic stress, indicating that CLRan1 functions as a positive factor for maintaining root growth under stress conditions.

Validation of Heat Transfer and Film Cooling Capabilities of the 3-D RANS Code TURBO

NASA Technical Reports Server (NTRS)

Shyam, Vikram; Ameri, Ali; Chen, Jen-Ping

2010-01-01

The capabilities of the 3-D unsteady RANS code TURBO have been extended to include heat transfer and film cooling applications. The results of simulations performed with the modified code are compared to experiment and to theory, where applicable. Wilcox s k-turbulence model has been implemented to close the RANS equations. Two simulations are conducted: (1) flow over a flat plate and (2) flow over an adiabatic flat plate cooled by one hole inclined at 35 to the free stream. For (1) agreement with theory is found to be excellent for heat transfer, represented by local Nusselt number, and quite good for momentum, as represented by the local skin friction coefficient. This report compares the local skin friction coefficients and Nusselt numbers on a flat plate obtained using Wilcox's k-model with the theory of Blasius. The study looks at laminar and turbulent flows over an adiabatic flat plate and over an isothermal flat plate for two different wall temperatures. It is shown that TURBO is able to accurately predict heat transfer on a flat plate. For (2) TURBO shows good qualitative agreement with film cooling experiments performed on a flat plate with one cooling hole. Quantitatively, film effectiveness is under predicted downstream of the hole.

Assessing Risks to Sea Otters and the Exxon Valdez Oil Spill: New Scenarios, Attributable Risk, and Recovery

PubMed Central

Harwell, Mark A.; Gentile, John H.

2014-01-01

The Exxon Valdez oil spill occurred more than two decades ago, and the Prince William Sound ecosystem has essentially recovered. Nevertheless, discussion continues on whether or not localized effects persist on sea otters (Enhydra lutris) at northern Knight Island (NKI) and, if so, what are the associated attributable risks. A recent study estimated new rates of sea otter encounters with subsurface oil residues (SSOR) from the oil spill. We previously demonstrated that a potential pathway existed for exposures to polycyclic aromatic hydrocarbons (PAHs) and conducted a quantitative ecological risk assessment using an individual-based model that simulated this and other plausible exposure pathways. Here we quantitatively update the potential for this exposure pathway to constitute an ongoing risk to sea otters using the new estimates of SSOR encounters. Our conservative model predicted that the assimilated doses of PAHs to the 1-in-1000th most-exposed sea otters would remain 1–2 orders of magnitude below the chronic effects thresholds. We re-examine the baseline estimates, post-spill surveys, recovery status, and attributable risks for this subpopulation. We conclude that the new estimated frequencies of encountering SSOR do not constitute a plausible risk for sea otters at NKI and these sea otters have fully recovered from the oil spill. PMID:24587690

Shoreline ecology program for Prince William Sound, Alaska, following the Exxon Valdez oil spill. Part 3: Biology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gilfillan, E.S.; Page, D.S.; Harner, E.J.

1995-12-31

This study describes the biological results of a comprehensive shoreline ecology program designed to assess ecological recovery in Prince William Sound following the Exxon Valdez oil spill on march 24, 1989. The program is an application of the ``Sediment Quality Triad`` approach, combining chemical, toxicological, and biological measurements. The study was designed so that results could be extrapolated to the entire spill zone in Prince William Sound. The spill affected four major shoreline habitat types in Prince William Sound: pebble/gravel, boulder/cobble, sheltered bedrock, and exposed bedrock. The study design had two components: (1) one-time stratified random sampling at 64 sitesmore » representing four habitats and four oiling levels (including unoiled reference sites) and (2) periodic sampling at 12 nonrandomly chosen sites that included some of the most heavily oiled locations in the sound. Biological communities on rock surfaces and in intertidal and shallow subtidal sediments were analyzed for differences resulting from to oiling in each of 16 habitat/tide zone combinations. Statistical methods included univariate analyses of individual species abundances and community parameter variables (total abundance, species richness, and Shannon diversity), and multivariate correspondence analysis of community structure. 58 refs., 13 figs., 9 tabs.« less

Evaluation of Liquid Fuel Spray Models for Hybrid RANS/LES and DLES Prediction of Turbulent Reactive Flows

NASA Astrophysics Data System (ADS)

Afshar, Ali

An evaluation of Lagrangian-based, discrete-phase models for multi-component liquid sprays encountered in the combustors of gas turbine engines is considered. In particular, the spray modeling capabilities of the commercial software, ANSYS Fluent, was evaluated. Spray modeling was performed for various cold flow validation cases. These validation cases include a liquid jet in a cross-flow, an airblast atomizer, and a high shear fuel nozzle. Droplet properties including velocity and diameter were investigated and compared with previous experimental and numerical results. Different primary and secondary breakup models were evaluated in this thesis. The secondary breakup models investigated include the Taylor analogy breakup (TAB) model, the wave model, the Kelvin-Helmholtz Rayleigh-Taylor model (KHRT), and the Stochastic secondary droplet (SSD) approach. The modeling of fuel sprays requires a proper treatment for the turbulence. Reynolds-averaged Navier-Stokes (RANS), large eddy simulation (LES), hybrid RANS/LES, and dynamic LES (DLES) were also considered for the turbulent flows involving sprays. The spray and turbulence models were evaluated using the available benchmark experimental data.

Harlequin Duck population injury and recovery dynamics following the 1989 Exxon Valdez oil spill.

PubMed

Iverson, Samuel A; Esler, Daniel

2010-10-01

The 1989 Exxon Valdez oil spill caused significant injury to wildlife populations in Prince William Sound, Alaska, USA. Harlequin Ducks (Histrionicus histrionicus) were particularly vulnerable to the spill and have been studied extensively since, leading to one of the most thorough considerations of the consequences of a major oil spill ever undertaken. We compiled demographic and survey data collected since the spill to evaluate the timing and extent of mortality using a population model. During the immediate aftermath of the spill, we estimated a 25% decrease in Harlequin Duck numbers in oiled areas. Survival rates remained depressed in oiled areas 6-9 years after the spill and did not equal those from unoiled areas until at least 11-14 years later. Despite a high degree of site fidelity to wintering sites, immigration was important for recovery dynamics, as the relatively large number of birds from habitats outside the spill zone provided a pool of individuals to facilitate numerical increases. On the basis of these model inputs and assumptions about fecundity rates for the species, we projected a timeline to recovery of 24 years under the most-likely combination of variables, with a range of 16 to 32 years for the best-case and worst-case scenarios, respectively. Our results corroborate assertions from other studies that the effects of spilled oil on wildlife can be expressed over much longer time frames than previously assumed and that the cumulative mortality associated with chronic exposure to residual oil may actually exceed acute mortality, which has been the primary concern following most oil spills.

Potential for sea otter exposure to remnants of buried oil from the Exxon Valdez oil spill.

PubMed

Boehm, Paul D; Page, David S; Neff, Jerry M; Johnson, Charles B

2007-10-01

A study was conducted in 2005 and 2006 to examine the hypothesis that sea otters (Enhydra lutris) continue to be exposed to residues of subsurface oil (SSO) while foraging on shorelines in the northern Knight Island (NKI) area of Prince William Sound, Alaska more than 17 years after the Exxon Valdez oil spill. Forty-three shoreline segments, whose oiling history has been documented by prior surveys, were surveyed. These included all shoreline segments reported by a 2003 NOAA random site survey to contain SSO residues in NKI. Sites were surveyed for the presence and location of otter foraging pits. Only one of 29 SSO sites surveyed was identified as an otter foraging site. Most buried SSO residues are confined to tide elevations above +0.8 m above mean lower low water (MLLW), above the range of intertidal clam habitat. More than 99% of documented intertidal otter pits at all sites surveyed are in the lower intertidal zone (-0.2 to +0.8 m above MLLW), the zone of highest clam abundance. The spatial separation of the otter pits from the locations of SSO residues, both with regard to tidal elevation and lateral separation on the study sites, coupled with the lack of evidence of intertidal otter foraging at SSO sites indicates a low likelihood of exposure of foraging otters to SSO on the shores of the NKI area.

Acute and subchronic toxicity of naturally weathered Exxon Valdez crude oil in mallards and ferrets

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stubblefield, W.A.; Hancock, G.A.; Ford, W.H.

1995-11-01

The toxic properties of naturally weathered Exxon Valdez crude oil (WEVC) were assessed in a battery of acute and subchronic toxicity tests using mallards, Anas platyrhynchos, and European ferrets, Mustela putorius. Adult mallard acute oral toxicity study results indicated no mortalities or signs o toxicity, i.e., no-observed-adverse-effect level (NOAEL) and median lethal dose (LD50) > 5,000 mg/kg. Acute oral feeding and food avoidance tests with ducklings also indicated no toxicity (NOAEL and LC50 > 50,000 mg/kg diet) with no evidence of food avoidance (FAC50 > 20,000 mg/kg diet). No mortalities or toxic signs were noted in a 14-d feeding studymore » with adult birds at dietary concentrations up to 100,000 mg WEVC/kg diet. Among clinical and physiological end points evaluated, the only significant difference noted was an increase in liver: body weight ratios in the 100,000-mg WEVC/kg diet dose group. No differences in clinical chemistry or hematological parameters were noted, and there were no consistent differences in histological evaluations of organ tissues. Daily oral doses of up to 5,000 mg/kg of WEVC over 5 d resulted in minimal effects on ferrets. Increased serum albumin concentrations were observed in the 5,000-mg/kg dose group females and decreased spleen weights were noted in females of all WEVC treatment groups. No other significant observations were noted.« less

A Mobility Management Using Follow-Me Cloud-Cloudlet in Fog-Computing-Based RANs for Smart Cities.

PubMed

Chen, Yuh-Shyan; Tsai, Yi-Ting

2018-02-06

Mobility management for supporting the location tracking and location-based service (LBS) is an important issue of smart city by providing the means for the smooth transportation of people and goods. The mobility is useful to contribute the innovation in both public and private transportation infrastructures for smart cities. With the assistance of edge/fog computing, this paper presents a fully new mobility management using the proposed follow-me cloud-cloudlet (FMCL) approach in fog-computing-based radio access networks (Fog-RANs) for smart cities. The proposed follow-me cloud-cloudlet approach is an integration strategy of follow-me cloud (FMC) and follow-me edge (FME) (or called cloudlet). A user equipment (UE) receives the data, transmitted from original cloud, into the original edge cloud before the handover operation. After the handover operation, an UE searches for a new cloud, called as a migrated cloud, and a new edge cloud, called as a migrated edge cloud near to UE, where the remaining data is migrated from the original cloud to the migrated cloud and all the remaining data are received in the new edge cloud. Existing FMC results do not have the property of the VM migration between cloudlets for the purpose of reducing the transmission latency, and existing FME results do not keep the property of the service migration between data centers for reducing the transmission latency. Our proposed FMCL approach can simultaneously keep the VM migration between cloudlets and service migration between data centers to significantly reduce the transmission latency. The new proposed mobility management using FMCL approach aims to reduce the total transmission time if some data packets are pre-scheduled and pre-stored into the cache of cloudlet if UE is switching from the previous Fog-RAN to the serving Fog-RAN. To illustrate the performance achievement, the mathematical analysis and simulation results are examined in terms of the total transmission time, the

A Mobility Management Using Follow-Me Cloud-Cloudlet in Fog-Computing-Based RANs for Smart Cities

PubMed Central

Tsai, Yi-Ting

2018-01-01

Mobility management for supporting the location tracking and location-based service (LBS) is an important issue of smart city by providing the means for the smooth transportation of people and goods. The mobility is useful to contribute the innovation in both public and private transportation infrastructures for smart cities. With the assistance of edge/fog computing, this paper presents a fully new mobility management using the proposed follow-me cloud-cloudlet (FMCL) approach in fog-computing-based radio access networks (Fog-RANs) for smart cities. The proposed follow-me cloud-cloudlet approach is an integration strategy of follow-me cloud (FMC) and follow-me edge (FME) (or called cloudlet). A user equipment (UE) receives the data, transmitted from original cloud, into the original edge cloud before the handover operation. After the handover operation, an UE searches for a new cloud, called as a migrated cloud, and a new edge cloud, called as a migrated edge cloud near to UE, where the remaining data is migrated from the original cloud to the migrated cloud and all the remaining data are received in the new edge cloud. Existing FMC results do not have the property of the VM migration between cloudlets for the purpose of reducing the transmission latency, and existing FME results do not keep the property of the service migration between data centers for reducing the transmission latency. Our proposed FMCL approach can simultaneously keep the VM migration between cloudlets and service migration between data centers to significantly reduce the transmission latency. The new proposed mobility management using FMCL approach aims to reduce the total transmission time if some data packets are pre-scheduled and pre-stored into the cache of cloudlet if UE is switching from the previous Fog-RAN to the serving Fog-RAN. To illustrate the performance achievement, the mathematical analysis and simulation results are examined in terms of the total transmission time, the

Modeling of Fuel Film Cooling Using Steady State RANS and Unsteady DES Approaches

DTIC Science & Technology

2016-07-27

Briefing Charts 3. DATES COVERED (From - To) 21 July 2016 – 31 August 2016 4. TITLE AND SUBTITLE Modeling of Fuel Film Cooling Using Steady State RANS...Prescribed by ANSI Std. 239.18 1 Distribution A: Approved for Public Release; Distribution Unlimited. PA# 16391. Modeling of Fuel  Film  Cooling Using...Distribution Unlimited. PA# 16391. 3 Introduction • Fuel  film  cooling is critical for high performing boost engines  using the Oxygen Rich Staged

Clinical and clinical laboratory correlates in sea otters dying unexpectedly in rehabilitation centers following the Exxon Valdez oil spill

USGS Publications Warehouse

Rebar, A.H.; Lipscomb, T.P.; Harris, R.K.; Ballachey, Brenda E.

1995-01-01

Following the Exxon Valdez oil spill, 347 oiled sea otters (Enhydra lutris) were treated in rehabilitation centers. Of these, 116 died, 94 within 10 days of presentation. Clinical records of 21 otters dying during the first 10 days of rehabilitation were reviewed to define the laboratory abnormalities and clinical syndromes associated with these unexpected deaths. The most common terminal syndrome was shock characterized by hypothermia, lethargy, and often hemorrhagic diarrhea. In heavily and moderately oiled otters, shock developed within 48 hours of initial presentation, whereas in lightly oiled otters shock generally occurred during the second week of captivity. Accompanying laboratory abnormalities included leukopenia with increased numbers of immature neutrophils (degenerative left shift), lymphopenia, anemia, azotemia (primarily prerenal), hyperkalemia, hypoproteinemia/hypoalbuminemia, elevations of serum transaminases, and hypoglycemia. Shock associated with hemorrhagic diarrhea probably occurred either as a direct primary effect of oiling or as an indirect effect secondary to confinement and handling in the rehabilitation centers. Lightly oiled otters were less likely to die from shock than were heavily oiled otters (22% vs. 72%, respectively). Heavily oiled otters developed shock more rapidly and had greater numbers of laboratory abnormalities, suggesting that exposure to oil was an important contributing factor.

Sound Waste Management Plan environmental operations, and used oil management system: Restoration project 97115. Exxon Valdez oil spill restoration project final report: Volumes 1 and 2

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1998-06-01

This project constitutes Phase 2 of the Sound Waste Management Plan and created waste oil collection and disposal facilities, bilge water collection and disposal facilities, recycling storage, and household hazardous waste collection and storage, and household hazardous waste collection and storage facilities in Prince William Sound. A wide range of waste streams are generated within communities in the Sound including used oil generated from vehicles and vessels, and hazardous wastes generated by households. This project included the design and construction of Environmental Operations Stations buildings in Valdez, Cordova, Whittier, Chenega Bay and Tatitlek to improve the overall management of oilymore » wastes. They will house new equipment to facilitate oily waste collection, treatment and disposal. This project also included completion of used oil management manuals.« less

Assessment of Higher-Order RANS Closures in a Decelerated Planar Wall-Bounded Turbulent Flow

NASA Technical Reports Server (NTRS)

Jeyapaul, Elbert; Coleman, Gary N.; Rumsey, Christopher L.

2014-01-01

A reference DNS database is presented, which includes third- and fourth-order moment budgets for unstrained and strained planar channel flow. Existing RANS closure models for third- and fourth-order terms are surveyed, and new model ideas are introduced. The various models are then compared with the DNS data term by term using a priori testing of the higher-order budgets of turbulence transport, velocity-pressure-gradient, and dissipation for both the unstrained and strained databases. Generally, the models for the velocity-pressure-gradient terms are most in need of improvement.

RANS Simulation (Virtual Blade Model [VBM]) of Single Lab Scaled DOE RM1 MHK Turbine

DOE Data Explorer

Javaherchi, Teymour; Stelzenmuller, Nick; Aliseda, Alberto; Seydel, Joseph

2014-04-15

Attached are the .cas and .dat files for the Reynolds Averaged Navier-Stokes (RANS) simulation of a single lab-scaled DOE RM1 turbine implemented in ANSYS FLUENT CFD-package. The lab-scaled DOE RM1 is a re-design geometry, based of the full scale DOE RM1 design, producing same power output as the full scale model, while operating at matched Tip Speed Ratio values at reachable laboratory Reynolds number (see attached paper). In this case study the flow field around and in the wake of the lab-scaled DOE RM1 turbine is simulated using Blade Element Model (a.k.a Virtual Blade Model) by solving RANS equations coupled with k-\\omega turbulence closure model. It should be highlighted that in this simulation the actual geometry of the rotor blade is not modeled. The effect of turbine rotating blades are modeled using the Blade Element Theory. This simulation provides an accurate estimate for the performance of device and structure of it's turbulent far wake. Due to the simplifications implemented for modeling the rotating blades in this model, VBM is limited to capture details of the flow field in near wake region of the device. The required User Defined Functions (UDFs) and look-up table of lift and drag coefficients are included along with the .cas and .dat files.

Distribution, age, and sex composition of sea otter carcasses recovered during the response to the T/V Exxon Valdez oil spill

USGS Publications Warehouse

DeGange, Anthony R.; Lensink, Calvin J.; Bayha, Keith; Kormendy, Jennifer

1990-01-01

Nearly 900 sea otter (Enhydra lutris) carcasses were recovered in or adjacent to coastal areas affected by the T/V Exxon Valdez oil spill. The time of carcass recovery and the condition of carcasses indicate that most oil spill-induced mortality occurred early in the response period. In fact, by 19 May about 70% of the carcasses had been found. The majority of the carcasses (56%) were from Prince William Sound, suggesting that mortality was more acute there than in other geographic areas. Examination of the recovered carcasses indicated that more adult female sea otters were killed by the oil in Prince William Sound and along the Kenai Peninsula than other sex and age cohorts, reflecting greater abundance of adult females in those regions. Many of the adult females in those areas were pregnant or lactating. Pups made up a higher proportion of the carcasses collected in the western portion of the spill zone, reflecting the advanced pupping chronology at the time the search effort reached the Alaska Peninsula and the Kodiak Archipelago.

RANS Simulation (Rotating Reference Frame Model [RRF]) of Single Lab-Scaled DOE RM1 MHK Turbine

DOE Data Explorer

Javaherchi, Teymour; Stelzenmuller, Nick; Aliseda, Alberto; Seydel, Joseph

2014-04-15

Attached are the .cas and .dat files for the Reynolds Averaged Navier-Stokes (RANS) simulation of a single lab-scaled DOE RM1 turbine implemented in ANSYS FLUENT CFD-package. The lab-scaled DOE RM1 is a re-design geometry, based of the full scale DOE RM1 design, producing same power output as the full scale model, while operating at matched Tip Speed Ratio values at reachable laboratory Reynolds number (see attached paper). In this case study taking advantage of the symmetry of lab-scaled DOE RM1 geometry, only half of the geometry is models using (Single) Rotating Reference Frame model [RRF]. In this model RANS equations, coupled with k-\\omega turbulence closure model, are solved in the rotating reference frame. The actual geometry of the turbine blade is included and the turbulent boundary layer along the blade span is simulated using wall-function approach. The rotation of the blade is modeled by applying periodic boundary condition to sets of plane of symmetry. This case study simulates the performance and flow field in the near and far wake of the device at the desired operating conditions. The results of these simulations were validated against in-house experimental data. Please see the attached paper.

CFD-RANS prediction of individual exposure from continuous release of hazardous airborne materials in complex urban environments

NASA Astrophysics Data System (ADS)

Efthimiou, G. C.; Andronopoulos, S.; Bartzis, J. G.; Berbekar, E.; Harms, F.; Leitl, B.

2017-02-01

One of the key issues of recent research on the dispersion inside complex urban environments is the ability to predict individual exposure (maximum dosages) of an airborne material which is released continuously from a point source. The present work addresses the question whether the computational fluid dynamics (CFD)-Reynolds-averaged Navier-Stokes (RANS) methodology can be used to predict individual exposure for various exposure times. This is feasible by providing the two RANS concentration moments (mean and variance) and a turbulent time scale to a deterministic model. The whole effort is focused on the prediction of individual exposure inside a complex real urban area. The capabilities of the proposed methodology are validated against wind-tunnel data (CUTE experiment). The present simulations were performed 'blindly', i.e. the modeller had limited information for the inlet boundary conditions and the results were kept unknown until the end of the COST Action ES1006. Thus, a high uncertainty of the results was expected. The general performance of the methodology due to this 'blind' strategy is good. The validation metrics fulfil the acceptance criteria. The effect of the grid and the turbulence model on the model performance is examined.

The proliferation marker pKi-67 organizes the nucleolus during the cell cycle depending on Ran and cyclin B.

PubMed

Schmidt, Mirko H H; Broll, Rainer; Bruch, Hans-Peter; Bögler, Oliver; Duchrow, Michael

2003-01-01

The proliferation marker pKi-67 ('Ki-67 antigen') is commonly used in clinical and research pathology to detect proliferating cells, as it is only expressed during cell-cycle progression. Despite the fact that this antigen has been known for nearly two decades, there is still no adequate understanding of its function. This study has therefore identified proteins that interact with pKi-67, using a yeast two-hybrid system. A mammalian two-hybrid system and immunoprecipitation studies were used to verify these interactions. Among other cell-cycle regulatory proteins, two binding partners associated with the small GTPase Ran were identified. In addition, DNA-structural and nucleolus-associated proteins binding to pKi-67 were found. Moreover, it was demonstrated that the N-terminal domain of pKi-67 is capable of self-binding to its own repeat region encoded by exon 13. Since RanBP, a protein involved in the transport of macromolecules over the nuclear lamina, was found to be a binding partner, a possible effect of pKi-67 on the localization of cell-cycle regulatory proteins was proposed. To test this hypothesis, a tetracycline-responsive gene expression system was used to induce the pKi-67 fragments previously used for the two-hybrid screens in HeLa cells. Subsequent immunostaining revealed the translocation of cyclin B1 from cytoplasm to nucleoli in response to this expression. It is suggested that pKi-67 is a Ran-associated protein with a role in the disintegration and reformation of the nucleolus and thereby in entry into and exit from the M-phase. Copyright 2002 John Wiley & Sons, Ltd.

Numerical investigation of the vortex-induced vibration of an elastically mounted circular cylinder at high Reynolds number (Re = 104) and low mass ratio using the RANS code

PubMed Central

2017-01-01

This study numerically investigates the vortex-induced vibration (VIV) of an elastically mounted rigid cylinder by using Reynolds-averaged Navier–Stokes (RANS) equations with computational fluid dynamic (CFD) tools. CFD analysis is performed for a fixed-cylinder case with Reynolds number (Re) = 104 and for a cylinder that is free to oscillate in the transverse direction and possesses a low mass-damping ratio and Re = 104. Previously, similar studies have been performed with 3-dimensional and comparatively expensive turbulent models. In the current study, the capability and accuracy of the RANS model are validated, and the results of this model are compared with those of detached eddy simulation, direct numerical simulation, and large eddy simulation models. All three response branches and the maximum amplitude are well captured. The 2-dimensional case with the RANS shear–stress transport k-w model, which involves minimal computational cost, is reliable and appropriate for analyzing the characteristics of VIV. PMID:28982172

Numerical investigation of the vortex-induced vibration of an elastically mounted circular cylinder at high Reynolds number (Re = 104) and low mass ratio using the RANS code.

PubMed

Khan, Niaz Bahadur; Ibrahim, Zainah; Nguyen, Linh Tuan The; Javed, Muhammad Faisal; Jameel, Mohammed

2017-01-01

This study numerically investigates the vortex-induced vibration (VIV) of an elastically mounted rigid cylinder by using Reynolds-averaged Navier-Stokes (RANS) equations with computational fluid dynamic (CFD) tools. CFD analysis is performed for a fixed-cylinder case with Reynolds number (Re) = 104 and for a cylinder that is free to oscillate in the transverse direction and possesses a low mass-damping ratio and Re = 104. Previously, similar studies have been performed with 3-dimensional and comparatively expensive turbulent models. In the current study, the capability and accuracy of the RANS model are validated, and the results of this model are compared with those of detached eddy simulation, direct numerical simulation, and large eddy simulation models. All three response branches and the maximum amplitude are well captured. The 2-dimensional case with the RANS shear-stress transport k-w model, which involves minimal computational cost, is reliable and appropriate for analyzing the characteristics of VIV.

Recovery of intertidal hardshelled clams in Prince William Sound from Exxon Valdez oiling and shoreline treatments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Houghton, J.P.; Lees, D.C.; Driskell, W.B.

1994-12-31

Native little neck (Protothaca staminea) and butter clams (Saxidomus giganteus) were quantitatively surveyed from 1989 through 1993 to evaluate effects from the Exxon Valdez oil spill. Hydraulic washing of sand and gravel beaches altered beach morphology by transporting material down slope from upper elevations, often burying the lower beach in several centimeters of sediment having a relatively low content of fines and organic carbon. Hydraulically washed beaches showed significant reductions in clam densities in 1989 and 1990. Recruitment of clams was very limited on these beaches through 1993; as a result, clam densities on these hydraulically washed beaches remain verymore » depressed compared to those on beaches that were unoiled or oiled but not washed. Littlenecks transplanted from a reference site to a heavily oiled but untreated site showed significant patterns of increased mortality, decreased growth, and increased bioaccumulation of PAH in response to a gradient in sediment PAH, This same heavily oiled site has consistently had among the highest rates of hardshelled clam recruitment of any of the sites sampled. Littlenecks also were transplanted to another heavily oiled beach that had been hydraulically washed and had little remaining hydrocarbons. These clams showed very high survival, yet this beach has had very little clam recruitment. It is hypothesized that recruitment at this site may be inhibited by the low level of finer sediments and low organic content remaining after washing.« less

Galaxy evolution. Isolated compact elliptical galaxies: stellar systems that ran away.

PubMed

Chilingarian, Igor; Zolotukhin, Ivan

2015-04-24

Compact elliptical galaxies form a rare class of stellar system (~30 presently known) characterized by high stellar densities and small sizes and often harboring metal-rich stars. They were thought to form through tidal stripping of massive progenitors, until two isolated objects were discovered where massive galaxies performing the stripping could not be identified. By mining astronomical survey data, we have now found 195 compact elliptical galaxies in all types of environment. They all share similar dynamical and stellar population properties. Dynamical analysis for nonisolated galaxies demonstrates the feasibility of their ejection from host clusters and groups by three-body encounters, which is in agreement with numerical simulations. Hence, isolated compact elliptical and isolated quiescent dwarf galaxies are tidally stripped systems that ran away from their hosts. Copyright © 2015, American Association for the Advancement of Science.

Changes in the marine pollution management system in response to the Amorgos oil spill in Taiwan.

PubMed

Chiau, Wen-Yen

2005-01-01

The Marine Pollution Control Act (MPCA) of Taiwan was promulgated on November 1, 2000, with the specific aim of controlling marine pollution, safeguarding public health, and promoting the sustainable use of marine resources. In addition to land-based pollution, oil spills are one of the most significant threats to the local marine environment largely on account of the some 30,000 tankers which pass through Taiwan's coastal waters each year. In January 2001, two months after the enactment of this newly-introduced law, a Greek merchant vessel, the Amorgos ran aground in the vicinity of a national park on the southern tip of Taiwan, causing a serious oil spill and leading to considerable changes with regard to the marine pollution management system. The incident brought to the forefront many serious problems, such as a lack of experience, expertise as well as equipment required to respond to such disasters, as well as the ambiguous, unclear jurisdiction among related agencies. Thus, this paper reviews the incident of the Amorgos spill, identifies the major issues and lessons learned, and proposes several recommendations in an effort for Taiwan to further improve its marine pollution management system.

Differentiation and interchange of harlequin duck populations within the North Pacific. Restoration project 97161: Exxon Valdez oil spill restoration project -- Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Goatcher, B.; Zwiefelhofer, D.; Lanctot, R.

Concerns about constraints to harlequin duck (Histrionicus histrionicus) population recovery following the Exxon Valdez oil spill led biologists to ask whether birds in different molting and wintering areas belong to genetically distinct and, thus, demographically independent population segments. Genetic markers, which differed in mode of inheritance (two sex-linked Z-specific microsatellite loci, four biparentally inherited microsatellite loci and maternally inherited mitochondrial deoxyribonucleic acid sequences), were used to evaluate the degree of genetic differentiation among wintering areas within Prince William Sound, Alaska Peninsula (Katmai National Park) and Kodiak Archipelago (Kodiak National Wildlife Refuge). The authors also used colored leg bands to detectmore » population interchange within and among these regions. The authors` genetic results show that differences in genotype frequencies among wintering locations within Alaska were low and non-significant for all three classes of markers. An analysis of genetic samples collected throughout the West Coast of North America revealed significant structuring at larger geographic scales. No interchange of banded birds was observed among regions and movements within regions were uncommon.« less

Food limitation and the recovery of sea otters following the 'Exxon Valdez' oil spill

USGS Publications Warehouse

Dean, Thomas A.; Bodkin, James L.; Fukuyama, Allan K.; Jewett, Stephen C.; Monson, Daniel H.; O'Clair, Charles E.; VanBlaricom, Glenn R.

2002-01-01

We examined the potential role of food limitation in constraining the recovery of sea otters Enhydra lutris in Prince William Sound, Alaska, following the 'Exxon Valdez' oil spill. The spill resulted in the removal of a large number of sea otters in 1989, and as of 1998, the portion of the population in the heavily oiled northern Knight Island region had not fully recovered. Between 1996 and 1998, prey consumption rate was higher and the condition of sea otters was better at northern Knight Island than in an unoiled area of the sound (Montague Island). Estimates of prey energy available per unit mass of sea otter were about 4 times higher at Knight than Montague Island, albeit not significantly different between the 2 areas. Over this same period, the number of sea otters remained constant at northern Knight Island but increased at Montague Island. These data suggest that food was at least as abundant at Knight than at Montague Island, and that recovery of sea otters via intrinsic population growth was limited by factors other than food. However, the availability of food, the prey consumption rate, and the condition of sea otters were all much lower at both Knight and Montague Islands than in areas newly occupied by sea otters where the population growth rate was near the theoretical maximum. It is possible that the relatively short supply of food (compared to areas where sea otter population growth rate was high) may have inhibited immigration or interacted with other factors (e.g. oil-induced mortality or predation) to restrict sea otter population growth. Nonetheless, these data suggest that impacts of anthropogenic disturbances on large, often food-limited vertebrate predators can persist in spite of the availability of food resources that are sufficient for intrinsic population growth.

The interaction of RNA helicase DDX3 with HIV-1 Rev-CRM1-RanGTP complex during the HIV replication cycle

DOE PAGES

Mahboobi, Seyed Hanif; Javanpour, Alex A.; Mofrad, Mohammad R. K.

2015-02-27

Molecular traffic between the nucleus and the cytoplasm is regulated by the nuclear pore complex (NPC), which acts as a highly selective channel perforating the nuclear envelope in eukaryotic cells. The human immunodeficiency virus (HIV) exploits the nucleocytoplasmic pathway to export its RNA transcripts across the NPC to the cytoplasm. Despite extensive study on the HIV life cycle and the many drugs developed to target this cycle, no current drugs have been successful in targeting the critical process of viral nuclear export, even though HIV’s reliance on a single host protein, CRM1, to export its unspliced and partially spliced RNAmore » transcripts makes it a tempting target. Due to recent findings implicating a DEAD-box helicase, DDX3, in HIV replication and a member of the export complex, it has become an appealing target for anti-HIV drug inhibition. In the present research, we have applied a hybrid computational protocol to analyze protein-protein interactions in the HIV mRNA export cycle. This method is based on molecular docking followed by molecular dynamics simulation and accompanied by approximate free energy calculation (MM/GBSA), computational alanine scanning, clustering, and evolutionary analysis. We highlight here some of the most likely binding modes and interfacial residues between DDX3 and CRM1 both in the absence and presence of RanGTP. This work shows that although DDX3 can bind to free CRM1, addition of RanGTP leads to more concentrated distribution of binding modes and stronger binding between CRM1 and RanGTP.« less

The interaction of RNA helicase DDX3 with HIV-1 Rev-CRM1-RanGTP complex during the HIV replication cycle

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mahboobi, Seyed Hanif; Javanpour, Alex A.; Mofrad, Mohammad R. K.

Molecular traffic between the nucleus and the cytoplasm is regulated by the nuclear pore complex (NPC), which acts as a highly selective channel perforating the nuclear envelope in eukaryotic cells. The human immunodeficiency virus (HIV) exploits the nucleocytoplasmic pathway to export its RNA transcripts across the NPC to the cytoplasm. Despite extensive study on the HIV life cycle and the many drugs developed to target this cycle, no current drugs have been successful in targeting the critical process of viral nuclear export, even though HIV’s reliance on a single host protein, CRM1, to export its unspliced and partially spliced RNAmore » transcripts makes it a tempting target. Due to recent findings implicating a DEAD-box helicase, DDX3, in HIV replication and a member of the export complex, it has become an appealing target for anti-HIV drug inhibition. In the present research, we have applied a hybrid computational protocol to analyze protein-protein interactions in the HIV mRNA export cycle. This method is based on molecular docking followed by molecular dynamics simulation and accompanied by approximate free energy calculation (MM/GBSA), computational alanine scanning, clustering, and evolutionary analysis. We highlight here some of the most likely binding modes and interfacial residues between DDX3 and CRM1 both in the absence and presence of RanGTP. This work shows that although DDX3 can bind to free CRM1, addition of RanGTP leads to more concentrated distribution of binding modes and stronger binding between CRM1 and RanGTP.« less

Prediction of dosage-based parameters from the puff dispersion of airborne materials in urban environments using the CFD-RANS methodology

NASA Astrophysics Data System (ADS)

Efthimiou, G. C.; Andronopoulos, S.; Bartzis, J. G.

2018-02-01

One of the key issues of recent research on the dispersion inside complex urban environments is the ability to predict dosage-based parameters from the puff release of an airborne material from a point source in the atmospheric boundary layer inside the built-up area. The present work addresses the question of whether the computational fluid dynamics (CFD)-Reynolds-averaged Navier-Stokes (RANS) methodology can be used to predict ensemble-average dosage-based parameters that are related with the puff dispersion. RANS simulations with the ADREA-HF code were, therefore, performed, where a single puff was released in each case. The present method is validated against the data sets from two wind-tunnel experiments. In each experiment, more than 200 puffs were released from which ensemble-averaged dosage-based parameters were calculated and compared to the model's predictions. The performance of the model was evaluated using scatter plots and three validation metrics: fractional bias, normalized mean square error, and factor of two. The model presented a better performance for the temporal parameters (i.e., ensemble-average times of puff arrival, peak, leaving, duration, ascent, and descent) than for the ensemble-average dosage and peak concentration. The majority of the obtained values of validation metrics were inside established acceptance limits. Based on the obtained model performance indices, the CFD-RANS methodology as implemented in the code ADREA-HF is able to predict the ensemble-average temporal quantities related to transient emissions of airborne material in urban areas within the range of the model performance acceptance criteria established in the literature. The CFD-RANS methodology as implemented in the code ADREA-HF is also able to predict the ensemble-average dosage, but the dosage results should be treated with some caution; as in one case, the observed ensemble-average dosage was under-estimated slightly more than the acceptance criteria. Ensemble

Compressible Boundary Layer Predictions at High Reynolds Number using Hybrid LES/RANS Methods

NASA Technical Reports Server (NTRS)

Choi, Jung-Il; Edwards, Jack R.; Baurle, Robert A.

