variable-temperature variable-field mcd: Topics by Science.gov

Sample records for variable-temperature variable-field mcd

CD, MCD and VTVH MCD Studies of Biferrous and Mixed-Valent myo-Inositol Oxygenase: Insights into Substrate Activation of O2 Reactivity

PubMed Central

Snyder, Rae Ana; Bell, Caleb B.; Diao, Yinghui; Krebs, Carsten; Bollinger, J. Martin; Solomon, Edward I.

2013-01-01

Myo-inositol oxygenase (MIOX) catalyzes the 4e− oxidation of myo-inositol (MI) to D-glucuronate using a substrate activated Fe(II)Fe(III) site. The biferrous and Fe(II)Fe(III) forms of MIOX were studied with circular dichroism (CD), magnetic circular dichroism (MCD), and variable temperature variable field (VTVH) MCD spectroscopies. The MCD spectrum of biferrous MIOX shows two ligand field (LF) transitions near 10,000 cm−1, split by ~2,000 cm−1, characteristic of 6 coordinate (6C) Fe(II) sites, indicating that the modest reactivity of the biferrous form toward O2 can be attributed to the saturated coordination of both irons. Upon oxidation to the Fe(II)Fe(III) state, MIOX shows two LF transitions in the ~10,000 cm−1 region, again implying a coordinatively saturated Fe(II) site. Upon MI binding, these split in energy to 5,200 cm−1 and 11,200 cm−1, showing that MI binding causes the Fe(II) to become coordinately unsaturated. VTVH MCD magnetization curves of unbound and MI-bound Fe(II)Fe(III) forms show that upon substrate binding, the isotherms become more nested, requiring that the exchange coupling and ferrous zero field splitting (ZFS) both decrease in magnitude. These results imply that MI binds to the ferric site, weakening the Fe(III)-μ-OH bond and strengthening the Fe(II)-μ-OH bond. This perturbation results in the release of a coordinated water from the Fe(II) that enables its O2 activation. PMID:24066857
The Mars Climate Database (MCD version 5.2)

NASA Astrophysics Data System (ADS)

Millour, E.; Forget, F.; Spiga, A.; Navarro, T.; Madeleine, J.-B.; Montabone, L.; Pottier, A.; Lefevre, F.; Montmessin, F.; Chaufray, J.-Y.; Lopez-Valverde, M. A.; Gonzalez-Galindo, F.; Lewis, S. R.; Read, P. L.; Huot, J.-P.; Desjean, M.-C.; MCD/GCM development Team

2015-10-01

The Mars Climate Database (MCD) is a database of meteorological fields derived from General Circulation Model (GCM) numerical simulations of the Martian atmosphere and validated using available observational data. The MCD includes complementary post-processing schemes such as high spatial resolution interpolation of environmental data and means of reconstructing the variability thereof. We have just completed (March 2015) the generation of a new version of the MCD, MCD version 5.2
Study of gravity waves propagation in the thermosphere of Mars based on MAVEN/NGIMS density measurements

NASA Astrophysics Data System (ADS)

Vals, M.

2017-09-01

We use MAVEN/NGIMS CO2 density measurements to analyse gravity waves in the thermosphere of Mars. In particular the seasonal/latitudinal variability of their amplitude is studied and interpreted. Key background parameters controlling the activity of gravity waves are analysed with the help of the Mars Climate Database (MCD). Gravity waves activity presents a good anti-correlation to the temperature variability retrieved from the MCD. An analysis at pressure levels is ongoing.
Spectroscopic definition of the biferrous and biferric sites in de novo designed four-helix bundle DFsc peptides: implications for O2 reactivity of binuclear non-heme iron enzymes.

PubMed

Bell, Caleb B; Calhoun, Jennifer R; Bobyr, Elena; Wei, Pin-Pin; Hedman, Britt; Hodgson, Keith O; Degrado, William F; Solomon, Edward I

2009-01-13

DFsc is a single chain de novo designed four-helix bundle peptide that mimics the core protein fold and primary ligand set of various binuclear non-heme iron enzymes. DFsc and the E11D, Y51L, and Y18F single amino acid variants have been studied using a combination of near-IR circular dichroism (CD), magnetic circular dichroism (MCD), variable temperature variable field MCD (VTVH MCD), and X-ray absorption (XAS) spectroscopies. The biferrous sites are all weakly antiferromagnetically coupled with mu-1,3 carboxylate bridges and one 4-coordinate and one 5-coordinate Fe, very similar to the active site of class I ribonucleotide reductase (R2) providing open coordination positions on both irons for dioxygen to bridge. From perturbations of the MCD and VTVH MCD the iron proximal to Y51 can be assigned as the 4-coordinate center, and XAS results show that Y51 is not bound to this iron in the reduced state. The two open coordination positions on one iron in the biferrous state would become occupied by dioxygen and Y51 along the O(2) reaction coordinate. Subsequent binding of Y51 functions as an internal spectral probe of the O(2) reaction and as a proton source that would promote loss of H(2)O(2). Coordination by a ligand that functions as a proton source could be a structural mechanism used by natural binuclear iron enzymes to drive their reactions past peroxo biferric level intermediates.
Spectroscopic definition of the biferrous and biferric sites of de novo designed 4-helix bundle DFsc peptides: Implications for O2 reactivity of binuclear non-heme iron enzymes

PubMed Central

Bell, Caleb B.; Calhoun, Jennifer R.; Bobyr, Elena; Wei, Pin-pin; Hedman, Britt; Hodgson, Keith O.; DeGrado, William F.; Solomon, Edward I.

2009-01-01

DFsc is a single chain de novo designed 4-helix bundle peptide that mimics the core protein fold and primary ligand set of various binuclear non-heme iron enzymes. DFsc and the E11D, Y51L and Y18F single amino acid variants have been studied using a combination of near-IR circular dichroism (CD), magnetic circular dichroism (MCD), variable temperature variable field MCD (VTVH MCD) and x-ray absorption (XAS) spectroscopies. The biferrous sites are all weakly antiferromagnetically coupled with μ-1,3 carboxylate bridges and one 4-coordinate and one 5-coordinate Fe, very similar to the active site of Class I ribonucleotide reductase (R2) providing open coordination positions on both irons for dioxygen to bridge. From perturbations of the MCD and VTVH MCD the iron proximal to Y51 can be assigned as the 4-coordinate center and XAS results show that Y51 is not bound to this iron in the reduced state. The two open coordination positions on one iron in the biferrous state would become occupied by dioxygen and Y51 along the O2 reaction coordinate. Subsequent binding of Y51 functions as an internal spectral probe of the O2 reaction and as a proton source that would promote loss of H2O2. Coordination by a ligand that functions as a proton source could be a structural mechanism used by natural binuclear iron enzymes to drive their reactions past peroxo biferric level intermediates. PMID:19090676
CD/MCD/VTVH-MCD Studies of Escherichia coli Bacterioferritin Support a Binuclear Iron Cofactor Site.

PubMed

Kwak, Yeonju; Schwartz, Jennifer K; Huang, Victor W; Boice, Emily; Kurtz, Donald M; Solomon, Edward I

2015-12-01

Ferritins and bacterioferritins (Bfrs) utilize a binuclear non-heme iron binding site to catalyze oxidation of Fe(II), leading to formation of an iron mineral core within a protein shell. Unlike ferritins, in which the diiron site binds Fe(II) as a substrate, which then autoxidizes and migrates to the mineral core, the diiron site in Bfr has a 2-His/4-carboxylate ligand set that is commonly found in diiron cofactor enzymes. Bfrs could, therefore, utilize the diiron site as a cofactor rather than for substrate iron binding. In this study, we applied circular dichroism (CD), magnetic CD (MCD), and variable-temperature, variable-field MCD (VTVH-MCD) spectroscopies to define the geometric and electronic structures of the biferrous active site in Escherichia coli Bfr. For these studies, we used an engineered M52L variant, which is known to eliminate binding of a heme cofactor but to have very minor effects on either iron oxidation or mineral core formation. We also examined an H46A/D50A/M52L Bfr variant, which additionally disrupts a previously observed mononuclear non-heme iron binding site inside the protein shell. The spectral analyses define a binuclear and an additional mononuclear ferrous site. The biferrous site shows two different five-coordinate centers. After O2 oxidation and re-reduction, only the mononuclear ferrous signal is eliminated. The retention of the biferrous but not the mononuclear ferrous site upon O2 cycling supports a mechanism in which the binuclear site acts as a cofactor for the O2 reaction, while the mononuclear site binds the substrate Fe(II) that, after its oxidation to Fe(III), migrates to the mineral core.
Molecular-Level Insight into the Differential Oxidase and Oxygenase Reactivities of de Novo Due Ferri Proteins

DOE PAGES

Snyder, Rae Ana; Butch, Susan E.; Reig, Amanda J.; ...

2015-06-19

Using the single-chain due ferri (DFsc) peptide scaffold, the differential oxidase and oxygenase reactivities of two 4A → 4G variants, one with two histidines at the diiron center (G4DFsc) and the other with three histidines (3His-G4DFsc(Mut3)), are explored. By controlling the reaction conditions, the active form responsible for 4-aminophenol (4-AP) oxidase activity in both G4DFsc and 3His-G4DFsc(Mut3) is determined to be the substrate-bound biferrous site. Using circular dichroism (CD), magnetic CD (MCD), and variable-temperature, variable-field (VTVH) MCD spectroscopies, 4-AP is found to bind directly to the biferrous sites of the DF proteins. In G4DFsc, 4-AP increases the coordination of themore » biferrous site, while in 3His-G4DFsc(Mut3), the coordination number remains the same and the substrate likely replaces the additional bound histidine. This substrate binding enables a two-electron process where 4-AP is oxidized to benzoquinone imine and O 2 is reduced to H 2O 2. In contrast, only the biferrous 3His variant is found to be active in the oxygenation of p-anisidine to 4-nitroso-methoxybenzene. From CD, MCD, and VTVH MCD, p-anisidine addition is found to minimally perturb the biferrous centers of both G4DFsc and 3His-G4DFsc(Mut3), indicating that this substrate binds near the biferrous site. Lastly, in 3His-G4DFsc(Mut3), the coordinative saturation of one iron leads to the two-electron reduction of O 2 at the second iron to generate an end-on hydroperoxo-Fe(III) active oxygenating species.« less
Near-IR MCD of the nonheme ferrous active site in naphthalene 1,2-dioxygenase: correlation to crystallography and structural insight into the mechanism of Rieske dioxygenases.

PubMed

Ohta, Takehiro; Chakrabarty, Sarmistha; Lipscomb, John D; Solomon, Edward I

2008-02-06

Near-IR MCD and variable temperature, variable field (VTVH) MCD have been applied to naphthalene 1,2-dioxygenase (NDO) to describe the coordination geometry and electronic structure of the mononuclear nonheme ferrous catalytic site in the resting and substrate-bound forms with the Rieske 2Fe2S cluster oxidized and reduced. The structural results are correlated with the crystallographic studies of NDO and other related Rieske nonheme iron oxygenases to develop molecular level insights into the structure/function correlation for this class of enzymes. The MCD data for resting NDO with the Rieske center oxidized indicate the presence of a six-coordinate high-spin ferrous site with a weak axial ligand which becomes more tightly coordinated when the Rieske center is reduced. Binding of naphthalene to resting NDO (Rieske oxidized and reduced) converts the six-coordinate sites into five-coordinate (5c) sites with elimination of a water ligand. In the Rieske oxidized form the 5c sites are square pyramidal but transform to a 1:2 mixture of trigonal bipyramial/square pyramidal sites when the Rieske center is reduced. Thus the geometric and electronic structure of the catalytic site in the presence of substrate can be significantly affected by the redox state of the Rieske center. The catalytic ferrous site is primed for the O2 reaction when substrate is bound in the active site in the presence of the reduced Rieske site. These structural changes ensure that two electrons and the substrate are present before the binding and activation of O2, which avoids the uncontrolled formation and release of reactive oxygen species.
The nature of the exchange coupling between high-spin Fe(III) heme o3 and CuBII in Escherichia coli quinol oxidase, cytochrome bo3: MCD and EPR studies.

PubMed

Cheesman, Myles R; Oganesyan, Vasily S; Watmough, Nicholas J; Butler, Clive S; Thomson, Andrew J

2004-04-07

Fully oxidized cytochrome bo3 from Escherichia coli has been studied in its oxidized and several ligand-bound forms using electron paramagnetic resonance (EPR) and magnetic circular dichroism (MCD) spectroscopies. In each form, the spin-coupled high-spin Fe(III) heme o3 and CuB(II) ion at the active site give rise to similar fast-relaxing broad features in the dual-mode X-band EPR spectra. Simulations of dual-mode spectra are presented which show that this EPR can arise only from a dinuclear site in which the metal ions are weakly coupled by an anisotropic exchange interaction of J 1 cm-1. A variable-temperature and magnetic field (VTVF) MCD study is also presented for the cytochrome bo3 fluoride and azide derivatives. New methods are used to extract the contribution to the MCD of the spin-coupled active site in the presence of strong transitions from low-spin Fe(III) heme b. Analysis of the MCD data, independent of the EPR study, also shows that the spin-coupling within the active site is weak with J approximately 1 cm-1. These conclusions overturn a long-held view that such EPR signals in bovine cytochrome c oxidase arise from an S' = 2 ground state resulting from strong exchange coupling (J > 10(2) cm-1) within the active site.
Magneto-Structural Correlations in Pseudotetrahedral Forms of the [Co(SPh)4]2- Complex Probed by Magnetometry, MCD Spectroscopy, Advanced EPR Techniques, and ab Initio Electronic Structure Calculations.

PubMed

Suturina, Elizaveta A; Nehrkorn, Joscha; Zadrozny, Joseph M; Liu, Junjie; Atanasov, Mihail; Weyhermüller, Thomas; Maganas, Dimitrios; Hill, Stephen; Schnegg, Alexander; Bill, Eckhard; Long, Jeffrey R; Neese, Frank

2017-03-06

The magnetic properties of pseudotetrahedral Co(II) complexes spawned intense interest after (PPh 4 ) 2 [Co(SPh) 4 ] was shown to be the first mononuclear transition-metal complex displaying slow relaxation of the magnetization in the absence of a direct current magnetic field. However, there are differing reports on its fundamental magnetic spin Hamiltonian (SH) parameters, which arise from inherent experimental challenges in detecting large zero-field splittings. There are also remarkable changes in the SH parameters of [Co(SPh) 4 ] 2- upon structural variations, depending on the counterion and crystallization conditions. In this work, four complementary experimental techniques are utilized to unambiguously determine the SH parameters for two different salts of [Co(SPh) 4 ] 2- : (PPh 4 ) 2 [Co(SPh) 4 ] (1) and (NEt 4 ) 2 [Co(SPh) 4 ] (2). The characterization methods employed include multifield SQUID magnetometry, high-field/high-frequency electron paramagnetic resonance (HF-EPR), variable-field variable-temperature magnetic circular dichroism (VTVH-MCD), and frequency domain Fourier transform THz-EPR (FD-FT THz-EPR). Notably, the paramagnetic Co(II) complex [Co(SPh) 4 ] 2- shows strong axial magnetic anisotropy in 1, with D = -55(1) cm -1 and E/D = 0.00(3), but rhombic anisotropy is seen for 2, with D = +11(1) cm -1 and E/D = 0.18(3). Multireference ab initio CASSCF/NEVPT2 calculations enable interpretation of the remarkable variation of D and its dependence on the electronic structure and geometry.
Visible region MCD and MLD spectra of nitrosylferrohemoglobin and oxyhemoglobin.

PubMed

Pearce, Linda L; Bominaar, Emile L; Peterson, Jim

2002-09-20

Magnetic circular dichroism (MCD) and magnetic linear dichroism (MLD) spectroscopies at various applied magnetic fields (0-6T) and temperatures (2.0-31K) have been used to investigate the electronic properties of the visible (Q(0-0), or alpha band) region of oxy- and nitrosylferrohemoglobin (HbNO). OxyHb, a d(6) (S=0) diamagnet, exhibits the expected pseudo-first derivative MCD and pseudo-second derivative MLD temperature-independent features centered at 574nm. HbNO, a d(7) (S=1/2) paramagnet, also exhibits a temperature-independent pseudo-first derivative MCD spectrum, but centered at 571nm. So far as we are aware, this behavior is unprecedented in the MCD spectra of paramagetic iron-porphyrins, which are expected to be dominated by temperature-dependent C(0) terms. The HbNO MCD spectrum does, however, demonstrate limited field-dependent saturation magnetization behavior and the MLD spectrum is currently below the detection limit. In addition, an MCD signal from reoxygenated venous blood is reported and compared with MCD signals from oxy- and HbNO derivatives. Finally, a combination of MCD and MLD spectroscopies has been used to estimate the orbital angular momentum (M(L)) value of the alpha band excited state of oxyHb as 4.2 (+/-0.7).
VTVH-MCD and DFT studies of thiolate bonding to [FeNO]7/[FeO2]8 complexes of isopenicillin N synthase: substrate determination of oxidase versus oxygenase activity in nonheme Fe enzymes.

PubMed

Brown, Christina D; Neidig, Michael L; Neibergall, Matthew B; Lipscomb, John D; Solomon, Edward I

2007-06-13

Isopenicillin N synthase (IPNS) is a unique mononuclear nonheme Fe enzyme that catalyzes the four-electron oxidative double ring closure of its substrate ACV. A combination of spectroscopic techniques including EPR, absorbance, circular dichroism (CD), magnetic CD, and variable-temperature, variable-field MCD (VTVH-MCD) were used to evaluate the geometric and electronic structure of the [FeNO]7 complex of IPNS coordinated with the ACV thiolate ligand. Density Function Theory (DFT) calculations correlated to the spectroscopic data were used to generate an experimentally calibrated bonding description of the Fe-IPNS-ACV-NO complex. New spectroscopic features introduced by the binding of the ACV thiolate at 13 100 and 19 800 cm-1 are assigned as the NO pi*(ip) --> Fe dx2-y2 and S pi--> Fe dx2-y2 charge transfer (CT) transitions, respectively. Configuration interaction mixes S CT character into the NO pi*(ip) --> Fe dx2-y2 CT transition, which is observed experimentally from the VTVH-MCD data from this transition. Calculations on the hypothetical {FeO2}8 complex of Fe-IPNS-ACV reveal that the configuration interaction present in the [FeNO]7 complex results in an unoccupied frontier molecular orbital (FMO) with correct orientation and distal O character for H-atom abstraction from the ACV substrate. The energetics of NO/O2 binding to Fe-IPNS-ACV were evaluated and demonstrate that charge donation from the ACV thiolate ligand renders the formation of the FeIII-superoxide complex energetically favorable, driving the reaction at the Fe center. This single center reaction allows IPNS to avoid the O2 bridged binding generally invoked in other nonheme Fe enzymes that leads to oxygen insertion (i.e., oxygenase function) and determines the oxidase activity of IPNS.
CD and MCD spectroscopic studies of the two Dps miniferritin proteins from Bacillus anthracis: role of O2 and H2O2 substrates in reactivity of the diiron catalytic centers.

PubMed

Schwartz, Jennifer K; Liu, Xiaofeng S; Tosha, Takehiko; Diebold, Adrienne; Theil, Elizabeth C; Solomon, Edward I

2010-12-14

DNA protection during starvation (Dps) proteins are miniferritins found in bacteria and archaea that provide protection from uncontrolled Fe(II)/O radical chemistry; thus the catalytic sites are targets for antibiotics against pathogens, such as anthrax. Ferritin protein cages synthesize ferric oxymineral from Fe(II) and O(2)/H(2)O(2), which accumulates in the large central cavity; for Dps, H(2)O(2) is the more common Fe(II) oxidant contrasting with eukaryotic maxiferritins that often prefer dioxygen. To better understand the differences in the catalytic sites of maxi- versus miniferritins, we used a combination of NIR circular dichroism (CD), magnetic circular dichroism (MCD), and variable-temperature, variable-field MCD (VTVH MCD) to study Fe(II) binding to the catalytic sites of the two Bacillus anthracis miniferritins: one in which two Fe(II) react with O(2) exclusively (Dps1) and a second in which both O(2) or H(2)O(2) can react with two Fe(II) (Dps2). Both result in the formation of iron oxybiomineral. The data show a single 5- or 6-coordinate Fe(II) in the absence of oxidant; Fe(II) binding to Dps2 is 30× more stable than Dps1; and the lower limit of K(D) for binding a second Fe(II), in the absence of oxidant, is 2-3 orders of magnitude weaker than for the binding of the single Fe(II). The data fit an equilibrium model where binding of oxidant facilitates formation of the catalytic site, in sharp contrast to eukaryotic M-ferritins where the binuclear Fe(II) centers are preformed before binding of O(2). The two different binding sequences illustrate the mechanistic range possible for catalytic sites of the family of ferritins.
Reaction landscape of a pentadentate N5-ligated Mn(II) complex with O2˙- and H2O2 includes conversion of a peroxomanganese(III) adduct to a bis(μ-oxo)dimanganese(III,IV) species.

PubMed

Leto, Domenick F; Chattopadhyay, Swarup; Day, Victor W; Jackson, Timothy A

2013-09-28

Herein we describe the chemical reactivity of the mononuclear [Mn(II)(N4py)(OTf)](OTf) (1) complex with hydrogen peroxide and superoxide. Treatment of 1 with one equivalent superoxide at -40 °C in MeCN formed the peroxomanganese(III) adduct, [Mn(III)(O2)(N4py)](+) (2) in ~30% yield. Complex 2 decayed over time and the formation of the bis(μ-oxo)dimanganese(III,IV) complex, [Mn(III)Mn(IV)(μ-O)2(N4py)2](3+) (3) was observed. When 2 was formed in higher yields (~60%) using excess superoxide, the [Mn(III)(O2)(N4py)](+) species thermally decayed to Mn(II) species and 3 was formed in no greater than 10% yield. Treatment of [Mn(III)(O2)(N4py)](+) with 1 resulted in the formation of 3 in ~90% yield, relative to the concentration of [Mn(III)(O2)(N4py)](+). This reaction mimics the observed chemistry of Mn-ribonucleotide reductase, as it features the conversion of two Mn(II) species to an oxo-bridged Mn(III)Mn(IV) compound using O2(-) as oxidant. Complex 3 was independently prepared through treatment of 1 with H2O2 and base at -40 °C. The geometric and electronic structures of 3 were probed using electronic absorption, electron paramagnetic resonance (EPR), magnetic circular dichroism (MCD), variable-temperature, variable-field MCD (VTVH-MCD), and X-ray absorption (XAS) spectroscopies. Complex 3 was structurally characterized by X-ray diffraction (XRD), which revealed the N4py ligand bound in an unusual tetradentate fashion.
Valley Zeeman splitting of monolayer MoS2 probed by low-field magnetic circular dichroism spectroscopy at room temperature

NASA Astrophysics Data System (ADS)

Wu, Y. J.; Shen, C.; Tan, Q. H.; Shi, J.; Liu, X. F.; Wu, Z. H.; Zhang, J.; Tan, P. H.; Zheng, H. Z.