2008-01-01

Simulations of compressible boundary layer flow at three different Reynolds numbers (Re(sub delta) = 5.59x10(exp 4), 1.78x10(exp 5), and 1.58x10(exp 6) are performed using a hybrid large-eddy/Reynolds-averaged Navier-Stokes method. Variations in the recycling/rescaling method, the higher-order extension, the choice of primitive variables, the RANS/LES transition parameters, and the mesh resolution are considered in order to assess the model. The results indicate that the present model can provide good predictions of the mean flow properties and second-moment statistics of the boundary layers considered. Normalized Reynolds stresses in the outer layer are found to be independent of Reynolds number, similar to incompressible turbulent boundary layers.

Geomorphic factors related to the persistence of subsurface oil from the Exxon Valdez oil spill

USGS Publications Warehouse

Nixon, Zachary; Michel, Jacqueline; Hayes, Miles O.; Irvine, Gail V.; Short, Jeffrey

2013-01-01

Oil from the 1989 Exxon Valdez oil spill has persisted along shorelines of Prince William Sound, Alaska, for more than two decades as both surface and subsurface oil residues. To better understand the distribution of persistent subsurface oil and assess the potential need for further restoration, a thorough and quantitative understanding of the geomorphic factors controlling the presence or absence of subsurface oil is required. Data on oiling and geomorphic features were collected at 198 sites in Prince William Sound to identify and quantify the relationships among these geomorphic factors and the presence and absence of persistent subsurface oil. Geomorphic factors associated with the presence of subsurface oil were initial oil exposure, substrate permeability, topographic slope, low exposure to waves, armoring on gravel beaches, tombolos, natural breakwaters, and rubble accumulations. Geomorphic factors associated with the absence of subsurface oil were impermeable bedrock; platforms with thin sediment veneer; fine-grained, well-sorted gravel beaches with no armor; and low-permeability, raised bay-bottom beaches. Relationships were found between the geomorphic and physical site characteristics and the likelihood of encountering persistent subsurface oiling at those sites. There is quantitative evidence of more complex interactions between the overall wave energy incident at a site and the presence of fine-scale geomorphic features that may have provided smaller, local wave energy sheltering of oil. Similarly, these data provide evidence for interactions between the shoreline slope and the presence of angular rubble, with decreased likelihood for encountering subsurface oil at steeply sloped sites except at high-angle sheltered rubble shoreline locations. These results reinforce the idea that the interactions of beach permeability, stability, and site-specific wave exposure are key drivers for subsurface oil persistence in exposed and intermittently exposed mixed

LES, DNS and RANS for the analysis of high-speed turbulent reacting flows

NASA Technical Reports Server (NTRS)

Givi, Peyman; Taulbee, Dale B.; Adumitroaie, Virgil; Sabini, George J.; Shieh, Geoffrey S.

1994-01-01

The purpose of this research is to continue our efforts in advancing the state of knowledge in large eddy simulation (LES), direct numerical simulation (DNS), and Reynolds averaged Navier Stokes (RANS) methods for the computational analysis of high-speed reacting turbulent flows. In the second phase of this work, covering the period 1 Sep. 1993 - 1 Sep. 1994, we have focused our efforts on two research problems: (1) developments of 'algebraic' moment closures for statistical descriptions of nonpremixed reacting systems, and (2) assessments of the Dirichlet frequency in presumed scalar probability density function (PDF) methods in stochastic description of turbulent reacting flows. This report provides a complete description of our efforts during this past year as supported by the NASA Langley Research Center under Grant NAG1-1122.

Distribution and weathering of crude oil residues on shorelines 18 years after the Exxon Valdez spill.

PubMed

Boehm, Paul D; Page, David S; Brown, John S; Neff, Jerry M; Bragg, James R; Atlas, Ronald M

2008-12-15

In 2007, a systematic study was conducted to evaluate the form and location of residues of oil buried on Prince William Sound (PWS) shorelines, 18 years after the 1989 Exxon Valdez Oil Spill (EVOS). We took 678 sediment samples from 22 sites that were most heavily oiled in 1989 and known to contain the heaviest subsurface oil (SSO) deposits based on multiple studies conducted since 2001. An additional 66 samples were taken from two sites, both heavily oiled in 1989 and known to be active otter foraging sites. All samples were analyzed for total extractable hydrocarbons (TEH), and 25% were also analyzed for saturated and aromatic hydrocarbon weathering parameters. Over 90% of the samples from all sites contained light or no SSO at all. Of samples containing SSO, 81% showed total polycyclic aromatic hydrocarbon (TPAH) losses greater than 70%, relative to cargo oil, with most having >80% loss. Samples with SSO were observed in isolated patches sequestered by surface boulder and cobble armoring. Samples showing lowest TPAH loss correlated strongly with higher elevations in the intertidal zones. Of the 17 atypical, less-weathered samples having less than 70% loss of TPAH (>30% remaining), only two were found sequestered in the lower intertidal zone, both at a single site. Most of the EVOS oil in PWS has been eliminated due to natural weathering. Some isolated SSO residues remain because they are sequestered and only slowly affected by natural weathering processes that normally would bring about their rapid removal. Even where SSO patches remain, most are highly weathered, sporadically distributed at a small number of sites, and widely separated from biologically productive lower intertidal zones where most foraging by wildlife occurs.

A Review of distribution and quantity of lingering subsurface oil from the Exxon Valdez Oil Spill

NASA Astrophysics Data System (ADS)

Nixon, Zachary; Michel, Jacqueline

2018-01-01

Remaining lingering subsurface oil residues from the Exxon Valdez oil spill (EVOS) are, at present, patchily distributed across the geologically complex and spatially extensive shorelines of Prince William Sound and the Gulf of Alaska. We review and synthesize previous literature describing the causal geomorphic and physical mechanisms for persistence of oil in the intertidal subsurface sediments of these areas. We also summarize previous sampling and modeling efforts, and refine previously presented models with additional data to characterize the present-day linear and areal spatial extent, and quantity of lingering subsurface oil. In the weeks after the spill in March of 1989, approximately 17,750 t of oil were stranded along impacted shorelines, and by October of 1992, only 2% of the mass of spilled oil was estimated to remain in intertidal areas. We estimate that lingering subsurface residues, generally between 5 and 20 cm thick and sequestered below 10-20 cm of clean sediment, are present over 30 ha of intertidal area, along 11.4 km of shoreline, and represent approximately 227 t or 0.6% of the total mass of spilled oil. These residues are typically located in finer-grained sand and gravel sediments, often under an armor of cobble- or boulder-sized clasts, in areas with limited groundwater flow and porosity. Persistence of these residues is correlated with heavy initial oil loading together with localized sheltering from physical disturbance such as wave energy within the beach face. While no longer generally bioavailable and increasingly chemically weathered, present removal rates for these remaining subsurface oil residues have slowed to nearly zero. The only remaining plausible removal mechanisms will operate over time scales of decades.

What If You Ran Your Bookstore Like a Library? The Troubled Book Business Can Learn from Libraries' Willingness to Share

ERIC Educational Resources Information Center

Fister, Barbara

2008-01-01

Ten years ago, stories like "B&N: The New College Library" (LJ 2/1/98) and "What If You Ran Your Library Like a Bookstore?" (American Libraries, 3/98) kicked up a controversy about the viability of libraries. Ironically, these days it's the book business that has an aura of crisis and gloom, while visits to libraries are surging. Over two billion…

Aerodynamic Performance of an Active Flow Control Configuration Using Unstructured-Grid RANS

NASA Technical Reports Server (NTRS)

Joslin, Ronald D.; Viken, Sally A.

2001-01-01

This research is focused on assessing the value of the Reynolds-Averaged Navier-Stokes (RANS) methodology for active flow control applications. An experimental flow control database exists for a TAU0015 airfoil, which is a modification of a NACA0015 airfoil. The airfoil has discontinuities at the leading edge due to the implementation of a fluidic actuator and aft of mid chord on the upper surface. This paper documents two- and three-dimensional computational results for the baseline wing configuration (no control) with tile experimental results. The two-dimensional results suggest that the mid-chord discontinuity does not effect the aerodynamics of the wing and can be ignored for more efficient computations. The leading-edge discontinuity significantly affects tile lift and drag; hence, the integrity of the leading-edge notch discontinuity must be maintained in the computations to achieve a good match with the experimental data. The three-dimensional integrated performance results are in good agreement with the experiments inspite of some convergence and grid resolution issues.

An Evaluation of Recently Developed RANS-Based Turbulence Models for Flow Over a Two-Dimensional Block Subjected to Different Mesh Structures and Grid Resolutions

NASA Astrophysics Data System (ADS)

Kardan, Farshid; Cheng, Wai-Chi; Baverel, Olivier; Porté-Agel, Fernando

2016-04-01

Understanding, analyzing and predicting meteorological phenomena related to urban planning and built environment are becoming more essential than ever to architectural and urban projects. Recently, various version of RANS models have been established but more validation cases are required to confirm their capability for wind flows. In the present study, the performance of recently developed RANS models, including the RNG k-ɛ , SST BSL k-ω and SST ⪆mma-Reθ , have been evaluated for the flow past a single block (which represent the idealized architecture scale). For validation purposes, the velocity streamlines and the vertical profiles of the mean velocities and variances were compared with published LES and wind tunnel experiment results. Furthermore, other additional CFD simulations were performed to analyze the impact of regular/irregular mesh structures and grid resolutions based on selected turbulence model in order to analyze the grid independency. Three different grid resolutions (coarse, medium and fine) of Nx × Ny × Nz = 320 × 80 × 320, 160 × 40 × 160 and 80 × 20 × 80 for the computational domain and nx × nz = 26 × 32, 13 × 16 and 6 × 8, which correspond to number of grid points on the block edges, were chosen and tested. It can be concluded that among all simulated RANS models, the SST ⪆mma-Reθ model performed best and agreed fairly well to the LES simulation and experimental results. It can also be concluded that the SST ⪆mma-Reθ model provides a very satisfactory results in terms of grid dependency in the fine and medium grid resolutions in both regular and irregular structure meshes. On the other hand, despite a very good performance of the RNG k-ɛ model in the fine resolution and in the regular structure grids, a disappointing performance of this model in the coarse and medium grid resolutions indicates that the RNG k-ɛ model is highly dependent on grid structure and grid resolution. These quantitative validations are essential

Prediction of an internal boundary layer on a flat plate after a step change in roughness using a near-wall RANS model

NASA Astrophysics Data System (ADS)

Chu, Minghan; Meng, Fanxiao; Bergstrom, Donald J.

2017-11-01

An in-house computational fluid dynamics code was used to simulate turbulent flow over a flat plate with a step change in roughness, exhibiting a smooth-rough-smooth configuration. An internal boundary layer (IBL) is formed at the transition from the smooth to rough (SR) and then the rough to smooth (RS) surfaces. For an IBL the flow far above the surface has experienced a wall shear stress that is different from the local value. Within a Reynolds-Averaged-Navier-Stokes (RANS) formulation, the two-layer k- ɛ model of Durbin et al. (2001) was implemented to analyze the response of the flow to the change in surface condition. The numerical results are compared to experimental data, including some in-house measurements and the seminal work of Antonia and Luxton (1971,72). This problem captures some aspects of roughness in industrial and environmental applications, such as corrosion and the earth's surface heterogeneity, where the roughness is often encountered as discrete distributions. It illustrates the challenge of incorporating roughness models in RANS that are capable of responding to complex surface roughness profiles.

Gene transcript profiling in sea otters post-Exxon Valdez oil spill: A tool for marine ecosystem health assessment

USGS Publications Warehouse

Bowen, Lizabeth; Miles, A. Keith; Ballachey, Brenda E.; Waters, Shannon C.; Bodkin, James L.

2016-01-01

Using a panel of genes stimulated by oil exposure in a laboratory study, we evaluated gene transcription in blood leukocytes sampled from sea otters captured from 2006–2012 in western Prince William Sound (WPWS), Alaska, 17–23 years after the 1989 Exxon Valdez oil spill (EVOS). We compared WPWS sea otters to reference populations (not affected by the EVOS) from the Alaska Peninsula (2009), Katmai National Park and Preserve (2009), Clam Lagoon at Adak Island (2012), Kodiak Island (2005) and captive sea otters in aquaria. Statistically, sea otter gene transcript profiles separated into three distinct clusters: Cluster 1, Kodiak and WPWS 2006–2008 (higher relative transcription); Cluster 2, Clam Lagoon and WPWS 2010–2012 (lower relative transcription); and Cluster 3, Alaska Peninsula, Katmai and captive sea otters (intermediate relative transcription). The lower transcription of the aryl hydrocarbon receptor (AHR), an established biomarker for hydrocarbon exposure, in WPWS 2010–2012 compared to earlier samples from WPWS is consistent with declining hydrocarbon exposure, but the pattern of overall low levels of transcription seen in WPWS 2010–2012 could be related to other factors, such as food limitation, pathogens or injury, and may indicate an inability to mount effective responses to stressors. Decreased transcriptional response across the entire gene panel precludes the evaluation of whether or not individual sea otters show signs of exposure to lingering oil. However, related studies on sea otter demographics indicate that by 2012, the sea otter population in WPWS had recovered, which indicates diminishing oil exposure.

Structural characterization of recombinant IAV polymerase reveals a stable complex between viral PA-PB1 heterodimer and host RanBP5.

PubMed

Swale, Christopher; Monod, Alexandre; Tengo, Laura; Labaronne, Alice; Garzoni, Frédéric; Bourhis, Jean-Marie; Cusack, Stephen; Schoehn, Guy; Berger, Imre; Ruigrok, Rob W H; Crépin, Thibaut

2016-04-20

The genome of influenza A virus (IAV) comprises eight RNA segments (vRNA) which are transcribed and replicated by the heterotrimeric IAV RNA-dependent RNA-polymerase (RdRp). RdRp consists of three subunits (PA, PB1 and PB2) and binds both the highly conserved 3'- and 5'-ends of the vRNA segment. The IAV RdRp is an important antiviral target, but its structural mechanism has remained largely elusive to date. By applying a polyprotein strategy, we produced RdRp complexes and define a minimal human IAV RdRp core complex. We show that PA-PB1 forms a stable heterodimeric submodule that can strongly interact with 5'-vRNA. In contrast, 3'-vRNA recognition critically depends on the PB2 N-terminal domain. Moreover, we demonstrate that PA-PB1 forms a stable and stoichiometric complex with host nuclear import factor RanBP5 that can be modelled using SAXS and we show that the PA-PB1-RanPB5 complex is no longer capable of 5'-vRNA binding. Our results provide further evidence for a step-wise assembly of IAV structural components, regulated by nuclear transport mechanisms and host factor binding.

RANS study of flow Characteristics Over flight deck of Simplified frigate Ship

NASA Astrophysics Data System (ADS)

Shukla, Shrish; Singh, Sidh Nath; Srinivasan, Balaji

2014-11-01

The combined operation of a ship and helicopter is ubiquitous in every naval organization. The operation of ship with the landing and takeoff of a helicopter over sea results in very complex flow phenomena due to presence of ship air wakes, strong velocity gradients and widely varying turbulence length scales. This complexity of flow is increased with the addition of helicopter downwash during landing and takeoff. The resultant flow is therefore very complicated and accurate prediction represents a computational challenge. We present Reynolds-averaged-Navier-Stokes (RANS) of turbulent flow over a simple frigate ship to gain insight into the flow phenomena over a flight deck. Flow conditions analysis is carried out numerically over the generic simplified frigate ship. Profiles of mean velocity across longitudinal and transverse plane have been analyzed along the ship. Further, we propose some design modifications in order to reduce pilot load and increase the ship helicopter operation limit (SHOL). Computational results for these modified designs are also presented and their efficacy in reducing the turbulence levels and recirculation zone in the ship air wakes is discussed. Graduate student.

Testing of RANS Turbulence Models for Stratified Flows Based on DNS Data

NASA Technical Reports Server (NTRS)

Venayagamoorthy, S. K.; Koseff, J. R.; Ferziger, J. H.; Shih, L. H.

2003-01-01

In most geophysical flows, turbulence occurs at the smallest scales and one of the two most important additional physical phenomena to account for is strati cation (the other being rotation). In this paper, the main objective is to investigate proposed changes to RANS turbulence models which include the effects of stratifi- cation more explicitly. These proposed changes were developed using a DNS database on strati ed and sheared homogenous turbulence developed by Shih et al. (2000) and are described more fully in Ferziger et al. (2003). The data generated by Shih, et al. (2000) (hereinafter referred to as SKFR) are used to study the parameters in the k- model as a function of the turbulent Froude number, Frk. A modified version of the standard k- model based on the local turbulent Froude number is proposed. The proposed model is applied to a stratified open channel flow, a test case that differs significantly from the flows from which the modified parameters were derived. The turbulence modeling and results are discussed in the next two sections followed by suggestions for future work.

A Synthesis of Hybrid RANS/LES CFD Results for F-16XL Aircraft Aerodynamics

NASA Technical Reports Server (NTRS)

Luckring, James M.; Park, Michael A.; Hitzel, Stephan M.; Jirasek, Adam; Lofthouse, Andrew J.; Morton, Scott A.; McDaniel, David R.; Rizzi, Arthur M.

2015-01-01

A synthesis is presented of recent numerical predictions for the F-16XL aircraft flow fields and aerodynamics. The computational results were all performed with hybrid RANS/LES formulations, with an emphasis on unsteady flows and subsequent aerodynamics, and results from five computational methods are included. The work was focused on one particular low-speed, high angle-of-attack flight test condition, and comparisons against flight-test data are included. This work represents the third coordinated effort using the F-16XL aircraft, and a unique flight-test data set, to advance our knowledge of slender airframe aerodynamics as well as our capability for predicting these aerodynamics with advanced CFD formulations. The prior efforts were identified as Cranked Arrow Wing Aerodynamics Project International, with the acronyms CAWAPI and CAWAPI-2. All information in this paper is in the public domain.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wolfe, D.A.

Three separate papers are represented in this final report; Toxicity of intertidal and subtidal sediments contaminated by the Exxon Valdez oil spill; Comparative toxicities of polar and non-polar organic fractions from sediments affected by the Exxon Valdez oil spill in Prince William Sound, Alaska; and Fate of the oil spilled from the T/V Exxon Valdez in Prince William Sound, Alaska.

Geochemical reanalysis of historical U.S. Geological Survey sediment samples from the Tonsina area, Valdez Quadrangle, Alaska

USGS Publications Warehouse

Werdon, Melanie B.; Granitto, Matthew; Azain, Jaime S.

2015-01-01

The State of Alaska’s Strategic and Critical Minerals (SCM) Assessment project, a State-funded Capital Improvement Project (CIP), is designed to evaluate Alaska’s statewide potential for SCM resources. The SCM Assessment is being implemented by the Alaska Division of Geological & Geophysical Surveys (DGGS), and involves obtaining new airborne-geophysical, geological, and geochemical data. As part of the SCM Assessment, thousands of historical geochemical samples from DGGS, U.S. Geological Survey (USGS), and U.S. Bureau of Mines archives are being reanalyzed by DGGS using modern, quantitative, geochemical-analytical methods. The objective is to update the statewide geochemical database to more clearly identify areas in Alaska with SCM potential. The USGS is also undertaking SCM-related geologic studies in Alaska through the federally funded Alaska Critical Minerals cooperative project. DGGS and USGS share the goal of evaluating Alaska’s strategic and critical minerals potential and together created a Letter of Agreement (signed December 2012) and a supplementary Technical Assistance Agreement (#14CMTAA143458) to facilitate the two agencies’ cooperative work. Under these agreements, DGGS contracted the USGS in Denver to reanalyze historical USGS sediment samples from Alaska. For this report, DGGS funded reanalysis of 128 historical USGS sediment samples from the statewide Alaska Geochemical Database Version 2.0 (AGDB2; Granitto and others, 2013). Samples were chosen from the Tonsina area in the Chugach Mountains, Valdez quadrangle, Alaska (fig. 1). The USGS was responsible for sample retrieval from the National Geochemical Sample Archive (NGSA) in Denver, Colorado through the final quality assurance/quality control (QA/QC) of the geochemical analyses obtained through the USGS contract lab. The new geochemical data are published in this report as a coauthored DGGS report, and will be incorporated into the statewide geochemical databases of both agencies

Detection of sea otters in boat-based surveys of Prince William Sound, Alaska. Marine mammal study 6-19. Exxon Valdez oil spill state/federal natural resource damage assessment final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Udevitz, M.S.; Bodkin, J.L.; Costa, D.P.

1995-05-01

Boat-based surveys were used to monitor the Prince William Sound sea otter population before and after the Exxon Valdez oil spill. Population and loss estimates could be obtained from these surveys by direct expansion from the counts in the surveyed transects under the assumption that all otters in those transects were observed. The authors conducted a pilot study using ground-based observers in conjunction with the August 1990 survey of marine mammals and birds to investigate the validity of this assumption. The proportion of otters detected by boat crews was estimated by comparing boat and ground-based observations on 22 segments ofmore » shoreline transects. Overall, the authors estimated that only 70% of the otters in surveyed shoreline transects were detected by the boat crews. These results suggest that unadjusted expansions of boat survey transect counts will underestimate sea otter population size and that loss estimates based on comparisons of unadjusted population estimates will be biased.« less

RANS modeling of scalar dispersion from localized sources within a simplified urban-area model

NASA Astrophysics Data System (ADS)

Rossi, Riccardo; Capra, Stefano; Iaccarino, Gianluca

2011-11-01

The dispersion of a passive scalar downstream a localized source within a simplified urban-like geometry is examined by means of RANS scalar flux models. The computations are conducted under conditions of neutral stability and for three different incoming wind directions (0°, 45°, 90°) at a roughness Reynolds number of Ret = 391. A Reynolds stress transport model is used to close the flow governing equations whereas both the standard eddy-diffusivity closure and algebraic flux models are employed to close the transport equation for the passive scalar. The comparison with a DNS database shows improved reliability from algebraic scalar flux models towards predicting both the mean concentration and the plume structure. Since algebraic flux models do not increase substantially the computational effort, the results indicate that the use of tensorial-diffusivity can be promising tool for dispersion simulations for the urban environment.

DOE Office of Scientific and Technical Information (OSTI.GOV)

O`Clair, C.E.; Short, J.W.; Rice, S.D.

Sediments were collected at ten locations in Prince William Sound in July 1993 to determine the geographical and bathymetric distribution of oil from the Exxon Valdez oil spill in the low intertidal zone and subtidal region. The authors sampled sediments at mean lower low water (0 m) and at five subtidal depths from 3 to 100 m. No Exxon Valdez oil was found in sediments at 0 m where the greatest mean intertidal concentration of total polynuclear aromatic hydrocarbons excluding perylene (54 ng/g) was observed at Moose Lips Bay. Subtidal sediments showed polynuclear aromatic hydrocarbon composition patterns similar to Exxonmore » Valdez oil at three sites, Herring Bay, Northwest Bay and Sleepy Bay. Contamination of sediments by Exxon Valdez oil reached a depth of 20 m at Northwest Bay and Sleepy Bay. In deep sediments (> or = 40 m) the authors found no evidence of weathered Exxon Valdez oil.« less

Steady RANS methodology for calculating pressure drop in an in-line molten salt compact crossflow heat exchanger

DOE PAGES

Carasik, Lane B.; Shaver, Dillon R.; Haefner, Jonah B.; ...

2017-08-21

We report the development of molten salt cooled reactors (MSR) and fluoride-salt cooled high temperature reactors (FHR) requires the use of advanced design tools for the primary heat exchanger design. Due to geometric and flow characteristics, compact (pitch to diameter ratios equal to or less than 1.25) heat exchangers with a crossflow flow arrangement can become desirable for these reactors. Unfortunately, the available experimental data is limited for compact tube bundles or banks in crossflow. Computational Fluid Dynamics can be used to alleviate the lack of experimental data in these tube banks. Previous computational efforts have been primarily focused onmore » large S/D ratios (larger than 1.4) using unsteady Reynolds averaged Navier-Stokes and Large Eddy Simulation frameworks. These approaches are useful, but have large computational requirements that make comprehensive design studies impractical. A CFD study was conducted with steady RANS in an effort to provide a starting point for future design work. The study was performed for an in-line tube bank geometry with FLiBe (LiF-BeF2), a frequently selected molten salt, as the working fluid. Based on the estimated pressure drops, the pressure and velocity distributions in the domain, an appropriate meshing strategy was determined and presented. Periodic boundaries in the spanwise direction transverse flow were determined to be an appropriate boundary condition for reduced computational domains. The domain size was investigated and a minimum of 2-flow channels for a domain is recommended to ensure the behavior is accounted for. Finally, the standard low Re κ-ε (Lien) turbulence model was determined to be the most appropriate for steady RANS of this case at the time of writing.« less

Steady RANS methodology for calculating pressure drop in an in-line molten salt compact crossflow heat exchanger

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carasik, Lane B.; Shaver, Dillon R.; Haefner, Jonah B.

We report the development of molten salt cooled reactors (MSR) and fluoride-salt cooled high temperature reactors (FHR) requires the use of advanced design tools for the primary heat exchanger design. Due to geometric and flow characteristics, compact (pitch to diameter ratios equal to or less than 1.25) heat exchangers with a crossflow flow arrangement can become desirable for these reactors. Unfortunately, the available experimental data is limited for compact tube bundles or banks in crossflow. Computational Fluid Dynamics can be used to alleviate the lack of experimental data in these tube banks. Previous computational efforts have been primarily focused onmore » large S/D ratios (larger than 1.4) using unsteady Reynolds averaged Navier-Stokes and Large Eddy Simulation frameworks. These approaches are useful, but have large computational requirements that make comprehensive design studies impractical. A CFD study was conducted with steady RANS in an effort to provide a starting point for future design work. The study was performed for an in-line tube bank geometry with FLiBe (LiF-BeF2), a frequently selected molten salt, as the working fluid. Based on the estimated pressure drops, the pressure and velocity distributions in the domain, an appropriate meshing strategy was determined and presented. Periodic boundaries in the spanwise direction transverse flow were determined to be an appropriate boundary condition for reduced computational domains. The domain size was investigated and a minimum of 2-flow channels for a domain is recommended to ensure the behavior is accounted for. Finally, the standard low Re κ-ε (Lien) turbulence model was determined to be the most appropriate for steady RANS of this case at the time of writing.« less

A rapid and low noise switch from RANS to WMLES on curvilinear grids with compressible flow solvers

NASA Astrophysics Data System (ADS)

Deck, Sébastien; Weiss, Pierre-Elie; Renard, Nicolas

2018-06-01

A turbulent inflow for a rapid and low noise switch from RANS to Wall-Modelled LES on curvilinear grids with compressible flow solvers is presented. It can be embedded within the computational domain in practical applications with WMLES grids around three-dimensional geometries in a flexible zonal hybrid RANS/LES modelling context. It relies on a physics-motivated combination of Zonal Detached Eddy Simulation (ZDES) as the WMLES technique together with a Dynamic Forcing method processing the fluctuations caused by a Zonal Immersed Boundary Condition describing roughness elements. The performance in generating a physically-sound turbulent flow field with the proper mean skin friction and turbulent profiles after a short relaxation length is equivalent to more common inflow methods thanks to the generation of large-scale streamwise vorticity by the roughness elements. Comparisons in a low Mach-number zero-pressure-gradient flat-plate turbulent boundary layer up to Reθ = 6 100 reveal that the pressure field is dominated by the spurious noise caused by the synthetic turbulence methods (Synthetic Eddy Method and White Noise injection), contrary to the new low-noise approach which may be used to obtain the low-frequency component of wall pressure and reproduce its intermittent nature. The robustness of the method is tested in the flow around a three-element airfoil with WMLES in the upper boundary layer near the trailing edge of the main element. In spite of the very short relaxation distance allowed, self-sustainable resolved turbulence is generated in the outer layer with significantly less spurious noise than with the approach involving White Noise. The ZDES grid count for this latter test case is more than two orders of magnitude lower than the Wall-Resolved LES requirement and a unique mesh is involved, which is much simpler than some multiple-mesh strategies devised for WMLES or turbulent inflow.

RANS Simulation (Virtual Blade Model [VBM]) of Array of Three Coaxial Lab Scaled DOE RM1 MHK Turbine with 5D Spacing

DOE Data Explorer

Javaherchi, Teymour

2016-06-08

Attached are the .cas and .dat files along with the required User Defined Functions (UDFs) and look-up table of lift and drag coefficients for the Reynolds Averaged Navier-Stokes (RANS) simulation of three coaxially located lab-scaled DOE RM1 turbine implemented in ANSYS FLUENT CFD-package. The lab-scaled DOE RM1 is a re-design geometry, based of the full scale DOE RM1 design, producing same power output as the full scale model, while operating at matched Tip Speed Ratio values at reachable laboratory Reynolds number (see attached paper). In this case study the flow field around and in the wake of the lab-scaled DOE RM1 turbines in a coaxial array is simulated using Blade Element Model (a.k.a Virtual Blade Model) by solving RANS equations coupled with k-\\omega turbulence closure model. It should be highlighted that in this simulation the actual geometry of the rotor blade is not modeled. The effect of turbine rotating blades are modeled using the Blade Element Theory. This simulation provides an accurate estimate for the performance of each device and structure of their turbulent far wake. The results of these simulations were validated against the developed in-house experimental data. Simulations for other turbine configurations are available upon request.

From DNS to RANS: A Multi-model workflow to understand the Influence of Hurricanes on Generating Turbidity Currents in the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Syvitski, J. P.; Arango, H.; Harris, C. K.; Meiburg, E. H.; Jenkins, C. J.; Auad, G.; Hutton, E.; Kniskern, T. A.; Radhakrishnan, S.

2016-12-01

A loosely coupled numerical workflow is developed to address land-sea pathways for sediment routing from terrestrial and coastal sources, across the continental shelf and ultimately down the continental slope canyon system of the northern Gulf of Mexico (GOM). Model simulations represent a range of environmental conditions that might lead to the generation of turbidity-currents. The workflow comprises: 1) A simulator for the water and sediment discharged from rivers into the GOM with WMBsedv2 with calibration using USGS and USACE gauged river data; 2) Domain grids and bathymetry (ETOPO2) for the ocean models and realistic seabed sediment texture grids (dbSEABED) for the sediment transport models; 3) A spectral wave action simulator (10 km resolution) (WaveWatch III) driven by GFDL - GFS winds; 4) A simulator for ocean dynamics (ROMS) forced with ECMWF ERA winds; 5) A simulator for seafloor resuspension and transport (CSTMS); 6) Simulators (HurriSlip) of seafloor failure and flow ignition locations for boundary input to a turbidity current model; and 7) A RANS turbidity current model (TURBINS) to route sediment flows down GOM canyons, providing estimates of bottom shear stresses. TURBINS was developed first as a DNS model and then converted to an LES model wherein a dynamic turbulence closure scheme was employed. Like most DNS to LES model comparisons (these being done by the UCSB team), turbulence scaling allowed for higher Re applications but were found still not capable of simulating field scale (GOM continental canyons) environments. The LES model was next converted to a non-hydrostatic RANS model capable of field scale applications but only with a daisy-chain approach to multiple model runs along the simulated canyon floor. These model adaptations allowed the workflow to be tested for the year 1-Oct-2007 to 30-Sep-2008 that included two domain Hurricanes (Ike and Gustav). The RANS-TURBINS employed further boundary simplifications on both sediment erosion and

The hybrid RANS/LES of partially premixed supersonic combustion using G/Z flamelet model

NASA Astrophysics Data System (ADS)

Wu, Jinshui; Wang, Zhenguo; Bai, Xuesong; Sun, Mingbo; Wang, Hongbo

2016-10-01

In order to describe partially premixed supersonic combustion numerically, G/Z flamelet model is developed and compared with finite rate model in hybrid RANS/LES simulation to study the strut-injection supersonic combustion flow field designed by the German Aerospace Center. A new temperature calculation method based on time-splitting method of total energy is introduced in G/Z flamelet model. Simulation results show that temperature predictions in partially premixed zone by G/Z flamelet model are more consistent with experiment than finite rate model. It is worth mentioning that low temperature reaction zone behind the strut is well reproduced. Other quantities such as average velocity and average velocity fluctuation obtained by developed G/Z flamelet model are also in good agreement with experiment. Besides, simulation results by G/Z flamelet also reveal the mechanism of partially premixed supersonic combustion by the analyses of the interaction between turbulent burning velocity and flow field.

The threats from oil spills: now, then, and in the future.

PubMed

Jernelöv, Arne

2010-01-01

The ongoing oil spill from the blown-out well by the name of Macondo, drilled by the ill-fated rig Deepwater Horizon, has many features in common with another blowout in the Mexican Gulf that happened three decades ago. Then the oil gushed out from the Ixtoc I well drilled by the Sedco 135-F semi-submersible rig. In the years between these catastrophes, the source and nature of oil spills have undergone large changes. Huge spills from tankers that ran aground or collided used to be what caught the headlines and caused large ecological damage. The number and size of such accidental spills have decreased significantly. Instead, spills from ageing, ill-maintained or sabotaged pipelines have increased, and places like Arctic Russia, the Niger Delta, and the northwestern Amazon have become sites of reoccurring oil pollution. As for blowouts, there is no clear trend with regard to the number of incidences or amounts of spilled oil, but deepwater blowouts are much harder to cap and thus tend to go on longer and result in the release of larger quantities of oil. Also, oil exploration and extraction is moving into ever-deeper water and into stormier and icier seas, increasing potential risks. The risk for reoccurring spills like the two huge Mexican Gulf ones is eminent and must be reduced.

A strong loss-of-function mutation in RAN1 results in constitution activation of the ethylene response pathway as well as a rosette-lethal phenotype

Treesearch

Keith Woeste; Joseph J. Kieber

2000-01-01

A recessive mutation was identified that constitutively activated the ethylene response pathway in Arabidopsis and resuited in a rosette-lethal phenotype. Positional cloning of the gene corresponding to this mutation revealed that it was allelic to responsive to antagonist1 (ran1), a mutation that causes seedlings to respond in a positive manner to what is normally a...

Comparison of pigeon guillemot, Cepphus columba, blood parameters from oiled and unoiled areas of Alaska eight years after the Exxon Valdez oil spill

USGS Publications Warehouse

Seiser, P.E.; Duffy, L.K.; McGuire, David A.; Roby, D.D.; Golet, Gregory H.; Litzow, Michael A.

2000-01-01

In 1997, we compared the haematological and plasma biochemical profiles among populations of pigeon guillemots, Cepphus columba, in areas oiled and not oiled by the 1989 Exxon Valdez oil spill (EVOS) that occurred in Prince William Sound (PWS), Alaska. Pigeon guillemot populations in PWS were injured by EVOS and have not returned to pre-spill levels. If oil contamination is limiting recovery of pigeon guillemots in PWS, then we expected that blood parameters of pigeon guillemots would differ between oiled and unoiled areas and that these differences would be consistent with either toxic responses or lower fitness. We collected blood samples from chicks at approximately 20 and 30 days after hatching. Physiological changes associated with chick growth were noted in several blood parameters. We found that only calcium and mean cell volume were significantly different between the chicks in oiled and unoiled areas. Despite these differences, blood biomarkers provided little evidence of continuing oil injury to pigeon guillemot chicks, eight years after the EVOS. Preliminary data from adults indicated elevated aspartate aminotransferase activity in the adults from the oiled area, which is consistent with hepatocellular injury. Because adults have greater opportunities for exposure to residual oil than nestlings, we recommend studies that fully evaluate the health of adults residing in oiled areas. (C) 2000 Elsevier Science Ltd.

RANS simulation of cavitation and hull pressure fluctuation for marine propeller operating behind-hull condition

NASA Astrophysics Data System (ADS)

Paik, Kwang-Jun; Park, Hyung-Gil; Seo, Jongsoo

2013-12-01

Simulations of cavitation flow and hull pressure fluctuation for a marine propeller operating behind a hull using the unsteady Reynolds-Averaged Navier-Stokes equations (RANS) are presented. A full hull body submerged under the free surface is modeled in the computational domain to simulate directly the wake field of the ship at the propeller plane. Simulations are performed in design and ballast draught conditions to study the effect of cavitation number. And two propellers with slightly different geometry are simulated to validate the detectability of the numerical simulation. All simulations are performed using a commercial CFD software FLUENT. Cavitation patterns of the simulations show good agreement with the experimental results carried out in Samsung CAvitation Tunnel (SCAT). The simulation results for the hull pressure fluctuation induced by a propeller are also compared with the experimental results showing good agreement in the tendency and amplitude, especially, for the first blade frequency.

An assessment of oil-spill effects on pink salmon populations following the Exxon Valdez oil spill. Part 2: Adults and escapement

DOE Office of Scientific and Technical Information (OSTI.GOV)

Maki, A.W.; Brannon, E.J.; Gilbertson, L.G.

1995-12-31

This paper presents results of a field program designed to monitor the status of wildstock pink salmon populations in Prince William Sound following the Exxon Valdez oil spill. Field counts of spawning salmon were conducted each year from 1989 through 1992 to test for spill effects o the distribution nd abundance of pink salmon adults spawning in selected streams in the southwestern portion of Prince William Sound, including streams from the most heavily oiled areas. Counts of whole-stream and intertidal escapement density were statistically compared for 40 study streams in 1989 and for a subset of those streams in successivemore » years. Measurements of residual hydrocarbons were made from stream-bed sediments to test for correlations with spawning behavior. Adult pink salmon in the postspill years of 1990 and 1991, progeny of the year classes considered most vulnerable to the oil spill, returned in high numbers, with the wildstock spawners exceeding their parent year returns. In 1989, adult returns reflected the relatively weak run for that year with a mean spawner density of 0.68 fish/m{sup 2} in reference streams and 0.69 fish/m{sup 2} in oiled streams. In 1990, mean escapement density for reference streams was 1.40 fish/m{sup 2} and 1.55 fish/m{sup 2} for oiled streams, indicating the strongest run of the four study years. Trends in polycyclic aromatic hydrocarbon (PAH) concentrations for the majority of oiled streams show a general decline from 1989 to background levels by 1990. 45 refs., 14 figs., 5 tabs.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

Once installed, the 'HindCast Player' HyperCard stack displays the spill trajectory of the EXXON Valdez oil spill in the Prince William Sound in March of 1989. The product, 'Exxon Valdez Hind Cast' contains one compressed file and one documentation file. The file containing the documentation is named 'Read.me', and the compressed file is named Exxon HindCasts'. The compressed folder contains a moov file called 'EXXON Valdez', a HyperCard Stack called, 'HindCast Player v/2', and Apples QuickTime(TM) extension file.

Lack of physiological responses to hydrocarbon accumulation by Mytilus trossulus after 3-4 years chronic exposure to spilled Exxon Valdez crude oil in Prince William Sound.

PubMed

Thomas, R E; Brodersen, C; Carls, M G; Babcock, M; Rice, S D

1999-01-01

Mussels, Mytilus trossulus, were sampled in 1992 and 1993 from beaches in Prince William Sound that had been oiled by the Exxon Valdez spill of March, 1989. At some of the oiled beaches, mussels were collected from beds overlying oiled sediments, and from bedrock adjacent to these beds. Mussels were also collected from beaches within the Sound that had not been impacted by the spill. Polynuclear aromatic hydrocarbon (PAH) concentrations in mussel tissue, physiological responses (byssal thread production, condition index, clearance rate, and glycogen content), were determined for each group of mussels. Total PAH concentrations in mussel tissue ranged from 0 to 6 micrograms g-1, and were significantly greater in mussels from oiled beds than those from reference beds. No significant differences were noted in byssal thread production, condition index, clearance rate, or glycogen content between oiled sample sites and reference sites. The lack of physiological response was surprising because mussels in this study were chronically exposed to PAH for 3-4 years, and none of the physiological responses measured appeared to be affected by that exposure. The lack of a physiological response suggests that chronically exposed mussels may develop a physiological tolerance to PAH, but we recognize that these measures may not have been sensitive enough to discriminate response from background noise.

Controls on accretion of flysch and melange belts at convergent margins: evidence from the Chugach Bay thrust and Iceworm melange, Chugach accretionary wedge, Alaska

USGS Publications Warehouse

Kusky, Timothy M.; Bradley, Dwight C.; Haeussler, Peter J.; Karl, Susan M.

1997-01-01

Controls on accretion of flysch and melange terranes at convergent margins are poorly understood. Southern Alaska's Chugach terrane forms the outboard accretionary margin of the Wrangellia composite terrane, and consists of two major lithotectonic units, including Triassic-Cretaceous melange of the McHugh Complex and Late Cretaceous flysch of the Valdez Group. The contact between the McHugh Complex and the Valdez Group on the Kenai Peninsula is a tectonic boundary between chaotically deformed melange of argillite, chert, greenstone, and graywacke of the McHugh Complex and a less chaotically deformed melange of argillite and graywacke of the Valdez Group. We assign the latter to a new, informal unit of formational rank, the Iceworm melange, and interpret it as a contractional fault zone (Chugach Bay thrust) along which the Valdez Group was emplaced beneath the McHugh Complex. The McHugh Complex had already been deformed and metamorphosed to prehnite-pumpellyite facies prior to formation of the Iceworm melange. The Chugach Bay thrust formed between 75 and 55 Ma, as shown by Campanian-Maastrichtian depositional ages of the Valdez Group, and fault-related fabrics in the Iceworm melange that are cut by Paleocene dikes. Motion along the Chugach Bay thrust thus followed Middle to Late Cretaceous collision (circa 90-100 Ma) of the Wrangellia composite terrane with North America. Collision related uplift and erosion of mountains in British Columbia formed a submarine fan on the Farallon plate, and we suggest that attempted subduction of this fan dramatically changed the subduction/accretion style within the Chugach accretionary wedge. We propose a model in which subduction of thinly sedimented plates concentrates shear strains in a narrow zone, generating melanges like the McHugh in accretionary complexes. Subduction of thickly sedimented plates allows wider distribution of shear strains to accommodate plate convergence, generating a more coherent accretionary style

Controls on accretion of flysch and mélange belts at convergent margins: Evidence from the Chugach Bay thrust and Iceworm mélange, Chugach accretionary wedge, Alaska

NASA Astrophysics Data System (ADS)

Kusky, Timothy M.; Bradley, Dwight C.; Haeussler, Peter J.; Karl, Sue

1997-12-01

Controls on accretion of flysch and mélange terranes at convergent margins are poorly understood. Southern Alaska's Chugach terrane forms the outboard accretionary margin of the Wrangellia composite terrane, and consists of two major lithotectonic units, including Triassic-Cretaceous mélange of the McHugh Complex and Late Cretaceous flysch of the Valdez Group. The contact between the McHugh Complex and the Valdez Group on the Kenai Peninsula is a tectonic boundary between chaotically deformed melange of argillite, chert, greenstone, and graywacke of the McHugh Complex and a less chaotically deformed mélange of argillite and graywacke of the Valdez Group. We assign the latter to a new, informal unit of formational rank, the Iceworm mélange, and interpret it as a contractional fault zone (Chugach Bay thrust) along which the Valdez Group was emplaced beneath the McHugh Complex. The McHugh Complex had already been deformed and metamorphosed to prehnite-pumpellyite facies prior to formation of the Iceworm mélange. The Chugach Bay thrust formed between 75 and 55 Ma, as shown by Campanian-Maastrichtian depositional ages of the Valdez Group, and fault-related fabrics in the Iceworm mélange that are cut by Paleocene dikes. Motion along the Chugach Bay thrust thus followed Middle to Late Cretaceous collision (circa 90-100 Ma) of the Wrangellia composite terrane with North America. Collision related uplift and erosion of mountains in British Columbia formed a submarine fan on the Farallon plate, and we suggest that attempted subduction of this fan dramatically changed the subduction/accretion style within the Chugach accretionary wedge. We propose a model in which subduction of thinly sedimented plates concentrates shear strains in a narrow zone, generating mélanges like the McHugh in accretionary complexes. Subduction of thickly sedimented plates allows wider distribution of shear strains to accommodate plate convergence, generating a more coherent accretionary style

On the suitability of steady RANS CFD for forced mixing ventilation at transitional slot Reynolds numbers.

PubMed

van Hooff, T; Blocken, B; van Heijst, G J F

2013-06-01

Accurate prediction of ventilation flow is of primary importance for designing a healthy, comfortable, and energy-efficient indoor environment. Since the 1970s, the use of computational fluid dynamics (CFD) has increased tremendously, and nowadays, it is one of the primary methods to assess ventilation flow in buildings. The most commonly used numerical approach consists of solving the steady Reynolds-averaged Navier-Stokes (RANS) equations with a turbulence model to provide closure. This article presents a detailed validation study of steady RANS for isothermal forced mixing ventilation of a cubical enclosure driven by a transitional wall jet. The validation is performed using particle image velocimetry (PIV) measurements for slot Reynolds numbers of 1000 and 2500. Results obtained with the renormalization group (RNG) k-ε model, a low-Reynolds k-ε model, the shear stress transport (SST) k-ω model, and a Reynolds stress model (RSM) are compared with detailed experimental data. In general, the RNG k-ε model shows the weakest performance, whereas the low-Re k-ε model shows the best agreement with the measurements. In addition, the influence of the turbulence model on the predicted air exchange efficiency in the cubical enclosure is analyzed, indicating differences up to 44% for this particular case. This article presents a detailed numerical study of isothermal forced mixing ventilation driven by a low-velocity (transitional) wall jet using steady computational fluid dynamics (CFD) simulations. It is shown that the numerically obtained room airflow patterns are highly dependent on the chosen turbulence model and large differences with experimentally obtained velocity fields can be present. The renormalization group (RNG) k-ε model, which is commonly used for room airflow modeling, shows the largest deviations from the measured velocities, indicating the care that must be taken when selecting a turbulence model for room airflow prediction. As a result of the

Possible connection between two Alaskan catastrophes occurring 25 yr apart (1964 and 1989)

USGS Publications Warehouse

Kvenvolden, K.A.; Carlson, P.R.; Threlkeld, C.N.; Warden, A.

1993-01-01

On March 24, 1989, the Exxon Valdez supertanker grounded on Bligh Reef, spilling North Slope crude oil into Prince william Sound, Alaska. Tracking the geochemical fate of this spilled oil has revealed, in addition to weathered products from the spill, minor oil residues on beaches from a distinctly different source. This probably was the Great Alaska Earthquake of March 27, 1964. This quake and the subsequent tsunami destroyed asphalt storage facilities at the old Valdez town site, spilling asphalt into Port Valdez fjord. From there the asphalt apparently advanced south into the sound. -from Authors

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sale, D.M.; Gibeaut, J.C.; Short, J.W.

Following the Exxon Valdez oil spill, sediment traps were deployed in nearshore subtidal areas of Prince William Sound, Alaska (PWS) to monitor particulate chemistry and mineralogy. Complemented by benthic sediment chemistry and core sample stratigraphy at the study sites, results were compared to historical trends and data from other Exxon Valdez studies. These results clearly indicate the transport of oil-laden sediments from oiled shorelines to adjacent subtidal sediments. The composition of hydrocarbons adsorbed to settling particulates at sites adjacent to oiled shorelines matched the PAH pattern of weathered Exxon Valdez crude oil.

Trends in sea otter population abundance in western Prince William Sound, Alaska: Progress toward recovery following the 1989 Exxon Valdez oil spill

USGS Publications Warehouse

Bodkin, James L.; Ballachey, Brenda E.; Esslinger, George G.

2011-01-01

Sea otters in western Prince William Sound (WPWS) and elsewhere in the Gulf of Alaska suffered widespread mortality as a result of oiling following the 1989 T/V Exxon Valdez oil spill. Following the spill, extensive efforts have been directed toward identifying and understanding long-term consequences of the spill and the process of recovery. We conducted annual aerial surveys of sea otter abundance from 1993 to 2009 (except for 2001 and 2006) in WPWS. We observed an increasing trend in population abundance at the scale of WPWS through 2000 at an average annual rate of 4 percent: however, at northern Knight Island where oiling was heaviest and sea otter mortality highest, no increase in abundance was evident by 2000. We continued to see significant increase in abundance at the scale of WPWS between 2001 and 2009, with an average annual rate of increase from 1993 to 2009 of 2.6 percent. We estimated the 2009 population size of WPWS to be 3,958 animals (standard error=653), nearly 2,000 animals more than the first post-spill estimate in 1993. Surveys since 2003 also have identified a significant increasing trend at the heavily oiled site in northern Knight Island, averaging about 25 percent annually and resulting in a 2009 estimated population size of 116 animals (standard error=19). Although the 2009 estimate for northern Knight Island remains about 30 percent less than the pre-spill estimate of 165 animals, we interpret this trend as strong evidence of a trajectory toward recovery of spill-affected sea otter populations in WPWS.

Simulating wind and marine hydrokinetic turbines with actuator lines in RANS and LES

NASA Astrophysics Data System (ADS)

Bachant, Peter; Wosnik, Martin

2015-11-01

As wind and marine hydrokinetic (MHK) turbine designs mature, focus is shifting towards improving turbine array layouts for maximizing overall power output, i.e., minimizing wake interference for axial-flow or horizontal-axis turbines, or taking advantage of constructive wake interaction for cross-flow or vertical-axis turbines. Towards this goal, an actuator line model (ALM) was developed to provide a computationally feasible method for simulating full turbine arrays inside Navier-Stokes models. The ALM predicts turbine loading with the blade element method combined with sub-models for dynamic stall and flow curvature. The open-source software is written as an extension library for the OpenFOAM CFD package, which allows the ALM body force to be applied to their standard RANS and LES solvers. Turbine forcing is also applied to volume of fluid (VOF) models, e.g., for predicting free surface effects on submerged MHK devices. An additional sub-model is considered for injecting turbulence model scalar quantities based on actuator line element loading. Results are presented for the simulation of performance and wake dynamics of axial- and cross-flow turbines and compared with moderate Reynolds number experiments and body-fitted mesh, blade-resolving CFD. Work supported by NSF-CBET grant 1150797.

47 CFR 22.880 - Information exchange.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 47 Telecommunication 2 2014-10-01 2014-10-01 false Information exchange. 22.880 Section 22.880...-Ground Radiotelephone Service Commercial Aviation Air-Ground Systems § 22.880 Information exchange. (a...-ground system licensee must provide the following information to the public safety/CII licensee at least...

47 CFR 22.880 - Information exchange.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 47 Telecommunication 2 2012-10-01 2012-10-01 false Information exchange. 22.880 Section 22.880...-Ground Radiotelephone Service Commercial Aviation Air-Ground Systems § 22.880 Information exchange. (a...-ground system licensee must provide the following information to the public safety/CII licensee at least...

47 CFR 22.880 - Information exchange.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 47 Telecommunication 2 2013-10-01 2013-10-01 false Information exchange. 22.880 Section 22.880...-Ground Radiotelephone Service Commercial Aviation Air-Ground Systems § 22.880 Information exchange. (a...-ground system licensee must provide the following information to the public safety/CII licensee at least...

47 CFR 22.880 - Information exchange.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 47 Telecommunication 2 2011-10-01 2011-10-01 false Information exchange. 22.880 Section 22.880...-Ground Radiotelephone Service Commercial Aviation Air-Ground Systems § 22.880 Information exchange. (a...-ground system licensee must provide the following information to the public safety/CII licensee at least...

A Quantitative Ecological Risk Assessment of the Toxicological Risks from Exxon Valdez Subsurface Oil Residues to Sea Otters at Northern Knight Island, Prince William Sound, Alaska

PubMed Central

Harwell, Mark A.; Gentile, John H.; Johnson, Charles B.; Garshelis, David L.; Parker, Keith R.

2010-01-01

A comprehensive, quantitative risk assessment is presented of the toxicological risks from buried Exxon Valdez subsurface oil residues (SSOR) to a subpopulation of sea otters (Enhydra lutris) at Northern Knight Island (NKI) in Prince William Sound, Alaska, as it has been asserted that this subpopulation of sea otters may be experiencing adverse effects from the SSOR. The central questions in this study are: could the risk to NKI sea otters from exposure to polycyclic aromatic hydrocarbons (PAHs) in SSOR, as characterized in 2001–2003, result in individual health effects, and, if so, could that exposure cause subpopulation-level effects? We follow the U.S. Environmental Protection Agency (USEPA) risk paradigm by: (a) identifying potential routes of exposure to PAHs from SSOR; (b) developing a quantitative simulation model of exposures using the best available scientific information; (c) developing scenarios based on calculated probabilities of sea otter exposures to SSOR; (d) simulating exposures for 500,000 modeled sea otters and extracting the 99.9% quantile most highly exposed individuals; and (e) comparing projected exposures to chronic toxicity reference values. Results indicate that, even under conservative assumptions in the model, maximum-exposed sea otters would not receive a dose of PAHs sufficient to cause any health effects; consequently, no plausible toxicological risk exists from SSOR to the sea otter subpopulation at NKI. PMID:20862194

Geomechanical Characterization and Stability Analysis of the Bedrock Underlying the Costa Concordia Cruise Ship

NASA Astrophysics Data System (ADS)

Dotta, Giulia; Gigli, Giovanni; Ferrigno, Federica; Gabbani, Giuliano; Nocentini, Massimiliano; Lombardi, Luca; Agostini, Andrea; Nolesini, Teresa; Casagli, Nicola

2017-09-01

The shipwreck of the Costa Concordia cruise ship, which ran aground on 13 January 2012 on the northwestern coast of Giglio Island (Italy), required continuous monitoring of the position and movement of the vessel to guarantee the security of workers and rescuers operating around and within the wreck and to support shipwreck removal operations. Furthermore, understanding the geomechanical properties and stability behaviour of the coastal rock mass and rocky seabed underlying the ship was of similar importance. To assess the stability conditions of the ship, a ground-based monitoring system was installed in front of the wreck. The network included a terrestrial laser scanner (TLS) device, which was used to perform remote semiautomatic geomechanical characterization of the observed rock mass. Using TLS survey techniques, three main discontinuity sets were identified in the granitic rock mass of Giglio Island. Furthermore, a multibeam bathymetric survey was used to qualitatively characterize the seabed. To integrate the processed TLS data and quantitatively describe the rock mass quality, a subsequent field survey was carried out to provide a rock mass geomechanical evaluation (from very good to moderate quality). Based on the acquired information, kinematic and stability analyses were performed to create a spatial prediction of rock failure mechanisms in the study area. The obtained kinematic hazard index values were generally low; only the plane failure index reached slightly higher values. The general stability of the rock mass was confirmed by the stability analysis, which yielded a high safety factor value (approximately 12).

77 FR 66599 - Environmental Management Site-Specific Advisory Board, Northern New Mexico

Federal Register 2010, 2011, 2012, 2013, 2014

2012-11-06

... Business Written Reports Report on EM SSAB Chairs' Meeting, Carlos Valdez and Manuel Pacheco, Vice-Chair... Business Consideration and Action on 2012 Self Evaluation (Section X. Bylaws), Carlos Valdez Other Items 2... seven days in advance of the meeting at the telephone number listed above. Written statements may be...

Changes in sea urchins and kelp following a reduction in sea otter density as a result of the Exxon Valdez oil spill

USGS Publications Warehouse

Dean, Thomas A.; Bodkin, James L.; Jewett, Stephen C.; Monson, Daniel H.; Jung, D.

2000-01-01

Interactions between sea otters Enhydra lutris, sea urchins Strongylocentrotus droebachiensis, and kelp were investigated following the reduction in sea otter density in Prince William Sound, Alaska, after the Exxon Valdez oil spill in 1989. At northern Knight Island, a heavily oiled portion of the sound, sea otter abundance was reduced by a minimum of 50% by the oil spill, and from 1995 through 1998 remained at an estimated 66% lower than in 1973. Where sea otter densities were reduced, there were proportionally more large sea urchins. However, except in some widely scattered aggregations, both density and biomass of sea urchins were similar in an area of reduced sea otter density compared with an area where sea otters remained about 10 times more abundant. Furthermore, there was no change in kelp abundance in the area of reduced sea otter density. This is in contrast to greatly increased biomass of sea urchins and greatly reduced kelp density observed following an approximate 90% decline in sea otter abundance in the western Aleutian Islands. The variation in community response to a reduction in sea otters may be related to the magnitude of the reduction and the non-linear response by sea urchins to changes in predator abundance. The number of surviving sea otters may have been high enough to suppress sea urchin populations in Prince William Sound, but not in the Aleutians. Alternatively, differences in response may have been due to differences in the frequency or magnitude of sea urchin recruitment. Densities of small sea urchins were much higher in the Aleutian system even prior to the reduction in sea otters, suggesting a higher rate of recruitment.

Sea otter population status and the process of recovery from the 1989 'Exxon Valdez' oil spill

USGS Publications Warehouse

Bodkin, James L.; Ballachey, Brenda E.; Dean, T.A.; Fukuyama, Allan K.; Jewett, S.C.; McDonald, L.; Monson, Daniel H.; O'Clair, Charles E.; VanBlaricom, G.R.

2002-01-01

Sea otter Enhydra lutris populations were severely affected by the 1989 'Exxon Valdez' oil spill in western Prince William Sound, AK, and had not fully recovered by 2000. Here we present results of population surveys and incorporate findings from related studies to identify current population status and factors affecting recovery. Between 1993 and 2000, the number of sea otters in the spill-area of Prince William Sound increased by about 600 to nearly 2700. However, at Knight Island, where oil exposure and sea otter mortality in 1989 was most severe, no increase has been observed. Sea otter reproduction was not impaired, and the age and sex composition of captured otters are consistent with both intrinsic reproduction and immigration contributing to recovery. However, low resighting rates of marked otters at Knight Island compared to an unoiled reference area, and high proportions of young otters in beach cast carcasses through 1998, suggest that the lack of recovery was caused by relatively poor survival or emigration of potential recruits. Significantly higher levels of cytochrome P4501A (CYP1A), a biomarker of hydrocarbons, were found in sea otters at Knight Island from 1996 to 1998 compared to unoiled Montague Island, implicating oil effects in the lack of recovery at Knight Island. Delayed recovery does not appear to be directly related to food limitation. Although food availability was relatively low at both oiled and unoiled areas, we detected significant increases in sea otter abundance only at Montague Island, a finding inconsistent with food as a principal limiting factor. Persistent oil in habitats and prey provides a source of continued oil exposure and, combined with relatively low prey densities, suggests a potential interaction between oil and food. However, sea otters foraged more successfully at Knight Island and young females were in better condition than those at Montague Island. We conclude that progress toward recovery of sea otters in Prince

47 CFR 80.89 - Unauthorized transmissions.

Code of Federal Regulations, 2010 CFR

2010-10-01

... in the following situations are not considered to be on land for the purposes of this paragraph: (1) Vessels which are aground due to a distress situation; (2) Vessels in drydock undergoing repairs; and (3... training exercises. (f) Transmit on frequencies or frequency bands not authorized on the current station...

Simulation of an Isolated Tiltrotor in Hover with an Unstructured Overset-Grid RANS Solver

NASA Technical Reports Server (NTRS)

Lee-Rausch, Elizabeth M.; Biedron, Robert T.

2009-01-01

An unstructured overset-grid Reynolds Averaged Navier-Stokes (RANS) solver, FUN3D, is used to simulate an isolated tiltrotor in hover. An overview of the computational method is presented as well as the details of the overset-grid systems. Steady-state computations within a noninertial reference frame define the performance trends of the rotor across a range of the experimental collective settings. Results are presented to show the effects of off-body grid refinement and blade grid refinement. The computed performance and blade loading trends show good agreement with experimental results and previously published structured overset-grid computations. Off-body flow features indicate a significant improvement in the resolution of the first perpendicular blade vortex interaction with background grid refinement across the collective range. Considering experimental data uncertainty and effects of transition, the prediction of figure of merit on the baseline and refined grid is reasonable at the higher collective range- within 3 percent of the measured values. At the lower collective settings, the computed figure of merit is approximately 6 percent lower than the experimental data. A comparison of steady and unsteady results show that with temporal refinement, the dynamic results closely match the steady-state noninertial results which gives confidence in the accuracy of the dynamic overset-grid approach.

Effect of RANS-Type Turbulence Models on Adiabatic Film Cooling Effectiveness over a Scaled Up Gas Turbine Blade Leading Edge Surface

NASA Astrophysics Data System (ADS)

Yepuri, Giridhara Babu; Talanki Puttarangasetty, Ashok Babu; Kolke, Deepak Kumar; Jesuraj, Felix

2016-06-01

Increasing the gas turbine inlet temperature is one of the key technologies in raising gas turbine engine power output. Film cooling is one of the efficient cooling techniques to cool the hot section components of a gas turbine engines in turn the turbine inlet temperature can be increased. This study aims at investigating the effect of RANS-type turbulence models on adiabatic film cooling effectiveness over a scaled up gas turbine blade leading edge surfaces. For the evaluation, five different two equation RANS-type turbulent models have been taken in consideration, which are available in the ANSYS-Fluent. For this analysis, the gas turbine blade leading edge configuration is generated using Solid Works. The meshing is done using ANSYS-Workbench Mesh and ANSYS-Fluent is used as a solver to solve the flow field. The considered gas turbine blade leading edge model is having five rows of film cooling circular holes, one at stagnation line and the two each on either side of stagnation line at 30° and 60° respectively. Each row has the five holes with the hole diameter of 4 mm, pitch of 21 mm arranged in staggered manner and has the hole injection angle of 30° in span wise direction. The experiments are carried in a subsonic cascade tunnel facility at heat transfer lab of CSIR-National Aerospace Laboratory with a Reynolds number of 1,00,000 based on leading edge diameter. From the Computational Fluid Dynamics (CFD) evaluation it is found that K-ɛ Realizable model gives more acceptable results with the experimental values, compared to the other considered turbulence models for this type of geometries. Further the CFD evaluated results, using K-ɛ Realizable model at different blowing ratios are compared with the experimental results.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Short, J.W.; Harris, P.M.

We sampled 32 locations during each of three sampling periods between 31 March through 8 May 1989 in Prince William Sound, Alaska, for hydrocarbons in seawater at depths of 1-m and 5-m following the grounding of the T/V Exxon Valdez on 24 March 1989. Samples were analyzed for 22 alkane and 43 polynuclear aromatic hydrocarbon (PAH) analytes. The results show that Exxon Valdez crude oil PAHs were available to subsurface marine fauna the first few weeks following grounding of the T/V Exxon Valdez, especially in near-shore, near-surface waters that are biologically productive. Measured PAH concentrations, however, were well below thosemore » acutely toxic to marine fauna.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

O`Clair, C.E.; Short, J.W.; Rice, S.D.

To determine the distribution of oil in subtidal sediments after the Exxon Valdez oil spill we sampled sediments at six depths (0, 3, 6, 20, 40 and 100 m) at 53 locations in Prince William Sound and the northern Gulf of Alaska from 1989 to 1991. Results are based on 1278 sediment samples analyzed by gas chromatography/mass spectrometry. In 1989, the oil concentration was greatest in the Sound at 0 m. Outside the Sound, Exxon Valdez oil occurred at Chugach Bay, Hallo Bay, Katmai Bay, and Windy Bay in 1989. Hydrocarbons often matched Exxon Valdez oil less closely, oil wasmore » more patchily distributed, and the oil concentration decreased in sediments after 1989.« less

Approach to Modeling Boundary Layer Ingestion Using a Fully Coupled Propulsion-RANS Model

NASA Technical Reports Server (NTRS)

Gray, Justin S.; Mader, Charles A.; Kenway, Gaetan K. W.; Martins, Joaquim R. R. A.

2017-01-01

Airframe-propulsion integration concepts that use boundary layer ingestion have the potential to reduce aircraft fuel burn. One concept that has been recently explored is NASA's Starc-ABL aircraft configuration, which offers the potential for 12% mission fuel burn reduction by using a turbo-electric propulsion system with an aft-mounted electrically driven boundary layer ingestion propulsor. This large potential for improved performance motivates a more detailed study of the boundary layer ingestion propulsor design, but to date, analyses of boundary layer ingestion have used uncoupled methods. These methods account for only aerodynamic effects on the propulsion system or propulsion system effects on the aerodynamics, but not both simultaneously. This work presents a new approach for building fully coupled propulsive-aerodynamic models of boundary layer ingestion propulsion systems. A 1D thermodynamic cycle analysis is coupled to a RANS simulation to model the Starc-ABL aft propulsor at a cruise condition and the effects variation in propulsor design on performance are examined. The results indicates that both propulsion and aerodynamic effects contribute equally toward the overall performance and that the fully coupled model yields substantially different results compared to uncoupled. The most significant finding is that boundary layer ingestion, while offering substantial fuel burn savings, introduces throttle dependent aerodynamics effects that need to be accounted for. This work represents a first step toward the multidisciplinary design optimization of boundary layer ingestion propulsion systems.

Predicting the flow & noise of a rotor in a turbulent boundary layer using an actuator disk -- RANS approach

NASA Astrophysics Data System (ADS)

Buono, Armand C.

The numerical method presented in this study attempts to predict the mean, non-uniform flow field upstream of a propeller partially immersed in a thick turbulent boundary layer with an actuator disk using CFD based on RANS in ANSYS FLUENT. Three different configurations, involving an infinitely thin actuator disk in the freestream (Configuration 1), an actuator disk near a wall with a turbulent boundary layer (Configuration 2), and an actuator disk with a hub near a wall with a turbulent boundary layer (Configuration 3), were analyzed for a variety of advance ratios ranging from J = 0.48 to J =1.44. CFD results are shown to be in agreement with previous works and validated with experimental data of reverse flow occurring within the boundary layer above the flat plate upstream of a rotor in the Virginia Tech's Stability Wind Tunnel facility. Results from Configuration 3 will be used in future aero-acoustic computations.

A Cultural Resources Reconnaissance Report for the Saipan Small Boat Harbor Study Area, Saipan, Commonwealth of the Northern Mariana Islands,

DTIC Science & Technology

1980-03-01

3 Expectations ........ .................... 7 ~8 RECONNAISSANCE SURVEY .................. Field Methods...Construction. . . 25 7. Remains of a Japanese Tugboat (Object 1) Aground Near the Small Boat Harbor Entrance .. ......... ... 26 8. The Remains of a Possible...acted as field assistant for the project. iT ’S vi .r ABSTRACT Members of the Pacific Studies Institute and Maritime Historian, Mr. Ronald Strong, of

Distribution and relative abundance of sea otters in south-central and south-western Alaska before or at the time of the T/V Exxon Valdez oil spill

USGS Publications Warehouse

DeGange, Anthony R.; Monson, Daniel H.; Irons, David B.; Robbins, C.M.; Douglas, David C.; Bayha, Keith; Kormendy, Jennifer

1990-01-01

Surveys of sea otters (Enhydra lutris) conducted before, immediately after, or at the time of the TA^ Exxon Valdez oil spill were used to guide otter capture efforts and assess the immediate effects of the spill. Shoreline counts (by boat) of sea otters in Prince William Sound in 1984 suggested that a minimum of 4,500 sea otters inhabited nearshore waters of Prince William Sound. Areas of highest density within the western portion of Prince William Sound included the Bainbridge Island area, Montague Island, Green Island, and Port Wells. About 1,330 sea otters were counted from helicopters along the coast of the Kenai Peninsula. Highest densities of sea otters were found along the western end of the Kenai Peninsula. At Kodiak Island, about 3,500 sea otters were counted in coastal surveys from helicopters. Highest densities of sea otters were found in Perenosa Bay in northern Afognak Island, and in waters between Afogneik, Kodiak, and Raspberry Islands. Along the Alaska Peninsula, about 6,500 sea otters were counted between Kamishak Bay and Unimak Pass. Areas of concentration included the Izembek Lagoon airea. False Pass, the Pavlof Islands, Hallo Bay, and Kujulik Bay. Line transect surveys conducted offshore of the coastal strips indicate that at the time of the surveys relatively high densities of sea otters existed offshore at Kodiak Island and along the Alaska Peninsula, but not on the Kenai Peninsula.

Could residual oil from the Exxon Valdez spill create a long-term population "sink" for sea otters in Alaska?

USGS Publications Warehouse

Monson, Daniel H.; Doak, Daniel F.; Ballachey, Brenda E.; Bodkin, James L.

2011-01-01

Over 20 years ago, the Exxon Valdez oil tanker spilled 42 million L of crude oil into the waters of Prince William Sound, Alaska, USA. At the time of the spill, the sea otter (Enhydra lutris) population inhabiting the spill area suffered substantial acute injuries and loss. Subsequent research has resulted in one of the best-studied species responses to an oil spill in history. However, the question remains: Is the spill still influencing the Prince William Sound sea otter population? Here we fit time-varying population models to data for the sea otter population of western Prince William Sound to quantify the duration and extent of mortality effects from the spill. We hypothesize that the patchy nature of residual oil left in the environment has created a source-sink population dynamic. We fit models using the age distributions of both living and dying animals and estimates of sea otter population size to predict the number of sea otters in the hypothesized sink population and the number lost to this sink due to chronic exposure to residual oil. Our results suggest that the sink population has remained at just over 900 individuals (95% CI: 606-960) between 1990 and 2009, during which time prime-age survival remained 2-6% below pre-spill levels. This reduced survival led to chronic losses of ???900 animals over the past two decades, which is similar in magnitude to the number of sea otter deaths documented in western Prince William Sound during the acute phase of the spill. However, the unaffected source population appears to be counterbalancing these losses, with the model indicating that the sea otter population increased from ???2150 individuals in 1990 to nearly 3000 in 2009. The most optimistic interpretation of our results suggests that mortality effects dissipated between 2005 and 2007. Our results suggest that residual oil can affect wildlife populations on time scales much longer than previously believed and that cumulative chronic effects can be as

HIV Topical Microbicides: Steer the Ship or Run Aground

PubMed Central

Gross, Michael

2004-01-01

Six HIV candidate microbicides are scheduled to enter 6 large-scale effectiveness trials in the next year. The selection of products for testing and the design of this group of trials should be reconsidered to provide an answer to a key question now before the field: Does a sulfonated polyanion, delivered intravaginally as a gel, block HIV attachment to target cells with sufficient potency to protect women from sexually acquired HIV infection? Paradoxically, entering more candidates into more trials may confuse or compromise efforts to identify an effective product. Instead, a single trial of the most promising product(s) best serves the current candidates while also preserving resources needed to promptly advance innovative new protective concepts into future large-scale trials. PMID:15226123

Contrasting styles of sedimentation and deformation in the Chugach Terrane accretionary complex, south-central Alaska

NASA Astrophysics Data System (ADS)

Amato, J. M.; Pavlis, T. L.; Worthman, C.; Kochelek, E.; Day, E. M.; Clift, P. D.; Hecker, J.