2018-04-01

The valley Zeeman splitting of monolayer two-dimensional (2D) materials in the magnetic field plays an important role in the valley and spin manipulations. In general, a high magnetic field (6-65 T) and low temperature (2-30 K) were two key measurement conditions to observe the resolvable valley Zeeman splitting of monolayer 2D materials in current reported experiments. In this study, we experimentally demonstrate an effective measurement scheme by employing magnetic circular dichroism (MCD) spectroscopy, which enables us to distinguish the valley Zeeman splitting under a relatively low magnetic field of 1 T at room temperature. MCD peaks related to both A and B excitonic transitions in monolayer MoS2 can be clearly observed. Based on the MCD spectra under different magnetic fields (-3 to 3 T), we obtained the valley Zeeman splitting energy and the g-factors of A and B excitons, respectively. Our results show that MCD spectroscopy is a high-sensitive magneto-optical technique to explore the valley and spin manipulation in 2D materials.
Magnetic nanoparticles formed in glasses co-doped with iron and larger radius elements

NASA Astrophysics Data System (ADS)

Edelman, I.; Ivanova, O.; Ivantsov, R.; Velikanov, D.; Zabluda, V.; Zubavichus, Y.; Veligzhanin, A.; Zaikovskiy, V.; Stepanov, S.; Artemenko, A.; Curély, J.; Kliava, J.

2012-10-01

A new type of nanoparticle-containing glasses based on borate glasses co-doped with low contents of iron and larger radius elements, Dy, Tb, Gd, Ho, Er, Y, and Bi, is studied. Heat treatment of these glasses results in formation of magnetic nanoparticles, radically changing their physical properties. Transmission electron microscopy and synchrotron radiation-based techniques: x-ray diffraction, extended x-ray absorption fine structure, x-ray absorption near-edge structure, and small-angle x-ray scattering, show a broad distribution of nanoparticle sizes with characteristics depending on the treatment regime; a crystalline structure of these nanoparticles is detected in heat treated samples. Magnetic circular dichroism (MCD) studies of samples subjected to heat treatment as well as of maghemite, magnetite, and iron garnet allow to unambiguously assign the nanoparticle structure to maghemite, independently of co-dopant nature and of heat treatment regime used. Different features observed in the MCD spectra are related to different electron transitions in Fe3+ ions gathered in the nanoparticles. The static magnetization in heat treated samples has non-linear dependence on the magnetizing field with hysteresis. Zero-field cooled magnetization curves show that at higher temperatures the nanoparticles occur in superparamagnetic state with blocking temperatures above 100 K. Below ca. 20 K, a considerable contribution to both zero field-cooled and field-cooled magnetizations occurs from diluted paramagnetic ions. Variable-temperature electron magnetic resonance (EMR) studies unambiguously show that in as-prepared glasses paramagnetic ions are in diluted state and confirm the formation of magnetic nanoparticles already at earlier stages of heat treatment. Computer simulations of the EMR spectra corroborate the broad distribution of nanoparticle sizes found by "direct" techniques as well as superparamagnetic nanoparticle behaviour demonstrated in the magnetization studies.
The Mars Climate Database (MCD version 5.3)

NASA Astrophysics Data System (ADS)

Millour, Ehouarn; Forget, Francois; Spiga, Aymeric; Vals, Margaux; Zakharov, Vladimir; Navarro, Thomas; Montabone, Luca; Lefevre, Franck; Montmessin, Franck; Chaufray, Jean-Yves; Lopez-Valverde, Miguel; Gonzalez-Galindo, Francisco; Lewis, Stephen; Read, Peter; Desjean, Marie-Christine; MCD/GCM Development Team

2017-04-01

Our Global Circulation Model (GCM) simulates the atmospheric environment of Mars. It is developped at LMD (Laboratoire de Meteorologie Dynamique, Paris, France) in close collaboration with several teams in Europe (LATMOS, France, University of Oxford, The Open University, the Instituto de Astrofisica de Andalucia), and with the support of ESA (European Space Agency) and CNES (French Space Agency). GCM outputs are compiled to build a Mars Climate Database, a freely available tool useful for the scientific and engineering communities. The Mars Climate Database (MCD) has over the years been distributed to more than 300 teams around the world. The latest series of reference simulations have been compiled in a new version (v5.3) of the MCD, released in the first half of 2017. To summarize, MCD v5.3 provides: - Climatologies over a series of synthetic dust scenarios: standard (climatology) year, cold (ie: low dust), warm (ie: dusty atmosphere) and dust storm, all topped by various cases of Extreme UV solar inputs (low, mean or maximum). These scenarios have been derived from home-made, instrument-derived (TES, THEMIS, MCS, MERs), dust climatology of the last 8 Martian years. The MCD also provides simulation outputs (MY24-31) representative of these actual years. - Mean values and statistics of main meteorological variables (atmospheric temperature, density, pressure and winds), as well as surface pressure and temperature, CO2 ice cover, thermal and solar radiative fluxes, dust column opacity and mixing ratio, [H20] vapor and ice columns, concentrations of many species: [CO], [O2], [O], [N2], [H2], [O3], ... - A high resolution mode which combines high resolution (32 pixel/degree) MOLA topography records and Viking Lander 1 pressure records with raw lower resolution GCM results to yield, within the restriction of the procedure, high resolution values of atmospheric variables. - The possibility to reconstruct realistic conditions by combining the provided climatology with additional large scale and small scale perturbations schemes. At EGU, we will report on the latest improvements in the Mars Climate Database, with comparisons with available measurements from orbit (e.g.: TES, MCS) and landers (Viking, Phoenix, MSL).
Spectroscopic and Redox Studies of Valence-Delocalized [Fe2S2]+ Centers in Thioredoxin-Like Ferredoxins

PubMed Central

Subramanian, Sowmya; Duin, Evert C.; Fawcett, Sarah E. J.; Armstrong, Fraser A.; Meyer, Jacques; Johnson, Michael K.

2015-01-01

Reduced forms of the C56S and C60S variants of the thioredoxin-like Clostridium pasteurianum [Fe2S2] ferredoxin (CpFd) provide the only known examples of valence-delocalized [Fe2S2]+ clusters, which constitute a fundamental building block of all higher nuclearity Fe-S clusters. In this work, we have revisited earlier work on the CpFd variants and carried out redox and spectroscopic studies on the [Fe2S2]2+,+ centers in wild-type and equivalent variants of the highly homologous and structurally characterized Aquifex aeolicus ferredoxin 4 (AaeFd4) using EPR, UV-visible-NIR absorption, CD and variable-temperature MCD, and protein-film electrochemistry. The results indicate that the [Fe2S2]+ centers in the equivalent AaeFd4 and CpFd variants reversibly interconvert between similar valence-localized S = 1/2 and valence-delocalized S = 9/2 forms as a function of pH, with pKa values in the range 8.3-9.0, due to protonation of the coordinated serinate residue. However, freezing high-pH samples results in partial or full conversion from valence-delocalized S = 9/2 to valence-localized S = 1/2 [Fe2S2]+ clusters. MCD saturation magnetization data for valence-delocalized S = 9/2 [Fe2S2]+ centers facilitated determination of transition polarizations and thereby assignments of low-energy MCD bands associated with the Fe−Fe interaction. The assignments provide experimental assessment of the double exchange parameter, B, for valence-delocalized [Fe2S2]+ centers and demonstrate that variable-temperature MCD spectroscopy provides a means of detecting and investigating the properties of valence-delocalized S = 9/2 [Fe2S2]+ fragments in higher nuclearity Fe-S clusters. The origin of valence delocalization in thioredoxin-like ferredoxin Cys-to-Ser variants and Fe-S clusters in general is discussed in light of these results. PMID:25790339
Late Miocene to Pleistocene Mineralogy of ODP Site 1146

NASA Astrophysics Data System (ADS)

Arnold, E. M.

2001-12-01

ODP Site 1146 (19° 27.40'N, 116° 16.37'E, 2092 m depth) was drilled on the continental slope of the South China Sea. A composite section, comprised of three stratigraphic units, extends down to 640 mcd. Unit 1 is late Pliocene to Pleistocene nannofossil clay (0 - 243 mcd); Unit 2, middle Miocene to Late Pliocene foraminifera - nannofossil - clay mixed sediment (243 - 553 mcd); Unit 3, early to middle Miocene nannofossil clay (553 - 642 mcd). This study reports the < 2 μ m mineralogy from the late Miocene through early Pleistocene. Samples were analyzed at approximately 1.5 m intervals from 150 to 225 mcd, and 1 m intervals from 225 to 440 mcd, with an age resolution of ~25 ka and ~35 ka, respectively. Illite, chlorite, quartz and plagioclase concentrations decrease with increasing depth through Unit 1. Kaolinite and calcite concentrations increase with depth, while smectite values are constant in this unit. Illite, quartz and plagioclase show high variability in Unit 1 compared with the underlying Unit 2. Unit 2 has more uniform sediment composition, with constant illite, chlorite, and quartz concentrations. Kaolinite concentration increases with depth, following a drop in concentration across the Unit 1/2 boundary. Plagioclase concentration shows a small, steady decrease throughout this unit. Smectite concentration does not change across the Unit 1/2 boundary, decreases to a steady low value from 310 - 400 mcd, and increases again towards the bottom. The mineralogy of sediments recovered at Site 1146 suggest a classic pattern of source region aridification from the middle Pliocene through the Pleistocene, indicated in Unit 1 mineralogy as a decrease in kaolinite with decreasing depth, concomitant with an increase in quartz, plagioclase, illite and chlorite. The mineral variability in this interval suggests glacial - interglacial control of the terrigenous sedimentation. The sediment sources and source area weathering regimes were relatively constant throughout Unit 2, as indicated by low mineral variability and relatively constant mineral concentrations.
Corneal endothelial cell density and morphology in normal Filipino eyes.

PubMed

Padilla, Ma Dominga B; Sibayan, Santiago Antonio B; Gonzales, Clarissa S A

2004-03-01

To describe the corneal endothelial cell density and morphology in normal adult Filipino eyes. Specular microscopy was performed in 640 eyes of 320 normal Filipino volunteers aged 20 to 86 years. Of these, 163 were male, and 157 were female. Mean cell density (MCD), mean cell area (MCA), coefficient of variation (CV) in cell size (polymegathism), and hexagonality were recorded and analyzed in relation to fellow eyes, gender, and age. MCD was 2798 +/- 307.2 cells/mm, and MCA was 363.0 +/- 40.3 microm. Results showed that women had a MCD 7.8% greater than men (P < 0.01). Regression analysis showed a consistent decrease in MCD (r = -0.47) and increase in MCA (r = 0.45) from 20 to 60 years of age. This was followed by a marked decrease in correlation and apparent trend reversal for both variables in the groups above 60 years (MCD r = 0.18, MCA r = -0.04) accompanied by a marked increase in CV in cell size (20-60 years r = -0.04, >60 years r = 0.33). A very low negative correlation (r = -0.10) was noted between hexagonality and increasing age through all age groups. The first normative data for the endothelium of Filipino eyes are reported. There are statistically significant differences in MCD between genders, and a consistent decrease in MCD and increase in MCA with age only until 60 years old, after which correlation between age and these variables decreases. Polymegathism and correlation between CV in cell size and age markedly increase after age 60.

Hybrid genetic algorithm with an adaptive penalty function for fitting multimodal experimental data: application to exchange-coupled non-Kramers binuclear iron active sites.

PubMed

Beaser, Eric; Schwartz, Jennifer K; Bell, Caleb B; Solomon, Edward I

2011-09-26

A Genetic Algorithm (GA) is a stochastic optimization technique based on the mechanisms of biological evolution. These algorithms have been successfully applied in many fields to solve a variety of complex nonlinear problems. While they have been used with some success in chemical problems such as fitting spectroscopic and kinetic data, many have avoided their use due to the unconstrained nature of the fitting process. In engineering, this problem is now being addressed through incorporation of adaptive penalty functions, but their transfer to other fields has been slow. This study updates the Nanakorrn Adaptive Penalty function theory, expanding its validity beyond maximization problems to minimization as well. The expanded theory, using a hybrid genetic algorithm with an adaptive penalty function, was applied to analyze variable temperature variable field magnetic circular dichroism (VTVH MCD) spectroscopic data collected on exchange coupled Fe(II)Fe(II) enzyme active sites. The data obtained are described by a complex nonlinear multimodal solution space with at least 6 to 13 interdependent variables and are costly to search efficiently. The use of the hybrid GA is shown to improve the probability of detecting the global optimum. It also provides large gains in computational and user efficiency. This method allows a full search of a multimodal solution space, greatly improving the quality and confidence in the final solution obtained, and can be applied to other complex systems such as fitting of other spectroscopic or kinetics data.
Electronic, Magnetic, and Redox Properties of [MFe(3)S(4)] Clusters (M = Cd, Cu, Cr) in Pyrococcus furiosus Ferredoxin.

PubMed

Staples, Christopher R.; Dhawan, Ish K.; Finnegan, Michael G.; Dwinell, Derek A.; Zhou, Zhi Hao; Huang, Heshu; Verhagen, Marc F. J. M.; Adams, Michael W. W.; Johnson, Michael K.

1997-12-03

The ground- and excited-state properties of heterometallic [CuFe(3)S(4)](2+,+), [CdFe(3)S(4)](2+,+), and [CrFe(3)S(4)](2+,+) cubane clusters assembled in Pyrococcus furiosus ferredoxin have been investigated by the combination of EPR and variable-temperature/variable-field magnetic circular dichroism (MCD) studies. The results indicate Cd(2+) incorporation into [Fe(3)S(4)](0,-) cluster fragments to yield S = 2 [CdFe(3)S(4)](2+) and S = (5)/(2) [CdFe(3)S(4)](+) clusters and Cu(+) incorporation into [Fe(3)S(4)](+,0) cluster fragments to yield S = (1)/(2) [CuFe(3)S(4)](2+) and S = 2 [CuFe(3)S(4)](+) clusters. This is the first report of the preparation of cubane type [CrFe(3)S(4)](2+,+) clusters, and the combination of EPR and MCD results indicates S = 0 and S = (3)/(2) ground states for the oxidized and reduced forms, respectively. Midpoint potentials for the [CdFe(3)S(4)](2+,+), [CrFe(3)S(4)](2+,+), and [CuFe(3)S(4)](2+,+) couples, E(m) = -470 +/- 15, -440 +/- 10, and +190 +/- 10 mV (vs NHE), respectively, were determined by EPR-monitored redox titrations or direct electrochemistry at a glassy carbon electrode. The trends in redox potential, ground-state spin, and electron delocalization of [MFe(3)S(4)](2+,+) clusters in P. furiosus ferredoxin are discussed as a function of heterometal (M = Cr, Mn, Fe, Co, Ni, Cu, Zn, Cd, and Tl).
MCD spectroscopy of hexanuclear Mn(III) salicylaldoxime single-molecule magnets.

PubMed

Bradley, Justin M; Thomson, Andrew J; Inglis, Ross; Milios, Constantinos J; Brechin, Euan K; Piligkos, Stergios

2010-11-07

The hexanuclear cages [Mn(6)O(2)(R-sao)(6)L(2)(EtOH)(x)(H(2)O)(y)] "Mn(6)" behave as single-molecule magnets (SMMs) below a characteristic blocking temperature. As with [Mn(12)O(12)(O(2)CR)(16)(H(2)O)(4)] "Mn(12)" the electronic absorption spectra are rather featureless, yielding little information on the electronic structure of the magnetic ions. Low temperature Magnetic Circular Dichroism (MCD) spectra afford greater resolution of the optical transitions and also probe the magnetic properties of the system. Both the ground state spin and blocking temperature of the Mn(6) cages are determined by subtle structural perturbations of a generic Mn(6)O(2) core. Absorbance and MCD spectra are reported for [Mn(6)O(2)(Et-sao)(6){O(2)CPh(Me)(2)}(2)(EtOH)(6)] (1), [Mn(6)O(2)(Et-sao)(6){O(2)CPh}(2)(EtOH)(4)(H(2)O)(2)] (2), [Mn(6)O(2)(sao)(6){O(2)CPh}(2)(EtOH)(4)]·EtOH (3) and the trinuclear precursor [Mn(3)O(Et-sao)(3)(MeOH)(3)](ClO(4)) (4) cast into polymer film. SMM behaviour has previously been observed using magnetic susceptibility measurements on powder and single-crystal samples. The ligand field environment of the magnetic ions is assumed to be similar in (1) and (2) and their different blocking temperatures are attributed to the magnitude of the effective exchange constant. The MCD spectra of (1) and (2), in which the ground state spin S = 12, show that the ligand field environments of the Mn ions are almost identical and that magnetic hysteresis persists for isolated molecules when crystal packing forces are removed. The subtle structural differences between (1) and (2) are manifested in the field dependence of the MCD response at different wavelengths that reflect changes in band polarisation. The MCD spectrum of (3) contains features not apparent in those of (1) and (2). These are attributed to 5-coordinate Mn(iii), which is unique to (3) among the compounds studied. (3) has ground state spin S = 4, a lower blocking temperature and consequently no observable hysteresis in the MCD down to 1.7 K. Comparison of the MCD spectra of (1)-(3) to that of (4) confirms the integrity of the Mn(6)O(2) core when these materials are cast into polymer film.
Electron magnetic resonance and magnetooptical studies of nanoparticle-containing borate glasses

NASA Astrophysics Data System (ADS)

Kliava, Janis; Edelman, Irina; Ivanova, Oxana; Ivantsov, Ruslan; Petrakovskaja, Eleonora; Hennet, Louis; Thiaudière, Dominique; Saboungi, Marie-Louise

2011-03-01

We report electron magnetic resonance (EMR) and magnetooptical studies of borate glasses of molar composition 22.5K 2O-22.5Al 2O 3-55B 2O 3 co-doped with low concentrations of Fe 2O 3 and MnO. In as-prepared samples the paramagnetic ions, as a rule, are in diluted state. However, in the case where the ratio of the iron and manganese oxides in the charge is 3/2, magnetic nanoparticles with characteristics close to those of manganese ferrite are formed already at the first stage of the glass preparation, as evidenced by both magnetic circular dichroism (MCD) and EMR. After thermal treatment all glasses show characteristic MCD and EMR spectra, attesting to the presence of magnetic nanoparticles, predominantly including iron ions. Preliminary EXAFS measurements at the Fe K-absorption edge show an emergence of nanoparticles with a structure close to MnFe 2O 4 after annealing the glasses at 560 °C. By computer simulating the EMR spectra at variable temperatures, a superparamagnetic nature of relatively broad size and shape distribution with the average diameter of ca. 3-4 nm. The characteristic temperature-dependent shift of the apparent resonance field is explained by a strong temperature dependence of the magnetic anisotropy in the nanoparticles. The formation of magnetic nanoparticles confers to the potassium-alumina-borate glasses magnetic and magneto-optical properties typical of magnetically ordered substances. At the same time, they remain transparent in a part of the visible and near infrared spectral range and display a high Faraday rotation value.
Relationship of mast cell density with lymphangiogenesis and prognostic parameters in breast carcinoma.

PubMed

Keser, Sevinc H; Kandemir, Nilufer O; Ece, Dilek; Gecmen, Gonca G; Gul, Aylin E; Barisik, Nagehan O; Sensu, Sibel; Buyukuysal, Cagatay; Barut, Figen

2017-04-01

In many cancers, mast cell density (MCD) in the tumor microenvironment is associated with tumor progression and, to a greater extent, angiogenesis. Our study was designed to investigate the correlation between MCD, tumor lymphangiogenesis, and several well-established prognostic parameters in breast cancer. One hundred and four cases of invasive breast carcinoma diagnosed in our clinic between 2007 and 2011 were included. Mast cells and lymphatic vessels were stained with toluidine blue and D2-40, respectively, and their densities were calculated in various areas of tumors and lymph nodes. The variables of MCD and lymphatic vessel density (LVD) were compared using prognostic parameters as well as with each other. As tumor size and volume increased, MCD increased comparably in metastatic lymph nodes; intratumoral and peritumoral LVD also increased. Lymphovascular invasion, lymphatic invasion, perineural invasion, and estrogen receptor positivity were positively related to intratumoral MCD. The relationship between peritumoral MCD and nontumoral breast tissue MCD was statistically significant. Stage was correlated with MCD in metastatic lymph nodes. Metastatic lymph node MCD and intratumoral MCD were also significantly related. Stage, lymphatic invasion, perineural invasion, lymphovascular invasion, and metastatic lymph node MCD were all correlated with intratumoral and/or peritumoral LVD. As nuclear grade increased, intratumoral LVD became higher. In breast carcinoma, MCD, depending on its location, was related to several prognostic parameters. Notably, mast cells may have at least some effect on lymphangiogenesis, which appears to be a predictor of tumor progression. Copyright © 2017. Published by Elsevier Taiwan.
The Latest Mars Climate Database (MCD v5.1)

NASA Astrophysics Data System (ADS)

Millour, Ehouarn; Forget, Francois; Spiga, Aymeric; Navarro, Thomas; Madeleine, Jean-Baptiste; Pottier, Alizée; Montabone, Luca; Kerber, Laura; Lefèvre, Franck; Montmessin, Franck; Chaufray, Jean-Yves; López-Valverde, Miguel; González-Galindo, Francisco; Lewis, Stephen; Read, Peter; Huot, Jean-Paul; Desjean, Marie-Christine; the MCD/GCM development Team

2014-05-01

For many years, several teams around the world have developed GCMs (General Circulation Model or Global Climate Model) to simulate the environment on Mars. The GCM developed at the Laboratoire de Météorologie Dynamique in collaboration with several teams in Europe (LATMOS, France, University of Oxford, The Open University, the Instituto de Astrofisica de Andalucia), and with the support of ESA and CNES is currently used for many applications. Its outputs have also regularly been compiled to build a Mars Climate Database, a freely available tool useful for the scientific and engineering communities. The Mars Climate Database (MCD) has over the years been distributed to more than 150 teams around the world. Following the recent improvements inthe GCM, a new series of reference simulations have been run and compiled into a new version (version5.1) of the Mars Climate Database, released in the first half of 2014. To summarize, MCD v5.1 provides: - Climatologies over a series of dust scenarios: standard year, cold (ie: low dust), warm (ie: dusty atmosphere) and dust storm, all topped by various cases of Extreme UV solar inputs (low, mean or maximum). These scenarios differ from those of previous versions of the MCD (version 4.x) as they have been derived from home-made, instrument-derived (TES, THEMIS, MCS, MERs), dust climatology of the last 8 Martian years. - Mean values and statistics of main meteorological variables (atmospheric temperature, density, pressure and winds), as well as surface pressure and temperature, CO2 ice cover, thermal and solar radiative fluxes, dust column opacity and mixing ratio, [H20] vapor and ice columns, concentrations of many species: [CO], [O2], [O], [N2], [H2], [O3], ... - A high resolution mode which combines high resolution (32 pixel/degree) MOLA topography records and Viking Lander 1 pressure records with raw lower resolution GCM results to yield, within the restriction of the procedure, high resolution values of atmospheric variables. - The possibility to reconstruct realistic conditions by combining the provided climatology with additional large scale and small scale perturbations schemes. At EGU, we will report on the latest improvements in the Mars Climate Database, with comparisons with available measurements from orbit (e.g.: TES, MCS) or landers (Viking, Phoenix, MSL).
Metastatic Crohn disease clinically reminiscent of erythema nodosum on the right leg.