2011-12-01

In southeast Alaska the Chugach terrane represents an accretionary complex associated with several arcs active at 200-65 Ma. This lithostratigraphic unit consists of blueschists with Early Jurassic metamorphic ages and uncertain depositional ages; the Jurassic-Cretaceous McHugh Complex; and the Late Cretaceous Valdez Group. Detrital zircon ages from densely sampled transects reveals patterns in the assembly of the complex. Blueschists are almost totally barren of zircon, suggesting protoliths derived from mafic-intermediate volcanic protoliths far from a continental source. There is an age gap between the blueschists and the McHugh complex interpreted to be caused by an episode of tectonic erosion. The McHugh Complex is two separate units that are lithologically and geochronologically distinct. The older McHugh is a melange is dominated by stratally disrupted volcanic rocks, chert, and argillite. The oldest McHugh rocks have maximum depositional ages (MDA) of 177-150 Ma at Seldovia and 157-145 Ma at Turnagain Arm; the lack of older rocks at Turnagain Arm suggests removal of structural section by faulting. The MDAs of the older McHugh rocks do not decrease progressively away from the arc. There is a 45 m.y. gap in MDA between the older McHugh and the Late Cretaceous McHugh rocks. The younger McHugh rocks are dominated by volcanogenic sandstone and coarse conglomerate and MDA decreases from 100 Ma near the boundary with the older McHugh mesomelange to 85 Ma near the Valdez Group. The Valdez Group consists of coherently bedded turbidites with a MDA range of 85-60 Ma that decreases progressively outboard of the arc source. A sample from the Orca Group of the Prince William terrane is lithologically similar to the Valdez Group and there is no gap in MDA between Valdez and Orca Groups. 55 Ma dikes cut the McHugh and Valdez Groups in the western Chugach and Kenai Mountains. The oldest units of the Chugach terrane are the most deformed, with deformation and metamorphism

Towards a Comprehensive Model of Jet Noise Using an Acoustic Analogy and Steady RANS Solutions

NASA Technical Reports Server (NTRS)

Miller, Steven A. E.

2013-01-01

An acoustic analogy is developed to predict the noise from jet flows. It contains two source models that independently predict the noise from turbulence and shock wave shear layer interactions. The acoustic analogy is based on the Euler equations and separates the sources from propagation. Propagation effects are taken into account by calculating the vector Green's function of the linearized Euler equations. The sources are modeled following the work of Tam and Auriault, Morris and Boluriaan, and Morris and Miller. A statistical model of the two-point cross-correlation of the velocity fluctuations is used to describe the turbulence. The acoustic analogy attempts to take into account the correct scaling of the sources for a wide range of nozzle pressure and temperature ratios. It does not make assumptions regarding fine- or large-scale turbulent noise sources, self- or shear-noise, or convective amplification. The acoustic analogy is partially informed by three-dimensional steady Reynolds-Averaged Navier-Stokes solutions that include the nozzle geometry. The predictions are compared with experiments of jets operating subsonically through supersonically and at unheated and heated temperatures. Predictions generally capture the scaling of both mixing noise and BBSAN for the conditions examined, but some discrepancies remain that are due to the accuracy of the steady RANS turbulence model closure, the equivalent sources, and the use of a simplified vector Green's function solver of the linearized Euler equations.

Humidity-dependent compression-induced glass transition of the air–water interfacial Langmuir films of poly(D,L-lactic acid- ran-glycolic acid) (PLGA)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, Hyun Chang; Lee, Hoyoung; Jung, Hyunjung

2015-08-26

Constant rate compression isotherms of the air–water interfacial Langmuir films of poly(D,L-lactic acid- ran-glycolic acid) (PLGA)show a distinct feature of an exponential increase in surface pressure in the high surface polymer concentration regime. We have previously demonstrated that this abrupt increase in surface pressure is linked to the glass transition of the polymer film, but the detailed mechanism of this process is not understood. In order to obtain a molecular-level understanding of this behavior, we performed extensive characterizations of the surface mechanical, structural and rheological properties of Langmuir PLGA films at the air–water interface, using combined experimental techniques including themore » Langmuir film balance, X-ray reflectivity and double-wall-ring interfacial rheometry methods.« less

The Use of Simulators in Rules of the Road Training

DTIC Science & Technology

2013-12-01

ships and total losses (collision, contact, fire/explosion, foundering, wrecked /stranded, hull/machinery, missing and other) (from Sampson et al...number of ships and total losses (collision, contact, fire/explosion, foundering, wrecked /stranded, hull/machinery, missing and other) (from Sampson...another vessel at night, it would be a vessel ___ _ o (a) aground (b) constrained by her draft o (c) dredging o (d) moored over a wreck Post

Quantifying population-level risks using an individual-based model: sea otters, Harlequin Ducks, and the Exxon Valdez oil spill.

PubMed

Harwell, Mark A; Gentile, John H; Parker, Keith R

2012-07-01

Ecological risk assessments need to advance beyond evaluating risks to individuals that are largely based on toxicity studies conducted on a few species under laboratory conditions, to assessing population-level risks to the environment, including considerations of variability and uncertainty. Two individual-based models (IBMs), recently developed to assess current risks to sea otters and seaducks in Prince William Sound more than 2 decades after the Exxon Valdez oil spill (EVOS), are used to explore population-level risks. In each case, the models had previously shown that there were essentially no remaining risks to individuals from polycyclic aromatic hydrocarbons (PAHs) derived from the EVOS. New sensitivity analyses are reported here in which hypothetical environmental exposures to PAHs were heuristically increased until assimilated doses reached toxicity reference values (TRVs) derived at the no-observed-adverse-effects and lowest-observed-adverse-effects levels (NOAEL and LOAEL, respectively). For the sea otters, this was accomplished by artificially increasing the number of sea otter pits that would intersect remaining patches of subsurface oil residues by orders of magnitude over actual estimated rates. Similarly, in the seaduck assessment, the PAH concentrations in the constituents of diet, sediments, and seawater were increased in proportion to their relative contributions to the assimilated doses by orders of magnitude over measured environmental concentrations, to reach the NOAEL and LOAEL thresholds. The stochastic IBMs simulated millions of individuals. From these outputs, frequency distributions were derived of assimilated doses for populations of 500,000 sea otters or seaducks in each of 7 or 8 classes, respectively. Doses to several selected quantiles were analyzed, ranging from the 1-in-1000th most-exposed individuals (99.9% quantile) to the median-exposed individuals (50% quantile). The resulting families of quantile curves provide the basis for

Exposure of sea otters and harlequin ducks in Prince William Sound, Alaska, USA, to shoreline oil residues 20 years after the Exxon Valdez oil spill.

PubMed

Neff, Jerry M; Page, David S; Boehm, Paul D

2011-03-01

We assessed whether sea otters and harlequin ducks in an area of western Prince William Sound, Alaska, USA (PWS), oiled by the 1989 Exxon Valdez oil spill (EVOS), are exposed to polycyclic aromatic hydrocarbons (PAH) from oil residues 20 years after the spill. Spilled oil has persisted in PWS for two decades as surface oil residues (SOR) and subsurface oil residues (SSOR) on the shore. The rare SOR are located primarily on the upper shore as inert, nonhazardous asphaltic deposits, and SSOR are confined to widely scattered locations as small patches under a boulder/cobble veneer, primarily on the middle and upper shore, in forms and locations that preclude physical contact by wildlife and diminish bioavailability. Sea otters and harlequin ducks consume benthic invertebrates that they collect by diving to the bottom in the intertidal and subtidal zones. Sea otters also dig intertidal and subtidal pits in search of clams. The three plausible exposure pathways are through the water, in oil-contaminated prey, or by direct contact with SSOR during foraging. Concentrations of PAH in near-shore water off oiled shores in 2002 to 2005 were at background levels (<0.05 ng/L). Median concentrations of PAH in five intertidal prey species on oiled shores in 2002 to 2008 range from 4.0 to 34 ng/g dry weight, indistinguishable from background concentrations. Subsurface oil residues are restricted to locations on the shore and substrate types, where large clams do not occur and where sea otters do not dig foraging pits. Therefore, that sea otters and harlequin ducks continue to be exposed to environmentally significant amounts of PAH from EVOS 20 years after the spill is not plausible. Copyright © 2010 SETAC.

Long-term effects of the 'Exxon Valdez' oil spill: Sea otter foraging in the intertidal as a pathway of exposure to lingering oil

USGS Publications Warehouse

Bodkin, James L.; Ballachey, Brenda E.; Coletti, Heather A.; Esslinger, George G.; Kloecker, Kimberly A.; Rice, Stanley D.; Reed, John; Monson, Daniel H.

2012-01-01

The protracted recovery of some bird and mammal populations in western Prince William Sound (WPWS), Alaska, and the persistence of spilled 'Exxon Valdez' oil in intertidal sediments, suggests a pathway of exposure to consumers that occupy nearshore habitats. To evaluate the hypothesis that sea otter (Enhydra lutris) foraging allows access to lingering oil, we contrast spatial relations between foraging behavior and documented oil distribution. We recovered archival time-depth recorders implanted in 19 sea otters in WPWS, where lingering oil and delayed ecosystem recovery are well documented. Sea otter foraging dives ranged from +2.7 to -92 m below sea level (MLLW), with intertidal accounting for 5 to 38% of all foraging. On average, female sea otters made 16050 intertidal dives per year and 18% of these dives were at depths above the +0.80 m tidal elevation. Males made 4100 intertidal dives per year and 26% of intertidal foraging took place at depths above the +0.80 m tidal elevation. Estimated annual oil encounter rates ranged from 2 to 24 times yr-1 for females, and 2 to 4 times yr-1 for males. Exposure rates increased in spring when intertidal foraging doubled and females were with small pups. In summer 2008, we found sea otter foraging pits on 13.5 of 24.8 km of intertidal shoreline surveyed. Most pits (82%) were within 0.5 m of the zero tidal elevation and 15% were above 0.5 m, the level above which most (65%) lingering oil remains. In August 2008, we detected oil above background concentrations in 18 of 41 (44%) pits excavated by sea otters on beaches with prior evidence of oiling, with total PAH concentrations up to 56000 ng g−1 dry weight. Our estimates of intertidal foraging, the widespread presence of foraging pits in the intertidal, and the presence of oil in and near sea otter foraging pits documents a pathway of exposure from lingering intertidal oil to sea otters foraging in WPWS.

Uncoupling phototoxicity-elicited neural dysmorphology and death by insidious function and selective impairment of Ran-binding protein 2 (Ranbp2).

PubMed

Cho, Kyoung-in; Haney, Victoria; Yoon, Dosuk; Hao, Yin; Ferreira, Paulo A

2015-12-21

Morphological disintegration of neurons is coupled invariably to neural death. In particular, disruption of outer segments of photoreceptor neurons triggers photoreceptor death regardless of the pathological stressors. We show that Ranbp2(-/-)::Tg-Ranbp2(CLDm-HA) mice with mutations in SUMO-binding motif (SBM) of cyclophilin-like domain (CLD) of Ran-binding protein 2 (Ranbp2) expressed in a null Ranbp2 background lack untoward effects in photoreceptors in the absence of light-stress. However, compared to wild type photoreceptors, light-stress elicits profound disintegration of outer segments of Ranbp2(-/-)::Tg-Ranbp2(CLDm-HA) with paradoxical age-dependent resistance of photoreceptors to death and genotype-independent activation of caspases. Ranbp2(-/-)::Tg-Ranbp2(CLDm-HA) exhibit photoreceptor death-independent changes in ubiquitin-proteasome system (UPS), but death-dependent increase of ubiquitin carrier protein 9(ubc9) levels. Hence, insidious functional impairment of SBM of Ranbp2's CLD promotes neuroprotection and uncoupling of photoreceptor degeneration and death against phototoxicity. Copyright © 2015 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Quantifying Population-Level Risks Using an Individual-Based Model: Sea Otters, Harlequin Ducks, and the Exxon Valdez Oil Spill

PubMed Central

Harwell, Mark A; Gentile, John H; Parker, Keith R

2012-01-01

Ecological risk assessments need to advance beyond evaluating risks to individuals that are largely based on toxicity studies conducted on a few species under laboratory conditions, to assessing population-level risks to the environment, including considerations of variability and uncertainty. Two individual-based models (IBMs), recently developed to assess current risks to sea otters and seaducks in Prince William Sound more than 2 decades after the Exxon Valdez oil spill (EVOS), are used to explore population-level risks. In each case, the models had previously shown that there were essentially no remaining risks to individuals from polycyclic aromatic hydrocarbons (PAHs) derived from the EVOS. New sensitivity analyses are reported here in which hypothetical environmental exposures to PAHs were heuristically increased until assimilated doses reached toxicity reference values (TRVs) derived at the no-observed-adverse-effects and lowest-observed-adverse-effects levels (NOAEL and LOAEL, respectively). For the sea otters, this was accomplished by artificially increasing the number of sea otter pits that would intersect remaining patches of subsurface oil residues by orders of magnitude over actual estimated rates. Similarly, in the seaduck assessment, the PAH concentrations in the constituents of diet, sediments, and seawater were increased in proportion to their relative contributions to the assimilated doses by orders of magnitude over measured environmental concentrations, to reach the NOAEL and LOAEL thresholds. The stochastic IBMs simulated millions of individuals. From these outputs, frequency distributions were derived of assimilated doses for populations of 500 000 sea otters or seaducks in each of 7 or 8 classes, respectively. Doses to several selected quantiles were analyzed, ranging from the 1-in-1000th most-exposed individuals (99.9% quantile) to the median-exposed individuals (50% quantile). The resulting families of quantile curves provide the basis for

Sandstone petrographic evidence and the Chugach-Prince William terrane boundary in southern Alaska

USGS Publications Warehouse

Dumoulin, Julie A.

1988-01-01

The contact between the Upper Cretaceous Valdez Group and the Paleocene and Eocene Orca Group has been inferred to be the boundary between the Chugach and the Prince William tectonostratigraphic terranes. Sandstone petrographic data from the Prince William Sound area show no compositional discontinuity across this contact. These data are best explained by considering the Valdez and Orca Groups to be part of a single terrane - a thick flysch sequence derived primarily from a progressively unroofing magmatic arc with increasing input from subduction-complex sources through time.

Proactive monitoring of an onshore wind farm through lidar measurements, SCADA data and a data-driven RANS solver

NASA Astrophysics Data System (ADS)

Iungo, Giacomo Valerio; Camarri, Simone; Ciri, Umberto; El-Asha, Said; Leonardi, Stefano; Rotea, Mario A.; Santhanagopalan, Vignesh; Viola, Francesco; Zhan, Lu

2016-11-01

Site conditions, such as topography and local climate, as well as wind farm layout strongly affect performance of a wind power plant. Therefore, predictions of wake interactions and their effects on power production still remain a great challenge in wind energy. For this study, an onshore wind turbine array was monitored through lidar measurements, SCADA and met-tower data. Power losses due to wake interactions were estimated to be approximately 4% and 2% of the total power production under stable and convective conditions, respectively. This dataset was then leveraged for the calibration of a data driven RANS (DDRANS) solver, which is a compelling tool for prediction of wind turbine wakes and power production. DDRANS is characterized by a computational cost as low as that for engineering wake models, and adequate accuracy achieved through data-driven tuning of the turbulence closure model. DDRANS is based on a parabolic formulation, axisymmetry and boundary layer approximations, which allow achieving low computational costs. The turbulence closure model consists in a mixing length model, which is optimally calibrated with the experimental dataset. Assessment of DDRANS is then performed through lidar and SCADA data for different atmospheric conditions. This material is based upon work supported by the National Science Foundation under the I/UCRC WindSTAR, NSF Award IIP 1362033.

Specific Armadillo Repeat Sequences Facilitate β-Catenin Nuclear Transport in Live Cells via Direct Binding to Nucleoporins Nup62, Nup153, and RanBP2/Nup358*

PubMed Central

Sharma, Manisha; Jamieson, Cara; Johnson, Michael; Molloy, Mark P.; Henderson, Beric R.

2012-01-01

β-Catenin transduces the Wnt signal from the membrane to nucleus, and certain gene mutations trigger its nuclear accumulation leading to cell transformation and cancer. β-Catenin shuttles between the nucleus and cytoplasm independent of classical Ran/transport receptor pathways, and this movement was previously hypothesized to involve the central Armadillo (Arm) domain. Fluorescence recovery after photobleaching (FRAP) assays were used to delineate functional transport regions of the Arm domain in living cells. The strongest nuclear import/export activity was mapped to Arm repeats R10–12 using both in vivo FRAP and in vitro export assays. By comparison, Arm repeats R3–8 of β-catenin were highly active for nuclear import but displayed a comparatively weak export activity. We show for the first time using purified components that specific Arm sequences of β-catenin interact directly in vitro with the FG repeats of the nuclear pore complex (NPC) components Nup62, Nup98, and Nup153, indicating an independent ability of β-catenin to traverse the NPC. Moreover, a proteomics screen identified RanBP2/Nup358 as a binding partner of Arm R10–12, and β-catenin was confirmed to interact with endogenous and ectopic forms of Nup358. We further demonstrate that knock-down of endogenous Nup358 and Nup62 impeded the rate of nuclear import/export of β-catenin to a greater extent than that of importin-β. The Arm R10–12 sequence facilitated transport even when β-catenin was bound to the Arm-binding partner LEF-1, and its activity was stimulated by phosphorylation at Tyr-654. These findings provide functional evidence that the Arm domain contributes to regulated β-catenin transport through direct interaction with the NPC. PMID:22110128

Association of polymorphisms in microRNA machinery genes (DROSHA, DICER1, RAN, and XPO5) with risk of idiopathic primary ovarian insufficiency in Korean women.

PubMed

Rah, HyungChul; Jeon, Young Joo; Lee, Bo Eun; Kim, Jung O; Shim, Sung Han; Lee, Woo Sik; Choi, Dong Hee; Kim, Ji Hyang; Kim, Nam Keun

2013-10-01

The aim of our study was to investigate whether polymorphisms in microRNA machinery genes are associated with the risk of primary ovarian insufficiency (POI). We genotyped 136 POI patients and 236 controls among Korean women for nine single nucleotide polymorphisms (SNPs; DROSHA rs6877842 and rs10719; DICER1 rs13078 and rs3742330; RAN rs14035; and XPO5 rs34324334, rs2257082, rs11544382, and rs11077) by polymerase chain reaction-restriction fragment length polymorphism analysis. Differences in genotype frequencies between patients and controls were compared, and odds ratios (ORs) and 95% CIs were determined as measures of the strength of the association between genotype and POI. Of the nine SNPs, XPO5 rs34324334 and rs11544382 were monomorphic and were not analyzed further. The XPO5 rs2257082 CT and CT + TT variant genotypes were more frequent in patients (OR, 2.097; 95% CI, 1.207-3.645) than in controls (OR, 2.030; 95% CI, 1.196-3.445). The combined frequencies of XPO5 rs2257082 CT + TT and rs11077 AC + CC genotypes were higher in patients than in controls (OR, 2.526; 95% CI, 1.088-5.865). An association of POI risk with other polymorphisms was not found. A haplotype-based analysis of seven polymorphisms of the microRNA machinery genes for gene-gene interactions suggests that ***ACTA, ***GCCA, ***G*C*, *T*ATTA, and ***ACT* haplotypes (asterisk indicates SNP locus not included; DROSHA rs6877842 and rs10719, DICER1 rs13078 and rs3742330, RAN rs14035, and XPO5 rs2257082 and rs11077 polymorphisms) are associated with higher POI prevalence, and that ***GCTA, ***ACCA, *C*ATTA, and *C*ATT* haplotypes are associated with lower POI prevalence. Our data demonstrate that the XPO5 rs2257082 T variant allele occurs more frequently in POI patients than in controls, suggesting that this allele may be associated with increased POI risk.

Oil Biodegradation and Bioremediation: A Tale of the Two Worst Spills in U.S. History

PubMed Central

2011-01-01

The devastating environmental impacts of the Exxon Valdez spill in 1989 and its media notoriety made it a frequent comparison to the BP Deepwater Horizon spill in the popular press in 2010, even though the nature of the two spills and the environments impacted were vastly different. Fortunately, unlike higher organisms that are adversely impacted by oil spills, microorganisms are able to consume petroleum hydrocarbons. These oil degrading indigenous microorganisms played a significant role in reducing the overall environmental impact of both the Exxon Valdez and BP Deepwater Horizon oil spills. PMID:21699212

Oil biodegradation and bioremediation: a tale of the two worst spills in U.S. history.

PubMed

Atlas, Ronald M; Hazen, Terry C

2011-08-15

The devastating environmental impacts of the Exxon Valdez spill in 1989 and its media notoriety made it a frequent comparison to the BP Deepwater Horizon spill in the popular press in 2010, even though the nature of the two spills and the environments impacted were vastly different. Fortunately, unlike higher organisms that are adversely impacted by oil spills, microorganisms are able to consume petroleum hydrocarbons. These oil degrading indigenous microorganisms played a significant role in reducing the overall environmental impact of both the Exxon Valdez and BP Deepwater Horizon oil spills.

Social conflict and the formation of emergent groups in a technological disaster: The Exxon Valdez oil spill and the response of residents in the area of Homer, Alaska

DOE Office of Scientific and Technical Information (OSTI.GOV)

Button, G.V.

1993-01-01

To date there has been a paucity of research on the formation of emergent groups in the wake of technological disasters. A majority of researchers have contended that whereas natural disasters engender social cohesion and stimulate the formation of emergent groups, technological disasters have the tendency to constrain such formation because of the social conflict which follows in the wake of a technological disaster. This thesis challenges that assumption and examines both the nature of the social conflict and the formation of emergent groups that occurred in the aftermath of this country's largest environmental disaster: the Exxon Valdez oil spill.more » An anthropological perspective is employed. The investigator examines the formation of such groups in the area of Homer, Alaska. The differential response to the disaster and the ensuing social conflict is examined by a combination of participant-observation methods, formal and informal, in-depth interviews, and archival records. This investigation reveals that although there was considerable social conflict, there was also sufficient social cohesion to promote the formation of emergent group responses to the oil spill and the cleanup that followed. Moreover, it finds that the resultant conflict and the formation of such groups was attributable in part to a widely reported sense of a loss of control' and considerable uncertainty about many of the facts' surrounding the spill. This included uncertainty about who was ultimately in control of the cleanup and which clean-up technologies and remediation efforts were most urgent and useful. This thesis concludes that, contrary to the expectations of most social scientists, emergent groups can form in the wake of a technological disaster. Moreover, given the sense of urgency and the common perception of disaster victims that authorities are both unable and unwilling to respond to disasters, the formation of such groups is inevitable.« less

33 CFR 83.30 - Anchored vessels and vessels aground (Rule 30).

Code of Federal Regulations, 2010 CFR

2010-07-01

... fore part, an all-round white light or one ball; and (2) At or near the stern and at a lower level than the light prescribed in subparagraph (1), an all-round white light. (b) Vessels of less than 50 meters... white light where it can best be seen instead of the lights prescribed in paragraph (a) of this Rule. (c...

33 CFR 83.30 - Anchored vessels and vessels aground (Rule 30).

Code of Federal Regulations, 2011 CFR

2011-07-01

... fore part, an all-round white light or one ball; and (2) At or near the stern and at a lower level than the light prescribed in subparagraph (1), an all-round white light. (b) Vessels of less than 50 meters... white light where it can best be seen instead of the lights prescribed in paragraph (a) of this Rule. (c...

33 CFR 83.30 - Anchored vessels and vessels aground (Rule 30).

Code of Federal Regulations, 2013 CFR

2013-07-01

... fore part, an all-round white light or one ball; and (2) At or near the stern and at a lower level than the light prescribed in subparagraph (1), an all-round white light. (b) Vessels of less than 50 meters... white light where it can best be seen instead of the lights prescribed in paragraph (a) of this Rule. (c...

33 CFR 83.30 - Anchored vessels and vessels aground (Rule 30).

Code of Federal Regulations, 2014 CFR

2014-07-01

... fore part, an all-round white light or one ball; and (2) At or near the stern and at a lower level than the light prescribed in subparagraph (1), an all-round white light. (b) Vessels of less than 50 meters... white light where it can best be seen instead of the lights prescribed in paragraph (a) of this Rule. (c...

33 CFR 83.30 - Anchored vessels and vessels aground (Rule 30).

Code of Federal Regulations, 2012 CFR

2012-07-01

... fore part, an all-round white light or one ball; and (2) At or near the stern and at a lower level than the light prescribed in subparagraph (1), an all-round white light. (b) Vessels of less than 50 meters... white light where it can best be seen instead of the lights prescribed in paragraph (a) of this Rule. (c...

Structure of the exportin Xpo4 in complex with RanGTP and the hypusine-containing translation factor eIF5A

PubMed Central

Aksu, Metin; Trakhanov, Sergei; Görlich, Dirk

2016-01-01

Xpo4 is a bidirectional nuclear transport receptor that mediates nuclear export of eIF5A and Smad3 as well as import of Sox2 and SRY. How Xpo4 recognizes such a variety of cargoes is as yet unknown. Here we present the crystal structure of the RanGTP·Xpo4·eIF5A export complex at 3.2 Å resolution. Xpo4 has a similar structure as CRM1, but the NES-binding site is occluded, and a new interaction site evolved that recognizes both globular domains of eIF5A. eIF5A contains hypusine, a unique amino acid with two positive charges, which is essential for cell viability and eIF5A function in translation. The hypusine docks into a deep, acidic pocket of Xpo4 and is thus a critical element of eIF5A's complex export signature. This further suggests that Xpo4 recognizes other cargoes differently, and illustrates how Xpo4 suppresses – in a chaperone-like manner – undesired interactions of eIF5A inside nuclei. PMID:27306458

Icebergs and oil tankers soon to mix

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hartline, B.K.; Rasmussen, A.; Bindschadler, R.

1980-07-18

Independent computer models by A. Rasmussen of the U.S. Geological Survey and R. Bindschadler (N.A.S.A.) indicate that the Columbia Glacier, which fronts a fjord adjoining the Valdez shipping channel, will undergo a rapid retreat in 1982-85, which will result in calving of icebergs at rates up to 8-11 cubic km/year. The snout of the glacier is now on a shoal at 75 meter depth and backing slowly into deeper water; the models, which are based on field studies of the Columbia Glacier since 1977 and of calving glaciers in general, show that the rate of calving is proportional to themore » depth of water at the snout. According to the U.S. Coast Guard, it may be necessary to prohibit tanker traffic into Valdez during periods of maxmium calving. Storage facilities at Valdez can hold eight days worth of oil flow through the trans-Alaska pipeline at the current rate of 1.6 million bbl/day, and the pipeline could be shut down for two days without causing problems on the North Slope.« less

The Impact of the 1989 Exxon Valdez Oil Spill on Phytoplankton as Evidenced Through the Sedimentary Dinoflagellate Cyst Records in Prince William Sound (Alaska, USA).

NASA Astrophysics Data System (ADS)

Genest, M.; Pospelova, V.; Williams, J. R.; Dellapenna, T.; Mertens, K.; Kuehl, S. A.

2016-12-01

Large volumes of crude oil are extracted from marine environments and transported via the sea, putting coastal communities at a greater risk of oils spills. It is therefore crucial for these communities to properly assess the risk. The first step is to understand the effects of such events on the environment, which is limited by the lack of research on the impact of oil spills on phytoplankton. This first-of-its-kind research aims to identify how one of the major groups of phytoplankton, dinoflagellates, have been affected by the 1989 Exxon Valdez oil spill in Prince William Sound (PWS), Alaska. To do this, sedimentary records of dinoflagellate cysts, produced during dinoflagellate reproduction and preserved in the sediment, were analyzed. Two sediment cores were collected from PWS in 2012. The sediments are mainly composed of silt with a small fraction of clay. Both well-dated with 210Pb and 137Cs, the cores have high sedimentation rates, allowing for an annual to biannual resolution. Core 10 has a sedimentation rate of 1.1 cm yr-1 and provides continuous record since 1957, while Core 12 has a sedimentation rate of 1.3 cm yr-1 and spans from 1934. The cores were subsampled every centimeter for a total of 110 samples. Samples were treated using a standard palynological processing technique to extract dinoflagellate cysts and 300 cysts were counted per sample. In both cores, cysts were abundant, diverse and well preserved with the average cyst assemblage being characterized by an equal number of cysts produced by autotrophic and heterotrophic dinoflagellates. Of the 40 dinoflagellate cyst taxa, the most abundant are: Operculodinium centrocarpum and Brigantedinium spp. Other common species are: Spiniferites ramosus, cysts of Pentapharsodinium dalei, Echinidinium delicatum, E. zonneveldiae, E. transparantum, Islandinium minutum, and a thin pale brown Brigantedinium type. Changes in the sedimentary sequence of dinoflagellate cysts were analyzed by determining cyst

A frequency domain linearized Navier-Stokes method including acoustic damping by eddy viscosity using RANS

NASA Astrophysics Data System (ADS)

Holmberg, Andreas; Kierkegaard, Axel; Weng, Chenyang

2015-06-01

In this paper, a method for including damping of acoustic energy in regions of strong turbulence is derived for a linearized Navier-Stokes method in the frequency domain. The proposed method is validated and analyzed in 2D only, although the formulation is fully presented in 3D. The result is applied in a study of the linear interaction between the acoustic and the hydrodynamic field in a 2D T-junction, subject to grazing flow at Mach 0.1. Part of the acoustic energy at the upstream edge of the junction is shed as harmonically oscillating disturbances, which are conveyed across the shear layer over the junction, where they interact with the acoustic field. As the acoustic waves travel in regions of strong shear, there is a need to include the interaction between the background turbulence and the acoustic field. For this purpose, the oscillation of the background turbulence Reynold's stress, due to the acoustic field, is modeled using an eddy Newtonian model assumption. The time averaged flow is first solved for using RANS along with a k-ε turbulence model. The spatially varying turbulent eddy viscosity is then added to the spatially invariant kinematic viscosity in the acoustic set of equations. The response of the 2D T-junction to an incident acoustic field is analyzed via a plane wave scattering matrix model, and the result is compared to experimental data for a T-junction of rectangular ducts. A strong improvement in the agreement between calculation and experimental data is found when the modification proposed in this paper is implemented. Discrepancies remaining are likely due to inaccuracies in the selected turbulence model, which is known to produce large errors e.g. for flows with significant rotation, which the grazing flow across the T-junction certainly is. A natural next step is therefore to test the proposed methodology together with more sophisticated turbulence models.

Exxon Valdez Spill Profile

EPA Pesticide Factsheets

In 1989, the oil tanker struck Bligh Reef and spilled over 11 million gallons of crude oil. The spill was the largest in U.S. history and tested the abilities of local, national, and industrial organizations to prepare for and respond to such a disaster.

56. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT GENERAL, DOUBLE EFFECT ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

56. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT GENERAL, DOUBLE EFFECT EVAPORATOR UNIT - Kennecott Copper Corporation, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

57. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT GENERAL, DOUBLE EFFECT ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

57. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT GENERAL, DOUBLE EFFECT EVAPORATOR UNIT - Kennecott Copper Corporation, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

Hydrocarbons in oil residues on beaches of islands of Prince William Sound, Alaska

USGS Publications Warehouse

Kvenvolden, K.A.; Hostettler, F.D.; Rapp, J.B.; Carlson, P.R.

1993-01-01

Aliphatic and aromatic hydrocarbons were measured on oil residues from beaches on six islands in Prince William Sound, Alaska. In addition to altered products from the Exxon Valdez oil spill of 1989, we also found, at two widely separated locations, residues that are similar to each other but chemically distinct from the spilled oil. Terpanes, steranes, monoaromatic steranes, and carbon isotopic compositions of total extracts were most useful in correlating the altered products of the spilled oil. These same parameters revealed that the two non-Valdez samples are likely residues of oil originally produced in California. The results indicate that oil residues currently on the beaches of this estuary have at least two quite different origins.

Multiple-correction hybrid k-exact schemes for high-order compressible RANS-LES simulations on fully unstructured grids

NASA Astrophysics Data System (ADS)

Pont, Grégoire; Brenner, Pierre; Cinnella, Paola; Maugars, Bruno; Robinet, Jean-Christophe

2017-12-01

A Godunov's type unstructured finite volume method suitable for highly compressible turbulent scale-resolving simulations around complex geometries is constructed by using a successive correction technique. First, a family of k-exact Godunov schemes is developed by recursively correcting the truncation error of the piecewise polynomial representation of the primitive variables. The keystone of the proposed approach is a quasi-Green gradient operator which ensures consistency on general meshes. In addition, a high-order single-point quadrature formula, based on high-order approximations of the successive derivatives of the solution, is developed for flux integration along cell faces. The proposed family of schemes is compact in the algorithmic sense, since it only involves communications between direct neighbors of the mesh cells. The numerical properties of the schemes up to fifth-order are investigated, with focus on their resolvability in terms of number of mesh points required to resolve a given wavelength accurately. Afterwards, in the aim of achieving the best possible trade-off between accuracy, computational cost and robustness in view of industrial flow computations, we focus more specifically on the third-order accurate scheme of the family, and modify locally its numerical flux in order to reduce the amount of numerical dissipation in vortex-dominated regions. This is achieved by switching from the upwind scheme, mostly applied in highly compressible regions, to a fourth-order centered one in vortex-dominated regions. An analytical switch function based on the local grid Reynolds number is adopted in order to warrant numerical stability of the recentering process. Numerical applications demonstrate the accuracy and robustness of the proposed methodology for compressible scale-resolving computations. In particular, supersonic RANS/LES computations of the flow over a cavity are presented to show the capability of the scheme to predict flows with shocks

54. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT FLOW DIAGRAM, REPRESENTING ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

54. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT FLOW DIAGRAM, REPRESENTING ONE COMPLETE CYCLE - Kennecott Copper Corporation, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

53. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT FLOW DIAGRAM, REPRESENTING ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

53. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT FLOW DIAGRAM, REPRESENTING ONE COMPLETE CYCLE - Kennecott Copper Corporation, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

55. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT FLOW DIAGRAM, REPRESENTING ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

55. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT FLOW DIAGRAM, REPRESENTING ONE COMPLETE CYCLE - Kennecott Copper Corporation, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

82. PHOTOCOPY OF DRAWING, SURFACE BUILDINGS, GENERAL, TRANSFORMER HOUSE, LOWER ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

82. PHOTOCOPY OF DRAWING, SURFACE BUILDINGS, GENERAL, TRANSFORMER HOUSE, LOWER CAMP, NORTH END - Kennecott Copper Corporation, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

81. PHOTOCOPY OF DRAWING, SURFACE BUILDINGS, GENERAL, TRANSFORMER HOUSE, LOWER ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

81. PHOTOCOPY OF DRAWING, SURFACE BUILDINGS, GENERAL, TRANSFORMER HOUSE, LOWER CAMP, NORTH END - Kennecott Copper Corporation, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

52. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT ROOF TRUSS DETAILS, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

52. PHOTOCOPY OF DRAWING AMMONIA LEACHING PLANT ROOF TRUSS DETAILS, SACKING SHED-FLOTATION UNIT - Kennecott Copper Corporation, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

51. PHOTOCOPY OF DRAWING, AMMONIA LEACHING PLANT ROOF TRUSS DETAILS, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

51. PHOTOCOPY OF DRAWING, AMMONIA LEACHING PLANT ROOF TRUSS DETAILS, SACKING SHED-FLOTATION UNIT - Kennecott Copper Corporation, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

Yrb4p, a yeast ran-GTP-binding protein involved in import of ribosomal protein L25 into the nucleus.