PubMed

Park, Hyun C; Kim, Hyun W; Park, Chan G; Ko, Joo Y

2016-09-01

Cutaneous manifestations are well-recognized complications of Crohn disease (CD) that can be divided into disease-specific and reactive conditions. One of the most common reactive conditions is erythema nodosum (EN), which presents as subcutaneous tender nodules most often on the legs. On the other hand, metastatic Crohn disease (MCD) is a rare cutaneous manifestation of CD defined as the presence of noncaseating granulomas that are not contiguous with the gastrointestinal (GI) tract. The clinical presentation of MCD is variable; however, lesions often are located on the legs and genital region. We report the case of a 21-year-old woman with a 6-year history of CD who presented with MCD clinically simulating EN.
Immunophenotypic analysis of the Kaposi sarcoma herpesvirus (KSHV; HHV-8)-infected B cells in HIV+ multicentric Castleman disease (MCD).

PubMed

Chadburn, A; Hyjek, E M; Tam, W; Liu, Y; Rengifo, T; Cesarman, E; Knowles, D M

2008-11-01

Kaposi sarcoma herpesvirus (KSHV) is aetiologically related to Kaposi sarcoma, classical and extracavitary primary effusion lymphoma (PEL; EC-PEL) and multicentric Castleman disease (MCD), entities preferentially occurring in HIV-infected individuals. Characterization of HIV-associated PELs/EC-PELs suggests that the KSHV-infected malignant cells originate from a pre-terminal stage of B-cell differentiation. However, only limited phenotypic studies have been performed on HIV+ MCD, including for PR domain containing 1 with zinc finger domain/B lymphocyte-induced maturation protein 1 (PRDM1/BLIMP1), a key regulator of terminal B-cell differentiation. The aim was to characterize KSHV-infected cells in 17 cases of HIV+ MCD. Double immunohistochemistry and immunohistochemistry-in situ hybridization were used to characterize the KSHV-infected cells in MCD; the results were compared with the phenotypic profiles of 39 PELs/EC-PELs and seven PEL cell lines. Whereas the immunophenotype of KSHV-infected cells in MCD and malignant KSHV+ PEL cells was similar (PAX5, Bcl-6-; PRDM1/BLIMP1, IRF4/MUM1+; Ki67+), the MCD KSHV-infected cells differed, as they expressed OCT2, cytoplasmic lambda immunoglobulin; variably expressed CD27; lacked CD138; and were Epstein-Barr virus negative. Although both PEL and MCD originate from KSHV-infected pre-terminally differentiated B cells, these findings, with previously reported genetic studies, indicate HIV+ MCD may arise from extrafollicular B cells, whereas PELs may originate from cells that have traversed the germinal centre.
Malformations of cortical development and epilepsy: evaluation of 101 cases (part II).

PubMed

Güngör, Serdal; Yalnizoğlu, Dilek; Turanli, Güzide; Saatçi, Işil; Erdoğan-Bakar, Emel; Topçu, Meral

2007-01-01

Malformations of cortical development (MCD) form a spectrum of lesions produced by insult to the developing neocortex. Clinical presentation and electrophysiologic findings of MCD are variable and depend on the affected cortical area. We evaluated epilepsy, EEG, and response to antiepileptic treatment in patients with MCD with respect to the neuroimaging findings. We studied 101 patients, ranging between 1 month and 19 years of age. Fifty-four patients were diagnosed with polymicrogyria (PMG), 23 patients with lissencephaly, 12 patients with schizencephaly, and 12 patients with heterotopia. With regards to epilepsy and seizure type, 72/101 (71.3%) patients had epilepsy, and 62/101 (61.4%) patients presented with seizures. Overall, 32.7% of patients had generalized seizures, and 25.7% had complex partial seizures. Mean age at the onset of seizures was 2.7 +/- 3.4 years. The onset of epilepsy tended to be younger in patients with lissencephaly and older in patients with heterotopias. Of the cases, 79.2% had abnormal EEG (56.3% with epileptiform abnormality, 22.9% with non-epileptiform abnormality). EEG was abnormal in 44.9% (13/29) of the cases without epilepsy. EEG showed bilateral synchronous and diffuse epileptiform discharges in 90% of patients with lissencephaly. Patients with schizencephaly had mostly focal epileptiform discharges. Heterotopia cases had a high rate of EEG abnormalities (72.7%). Patients with PMG had epileptiform abnormality in 59.5% of the cases. Patients with heterotopias and PMG achieved better seizure control in comparison with the other groups. In conclusion, epilepsy is the most common problem in MCD. Epilepsy and EEG findings of patients with MCD are variable and seem to be correlated with the extent of cortical involvement.
Use of magnetic circular dichroism to study dinuclear metallohydrolases and the corresponding biomimetics.

PubMed

Larrabee, James A; Schenk, Gerhard; Mitić, Nataša; Riley, Mark J

2015-09-01

Magnetic circular dichroism (MCD) is a convenient technique for providing structural and mechanistic insight into enzymatic systems in solution. The focus of this review is on aspects of geometric and electronic structure that can be determined by MCD, and how this method can further our understanding of enzymatic mechanisms. Dinuclear Co(II) systems that catalyse hydrolytic reactions were selected to illustrate the approach. These systems all contain active sites with similar structures consisting of two Co(II) ions bridged by one or two carboxylates and a water or hydroxide. In most of these active sites one Co(II) is five-coordinate and one is six-coordinate, with differing binding affinities. It is shown how MCD can be used to determine which binding site--five or six-coordinate--has the greater affinity. Importantly, zero-field-splitting data and magnetic exchange coupling constants may be determined from the temperature and field dependence of MCD data. The relevance of these data to the function of the enzymatic systems is discussed.
The role of chloride in the mechanism of O(2) activation at the mononuclear nonheme Fe(II) center of the halogenase HctB.

PubMed

Pratter, Sarah M; Light, Kenneth M; Solomon, Edward I; Straganz, Grit D

2014-07-02

Mononuclear nonheme Fe(II) (MNH) and α-ketoglutarate (α-KG) dependent halogenases activate O2 to perform oxidative halogenations of activated and nonactivated carbon centers. While the mechanism of halide incorporation into a substrate has been investigated, the mechanism by which halogenases prevent oxidations in the absence of chloride is still obscure. Here, we characterize the impact of chloride on the metal center coordination and reactivity of the fatty acyl-halogenase HctB. Stopped-flow kinetic studies show that the oxidative transformation of the Fe(II)-α-KG-enzyme complex is >200-fold accelerated by saturating concentrations of chloride in both the absence and presence of a covalently bound substrate. By contrast, the presence of substrate, which generally brings about O2 activation at enzymatic MNH centers, only has an ∼10-fold effect in the absence of chloride. Circular dichroism (CD) and magnetic CD (MCD) studies demonstrate that chloride binding triggers changes in the metal center ligation: chloride binding induces the proper binding of the substrate as shown by variable-temperature, variable-field (VTVH) MCD studies of non-α-KG-containing forms and the conversion from six-coordinate (6C) to 5C/6C mixtures when α-KG is bound. In the presence of substrate, a site with square pyramidal five-coordinate (5C) geometry is observed, which is required for O2 activation at enzymatic MNH centers. In the absence of substrate an unusual trigonal bipyramidal site is formed, which accounts for the observed slow, uncoupled reactivity. Molecular dynamics simulations suggest that the binding of chloride to the metal center of HctB leads to a conformational change in the enzyme that makes the active site more accessible to the substrate and thus facilitates the formation of the catalytically competent enzyme-substrate complex. Results are discussed in relation to other MNH dependent halogenases.
Magnetic circular dichroism and computational study of mononuclear and dinuclear iron(iv) complexes† †Electronic supplementary information (ESI) available: VT MCD spectra, VT and VTVH MCD intensity analysis of complex 1, energies, S x, S z values and Boltzmann populations of S = 1 magnetic sublevels as a function of the applied magnetic field, derivation of the excited states arising from the 1b2 → 2b1 transition, determination of the C-term sign of band 1 and the E(2e → 2a1) transitions for complex 1, VTVH MCD spectra, VTVH simulations and the computed MCD spectrum of complex 2. See DOI: 10.1039/c4sc03268c Click here for additional data file.

PubMed Central

Xue, Genqiang; Krivokapic, Itana; Petrenko, Taras

2015-01-01

High-valent iron(iv)-oxo species are key intermediates in the catalytic cycles of a range of O2-activating iron enzymes. This work presents a detailed study of the electronic structures of mononuclear ([FeIV(O)(L)(NCMe)]2+, 1, L = tris(3,5-dimethyl-4-methoxylpyridyl-2-methyl)amine) and dinuclear ([(L)FeIV(O)(μ-O)FeIV(OH)(L)]3+, 2) iron(iv) complexes using absorption (ABS), magnetic circular dichroism (MCD) spectroscopy and wave-function-based quantum chemical calculations. For complex 1, the experimental MCD spectra at 2–10 K are dominated by a broad positive band between 12 000 and 18 000 cm–1. As the temperature increases up to ∼20 K, this feature is gradually replaced by a derivative-shaped signal. The computed MCD spectra are in excellent agreement with experiment, which reproduce not only the excitation energies and the MCD signs of key transitions but also their temperature-dependent intensity variations. To further corroborate the assignments suggested by the calculations, the individual MCD sign for each transition is independently determined from the corresponding electron donating and accepting orbitals. Thus, unambiguous assignments can be made for the observed transitions in 1. The ABS/MCD data of complex 2 exhibit ten features that are assigned as ligand-field transitions or oxo- or hydroxo-to-metal charge transfer bands, based on MCD/ABS intensity ratios, calculated excitation energies, polarizations, and MCD signs. In comparison with complex 1, the electronic structure of the FeIV 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 1111111111111111111111111111111111 1111111111111111111111111111111111 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 1111111111111111111111111111111111 1111111111111111111111111111111111 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 0000000000000000000000000000000000 O site is not significantly perturbed by the binding to another iron(iv) center. This may explain the experimental finding that complexes 1 and 2 have similar reactivities toward C–H bond activation and O-atom transfer. PMID:26417426
Spectroscopic and Computational Investigations of a Mononuclear Manganese(IV)-Oxo Complex Reveal Electronic Structure Contributions to Reactivity

DOE PAGES

Leto, Domenick F.; Massie, Allyssa A.; Rice, Derek B.; ...

2016-11-01

The mononuclear Mn(IV)-oxo complex [Mn IV(O)(N4py)] 2+, where N4py is the pentadentate ligand N,N-bis(2-pyridylmethyl)-N-bis(2-pyridyl)methylamine, we propose to attack C–H bonds by an excited-state reactivity pattern [Cho, K.-B.; Shaik, S.; Nam, W. J. Phys. Chem. Lett. 2012, 3, 2851-2856 (DOI: 10.1021/jz301241z)]. In this model, a 4E excited state is utilized to provide a lower-energy barrier for hydrogen-atom transfer. This proposal is intriguing, as it offers both a rationale for the relatively high hydrogen-atom-transfer reactivity of [Mn IV(O)(N4py)] 2+ and a guideline for creating more reactive complexes through ligand modification. Here we employ a combination of electronic absorption and variable-temperature magnetic circularmore » dichroism (MCD) spectroscopy to experimentally evaluate this excited-state reactivity model. Using these spectroscopic methods, in conjunction with time-dependent density functional theory (TD-DFT) and complete-active space self-consistent-field calculations (CASSCF), we define the ligand-field and charge-transfer excited states of [MnIV(O)(N4py)]2+. Through a graphical analysis of the signs of the experimental C-term MCD signals, we unambiguously assign a low-energy MCD feature of [Mn IV(O)(N4py)] 2+ as the 4E excited state predicted to be involved in hydrogen-atom-transfer reactivity. The CASSCF calculations predict enhanced Mn III-oxyl character on the excited-state 4E surface, consistent with previous DFT calculations. Potential-energy surfaces, developed using the CASSCF methods, are used to determine how the energies and wave functions of the ground and excited states evolved as a function of Mn=O distance. Furthermore, the unique insights into ground- and excited-state electronic structure offered by these spectroscopic and computational studies are harmonized with a thermodynamic model of hydrogen-atom-transfer reactivity, which predicts a correlation between transition-state barriers and driving force« less
Spectroscopic and Computational Investigations of a Mononuclear Manganese(IV)-Oxo Complex Reveal Electronic Structure Contributions to Reactivity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leto, Domenick F.; Massie, Allyssa A.; Rice, Derek B.

The mononuclear Mn(IV)-oxo complex [Mn IV(O)(N4py)] 2+, where N4py is the pentadentate ligand N,N-bis(2-pyridylmethyl)-N-bis(2-pyridyl)methylamine, we propose to attack C–H bonds by an excited-state reactivity pattern [Cho, K.-B.; Shaik, S.; Nam, W. J. Phys. Chem. Lett. 2012, 3, 2851-2856 (DOI: 10.1021/jz301241z)]. In this model, a 4E excited state is utilized to provide a lower-energy barrier for hydrogen-atom transfer. This proposal is intriguing, as it offers both a rationale for the relatively high hydrogen-atom-transfer reactivity of [Mn IV(O)(N4py)] 2+ and a guideline for creating more reactive complexes through ligand modification. Here we employ a combination of electronic absorption and variable-temperature magnetic circularmore » dichroism (MCD) spectroscopy to experimentally evaluate this excited-state reactivity model. Using these spectroscopic methods, in conjunction with time-dependent density functional theory (TD-DFT) and complete-active space self-consistent-field calculations (CASSCF), we define the ligand-field and charge-transfer excited states of [MnIV(O)(N4py)]2+. Through a graphical analysis of the signs of the experimental C-term MCD signals, we unambiguously assign a low-energy MCD feature of [Mn IV(O)(N4py)] 2+ as the 4E excited state predicted to be involved in hydrogen-atom-transfer reactivity. The CASSCF calculations predict enhanced Mn III-oxyl character on the excited-state 4E surface, consistent with previous DFT calculations. Potential-energy surfaces, developed using the CASSCF methods, are used to determine how the energies and wave functions of the ground and excited states evolved as a function of Mn=O distance. Furthermore, the unique insights into ground- and excited-state electronic structure offered by these spectroscopic and computational studies are harmonized with a thermodynamic model of hydrogen-atom-transfer reactivity, which predicts a correlation between transition-state barriers and driving force« less
Inter-Annual Variability of Burned Area in Brazil Based on a Synergistic use of Information Derived from MODIS and Landsat-TM

NASA Astrophysics Data System (ADS)

Libonati, R.; Dacamara, C. C.; Setzer, A. W.; Morelli, F.

2014-12-01

A procedure is presented that allows using information from the MODerate resolution Imaging Spectroradiometer (MODIS) sensor to improve the quality of monthly burned area estimates over Brazil. The method integrates MODIS derived information from two sources; the NASA MCD64A1 Direct Broadcast Monthly Burned Area Product and INPE's Monthly Burned Area MODIS product (AQM-MODIS). The latter product relies on an algorithm that was specifically designed for ecosystems in Brazil, taking advantage of the ability of MIR reflectances to discriminate burned areas. Information from both MODIS products is incorporated by means of a linear regression model where an optimal estimate of the burned area is obtained as a linear combination of burned area estimates from MCD64A1 and AQM-MODIS. The linear regression model is calibrated using as optimal estimates values of burned area derived from Landsat TM during 2005 and 2006 over Jalapão, a region of Cerrado covering an area of 187 x 187 km2. Obtained values of coefficients for MCD64A1 and AQM-MODIS were 0.51 and 0.35, respectively and the root mean square error was 7.6 km2. Robustness of the model was checked by calibrating the model separately for 2005 and 2006 and cross-validating with 2006 and 2005; coefficients for 2005 (2006) were 0.46 (0.54) for MCD64A1 and 0.35 (0.35) for AQM-MODIS and the corresponding root mean square errors for 2006 (2005) were 7.8 (7.4) km2. The linear model was then applied to Brazil as well as to the six Brazilian main biomes, namely Cerrado, Amazônia, Caatinga, Pantanal, Mata Atlântica and Pampa. As to be expected the interannual variability based on the proposed synergistic use of MCD64A1, AQM-MODIS and Landsat Tm data for the period 2005-2010 presents marked differences with the corresponding amounts derived from MCD64A1 alone. For instance during the considered period, values (in 103 km2) from the proposed approach (from MCD64A1) are 399 (142), 232 (62), 559 (259), 274 (73), 219 (31) and 415 (251). Values obtained with the proposed approach may be viewed as an improved alternative to the currently available products over Brazil.
Basic mechanisms of MCD in animal models.

PubMed

Battaglia, Giorgio; Becker, Albert J; LoTurco, Joseph; Represa, Alfonso; Baraban, Scott C; Roper, Steven N; Vezzani, Annamaria

2009-09-01

Epilepsy-associated glioneuronal malformations (malformations of cortical development [MCD]) include focal cortical dysplasias (FCD) and highly differentiated glioneuronal tumors, most frequently gangliogliomas. The neuropathological findings are variable but suggest aberrant proliferation, migration, and differentiation of neural precursor cells as essential pathogenetic elements. Recent advances in animal models for MCDs allow new insights in the molecular pathogenesis of these epilepsy-associated lesions. Novel approaches, presented here, comprise RNA interference strategies to generate and study experimental models of subcortical band heterotopia and study functional aspects of aberrantly shaped and positioned neurons. Exciting analyses address impaired NMDA receptor expression in FCD animal models compared to human FCDs and excitatory imbalances in MCD animal models such as lissencephaly gene ablated mice as well as in utero irradiated rats. An improved understanding of relevant pathomechanisms will advance the development of targeted treatment strategies for epilepsy-associated malformations.
Electrically controlled magnetic circular dichroism and Faraday rotation in graphene

NASA Astrophysics Data System (ADS)

Kuzmenko, Alexey; Poumirol, Jean-Marie; Liu, Peter Q. Liu; Slipchenko, Tetiana; Nikitin, Alexey; Martin-Moreno, Luis; Faist, Jerome

Magnetic circular dichroism (MCD) and Faraday rotation (FR) are the fundamental phenomena of great practical importance arising from the breaking of the time reversal symmetry by a magnetic field. In most materials the strength and the sign of these effects can be only controlled by the field value and its orientation. Using broadband terahertz magneto-electro-optical spectroscopy, we demonstrate that in graphene both the MCD and the FR can be modulated in intensity, tuned in frequency and, importantly, inverted using only electrostatic doping at a fixed magnetic field due to the unique properties of the Dirac fermions. Our results indicate the fundamental possibility of compact, efficient, electrically invertible and wavelength-tunable non-reciprocal passive terahertz elements based on graphene operating at ambient temperature.
Castleman's Disease: From Basic Mechanisms to Molecular Therapeutics

PubMed Central

El-Osta, Hazem E.

2011-01-01

Castleman's disease is a rare lymphoproliferative disorder in which there has been recent progress in elucidating underlying mechanisms with potential therapeutic implications. Unicentric Castleman's disease is an indolent condition that is often treated with local approaches. In contrast, patients with multicentric Castleman's disease (MCD) have a less favorable prognosis and require systemic treatment. Cytotoxic chemotherapy, with its attendant risk for toxicity, has been widely used to treat MCD, with variable efficacy. The discovery of putative etiologic factors and targets in MCD, particularly human herpes virus 8, CD20, and interleukin (IL)-6, has been translated into the use of rituximab and anti–IL-6-based therapy, as well as antiviral agents. In this article, we review the current state of the art of our understanding of Castleman's disease and its treatment and we provide insight into future treatment strategies based on disease biology. PMID:21441298
Electronic structure and spectroscopic properties of mononuclear manganese(III) Schiff base complexes: a systematic study on [Mn(acen)X] complexes by EPR, UV/vis, and MCD spectroscopy (X = Hal, NCS).

PubMed

Westphal, Anne; Klinkebiel, Arne; Berends, Hans-Martin; Broda, Henning; Kurz, Philipp; Tuczek, Felix

2013-03-04

The manganese(III) Schiff base complexes [Mn(acen)X] (H2acen: N,N'-ethylenebis(acetylacetone)imine, X: I(-), Br(-), Cl(-), NCS(-)) are considered as model systems for a combined study of the electronic structure using vibrational, UV/vis absorption, parallel-mode electron paramagnetic resonance (EPR) and low-temperature magnetic circular dichroism (MCD) spectroscopy. By variation of the co-ligand X, the influence of the axial ligand field within a given square-pyramidal coordination geometry on the UV/vis, EPR, and MCD spectra of the title compounds is investigated. Between 25000 and 35000 cm(-1), the low-temperature MCD spectra are dominated by two very intense, oppositely signed pseudo-A terms, referred to as "double pseudo-A terms", which change their signs within the [Mn(acen)X] series dependent on the axial ligand X. Based on molecular orbital (MO) and symmetry considerations, these features are assigned to π(n.b.)(s, a) → yz, z(2) ligand-to-metal charge transfer transitions. The individual MCD signs are directly determined from the calculated MOs of the [Mn(acen)X] complexes. The observed sign change is explained by an inversion of symmetry among the π(n.b.)(s, a) donor orbitals which leads to an interchange of the positive and negative pseudo-A terms constituting the "double pseudo-A term".
A General Multidimensional Model for the Measurement of Cultural Differences.

ERIC Educational Resources Information Center

Olmedo, Esteban L.; Martinez, Sergio R.

A multidimensional model for measuring cultural differences (MCD) based on factor analytic theory and techniques is proposed. The model assumes that a cultural space may be defined by means of a relatively small number of orthogonal dimensions which are linear combinations of a much larger number of cultural variables. Once a suitable,…

Monitoring Functional Traits of Alpine Vegetation using Remote Sensing

NASA Astrophysics Data System (ADS)

Li, C.; Wulf, H.; Schaepman, M. E.; Schmid, B.

2016-12-01

Plant functional traits can be used to study the interactions between plants and ecosystem functioning as well as the response of plants to various environmental pressures. Continuous monitoring of plant functional traits dynamics on a large spatial scale is important to understand the mechanisms of ecosystem function degradation, especially on the Qinghai-Tibet Plateau. In this study, we investigated spatiotemporal trends of functional traits (i.e., chlorophyll content, phenology, leaf area index proxy of leaf size and above ground biomass proxy of leaf mass) in the eastern part of the Qinghai-Tibet Plateau based on the combined analysis of multi-sensor satellite data and field observations at three spatial scales (ground-truth data at 1 m, Landsat at 30 m, MODIS at 500 m), and analyzed potential factors contribute to their spatiotemporal trends. Chlorophyll content (Chl) and biomass was retrieved based on 94 field plots measurements. LAI was analyzed using MCD15A3H product and estimated values using digital hemispherical photographs in the field. Plant phenology will be processed based on MODIS NDVI time series and hourly Phenocam observations. The preliminary results show that (1) Chl, LAI and biomass show high spatial heterogeneity trends and increase in 2001 - 2015. (2) Elevation played an important role in the spatial pattern of LAI and Chl variation in 15 years. A dividing line of approximately 3800 m exists and shows that below this line, LAI and Chl changes more complicated, showing significantly positive and negative linear trend. While above this altitude, the change rate of two variables keeps relatively stable. Vegetation in low elevation is exposed to high habitat diversity by showing high Chl, LAI and biomass spatial heterogeneity. The vegetation in high habitat diversity may be more sensitive to climatic variables and human activities than higher elevation since warming contribute to the positive trend of traits while human factors like urbanization might be explain negative trend in relative low altitude (below 3800 m). (3) Temperature contribute to the above functional traits variation than precipitation, especially temperature is more correlated to the functional traits of widely distributed vegetation type than narrow-ranging vegetation type.
MODIS land cover uncertainty in regional climate simulations

NASA Astrophysics Data System (ADS)

Li, Xue; Messina, Joseph P.; Moore, Nathan J.; Fan, Peilei; Shortridge, Ashton M.

2017-12-01

MODIS land cover datasets are used extensively across the climate modeling community, but inherent uncertainties and associated propagating impacts are rarely discussed. This paper modeled uncertainties embedded within the annual MODIS Land Cover Type (MCD12Q1) products and propagated these uncertainties through the Regional Atmospheric Modeling System (RAMS). First, land cover uncertainties were modeled using pixel-based trajectory analyses from a time series of MCD12Q1 for Urumqi, China. Second, alternative land cover maps were produced based on these categorical uncertainties and passed into RAMS. Finally, simulations from RAMS were analyzed temporally and spatially to reveal impacts. Our study found that MCD12Q1 struggles to discriminate between grasslands and croplands or grasslands and barren in this study area. Such categorical uncertainties have significant impacts on regional climate model outputs. All climate variables examined demonstrated impact across the various regions, with latent heat flux affected most with a magnitude of 4.32 W/m2 in domain average. Impacted areas were spatially connected to locations of greater land cover uncertainty. Both biophysical characteristics and soil moisture settings in regard to land cover types contribute to the variations among simulations. These results indicate that formal land cover uncertainty analysis should be included in MCD12Q1-fed climate modeling as a routine procedure.
Elucidating the Role of the Proximal Cysteine Hydrogen Bonding Network in Ferric Cytochrome P450cam and corresponding mutants using Magnetic Circular Dichroism Spectroscopy†

PubMed Central

Galinato, Mary Grace I.; Spolitak, Tatyana; Ballou, David P.; Lehnert, Nicolai

2011-01-01

Although there has been extensive research on various Cytochrome P450s, especially Cyt P450cam, there is much to be learned about the mechanism of how its functional unit, a heme b ligated by an axial cysteine, is finely tuned for catalysis by its second coordination sphere. Here we study how the hydrogen bonding network affects the proximal cysteine and the Fe-S(Cys) bond in ferric Cyt P450cam. This is accomplished using low-temperature magnetic circular dichroism (MCD) spectroscopy on wild-type (wt) Cyt P450cam, and on the mutants Q360P (pure ferric high-spin at low temperature) and L358P with which the “Cys pocket” has been altered (by removing amino acids involved in the hydrogen bonding network), and Y96W (pure ferric low-spin). The MCD spectrum of Q360P reveals fourteen electronic transitions between 15200 and 31050 cm-1. Variable-temperature variable-field (VTVH) saturation curves were used to determine the polarizations of these electronic transitions, with respect to in-plane (xy) and out-of-plane (z) polarization relative to the heme. The polarizations, oscillator strengths, and TD-DFT calculations were then used to assign the observed electronic transitions. In the lower energy region, prominent bands at 15909 and 16919 cm-1 correspond to porphyrin (P) → Fe charge transfer (CT) transitions. The band at 17881 cm-1 has distinct sulfur S(π)→ Fe CT contributions. The Q band is observed as a pseudo A-term (derivative shape) at 18604 and 19539 cm-1. In the case of the Soret band, the negative component of the expected pseudo A-term is split into two features due to mixing with another π → π* and potentially a P → Fe CT excited state. These features are observed at 23731, 24859, and 25618 cm-1. Most importantly, the broad, prominent band at 28570 cm-1 is assigned to the S(σ)→ Fe CT transition, whose intensity is generated through a multitude of CT transitions with strong iron character. For wt, Q360P, and L358P, this band occurs at 28724, 28570, and 28620 cm-1, respectively. The small shift of this feature upon altering the hydrogen bonds to the proximal cysteine indicates that the role of the Cys pocket is not primarily for electronic fine tuning of the sulfur donor strength, but is more for stabilizing the proximal thiolate against external reactants (NO, O2, H3O+), and for properly positioning cysteine to coordinate to the iron center. This aspect is discussed in detail. PMID:21158478
Variability of surface temperature in agricultural fields of central California

NASA Technical Reports Server (NTRS)

Hatfield, J. L.; Millard, J. P.; Goettelman, R. C.

1982-01-01

In an attempt to evaluate the relationship between hand-held infrared thermometers and aircraft thermal scanners in near-level terrain and to quantify the variability of surface temperatures within individual fields, ground-based and aircraft thermal sensor measurements were made along a 50-km transect on 3 May 1979 and a 20-km transect on 7 August 1980. These comparisons were made on fields near Davis, California. Agreement was within 1 C for fields covered with vegetation and 3.6 C for bare, dry fields. The variability within fields was larger for bare, dry fields than for vegetatively covered fields. In 1980, with improvements in the collection of ground truth data, the agreement was within 1 C for a variety of fields.
Assessment of MODIS BRDF/Albedo Model Parameters (MCD43A1 Collection 6) for directional reflectance retrieval

NASA Astrophysics Data System (ADS)

Che, X.; Feng, M.; Sexton, J. O.; Channan, S.; Yang, Y.; Song, J.

2017-12-01

Reflection of solar radiation from Earth's surface is the basis for retrieving many higher-level terrestrial attributes such as vegetation indices and albedo. However, reflectance varies with the illumination and viewing geometry of observation (Bi-directional Reflectance Distribution Function (BRDF)) even with constant surface properties, and correcting for these artifacts increases precision of comparisons of images and time series acquired from satellites with different illumination and observation geometries. The operational MODIS processing inverts MODIS BRDF/Albedo Model Parameters (MCD43A1) to retrieve directional reflectance at any solar and view angles, and recently the MCD43A1 (Collection 6) was updated and distributed. We quantified the ability of MCD43A1 Collection 6 for retrieving directional reflectance compared to Collection 5 and tested whether changes in the land surface change over a 16-day composite period affect time series of directional reflectance. Correcting the Terra MODIS daily Surface Reflectance (MOD09GA) to the illumination and view geometries of coincidental Aqua MODIS daily Surface Reflectance (MYD09GA), MCD43A4 Collection 6 and Landsat-5 TM imagery show that the BRDF-corrected results using MCD43A1 Collection 6 hold a higher consistency with higher R2 (0.63 0.955), the slopes close to unity (0.718 0.955) and the lower RMSD (0.422 3.142) and MAE (0.282 1.735) reduced by about 10% than Collection 5. A simple parameter calibration to evaluate the variability of the roughness (R) and the volumetric (V) BRDF parameters for MCD43A1 Collection 6 shows that the assumption of stable land surface characteristic over 16-days composite period, used for BRDF parameters inversion, is plausible in spite of small improvement of directional reflectance and BRDF parameters time series. The larger fluctuations for the MCD43A1 Collection 6 do not have a discernable impact on the reflectance time series. All of these results shows that MCD43A1 Collection 6 product with daily temporal resolution is a valuable product representing the anisotropy of surface features, and reasonably more accurate for directional reflectance derivation at any solar and view geometries than Collection 5, which holds a great potential for many Earth's science research.
Malformations of cortical development: clinical spectrum in a series of 101 patients and review of the literature (Part I).

PubMed

Güngör, Serdal; Yalnizoğlu, Dilek; Turanli, Güzide; Saatçi, Işil; Erdoğan-Bakar, Emel; Topçu, Meral

2007-01-01

Patients with malformations of cortical development (MCD) present with a wide spectrum of clinical manifestations ranging from asymptomatic cases to those with epilepsy and neurodevelopmental problems. Thorough clinical delineation of patients with MCD may provide clues for future phenotype-genotype correlation studies. We studied clinical features of patients with MCD, including developmental risk factors and family history. We evaluated 10 patients with MCD at Hacettepe University Children's Hospital, Department of Pediatric Neurology. All patients underwent neurological evaluation with detailed medical and family history, and neuropsychological evaluation. Routine EEG and MRI were obtained. The patients were between 1 month and 19 years of age (mean: 6.1 +/- 4.4 years). Fifty-four patients were diagnosed with polymicrogyria (PMG), 23 patients with lissencephaly, 12 patients with schizencephaly, and 12 patients with heterotopia. Parents were relatives in 31.7% of the cases; consanguinity was most common in patients with lissencephaly and other MCDs with diffuse/bilateral involvement. Initial clinical presentation was seizures in 61.4% of the cases, developmental delays in 12.9%, and microcephaly in 9.9%. Neurological evaluation revealed most severe abnormalities in patients with lissencephaly, and relatively better outcome in patients with heterotopias. Cognitive functions were better in patients with heterotopias compared to other groups. Overall, 71.3% of patients ha epilepsy. In conclusion, initial presentation and clinical course of patients with MCD are variable and seem to be correlated with the extent of cortical involvement. Epilepsy and mental retardation are the most common problems. The most severe clinical outcome was seen in patients with lissencephaly.
Dzyaloshinskii-Moriya interaction in α -Fe2O3 measured by magnetic circular dichroism in resonant inelastic soft x-ray scattering

NASA Astrophysics Data System (ADS)

Miyawaki, Jun; Suga, Shigemasa; Fujiwara, Hidenori; Urasaki, Masato; Ikeno, Hidekazu; Niwa, Hideharu; Kiuchi, Hisao; Harada, Yoshihisa

2017-12-01

Fe L2 ,3-edge x-ray absorption spectra (XAS) and magnetic circular dichroism (MCD) in resonant inelastic x-ray scattering (RIXS) of α -Fe2O3 were measured to identify the electronic structure responsible for its weak ferromagnetism caused by the Dzyaloshinskii-Moriya interaction (DMI) at room temperature. In contrast to negligible MCD in XAS, MCD in RIXS (RIXS-MCD) was clearly observed in the d d excitation at 1.8 eV via excitation to charge-transfer states. Furthermore, RIXS-MCD showed a crystal orientation dependence, indicating that the observed RIXS-MCD originated from DMI. The observed RIXS-MCD is well described by ab initio charge-transfer multiplet calculations, revealing that the RIXS-MCD derives from spin flip excitations at delocalized eg orbitals. By the combination of the experiments and calculations, RIXS-MCD has unraveled that the origin of DMI in α -Fe2O3 is the eg orbitals, which are strongly hybridized with the 2 p orbitals of oxygen atoms. The results demonstrate the importance of RIXS-MCD for identifying the electronic structure related to DMI.
Size dependent magnetic and magneto-optical properties of Ni0.2Zn0.8Fe2O4 nanoparticles

NASA Astrophysics Data System (ADS)

Li, Oksana A.; Lin, Chun-Rong; Chen, Hung-Yi; Hsu, Hua-Shu; Shih, Kun-Yauh; Edelman, Irina S.; Wu, Kai-Wun; Tseng, Yaw-Teng; Ovchinnikov, Sergey G.; Lee, Jiann-Shing

2016-06-01

Ni0.2Zn0.8Fe2O4 spinel nanoparticles have been synthesized by combustion method. Average particles size varies from 15.5 to 50.0 nm depending on annealing temperature. Correlations between particles size and magnetic and magneto-optical properties are investigated. Magnetization dependences on temperature and external magnetic field correspond to the sum of paramagnetic and superparamagnetic response. Critical size of single-domain transition is found to be 15.9 nm. Magnetic circular dichroism (MCD) studies of nickel zinc spinel are presented here for the first time. The features in magnetic circular dichroism spectrum are assigned to the one-ion d-d transitions in Fe3+ and Ni2+ ions, as well to the intersublattice and intervalence charge transfer transitions. The MCD spectrum rearrangement was revealed with the change of the nanoparticles size.
A 4-term energy level scheme for the high-spin ferrous hemoproteins: evidence for the 5E eta, and 5B2 terms as the ground multiplets in hemoproteins with a histidine and a cysteine protein-derived heme ligand, respectively.

PubMed

Oganesyan, V S; Sharonov, Y A

1997-03-01

We have carried out analysis of the electronic level scheme of the high-spin ferrous hemoproteins by simultaneous fit of the adjustable parameters of a 4-term theoretical model to low-temperature magnetic circular dichroism (MCD), room temperature absorption spectra and available magnetic susceptibility and or Mössbauer data of myoglobin, horseradish peroxidase and cytochrome P450. The high reliability of the ligand field parameter values obtained for deoxymyoglobin is confirmed by good agreement between the predicted and observed magnetic field dependences of MCD and magnetization not used in the fit procedure. In addition, an energy gap between the ground and first excited singlets, estimated to be 4.2 cm-1, agrees well with the value of approximately 4 cm-1 derived from the far-infrared magnetic resonance. Our computer and explicit theoretical analyses give strong evidence that large distinctions in the shape, intensity and temperature behaviour of the MCD of Mb and HRP from those of cytochrome P450 can be described only if the ground manifold in these proteins is 5E eta and 5B2, respectively. The changes in relative energies of the one-electron 3d-orbitals on substitution of an imidazole of histidine for a sulphur anion of cysteine as a protein-derived heme iron ligand are rationalized by the lower ionization potential of the negatively charged sulphur ligand and the higher pi-orbital overlap of its lone pair orbitals with the iron d pi-orbitals compared to the imidazole ligand.
Temperature, Pressure, and Infrared Image Survey of an Axisymmetric Heated Exhaust Plume

NASA Technical Reports Server (NTRS)

Nelson, Edward L.; Mahan, J. Robert; Birckelbaw, Larry D.; Turk, Jeffrey A.; Wardwell, Douglas A.; Hange, Craig E.

1996-01-01

The focus of this research is to numerically predict an infrared image of a jet engine exhaust plume, given field variables such as temperature, pressure, and exhaust plume constituents as a function of spatial position within the plume, and to compare this predicted image directly with measured data. This work is motivated by the need to validate computational fluid dynamic (CFD) codes through infrared imaging. The technique of reducing the three-dimensional field variable domain to a two-dimensional infrared image invokes the use of an inverse Monte Carlo ray trace algorithm and an infrared band model for exhaust gases. This report describes an experiment in which the above-mentioned field variables were carefully measured. Results from this experiment, namely tables of measured temperature and pressure data, as well as measured infrared images, are given. The inverse Monte Carlo ray trace technique is described. Finally, experimentally obtained infrared images are directly compared to infrared images predicted from the measured field variables.
Co-production of hydrogen and carbon nanotubes on nickel foam via methane catalytic decomposition

NASA Astrophysics Data System (ADS)

Ping, Dan; Wang, Chaoxian; Dong, Xinfa; Dong, Yingchao

2016-04-01

The co-production of COx-free hydrogen and carbon nanotubes (CNTs) was achieved on 3-dimensional (3D) macroporous nickel foam (NF) via methane catalytic decomposition (MCD) over nano-Ni catalysts using chemical vapor deposition (CVD) technique. By a simple coating of a NiO-Al2O3 binary mixture sol followed by a drying-calcination-reduction treatment, NF supported composite catalysts (denoted as NiyAlOx/NF) with Al2O3 transition-layer incorporated with well-dispersed nano-Ni catalysts were successfully prepared. The effects of Ni loading, calcination temperature and reaction temperature on the performance for simultaneous production of COx-free hydrogen and CNTs were investigated in detail. Catalysts before and after MCD were characterized by XRD, TPR, SEM, TEM, TG and Raman spectroscopy technology. Results show that increasing Ni loading, lowering calcination temperature and optimizing MCD reaction temperature resulted in high production efficiency of COx-free H2 and carbon, but broader diameter distribution of CNTs. Through detailed parameter optimization, the catalyst with a Ni/Al molar ratio of 0.1, calcination temperature of 550 °C and MCD temperature of 650 °C was favorable to simultaneously produce COx-free hydrogen with a growth rate as high as 10.3% and CNTs with uniform size on NF.
Epilepsy surgery in children and adolescents with malformations of cortical development--outcome and impact of the new ILAE classification on focal cortical dysplasia.

PubMed

Mühlebner, Angelika; Gröppel, Gudrun; Dressler, Anastasia; Reiter-Fink, Edith; Kasprian, Gregor; Prayer, Daniela; Dorfer, Christian; Czech, Thomas; Hainfellner, Johannes A; Coras, Roland; Blümcke, Ingmar; Feucht, Martha

2014-11-01

To determine long-term efficacy and safety of epilepsy surgery in children and adolescents with malformations of cortical development (MCD) and to identify differences in seizure outcome of the various MCD subgroups. Special focus was set on the newly introduced International League Against Epilepsy (ILAE) classification of focal cortical dysplasia (FCD). This is a single center retrospective cross-sectional analysis of prospectively collected data. age at surgery <18 years, pre-surgical evaluation and epilepsy surgery performed at the Vienna pediatric epilepsy center, histologically proven MCD, complete follow-up data for at least 12 months. Clinical variables evaluated: type and localization of MCD, type of surgery and a variety of clinical characteristics reported to be associated with (un-)favorable outcomes. MCD were classified following the existing classification schemes (Barkovich et al., 2012. Brain. 135, 1348-1369; Palmini et al., 2004. Neurology. 62, S2-S8) and the ILAE classification for FCD recently proposed by Blümcke in 2011. Seizure outcome was classified using the ILAE classification proposed by Wieser in 2001. 60 Patients (51.7% male) were included. Follow up was up to 14 (mean 4.4 ± 3.2) years. Mean age at surgery was 8.0 ± 6.0 (median 6.0) years; mean age at epilepsy onset was 2.9 ± 3.2 (median 2.0) years; duration of epilepsy before surgery was 4.8 ± 4.4 (median 3.0) years. 80% of the patients were seizure free at last follow-up. AEDs were successfully withdrawn in 56.7% of all patients. Extended surgery, lesion localization in the temporal lobes and absence of inter-ictal spikes in postsurgical EEG recordings were predictive of favorable seizure outcomes after surgery. However, no association was found between outcome and MCD sub-types. Epilepsy surgery is highly effective in carefully selected drug-resistant children with MCD. Surrogate markers for complete resection of the epileptogenic zone remain the only significant predictors for seizure freedom after surgery. Copyright © 2014 Elsevier B.V. All rights reserved.
High Field Magnetic Circular Dichroism in Ferromagnetic InMnSb and InMnAs

NASA Astrophysics Data System (ADS)

Meeker, M. A.; Magill, B. A.; Khodaparast, G. A.; Saha, D.; Stanton, C. J.; McGill, S.; Wessels, B. W.