PubMed Central

Schlenstedt, G; Smirnova, E; Deane, R; Solsbacher, J; Kutay, U; Görlich, D; Ponstingl, H; Bischoff, F R

1997-01-01

Gsp1p, the essential yeast Ran homologue, is a key regulator of transport across the nuclear pore complex (NPC). We report the identification of Yrb4p, a novel Gsp1p binding protein. The 123 kDa protein was isolated from Saccharomyces cerevisiae cells and found to be related to importin-beta, the mediator of nuclear localization signal (NLS)-dependent import into the nucleus, and to Pse1p. Like importin-beta, Yrb4p and Pse1p specifically bind to Gsp1p-GTP, protecting it from GTP hydrolysis and nucleotide exchange. The GTPase block of Gsp1p complexed to Yrb4p or Pse1p is released by Yrb1p, which contains a Gsp1p binding domain distinct from that of Yrb4p. This might reflect an in vivo function for Yrb1p. Cells disrupted for YRB4 are defective in nuclear import of ribosomal protein L25, but show no defect in the import of proteins containing classical NLSs. Expression of a Yrb4p mutant deficient in Gsp1p-binding is dominant-lethal and blocks bidirectional traffic across the NPC in wild-type cells. L25 binds to Yrb4p and Pse1p and is released by Gsp1p-GTP. Consistent with its putative role as an import receptor for L25-like proteins, Yrb4p localizes to the cytoplasm, the nucleoplasm and the NPC. PMID:9321403

Refrigeration Plant, North Elevation, Second Floor Plan, East Elevation, Ground ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

Refrigeration Plant, North Elevation, Second Floor Plan, East Elevation, Ground Floor Plan, Section A-A - Kennecott Copper Corporation, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

SAR Observation and Modeling of Gap Winds in the Prince William Sound of Alaska.

PubMed

Liu, Haibo; Olsson, Peter Q; Volz, Karl

2008-08-22

Alaska's Prince William Sound (PWS) is a unique locale tending to have strong gap winds, especially in the winter season. To characterize and understand these strong surface winds, which have great impacts on the local marine and aviation activities, the surface wind retrieval from the Synthetic Aperture Radar data (SAR-wind) is combined with a numerical mesoscale model. Helped with the SAR-wind observations, the mesoscale model is used to study cases of strong winds and relatively weak winds to depict the nature of these winds, including the area of extent and possible causes of the wind regimes. The gap winds from the Wells Passage and the Valdez Arm are the most dominant gap winds in PWS. Though the Valdez Arm is north-south trending and Wells Passage is east-west oriented, gap winds often develop simultaneously in these two places when a low pressure system is present in the Northern Gulf of Alaska. These two gap winds often converge at the center of PWS and extend further out of the Sound through the Hinchinbrook Entrance. The pressure gradients imposed over these areas are the main driving forces for these gap winds. Additionally, the drainage from the upper stream glaciers and the blocking effect of the banks of the Valdez Arm probably play an important role in enhancing the gap wind.

Gravity survey and regional geology of the Prince William Sound epicentral region, Alaska: Chapter C in The Alaska earthquake, March 27, 1964: regional effects

USGS Publications Warehouse

Case, J.E.; Barnes, D.F.; Plafker, George; Robbins, S.L.

1966-01-01

Sedimentary and volcanic rocks of Mesozoic and early Tertiary age form a roughly arcuate pattern in and around Prince William Sound, the epicentral region of the Alaska earthquake of 1964. These rocks include the Valdez Group, a predominantly slate and graywacke sequence of Jurassic and Cretaceous age, and the Orca Group, a younger sequence of early Tertiary age. The Orca consists of a lower unit of dense-average 2.87 g per cm3 (grams per cubic centimeter) pillow basalt and greenstone intercalated with sedimentary rocks and an upper unit of lithologically variable sandstone interbedded with siltstone or argillite. Densities of the clastic rocks in both the Valdez and Orca Groups average about 2.69 g per cm3. Granitic rocks of relatively low density (2.62 g per cm3) cut the Valdez and Orca Groups at several localities. Both the Valdez and the Orca Groups were complexly folded and extensively faulted during at least three major episodes of deformation: an early period of Cretaceous or early Tertiary orogeny, a second orogeny that probably culminated in late Eocene or early Oligocene time and was accompanied or closely followed by emplacement of granitic batholiths, and a third episode of deformation that began in late Cenozoic time and continued intermittently to the present. About 500 gravity stations were established in the Prince William Sound region in conjunction with postearthquake geologic investigations. Simple Bouguer anomaly contours trend approximately parallel to the arcuate geologic structure around the sound. Bouguer anomalies decrease northward from +40 mgal (milligals) at the southwestern end of Montague Island to -70 mgal at College and Harriman Fiords. Most of this change may be interpreted as a regional gradient caused by thickening of the continental crust. Superimposed on the gradient is a prominent gravity high of as much as 65 mgal that extends from Elrington Island on the southwest, across Knight and Glacier Islands to the Ellamar Peninsula

Feasibility Study Utilizing Meteor Burst Communications for Vessel Monitoring

DOT National Transportation Integrated Search

1981-01-01

This document discusses the feasibility of using meteor burst communications for monitoring vessel position, in particular the Prince William Sound VMS near Valdez, Alaska. This document describes the equipment and operational performance of meteor b...

Estimating future flood frequency and magnitude in basins affected by glacier wastage.

DOT National Transportation Integrated Search

2015-03-01

We present field measurements of meteorology, hydrology and glaciers and long-term modeled projections of glacier mass balance and : stream flow informed by downscaled climate simulations. The study basins include Valdez Glacier Stream (342 km2 : ), ...

Ubiquitous tar balls with a California-source signature on the shorelines of Prince William Sound, Alaska

USGS Publications Warehouse

Kvenvolden, K.A.; Hostettler, F.D.; Carlson, P.R.; Rapp, J.B.; Threlkeld, C.N.; Warden, A.

1995-01-01

Although the shorelines of Prince William Sound still bear traces of the 1989 Exxon Valdez oil spill, most of the flattened tar balls that can be found today on these shorelines are not residues of Exxon Valdez oil. Instead, the carbon-isotopic and hydrocarbon-biomarker signatures of 61 tar ball samples, collected from shorelines throughout the northern and western parts of the sound, are all remarkably similar and have characteristics consistent with those of oil products that originated from the Monterey Formation source rocks of California. The carbon-isotopic compositions of the tar balls are all closely grouped (??13CPDB = -23.7 ?? 0.2???), within the range found in crude oils from those rocks, but are distinct from isotopic compositions of 28 samples of residues from the Exxon Valdez oil spill (??13CPDB = -29.4 ?? 0.1???). Likewise, values for selected biomarker ratios in the tar balls are all similar but distinct from values of residues from the 1989 oil spill. Carbon-isotopic and biomarker signatures generally relate the tar balls to oil products used in Alaska before ???1970 for construction and pavements. How these tar balls with such similar geochemical characteristics became so widely dispersed throughout the northern and western parts of the sound is not known with certainty, but the great 1964 Alaska earthquake was undoubtedly an important trigger, causing spills from ruptured storage facilities of California-sourced asphalt and fuel oil into Prince William Sound.

Proactive monitoring of a wind turbine array with lidar measurements, SCADA data and a data-driven RANS solver

NASA Astrophysics Data System (ADS)

Iungo, G.; Said, E. A.; Santhanagopalan, V.; Zhan, L.

2016-12-01

Power production of a wind farm and durability of wind turbines are strongly dependent on non-linear wake interactions occurring within a turbine array. Wake dynamics are highly affected by the specific site conditions, such as topography and local atmospheric conditions. Furthermore, contingencies through the life of a wind farm, such as turbine ageing and off-design operations, make prediction of wake interactions and power performance a great challenge in wind energy. In this work, operations of an onshore wind turbine array were monitored through lidar measurements, SCADA and met-tower data. The atmospheric wind field investing the wind farm was estimated by using synergistically the available data through five different methods, which are characterized by different confidence levels. By combining SCADA data and the lidar measurements, it was possible to estimate power losses connected with wake interactions. For this specific array, power losses were estimated to be 4% and 2% of the total power production for stable and convective atmospheric regimes, respectively. The entire dataset was then leveraged for the calibration of a data-driven RANS (DDRANS) solver for prediction of wind turbine wakes and power production. The DDRANS is based on a parabolic formulation of the Navier-Stokes equations with axisymmetry and boundary layer approximations, which allow achieving very low computational costs. Accuracy in prediction of wind turbine wakes and power production is achieved through an optimal tuning of the turbulence closure model. The latter is based on a mixing length model, which was developed based on previous wind turbine wake studies carried out through large eddy simulations and wind tunnel experiments. Several operative conditions of the wind farm under examination were reproduced through DDRANS for different stability regimes, wind directions and wind velocity. The results show that DDRANS is capable of achieving a good level of accuracy in prediction

Cost savings stemming from non-compliance with international environmental regulations in the maritime sector

DOT National Transportation Integrated Search

2003-01-01

According to one recent study, the illegal discharge of oil into the sea through routine operations is equal to over eight times the Exxon Valdez oil spill - every year. Oil pollution is not the only environmental impact stemming from maritime transp...

5 CFR Appendix D to Subpart B of... - Nonappropriated Fund Wage and Survey Areas

Code of Federal Regulations, 2010 CFR

2010-01-01

.... Survey area plus: Illinois: Cook Rock Island Vermilion Iowa: Johnson Michigan: Dickinson Marquette... Ketchikan Gateway Kodiak Island Sitka Southeast Fairbanks Valdez-Cordova Yukon-Koyukuk Arizona Maricopa... Pacific Islands Midway Island Johnston Island American Samoa Idaho Ada-Elmore Survey Area Idaho: Ada...

The African Heritage in Spanish Caribbean Literature.

ERIC Educational Resources Information Center

Smart, Ian I.

1981-01-01

Uses Fanon's concept of the Manichean colonial situation and his Dialectical Theory of Identification to explore images of African heritage in the works of two mulatto Cuban poets, Gabriel de la Concepcion Valdez (1809-1844) and Nicolas Guillen (born 1902). (GC)

Alternative interpretations of oil spill data

USGS Publications Warehouse

Piatt, John F.

1997-01-01

In his article "Oil, Seabirds, and Science" (BioScience 46: 587-597), John Wiens attempted to review Exxon Valdez oil spill (EVOS) damage assessment studies and the politics of EVOS science in one stroke. In my opinion, neither purpose was particularly well served.

5 CFR Appendix D to Subpart B of... - Nonappropriated Fund Wage and Survey Areas

Code of Federal Regulations, 2011 CFR

2011-01-01

... Illinois: Lake Area of Application. Survey area plus: Illinois: Cook Rock Island Vermilion Iowa: Johnson... North Star Juneau Kenai Peninsula Ketchikan Gateway Kodiak Island Sitka Southeast Fairbanks Valdez...: Hawaii (counties): Hawaii Kauai Maui Pacific Islands: Midway Islands Johnston Atoll American Samoa IDAHO...

5 CFR Appendix D to Subpart B of... - Nonappropriated Fund Wage and Survey Areas

Code of Federal Regulations, 2012 CFR

2012-01-01

... Illinois: Lake Area of Application. Survey area plus: Illinois: Cook Rock Island Vermilion Iowa: Johnson... North Star Juneau Kenai Peninsula Ketchikan Gateway Kodiak Island Sitka Southeast Fairbanks Valdez...: Hawaii (counties): Hawaii Kauai Maui Pacific Islands: Midway Islands Johnston Atoll American Samoa IDAHO...

5 CFR Appendix D to Subpart B of... - Nonappropriated Fund Wage and Survey Areas

Code of Federal Regulations, 2013 CFR

2013-01-01

... Illinois: Lake Area of Application. Survey area plus: Illinois: Cook Rock Island Vermilion Iowa: Johnson... North Star Juneau Kenai Peninsula Ketchikan Gateway Kodiak Island Sitka Southeast Fairbanks Valdez...: Hawaii (counties): Hawaii Kauai Maui Pacific Islands: Midway Islands Johnston Atoll American Samoa IDAHO...

75 FR 17316 - Prevailing Rate Systems; Nonappropriated Fund Wage and Survey Areas

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-06

...) Fairbanks North Star Juneau Kenai Peninsula Ketchikan Gateway Kodiak Island Sitka Southeast Fairbanks Valdez...: Hawaii (counties): Hawaii Kauai Maui Pacific Islands: Midway Islands Johnston Atoll American Samoa IDAHO... Lake Survey Area Illinois: Lake Area of Application. Survey area plus: Illinois: Cook Rock Island...

75 FR 49351 - Prevailing Rate Systems; Nonappropriated Fund Wage and Survey Areas

Federal Register 2010, 2011, 2012, 2013, 2014

2010-08-13

... area plus: Illinois: Cook Rock Island Vermilion Iowa: Johnson Michigan: Dickinson Marquette Wisconsin...) Fairbanks North Star Juneau Kenai Peninsula Ketchikan Gateway Kodiak Island Sitka Southeast Fairbanks Valdez... Islands: Midway Islands Johnston Atoll American Samoa IDAHO Ada[dash]Elmore Survey Area Idaho: Ada Elmore...

5 CFR Appendix D to Subpart B of... - Nonappropriated Fund Wage and Survey Areas

Code of Federal Regulations, 2014 CFR

2014-01-01

... area plus: Illinois: Cook Rock Island Vermilion Iowa: Johnson Michigan: Dickinson Marquette Wisconsin... North Star Juneau Kenai Peninsula Ketchikan Gateway Kodiak Island Sitka Southeast Fairbanks Valdez... Islands: Midway Islands Johnston Atoll American Samoa IDAHO Ada-Elmore Survey Area Idaho: Ada Elmore Area...

75 FR 6398 - Ocean Transportation Intermediary License Applicants

Federal Register 2010, 2011, 2012, 2013, 2014

2010-02-09

... Forwarder Transportation Intermediary Applicants Best Way Logistics Corp., 901 SW. 98th Terrace, Pembroke..., Officers, Alessandro E. Bernardini, Sales Manager, (Qualifying Individual), Glenda Valdez, President... Intermediary Applicants (Cont'd): Vortex Worldwide Logistics Corp., 10125 NW. 116th Way, 10, Miami, FL 33178...

Chicano.

ERIC Educational Resources Information Center

Johnson, Mark M.

2002-01-01

Presents information about the duo exhibit, "CHICANO," and provides background information about Chicano culture. Offers a discussion on artists in the exhibition, such as Carmen Lomas Garza, Leo Limon, Cesar Martinez, and Patssi Valdez. Includes reproductions of art works in the exhibit. (CMK)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harner, E.J.; Gilfillan, E.S.

Two large shoreline assessment studies conducted in 1990 in Prince William Sound, Alaska, after the Exxon Valdez oil spill used different design strategies to determine the impact of oiling on shoreline biota. One of the studies, the Coastal Habitat Injury Assessment (CHIA) conducted for the Exxon Valdez Oil Spill Council, used matched pairs of sites, normal population distributions for biota, and meta-analysis. The power of the CHIA study to detect oiling impacts depends on being able to identify and select appropriate pairs of sites for comparison. The CHIA study also increased the oiling signal by focusing on moderate to heavilymore » oiled sites. The Shoreline Ecology Program (SEP), conducted for Exxon, used a stratified-random-sampling study design, normal and non-normal population distributions and covariates. The SEP study was able to detect oiling impacts by using a sufficient number of sites and widely spaced transects.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Page, D.S.; Boehm, P.D.; Douglas, G.S.

Advanced hydrocarbon fingerprinting methods and improved analytical methods make possible the quantitative discrimination of the multiple sources of hydrocarbons in the benthic sediments of Prince William Sound (PWS) and the Gulf of Alaska. These methods measure an extensive range of polycyclic aromatic hydrocarbons (PAH) at detection levels that are as much as two orders of magnitude lower than those obtained by standard Environmental Protection Agency methods. Nineteen hundred thirty six subtidal sediment samples collected in the sound and the eastern Gulf of Alaska in 1989, 1990, and 1991 were analyzed. Fingerprint analyses of gas chromatography-mass spectrometry data reveal a naturalmore » background of petrogenic and biogenic PAH. Exxon Valdez crude, its weathering products, and diesel fuel refined from Alaska North Slope crude are readily distinguished from the natural seep petroleum background and from each other because of their distinctive PAH distributions. Mixing models were developed to calculate the PAH contributions from each source to each sediment sample. These calculations show that most of the seafloor in PWS contains no detectable hydrocarbons from the Exxon Valdez spill, although elevated concentrations of PAH from seep sources are widespread. In those areas where they were detected, spill hydrocarbons were generally a small increment to the natural petroleum hydrocarbon background. Low levels of Exxon Valdez crude residue were present in 1989 and again in 1990 in nearshore subtidal sediments off some shorelines that had been heavily oiled. By 1991 these crude residues were heavily degraded and even more sporadically distributed. 58 refs., 18 figs., 5 tabs.« less

RESIDUAL MUTAGENICITY OF THE ALASKAN OIL SPILL ORGANICS

EPA Science Inventory

RESIDUAL MUTAGENICITY OF THE ALASKAN OIL SPILL ORGANICS. L.D.

The Exxon Valdez, on March 24, 1989, spilled approximately eleven million gallons of Prudhoe Bay crude oil into the waters of Prince William Sound. Approximately 300 miles of
contaminated beach are potential...

77 FR 42722 - Copper Valley Electric Association; Notice of Updated Environmental Analysis Preparation Schedule

Federal Register 2010, 2011, 2012, 2013, 2014

2012-07-20

... DEPARTMENT OF ENERGY Federal Energy Regulatory Commission [Project No. 13124-002] Copper Valley...: Original License Application. b. Project No.: 13124-002. c. Applicant: Copper Valley Electric Association (Copper Valley). d. Name of Project: Allison Creek Project. e. Location: On the south side of Port Valdez...

Biodegradability Of Lingering EVOS Oil 19 Years After The Spill

EPA Science Inventory

In 2001 and 2003, NOAA scientists conducted geospatial surveys of lingering oil in Prince William Sound (PWS) and concluded areas were still contaminated with substantial subsurface oil from the 1989 Exxon Valdez oil spill (EVOS). In 2007, a mass weathering index (MWI) wa...

Effects of mora deletion, nonword repetition, rapid naming, and visual search performance on beginning reading in Japanese.

PubMed

Kobayashi, Maya Shiho; Haynes, Charles W; Macaruso, Paul; Hook, Pamela E; Kato, Junko

2005-06-01

This study examined the extent to which mora deletion (phonological analysis), nonword repetition (phonological memory), rapid automatized naming (RAN), and visual search abilities predict reading in Japanese kindergartners and first graders. Analogous abilities have been identified as important predictors of reading skills in alphabetic languages like English. In contrast to English, which is based on grapheme-phoneme relationships, the primary components of Japanese orthography are two syllabaries-hiragana and katakana (collectively termed "kana")-and a system of morphosyllabic symbols (kanji). Three RAN tasks (numbers, objects, syllabary symbols [hiragana]) were used with kindergartners, with an additional kanji RAN task included for first graders. Reading measures included accuracy and speed of passage reading for kindergartners and first graders, and reading comprehension for first graders. In kindergartners, hiragana RAN and number RAN were the only significant predictors of reading accuracy and speed. In first graders, kanji RAN and hiragana RAN predicted reading speed, whereas accuracy was predicted by mora deletion. Reading comprehension was predicted by kanji RAN, mora deletion, and nonword repetition. Although number RAN did not contribute unique variance to any reading measure, it correlated highly with kanji RAN. Implications of these findings for research and practice are discussed.

33 CFR 155.1125 - Additional response plan requirements.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Prince William Sound— (A) Valdez; (B) Tatitlek; (C) Cordova; (D) Whittier; (E) Chenega; and (F) Fish... include exercise procedures that must— (i) Provide two exercises of the oil spill removal organization... effectively; (ii) Provide for both announced and unannounced exercises; and (iii) Provide for exercises that...

50 CFR 100.23 - Rural determinations.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 50 Wildlife and Fisheries 6 2010-10-01 2010-10-01 false Rural determinations. 100.23 Section 100... area—including Kenai, Soldotna, Sterling, Nikiski, Salamatof, Kalifonsky, Kasilof, and Clam Gulch; (6... Pass; (9) Valdez; and (10) Wasilla/Palmer area—including Wasilla, Palmer, Sutton, Big Lake, Houston...

U.S. Coast Guard cutter personnel on Sweetbriar train their fire ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

U.S. Coast Guard cutter personnel on Sweetbriar train their fire hoses on a burning pleasure boat in an Alaskan harbor. A U.S. Coast Guard rigid-hull inflatable helps with the fire-fighting effort - U.S. Coast Guard Cutter SWEETBRIER, Cordova, Valdez-Cordova Census Area, AK

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stone, R.

Scientists from NOAA and Exxon dispute whether the Prince William Sound ecosystem is recovering from the Exxon Valdez spill. NOAA scientists claim that the Sound is still staggering from a major ecological blow and that crude oil weathering products are contaminating vast numbers of Alaskan wildlife. Exxon scientists claim that most of the biota of the Sound is returning to full strength and is largely free of oil from the spill. At the heart of the dispute is the technique of hydrocarbon fingerprinting to identify the source of crude. Exxon scientists claim that government scientists do not know how tomore » interpret the data, and that what they claim is contamination from Valdez crude actually comes from other sources, such as diesel soot from the smokestacks of ships used to collect fish for study. NOAA scientists claim that hydrocarbon fingerprinting is an inappropriate method for tracking oil-spill damage to biota, due to the varied ways in which living organisms metabolize petroleum.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bence, A.E.; Burns, W.A.

A procedure has been developed that discriminates Exxon Valdez crude from other sources of hydrocarbons found in Prince Williams Sound and the Gulf of Alaska. The procedure uses polycyclic aromatic hydrocarbon (PAH) distributions, measured by gas chromatography/mass spectrometry (GC/MS), to fingerprint sample extracts. The relative abundances of alkylated phenanthrenes, dibenzothiophenes, and chrysenes are used to differentiate Exxon Valdez crude and its weathering products from other hydrocarbons. Saturate fraction distributions are used to confirm the PAH identification whenever possible. The procedure has been applied to the more than 1,500 PAH analyses of tissues reported by the Oil Spill Health Task Force,more » formed after the spill to assess subsistence food safety, and nearly 4,700 PAH analyses of biological samples in PWSOIL, the government`s damage-assessment chemistry database. These two datasets constitute the largest collection of hydrocarbon analyses of biological samples form the spill-impact zone. 70 refs., 14 figs., 8 tabs.« less

Solid state characterization and crystal structure from X-ray powder diffraction of two polymorphic forms of ranitidine base.

PubMed

de Armas, Héctor Novoa; Peeters, Oswald M; Blaton, Norbert; Van Gyseghem, Elke; Martens, Johan; Van Haele, Gerrit; Van Den Mooter, Guy

2009-01-01

Ranitidine hydrochloride (RAN-HCl), a known anti-ulcer drug, is the product of reaction between HCl and ranitidine base (RAN-B). RAN-HCl has been extensively studied; however this is not the case of the RAN-B. The solid state characterization of RAN-B polymorphs has been carried out using different analytical techniques (microscopy, thermal analysis, Fourier transform infrared spectrometry in the attenuated total reflection mode, (13)C-CPMAS-NMR spectroscopy and X-ray powder diffraction). The crystal structures of RAN-B form I and form II have been determined using conventional X-ray powder diffraction in combination with simulated annealing and whole profile pattern matching, and refined using rigid-body Rietveld refinement. RAN-B form I is a monoclinic polymorph with cell parameters: a = 7.317(2), b = 9.021(2), c = 25.098(6) A, beta = 95.690(1) degrees and space group P2(1)/c. The form II is orthorhombic: a = 31.252(4), b = 13.052(2), c = 8.0892(11) A with space group Pbca. In RAN-B polymorphs, the nitro group is involved in a strong intramolecular hydrogen bond responsible for the existence of a Z configuration in the enamine portion of the molecules. A tail to tail packing motif can be denoted via intermolecular hydrogen bonds. The crystal structures of RAN-B forms are compared to those of RAN-HCl polymorphs. RAN-B polymorphs are monotropic polymorphic pairs. (c) 2008 Wiley-Liss, Inc. and the American Pharmacists Association

Examining the relationship between rapid automatized naming and arithmetic fluency in Chinese kindergarten children.

PubMed

Cui, Jiaxin; Georgiou, George K; Zhang, Yiyun; Li, Yixun; Shu, Hua; Zhou, Xinlin

2017-02-01

Rapid automatized naming (RAN) has been found to predict mathematics. However, the nature of their relationship remains unclear. Thus, the purpose of this study was twofold: (a) to examine how RAN (numeric and non-numeric) predicts a subdomain of mathematics (arithmetic fluency) and (b) to examine what processing skills may account for the RAN-arithmetic fluency relationship. A total of 160 third-year kindergarten Chinese children (83 boys and 77 girls, mean age=5.11years) were assessed on RAN (colors, objects, digits, and dice), nonverbal IQ, visual-verbal paired associate learning, phonological awareness, short-term memory, speed of processing, approximate number system acuity, and arithmetic fluency (addition and subtraction). The results indicated first that RAN was a significant correlate of arithmetic fluency and the correlations did not vary as a function of type of RAN or arithmetic fluency tasks. In addition, RAN continued to predict addition and subtraction fluency even after controlling for all other processing skills. Taken together, these findings challenge the existing theoretical accounts of the RAN-arithmetic fluency relationship and suggest that, similar to reading fluency, multiple processes underlie the RAN-arithmetic fluency relationship. Copyright © 2016 Elsevier Inc. All rights reserved.

75 FR 42728 - Copper Valley Electric Association, Inc.; Notice of Preliminary Permit Application Accepted for...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-07-22

... Federal Power Act, proposing to study the feasibility of the Silver Lake Hydroelectric Project, located on Silver Lake and Duck River, in the Valdez-Cordova Census Area, Alaska. The sole purpose of a preliminary...-high roller-compacted concrete dam constructed at the outfall of Silver Lake to Duck River; (2) Silver...

33 CFR 154.1125 - Additional response plan requirements.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Sound: (A) Valdez; (B) Tatitlek; (C) Cordova; (D) Whittier; (E) Chenega; and (F) Fish hatcheries located...) Address the responsibilities required in § 154.1035(b)(3)(iii). (2) Exercises. Identification of exercise procedures that must— (i) Provide for two exercises of the oil spill removal organization each year that test...

76 FR 28766 - Flint Hills Resources Alaska, LLC; Notice of Petition for Declaratory Order

Federal Register 2010, 2011, 2012, 2013, 2014

2011-05-18

... governing transportation of crude oil on the Trans Alaskan Pipeline System (TAPS) is unjust, unreasonable... returns to TAPS after the oil has been shipped 300 miles from Prudhoe Bay to Flint Hills' North Pole... returned to TAPS for resumption of its transportation to Valdez, Alaska. Any person desiring to intervene...

Alaska Department of Natural Resources

Science.gov Websites

Commission on Federal Areas in Alaska Exxon Valdez Oil Spill Trustee Council Natural Resources Conservation Hazards Safety Commission Geologic Mapping Advisory Board Minerals Commission Royalty Oil and Gas Geological and Geophysical Surveys Mining, Land and Water Division of Oil and Gas Parks and Outdoor

Effects of the Oil Spill on Alaskan Education.

ERIC Educational Resources Information Center

Oldaker, Lawrence Lee

Oil-industry-produced revenues, help finance Alaskan state and local governmental services including education. Capital losses incurred by the Exxon Corporation and by commerical fisheries as a consequence of the Exxon Valdez oil spill caused an economic recession, the result being diminished financing for a number of governmental programs and…

Ranolazine triggers pharmacological preconditioning and postconditioning in anesthetized rabbits through activation of RISK pathway.

PubMed

Efentakis, Panagiotis; Andreadou, Ioanna; Bibli, Sophia-Iris; Vasileiou, Styliani; Dagres, Nikolaos; Zoga, Anastasia; Lougiakis, Nikolaos; Kremastinos, Dimitrios Th; Iliodromitis, Efstathios K

2016-10-15

We tested the hypothesis that ranolazine (Ran) is cardioprotective in a model of ischemia /reperfusion and we elucidated the intracellular mechanism. Anesthetized rabbits were subjected to is chemia and reperfusion and were divided into 5 groups: 1) Control, 2) Preconditioning (PreC), 3) Postconditioning (PostC), 4) RanA and 5) RanB, respectively treated with intravenous ranolazine, either 10min before or during index ischemia. Ranolazine was initially given over 60s and then from the beginning and throughout the whole reperfusion period. The infarcted to the risk ratio was calculated (%I/R). In a second series consisting of respective to the first series groups, the animals were subjected to the same interventions up to the 10th min of reperfusion where tissue samples were taken for immunoblotting of Akt, eNOS, ERK½ and GSK3β (RISK pathway). In a third series, RanA+Wort, RanB+Wort and Wort groups were treated with ranolazine as RanA and RanB groups but with the addition of the PI3 inhibitor Wortmaninn (Wort) and %I/R calculated. Ranolazine reduced the % I/R in RanA and RanB compared to the Control (23.1±1.7%, 17.6±2.0% vs 47.6±1.0%, P<0.05). %I/R reduction achieved in the RanA and RanB groups was comparable to that observed in PreC and PostC (16.3±2.1%, 26.2±2.1%, respectively P<0.05 vs Control). Phosphorylation of Akt, ERK½, eNOS and GSK3β were higher in PreC, PostC and in both ranolazine treated groups. Wortmannin abrogated ranolazine's %I/R reduction (RanA+Wort 31.4±1.7%, RanB+Wort 32.4±2.4%). Ranolazine reduces %I/R and triggers cardioprotection with a similar to conditioning mechanism which upregulates the RISK pathway. Copyright © 2016 Elsevier B.V. All rights reserved.

What Discrete and Serial Rapid Automatized Naming Can Reveal about Reading

ERIC Educational Resources Information Center

de Jong, Peter F.

2011-01-01

Serial rapid automized naming (RAN) has been often found to correlate more strongly with reading than discrete RAN. This study aimed to demonstrate that the strength of the RAN-reading fluency relationship is dependent on the format of both RAN and the reading task if the reading task consists of sight words. Seventy-one first-grade, 74…

76 FR 47573 - TransCanada Alaska Company, LLC; Notice of Intent To Prepare an Environmental Impact Statement...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-05

... is a new natural gas pipeline system that would transport natural gas produced on the Alaska North... provisions of section 7(c) of the Natural Gas Act (NGA) and the Alaska Natural Gas Pipeline Act of 2004... pipeline to Valdez, Alaska for delivery into a liquefied natural gas (LNG) plant for liquefaction and...

33 CFR 3.85-15 - Sector Anchorage: Western Alaska Marine Inspection Zone and Captain of the Port Zones; Marine...

Code of Federal Regulations, 2014 CFR

2014-07-01

... Marine Inspection Zone and Captain of the Port Zones; Marine Safety Unit Valdez: Prince William Sound Marine Inspection and Captain of the Port Zones. 3.85-15 Section 3.85-15 Navigation and Navigable Waters... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventeenth Coast Guard District § 3.85-15 Sector Anchorage...

33 CFR 3.85-15 - Sector Anchorage: Western Alaska Marine Inspection Zone and Captain of the Port Zones; Marine...

Code of Federal Regulations, 2011 CFR

2011-07-01

... Marine Inspection Zone and Captain of the Port Zones; Marine Safety Unit Valdez: Prince William Sound Marine Inspection and Captain of the Port Zones. 3.85-15 Section 3.85-15 Navigation and Navigable Waters... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventeenth Coast Guard District § 3.85-15 Sector Anchorage...

33 CFR 3.85-15 - Sector Anchorage: Western Alaska Marine Inspection Zone and Captain of the Port Zones; Marine...

Code of Federal Regulations, 2012 CFR

2012-07-01

... Marine Inspection Zone and Captain of the Port Zones; Marine Safety Unit Valdez: Prince William Sound Marine Inspection and Captain of the Port Zones. 3.85-15 Section 3.85-15 Navigation and Navigable Waters... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventeenth Coast Guard District § 3.85-15 Sector Anchorage...

33 CFR 3.85-15 - Sector Anchorage: Western Alaska Marine Inspection Zone and Captain of the Port Zones; Marine...

Code of Federal Regulations, 2013 CFR

2013-07-01

... Marine Inspection Zone and Captain of the Port Zones; Marine Safety Unit Valdez: Prince William Sound Marine Inspection and Captain of the Port Zones. 3.85-15 Section 3.85-15 Navigation and Navigable Waters... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventeenth Coast Guard District § 3.85-15 Sector Anchorage...

33 CFR 3.85-15 - Sector Anchorage: Western Alaska Marine Inspection Zone and Captain of the Port Zones; Marine...

Code of Federal Regulations, 2010 CFR

2010-07-01

... Marine Inspection Zone and Captain of the Port Zones; Marine Safety Unit Valdez: Prince William Sound Marine Inspection and Captain of the Port Zones. 3.85-15 Section 3.85-15 Navigation and Navigable Waters... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventeenth Coast Guard District § 3.85-15 Sector Anchorage...

Commentary on "A Quality of Giftedness"

ERIC Educational Resources Information Center

Shaughnessy, Michael F.; Valdez, Gilbert

2012-01-01

In this commentary on "A Quality of Giftedness," ("Gifted and Talented International," v27 n2 p13-71 2012), by Dr. Joan Freeman, Michael F. Shaughnessy and Gilbert Valdez recognize that those working with gifted populations have all encountered an intangible, ephemeral aspect that is often quite difficult to describe, harder…

Publications - RDF 2015-8 | Alaska Division of Geological & Geophysical

Science.gov Websites

from the Tonsina area, Valdez Quadrangle, Alaska: Alaska Division of Geological & Geophysical Surveys Skip to content State of Alaska myAlaska My Government Resident Business in Alaska Visiting Alaska State Employees DGGS State of Alaska search Alaska Division of Geological & Geophysical

Publications - GMC 401 | Alaska Division of Geological & Geophysical

Science.gov Websites

DGGS GMC 401 Publication Details Title: Core photographs, lithologic logs, drilling data, and borehole , 2012, Core photographs, lithologic logs, drilling data, and borehole inventory for the Caribou Dome publication sales page for information on ordering data on DVD. Keywords Core Drilling; Core Logs; Valdez

Children's Moral and Ecological Reasoning about the Prince William Sound Oil Spill.

ERIC Educational Resources Information Center

Kahn, Peter H., Jr.

1997-01-01

Examined the moral and ecological reasoning of second, fifth, and eighth graders regarding the Exxon Valdez oil spill. Found that children understood negative effects of the spill, cared that harm occurred to shoreline and marine life, and thought it violated a moral obligation. Fifth and eighth graders used a greater proportion of anthropocentric…

Does the Relation between Rapid Automatized Naming and Reading Depend on Age or on Reading Level? A Behavioral and ERP Study

PubMed Central

Cohen, Marjolaine; Mahé, G.; Laganaro, Marina; Zesiger, Pascal

2018-01-01

Reading predictors evolve through age: phonological awareness is the best predictor of reading abilities at the beginning of reading acquisition while Rapid Automatized Naming (RAN) becomes the best reading predictor in more experienced readers (around 9–10 years old). Those developmental changes in the relationship between RAN and reading have so far been explained in term of participants' age. However, it should be noted that in the previous experiments age always co-vary with participants reading level. It is thus not clear whether RAN-reading relationship is developmental in nature or related to the reading system itself. This study investigates whether the behavioral changes in the relationship between RAN and reading and their electrophysiological correlates are related to the chronological age or to the reading level of the participants. Thirty two French-speaking children aged 7–10 years took part to the experiment: they were divided into groups contrasted on age but with similar reading levels and the other way round. Participants performed two reading tasks and four RAN tasks. EEG/ERP was recorded during discrete letter and picture RAN. Behavioral results revealed that alphanumeric RAN is more sensitive to age variations than reading level differences. The inverse profile was revealed for picture RAN, which discriminate poor and good readers among typically developed children within the same age-group. ERPs of both letter and picture RAN differed across age groups whereas only for the picture RAN ERPs differed across reading levels. Taken together, these results suggest that picture RAN is a particularly good indicator of reading level variance independently of age. PMID:29520226

Is rapid automatized naming related to reading and mathematics for the same reason(s)? A follow-up study from kindergarten to Grade 1.