An understanding of the fundamental interactions in narrow gap ferromagnetic semiconductors such as InMnAs and InMnSb has been developed primarily from static magnetization and electrical transport measurements. In this study, to provide a better understanding of the coupling of the Mn impurities to the conduction and valence bands through the sp-d exchange interactions, we have performed magnetic circular dichroism measurements (MCD) on MOVPE grown InMnAs and InMnSb. In our samples, the Mn content varies from 2% to 10.7% and all the samples have Curie temperatures above 300 K. The samples were photo-excited using a Quartz Tungsten Halogen lamp with energies ranging between 0.92-1.45 eV, and in magnetic fields up to 31 T. The temperatures ranged from 15-190 K. Comparison of the observed MCD with theoretical calculations provides a direct method to probe the band structure including the temperature dependence of the spin-orbit split-off bandgap and g-factors, as well as a means to estimate the sp-d coupling constants. Supported by the AFOSR through grant FA9550-14-1-0376, NSF-Career Award DMR-0846834 , NSF-DMR-60035274 , NSF-DMR-1305666, NSF MRI program (DMR-1229217).
Wright Laboratory Research and Development Facilities Handbook

DTIC Science & Technology

1992-08-01

properties o. superconductors SPECIAL/UNIQUE CAPABILITIES: Two superconducting coils: 3-inch bore, 10 Tesla coil. 20 kilojoule repetitively pulsed coil 7 inch...bore, cryogenically cooled 14 Tesla coil INSTRUMENTATION: Computer Controlled Variable Temperature (2-400K) and Field (0-5 Tesla ) Squid Susceptometer...Variable Temperature (10-80K) and Field (0-10 Tesla ) Transport Current Measurement Apparatus RF Source Sputtering Rig, Optical Microscope, Furnaces
Gravitational biology and the mammalian circadian timing system

NASA Technical Reports Server (NTRS)

Fuller, Charles A.; Murakami, Dean M.; Sulzman, Frank M.

1989-01-01

Using published reports, this paper compares and contrasts results on the effects of altered gravitational fields on the regulation in mammals of several physiological and behavioral variables with the circadian regulation of the same variables. The variables considered include the temperature regulation, heart rate, activity, food intake, and calcium balance. It is shown that, in rats, the homeostatic regulation of the body temperature, heart rate, and activity becomes depressed following exposure to a 2 G hyperdynamic field, and recovers within 6 days of 1 G condition. In addition, the circadian rhythms of these variables exhibit a depression of the rhythm amplitude; a recovery of this condition requires a minimum of 7 days.
An 'Observational Large Ensemble' to compare observed and modeled temperature trend uncertainty due to internal variability.

NASA Astrophysics Data System (ADS)

Poppick, A. N.; McKinnon, K. A.; Dunn-Sigouin, E.; Deser, C.

2017-12-01

Initial condition climate model ensembles suggest that regional temperature trends can be highly variable on decadal timescales due to characteristics of internal climate variability. Accounting for trend uncertainty due to internal variability is therefore necessary to contextualize recent observed temperature changes. However, while the variability of trends in a climate model ensemble can be evaluated directly (as the spread across ensemble members), internal variability simulated by a climate model may be inconsistent with observations. Observation-based methods for assessing the role of internal variability on trend uncertainty are therefore required. Here, we use a statistical resampling approach to assess trend uncertainty due to internal variability in historical 50-year (1966-2015) winter near-surface air temperature trends over North America. We compare this estimate of trend uncertainty to simulated trend variability in the NCAR CESM1 Large Ensemble (LENS), finding that uncertainty in wintertime temperature trends over North America due to internal variability is largely overestimated by CESM1, on average by a factor of 32%. Our observation-based resampling approach is combined with the forced signal from LENS to produce an 'Observational Large Ensemble' (OLENS). The members of OLENS indicate a range of spatially coherent fields of temperature trends resulting from different sequences of internal variability consistent with observations. The smaller trend variability in OLENS suggests that uncertainty in the historical climate change signal in observations due to internal variability is less than suggested by LENS.
Wright Research and Development Center Test Facilities Handbook

DTIC Science & Technology

1990-01-01

Variable Temperature (2-400K) and Field (0-5 Tesla) Squid Susceptometer Variable Temperature (10-80K) and Field (0-10 Tesla) Transport Current...determine products of combustion using extraction type probes INSTRUMENTATION: Mini computer/data acquisiton system Networking provides access to larger...data recorder, Masscomp MC-500 computer with acquisition digitizer, laser and ink -jet printers,lo-pass filters, pulse code modulation AVAILABILITY
Kiloampere, Variable-Temperature, Critical-Current Measurements of High-Field Superconductors

PubMed Central

Goodrich, LF; Cheggour, N; Stauffer, TC; Filla, BJ; Lu, XF

2013-01-01

We review variable-temperature, transport critical-current (Ic) measurements made on commercial superconductors over a range of critical currents from less than 0.1 A to about 1 kA. We have developed and used a number of systems to make these measurements over the last 15 years. Two exemplary variable-temperature systems with coil sample geometries will be described: a probe that is only variable-temperature and a probe that is variable-temperature and variable-strain. The most significant challenge for these measurements is temperature stability, since large amounts of heat can be generated by the flow of high current through the resistive sample fixture. Therefore, a significant portion of this review is focused on the reduction of temperature errors to less than ±0.05 K in such measurements. A key feature of our system is a pre-regulator that converts a flow of liquid helium to gas and heats the gas to a temperature close to the target sample temperature. The pre-regulator is not in close proximity to the sample and it is controlled independently of the sample temperature. This allows us to independently control the total cooling power, and thereby fine tune the sample cooling power at any sample temperature. The same general temperature-control philosophy is used in all of our variable-temperature systems, but the addition of another variable, such as strain, forces compromises in design and results in some differences in operation and protocol. These aspects are analyzed to assess the extent to which the protocols for our systems might be generalized to other systems at other laboratories. Our approach to variable-temperature measurements is also placed in the general context of measurement-system design, and the perceived advantages and disadvantages of design choices are presented. To verify the accuracy of the variable-temperature measurements, we compared critical-current values obtained on a specimen immersed in liquid helium (“liquid” or Ic liq) at 5 K to those measured on the same specimen in flowing helium gas (“gas” or Ic gas) at the same temperature. These comparisons indicate the temperature control is effective over the superconducting wire length between the voltage taps, and this condition is valid for all types of sample investigated, including Nb-Ti, Nb3Sn, and MgB2 wires. The liquid/gas comparisons are used to study the variable-temperature measurement protocol that was necessary to obtain the “correct” critical current, which was assumed to be the Ic liq. We also calibrated the magnetoresistance effect of resistive thermometers for temperatures from 4 K to 35 K and magnetic fields from 0 T to 16 T. This calibration reduces systematic errors in the variable-temperature data, but it does not affect the liquid/gas comparison since the same thermometers are used in both cases. PMID:26401435
Climate variability decreases species richness and community stability in a temperate grassland.

PubMed

Zhang, Yunhai; Loreau, Michel; He, Nianpeng; Wang, Junbang; Pan, Qingmin; Bai, Yongfei; Han, Xingguo

2018-06-26

Climate change involves modifications in both the mean and the variability of temperature and precipitation. According to global warming projections, both the magnitude and the frequency of extreme weather events are increasing, thereby increasing climate variability. The previous studies have reported that climate warming tends to decrease biodiversity and the temporal stability of community primary productivity (i.e., community stability), but the effects of the variability of temperature and precipitation on biodiversity, community stability, and their relationship have not been clearly explored. We used a long-term (from 1982 to 2014) field data set from a temperate grassland in northern China to explore the effects of the variability of mean temperature and total precipitation on species richness, community stability, and their relationship. Results showed that species richness promoted community stability through increases in asynchronous dynamics across species (i.e., species asynchrony). Both species richness and species asynchrony were positively associated with the residuals of community stability after controlling for its dependence on the variability of mean temperature and total precipitation. Furthermore, the variability of mean temperature reduced species richness, while the variability of total precipitation decreased species asynchrony and community stability. Overall, the present study revealed that species richness and species asynchrony promoted community stability, but increased climate variability may erode these positive effects and thereby threaten community stability.
Analytical and numerical study on cooling flow field designs performance of PEM fuel cell with variable heat flux

NASA Astrophysics Data System (ADS)

Afshari, Ebrahim; Ziaei-Rad, Masoud; Jahantigh, Nabi

2016-06-01

In PEM fuel cells, during electrochemical generation of electricity more than half of the chemical energy of hydrogen is converted to heat. This heat of reactions, if not exhausted properly, would impair the performance and durability of the cell. In general, large scale PEM fuel cells are cooled by liquid water that circulates through coolant flow channels formed in bipolar plates or in dedicated cooling plates. In this paper, a numerical method has been presented to study cooling and temperature distribution of a polymer membrane fuel cell stack. The heat flux on the cooling plate is variable. A three-dimensional model of fluid flow and heat transfer in cooling plates with 15 cm × 15 cm square area is considered and the performances of four different coolant flow field designs, parallel field and serpentine fields are compared in terms of maximum surface temperature, temperature uniformity and pressure drop characteristics. By comparing the results in two cases, the constant and variable heat flux, it is observed that applying constant heat flux instead of variable heat flux which is actually occurring in the fuel cells is not an accurate assumption. The numerical results indicated that the straight flow field model has temperature uniformity index and almost the same temperature difference with the serpentine models, while its pressure drop is less than all of the serpentine models. Another important advantage of this model is the much easier design and building than the spiral models.

Predictability of Subsurface Temperature and the AMOC

NASA Astrophysics Data System (ADS)

Chang, Y.; Schubert, S. D.

2013-12-01

GEOS 5 coupled model is extensively used for experimental decadal climate prediction. Understanding the limits of decadal ocean predictability is critical for making progress in these efforts. Using this model, we study the subsurface temperature initial value predictability, the variability of the Atlantic meridional overturning circulation (AMOC) and its impacts on the global climate. Our approach is to utilize the idealized data assimilation technology developed at the GMAO. The technique 'replay' allows us to assess, for example, the impact of the surface wind stresses and/or precipitation on the ocean in a very well controlled environment. By running the coupled model in replay mode we can in fact constrain the model using any existing reanalysis data set. We replay the model constraining (nudging) it to the MERRA reanalysis in various fields from 1948-2012. The fields, u,v,T,q,ps, are adjusted towards the 6-hourly analyzed fields in atmosphere. The simulated AMOC variability is studied with a 400-year-long segment of replay integration. The 84 cases of 10-year hindcasts are initialized from 4 different replay cycles. Here, the variability and predictability are examined further by a measure to quantify how much the subsurface temperature and AMOC variability has been influenced by atmospheric forcing and by ocean internal variability. The simulated impact of the AMOC on the multi-decadal variability of the SST, sea surface height (SSH) and sea ice extent is also studied.
Vortex variable range hopping in a conventional superconducting film

NASA Astrophysics Data System (ADS)

Percher, Ilana M.; Volotsenko, Irina; Frydman, Aviad; Shklovskii, Boris I.; Goldman, Allen M.

2017-12-01

The behavior of a disordered amorphous thin film of superconducting indium oxide has been studied as a function of temperature and magnetic field applied perpendicular to its plane. A superconductor-insulator transition has been observed, though the isotherms do not cross at a single point. The curves of resistance versus temperature on the putative superconducting side of this transition, where the resistance decreases with decreasing temperature, obey two-dimensional Mott variable-range hopping of vortices over wide ranges of temperature and resistance. To estimate the parameters of hopping, the film is modeled as a granular system and the hopping of vortices is treated in a manner analogous to hopping of charges. The reason the long-range interaction between vortices over the range of magnetic fields investigated does not lead to a stronger variation of resistance with temperature than that of two-dimensional Mott variable-range hopping remains unresolved.
Land agroecological quality assessment in conditions of high spatial soil cover variability at the Pereslavskoye Opolye.

NASA Astrophysics Data System (ADS)

Morev, Dmitriy; Vasenev, Ivan

2015-04-01

The essential spatial variability is mutual feature for most natural and man-changed soils at the Central region of European territory of Russia. The original spatial heterogeneity of forest soils has been further complicated by a specific land-use history and human impacts. For demand-driven land-use planning and decision making the quantitative analysis and agroecological interpretation of representative soil cover spatial variability is an important and challenging task that receives increasing attention from private companies, governmental and environmental bodies. Pereslavskoye Opolye is traditionally actively used in agriculture due to dominated high-quality cultivated soddy-podzoluvisols which are relatively reached in organic matter (especially for conditions of the North part at the European territory of Russia). However, the soil cover patterns are often very complicated even within the field that significantly influences on crop yield variability and have to be considered in farming system development and land agroecological quality evaluation. The detailed investigations of soil regimes and mapping of the winter rye yield have been carried in conditions of two representative fields with slopes sharply contrasted both in aspects and degrees. Rye biological productivity and weed infestation have been measured in elementary plots of 0.25 m2 with the following analysis the quality of the yield. In the same plot soil temperature and moisture have been measured by portable devices. Soil sampling was provided from three upper layers by drilling. The results of ray yield detailed mapping shown high differences both in average values and within-field variability on different slopes. In case of low-gradient slope (field 1) there is variability of ray yield from 39.4 to 44.8 dt/ha. In case of expressed slope (field 2) the same species of winter rye grown with the same technology has essentially lower yield and within-field variability from 20 to 29.6 dt/ha. The variability in crop yield between two fields is determined by their differences in mesorelief, A-horizon average thickness and slightly changes in soil temperature. The within-field crop yield variability is determined by microrelief and connected differences in soil moisture. Higher soil cover variability reflects in higher variability of winter ray yield and its quality that could be predicted and planed in conditions of concrete field and year according to principal limiting factors evaluation.
JRC Copernicus Climate Change Service (C3S) F4P platform.

NASA Astrophysics Data System (ADS)

Mota, Bernardo; Cappucci, Fabrizio; Gobron, Nadine

2016-04-01

With the increasing number of Earth Observation satellites and derived land surface products, concerns of quality assurance led the Global Climate Observing System (GCOS) to establish accuracy criteria and standards. In this context, the Climate Change Copernicus Service (C3S) fitness-for-purpose (F4P) platform, developed at the Joint Research Centre, aims assessing the quality of land Essential Climate Variables (ECVs) in compliance with GCOS criteria. In this paper, we first summarize the JRC C3S FP4 goals and secondly present the automatic review platform to assess multi-mission physical consistencies and physical coherence of and between various land products, at global and regional scales. We propose new metrics, such as Gamma Index and Triple Collocation Error Model, for multi-mission product inter-comparison and stability assessment, and resource selection statistical methods to assess physical coherence with other related ECV products. Examples concern the consistency of five global albedo products (GlobAlbedo, GLASS, MCD43C3, GIO and MISR), between 2000 And 2011, and their coherence with four burnt area products (MCD45A1, MCD64A1, Fire_CCI and GIO) for the overlapping period (2006 to 2008). Preliminary results show reasonable agreement with the inherent limitations of each product algorithm and sensor resolution.
Interplay of upper and lower motor neuron degeneration in amyotrophic lateral sclerosis.

PubMed

de Carvalho, Mamede; Poliakov, Artiom; Tavares, Cristiano; Swash, Michael

2017-11-01

We studied motor unit recruitment to test a new method to identify motor unit firing rate (FR) variability. We studied 68 ALS patients, with and without upper neuron signs (UMN) in lower limbs, 24 patients with primary lateral sclerosis (PLS), 13 patients with spinal cord lesion and 39 normal subjects. All recordings were made from tibialis anterior muscles of normal strength. Subjects performed a very slight contraction in order to activate 2 motor units in each recording. 5-7 motor unit pairs were recorded in each subject. Mean consecutive differences (MCD) were calculated for each pair of potentials. The mean MCD for each muscle was estimated as the mean from the total number of pairs recorded. Ap value<0.01 was accepted as significant. MCD of FR frequency was less in the subjects with spinal cord lesion and PLS. In addition, the FR frequency of the 1st motor unit in a pair of units was markedly reduced in PLS, and in subjects with spinal cord lesions. These results support a lower threshold and reduced FR fluctuation in spinal motor neurons of spastic patients. This method can be developed for detection of UMN lesions. Copyright © 2017 International Federation of Clinical Neurophysiology. Published by Elsevier B.V. All rights reserved.
A review of precipitation and temperature control on seedling emergence and establishment for ponderosa and lodgepole pine forest regeneration

USGS Publications Warehouse

Petrie, Matthew; Wildeman, A.M.; Bradford, John B.; Hubbard, R.M.; Lauenroth, W.K.

2016-01-01

The persistence of ponderosa pine and lodgepole pine forests in the 21st century depends to a large extent on how seedling emergence and establishment are influenced by driving climate and environmental variables, which largely govern forest regeneration. We surveyed the literature, and identified 96 publications that reported data on dependent variables of seedling emergence and/or establishment and one or more independent variables of air temperature, soil temperature, precipitation and moisture availability. Our review suggests that seedling emergence and establishment for both species is highest at intermediate temperatures (20 to 25 °C), and higher precipitation and higher moisture availability support a higher percentage of seedling emergence and establishment at daily, monthly and annual timescales. We found that ponderosa pine seedlings may be more sensitive to temperature fluctuations whereas lodgepole pine seedlings may be more sensitive to moisture fluctuations. In a changing climate, increasing temperatures and declining moisture availability may hinder forest persistence by limiting seedling processes. Yet, only 23 studies in our review investigated the effects of driving climate and environmental variables directly. Furthermore, 74 studies occurred in a laboratory or greenhouse, which do not often replicate the conditions experienced by tree seedlings in a field setting. It is therefore difficult to provide strong conclusions on how sensitive emergence and establishment in ponderosa and lodgepole pine are to these specific driving variables, or to investigate their potential aggregate effects. Thus, the effects of many driving variables on seedling processes remain largely inconclusive. Our review stresses the need for additional field and laboratory studies to better elucidate the effects of driving climate and environmental variables on seedling emergence and establishment for ponderosa and lodgepole pine.
Spatial variability of surface temperature as related to cropping practice with implications for irrigation management

NASA Technical Reports Server (NTRS)

Hatfield, J. L.; Millard, J. P.; Reginato, R. J.; Jackson, R. D.; Idso, S. B.; Pinter, P. J., Jr.; Goettelman, R. C.

1980-01-01

Crop stress measured using thermal infrared emission is evaluated with the stress-degree-day (SDD) concept. Throughout the season, the accumulation of SDD during the reproductive stage of growth is inversely related to yield. This relationship is shown for durum wheat, hard red winter wheat, barley, grain sorghum and soybeans. It is noted that SDD can be used to schedule irrigations for maximizing yields and for applying remotely sensed data to management of water resources. An airborne flight with a thermal-IR scanner was used to examine the variability in temperature that may exist from one field to another and to determine realistic within-field temperature variations. It was found that the airborne and the ground-based data agreed very well and that there was less variability in the fields that were completely covered with crops than those of bare soil.
Compact variable-temperature scanning force microscope.

PubMed

Chuang, Tien-Ming; de Lozanne, Alex

2007-05-01

A compact design for a cryogenic variable-temperature scanning force microscope using a fiber-optic interferometer to measure cantilever deflection is presented. The tip-sample coarse approach and the lateral tip positioning are performed by piezoelectric positioners in situ. The microscope has been operated at temperatures between 6 and 300 K. It is designed to fit into an 8 T superconducting magnet with the field applied in the out-of-plane direction. The results of scanning in various modes are demonstrated, showing contrast based on magnetic field gradients or surface potentials.
Modern aspects of nonlinear convection and magnetic field in flow of thixotropic nanofluid over a nonlinear stretching sheet with variable thickness

NASA Astrophysics Data System (ADS)

Hayat, Tasawar; Qayyum, Sajid; Alsaedi, Ahmed; Ahmad, Bashir

2018-05-01

Main objective of present analysis is to study the magnetohydrodynamic (MHD) nonlinear convective flow of thixotropic nanofluid. Flow is due to nonlinear stretching surface with variable thickness. Nonlinear thermal radiation and heat generation/absorption are utilized in the energy expression. Convective conditions and zero mass flux at sheet are considered. Intention in present analysis is to develop a model for nanomaterial comprising Brownian motion and thermophoresis phenomena. Appropriate transformations are implemented for the conversion of partial differential systems into a sets of ordinary differential equations. The transformed expressions have been scrutinized through homotopic algorithm. Behavior of various sundry variables on velocity, temperature, nanoparticle concentration, skin friction coefficient and local Nusselt number are displayed through graphs. It is concluded that qualitative behaviors of temperature and thermal layer thickness are similar for radiation and temperature ratio variables. Moreover an enhancement in heat generation/absorption show rise to thermal field.
Variable temperature, variable-gap Otto prism coupler for use in a vacuum environment

NASA Astrophysics Data System (ADS)

Cairns, G. F.; O'Prey, S. M.; Dawson, P.

2000-11-01

The field of surface polariton physics really took off with the prism coupling techniques developed by Kretschmann and Raether, and by Otto. This article reports on the construction and operation of a rotatable, in vacuo, variable temperature, Otto coupler with a coupling gap that can be varied by remote control. The specific design attributes of the system offer additional advantages to those of standard Otto systems of (i) temperature variation (ambient to 85 K), and (ii) the use of a valuable, additional reference point, namely the gap-independent reflectance at the Brewster angle at any given, fixed temperature. The instrument is placed firmly in a historical context of developments in the field. The efficacy of the coupler is demonstrated by sample attenuated total reflectance results on films of platinum, niobium, and yttrium barium copper oxide and on aluminum/gallium arsenide (Al/GaAs) Schottky diode structures.
Atmospheric QBO and ENSO indices with high vertical resolution from GNSS radio occultation temperature measurements

NASA Astrophysics Data System (ADS)

Wilhelmsen, Hallgeir; Ladstädter, Florian; Scherllin-Pirscher, Barbara; Steiner, Andrea K.

2018-03-01

We provide atmospheric temperature variability indices for the tropical troposphere and stratosphere based on global navigation satellite system (GNSS) radio occultation (RO) temperature measurements. By exploiting the high vertical resolution and the uniform distribution of the GNSS RO temperature soundings we introduce two approaches, both based on an empirical orthogonal function (EOF) analysis. The first method utilizes the whole vertical and horizontal RO temperature field from 30° S to 30° N and from 2 to 35 km altitude. The resulting indices, the leading principal components, resemble the well-known patterns of the Quasi-Biennial Oscillation (QBO) and the El Niño-Southern Oscillation (ENSO) in the tropics. They provide some information on the vertical structure; however, they are not vertically resolved. The second method applies the EOF analysis on each altitude level separately and the resulting indices contain information on the horizontal variability at each densely available altitude level. They capture more variability than the indices from the first method and present a mixture of all variability modes contributing at the respective altitude level, including the QBO and ENSO. Compared to commonly used variability indices from QBO winds or ENSO sea surface temperature, these new indices cover the vertical details of the atmospheric variability. Using them as proxies for temperature variability is also of advantage because there is no further need to account for response time lags. Atmospheric variability indices as novel products from RO are expected to be of great benefit for studies on atmospheric dynamics and variability, for climate trend analysis, as well as for climate model evaluation.
Sub-seasonal temperature variability in the tropical upper troposphere and lower stratosphere observed with GPS radio occultation

NASA Astrophysics Data System (ADS)

Scherllin-Pirscher, Barbara; Randel, William J.; Kim, Joowan

2017-04-01

We investigate sub-seasonal temperature variability in the tropical upper troposphere and lower stratosphere (UTLS) region using daily gridded fields of GPS radio occultation measurements. The unprecedented vertical resolution (from about 100 m in the troposphere to about 1.5 km in the stratosphere) and high accuracy and precision (0.7 K to 1 K between 8 km and 25 km) make these data ideal for characterizing temperature oscillations with short vertical wavelengths. Long-term behavior of sub-seasonal temperature variability is investigated using the entire RO record from January 2002 to December 2014 (13 years of data). Transient sub-seasonal waves including eastward-propagating Kelvin waves (isolated with space-time spectral analysis) dominate large-scale zonal temperature variability in the tropical tropopause region and in the lower stratosphere. Above 20 km, Kelvin waves are strongly modulated by the quasi-biennial oscillation (QBO). Enhanced wave activity can be found during the westerly shear phase of the QBO. In the tropical tropopause region, however, sub-seasonal waves are highly transient in time. Several peaks of Kelvin-wave activity coincide with short-term fluctuations in tropospheric deep convection, but other episodes are not evidently related. Also, there are no obvious relationships with zonal winds or stability fields near the tropical tropopause. Further investigations of convective forcing and atmospheric background conditions along the waves' trajectories are needed to better understand sub-seasonal temperature variability near the tropopause. For more details, see Scherllin-Pirscher, B., Randel, W. J., and Kim, J.: Tropical temperature variability and Kelvin-wave activity in the UTLS from GPS RO measurements, Atmos. Chem. Phys., 17, 793-806, doi:10.5194/acp-17-793-2017, 2017. http://www.atmos-chem-phys.net/17/793/2017/acp-17-793-2017.html
Field study and simulation of diurnal temperature effects on infiltration and variably saturated flow beneath an ephemeral stream

USGS Publications Warehouse

Dudek Ronan, Anne; Prudic, David E.; Thodal, Carl E.; Constantz, Jim

1998-01-01

Two experiments were performed to investigate flow beneath an ephemeral stream and to estimate streambed infiltration rates. Discharge and stream-area measurements were used to determine infiltration rates. Stream and subsurface temperatures were used to interpret subsurface flow through variably saturated sediments beneath the stream. Spatial variations in subsurface temperatures suggest that flow beneath the streambed is dependent on the orientation of the stream in the canyon and the layering of the sediments. Streamflow and infiltration rates vary diurnally: Streamflow is lowest in late afternoon when stream temperature is greatest and highest in early morning when stream temperature is least. The lower afternoon Streamflow is attributed to increased infiltration rates; evapotranspiration is insufficient to account for the decreased Streamflow. The increased infiltration rates are attributed to viscosity effects on hydraulic conductivity from increased stream temperatures. The first set of field data was used to calibrate a two-dimensional variably saturated flow model that includes heat transport. The model was calibrated to (1) temperature fluctuations in the subsurface and (2) infiltration rates determined from measured Streamflow losses. The second set of field data was to evaluate the ability to predict infiltration rates on the basis of temperature measurements alone. Results indicate that the variably saturated subsurface flow depends on downcanyon layering of the sediments. They also support the field observations in indicating that diurnal changes in infiltration can be explained by temperature dependence of hydraulic conductivity. Over the range of temperatures and flows monitored, diurnal stream temperature changes can be used to estimate streambed infiltration rates. It is often impractical to maintain equipment for determining infiltration rates by traditional means; however, once a model is calibrated using both infiltration and temperature data, only relatively inexpensive temperature monitoring can later yield infiltration rates that are within the correct order of magnitude.
Capture and release of cells using a temperature-responsive surface that immobilizes an antibody through DNA duplex formation.

PubMed

Kimura, Tsuyoshi; Nakamura, Naoko; Umeda, Kanji; Hashimoto, Yoshihide; Kishida, Akio

We synthesized a temperature-responsive surface that immobilized an antibody via DNA duplex formation for selective capture and release of target cells. Polyethylene films were modified by grafting poly(N-isopropylacrylamide-co-acrylic acid) (P(NIPAAm-co-AAc)), which were prepared at various ratios of NIPAAm/AAc. The increased hydrophilicity of P(NIPAAm-co-PAA) film with decreased temperature was confirmed by water contact angle measurement. Single strand DNA (20mer) was chemically immobilized on the surface and then antibody (anti-mouse CD45, mCD45) modified with the complementary single strand DNA was immobilized on the surface through DNA duplex formation. The mCD45 antibody immobilization was confirmed by immunostaining. HeLa cells (mCD45 negative) and mouse bone marrow (BM) cells (mCD45 positive) were adhered on the surfaces at 37 °C. Although HeLa cells were detached by 4 °C incubation, BM cells were still adhered on the surface and then the adhered cells were released by DNase treatment. From these results, it was suggested that cells could be selectively captured and collected by using a film having surface that immobilizes an antibody via DNA duplex formation.
Development of a temperature-variable magnetic resonance imaging system using a 1.0T yokeless permanent magnet.

PubMed

Terada, Y; Tamada, D; Kose, K

2011-10-01

A temperature variable magnetic resonance imaging (MRI) system has been developed using a 1.0 T permanent magnet. A permanent magnet, gradient coils, radiofrequency coil, and shim coil were installed in a temperature variable thermostatic bath. First, the variation in the magnetic field inhomogeneity with temperature was measured. The inhomogeneity has a specific spatial symmetry, which scales linearly with temperature, and a single-channel shim coil was designed to compensate for the inhomogeneity. The inhomogeneity was drastically reduced by shimming over a wide range of temperature from -5°C to 45°C. MR images of an okra pod acquired at different temperatures demonstrated the high potential of the system for visualizing thermally sensitive properties. Copyright © 2011 Elsevier Inc. All rights reserved.
Mechanisms of double stratification and magnetic field in flow of third grade fluid over a slendering stretching surface with variable thermal conductivity

NASA Astrophysics Data System (ADS)

Hayat, Tasawar; Qayyum, Sajid; Alsaedi, Ahmed; Ahmad, Bashir

2018-03-01

This article addresses the magnetohydrodynamic (MHD) stagnation point flow of third grade fluid towards a nonlinear stretching sheet. Energy expression is based through involvement of variable thermal conductivity. Heat and mass transfer aspects are described within the frame of double stratification effects. Boundary layer partial differential systems are deduced. Governing systems are then converted into ordinary differential systems by invoking appropriate variables. The transformed expressions are solved through homotopic technique. Impact of embedded variables on velocity, thermal and concentration fields are displayed and argued. Numerical computations are presented to obtain the results of skin friction coefficient and local Nusselt and Sherwood numbers. It is revealed that larger values of magnetic parameter reduces the velocity field while reverse situation is noticed due to wall thickness variable. Temperature field and local Nusselt number are quite reverse for heat generation/absorption parameter. Moreover qualitative behaviors of concentration field and local Sherwood number are similar for solutal stratification parameter.
Sonic Hedgehog mutations are not a common cause of congenital hypopituitarism in the absence of complex midline cerebral defects.

PubMed

Paulo, Sabrina Soares; Fernandes-Rosa, Fábio L; Turatti, Wendy; Coeli-Lacchini, Fernanda Borchers; Martinelli, Carlos E; Nakiri, Guilherme S; Moreira, Ayrton C; Santos, Antônio C; de Castro, Margaret; Antonini, Sonir R

2015-04-01

Sonic Hedgehog (SHH) and GLI2, an obligatory mediator of SHH signal transduction, are holoprosencephaly (HPE)-associated genes essential in pituitary formation. GLI2 variants have been found in patients with congenital hypopituitarism without complex midline cerebral defects (MCD). However, data on the occurrence of SHH mutations in these patients are limited. We screened for SHH and GLI2 mutations or copy number variations (CNV) in patients with congenital hypopituitarism without MCD or with variable degrees of MCD. Detailed data on clinical, laboratory and neuroimaging findings of 115 patients presenting with congenital hypopituitarism without MCD, septo-optic dysplasia or HPE were analysed. The SHH and GLI2 genes were directly sequenced, and the presence of gene CNV was analysed by multiplex ligation-dependent probe amplification (MLPA). Anterior pituitary deficiency was found in 74% and 53% of patients with SOD or HPE, respectively. Diabetes insipidus was common in patients with HPE (47%) but infrequent in patients with congenital hypopituitarism or SOD (7% and 8%, respectively). A single heterozygous nonsense SHH mutation (p.Tyr175Ter) was found in a patient presenting with hypopituitarism and alobar HPE. No other SHH mutations or CNV were found. Nine GLI2 variations (8 missense and 1 frameshift) including a homozygous and a compound heterozygous variation were found in patients with congenital hypopituitarism or SOD, but not in HPE patients. No GLI2 CNV were found. SHH mutations or copy number variations are not a common cause of congenital hypopituitarism in patients without complex midline cerebral defects. GLI2 variants are found in some patients with congenital hypopituitarism without complex midline cerebral defects or septo-optic dysplasia. However, functional analyses of these variants are needed to strengthen genotype-phenotype relationship. © 2014 John Wiley & Sons Ltd.
Magnetic circular dichroism of CdTe nanoparticles

NASA Astrophysics Data System (ADS)

Malakhovskii, A. V.; Sokolov, A. E.; Tsipotan, A. S.; Zharkov, S. M.; Zabluda, V. N.

2018-04-01

Magnetic circular dichroism (MCD) of water-soluble CdTe nanoparticles was observed in the visible spectral range for the first time. Diameter of nanoparticles varied from 2.3 to 4.5 nm. Absorption and photoluminescence spectra were also recorded. Absorption line at 19400 cm-1 and luminescent line at 18200 cm-1 were observed. Splitting of value 960 cm-1 was revealed in the MCD spectrum. Approximately the same splitting was extracted from the absorption spectrum. The MCD was identified as the temperature independent paramagnetic mixing effect. Nature of the absorption line and of its splitting are discussed.
Infrared-temperature variability in a large agricultural field

NASA Technical Reports Server (NTRS)

Millard, J. P.; Goettelman, R. C.; Leroy, M. J.

1981-01-01

Dunnigan Agro-Meteorological Experiment airborne thermal scanner images of a large varying-terrain barley field are acquired and analyzed. Temperature variability that may occur within instantaneous fields of view (IFOV) is defined (coefficient of variation: standard deviation/mean temperature in degrees C), and the percentage of the area within various IFOV's within + or - 1, 2, 3, and 5 degrees of the mean is determined. With the exception of very rugged terrain, over 80% of the area within 4, 16, 65 and 258 ha cells was at temperatures within + or - 3 C of the mean cell temperature. Remote measurements of field temperature appeared to be slightly influenced by pixel size in the range 4 ha to 259 ha, and the area percentage within any pixel which contributes within + or - 1, 2, 3, and 5 degrees C of the mean, is nominally the same. In conclusion, no great advantage is found in utilizing a small IFOV instead of a large one for remote sensing of crop temperature.
Sea Surface Temperature and Ocean Color Variability in the South China Sea

NASA Astrophysics Data System (ADS)

Conaty, A. P.

2001-12-01

The South China Sea is a marginal sea in the Southeast Asian region whose surface circulation is driven by monsoons and whose surface currents have complex seasonal patterns. Its rich natural resources and strategic location have made its small islands areas of political dispute among the neighboring nations. This study aims to show the seasonal and interannual variability of sea surface temperature and ocean color in South China Sea. It makes use of NOAA's Advanced Very High Resolution Radiometer (AVHRR) satellite data sets on sea surface temperature for the period 1981-2000 and NASA's Nimbus-7 Coastal Zone Color Scanner (CZCS) and Sea-viewing Wide Field-of-view Sensor (SeaWiFS) satellite data sets on pigment concentration (ocean color) for the period 1981-1996 and 1997-2000, respectively. Transect lines were drawn along several potential hotspot areas to show the variability in sea surface temperature and pigment concentration through time. In-situ data on sea surface temperature along South China Sea were likewise plotted to see the variability with time. Higher seasonal variability in sea surface temperature was seen at higher latitudes. Interannual variability was within 1-3 Kelvin. In most areas, pigment concentration was higher during northern hemisphere winter and autumn, after the monsoon rains, with a maximum of 30 milligrams per cubic meter.

Cross-scale modeling of surface temperature and tree seedling establishment inmountain landscapes

USGS Publications Warehouse

Dingman, John; Sweet, Lynn C.; McCullough, Ian M.; Davis, Frank W.; Flint, Alan L.; Franklin, Janet; Flint, Lorraine E.

2013-01-01

Abstract: Introduction: Estimating surface temperature from above-ground field measurements is important for understanding the complex landscape patterns of plant seedling survival and establishment, processes which occur at heights of only several centimeters. Currently, future climate models predict temperature at 2 m above ground, leaving ground-surface microclimate not well characterized. Methods: Using a network of field temperature sensors and climate models, a ground-surface temperature method was used to estimate microclimate variability of minimum and maximum temperature. Temperature lapse rates were derived from field temperature sensors and distributed across the landscape capturing differences in solar radiation and cold air drainages modeled at a 30-m spatial resolution. Results: The surface temperature estimation method used for this analysis successfully estimated minimum surface temperatures on north-facing, south-facing, valley, and ridgeline topographic settings, and when compared to measured temperatures yielded an R2 of 0.88, 0.80, 0.88, and 0.80, respectively. Maximum surface temperatures generally had slightly more spatial variability than minimum surface temperatures, resulting in R2 values of 0.86, 0.77, 0.72, and 0.79 for north-facing, south-facing, valley, and ridgeline topographic settings. Quasi-Poisson regressions predicting recruitment of Quercus kelloggii (black oak) seedlings from temperature variables were significantly improved using these estimates of surface temperature compared to air temperature modeled at 2 m. Conclusion: Predicting minimum and maximum ground-surface temperatures using a downscaled climate model coupled with temperature lapse rates estimated from field measurements provides a method for modeling temperature effects on plant recruitment. Such methods could be applied to improve projections of species’ range shifts under climate change. Areas of complex topography can provide intricate microclimates that may allow species to redistribute locally as climate changes.
Response of sap flow to environmental factors in the headwater catchment of Miyun Reservoir in subhumid North China

NASA Astrophysics Data System (ADS)

Tie, Qiang; Hu, Hongchang; Tian, Fuqiang; Liu, Yaping; Xu, Ran

2015-04-01

Since the headwater catchment of Miyun Reservoir is the main drinking water conservation area of Beijing, its water cycle is of importance for the regional water resource. Transpiration is an important component of water cycle, which can be estimated by sap flow. In this study, the dynamics of sap flow and its response to environmental factors and relationship with leaf area index (LAI) were analyzed. The field study was conducted in the Xitaizi Experimental Catchment, located in the headwater catchment of Miyun Reservoir in subhumid North China. The Aspen (Populus davidiana) and Epinette (Larix gmelinii) are the two dominant tree species. Sap flow in 15 Aspen (Populus davidiana) trees was monitored using thermal dissipation probes (TDP) during the growing season of 2013 and 2014, and sap flow in another 3 Epinette (Larix gmelinii) trees was also monitored during September and October in 2014 for comparative analysis. Physiological and biometric parameters of the selected trees and the environmental factors, including meteorological variables, soil moisture content and groundwater table depth were measured. Vapor pressure deficit (VPD), variable of transpiration (VT) and reference crop evapotranspiration (ET0) were calculated using the measured environmental factors. The LAI, which is used to characterize phenophase, was calculated using the Moderate Resolution Imaging Spectroradiometer (MODIS) LAI product (MCD15A3). Correlation analysis for daily sap flow and air temperature, relative humidity, precipitation, wind speed, solar radiation, VPD, VT and ET0 under different soil moisture and groundwater table depth conditions was performed. Diurnal course and hysteresis of sap flow were analyzed as a function of air temperature, solar radiation, VPD and VT on the typical sunny, cloudy and rainy days under different soil moisture conditions. Correlation analysis between daily sap flow and LAI showed that LAI and phenophase significantly influence sap flow and restrict the maximum value of sap flow. The sap flow and its response to environmental factors were compared between Aspen and Epinette. The result could make contributions to improve empirical transpiration modeling for efficient water resource management in the headwater catchment of subhumid region.
Soil Temperature Variability in Complex Terrain measured using Distributed a Fiber-Optic Distributed Temperature Sensing

NASA Astrophysics Data System (ADS)

Seyfried, M. S.; Link, T. E.

2013-12-01

Soil temperature (Ts) exerts critical environmental controls on hydrologic and biogeochemical processes. Rates of carbon cycling, mineral weathering, infiltration and snow melt are all influenced by Ts. Although broadly reflective of the climate, Ts is sensitive to local variations in cover (vegetative, litter, snow), topography (slope, aspect, position), and soil properties (texture, water content), resulting in a spatially and temporally complex distribution of Ts across the landscape. Understanding and quantifying the processes controlled by Ts requires an understanding of that distribution. Relatively few spatially distributed field Ts data exist, partly because traditional Ts data are point measurements. A relatively new technology, fiber optic distributed temperature system (FO-DTS), has the potential to provide such data but has not been rigorously evaluated in the context of remote, long term field research. We installed FO-DTS in a small experimental watershed in the Reynolds Creek Experimental Watershed (RCEW) in the Owyhee Mountains of SW Idaho. The watershed is characterized by complex terrain and a seasonal snow cover. Our objectives are to: (i) evaluate the applicability of fiber optic DTS to remote field environments and (ii) to describe the spatial and temporal variability of soil temperature in complex terrain influenced by a variable snow cover. We installed fiber optic cable at a depth of 10 cm in contrasting snow accumulation and topographic environments and monitored temperature along 750 m with DTS. We found that the DTS can provide accurate Ts data (+/- .4°C) that resolves Ts changes of about 0.03°C at a spatial scale of 1 m with occasional calibration under conditions with an ambient temperature range of 50°C. We note that there are site-specific limitations related cable installation and destruction by local fauna. The FO-DTS provide unique insight into the spatial and temporal variability of Ts in a landscape. We found strong seasonal trends in Ts variability controlled by snow cover and solar radiation as modified by topography. During periods of spatially continuous snow cover Ts was practically homogeneous throughout. In the absence of snow cover, Ts is highly variable, with most of the variability attributable to different topographic units defined by slope and aspect. During transition periods when snow melts out, Ts is highly variable within the watershed and within topographic units. The importance of accounting for these relatively small scale effects is underscored by the fact that the overall range of Ts in study area 600 m long is similar to that of the much large RCEW with 900 m elevation gradient.
Stagnation point flow of viscoelastic nanomaterial over a stretched surface

NASA Astrophysics Data System (ADS)

Hayat, T.; Kiyani, M. Z.; Ahmad, I.; Khan, M. Ijaz; Alsaedi, A.

2018-06-01

Present communication aims to discuss magnetohydrodynamic (MHD) stagnation point flow of Jeffrey nanofluid by a stretching cylinder. Modeling is based upon Brownian motion, thermophoresis, thermal radiation and heat generation. Problem is attempted by using (HAM). Residual errors for h-curves are plotted. Convergent solutions for velocity, temperature and concentration are obtained. Skin friction coefficient, local Nusselt number and Sherwood number are studied. It is examined that velocity field decays in the presence of higher estimation of magnetic variable. Furthermore temperature and concentration fields are enhanced for larger magnetic variable.
North Atlantic storm track variability and its association to the North Atlantic oscillation and climate variability of northern Europe

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rogers, J.C.

The primary mode of North Atlantic track variability is identified using rotated principal component analysis (RPCA) on monthly fields of root-mean-squares of daily high-pass filtered (2-8-day periods) sea level pressures (SLP) for winters (December-February) 1900-92. It is examined in terms of its association with (1) monthly mean SLP fields, (2) regional low-frequency teleconnections, and (3) the seesaw in winter temperatures between Greenland and northern Europe. 32 refs., 9 figs.
Respiratory alkalosis and primary hypocapnia in Labrador Retrievers participating in field trials in high-ambient-temperature conditions.

PubMed

Steiss, Janet E; Wright, James C

2008-10-01

To determine whether Labrador Retrievers participating in field trials develop respiratory alkalosis and hypocapnia primarily in conditions of high ambient temperatures. 16 Labrador Retrievers. At each of 5 field trials, 5 to 10 dogs were monitored during a test (retrieval of birds over a variable distance on land [1,076 to 2,200 m]; 36 assessments); ambient temperatures ranged from 2.2 degrees to 29.4 degrees C. For each dog, rectal temperature was measured and a venous blood sample was collected in a heparinized syringe within 5 minutes of test completion. Blood samples were analyzed on site for Hct; pH; sodium, potassium, ionized calcium, glucose, lactate, bicarbonate, and total CO2 concentrations; and values of PvO2 and PvCO2. Scatterplots of each variable versus ambient temperature were reviewed. Regression analysis was used to evaluate the effect of ambient temperature (< or = 21 degrees C and > 21 degrees C) on each variable. Compared with findings at ambient temperatures < or = 21 degrees C, venous blood pH was increased (mean, 7.521 vs 7.349) and PvCO2 was decreased (mean, 17.8 vs 29.3 mm Hg) at temperatures > 21 degrees C; rectal temperature did not differ. Two dogs developed signs of heat stress in 1 test at an ambient temperature of 29 degrees C; their rectal temperatures were higher and PvCO2 values were lower than findings in other dogs. When running distances frequently encountered at field trials, healthy Labrador Retrievers developed hyperthermia regardless of ambient temperature. Dogs developed respiratory alkalosis and hypocapnia at ambient temperatures > 21 degrees C.
Generalized Scaling and the Master Variable for Brownian Magnetic Nanoparticle Dynamics

PubMed Central

Reeves, Daniel B.; Shi, Yipeng; Weaver, John B.