PubMed

Georgiou, George K; Tziraki, Niki; Manolitsis, George; Fella, Argyro

2013-07-01

We examined (a) what rapid automatized naming (RAN) components (articulation time and/or pause time) predict reading and mathematics ability and (b) what processing skills involved in RAN (speed of processing, response inhibition, working memory, and/or phonological awareness) may explain its relationship with reading and mathematics. A sample of 72 children were followed from the beginning of kindergarten until the end of Grade 1 and were assessed on measures of RAN, general cognitive ability, speed of processing, attention, working memory, phonological awareness, reading, and mathematics. The results indicated that pause time was the critical component in both the RAN-reading and RAN-mathematics relationships and that it shared most of its predictive variance in reading and mathematics with speed of processing and working memory. Our findings further suggested that, unlike the relationship between RAN and reading fluency in Grade 1, there is nothing in the RAN task that is uniquely related to math. Copyright © 2013 Elsevier Inc. All rights reserved.

The Epistemic Value of Cautionary Tales

ERIC Educational Resources Information Center

Shields, William M.

2006-01-01

A cautionary tale has become something of a cottage industry in the past decade. To be sure, there has been plenty of material for these publications: Bhopal, Chernobyl, "Exxon Valdez," Three Mile Island, and "Challenger" have entered the lexicon as virtual synonyms for "disaster." Cautionary tale scenarios involve a different kind of causality.…

Social and environmental sustainability in large-scale coastal zones: Taking an issue-based approach to the implementation of the Prince William Sound sustainable human use framework

Treesearch

Dale J. Blahna; Aaron Poe; Courtney Brown; Clare M. Ryan; H. Randy Gimblett

2017-01-01

Following the grounding of the Exxon Valdez in 1989, a sustainable human use framework (human use framework) for Prince William Sound (PWS), AK was developed by the Chugach National Forest after concerns emerged about the social and environmental impacts of expanding human use due to cleanup activities and increased recreation visitation. A practical, issue-based...

Critical Thinking: The Role of Management Education. Developing Managers To Think Critically.

ERIC Educational Resources Information Center

Pierce, Gloria

Emphasizing critical thinking as the source of renewal and survival of organizations, this document begins by analyzing the Exxon Valdez oil spill and the destruction of the space shuttle Challenger as examples of inadequate critical thinking. The role of management education in promoting critical thinking is explored as well as the need for a…

Phonological Awareness and Rapid Automatized Naming Are Independent Phonological Competencies With Specific Impacts on Word Reading and Spelling: An Intervention Study.

PubMed

Vander Stappen, Caroline; Reybroeck, Marie Van

2018-01-01

Phonological awareness (PA) and rapid automatized naming (RAN) have been shown to be powerful predictors of reading achievement across many languages. However, literature remains unclear: (a) whether RAN is independent of PA, (b) about the specific influences of PA and RAN on reading and spelling, and (c) about the efficacy of a RAN intervention. This study aims to address these issues by means of an intervention design. Precisely, the objectives are (a) to determine whether training one competence involves or not an effect on the other, (b) to examine whether each intervention based on oral abilities (PA vs. RAN) could improve word reading and word spelling performances, and (c) to assess the efficacy of a RAN-objects' intervention. Thirty-six French-speaking second graders, from two Belgian elementary schools, were divided into two groups, and received either a PA- or a RAN-objects' intervention. Twenty-five-minute lessons took place at school twice a week over a period of 2 months. Both groups were compared on multiple experimental measures (PA, RAN, word reading, and word spelling), before and immediately after the intervention, and 6 months later. Results showed specific efficacy of the two interventions, with participants trained in one ability outperforming those from the other group on this specific ability at post-test. Moreover, the PA intervention revealed transfer effects on the sub-lexical processes of spelling, while the RAN intervention enhanced word reading speed. Finally, the results demonstrated the efficacy of a RAN-objects' intervention for the first time. These findings provide a new piece of evidence showing the independence of PA and RAN, each process influencing the acquisition of literacy skills in a different way. The efficacy and the specific transfer effects of both interventions open up new perspectives for prevention and targeted remediation of reading disabilities.

Phonological Awareness and Rapid Automatized Naming Are Independent Phonological Competencies With Specific Impacts on Word Reading and Spelling: An Intervention Study

PubMed Central

Vander Stappen, Caroline; Reybroeck, Marie Van

2018-01-01

Phonological awareness (PA) and rapid automatized naming (RAN) have been shown to be powerful predictors of reading achievement across many languages. However, literature remains unclear: (a) whether RAN is independent of PA, (b) about the specific influences of PA and RAN on reading and spelling, and (c) about the efficacy of a RAN intervention. This study aims to address these issues by means of an intervention design. Precisely, the objectives are (a) to determine whether training one competence involves or not an effect on the other, (b) to examine whether each intervention based on oral abilities (PA vs. RAN) could improve word reading and word spelling performances, and (c) to assess the efficacy of a RAN-objects’ intervention. Thirty-six French-speaking second graders, from two Belgian elementary schools, were divided into two groups, and received either a PA- or a RAN-objects’ intervention. Twenty-five-minute lessons took place at school twice a week over a period of 2 months. Both groups were compared on multiple experimental measures (PA, RAN, word reading, and word spelling), before and immediately after the intervention, and 6 months later. Results showed specific efficacy of the two interventions, with participants trained in one ability outperforming those from the other group on this specific ability at post-test. Moreover, the PA intervention revealed transfer effects on the sub-lexical processes of spelling, while the RAN intervention enhanced word reading speed. Finally, the results demonstrated the efficacy of a RAN-objects’ intervention for the first time. These findings provide a new piece of evidence showing the independence of PA and RAN, each process influencing the acquisition of literacy skills in a different way. The efficacy and the specific transfer effects of both interventions open up new perspectives for prevention and targeted remediation of reading disabilities. PMID:29593618

Large-Eddy / Reynolds-Averaged Navier-Stokes Simulations of a Dual-Mode Scramjet Combustor

NASA Technical Reports Server (NTRS)

Fulton, Jesse A.; Edwards, Jack R.; Hassan, Hassan A.; Rockwell, Robert; Goyne, Christopher; McDaniel, James; Smith, Chad; Cutler, Andrew; Johansen, Craig; Danehy, Paul M.;

Catalysis of GTP Hydrolysis by Small GTPases at Atomic Detail by Integration of X-ray Crystallography, Experimental, and Theoretical IR Spectroscopy*

PubMed Central

Rudack, Till; Jenrich, Sarah; Brucker, Sven; Vetter, Ingrid R.; Gerwert, Klaus; Kötting, Carsten

2015-01-01

Small GTPases regulate key processes in cells. Malfunction of their GTPase reaction by mutations is involved in severe diseases. Here, we compare the GTPase reaction of the slower hydrolyzing GTPase Ran with Ras. By combination of time-resolved FTIR difference spectroscopy and QM/MM simulations we elucidate that the Mg2+ coordination by the phosphate groups, which varies largely among the x-ray structures, is the same for Ran and Ras. A new x-ray structure of a Ran·RanBD1 complex with improved resolution confirmed this finding and revealed a general problem with the refinement of Mg2+ in GTPases. The Mg2+ coordination is not responsible for the much slower GTPase reaction of Ran. Instead, the location of the Tyr-39 side chain of Ran between the γ-phosphate and Gln-69 prevents the optimal positioning of the attacking water molecule by the Gln-69 relative to the γ-phosphate. This is confirmed in the RanY39A·RanBD1 crystal structure. The QM/MM simulations provide IR spectra of the catalytic center, which agree very nicely with the experimental ones. The combination of both methods can correlate spectra with structure at atomic detail. For example the FTIR difference spectra of RasA18T and RanT25A mutants show that spectral differences are mainly due to the hydrogen bond of Thr-25 to the α-phosphate in Ran. By integration of x-ray structure analysis, experimental, and theoretical IR spectroscopy the catalytic center of the x-ray structural models are further refined to sub-Å resolution, allowing an improved understanding of catalysis. PMID:26272610

Evaluation of machine learning algorithms for prediction of regions of high Reynolds averaged Navier Stokes uncertainty

DOE PAGES

Ling, Julia; Templeton, Jeremy Alan

2015-08-04

Reynolds Averaged Navier Stokes (RANS) models are widely used in industry to predict fluid flows, despite their acknowledged deficiencies. Not only do RANS models often produce inaccurate flow predictions, but there are very limited diagnostics available to assess RANS accuracy for a given flow configuration. If experimental or higher fidelity simulation results are not available for RANS validation, there is no reliable method to evaluate RANS accuracy. This paper explores the potential of utilizing machine learning algorithms to identify regions of high RANS uncertainty. Three different machine learning algorithms were evaluated: support vector machines, Adaboost decision trees, and random forests.more » The algorithms were trained on a database of canonical flow configurations for which validated direct numerical simulation or large eddy simulation results were available, and were used to classify RANS results on a point-by-point basis as having either high or low uncertainty, based on the breakdown of specific RANS modeling assumptions. Classifiers were developed for three different basic RANS eddy viscosity model assumptions: the isotropy of the eddy viscosity, the linearity of the Boussinesq hypothesis, and the non-negativity of the eddy viscosity. It is shown that these classifiers are able to generalize to flows substantially different from those on which they were trained. As a result, feature selection techniques, model evaluation, and extrapolation detection are discussed in the context of turbulence modeling applications.« less

The influence of inattention and rapid automatized naming on reading performance.

PubMed

Pham, Andy V; Fine, Jodene Goldenring; Semrud-Clikeman, Margaret

2011-04-01

The current study examined the relation between attention, rapid automatized naming (RAN), and reading fluency among typically developing children. A total of 104 third- and fourth-grade children (8-11 years of age) completed RAN measures consisting of four stimuli (letter, digit, color, and object) and an oral reading fluency measure from the Gray Oral Reading Test-Fourth Edition. Correlational and hierarchical regression analyses revealed that all four RAN stimuli, particularly letter RAN, were significant predictors of reading fluency. Additionally, parent and teacher ratings of inattention from the Swanson, Nolan and Pelham-Version Four rating scale predicted RAN after controlling for gender, working memory, and estimated IQ. Further analyses indicated that RAN performance mediated the relation between inattention and reading fluency. Results support the need to consider attentional variables when assessing reading performance, even among typically developing children.

Catalysis of GTP hydrolysis by small GTPases at atomic detail by integration of X-ray crystallography, experimental, and theoretical IR spectroscopy.

PubMed

Rudack, Till; Jenrich, Sarah; Brucker, Sven; Vetter, Ingrid R; Gerwert, Klaus; Kötting, Carsten

2015-10-02

Small GTPases regulate key processes in cells. Malfunction of their GTPase reaction by mutations is involved in severe diseases. Here, we compare the GTPase reaction of the slower hydrolyzing GTPase Ran with Ras. By combination of time-resolved FTIR difference spectroscopy and QM/MM simulations we elucidate that the Mg(2+) coordination by the phosphate groups, which varies largely among the x-ray structures, is the same for Ran and Ras. A new x-ray structure of a Ran·RanBD1 complex with improved resolution confirmed this finding and revealed a general problem with the refinement of Mg(2+) in GTPases. The Mg(2+) coordination is not responsible for the much slower GTPase reaction of Ran. Instead, the location of the Tyr-39 side chain of Ran between the γ-phosphate and Gln-69 prevents the optimal positioning of the attacking water molecule by the Gln-69 relative to the γ-phosphate. This is confirmed in the RanY39A·RanBD1 crystal structure. The QM/MM simulations provide IR spectra of the catalytic center, which agree very nicely with the experimental ones. The combination of both methods can correlate spectra with structure at atomic detail. For example the FTIR difference spectra of RasA18T and RanT25A mutants show that spectral differences are mainly due to the hydrogen bond of Thr-25 to the α-phosphate in Ran. By integration of x-ray structure analysis, experimental, and theoretical IR spectroscopy the catalytic center of the x-ray structural models are further refined to sub-Å resolution, allowing an improved understanding of catalysis. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

The contribution of discrete-trial naming and visual recognition to rapid automatized naming deficits of dyslexic children with and without a history of language delay

PubMed Central

Gasperini, Filippo; Brizzolara, Daniela; Cristofani, Paola; Casalini, Claudia; Chilosi, Anna Maria

2014-01-01

Children with Developmental Dyslexia (DD) are impaired in Rapid Automatized Naming (RAN) tasks, where subjects are asked to name arrays of high frequency items as quickly as possible. However the reasons why RAN speed discriminates DD from typical readers are not yet fully understood. Our study was aimed to identify some of the cognitive mechanisms underlying RAN-reading relationship by comparing one group of 32 children with DD with an age-matched control group of typical readers on a naming and a visual recognition task both using a discrete-trial methodology, in addition to a serial RAN task, all using the same stimuli (digits and colors). Results showed a significant slowness of DD children in both serial and discrete-trial naming (DN) tasks regardless of type of stimulus, but no difference between the two groups on the discrete-trial recognition task. Significant differences between DD and control participants in the RAN task disappeared when performance in the DN task was partialled out by covariance analysis for colors, but not for digits. The same pattern held in a subgroup of DD subjects with a history of early language delay (LD). By contrast, in a subsample of DD children without LD the RAN deficit was specific for digits and disappeared after slowness in DN was partialled out. Slowness in DN was more evident for LD than for noLD DD children. Overall, our results confirm previous evidence indicating a name-retrieval deficit as a cognitive impairment underlying RAN slowness in DD children. This deficit seems to be more marked in DD children with previous LD. Moreover, additional cognitive deficits specifically associated with serial RAN tasks have to be taken into account when explaining deficient RAN speed of these latter children. We suggest that partially different cognitive dysfunctions underpin superficially similar RAN impairments in different subgroups of DD subjects. PMID:25237301

RAN and Double-Deficit Theory

ERIC Educational Resources Information Center

Cronin, Virginia S.

2013-01-01

Lervag and Hulme’s neuro-developmental theory and Wolf and Bowers’s double-deficit hypothesis were examined in this longitudinal study. A total of 130 children were tested in preschool and followed through fifth grade, when 84 remained in the study. During preschool and kindergarten the participants were given tests of end-sound discrimination…

Why Does Rapid Naming Predict Chinese Word Reading?

ERIC Educational Resources Information Center

Shum, Kathy Kar-man; Au, Terry Kit-fong

2017-01-01

Rapid automatized naming (RAN) robustly predicts early reading abilities across languages, but its underlying mechanism remains unclear. This study found that RAN associated significantly with processing speed but not with phonological awareness or orthographic knowledge in 89 Hong Kong Chinese second-graders. RAN overlaps more with processing…

7 CFR 272.7 - Procedures for program administration in Alaska.

Code of Federal Regulations, 2012 CFR

2012-01-01

... Borough with the exception of Kodiak; in all places in the Kenai Peninsula Borough that are west of Cook... for Cold Bay and Adak. (3) Urban Alaska TFP refers to a TFP that is the higher of the TFP that was in...: Cold Bay and Adak in the Aleutian Islands; Kodiak in Kodiak Island Borough; Valdez and Dayville in the...

7 CFR 272.7 - Procedures for program administration in Alaska.

Code of Federal Regulations, 2013 CFR

2013-01-01

... Borough with the exception of Kodiak; in all places in the Kenai Peninsula Borough that are west of Cook... for Cold Bay and Adak. (3) Urban Alaska TFP refers to a TFP that is the higher of the TFP that was in...: Cold Bay and Adak in the Aleutian Islands; Kodiak in Kodiak Island Borough; Valdez and Dayville in the...

7 CFR 272.7 - Procedures for program administration in Alaska.

Code of Federal Regulations, 2014 CFR

2014-01-01

... Borough with the exception of Kodiak; in all places in the Kenai Peninsula Borough that are west of Cook... for Cold Bay and Adak. (3) Urban Alaska TFP refers to a TFP that is the higher of the TFP that was in...: Cold Bay and Adak in the Aleutian Islands; Kodiak in Kodiak Island Borough; Valdez and Dayville in the...

Beneficial and Deleterious Bacterial - Host Interactions in Chronic Wound Pathophysiology

DTIC Science & Technology

2015-04-02

Lactobacillus plantarum supernatants disrupted biofilms made by a laboratory strain of P. aeruginosa by 43% and a P. aeruginosa clini- cal strain...that used L. plantarum topically,73–75 Lactobacillus septicemia is possi- ble in severely immunocompromised individuals, and seems to be strain...Bosch A, Yantorno OM, Valdez JC. Antipathogenic properties of Lactobacillus plantarum on Pseudomonas aeruginosa: the potential use of its

DOE Office of Scientific and Technical Information (OSTI.GOV)

Warheit, K.I.; Harrison, C.S.; Divoky, G.J.

The Pacific Seabird Group implemented a workshop designed to provide recommendations on restoration options for seabirds injured by EVOS (Exxon Valdez Oil Spill). The workshop produced criteria to be used to determine if the population effects resulting from a spill are a concern, and to establish a priority list for restoration activities. Specific operational goals for restoration activities were recorded.

Subliminal food images compromise superior working memory performance in women with restricting anorexia nervosa.

PubMed

Brooks, Samantha J; O'Daly, Owen G; Uher, Rudolf; Schiöth, Helgi B; Treasure, Janet; Campbell, Iain C

2012-06-01

Prefrontal cortex (PFC) is dysregulated in women with restricting anorexia nervosa (RAN). It is not known whether appetitive non-conscious stimuli bias cognitive responses in those with RAN. Thirteen women with RAN and 20 healthy controls (HC) completed a dorsolateral PFC (DLPFC) working memory task and an anterior cingulate cortex (ACC) conflict task, while masked subliminal food, aversive and neutral images were presented. During the DLPFC task, accuracy was higher in the RAN compared to the HC group, but superior performance was compromised when subliminal food stimuli were presented: errors positively correlated with self-reported trait anxiety in the RAN group. These effects were not observed in the ACC task. Appetitive activation is intact and anxiogenic in women with RAN, and non-consciously interacts with working memory processes associated with the DLPFC. This interaction mechanism may underlie cognitive inhibition of appetitive processes that are anxiety inducing, in people with AN. Copyright © 2012 Elsevier Inc. All rights reserved.

Cognitive Predictors of Rapid Picture Naming

ERIC Educational Resources Information Center

Decker, Scott L.; Roberts, Alycia M.; Englund, Julia A.

2013-01-01

Deficits in rapid automatized naming (RAN) have been found to be a sensitive cognitive marker for children with dyslexia. However, there is a lack of consensus regarding the construct validity and theoretical neuro-cognitive processes involved in RAN. Additionally, most studies investigating RAN include a narrow range of cognitive measures. The…

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

This Environmental Impact Statement (EIS) examines a proposal for improvements at the existing University of Alaska, Fairbanks, Institute of Marine Science (IMS), Seward Marine Center. The Exxon Valdez Oil Spill (EVOS) Trustee Council is proposing to improve the existing research infrastructure to enhance the EVOS Trustee Council`s capabilities to study and rehabilitate marine mammals, marine birds, and the ecosystem injured by the Exxon Valdez oil spill. The analysis in this document focuses on the effects associated with construction and operation of the proposed project and its proposed alternatives. The EIS gives a detailed description of all major elements of themore » proposed project and its alternatives; identifies resources of major concern that were raised during the scoping process; describes the environmental background conditions of those resources; defines and analyzes the potential effects of the proposed project and its alternatives on these conditions; and identifies mitigating measures that are part of the project design as well as those proposed to minimize or reduce the adverse effects. Included in the EIS are written and oral comments received during the public comment period.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

Four years after its occurrence rocked the petroleum industry and revitalized the US environmental movement, the Exxon Valdez tanker oil spill off Alaska continues to stir controversy. Conflicting reports abound over whether there is long term damage to the Prince William Sound ecosystem resulting from the March 24, 1989, spill. Government scientists at recent conferences disclosed studies they contend show long term, significant damage to the sound. Exxon this month launched a counteroffensive, disclosing results of studies it funded that it claims show no credible scientific evidence of long term damage. At the same time, the company blasted as flawedmore » the government's data on assessing environmental damage to the sound and charged that test samples from the sound were mishandled. Meantime, Prince William Sound still shows lingering effects from the Exxon Valdez oil spill. But recovery has been so rapid that there is more controversy over how to use $900 million in natural resource recovery funds that Exxon paid than over how badly species are suffering. The paper describes Exxon's studies; faulty data; lingering damage; and an update on tanker safety.« less

Modeling the relationship between rapid automatized naming and literacy skills across languages varying in orthographic consistency.

PubMed

Georgiou, George K; Aro, Mikko; Liao, Chen-Huei; Parrila, Rauno

2016-03-01

The purpose of this study was twofold: (a) to contrast the prominent theoretical explanations of the rapid automatized naming (RAN)-reading relationship across languages varying in orthographic consistency (Chinese, English, and Finnish) and (b) to examine whether the same accounts can explain the RAN-spelling relationship. In total, 304 Grade 4 children (102 Chinese-speaking Taiwanese children, 117 English-speaking Canadian children, and 85 Finnish-speaking children) were assessed on measures of RAN, speed of processing, phonological processing, orthographic processing, reading fluency, and spelling. The results of path analysis indicated that RAN had a strong direct effect on reading fluency that was of the same size across languages and that only in English was a small proportion of its predictive variance mediated by orthographic processing. In contrast, RAN did not exert a significant direct effect on spelling, and a substantial proportion of its predictive variance was mediated by phonological processing (in Chinese and Finnish) and orthographic processing (in English). Given that RAN predicted reading fluency equally well across languages and that phonological/orthographic processing had very little to do with this relationship, we argue that the reason why RAN is related to reading fluency should be sought in domain-general factors such as serial processing and articulation. Copyright © 2015 Elsevier Inc. All rights reserved.

Rapid Naming Speed and Chinese Character Recognition

ERIC Educational Resources Information Center

Liao, Chen-Huei; Georgiou, George K.; Parrila, Rauno

2008-01-01

We examined the relationship between rapid naming speed (RAN) and Chinese character recognition accuracy and fluency. Sixty-three grade 2 and 54 grade 4 Taiwanese children were administered four RAN tasks (colors, digits, Zhu-Yin-Fu-Hao, characters), and two character recognition tasks. RAN tasks accounted for more reading variance in grade 4 than…

Growth in Rapid Automatized Naming from Grades K to 8 in Children with Math or Reading Disabilities

ERIC Educational Resources Information Center

Mazzocco, Michèle M. M.; Grimm, Kevin J.

2013-01-01

Rapid automatized naming (RAN) is widely used to identify reading disabilities (RD) and has recently been considered a potential predictor of risk for mathematics learning disabilities (MLD). Here we longitudinally examine RAN performance from Grades K to 8, to view how growth on RAN response time differs for children with RD versus MLD. Across…

Standard CMMI Appraisal Method for Process Improvement (SCAMPI) A, Version 1.3: Method Definition Document

DTIC Science & Technology

2011-03-01

performance of Federal Government Contract Number FA8721-05- C -0003 with Carnegie Mellon University for the operation of the Software Engineering... C Roles and Responsibilities 195 Appendix D Reporting Requirements and Options 201 Appendix E Managed Discovery 203 Appendix F Scoping and...Upgrade Team (SUT) • Mary Busby , Lockheed Martin • Palma Buttles-Valdez, Software Engineering Institute • Paul Byrnes, Integrated System Diagnostics

Standard CMMI (Registered Trademark) Appraisal Method for Process Improvement (SCAMPI (Service Mark)) A, Version 1.3: Method Definition Document

DTIC Science & Technology

2011-03-01

performance of Federal Government Contract Number FA8721-05- C -0003 with Carnegie Mellon University for the operation of the Software Engineering... C Roles and Responsibilities 195 Appendix D Reporting Requirements and Options 201 Appendix E Managed Discovery 203 Appendix F Scoping and...Upgrade Team (SUT) • Mary Busby , Lockheed Martin • Palma Buttles-Valdez, Software Engineering Institute • Paul Byrnes, Integrated System Diagnostics

Numerical approach to optimal portfolio in a power utility regime-switching model

NASA Astrophysics Data System (ADS)

Gyulov, Tihomir B.; Koleva, Miglena N.; Vulkov, Lubin G.

2017-12-01

We consider a system of weakly coupled degenerate semi-linear parabolic equations of optimal portfolio in a regime-switching with power utility function, derived by A.R. Valdez and T. Vargiolu [14]. First, we discuss some basic properties of the solution of this system. Then, we develop and analyze implicit-explicit, flux limited finite difference schemes for the differential problem. Numerical experiments are discussed.

Why Is Rapid Automatized Naming Related to Reading?

ERIC Educational Resources Information Center

Georgiou, George K.; Parrila, Rauno; Cui, Ying; Papadopoulos, Timothy C.

2013-01-01

The objective of this study was to examine why rapid automatized naming (RAN) is related to reading by manipulating processes involved at the input, processing, and output stages of its production. In total, 65 children in Grade 2 and 65 in Grade 6 were assessed on serial and discrete RAN (Digits and Objects), Cancellation, RAN Yes/No, and oral…

Cognitive and Environmental Correlates of Rapid Automatized Naming in Chinese Kindergarten Children

ERIC Educational Resources Information Center

Liu, Cuina; Georgiou, George K.

2017-01-01

Although rapid automatized naming (RAN) is one of the best predictors of reading across languages, its nature remains elusive. In the present study, we aim to elucidate the nature of RAN by examining the cognitive and environmental correlates of RAN. One hundred forty-one second-year kindergarten Chinese children (71 girls, 70 boys; mean age =…

Investigation of heat transfer and flow using ribs within gas turbine blade cooling passage: Experimental and hybrid LES/RANS modeling

NASA Astrophysics Data System (ADS)

Kumar, Sourabh

temperature prediction which can be applied routinely in the design stage of turbine cooled vanes and blades. This study presents an attempt to collect information about Nusselt number inside the ribbed duct and a series of measurement is performed in steady state eliminating the error sources inherently connected with transient method. A Large Eddy Simulation (LES) is carried out on the best V and Broken V rib arrangements to analyze the flow pattern inside the channel. A novel method is devised to analyze the results obtained from CFD simulation. Hybrid LES/Reynolds Averaged Navier Strokes (RANS) modeling is used to modify Reynolds stresses using Algebraic Stress Model (ASM).

The Immune Adaptor SLP-76 Binds to SUMO-RANGAP1 at Nuclear Pore Complex Filaments to Regulate Nuclear Import of Transcription Factors in T Cells

PubMed Central

Liu, Hebin; Schneider, Helga; Recino, Asha; Richardson, Christine; Goldberg, Martin W.; Rudd, Christopher E.

2015-01-01

Summary While immune cell adaptors regulate proximal T cell signaling, direct regulation of the nuclear pore complex (NPC) has not been reported. NPC has cytoplasmic filaments composed of RanGAP1 and RanBP2 with the potential to interact with cytoplasmic mediators. Here, we show that the immune cell adaptor SLP-76 binds directly to SUMO-RanGAP1 of cytoplasmic fibrils of the NPC, and that this interaction is needed for optimal NFATc1 and NF-κB p65 nuclear entry in T cells. Transmission electron microscopy showed anti-SLP-76 cytoplasmic labeling of the majority of NPCs in anti-CD3 activated T cells. Further, SUMO-RanGAP1 bound to the N-terminal lysine 56 of SLP-76 where the interaction was needed for optimal RanGAP1-NPC localization and GAP exchange activity. While the SLP-76-RanGAP1 (K56E) mutant had no effect on proximal signaling, it impaired NF-ATc1 and p65/RelA nuclear entry and in vivo responses to OVA peptide. Overall, we have identified SLP-76 as a direct regulator of nuclear pore function in T cells. PMID:26321253

Unpacking Direct and Indirect Relationships of Short-Term Memory to Word Reading: Evidence From Korean-Speaking Children.

PubMed

Kim, Young-Suk Grace; Cho, Jeung-Ryeul; Park, Soon-Gil

2017-08-01

We examined the relations of short-term memory (STM), metalinguistic awareness (phonological, morphological, and orthographic awareness), and rapid automatized naming (RAN) to word reading in Korean, a language with a relatively transparent orthography. STM, metalinguistic awareness, and RAN have been shown to be important to word reading, but the nature of the relations of STM, metalinguistic awareness, and RAN to word reading has rarely been investigated. Two alternative models were fitted. In the indirect relation model, STM was hypothesized to be indirectly related to word reading via metalinguistic awareness and RAN. In the direct and indirect relations model, STM was hypothesized to be directly and indirectly related to word reading. Results from 207 beginning readers in South Korea showed that STM was directly related to word reading as well as indirectly via metalinguistic awareness and RAN. Although the direct effect of STM was relatively small (.16), the total effect incorporating the indirect effect was substantial (.42). These results suggest that STM is an important, foundational cognitive capacity that underpins metalinguistic awareness and RAN as well as word reading, and further indicate the importance of considering both direct and indirect effects of language and cognitive skills on word reading.

Humidity-dependent compression-induced glass transition of the air-water interfacial Langmuir films of poly(D,L-lactic acid-ran-glycolic acid) (PLGA).

PubMed

Kim, Hyun Chang; Lee, Hoyoung; Jung, Hyunjung; Choi, Yun Hwa; Meron, Mati; Lin, Binhua; Bang, Joona; Won, You-Yeon

2015-07-28

Constant rate compression isotherms of the air-water interfacial Langmuir films of poly(D,L-lactic acid-ran-glycolic acid) (PLGA) show a distinct feature of an exponential increase in surface pressure in the high surface polymer concentration regime. We have previously demonstrated that this abrupt increase in surface pressure is linked to the glass transition of the polymer film, but the detailed mechanism of this process is not fully understood. In order to obtain a molecular-level understanding of this behavior, we performed extensive characterizations of the surface mechanical, structural and rheological properties of Langmuir PLGA films at the air-water interface, using combined experimental techniques including the Langmuir film balance, X-ray reflectivity and double-wall-ring interfacial rheometry methods. We observed that the mechanical and structural responses of the Langmuir PLGA films are significantly dependent on the rate of film compression; the glass transition was induced in the PLGA film only at fast compression rates. Surprisingly, we found that this deformation rate dependence is also dependent on the humidity of the environment. With water acting as a plasticizer for the PLGA material, the diffusion of water molecules through the PLGA film seems to be the key factor in the determination of the glass transformation properties and thus the mechanical response of the PLGA film against lateral compression. Based on our combined results, we hypothesize the following mechanism for the compression-induced glass transformation of the Langmuir PLGA film; (1) initially, a humidified/non-glassy PLGA film is formed in the full surface-coverage region (where the surface pressure shows a plateau) during compression; (2) further compression leads to the collapse of the PLGA chains and the formation of new surfaces on the air side of the film, and this newly formed top layer of the PLGA film is transiently glassy in character because the water evaporation rate

Response variability in rapid automatized naming predicts reading comprehension

PubMed Central

Li, James J.; Cutting, Laurie E.; Ryan, Matthew; Zilioli, Monica; Denckla, Martha B.; Mahone, E. Mark

2009-01-01

A total of 37 children ages 8 to 14 years, screened for word-reading difficulties (23 with attention-deficit/hyperactivity disorder, ADHD; 14 controls) completed oral reading and rapid automatized naming (RAN) tests. RAN trials were segmented into pause and articulation time and intraindividual variability. There were no group differences on reading or RAN variables. Color- and letter-naming pause times and number-naming articulation time were significant predictors of reading fluency. In contrast, number and letter pause variability were predictors of comprehension. Results support analysis of subcomponents of RAN and add to literature emphasizing intraindividual variability as a marker for response preparation, which has relevance to reading comprehension. PMID:19221923

The Black Hull Fleet: Multi-Function Assets for Multi-Mission Duty

DTIC Science & Technology

2011-01-01

also conduct annual training and mock ex- ercises using pre-staged vessel of opportunity skimming system gear, and all crews receive hazardous waste...Valdez oil spill in 1989, the Oil Pollution Act of 1990 mandated that they be outfittedwith an onboard spilled oil recovery system (SORS) comprised of... outriggers , booms, hydraulic skim- ming equipment, and product storage vessels. The“Black Hull” Fleet Multi-function assets for multi-mission duty. by

Assessing Patient Experiences with Healthcare in Multi-Cultural Settings

DTIC Science & Technology

2001-01-01

article from a Los Angeles Spanish language newspaper entitled "Resultado mixto en reduccion de clases" ( La Opinion, June 24, 1999: Al) and a...Giachello, Aday, & Chiu, 1981; Ginzberg, 1991; Schur, White, & Berk, 1995; Schur & Albers 1996; Valdez, Giachello, Rodriguez-Trias, Gomez, & de la Rocha...explicaciones de los procedimientos medicos y los resultados de los andlisis); and (5) reassurance and support from your doctor and support staff ( la

Effects of Automation on Aircrew Workload and Situation Awareness in Tactical Airlift Missions

DTIC Science & Technology

2015-12-24

autopilot (Hall, 1996; FAA). The inability of the crew to manually override the autopilot and mode confusion was causal to the Exxon Valdez oil spill...malfunctioned. In the case of a loss in propeller hydraulic fluid (“Prop Low Oil ” light), a warning light illuminates on the engine instrument stack...2013). Analysis of workload of tank crew under the conditions of informatization . Beijing: China North Vehicle Research Institute. Martin, G

Effects of the earthquake of March 27, 1964, on various communities: Chapter G in The Alaska earthquake, March 27, 1964: effects on communities

USGS Publications Warehouse

Plafker, George; Kachadoorian, Reuben; Eckel, Edwin B.; Mayo, Lawrence R.

1969-01-01

The 1964 earthquake caused wide-spread damage to inhabited places throughout more than 60,000 square miles of south-central Alaska. This report describes damage to all communities in the area except Anchorage, Whittier, Homer, Valdez, Seward, the communities of the Kodiak group of islands, and communities in the Copper River Basin; these were discussed in previous chapters of the Geological Survey's series of reports on the earthquake. At the communities discussed herein, damage resulted primarily from sea waves of diverse origins, displacements of the land relative to sea level, and seismic shaking. Waves took all of the 31 lives lost at those communities; physical damage was primarily from the waves and vertical displacements of the land relative to sea level. Destructive waves of local origin struck during or immediately after the earthquake throughout much of Prince William Sound, the southern Kenai Peninsula, and the shores of Kenai Lake. In Prince William Sound, waves demolished all but one home at the native village of Chenega, destroyed homesites at Point Nowell and Anderson Bay, and caused varying amounts of damage to waterfront facilities at Sawmill Bay, Latouche, Port Oceanic, Port Nellie Juan, Perry Island, and western Port Valdez. The local waves, which ran up as high as 70 feet above tide level at Chenega and more than 170 feet in several uninhabited parts of the Sound, took nearly all of the lives lost by drowning at these communities. Destructive local waves that devastated shores of Anderson Bay and adjacent parts of western Port Valdez probably were generated primarily by massive submarine slides of glacial and fluvioglacial deposits ; the origin of the waves that caused damage at most of the other communities and at extensive uninhabited segments of shoreline is not known. At these places the most probable generative mechanisms are: unidentified submarine slides of unconsolidated deposits, and (or) the horizontal tectonic displacements, of 20 to

Strontium ranelate reduces the progression of experimental dog osteoarthritis by inhibiting the expression of key proteases in cartilage and of IL-1β in the synovium.