2016-01-01

Understanding the dynamics of magnetic particles can help to advance several biomedical nanotechnologies. Previously, scaling relationships have been used in magnetic spectroscopy of nanoparticle Brownian motion (MSB) to measure biologically relevant properties (e.g., temperature, viscosity, bound state) surrounding nanoparticles in vivo. Those scaling relationships can be generalized with the introduction of a master variable found from non-dimensionalizing the dynamical Langevin equation. The variable encapsulates the dynamical variables of the surroundings and additionally includes the particles’ size distribution and moment and the applied field’s amplitude and frequency. From an applied perspective, the master variable allows tuning to an optimal MSB biosensing sensitivity range by manipulating both frequency and field amplitude. Calculation of magnetization harmonics in an oscillating applied field is also possible with an approximate closed-form solution in terms of the master variable and a single free parameter. PMID:26959493
Multilayered micro/nanocrystalline CVD diamond coatings for biotribology =

NASA Astrophysics Data System (ADS)

Salgueiredo, Ermelinda da Conceicao Portela

In the present work multilayered micro/nanocrystalline (MCD/NCD) diamond coatings were developed by Hot Filament Chemical Vapour Deposition (HFCVD). The aim was to minimize the surface roughness with a top NCD layer, to maximize adhesion onto the Si3N4 ceramic substrates with a starting MCD coating and to improve the mechanical resistance by the presence of MCD/NCD interfaces in these composite coatings. This set of features assures high wear resistance and low friction coefficients which, combined to diamond biocompatibility, set this material as ideal for biotribological applications. The deposition parameters of MCD were optimized using the Taguchi method, and two varieties of NCD were used: NCD-1, grown in a methane rich gas phase, and NCD-2 where a third gas, Argon, was added to the gas mixture. The best combination of surface pre-treatments in the Si3N4 substrates is obtained by polishing the substrates with a 15 mum diamond slurry, further dry etching with CF4 plasma for 10 minutes and final ultrasonic seeding in a diamond powder suspension in ethanol for 1 hour. The interfaces of the multilayered CVD diamond films were characterized with high detail using HRTEM, STEM-EDX and EELS. The results show that at the transition from MCD to NCD a thin precursor graphitic film is formed. On the contrary, the transition of the NCD to MCD grade is free of carbon structures other than diamond, as a result of the richer atomic hydrogen content and of the higher substrate temperature for MCD deposition. At those transitions, WC nanoparticles were found due to contamination from the filament, being also present at the first interface of the MCD layer with the silicon nitride substrate. In order to study the adhesion and mechanical resistance of the diamond coatings, indentation and particle jet blasting tests were conducted, as well as tribological experiments with homologous pairs. Indentation tests proved the superior behaviour of the multilayered coatings that attained a load of 800 N without delamination, when compared to the mono and bilayered ones. The multilayered diamond coatings also reveal the best solid particle erosion resistance, due to the MCD/NCD interfaces that act as crack deflectors. These results were confirmed by an analytical model on the stress field distribution based on the von Mises criterion. Regarding the tribological testing under dry sliding, multilayered coatings also exhibit the highest critical load values (200N for Multilayers with NCD-2). Low friction coefficient values in the range mu=0.02- 0.09 and wear coefficient values in the order of 10. -7 mm3 N-1 m-1 were obtained for the ball and flat specimensindicating a mild wear regime. Under lubrication with physiological fluids (HBSS e FBS), lower wear coefficient values 10. -9-10. -8 mm3 N-1 m-1) wereachieved, governed by the initial surface roughness and the effective contact pressure.
The effect of pyramiding Phytophthora infestans resistance genes RPi-mcd1 and RPi-ber in potato

PubMed Central

Tan, M. Y. Adillah; Hutten, Ronald C. B.; Visser, Richard G. F.

2010-01-01

Despite efforts to control late blight in potatoes by introducing Rpi-genes from wild species into cultivated potato, there are still concerns regarding the durability and level of resistance. Pyramiding Rpi-genes can be a solution to increase both durability and level of resistance. In this study, two resistance genes, RPi-mcd1 and RPi-ber, introgressed from the wild tuber-bearing potato species Solanum microdontum and S. berthaultii were combined in a diploid S. tuberosum population. Individual genotypes from this population were classified after four groups, carrying no Rpi-gene, with only RPi-mcd1, with only RPi-ber, and a group with the pyramided RPi-mcd1 and RPi-ber by means of tightly linked molecular markers. The levels of resistance between the groups were compared in a field experiment in 2007. The group with RPi-mcd1 showed a significant delay to reach 50% infection of the leaf area of 3 days. The group with RPi-ber showed a delay of 3 weeks. The resistance level in the pyramid group suggested an additive effect of RPi-mcd1 with RPi-ber. This suggests that potato breeding can benefit from combining individual Rpi-genes, irrespective of the weak effect of RPi-mcd1 or the strong effect of RPi-ber. PMID:20204320
Greenland ice sheet albedo variability and feedback: 2000-2015

NASA Astrophysics Data System (ADS)

Box, J. E.; van As, D.; Fausto, R. S.; Mottram, R.; Langen, P. P.; Steffen, K.

2015-12-01

Absorbed solar irradiance represents the dominant source of surface melt energy for Greenland ice. Surface melting has increased as part of a positive feedback amplifier due to surface darkening. The 16 most recent summers of observations from the NASA MODIS sensor indicate a darkening exceeding 6% in July when most melting occurs. Without the darkening, the increase in surface melting would be roughly half as large. A minority of the albedo decline signal may be from sensor degradation. So, in this study, MOD10A1 and MCD43 albedo products from MODIS are evaluated for sensor degradation and anisotropic reflectance errors. Errors are minimized through calibration to GC-Net and PROMICE Greenland snow and ice ground control data. The seasonal and spatial variability in Greenland snow and ice albedo over a 16 year period is presented, including quantifying changing absorbed solar irradiance and melt enhancement due to albedo feedback using the DMI HIRHAM5 5 km model.
Observed Decrease of North American Winter Temperature Variability

NASA Astrophysics Data System (ADS)

Rhines, A. N.; Tingley, M.; McKinnon, K. A.; Huybers, P. J.

2015-12-01

There is considerable interest in determining whether temperature variability has changed in recent decades. Model ensembles project that extratropical land temperature variance will detectably decrease by 2070. We use quantile regression of station observations to show that decreasing variability is already robustly detectable for North American winter during 1979--2014. Pointwise trends from GHCND stations are mapped into a continuous spatial field using thin-plate spline regression, resolving small-scales while providing uncertainties accounting for spatial covariance and varying station density. We find that variability of daily temperatures, as measured by the difference between the 95th and 5th percentiles, has decreased markedly in winter for both daily minima and maxima. Composites indicate that the reduced spread of winter temperatures primarily results from Arctic amplification decreasing the meridional temperature gradient. Greater observed warming in the 5th relative to the 95th percentile stems from asymmetric effects of advection during cold versus warm days; cold air advection is generally from northerly regions that have experienced greater warming than western or southwestern regions that are generally sourced during warm days.
The variability of atmospheric equivalent temperature for radar altimeter range correction

NASA Technical Reports Server (NTRS)

Liu, W. Timothy; Mock, Donald

1990-01-01

Two sets of data were used to test the validity of the presently used approximation for radar altimeter range correction due to atmospheric water vapor. The approximation includes an assumption of constant atmospheric equivalent temperature. The first data set includes monthly, three-dimensional, gridded temperature and humidity fields over global oceans for a 10-year period, and the second is comprised of daily or semidaily rawinsonde data at 17 island stations for a 7-year period. It is found that the standard method underestimates the variability of the equivalent temperature, and the approximation could introduce errors of 2 cm for monthly means. The equivalent temperature is found to have a strong meridional gradient, and the highest temporal variabilities are found over western boundary currents. The study affirms that the atmospheric water vapor is a good predictor for both the equivalent temperature and the range correction. A relation is proposed to reduce the error.
Modelling temporal and large-scale spatial variability of soil respiration from soil water availability, temperature and vegetation productivity indices

NASA Astrophysics Data System (ADS)

Reichstein, M.; Rey, A.; Freibauer, A.; Tenhunen, J.; Valentini, R.; Soil Respiration Synthesis Team

2003-04-01

Field-chamber measurements of soil respiration from 17 different forest and shrubland sites in Europe and North America were summarized and analyzed with the goal to develop a model describing seasonal, inter-annual and spatial variability of soil respiration as affected by water availability, temperature and site properties. The analysis was performed at a daily and at a monthly time step. With the daily time step, the relative soil water content in the upper soil layer expressed as a fraction of field capacity was a good predictor of soil respiration at all sites. Among the site variables tested, those related to site productivity (e.g. leaf area index) correlated significantly with soil respiration, while carbon pool variables like standing biomass or the litter and soil carbon stocks did not show a clear relationship with soil respiration. Furthermore, it was evidenced that the effect of precipitation on soil respiration stretched beyond its direct effect via soil moisture. A general statistical non-linear regression model was developed to describe soil respiration as dependent on soil temperature, soil water content and site-specific maximum leaf area index. The model explained nearly two thirds of the temporal and inter-site variability of soil respiration with a mean absolute error of 0.82 µmol m-2 s-1. The parameterised model exhibits the following principal properties: 1) At a relative amount of upper-layer soil water of 16% of field capacity half-maximal soil respiration rates are reached. 2) The apparent temperature sensitivity of soil respiration measured as Q10 varies between 1 and 5 depending on soil temperature and water content. 3) Soil respiration under reference moisture and temperature conditions is linearly related to maximum site leaf area index. At a monthly time-scale we employed the approach by Raich et al. (2002, Global Change Biol. 8, 800-812) that used monthly precipitation and air temperature to globally predict soil respiration (T&P-model). While this model was able to explain some of the month-to-month variability of soil respiration, it failed to capture the inter-site variability, regardless whether the original or a new optimized model parameterization was used. In both cases, the residuals were strongly related to maximum site leaf area index. Thus, for a monthly time scale we developed a simple T&P&LAI-model that includes leaf area index as an additional predictor of soil respiration. This extended but still simple model performed nearly as well as the more detailed time-step model and explained 50 % of the overall and 65% of the site-to-site variability. Consequently, better estimates of globally distributed soil respiration should be obtained with the new model driven by satellite estimates of leaf area index.
Outcomes of Moral Case Deliberation - the development of an evaluation instrument for clinical ethics support (the Euro-MCD)

PubMed Central

2014-01-01

Background Clinical ethics support, in particular Moral Case Deliberation, aims to support health care providers to manage ethically difficult situations. However, there is a lack of evaluation instruments regarding outcomes of clinical ethics support in general and regarding Moral Case Deliberation (MCD) in particular. There also is a lack of clarity and consensuses regarding which MCD outcomes are beneficial. In addition, MCD outcomes might be context-sensitive. Against this background, there is a need for a standardised but flexible outcome evaluation instrument. The aim of this study was to develop a multi-contextual evaluation instrument measuring health care providers’ experiences and perceived importance of outcomes of Moral Case Deliberation. Methods A multi-item instrument for assessing outcomes of Moral Case Deliberation (MCD) was constructed through an iterative process, founded on a literature review and modified through a multistep review by ethicists and health care providers. The instrument measures perceived importance of outcomes before and after MCD, as well as experienced outcomes during MCD and in daily work. A purposeful sample of 86 European participants contributed to a Delphi panel and content validity testing. The Delphi panel (n = 13), consisting of ethicists and ethics researchers, participated in three Delphi-rounds. Health care providers (n = 73) participated in the content validity testing through ‘think-aloud’ interviews and a method using Content Validity Index. Results The development process resulted in the European Moral Case Deliberation Outcomes Instrument (Euro-MCD), which consists of two sections, one to be completed before a participant’s first MCD and the other after completing multiple MCDs. The instrument contains a few open-ended questions and 26 specific items with a corresponding rating/response scale representing various MCD outcomes. The items were categorised into the following six domains: Enhanced emotional support, Enhanced collaboration, Improved moral reflexivity, Improved moral attitude, Improvement on organizational level and Concrete results. Conclusions A tentative instrument has been developed that seems to cover main outcomes of Moral Case Deliberation. The next step will be to test the Euro-MCD in a field study. PMID:24712735
Outcomes of moral case deliberation--the development of an evaluation instrument for clinical ethics support (the Euro-MCD).

PubMed

Svantesson, Mia; Karlsson, Jan; Boitte, Pierre; Schildman, Jan; Dauwerse, Linda; Widdershoven, Guy; Pedersen, Reidar; Huisman, Martijn; Molewijk, Bert

2014-04-08

Clinical ethics support, in particular Moral Case Deliberation, aims to support health care providers to manage ethically difficult situations. However, there is a lack of evaluation instruments regarding outcomes of clinical ethics support in general and regarding Moral Case Deliberation (MCD) in particular. There also is a lack of clarity and consensuses regarding which MCD outcomes are beneficial. In addition, MCD outcomes might be context-sensitive. Against this background, there is a need for a standardised but flexible outcome evaluation instrument. The aim of this study was to develop a multi-contextual evaluation instrument measuring health care providers' experiences and perceived importance of outcomes of Moral Case Deliberation. A multi-item instrument for assessing outcomes of Moral Case Deliberation (MCD) was constructed through an iterative process, founded on a literature review and modified through a multistep review by ethicists and health care providers. The instrument measures perceived importance of outcomes before and after MCD, as well as experienced outcomes during MCD and in daily work. A purposeful sample of 86 European participants contributed to a Delphi panel and content validity testing. The Delphi panel (n = 13), consisting of ethicists and ethics researchers, participated in three Delphi-rounds. Health care providers (n = 73) participated in the content validity testing through 'think-aloud' interviews and a method using Content Validity Index. The development process resulted in the European Moral Case Deliberation Outcomes Instrument (Euro-MCD), which consists of two sections, one to be completed before a participant's first MCD and the other after completing multiple MCDs. The instrument contains a few open-ended questions and 26 specific items with a corresponding rating/response scale representing various MCD outcomes. The items were categorised into the following six domains: Enhanced emotional support, Enhanced collaboration, Improved moral reflexivity, Improved moral attitude, Improvement on organizational level and Concrete results. A tentative instrument has been developed that seems to cover main outcomes of Moral Case Deliberation. The next step will be to test the Euro-MCD in a field study.
Transport critical current measurement apparatus using liquid nitrogen cooled high-Tc superconducting magnet with variable temperature insert

NASA Astrophysics Data System (ADS)

Nishijima, G.; Kitaguchi, H.; Tshuchiya, Y.; Nishimura, T.; Kato, T.

2013-01-01

We have developed an apparatus to investigate transport critical current (Ic) as a function of magnetic field and temperature using only liquid nitrogen. The apparatus consists of a (Bi,Pb)2Sr2Ca2Cu3O10 (Bi-2223) superconducting magnet, an outer dewar, and a variable temperature insert (VTI). The magnet, which is operated in depressurized liquid nitrogen, generates magnetic field up to 1.26 T. The sample is also immersed in liquid nitrogen. The pressure in the VTI is controlled from 0.02 to 0.3 MPa, which corresponds to temperature ranging from 66 to 88 K. We have confirmed the long-term stable operation of the Bi-2223 magnet at 1 T. The temperature stability of the sample at high transport current was also demonstrated. The apparatus provides easy-operating Ic measurement environment for a high-Tc superconductor up to 500 A in magnetic fields up to 1 T and in temperatures ranging from 66 to 88 K.
TRUMP. Transient & S-State Temperature Distribution

DOE Office of Scientific and Technical Information (OSTI.GOV)

Elrod, D.C.; Turner, W.D.

1992-03-03

TRUMP solves a general nonlinear parabolic partial differential equation describing flow in various kinds of potential fields, such as fields of temperature, pressure, or electricity and magnetism; simultaneously, it will solve two additional equations representing, in thermal problems, heat production by decomposition of two reactants having rate constants with a general Arrhenius temperature dependence. Steady-state and transient flow in one, two, or three dimensions are considered in geometrical configurations having simple or complex shapes and structures. Problem parameters may vary with spatial position, time, or primary dependent variables, temperature, pressure, or field strength. Initial conditions may vary with spatial position,more » and among the criteria that may be specified for ending a problem are upper and lower limits on the size of the primary dependent variable, upper limits on the problem time or on the number of time-steps or on the computer time, and attainment of steady state.« less
Intercomparisons of nine sky brightness detectors.

PubMed

den Outer, Peter; Lolkema, Dorien; Haaima, Marty; van der Hoff, Rene; Spoelstra, Henk; Schmidt, Wim

2011-01-01

Nine Sky Quality Meters (SQMs) have been intercompared during a night time measurement campaign held in the Netherlands in April 2011. Since then the nine SQMs have been distributed across The Netherlands and form the Dutch network for monitoring night sky brightness. The goal of the intercomparison was to infer mutual calibration factors and obtain insight into the variability of the SQMs under different meteorological situations. An ensemble average is built from the individual measurements and used as a reference to infer the mutual calibration factors. Data required additional synchronization prior to the calibration determination, because the effect of moving clouds combined with small misalignments emerges as time jitter in the measurements. Initial scatter of the individual instruments lies between ±14%. Individual night time sums range from -16% to +20%. Intercalibration reduces this to 0.5%, and -7% to +9%, respectively. During the campaign the smallest luminance measured was 0.657 ± 0.003 mcd/m(2) on 12 April, and the largest value was 5.94 ± 0.03 mcd/m(2) on 2 April. During both occurrences interfering circumstances like snow cover or moonlight were absent.
Spin Exchange Interaction in Substituted Copper Phthalocyanine Crystalline Thin Films

NASA Astrophysics Data System (ADS)

Rawat, Naveen; Pan, Zhenwen; Lamarche, Cody J.; Wetherby, Anthony; Waterman, Rory; Tokumoto, Takahisa; Cherian, Judy G.; Headrick, Randall L.; McGill, Stephen A.; Furis, Madalina I.

2015-11-01

The origins of spin exchange in crystalline thin films of Copper Octabutoxy Phthalocyanine (Cu-OBPc) are investigated using Magnetic Circular Dichroism (MCD) spectroscopy. These studies are made possible by a solution deposition technique which produces highly ordered films with macroscopic grain sizes suitable for optical studies. For temperatures lower than 2 K, the contribution of a specific state in the valence band manifold originating from the hybridized lone pair in nitrogen orbitals of the Phthalocyanine ring, bears the Brillouin-like signature of an exchange interaction with the localized d-shell Cu spins. A comprehensive MCD spectral analysis coupled with a molecular field model of a σπ - d exchange analogous to sp-d interactions in Diluted Magnetic Semiconductors (DMS) renders an enhanced Zeeman splitting and a modified g-factor of -4 for the electrons that mediate the interaction. These studies define an experimental tool for identifying electronic states involved in spin-dependent exchange interactions in organic materials.
Spin Exchange Interaction in Substituted Copper Phthalocyanine Crystalline Thin Films

PubMed Central

Rawat, Naveen; Pan, Zhenwen; Lamarche, Cody J.; Wetherby, Anthony; Waterman, Rory; Tokumoto, Takahisa; Cherian, Judy G.; Headrick, Randall L.; McGill, Stephen A.; Furis, Madalina I.

2015-01-01

The origins of spin exchange in crystalline thin films of Copper Octabutoxy Phthalocyanine (Cu-OBPc) are investigated using Magnetic Circular Dichroism (MCD) spectroscopy. These studies are made possible by a solution deposition technique which produces highly ordered films with macroscopic grain sizes suitable for optical studies. For temperatures lower than 2 K, the contribution of a specific state in the valence band manifold originating from the hybridized lone pair in nitrogen orbitals of the Phthalocyanine ring, bears the Brillouin-like signature of an exchange interaction with the localized d-shell Cu spins. A comprehensive MCD spectral analysis coupled with a molecular field model of a σπ − d exchange analogous to sp-d interactions in Diluted Magnetic Semiconductors (DMS) renders an enhanced Zeeman splitting and a modified g-factor of −4 for the electrons that mediate the interaction. These studies define an experimental tool for identifying electronic states involved in spin-dependent exchange interactions in organic materials. PMID:26559337

Spin Exchange Interaction in Substituted Copper Phthalocyanine Crystalline Thin Films.

PubMed

Rawat, Naveen; Pan, Zhenwen; Lamarche, Cody J; Wetherby, Anthony; Waterman, Rory; Tokumoto, Takahisa; Cherian, Judy G; Headrick, Randall L; McGill, Stephen A; Furis, Madalina I

2015-11-12

The origins of spin exchange in crystalline thin films of Copper Octabutoxy Phthalocyanine (Cu-OBPc) are investigated using Magnetic Circular Dichroism (MCD) spectroscopy. These studies are made possible by a solution deposition technique which produces highly ordered films with macroscopic grain sizes suitable for optical studies. For temperatures lower than 2 K, the contribution of a specific state in the valence band manifold originating from the hybridized lone pair in nitrogen orbitals of the Phthalocyanine ring, bears the Brillouin-like signature of an exchange interaction with the localized d-shell Cu spins. A comprehensive MCD spectral analysis coupled with a molecular field model of a σπ - d exchange analogous to sp-d interactions in Diluted Magnetic Semiconductors (DMS) renders an enhanced Zeeman splitting and a modified g-factor of -4 for the electrons that mediate the interaction. These studies define an experimental tool for identifying electronic states involved in spin-dependent exchange interactions in organic materials.
Decadal Variability of Temperature and Salinity in the Northwest Atlantic Ocean

NASA Astrophysics Data System (ADS)

Mishonov, A. V.; Seidov, D.; Reagan, J. R.; Boyer, T.; Parsons, A. R.