PubMed

Pelletier, Jean-Pierre; Kapoor, Mohit; Fahmi, Hassan; Lajeunesse, Daniel; Blesius, Alexia; Maillet, Juliette; Martel-Pelletier, Johanne

2013-02-01

To explore the disease-modifying effect, under therapeutic conditions, of strontium ranelate (SrRan) on the progression of joint structural changes and on the major pathophysiological pathways in an experimental osteoarthritis dog model. Dogs underwent sectioning of the anterior cruciate ligament, and 4 weeks after surgery received oral treatment of SrRan 25, 50 or 75 mg/kg per day, or placebo for 12 weeks. Methods included macroscopy, picrosirius red staining, histology, subchondral bone histomorphometry, quantitative PCR, and ELISA for CTX-II level in serum. Strontium plasma and synovial fluid levels were also measured. At steady state, strontium blood exposures were within the clinical therapeutic range of osteoarthritis patients and correlated with strontium concentrations in synovial fluid. SrRan treatment significantly reduced the osteoarthritis cartilage lesions at all doses tested (p≤0.05). Significantly better preservation of the collagen network was also found in SrRan-treated dogs at 50 and 75 mg/kg per day (p=0.03). The osteoarthritis subchondral bone thickening observed in osteoarthritis-placebo dogs was significantly reduced by SrRan at 50 mg/kg per day (p=0.02). The increased gene expression levels of MMP-1, MMP-13 and cathepsin K in osteoarthritis cartilage were all significantly reduced by SrRan at 75 mg/kg per day (p≤0.03) as were, in osteoarthritis synovium, IL-1β at 50 and 75 mg/kg per day (p=0.05) and MMP-3 at all doses tested (p≤0.02). The serum level of CTX-II was reduced (p≤0.04) by SrRan at 16 weeks in dogs treated with 50 and 75 mg/kg per day. This study is the first to demonstrate in vivo in an animal model that SrRan reduced the progression of osteoarthritis structural changes. The inhibition of several key proteases as well as IL-1β may have contributed to the beneficial effect of SrRan.

Voices from the bush: remote area nurses prioritise hazards that contribute to violence in their workplace.

PubMed

McCullough, K M; Williams, A M; Lenthall, S

2012-01-01

Remote Area Nurses (RANs) in Australia frequently encounter hazards that contribute to violence in the work place. Resources to deal with this problem are limited. Adopting a risk management approach and using the Delphi method, a panel of expert RANs (n=10) from geographically diverse communities across Australia, identified and prioritised hazards that increase the risk of violence to nurses. This descriptive study found that RANs encounter a wide variety of hazards from a variety of sources. Environmental hazards are complicated by living in remote areas and practicing in different locations. Relationships between the nurse and the community can be complex and lack of experience and organisational support may contribute to an increased risk of violence. Hazards prioritised as 'major' or 'extreme' risks included: clinic maintenance and security features, attending to patients at staff residences, RAN inexperience and lack of knowledge about the community, as well as intoxicated clients with mental health issues. A work culture that accepts verbal abuse as 'part of the job' was identified as a significant organisational risk to RANs. A lack of action from management when hazards are identified by clinic staff and insufficient recognition of the risk of violence by employers were also significant hazards. Further consideration of the hazards described in this study following the risk management process, may provide opportunities to reduce the risk of violence towards RANs. Proposed control measures should be developed in consultation with RANs and the remote communities they work in.

What stresses remote area nurses? Current knowledge and future action.

PubMed

Lenthall, Sue; Wakerman, John; Opie, Tess; Dollard, Maureen; Dunn, Sandra; Knight, Sabina; Macleod, Martha; Watson, Colin

2009-08-01

Review and synthesise the literature identifying the stresses experienced by remote area nurses (RANs). Identify interventions implemented to address identified stresses. Explore the use of the job demands-resources (JD-R) model. A comprehensive literature review was conducted using the meta-databases Ovid and Informit. Remote Australian primary health care centres. The reported demands experienced by RANs can be grouped into four themes: (i) the remote context; (ii) workload and extended scope of practice; (iii) poor management; and (iv) violence in the workplace and community. In this high-demand, low-resource context, the JD-R model of occupational stress is particularly pertinent to examining occupational stress among RANs. The demands on RANs, such as the isolated geographical context, are immutable. However, there are key areas where resources can be enhanced to better meet the high level of need. These are: (i) adequate and appropriate education, training and orientation; (ii) appropriate funding of remote health services; and (iii) improved management practices and systems. There is a lack of empirical evidence relating to stresses experienced by RANs. The literature identifies some of the stresses experienced by RANs as unique to the remote context, while some are related to high demands coupled with a deficit of appropriate resources. Use of models, such as the JD-R model of occupational stress, might assist in identifying key areas where resources can be enhanced to better meet the high level of need and reduce RANs' levels of stress.

Plasma klotho levels decrease in both anorexia nervosa and obesity.

PubMed

Amitani, Marie; Asakawa, Akihiro; Amitani, Haruka; Kaimoto, Kaori; Sameshima, Nanami; Koyama, Ken Ichiro; Haruta, Izumi; Tsai, Minglun; Nakahara, Toshihiro; Ushikai, Miharu; Cheng, Kai-Chun; Hamada, Satoshi; Inui, Akio

2013-09-01

The aim of this study was to examine the associations of klotho with body mass index (BMI) in patients with restricting-type anorexia nervosa (r-AN) and obesity. We examined plasma klotho as well as adiponectin and its isoform levels in comparison in 11 obese patients, 12 r-AN patients, and 11 control participants. Plasma klotho levels were markedly lower in the obesity and r-AN groups than in the control group. Moreover, plasma klotho levels increased significantly after the recovery of BMI in r-AN patients. Total and high-molecular-weight adiponectin levels were significantly decreased only in obesity. There was no relationship between klotho and total adiponectin levels or klotho and respective adiponectin isoform levels in the entire study population. These results suggest that klotho may reflect normal nutritional state, and that the decrease of klotho in r-AN and obesity may underlie the deteriorating processes of these disorders. Copyright © 2013 Elsevier Inc. All rights reserved.

Retrospective cost adaptive Reynolds-averaged Navier-Stokes k-ω model for data-driven unsteady turbulent simulations

NASA Astrophysics Data System (ADS)

Li, Zhiyong; Hoagg, Jesse B.; Martin, Alexandre; Bailey, Sean C. C.

2018-03-01

This paper presents a data-driven computational model for simulating unsteady turbulent flows, where sparse measurement data is available. The model uses the retrospective cost adaptation (RCA) algorithm to automatically adjust the closure coefficients of the Reynolds-averaged Navier-Stokes (RANS) k- ω turbulence equations to improve agreement between the simulated flow and the measurements. The RCA-RANS k- ω model is verified for steady flow using a pipe-flow test case and for unsteady flow using a surface-mounted-cube test case. Measurements used for adaptation of the verification cases are obtained from baseline simulations with known closure coefficients. These verification test cases demonstrate that the RCA-RANS k- ω model can successfully adapt the closure coefficients to improve agreement between the simulated flow field and a set of sparse flow-field measurements. Furthermore, the RCA-RANS k- ω model improves agreement between the simulated flow and the baseline flow at locations at which measurements do not exist. The RCA-RANS k- ω model is also validated with experimental data from 2 test cases: steady pipe flow, and unsteady flow past a square cylinder. In both test cases, the adaptation improves agreement with experimental data in comparison to the results from a non-adaptive RANS k- ω model that uses the standard values of the k- ω closure coefficients. For the steady pipe flow, adaptation is driven by mean stream-wise velocity measurements at 24 locations along the pipe radius. The RCA-RANS k- ω model reduces the average velocity error at these locations by over 35%. For the unsteady flow over a square cylinder, adaptation is driven by time-varying surface pressure measurements at 2 locations on the square cylinder. The RCA-RANS k- ω model reduces the average surface-pressure error at these locations by 88.8%.

Gene transcription patterns in response to low level petroleum contaminants in Mytilus trossulus from field sites and harbors in southcentral Alaska

NASA Astrophysics Data System (ADS)

Bowen, Lizabeth; Miles, A. Keith; Ballachey, Brenda; Waters, Shannon; Bodkin, James; Lindeberg, Mandy; Esler, Daniel

2018-01-01

The 1989 Exxon Valdez oil spill damaged a wide range of natural resources, including intertidal communities, and post-spill studies demonstrated acute and chronic exposure and injury to an array of species. Standard toxicological methods to evaluate petroleum contaminants have assessed tissue burdens, with fewer assays providing indicators of health or physiology, particularly when contaminant levels are low and chronic. Marine mussels are a ubiquitous and crucial component of the nearshore environment, and new genomic technologies exist to quantify molecular responses of individual mussels to stimuli, including exposure to polycyclic aromatic hydrocarbons (PAHs). We used gene-based assays of exposure and physiological function to assess chronic oil contamination using the Pacific blue mussel, Mytilus trossulus. We developed a diagnostic gene transcription panel to investigate exposure to PAHs and other contaminants and its effects on mussel physiology and health. During 2012-2015, we analyzed mussels from five field sites in western Prince William Sound, Alaska, with varying oil histories from the 1989 Exxon Valdez oil spill, and from three boat harbors in the area. Gene transcription patterns of mussels from harbors were consistent with elevated exposure to PAHs or other contaminants, whereas transcription patterns of mussels sampled from shorelines in areas affected by the oil spill indicated no PAH exposure.

Gene transcription patterns in response to low level petroleum contaminants in Mytilus trossulus from field sites and harbors in southcentral Alaska

USGS Publications Warehouse

Bowen, Lizabeth; Miles, A. Keith; Ballachey, Brenda E.; Waters, Shannon C.; Bodkin, James L.; Lindeberg, Mandy; Esler, Daniel N.

2017-01-01

The 1989 Exxon Valdez oil spill damaged a wide range of natural resources, including intertidal communities, and post-spill studies demonstrated acute and chronic exposure and injury to an array of species. Standard toxicological methods to evaluate petroleum contaminants have assessed tissue burdens, with fewer assays providing indicators of health or physiology, particularly when contaminant levels are low and chronic. Marine mussels are a ubiquitous and crucial component of the nearshore environment, and new genomic technologies exist to quantify molecular responses of individual mussels to stimuli, including exposure to polycyclic aromatic hydrocarbons (PAHs). We used gene-based assays of exposure and physiological function to assess chronic oil contamination using the Pacific blue mussel, Mytilus trossulus. We developed a diagnostic gene transcription panel to investigate exposure to PAHs and other contaminants and its effects on mussel physiology and health. During 2012–2015, we analyzed mussels from five field sites in western Prince William Sound, Alaska, with varying oil histories from the 1989 Exxon Valdez oil spill, and from three boat harbors in the area. Gene transcription patterns of mussels from harbors were consistent with elevated exposure to PAHs or other contaminants, whereas transcription patterns of mussels sampled from shorelines in areas affected by the oil spill indicated no PAH exposure.

Analysis of mobile fronthaul bandwidth and wireless transmission performance in split-PHY processing architecture.

PubMed

Miyamoto, Kenji; Kuwano, Shigeru; Terada, Jun; Otaka, Akihiro

2016-01-25

We analyze the mobile fronthaul (MFH) bandwidth and the wireless transmission performance in the split-PHY processing (SPP) architecture, which redefines the functional split of centralized/cloud RAN (C-RAN) while preserving high wireless coordinated multi-point (CoMP) transmission/reception performance. The SPP architecture splits the base stations (BS) functions between wireless channel coding/decoding and wireless modulation/demodulation, and employs its own CoMP joint transmission and reception schemes. Simulation results show that the SPP architecture reduces the MFH bandwidth by up to 97% from conventional C-RAN while matching the wireless bit error rate (BER) performance of conventional C-RAN in uplink joint reception with only 2-dB signal to noise ratio (SNR) penalty.

RANS computations of tip vortex cavitation

NASA Astrophysics Data System (ADS)

Decaix, Jean; Balarac, Guillaume; Dreyer, Matthieu; Farhat, Mohamed; Münch, Cécile

2015-12-01

The present study is related to the development of the tip vortex cavitation in Kaplan turbines. The investigation is carried out on a simplified test case consisting of a NACA0009 blade with a gap between the blade tip and the side wall. Computations with and without cavitation are performed using a R ANS modelling and a transport equation for the liquid volume fraction. Compared with experimental data, the R ANS computations turn out to be able to capture accurately the development of the tip vortex. The simulations have also highlighted the influence of cavitation on the tip vortex trajectory.

The Immune Adaptor SLP-76 Binds to SUMO-RANGAP1 at Nuclear Pore Complex Filaments to Regulate Nuclear Import of Transcription Factors in T Cells.

PubMed

Liu, Hebin; Schneider, Helga; Recino, Asha; Richardson, Christine; Goldberg, Martin W; Rudd, Christopher E

2015-09-03

While immune cell adaptors regulate proximal T cell signaling, direct regulation of the nuclear pore complex (NPC) has not been reported. NPC has cytoplasmic filaments composed of RanGAP1 and RanBP2 with the potential to interact with cytoplasmic mediators. Here, we show that the immune cell adaptor SLP-76 binds directly to SUMO-RanGAP1 of cytoplasmic fibrils of the NPC, and that this interaction is needed for optimal NFATc1 and NF-κB p65 nuclear entry in T cells. Transmission electron microscopy showed anti-SLP-76 cytoplasmic labeling of the majority of NPCs in anti-CD3 activated T cells. Further, SUMO-RanGAP1 bound to the N-terminal lysine 56 of SLP-76 where the interaction was needed for optimal RanGAP1-NPC localization and GAP exchange activity. While the SLP-76-RanGAP1 (K56E) mutant had no effect on proximal signaling, it impaired NF-ATc1 and p65/RelA nuclear entry and in vivo responses to OVA peptide. Overall, we have identified SLP-76 as a direct regulator of nuclear pore function in T cells. Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

Elastic Network Model of a Nuclear Transport Complex

NASA Astrophysics Data System (ADS)

Ryan, Patrick; Liu, Wing K.; Lee, Dockjin; Seo, Sangjae; Kim, Young-Jin; Kim, Moon K.

2010-05-01

The structure of Kap95p was obtained from the Protein Data Bank (www.pdb.org) and analyzed RanGTP plays an important role in both nuclear protein import and export cycles. In the nucleus, RanGTP releases macromolecular cargoes from importins and conversely facilitates cargo binding to exportins. Although the crystal structure of the nuclear import complex formed by importin Kap95p and RanGTP was recently identified, its molecular mechanism still remains unclear. To understand the relationship between structure and function of a nuclear transport complex, a structure-based mechanical model of Kap95p:RanGTP complex is introduced. In this model, a protein structure is simply modeled as an elastic network in which a set of coarse-grained point masses are connected by linear springs representing biochemical interactions at atomic level. Harmonic normal mode analysis (NMA) and anharmonic elastic network interpolation (ENI) are performed to predict the modes of vibrations and a feasible pathway between locked and unlocked conformations of Kap95p, respectively. Simulation results imply that the binding of RanGTP to Kap95p induces the release of the cargo in the nucleus as well as prevents any new cargo from attaching to the Kap95p:RanGTP complex.

Modeling of Complex Coupled Fluid-Structure Interaction Systems in Arbitrary Water Depth

DTIC Science & Technology

2008-01-01

model in a particle finite element method ( PFEM ) based framework for the ALE-RANS solver and submitted a journal paper recently [1]. In the paper, we...developing a fluid-flexible structure interaction model without free surface using ALE-RANS and k-ε turbulence closure model implemented by PFEM . In...the ALE_RANS and k-ε turbulence closure model based on the particle finite element Method ( PFEM ) and obtained some satisfying results [1-2]. The

Measuring What Matters Workshop Report

DTIC Science & Technology

2015-01-14

Measuring What Matters Workshop Report Katie Stewart Julia Allen Michelle Valdez Lisa Young January 2015 TECHNICAL NOTE CMU/SEI-2015-TN...the approach using a simple objective: teaching a child to properly brush his/her teeth. Next, we demonstrate the approach using a cybersecurity...Ensure you child’s teeth are healthy. G1: Ensure your child has everything needed to brush his/her teeth. G2: Ensure your child is brushing his

Measuring What Matters Workshop Report

DTIC Science & Technology

2015-01-01

Measuring What Matters Workshop Report Katie Stewart Julia Allen Michelle Valdez Lisa Young January 2015 TECHNICAL NOTE CMU/SEI-2015-TN...the approach using a simple objective: teaching a child to properly brush his/her teeth. Next, we demonstrate the approach using a cybersecurity...Ensure you child’s teeth are healthy. G1: Ensure your child has everything needed to brush his/her teeth. G2: Ensure your child is brushing his

Evaluation of Mouse Wound Models for Probiotics-Based Wound Infection Prevention Study

DTIC Science & Technology

2016-06-01

Martinez MA, Valdez JC. Bacteriotherapy with Lactobacillus plantarum in burns. Int Wound J. 2009; 6(1):73-81. 3. Valdéz JC, Peral MC, Rachid M...Santana M, Perdigón G. Interference of Lactobacillus plantarum with Pseudomonas aeruginosa in vitro and in infected burns: the potential use of...used. The punch and skin flap models are reproducible murine models for wounding and infection. The use of probiotic ( Lactobacillus reuteri) had

Solomon Gulch hydroelectric project takes shape

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

The planning and current construction activities for the Solomon Gulch hydroelectric plant near Valdez, Alaska which is scheduled for dam completion in 1980 and power plant operation in 1981 are discussed. The main dam will be 115 ft high and 360 ft wide. The two paralled 48-in. dia penstocks will be constructed from surplus pipe left over from the Alaska pipeline project. Construction on the 12 MW plant began in October 1978. (LCL)

Query 3; A Data Base Inquiry System Description and User’s Tutorials.

DTIC Science & Technology

1980-03-01

since Query 3 exists on the ARPANET. These references include: Defense Communications Agency Report NIC 45601, ARPANET Resource Handbook, October 1978...34 T"abular ok:m dIR " biddle dale england fox gridley halsey harry e. yarnell horne josephus daniels jouett leahy reeves richmond k. turner sterett...the terminal, "dwight d. eise... nimitz ainsworth fox reeves valdez dale biddle miller pharris richard e. byrd texas conygham semmes goldsborouqh query

Oil Spills in U.S. Coastal Waters: Background Governance, and Issues for Congress

DTIC Science & Technology

2010-04-30

20 09 G al lo ns OCS Pipelines OCS Facilities Source: Prepared by CRS with data from the Minerals Management Service (MMS) spill database, at http...Fund was particularly vulnerable to a large and costly spill: Fund managers had projected the fund would be completely depleted by FY2009. Recent...which released approximately 11 million gallons of crude oil into Prince William Sound, Alaska. The Exxon Valdez spill—the largest and most expensive

Simulating effects of a wind-turbine array using LES and RANS: Simulating turbines using LES and RANS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vanderwende, Brian J.; Kosović, Branko; Lundquist, Julie K.

2016-08-27

Growth in wind power production has motivated investigation of wind-farm impacts on in situ flow fields and downstream interactions with agriculture and other wind farms. These impacts can be simulated with both large-eddy simulations (LES) and mesoscale wind-farm parameterizations (WFP). The Weather Research and Forecasting (WRF) model offers both approaches. We used the validated generalized actuator disk (GAD) parameterization in WRF-LES to assess WFP performance. A 12-turbine array was simulated using the GAD model and the WFP in WRF. We examined the performance of each scheme in both convective and stable conditions. The GAD model and WFP produced qualitatively similarmore » wind speed deficits and turbulent kinetic energy (TKE) production across the array in both stability regimes, though the magnitudes of velocity deficits and TKE production levels were underestimated and overestimated, respectively. While wake growth slowed in the latter half of the WFP array as expected, wakes did not approach steady state by the end of the array as simulated by the GAD model. A sensitivity test involving the deactivation of explicit TKE production by the WFP resulted in turbulence levels within the array well that were below those produced by the GAD in both stable and unstable conditions. Finally, the WFP overestimated downwind power production deficits in stable conditions because of the lack of wake stabilization in the latter half of the array.« less

Detrital Zircon Geochronology of Cretaceous and Paleogene Strata Across the South-Central Alaskan Convergent Margin

USGS Publications Warehouse

Bradley, Dwight; Haeussler, Peter J.; O'Sullivan, Paul; Friedman, Rich; Till, Alison; Bradley, Dan; Trop, Jeff

2009-01-01

Ages of detrital zircons are reported from ten samples of Lower Cretaceous to Paleogene metasandstones and sandstones from the Chugach Mountains, Talkeetna Mountains, and western Alaska Range of south-central Alaska. Zircon ages are also reported from three igneous clasts from two conglomerates. The results bear on the regional geology, stratigraphy, tectonics, and mineral resource potential of the southern Alaska convergent margin. Chugach Mountains - The first detrital zircon data are reported here from the two main components of the Chugach accretionary complex - the inboard McHugh Complex and the outboard Valdez Group. Detrital zircons from sandstone and two conglomerate clasts of diorite were dated from the McHugh Complex near Anchorage. This now stands as the youngest known part of the McHugh Complex, with an inferred Turonian (Late Cretaceous) depositional age no older than 91-93 Ma. The zircon population has probability density peaks at 93 and 104 Ma and a smattering of Early Cretaceous and Jurassic grains, with nothing older than 191 Ma. The two diorite clasts yielded Jurassic U-Pb zircon ages of 179 and 181 Ma. Together, these findings suggest a Mesozoic arc as primary zircon source, the closest and most likely candidate being the Wrangellia composite terrane. The detrital zircon sample from the Valdez Group contains zircons as young as 69 and 77 Ma, consistent with the previously assigned Maastrichtian to Campanian (Late Cretaceous) depositional age. The zircon population has peaks at 78, 91, 148, and 163 Ma, minor peaks at 129, 177, 330, and 352 Ma, and no concordant zircons older than Devonian. A granite clast from a Valdez Group conglomerate yielded a Triassic U-Pb zircon age of 221 Ma. Like the McHugh Complex, the Valdez Group appears to have been derived almost entirely from Mesozoic arc sources, but a few Precambrian zircons are also present. Talkeetna Mountains - Detrital zircons ages were obtained from southernmost metasedimentary rocks of the

Report of the Hydrographic Service Royal Australian Navy for the Year ended 30th June 1985, Issue Number 21.

DTIC Science & Technology

1985-01-01

Mapping Council which will be held in October 1985. IJS. COMPTONAPTAIN RAN HYDROGRAPHER RAN Accesion For NTIS -CRAMI LDrIC TAB U,.annournced 0 J ...itifcation By .-........ . Di.. t ibution Availability Codes Dit Avail ar-.I or A-1 QUALITYSSPECTED - 2 L. 2. GENERAL The RAN Hydrographic Service, the...FLINDERS used Side Scan Sonar and her diving team to find, and determine the least depths over, the wrecks SAFARI and ERICA J lying on the sea-bed in the

USAWC (US Army War College) Military Studies Program Paper. An Investigation of the Value of Taiwan To Future United States Relations with the People’s Republic of China.

DTIC Science & Technology

1986-02-18

instrum-ent of power in future U.S.- PRC relations. During the 1949-1978 timeframe, U.S.-PRC relations ran the gamut from armed conflict in the Korean...PRC relations ran the gamut from armed conflict in the Korean War to diplomatic relations declared in 1978. The first thawing in relations occurred...PRC relations. US-PRC relations during the 1949-1978 timeframe ran the gamut frou armed conflict during the Korean War to diplomatic recognition. With

EARLY CHILDHOOD PEREFCTIONISM

PubMed Central

Halmi, Katherine A.; Bellace, Dara; Berthod, Samantha; Ghosh, Samiran; Berrettini, Wade; Brandt, Harry A.; Bulik, Cynthia M.; Crawford, Steve; Fichter, Manfred M.; Johnson, Craig L.; Kaplan, Allan; Kaye, Walter H.; Thornton, Laura; Treasure, Janet; Woodside, D. Blake; Strober, Michael

2012-01-01

Objective To examine childhood perfectionism in anorexia nervosa (AN) restricting (RAN), purging (PAN), and binge eating with or without purging (BAN) subtypes. Method The EATATE, a retrospective assessment of childhood perfectionism, and the Eating Disorder Inventory (EDI-2) were administered to 728 AN participants. Results EATATE responses revealed General Childhood Perfectionism, 22.3% of 333 with RAN, 29.2% of 220 with PAN, and 24.8% of 116 with BAN; School Work Perfectionism, 31.2% with RAN, 30.4% with PAN, and 24.8% with BAN; Childhood Order and Symmetry, 18.7% with RAN, 21.7% with PAN, and 17.8% with BAN; and Global Childhood Rigidity, 42.6% with RAN, 48.3% with PAN and 48.1% with BAN. Perfectionism preceded the onset of AN in all subtypes. Significant associations between EDI-2 Drive for Thinness and Body Dissatisfaction were present with four EATATE subscales. Discussion Global Childhood Rigidity was the predominate feature that preceded all AN subtypes. This may be a risk factor for AN. PMID:22488115

Systemic Treatment with Strontium Ranelate Accelerates the Filling of a Bone Defect and Improves the Material Level Properties of the Healing Bone

PubMed Central

Zacchetti, Giovanna; Rizzoli, René

2014-01-01

Rapid bone defect filling with normal bone is a challenge in orthopaedics and dentistry. Strontium ranelate (SrRan) has been shown to in vitro decrease bone resorption and increase bone formation, and represents a potential agent with the capacity to accelerate bone defect filling. In this study, bone tibial defects of 2.5 mm in diameter were created in 6-month-old female rats orally fed SrRan (625 mg/kg/d; 5/7 days) or vehicle for 4, 8, or 12 weeks (10 rats per group per time point) from the time of surgery. Tibias were removed. Micro-architecture was determined by micro-computed tomography (µCT) and material level properties by nanoindentation analysis. µCT analysis showed that SrRan administration significantly improved microarchitecture of trabecular bone growing into the defect after 8 and 12 weeks of treatment compared to vehicle. SrRan treatment also accelerated the growth of cortical bone over the defect, but with different kinetics compared to trabecular bone, as the effects were already significant after 4 weeks. Nanoindentation analysis demonstrated that SrRan treatment significantly increased material level properties of both trabecular bone and cortical bone filling the defect compared to vehicle. SrRan accelerates the filling of bone defect by improving cortical and trabecular bone microarchitecture both quantitatively and qualitatively. PMID:25243150

Evaluation of National Adaptation Planning: A Case Study in Indonesia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kawanishi, Masato; Ridwan, Nadia Amelia

2016-01-01

The present study aims to evaluate national adaptation planning, using the National Action Plan for Climate Change Adaptation (RAN-API) in Indonesia as a case. In doing so, the current study applies the methodology used in Preston et al. (2011), where a set of 57 adaptation plans from three developed countries was evaluated against 19 planning processes. The same criteria and scoring system were applied to the current study to evaluate RAN-API, both as identified in its document and as viewed by the stakeholders. A desktop review and questionnaires were undertaken to this end. It was found that discrepancies exist betweenmore » the status of RAN-API as documented and the stakeholders views of some criteria, suggesting that information or knowledge gaps may still exist despite the efforts made for stakeholder engagement. In some of the other criteria, the stakeholders views match the status as identified in the document. Most notably, they both agree that the weakness of RAN-API is related to limited consideration for non-climatic factors. While the development of RAN-API is a critical step taken in the country, the current study finds that there remains room for further improvement. The criteria or indicators to be used to assess the progress of RAN-API as a whole may need to be further elaborated.« less

Synthesis, characterization, and biocompatibility of alternating block polyurethanes based on PLA and PEG.

PubMed

Mei, Tingzhen; Zhu, Yonghe; Ma, Tongcui; He, Tao; Li, Linjing; Wei, Chiju; Xu, Kaitian

2014-09-01

A series of alternating block polyurethanes (abbreviated as PULA-alt-PEG) and random block polyurethanes (abbreviated as PULA-ran-PEG) based on poly(L-lactic acid) (PLA) and poly(ethylene glycol) (PEG) were synthesized. The differences of PULA-alt/ran-PEG chemical structure, molecular weight, distribution, thermal properties, mechanical properties and static contact angle were systematically investigated. The PULA-alt/ran-PEG polyurethanes exhibited low T(g) (-47.3 ∼ -34.4°C), wide mechanical properties (stress σ(t): 4.6-32.6 MPa, modulus E: 11.4-323.9 MPa and strain ε: 468-1530%) and low water contact angle (35.4-51.4°). Scanning electron microscope (SEM) observation showed that PULA-alt-PEG film displays rougher and more patterned surface morphology than PULA-ran-PEG does, due to more regular structures of PULA-alt-PEG. Hydrolytic degradation shows that degradation rate of random block polyurethane series PULA-ran-PEG is higher than the alternating counterpart PULA-alt-PEG. PLA segment degradation is faster than urethane linkage and PEG segment almost does not degrade in the buffer solution. Platelet adhesion study showed that all the polyurethanes possess excellent hemocompatibility. The cell culture assay revealed that PULA-alt/ran-PEG polyurethanes were cell inert and unfavorable for the attachment of rat glial cell due to the hydrophilic characters of the materials. © 2013 Wiley Periodicals, Inc.

Constraints on the age and provenance of the Chugach accretionary complex from detrital zircons in the Sitka Graywacke near Sitka, Alaska

USGS Publications Warehouse

Haeussler, Peter J.; Gehrels, George E.; Karl, Susan M.

2006-01-01

The Sitka Graywacke is the westernmost and youngest unit of the Chugach accretionary complex in southeastern Alaska. Using laser-ablation inductively coupled plasma mass spectroscopy, we obtained 492 detrital-zircon ages on seven typical samples of Sitka Graywacke turbidites, which were collected in a transect across much of the unit near Sitka, Alaska. Individual grains range in age from 66 to 1,802 m.y. The youngest peak ages on relative-probability plots of the western four samples (74, 72, 74, and 74 m.y., from west to east) are distinctly younger than the youngest peak ages of the eastern three samples (105, 103, and 97 m.y., from west to east). These youngest peak ages set maximum depositional ages for each sample. We suggest that these peak ages are not significantly older (within ~5 m.y.) than the depositional age of the Sitka Graywacke because the deposits accumulated in a trench along a convergent margin, where magmatic sources likely continuously introduced juvenile zircons. The differences in the youngest cluster of detrital-zircon ages between the eastern and western sample localities is likely due to both a change in provenance and a fault. The similarity of the youngest peak ages in the Sitka Graywacke to fossil ages in the Valdez Group, in Prince William Sound, implies that the western part of the Sitka Graywacke is correlative with the Valdez Group, as previously inferred. However, the eastern part of the Sitka Graywacke has youngest detrital-zircon ages older than fossil ages in the Valdez Group and younger than fossil ages in the McHugh Complex, which in south-central Alaska is the oldest part of the accretionary complex. The age distribution of zircons in the older, eastern sequence suggests sources along the British Columbia margin. The detrital-zircon ages in the younger, western sequence are similar to igneous ages from south-central Alaska to southern British Columbia. Right-lateral strike slip on various fault systems inboard of the Sitka

Detached-Eddy Simulation Based on the v2-f Model

NASA Technical Reports Server (NTRS)

Jee, Sol Keun; Shariff, Karim

2012-01-01

Detached eddy simulation (DES) based on the v2-f RANS model is proposed. This RANS model incorporates the anisotropy of near-wall turbulence which is absent in other RANS models commonly used in the DES community. In LES mode, the proposed DES formulation reduces to a transport equation for the subgrid-scale kinetic energy. The constant, CDES, required by this model was calibrated by simulating isotropic turbulence. In the final paper, DES simulations of canonical separated flows will be presented.

AKT activation drives the nuclear localization of CSE1L and a pro-oncogenic transcriptional activation in ovarian cancer cells

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lorenzato, Annalisa; Biolatti, Marta; Institute for Cancer Research at Candiolo, Candiolo, Torino

The human homolog of the yeast cse1 gene (CSE1L) is over-expressed in ovarian cancer. CSE1L forms complex with Ran and importin-α and has roles in nucleocytoplasmic traffic and gene expression. CSE1L accumulated in the nucleus of ovarian cancer cell lines, while it was localized also in the cytoplasm of other cancer cell lines. Nuclear localization depended on AKT, which was constitutively active in ovarian cancer cells, as the CSE1L protein translocated to the cytoplasm when AKT was inactivated. Moreover, the expression of a constitutively active AKT forced the translocation of CSE1L from the cytoplasm to the nucleus in other cancermore » cells. Nuclear accrual of CSE1L was associated to the nuclear accumulation of the phosphorylated Ran Binding protein 3 (RanBP3), which depended on AKT as well. Also in samples of human ovarian cancer, AKT activation was associated to nuclear accumulation of CSE1L and phosphorylation of RanBP3. Expression profiling of ovarian cancer cells after CSE1L silencing showed that CSE1L was required for the expression of genes promoting invasion and metastasis. In agreement, CSE1L silencing impaired motility and invasiveness of ovarian cancer cells. Altogether these data show that in ovarian cancer cells activated AKT by affecting RanBP3 phosphorylation determines the nuclear accumulation of CSE1L and likely the nuclear concentration of transcription factors conveying pro-oncogenic signals. - highlights: • CSE1L is a key player in nucleocytoplasmic traffic by forming complex with Ran. • AKT phosphorylates RanBP3 that regulates the nucleocytoplasmic gradient of Ran. • The activated oncogenic AKT drives the nuclear accumulation of CSE1L. • CSE1L in the nucleus up-regulates genes conveying pro-oncogenic signals. • CSE1L might contribute to tumor progression driven by the activated oncogenic AKT.« less

Real-Life Experience with Aflibercept and Ranibizumab in the Treatment of Newly Diagnosed Neovascular Age-Related Macular Degeneration over 24 Months.

PubMed

Garweg, Justus G; Gerhardt, Christin; Kodjikian, Laurent; Pfister, Isabel B

2017-09-01

Comparative data appertaining to the long-term effects of Aflibercept or Ranibizumab in newly diagnosed cases of neovascular age-related macular degeneration (nAMD) over follow-up periods exceeding 12 months in clinical routine are scarce. In this retrospective comparative analysis, a case series of patients with treatment-naïve nAMD and requiring anti-vascular endothelial growth factor (VEGF) therapy in a routine clinical setting were treated with either Aflibercept [Afl (n = 106)] or Ranibizumab [Ran (n = 47)]. During the drug-loading phase, 3 monthly injections were administered. Thereafter, a treat-and-extend protocol was pursued for a maximum of 24 months. Ran was administered predominantly in eyes with classical lesions; Afl was administered in all others. The primary outcome parameters included anatomical and functional stability after 24 months. Patients were comparable regarding age, gender distribution, and lens status. Fewer patients presented with intraretinal fluid in the Afl- than in the Ran group at diagnosis (46.2% vs. 67.4%; P = 0.02), but not after the drug-loading phase. After the drug-loading phase, visual acuity [-4.2 letters (Afl) vs. -4.5 letters (Ran); P = 0.78] and the central foveal thickness remained stable. Linked to the lesion type, the number of scheduled clinical visits during the course of 24 months was higher for the Ran- than for the Afl group [11.9 ± 4.7 visits (Ran) vs. 8.4 ± 3.1 visits (Afl); P = 0.0005]. However, the total number of injections was similar [10.5 ± 2.8 (Ran) vs. 11.7 ± 3.6 (Afl); P = 0.06]. Based on tailoring according to the lesion type in cases of nAMD, the anatomical and the functional outcomes of treatment with either Afl or Ran were comparable for a maximum of 2 years.

DOE Office of Scientific and Technical Information (OSTI.GOV)

DeGange, A.R.; Douglas, D.C.; Monson, D.H.

Sea otter (Enhydra lutris) abundance and distribution in the Gulf of Alaska west of Prince William Sound were surveyed by helicopter in the spring of 1989 at the time of the Exxon Valdez oil spill and the following fall. Estimated population sizes did not significantly decline between spring and fall for areas with comparable survey data. No significant (p>0.05) shifts of sea otter distributions in heavily, lightly and unoiled areas were detected between spring and fall surveys.

Adequacy of nutrient intake in women with restrictive anorexia nervosa.

PubMed

Chiurazzi, Chiara; Cioffi, Iolanda; De Caprio, Carmela; De Filippo, Emilia; Marra, Maurizio; Sammarco, Rosa; Di Guglielmo, Maria Luisa; Contaldo, Franco; Pasanisi, Fabrizio

2017-06-01

The aim of the present study was to assess energy and nutrient intake in a group of women with restrictive AN (r-AN) compared with a control group. Thirteen r-AN patients and 13 healthy female controls completed 7-d food records. Intake of macro- and micronutrients was compared between the two groups as well as to the Dietary Reference Intake for the Italian Population (LARN) for specific ages. Additionally, the r-AN patients underwent indirect calorimetry for measuring resting energy expenditure (REE). Total energy intake was significantly lower in the r-AN group than in controls (906 ± 224 vs 1660 ± 139, respectively; P < 0.01). Nutrient composition significantly differed, as well. Mean intake of sodium, phosphorus, and zinc was higher in controls than in the women with r-AN (P < 0.01), but neither group of women met LARN recommendations for potassium, calcium, or iron intake. With respect to vitamins, no significant differences were found for riboflavin or vitamins A, B 12 , or C between groups, whereas levels of other vitamins differed (P < 0.01). Both groups failed to meet the LARN recommendation for vitamin D intake; moreover, none of the r-AN patients met recommended intake levels of vitamin E, thiamine, niacin, and folate. Intakes reported by r-AN patients did not meet requirements for most micronutrients evaluated in this study and, as expected, both energy needs and specific dietary patterns differed between groups. Therefore, a careful evaluation of food consumption should be recommended to reduce nutritional gaps in these patients. According to these preliminary observations, nutritional counseling, mainly focused on calcium and vitamin D intake, should be suggested for healthy women, as well. Copyright © 2017 Elsevier Inc. All rights reserved.

Angina Relief by Ranolazine Identifies False-Negative SPECT Myocardial Perfusion Scans in Patients with Coronary Disease Demonstrated by Coronary Angiography.

PubMed

Murray, Gary L

2014-09-01

Normal myocardial perfusion imaging (MPI) reduces intermediate- or high-risk pretest probability patients to low- or intermediate-risk posttest probability, respectively, for coronary disease (CD). Since ranolazine (RAN) relieves only angina, anginal patients with normal MPI whose angina is relieved by RAN present a significant dilemma. The purpose of this retrospective chart review was to confirm the impression that coronary angiography (CA) is indicated in patients whose class 3 to 4 angina is relieved by RAN, but have normal myocardial single-photon emission computed tomography (SPECT) MPIs. Charts of patients with stable class 3 to 4 angina (typical and atypical) and normal MPIs (left ventricular ejection fraction [LVEF] ≥50% and segmental score = 0) were reviewed. CA was done on all the patients with complete angina relief taking RAN, as well as nonresponders whose anginal etiology could not be explained. Stenoses were considered flow-restrictive when more than 70% diameter stenosis is observed by quantitative CA, or, when 50 to 70%, fractional flow reserve (FFR) measured ≤0.80. RAN relieved angina in 36 of 54 (67%) patients. Of the known cases, 25 of these 36 (69%) had 43 stenoses ≥50% (mean = 66%): 15 (60%) had 1 vessel disease; 9 (36%) had multivessel disease; 18 (72%) had left anterior descending (LAD) disease; 1 (4%) had left main disease. Twenty one of 43 (49%) stenosis were > 70%; 22 (51%) stenoses were 50 to 70% and required FFR measurement. Twenty nine of 43 stenoses (67%) were considered flow-restrictive in 18 of these 25 (72%) patients. Eight RAN nonresponders with no explanation for angina had no CD at CA. RAN angina relief is invaluable in identifying falsely negative SPECT MPI, and 50% of these patients have flow-restrictive stenoses.

Large Eddy Simulation and Reynolds-Averaged Navier-Stokes modeling of flow in a realistic pharyngeal airway model: an investigation of obstructive sleep apnea.

PubMed

Mihaescu, Mihai; Murugappan, Shanmugam; Kalra, Maninder; Khosla, Sid; Gutmark, Ephraim

2008-07-19

Computational fluid dynamics techniques employing primarily steady Reynolds-Averaged Navier-Stokes (RANS) methodology have been recently used to characterize the transitional/turbulent flow field in human airways. The use of RANS implies that flow phenomena are averaged over time, the flow dynamics not being captured. Further, RANS uses two-equation turbulence models that are not adequate for predicting anisotropic flows, flows with high streamline curvature, or flows where separation occurs. A more accurate approach for such flow situations that occur in the human airway is Large Eddy Simulation (LES). The paper considers flow modeling in a pharyngeal airway model reconstructed from cross-sectional magnetic resonance scans of a patient with obstructive sleep apnea. The airway model is characterized by a maximum narrowing at the site of retropalatal pharynx. Two flow-modeling strategies are employed: steady RANS and the LES approach. In the RANS modeling framework both k-epsilon and k-omega turbulence models are used. The paper discusses the differences between the airflow characteristics obtained from the RANS and LES calculations. The largest discrepancies were found in the axial velocity distributions downstream of the minimum cross-sectional area. This region is characterized by flow separation and large radial velocity gradients across the developed shear layers. The largest difference in static pressure distributions on the airway walls was found between the LES and the k-epsilon data at the site of maximum narrowing in the retropalatal pharynx.

Accord near for offshore California oil shipments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

There are faint glimmers of hope again for offshore California operators. After more than a decade of often bitter strife over offshore oil and gas development and transportation issues, state officials and oil producers may be moving toward compromise solutions. One such solution may be forthcoming on offshore development. But the real change came with the turnabout of the California Coastal Commission (CCC), which last month approved a permit for interim tankering of crude from Point Arguello oil field in the Santa Barbara Channel to Los Angeles. The dispute over how to ship offshore California crude to market has draggedmore » on since before Point Arguelo development plans were unveiled. The project's status has become a flashpoint in the U.S. debate over resource use and environmental concerns. The controversy flared anew in the wake of the 1989 Exxon Valdez tanker spill off Alaska, when CCC voided a Santa Barbara County permit for interim tankering, a move project operator Chevron Corp. linked to the Exxon Valdez accident. Faced with litigation, the state's economic devastation, and acrimonious debate over transporting California crude, Gov. Pete Wilson and other agencies approved the CCC permit. But there's a catch: A permanent pipeline must be built to handle full production within 3 years. The paper discusses permit concerns, the turnaround decision, the anger of environmental groups, and pipeline proposals.« less

Discovery of a biomarker and lead small molecules to target r(GGGGCC)-associated defects in c9FTD/ALS.

PubMed

Su, Zhaoming; Zhang, Yongjie; Gendron, Tania F; Bauer, Peter O; Chew, Jeannie; Yang, Wang-Yong; Fostvedt, Erik; Jansen-West, Karen; Belzil, Veronique V; Desaro, Pamela; Johnston, Amelia; Overstreet, Karen; Oh, Seok-Yoon; Todd, Peter K; Berry, James D; Cudkowicz, Merit E; Boeve, Bradley F; Dickson, Dennis; Floeter, Mary Kay; Traynor, Bryan J; Morelli, Claudia; Ratti, Antonia; Silani, Vincenzo; Rademakers, Rosa; Brown, Robert H; Rothstein, Jeffrey D; Boylan, Kevin B; Petrucelli, Leonard; Disney, Matthew D

2014-09-03

A repeat expansion in C9ORF72 causes frontotemporal dementia and amyotrophic lateral sclerosis (c9FTD/ALS). RNA of the expanded repeat (r(GGGGCC)exp) forms nuclear foci or undergoes repeat-associated non-ATG (RAN) translation, producing "c9RAN proteins." Since neutralizing r(GGGGCC)exp could inhibit these potentially toxic events, we sought to identify small-molecule binders of r(GGGGCC)exp. Chemical and enzymatic probing of r(GGGGCC)8 indicate that it adopts a hairpin structure in equilibrium with a quadruplex structure. Using this model, bioactive small molecules targeting r(GGGGCC)exp were designed and found to significantly inhibit RAN translation and foci formation in cultured cells expressing r(GGGGCC)66 and neurons transdifferentiated from fibroblasts of repeat expansion carriers. Finally, we show that poly(GP) c9RAN proteins are specifically detected in c9ALS patient cerebrospinal fluid. Our findings highlight r(GGGGCC)exp-binding small molecules as a possible c9FTD/ALS therapeutic and suggest that c9RAN proteins could potentially serve as a pharmacodynamic biomarker to assess efficacy of therapies that target r(GGGGCC)exp. Copyright © 2014 Elsevier Inc. All rights reserved.

Discovery of a Biomarker and Lead Small Molecules to Target r(GGGGCC)-Associated Defects in c9FTD/ALS

PubMed Central

Su, Zhaoming; Zhang, Yongjie; Gendron, Tania F.; Bauer, Peter O.; Chew, Jeannie; Yang, Wang-Yong; Fostvedt, Erik; Jansen-West, Karen; Belzil, Veronique V.; Desaro, Pamela; Johnston, Amelia; Overstreet, Karen; Oh, Seok-Yoon; Todd, Peter K.; Berry, James D.; Cudkowicz, Merit E.; Boeve, Bradley F.; Dickson, Dennis; Floeter, Mary Kay; Traynor, Bryan J.; Morelli, Claudia; Ratti, Antonia; Silani, Vincenzo; Rademakers, Rosa; Brown, Robert H.; Rothstein, Jeffrey D.; Boylan, Kevin B.; Petrucelli, Leonard; Disney, Matthew D.

2014-01-01

Summary A repeat expansion in C9ORF72 causes frontotemporal dementia and amyotrophic lateral sclerosis (c9FTD/ALS). RNA of the expanded repeat (r(GGGGCC)exp) forms nuclear foci or undergoes repeat-associated non-ATG (RAN) translation producing “c9RAN proteins”. Since neutralizing r(GGGGCC)exp could inhibit these potentially toxic events, we sought to identify small molecule binders of r(GGGGCC)exp. Chemical and enzymatic probing of r(GGGGCC)8 indicate it adopts a hairpin structure in equilibrium with a quadruplex structure. Using this model, bioactive small molecules targeting r(GGGGCC)exp were designed and found to significantly inhibit RAN translation and foci formation in cultured cells expressing r(GGGGCC)66 and neurons trans-differentiated from fibroblasts of repeat expansion carriers. Finally, we show that poly(GP) c9RAN proteins are specifically detected in c9ALS patient cerebrospinal fluid. Our findings highlight r(GGGGCC)exp-binding small molecules as a possible c9FTD/ALS therapeutic, and suggest c9RAN proteins could potentially serve as a pharmacodynamic biomarker to assess efficacy of therapies that target r(GGGGCC)exp. PMID:25132468

Phonological Awareness and Rapid Automatized Naming Predicting Early Development in Reading and Spelling: Results from a Cross-Linguistic Longitudinal Study

PubMed Central

Furnes, Bjarte; Samuelsson, Stefan

2010-01-01

In this study, the relationship between latent constructs of phonological awareness (PA) and rapid automatized naming (RAN) were investigated and related to later measures of reading and spelling in children learning to read in different alphabetic writing systems (i.e., Norwegian/Swedish vs. English). 750 U.S./Australian children and 230 Scandinavian children were followed longitudinally between kindergarten and 2nd grade. PA and RAN were measured in kindergarten and Grade 1, while word recognition, phonological decoding, and spelling were measured in kindergarten, Grade 1, and Grade 2. In general, high stability was observed for the various reading and spelling measures, such that little additional variance was left open for PA and RAN. However, results demonstrated that RAN was more related to reading than spelling across orthographies, with the opposite pattern shown for PA. In addition, tests of measurement invariance show that the factor loadings of each observed indicator on the latent PA factor was the same across U.S./Australia and Scandinavia. Similar findings were obtained for RAN. In general, tests of structural invariance show that models of early literacy development are highly transferable across languages. PMID:21359098

Mediating Effects of Working Memory in the Relation Between Rapid Automatized Naming and Chinese Reading Comprehension.

PubMed

Weng, Xiaoqian; Li, Guangze; Li, Rongbao

2016-08-01

This study examined the mediating role of working memory (WM) in the relation between rapid automatized naming (RAN) and Chinese reading comprehension. Three tasks assessing differentially visual and verbal components of WM were programmed by E-prime 2.0. Data collected from 55 Chinese college students were analyzed using correlations and hierarchical regression methods to determine the connection among RAN, reading comprehension, and WM components. Results showed that WM played a significant mediating role in the RAN-reading relation and that auditory WM made stronger contributions than visual WM. Taking into account of the multi-component nature of WM and the specificity of Chinese reading processing, this study discussed the mediating powers of the WM components, particularly auditory WM, further clarifying the possible components involved in the RAN-reading relation and thus providing some insight into the complicated Chinese reading process.

Year 1 of the Washington nighttime seat belt enforcement program : traffic tech.

DOT National Transportation Integrated Search

2010-09-01

The first year of the Washington nighttime belt program : ran from May 2007 through May 2008. During this period, WTSC ran three, two-week nighttime seat belt enforcement : campaigns. The primary message of the ad was that extra : seat-belt-focuse...

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

The goal of the project was to determine whether the Exxon Valdez oil spill (EVOS) had a measurable impact on harbor seals, Phocavitulina richardsi, in Prince William Sound (PWS) and adjacent areas. During the EVOS, harbor seals were exposed to oil both in the water and on land. The study was designed to investigate and quantify, as possible, the effects of oil and the disturbance associated with cleanup on distribution, abundance, and health of harbor seals in the affected area.

Reconnaissance bedrock geology of the southeastern part of the Kenai quadrangle, Alaska: A section in Geologic studies in Alaska by the U.S. Geological Survey, 1998

USGS Publications Warehouse

Bradley, Dwight C.; Wilson, Frederic H.

2000-01-01

We present a new reconnaissance geologic map of the southeastern part of the Kenai quadrangle that improves on previously published maps. Melange of the McHugh Complex is now known to form a continuous strike belt that can be traced from the Seldovia to the Valdez quadrangle; a problematic 75-km-long gap in the McHugh Complex in the Kenai and Seldovia quadrangles does not exist. An Eocene near-trench pluton underlies a range of nunataks in Harding Icefield.

Should Non Department of Defense Meteorological Satellites Be Used to Meet Department of Defense Environmental Requirements?

DTIC Science & Technology

2003-06-06

Information Support laboratory, Geostationary Operational Meteorological Satellite. (Moscow, RU: SMIS IKI RAN and SRC PLANETA , January 2003); Internet...Operational Meteorological Satellite. Moscow, RU: SMIS IKI RAN and SRC PLANETA , January 2003. Squitieri, Tom. “In Bosnia, Weather is primary Foe”. USA Today

Spatiotemporal Regulation of Nuclear Transport Machinery and Microtubule Organization

PubMed Central

Okada, Naoyuki; Sato, Masamitsu

2015-01-01

Spindle microtubules capture and segregate chromosomes and, therefore, their assembly is an essential event in mitosis. To carry out their mission, many key players for microtubule formation need to be strictly orchestrated. Particularly, proteins that assemble the spindle need to be translocated at appropriate sites during mitosis. A small GTPase (hydrolase enzyme of guanosine triphosphate), Ran, controls this translocation. Ran plays many roles in many cellular events: nucleocytoplasmic shuttling through the nuclear envelope, assembly of the mitotic spindle, and reorganization of the nuclear envelope at the mitotic exit. Although these events are seemingly distinct, recent studies demonstrate that the mechanisms underlying these phenomena are substantially the same as explained by molecular interplay of the master regulator Ran, the transport factor importin, and its cargo proteins. Our review focuses on how the transport machinery regulates mitotic progression of cells. We summarize translocation mechanisms governed by Ran and its regulatory proteins, and particularly focus on Ran-GTP targets in fission yeast that promote spindle formation. We also discuss the coordination of the spatial and temporal regulation of proteins from the viewpoint of transport machinery. We propose that the transport machinery is an essential key that couples the spatial and temporal events in cells. PMID:26308057

RAN Translation as a Therapeutic in ALS

DTIC Science & Technology

2017-05-01

allow for HTS via CRISPR or drug screens to complement the in vitro screens using high-throughput microscopy or FACS. Figure 5: Mammalian G4C2...poly-GP in yeast (Figure 6A). [filler about RPS25 here?] This effect was further investigated in mammalian Hap1 cell lines with a CRISPR -mediated

Relationships among Rapid Digit Naming, Phonological Processing, Motor Automaticity, and Speech Perception in Poor, Average, and Good Readers and Spellers

ERIC Educational Resources Information Center

Savage, Robert S.; Frederickson, Norah; Goodwin, Roz; Patni, Ulla; Smith, Nicola; Tuersley, Louise

2005-01-01

In this article, we explore the relationship between rapid automatized naming (RAN) and other cognitive processes among below-average, average, and above-average readers and spellers. Nonsense word reading, phonological awareness, RAN, automaticity of balance, speech perception, and verbal short-term and working memory were measured. Factor…

Processes in the Development of Mathematics in Kindergarten Children from Title 1 Schools

ERIC Educational Resources Information Center

Foster, Matthew E.; Anthony, Jason L.; Clements, Doug H.; Sarama, Julie H.

2015-01-01

This study examined how well nonverbal IQ (or fluid intelligence), vocabulary, phonological awareness (PA), rapid autonomized naming (RAN), and phonological short-term memory (STM) predicted mathematics outcomes. The 208 participating kindergartners were administered tests of fluid intelligence, vocabulary, PA, RAN, STM, and numeracy in the fall…

Prince William Sound disabled tanker towing study. Part 1. Evaluation of existing equipment, personnel and procedures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1993-08-01

The study has been undertaken by the Glosten Associates, Inc., to evaluate the existing capability for emergency towing at Prince William Sound and to examine alternatives that could enhance the escort and assist capabilities for disabled tankers within the waterway from the Alyeska Oil Terminal at the Port of Valdez to the Gulf of Alaska outside Hinchinbrook Entrance. Part 1, reported herein, is an objective evaluation by an experienced salvage towing master of the existing tugs, emergency towing equipment, towing practices, and discussion of alternative tug types.

Constitutional Thinness and Anorexia Nervosa: A Possible Misdiagnosis?

PubMed Central

Estour, Bruno; Galusca, Bogdan; Germain, Natacha

2014-01-01

Clinical and biological aspects of restrictive anorexia nervosa (R-AN) are well documented. More than 10,000 articles since 1911 and more than 600 in 2013 have addressed R-AN psychiatric, somatic, and biological aspects. Genetic background, ineffectiveness of appetite regulating hormones on refeeding process, bone loss, and place of amenorrhea in the definition are widely discussed and reviewed. Oppositely, constitutional thinness (CT) is an almost unknown entity. Only 32 articles have been published on this topic since 1953. Similar symptoms associating low body mass index, low fat, and bone mass are reported in both CT and R-AN subjects. Conversely, menses are preserved in CT women and almost the entire hormonal profile is normal, except for leptin and PYY. The aim of the present review is to alert the clinician on the confusing clinical presentation of these two situations, a potential source of misdiagnosis, especially since R-AN definition has changed in DSM5. PMID:25368605

Constitutional thinness and anorexia nervosa: a possible misdiagnosis?

PubMed

Estour, Bruno; Galusca, Bogdan; Germain, Natacha

2014-01-01

Clinical and biological aspects of restrictive anorexia nervosa (R-AN) are well documented. More than 10,000 articles since 1911 and more than 600 in 2013 have addressed R-AN psychiatric, somatic, and biological aspects. Genetic background, ineffectiveness of appetite regulating hormones on refeeding process, bone loss, and place of amenorrhea in the definition are widely discussed and reviewed. Oppositely, constitutional thinness (CT) is an almost unknown entity. Only 32 articles have been published on this topic since 1953. Similar symptoms associating low body mass index, low fat, and bone mass are reported in both CT and R-AN subjects. Conversely, menses are preserved in CT women and almost the entire hormonal profile is normal, except for leptin and PYY. The aim of the present review is to alert the clinician on the confusing clinical presentation of these two situations, a potential source of misdiagnosis, especially since R-AN definition has changed in DSM5.

[Usefulness and limitations of rapid automatized naming to predict reading difficulties after school entry in preschool children].

PubMed

Kaneko, Masato; Uno, Akira; Haruhara, Noriko; Awaya, Noriko

2012-01-01

We investigated the usability and limitations of Rapid Automatized Naming (RAN) results in 6-year-old Japanese preschool children to estimate whether reading difficulties will be encountered after school entry. We administered a RAN task to 1,001 preschool children. Then after they had entered school, we performed follow-up surveys yearly to assess their reading performance when these children were in the first, second, third and fourth grades. Also, we examined Hiragana non-words and Kanji words at each time point to detect the children who were having difficulty with reading Hiragana and Kanji. Results by Receiver Operating Characteristic analysis showed that the RAN result in 6-year-old preschool children was predictive of Kanji reading difficulty in the lower grades of elementary school, especially in the second grade with a probability of 0.86, and the area under the curve showed a probability of 0.84 in the third grade. These results suggested that the RAN task was useful as a screening tool.

The Weddell Sea

NASA Technical Reports Server (NTRS)

2002-01-01

Several large, irregularly shaped icebergs are floating in the Weddell Sea, east of the Antarctic Peninsula, in this true-color MODIS image from February 17, 2002. The location of several of the bergs has changed little over the last three months. Compared to an image acquired on November 13, 2001, the berg at the upper right of the image has spun around, but is still hanging around in the same general location. Similar slow-movers can be seen just to the east of the Larsen Ice Shelf, which hugs the eastern coast of the Peninsula. The northernmost of those two bergs is designated A38b; the southernmost one is A38a. These bergs were once part of an iceberg greater than 2,700 square miles that broke off the Ronne Ice Shelf (to the south) back in 1998. While the waters of the Weddell Sea in the area ought to be deep enough to float those bergs, it is possible that they have run aground on a topographic high, or ridge, in the sea floor. However, little is known about the underwater topography of that region, and it is also possible that the bergs are simply so massive that they resist being moved by surface wind or ocean currents. While four years might seem like a long time for an iceberg to hang around, these are certainly no record holders. A berg that broke off the Ross Ice Shelf (on the other side of Antarctica) drifted north and went aground south of Australia. That berg calved in 1987, and hasn't really moved in ten years. While the big bergs have not moved much in the span of time between these images, there is a big difference in the amount of sea ice present in the two images. In general, the rounder chunks of ice are more likely to be seasonal sea ice that forms from the freezing of sea water, while the larger, jagged-edged pieces of ice are more likely to be bergs that broke off an ice shelf at the margin of the continent. It's the height of summer in Antarctica in the February image, and much of the sea ice has melted or drifted away, leaving a relatively

Training Letter and Orthographic Pattern Recognition in Children with Slow Naming Speed

ERIC Educational Resources Information Center

Conrad, Nicole J.; Levy, Betty Ann

2011-01-01

Although research has established that performance on a rapid automatized naming (RAN) task is related to reading, the nature of this relationship is unclear. Bowers (2001) proposed that processes underlying performance on the RAN task and orthographic knowledge make independent and additive contributions to reading performance. We examined the…

The Influence of Inattention on Rapid Automatized Naming and Reading Skills

ERIC Educational Resources Information Center

Pham, Andy V.

2010-01-01

The purpose of this study is to determine how behavioral symptoms of inattention predict rapid automatized naming (RAN) performance and reading skills in typically developing children. Participants included 104 third- and fourth-grade children from different elementary schools in mid-Michigan. RAN performance was assessed using the four Rapid…

Cognitive Mechanism Underlying the Relationship between Rapid Automatized Naming and Reading: A Longitudinal Study on Bilingual Children

ERIC Educational Resources Information Center

Yeung, Susanna S.

2016-01-01

Rapid automatized naming has been demonstrated as an important correlate of various reading outcomes. However, the cognitive mechanism underlying the RAN-reading relationship is not well understood. The primary goal of this study is to evaluate three major theoretical accounts for the RAN--reading relationship: phonological processing account,…

Large Eddy/Reynolds-Averaged Navier-Stokes Simulations of CUBRC Base Heating Experiments

NASA Technical Reports Server (NTRS)

Salazar, Giovanni; Edwards, Jack R.; Amar, Adam J.

2012-01-01

ven with great advances in computational techniques and computing power during recent decades, the modeling of unsteady separated flows, such as those encountered in the wake of a re-entry vehicle, continues to be one of the most challenging problems in CFD. Of most interest to the aerothermodynamics community is accurately predicting transient heating loads on the base of a blunt body, which would result in reduced uncertainties and safety margins when designing a re-entry vehicle. However, the prediction of heat transfer can vary widely depending on the turbulence model employed. Therefore, selecting a turbulence model which realistically captures as much of the flow physics as possible will result in improved results. Reynolds Averaged Navier Stokes (RANS) models have become increasingly popular due to their good performance with attached flows, and the relatively quick turnaround time to obtain results. However, RANS methods cannot accurately simulate unsteady separated wake flows, and running direct numerical simulation (DNS) on such complex flows is currently too computationally expensive. Large Eddy Simulation (LES) techniques allow for the computation of the large eddies, which contain most of the Reynolds stress, while modeling the smaller (subgrid) eddies. This results in models which are more computationally expensive than RANS methods, but not as prohibitive as DNS. By complimenting an LES approach with a RANS model, a hybrid LES/RANS method resolves the larger turbulent scales away from surfaces with LES, and switches to a RANS model inside boundary layers. As pointed out by Bertin et al., this type of hybrid approach has shown a lot of promise for predicting turbulent flows, but work is needed to verify that these models work well in hypersonic flows. The very limited amounts of flight and experimental data available presents an additional challenge for researchers. Recently, a joint study by NASA and CUBRC has focused on collecting heat transfer data

Assessment of mineral resource tracts in the Chugach National Forest, Alaska

USGS Publications Warehouse

Nelson, Steven W.; Miller, Marti L.

2000-01-01

Locatable minerals have been produced from the Chugach National Forest (CNF) for nearly 100 years. Past gold production has come from the Kenai Peninsula and the Girdwood, Port Wells, and Valdez areas. Copper and by-product gold and silver have been produced from mines at Ellamar, on Latouche Island, and near Valdez. Many of the past-producing properties were not mined out and contain significant inferred reserves of gold, copper, lead, zinc, and silver. This report outlines mineral resource areas (tracts) that contain both identified and undiscovered mineral resources. These tracts were drawn on the basis of one or more of the following criteria: (1) geochemical anomalies, (2) favorable geologic units, (3) presence of mines, prospects or mineral occurrences, and (4) geophysical anomalies. Bliss (1989) used six mineral deposit models to describe the types of deposits known from the CNF. Of these deposit types, only four are sufficiently known and defined in the CNF to be suitable for consideration in outlining and ranking of mineral resource tracts; these deposit types are: (1) Cyprus-type massive sulfide, (2) Chugach-type low-sulfide goldquartz veins, (3) placer gold, and (4) polymetallic vein. The U.S. Bureau of Mines indicated that most of the inferred mineral reserves in the CNF would not be economic to produce under current prices. Small-scale placer gold operations are a possible exception. Other known resources that have recorded past production (oil, coal, rock, sand, and gravel) are not addressed in this report.

Multicomponent Treatment of Rapid Naming, Reading Rate, and Visual Attention in Single and Double Deficit Dyslexics

ERIC Educational Resources Information Center

Johnson, Kary A.

2013-01-01

While the relationship between rapid automatic naming (RAN) deficiencies and dyslexia (reading disability) is well developed and supported in the behavioral and medical research literature to date, direct treatment of the specific RAN deficiency in addition to subsequently poor reading outcomes in the lexical skill of reading rate and the…

Component Processes Subserving Rapid Automatized Naming in Dyslexic and Non-Dyslexic Readers

ERIC Educational Resources Information Center

Araujo, Susana; Inacio, Filomena; Francisco, Ana; Faisca, Luis; Petersson, Karl Magnus; Reis, Alexandra

2011-01-01

The current study investigated which time components of rapid automatized naming (RAN) predict group differences between dyslexic and non-dyslexic readers (matched for age and reading level), and how these components relate to different reading measures. Subjects performed two RAN tasks (letters and objects), and data were analyzed through a…

Multiple Mediation Analysis of the Relationship between Rapid Naming and Reading

ERIC Educational Resources Information Center

Poulsen, Mads; Juul, Holger; Elbro, Carsten

2015-01-01

It is well established that rapid automatised naming (RAN) correlates with reading ability. Despite several attempts, no single component process (mediator) has been identified that fully accounts for the correlation. The present paper estimated the explanatory value of several mediators for the RAN--reading correlation. One hundred and sixty-nine…

Phoneme Awareness, Visual-Verbal Paired-Associate Learning, and Rapid Automatized Naming as Predictors of Individual Differences in Reading Ability

ERIC Educational Resources Information Center

Warmington, Meesha; Hulme, Charles

2012-01-01

This study examines the concurrent relationships between phoneme awareness, visual-verbal paired-associate learning, rapid automatized naming (RAN), and reading skills in 7- to 11-year-old children. Path analyses showed that visual-verbal paired-associate learning and RAN, but not phoneme awareness, were unique predictors of word recognition,…

Pilot Study for Standardizing Rapid Automatized Naming and Rapid Alternating Stimulus Tests in Arabic

ERIC Educational Resources Information Center

Abu-Hamour, Bashir

2013-01-01

This study examined the acceptability, reliability, and validity of the Arabic translated version of the Rapid Automatized Naming and Rapid Alternating Stimulus Tests (RAN/RAS; Wolf & Denckla, 2005) for Jordanian students. RAN/RAS tests are a vital assessment tool to distinguish good readers from poor readers. These tests have been…

What Automaticity Deficit? Activation of Lexical Information by Readers with Dyslexia in a Rapid Automatized Naming Stroop-Switch Task

ERIC Educational Resources Information Center

Jones, Manon W.; Snowling, Margaret J.; Moll, Kristina

2016-01-01

Reading fluency is often predicted by rapid automatized naming (RAN) speed, which as the name implies, measures the automaticity with which familiar stimuli (e.g., letters) can be retrieved and named. Readers with dyslexia are considered to have less "automatized" access to lexical information, reflected in longer RAN times compared with…

Design and Integration of a Rotor Alone Nacelle for Acoustic Fan Testing

NASA Technical Reports Server (NTRS)

Shook, Tony D.; Hughes, Christoper E.; Thompson, William K.; Tavernelli, Paul F.; Cunningham, Cameron C.; Shah, Ashwin

2001-01-01

A brief summary of the design, integration and testing of a rotor alone nacelle (RAN) in NASA Glenn's 9'x 15' Low Speed Wind Tunnel (LSWT) is presented. The purpose of the RAN system was to provide an "acoustically clean" flow path within the nacelle to isolate that portion of the total engine system acoustic signature attributed to fan noise. The RAN design accomplished this by removing the stators that provided internal support to the nacelle. In its place, two external struts mounted to a two-axis positioning table located behind the tunnel wall provided the support. Nacelle-mounted lasers and a closed-loop control system provided the input to the table to maintain nacelle to fan concentricity as thermal and thrust loads displaced the strut-mounted fan. This unique design required extensive analysis and verification testing to ensure the safety of the fan model, propulsion simulator drive rig, and facility, along with experimental consistency of acoustic data obtained while using the RAN system. Initial testing was used to optimize the positioning system and resulted in concentricity errors of +/- 0.0031 in. in the horizontal direction and +0.0035/-0.0013 in, in the vertical direction. As a result of successful testing, the RAN system will be transitioned into other acoustic research programs at NASA Glenn Research Center.

Evaluation of the photoprotective effect of β-cyclodextrin on the emission of volatile degradation products of ranitidine.

PubMed

Jamrógiewicz, Marzena; Wielgomas, Bartosz; Strankowski, Michał

2014-09-01

The process of the photo-excitation of ranitidine hydrochloride (RAN) in a solid state makes visible changes to its colour and generates an unpleasant odour. The purpose of the present study was to observe the protective effects of β-cyclodextrin (CD) complexation as well as the effect of the mixture of two stoichiometries 1:1 and 1:2 (RAN:CD, IC) on the photostability of samples in a solid state. Samples of inclusion complexes (IC) and physical mixtures (PM) were prepared and irradiated for 48h in a Suntest CPS+ chamber. Irradiated samples were analyzed using nuclear magnetic resonance ((1)H NMR), infrared spectroscopy (FT-IR), the differential scanning calorimetry method (DSC) and thermogravimetry analysis (TGA). Volatiles were monitored with the use of headspace-solid phase microextraction-gas chromatography-mass spectrometry (HS-SPME-GC-MS). The protective effect of CD was noticed with respect to IC, and also PM. Achieved photostabilization of complexed RAN against photodegradation could be explained due to either the inclusion of the furan part of RAN into the CD cavity as shown by the (1)H NMR ROESY (rotation frame nuclear Overhauser effect spectroscopy) spectrum or the screening effect of CD. FT-IR spectra, DSC curves and microscope images of irradiated samples of protected RAN did not indicate any physical changes, such as phase transfer. Copyright © 2014 Elsevier B.V. All rights reserved.

A Novel Quasi-3D Method for Cascade Flow Considering Axial Velocity Density Ratio

NASA Astrophysics Data System (ADS)

Chen, Zhiqiang; Zhou, Ming; Xu, Quanyong; Huang, Xudong

2018-03-01

A novel quasi-3D Computational Fluid Dynamics (CFD) method of mid-span flow simulation for compressor cascades is proposed. Two dimension (2D) Reynolds-Averaged Navier-Stokes (RANS) method is shown facing challenge in predicting mid-span flow with a unity Axial Velocity Density Ratio (AVDR). Three dimension (3D) RANS solution also shows distinct discrepancies if the AVDR is not predicted correctly. In this paper, 2D and 3D CFD results discrepancies are analyzed and a novel quasi-3D CFD method is proposed. The new quasi-3D model is derived by reducing 3D RANS Finite Volume Method (FVM) discretization over a one-spanwise-layer structured mesh cell. The sidewall effect is considered by two parts. The first part is explicit interface fluxes of mass, momentum and energy as well as turbulence. The second part is a cell boundary scaling factor representing sidewall boundary layer contraction. The performance of the novel quasi-3D method is validated on mid-span pressure distribution, pressure loss and shock prediction of two typical cascades. The results show good agreement with the experiment data on cascade SJ301-20 and cascade AC6-10 at all test condition. The proposed quasi-3D method shows superior accuracy over traditional 2D RANS method and 3D RANS method in performance prediction of compressor cascade.

3-D Wave-Structure Interaction with Coastal Sediments - A Multi-Physics/Multi-Solution Techniques Approach

DTIC Science & Technology

2007-01-01

Stokes (RANS) and the particle finite element method ( PFEM ) will be used in the water/mine/sand domain. Sand and the geomaterials around the sand will...wave propagation over a bottom mine at various time steps (Soil and Foam model) 8 SOLID/FEM SAND/SPH GEOMATERIALS FNPF/BEM FNPF/BEM RANS/ PFEM

Rapid Naming in Relation to Reading and Writing in Korean (Hangul), Chinese (Hanja) and English among Korean Children: A 1-Year Longitudinal Study

ERIC Educational Resources Information Center

Cho, Jeung-Ryeul; Chiu, Ming Ming

2015-01-01

The relation of rapid automatised naming (RAN) to word recognition may depend on the phonological regularity of the orthography. This study examined differential contributions of RAN to reading and writing in Korean alphabetic Hangul, logographic Hanja (Chinese) and English as a second language among 73 fifth graders in Korea across 1?year. RAN…

Elucidating the Component Processes Involved in Dyslexic and Non-Dyslexic Reading Fluency: An Eye-Tracking Study

ERIC Educational Resources Information Center

Jones, Manon W.; Obregon, Mateo; Kelly, M. Louise; Branigan, Holly P.

2008-01-01

The relationship between rapid automatized naming (RAN) and reading fluency is well documented (see Wolf, M. & Bowers, P.G. (1999). "The double-deficit hypothesis for the 'developmental dyslexias.'" "Journal of Educational Psychology," 91(3), 415-438, for a review), but little is known about which component processes are important in RAN, and why…