2017-12-01

There are only a few regions in the World Ocean where the density of observations collected over the past 60 years is sufficient for reliable data mapping with spatial resolutions finer than one-degree. The Northwest Atlantic basin is one such regions where a spatial resolution of gridded temperature and salinity fields, comparable to those generated by eddy-resolving numerical models of ocean circulation, has recently becomes available. Using the new high-resolution Northwest Atlantic Regional Climatology, built on quarter-degree and one-tenth-degree resolution fields, we analyzed decadal variability and trends of temperature and salinity over 60 years in the Northwest Atlantic, and two 30-year ocean climates of 1955-1984 and 1985-2012 to evaluate the oceanic climate shift in this region. The 30-year climate shift is demonstrated using an innovative 3-D visualization of temperature and salinity. Spatial and temporal variability of heat accumulation found in previous research of the entire North Atlantic Ocean persists in the Northwest Atlantic Ocean. Salinity changes between two 30-year climates were also computed and are discussed.
Using ERA-Interim reanalysis for creating datasets of energy-relevant climate variables

NASA Astrophysics Data System (ADS)

Jones, Philip D.; Harpham, Colin; Troccoli, Alberto; Gschwind, Benoit; Ranchin, Thierry; Wald, Lucien; Goodess, Clare M.; Dorling, Stephen

2017-07-01

The construction of a bias-adjusted dataset of climate variables at the near surface using ERA-Interim reanalysis is presented. A number of different, variable-dependent, bias-adjustment approaches have been proposed. Here we modify the parameters of different distributions (depending on the variable), adjusting ERA-Interim based on gridded station or direct station observations. The variables are air temperature, dewpoint temperature, precipitation (daily only), solar radiation, wind speed, and relative humidity. These are available on either 3 or 6 h timescales over the period 1979-2016. The resulting bias-adjusted dataset is available through the Climate Data Store (CDS) of the Copernicus Climate Change Data Store (C3S) and can be accessed at present from ftp://ecem.climate.copernicus.eu. The benefit of performing bias adjustment is demonstrated by comparing initial and bias-adjusted ERA-Interim data against gridded observational fields.
Effect of O-methyl-β-cyclodextrin-modified magnetic nanoparticles on the uptake and extracellular level of l-glutamate in brain nerve terminals.

PubMed

Horák, Daniel; Beneš, Milan; Procházková, Zuzana; Trchová, Miroslava; Borysov, Arsenii; Pastukhov, Artem; Paliienko, Konstantin; Borisova, Tatiana

2017-01-01

Changes in cholesterol concentration in the plasma membrane of presynaptic nerve terminals nonspecifically modulate glutamate transport and homeostasis in the central nervous system. Reduction of the cholesterol content in isolated rat brain nerve terminals (synaptosomes) using cholesterol-depleting agents decreases the glutamate uptake and increases the extracellular level of glutamate in nerve terminals. Extraction of cholesterol from the plasma membrane and its further removal from the synaptosomes by external magnetic field can be achieved by means of magnetic nanoparticles with immobilized cholesterol-depleting agent such as O-methyl-β-cyclodextrin (MCD). A simple approach is developed for preparation of maghemite (γ-Fe 2 O 3 ) nanoparticles containing chemically bonded MCD. The method is based on preparation of a silanization agent containing MCD. It is synthesized by the reaction of triethoxy(3-isocyanatopropyl)silane with MCD. Base-catalyzed silanization of superparamagnetic γ-Fe 2 O 3 provides a relatively stable colloid product containing 48μmol of MCDg -1 . MCD-modified γ-Fe 2 O 3 nanoparticles decrease the initial rate of the uptake and accumulation of l-[ 14 C]glutamate and increase the extracellular l-[ 14 C]glutamate level in the preparation of nerve terminals. The effect of MCD-immobilized nanoparticles is the same as that of MCD solution; moreover, magnetic manipulation of the nanoparticles enables removal of bonded cholesterol. Copyright © 2016 Elsevier B.V. All rights reserved.
Color visualization for fluid flow prediction

NASA Technical Reports Server (NTRS)

Smith, R. E.; Speray, D. E.

1982-01-01

High-resolution raster scan color graphics allow variables to be presented as a continuum, in a color-coded picture that is referenced to a geometry such as a flow field grid or a boundary surface. Software is used to map a scalar variable such as pressure or temperature, defined on a two-dimensional slice of a flow field. The geometric shape is preserved in the resulting picture, and the relative magnitude of the variable is color-coded onto the geometric shape. The primary numerical process for color coding is an efficient search along a raster scan line to locate the quadrilteral block in the grid that bounds each pixel on the line. Tension spline interpolation is performed relative to the grid for specific values of the scalar variable, which is then color coded. When all pixels for the field of view are color-defined, a picture is played back from a memory device onto a television screen.
Quantum interference magnetoconductance of polycrystalline germanium films in the variable-range hopping regime

NASA Astrophysics Data System (ADS)

Li, Zhaoguo; Peng, Liping; Zhang, Jicheng; Li, Jia; Zeng, Yong; Zhan, Zhiqiang; Wu, Weidong

2018-06-01

Direct evidence of quantum interference magnetotransport in polycrystalline germanium films in the variable-range hopping (VRH) regime is reported. The temperature dependence of the conductivity of germanium films fulfilled the Mott VRH mechanism with the form of ? in the low-temperature regime (?). For the magnetotransport behaviour of our germanium films in the VRH regime, a crossover, from negative magnetoconductance at the low-field to positive magnetoconductance at the high-field, is observed while the zero-field conductivity is higher than the critical value (?). In the regime of ?, the magnetoconductance is positive and quadratic in the field for some germanium films. These features are in agreement with the VRH magnetotransport theory based on the quantum interference effect among random paths in the hopping process.
Variable intertidal temperature explains why disease endangers black abalone

USGS Publications Warehouse

Ben-Horin, Tal; Lenihan, Hunter S.; Lafferty, Kevin D.

2013-01-01

Epidemiological theory suggests that pathogens will not cause host extinctions because agents of disease should fade out when the host population is driven below a threshold density. Nevertheless, infectious diseases have threatened species with extinction on local scales by maintaining high incidence and the ability to spread efficiently even as host populations decline. Intertidal black abalone (Haliotis cracherodii), but not other abalone species, went extinct locally throughout much of southern California following the emergence of a Rickettsiales-like pathogen in the mid-1980s. The rickettsial disease, a condition known as withering syndrome (WS), and associated mortality occur at elevated water temperatures. We measured abalone body temperatures in the field and experimentally manipulated intertidal environmental conditions in the laboratory, testing the influence of mean temperature and daily temperature variability on key epizootiological processes of WS. Daily temperature variability increased the susceptibility of black abalone to infection, but disease expression occurred only at warm water temperatures and was independent of temperature variability. These results imply that high thermal variation of the marine intertidal zone allows the pathogen to readily infect black abalone, but infected individuals remain asymptomatic until water temperatures periodically exceed thresholds modulating WS. Mass mortalities can therefore occur before pathogen transmission is limited by density-dependent factors.
Efros-Shklovskii variable range hopping and nonlinear transport in 1 T /1 T'-MoS2

NASA Astrophysics Data System (ADS)

Papadopoulos, N.; Steele, G. A.; van der Zant, H. S. J.

2017-12-01

We have studied temperature- and electric-field-dependent carrier transport in single flakes of MoS2 treated with n -butyllithium. The temperature dependence of the four-terminal resistance follows the Efros-Shklovskii variable range hopping conduction mechanism. From measurements in the Ohmic and non-Ohmic regime, we estimate the localization length and the average hopping length of the carriers, as well as the effective dielectric constant. Furthermore, a comparison between two- and four-probe measurements yields a contact resistance that increases significantly with decreasing temperature.
A reference time scale for Site U1385 (Shackleton Site) on the SW Iberian Margin

NASA Astrophysics Data System (ADS)

Hodell, D.; Lourens, L.; Crowhurst, S.; Konijnendijk, T.; Tjallingii, R.; Jiménez-Espejo, F.; Skinner, L.; Tzedakis, P. C.; Abrantes, Fatima; Acton, Gary D.; Alvarez Zarikian, Carlos A.; Bahr, André; Balestra, Barbara; Barranco, Estefanìa Llave; Carrara, Gabriela; Ducassou, Emmanuelle; Flood, Roger D.; Flores, José-Abel; Furota, Satoshi; Grimalt, Joan; Grunert, Patrick; Hernández-Molina, Javier; Kim, Jin Kyoung; Krissek, Lawrence A.; Kuroda, Junichiro; Li, Baohua; Lofi, Johanna; Margari, Vasiliki; Martrat, Belen; Miller, Madeline D.; Nanayama, Futoshi; Nishida, Naohisa; Richter, Carl; Rodrigues, Teresa; Rodríguez-Tovar, Francisco J.; Roque, Ana Cristina Freixo; Sanchez Goñi, Maria F.; Sierro Sánchez, Francisco J.; Singh, Arun D.; Sloss, Craig R.; Stow, Dorrik A. V.; Takashimizu, Yasuhiro; Tzanova, Alexandrina; Voelker, Antje; Xuan, Chuang; Williams, Trevor

2015-10-01

We produced a composite depth scale and chronology for Site U1385 on the SW Iberian Margin. Using log(Ca/Ti) measured by core scanning XRF at 1-cm resolution in all holes, a composite section was constructed to 166.5 meter composite depth (mcd) that corrects for stretching and squeezing in each core. Oxygen isotopes of benthic foraminifera were correlated to a stacked δ18O reference signal (LR04) to produce an oxygen isotope stratigraphy and age model. Variations in sediment color contain very strong precession signals at Site U1385, and the amplitude modulation of these cycles provides a powerful tool for developing an orbitally-tuned age model. We tuned the U1385 record by correlating peaks in L* to the local summer insolation maxima at 37°N. The benthic δ18O record of Site U1385, when placed on the tuned age model, generally agrees with other time scales within their respective chronologic uncertainties. The age model is transferred to down-core data to produce a continuous time series of log(Ca/Ti) that reflect relative changes of biogenic carbonate and detrital sediment. Biogenic carbonate increases during interglacial and interstadial climate states and decreases during glacial and stadial periods. Much of the variance in the log(Ca/Ti) is explained by a linear combination of orbital frequencies (precession, tilt and eccentricity), whereas the residual signal reflects suborbital climate variability. The strong correlation between suborbital log(Ca/Ti) variability and Greenland temperature over the last glacial cycle at Site U1385 suggests that this signal can be used as a proxy for millennial-scale climate variability over the past 1.5 Ma. Millennial climate variability, as expressed by log(Ca/Ti) at Site U1385, was a persistent feature of glacial climates over the past 1.5 Ma, including glacial periods of the early Pleistocene ('41-kyr world') when boundary conditions differed significantly from those of the late Pleistocene ('100-kyr world'). Suborbital variability was suppressed during interglacial stages and enhanced during glacial periods, especially when benthic δ18O surpassed 3.3-3.5‰. Each glacial inception was marked by appearance of strong millennial variability and each deglaciation was preceded by a terminal stadial event. Suborbital variability may be a symptomatic feature of glacial climate or, alternatively, may play a more active role in the inception and/or termination of glacial cycles.
Numerical investigation for entropy generation in hydromagnetic flow of fluid with variable properties and slip

NASA Astrophysics Data System (ADS)

Khan, M. Ijaz; Hayat, Tasawar; Alsaedi, Ahmed

2018-02-01

This modeling and computations present the study of viscous fluid flow with variable properties by a rotating stretchable disk. Rotating flow is generated through nonlinear rotating stretching surface. Nonlinear thermal radiation and heat generation/absorption are studied. Flow is conducting for a constant applied magnetic field. No polarization is taken. Induced magnetic field is not taken into account. Attention is focused on the entropy generation rate and Bejan number. The entropy generation rate and Bejan number clearly depend on velocity and thermal fields. The von Kármán approach is utilized to convert the partial differential expressions into ordinary ones. These expressions are non-dimensionalized, and numerical results are obtained for flow variables. The effects of the magnetic parameter, Prandtl number, radiative parameter, heat generation/absorption parameter, and slip parameter on velocity and temperature fields as well as the entropy generation rate and Bejan number are discussed. Drag forces (radial and tangential) and heat transfer rates are calculated and discussed. Furthermore the entropy generation rate is a decreasing function of magnetic variable and Reynolds number. The Bejan number effect on the entropy generation rate is reverse to that of the magnetic variable. Also opposite behavior of heat transfers is observed for varying estimations of radiative and slip variables.
Modeling temporal and large-scale spatial variability of soil respiration from soil water availability, temperature and vegetation productivity indices

NASA Astrophysics Data System (ADS)

Reichstein, Markus; Rey, Ana; Freibauer, Annette; Tenhunen, John; Valentini, Riccardo; Banza, Joao; Casals, Pere; Cheng, Yufu; Grünzweig, Jose M.; Irvine, James; Joffre, Richard; Law, Beverly E.; Loustau, Denis; Miglietta, Franco; Oechel, Walter; Ourcival, Jean-Marc; Pereira, Joao S.; Peressotti, Alessandro; Ponti, Francesca; Qi, Ye; Rambal, Serge; Rayment, Mark; Romanya, Joan; Rossi, Federica; Tedeschi, Vanessa; Tirone, Giampiero; Xu, Ming; Yakir, Dan

2003-12-01

Field-chamber measurements of soil respiration from 17 different forest and shrubland sites in Europe and North America were summarized and analyzed with the goal to develop a model describing seasonal, interannual and spatial variability of soil respiration as affected by water availability, temperature, and site properties. The analysis was performed at a daily and at a monthly time step. With the daily time step, the relative soil water content in the upper soil layer expressed as a fraction of field capacity was a good predictor of soil respiration at all sites. Among the site variables tested, those related to site productivity (e.g., leaf area index) correlated significantly with soil respiration, while carbon pool variables like standing biomass or the litter and soil carbon stocks did not show a clear relationship with soil respiration. Furthermore, it was evidenced that the effect of precipitation on soil respiration stretched beyond its direct effect via soil moisture. A general statistical nonlinear regression model was developed to describe soil respiration as dependent on soil temperature, soil water content, and site-specific maximum leaf area index. The model explained nearly two thirds of the temporal and intersite variability of soil respiration with a mean absolute error of 0.82 μmol m-2 s-1. The parameterized model exhibits the following principal properties: (1) At a relative amount of upper-layer soil water of 16% of field capacity, half-maximal soil respiration rates are reached. (2) The apparent temperature sensitivity of soil respiration measured as Q10 varies between 1 and 5 depending on soil temperature and water content. (3) Soil respiration under reference moisture and temperature conditions is linearly related to maximum site leaf area index. At a monthly timescale, we employed the approach by [2002] that used monthly precipitation and air temperature to globally predict soil respiration (T&P model). While this model was able to explain some of the month-to-month variability of soil respiration, it failed to capture the intersite variability, regardless of whether the original or a new optimized model parameterization was used. In both cases, the residuals were strongly related to maximum site leaf area index. Thus, for a monthly timescale, we developed a simple T&P&LAI model that includes leaf area index as an additional predictor of soil respiration. This extended but still simple model performed nearly as well as the more detailed time step model and explained 50% of the overall and 65% of the site-to-site variability. Consequently, better estimates of globally distributed soil respiration should be obtained with the new model driven by satellite estimates of leaf area index. Before application at the continental or global scale, this approach should be further tested in boreal, cold-temperate, and tropical biomes as well as for non-woody vegetation.
Understanding Cirrus Ice Crystal Number Variability for Different Heterogeneous Ice Nucleation Spectra

NASA Technical Reports Server (NTRS)

Sullivan, Sylvia C.; Betancourt, Ricardo Morales; Barahona, Donifan; Nenes, Athanasios

2016-01-01

Along with minimizing parameter uncertainty, understanding the cause of temporal and spatial variability of the nucleated ice crystal number, Ni, is key to improving the representation of cirrus clouds in climate models. To this end, sensitivities of Ni to input variables like aerosol number and diameter provide valuable information about nucleation regime and efficiency for a given model formulation. Here we use the adjoint model of the adjoint of a cirrus formation parameterization (Barahona and Nenes, 2009b) to understand Ni variability for various ice-nucleating particle (INP) spectra. Inputs are generated with the Community Atmosphere Model version 5, and simulations are done with a theoretically derived spectrum, an empirical lab-based spectrum and two field-based empirical spectra that differ in the nucleation threshold for black carbon particles and in the active site density for dust. The magnitude and sign of Ni sensitivity to insoluble aerosol number can be directly linked to nucleation regime and efficiency of various INP. The lab-based spectrum calculates much higher INP efficiencies than field-based ones, which reveals a disparity in aerosol surface properties. Ni sensitivity to temperature tends to be low, due to the compensating effects of temperature on INP spectrum parameters; this low temperature sensitivity regime has been experimentally reported before but never deconstructed as done here.
Major and trace element modeling of mid-ocean ridge mantle melting from the garnet to the plagioclase stability fields: Generating local and global compositional variability

NASA Astrophysics Data System (ADS)

Brown, S. M.; Behn, M. D.; Grove, T. L.

2017-12-01

We present results of a combined petrologic - geochemical (major and trace element) - geodynamical forward model for mantle melting and subsequent melt modification. The model advances Behn & Grove (2015), and is calibrated using experimental petrology. Our model allows for melting in the plagioclase, spinel, and garnet fields with a flexible retained melt fraction (from pure batch to pure fractional), tracks residual mantle composition, and includes melting with water, variable melt productivity, and mantle mode calculations. This approach is valuable for understanding oceanic crustal accretion, which involves mantle melting and melt modification by migration and aggregation. These igneous processes result in mid-ocean ridge basalts that vary in composition at the local (segment) and global scale. The important variables are geophysical and geochemical and include mantle composition, potential temperature, mantle flow, and spreading rate. Accordingly, our model allows us to systematically quantify the importance of each of these external variables. In addition to discriminating melt generation effects, we are able to discriminate the effects of different melt modification processes (inefficient pooling, melt-rock reaction, and fractional crystallization) in generating both local, segment-scale and global-scale compositional variability. We quantify the influence of a specific igneous process on the generation of oceanic crust as a function of variations in the external variables. We also find that it is unlikely that garnet lherzolite melting produces a signature in either major or trace element compositions formed from aggregated melts, because when melting does occur in the garnet field at high mantle temperature, it contributes a relatively small, uniform fraction (< 10%) of the pooled melt compositions at all spreading rates. Additionally, while increasing water content and/or temperature promote garnet melting, they also increase melt extent, pushing the pooled composition to lower Sm/Yb and higher Lu/Hf.
DOE Office of Scientific and Technical Information (OSTI.GOV)

Elrod, D.C.; Turner, W.D.

TRUMP solves a general nonlinear parabolic partial differential equation describing flow in various kinds of potential fields, such as fields of temperature, pressure, or electricity and magnetism; simultaneously, it will solve two additional equations representing, in thermal problems, heat production by decomposition of two reactants having rate constants with a general Arrhenius temperature dependence. Steady-state and transient flow in one, two, or three dimensions are considered in geometrical configurations having simple or complex shapes and structures. Problem parameters may vary with spatial position, time, or primary dependent variables, temperature, pressure, or field strength. Initial conditions may vary with spatial position,more » and among the criteria that may be specified for ending a problem are upper and lower limits on the size of the primary dependent variable, upper limits on the problem time or on the number of time-steps or on the computer time, and attainment of steady state.« less
Transport critical current measurement apparatus using liquid nitrogen cooled high-T(c) superconducting magnet with variable temperature insert.

PubMed

Nishijima, G; Kitaguchi, H; Tshuchiya, Y; Nishimura, T; Kato, T

2013-01-01

We have developed an apparatus to investigate transport critical current (I(c)) as a function of magnetic field and temperature using only liquid nitrogen. The apparatus consists of a (Bi,Pb)(2)Sr(2)Ca(2)Cu(3)O(10) (Bi-2223) superconducting magnet, an outer dewar, and a variable temperature insert (VTI). The magnet, which is operated in depressurized liquid nitrogen, generates magnetic field up to 1.26 T. The sample is also immersed in liquid nitrogen. The pressure in the VTI is controlled from 0.02 to 0.3 MPa, which corresponds to temperature ranging from 66 to 88 K. We have confirmed the long-term stable operation of the Bi-2223 magnet at 1 T. The temperature stability of the sample at high transport current was also demonstrated. The apparatus provides easy-operating I(c) measurement environment for a high-T(c) superconductor up to 500 A in magnetic fields up to 1 T and in temperatures ranging from 66 to 88 K.
Thermal radiation and heat generation/absorption aspects in third grade magneto-nanofluid over a slendering stretching sheet with Newtonian conditions

NASA Astrophysics Data System (ADS)

Qayyum, Sajid; Hayat, Tasawar; Alsaedi, Ahmed

2018-05-01

Mathematical modeling for magnetohydrodynamic (MHD) radiative flow of third grade nano-material bounded by a nonlinear stretching sheet with variable thickness is introduced. The sheet moves with nonlinear velocity. Definitions of thermal radiation and heat generation/absorption are utilized in the energy expression. Intention in present investigation is to develop a model for nanomaterial comprising Brownian motion and thermophoresis phenomena. Newtonian conditions for heat and mass species are imposed. Governing equations of the locally similar flow are attempted through a homotopic technique and behaviors of involved variables on the flow fields are displayed graphically. It is revealed that increasing values of thermal conjugate variable corresponds to high temperature. Numerical investigation are explored to obtain the results of skin friction coefficient and local Nusselt and Sherwood numbers. It is revealed that velocity field reduces in the frame of magnetic variable while reverse situation is observed due to mixed convection parameter. Here qualitative behaviors of thermal field and heat transfer rate are opposite for thermophoresis variable. Moreover nanoparticle concentration and local Sherwood number via Brownian motion parameter are opposite.
Development of a microwave photoconductance measurement technique for the study of carrier dynamics in highly-excited 4H-SiC

NASA Astrophysics Data System (ADS)

Subačius, L.; Jarašiūnas, K.; Ščajev, P.; Kato, M.

2015-12-01

The microwave conductance decay (MCD) technique combining an initially matched transmission line setup and picosecond optical excitation was developed and applied for the monitoring of transmitted and reflected microwave power transients in a 4H-SiC epilayer in a wide excitation range, from 2 × 1014 to 1018 cm-3. The excitation-dependent decrease in measurement sensitivity in the power-law relations of the transients was observed at excess carrier densities above 1016 cm-3 due to the line mismatches and decrease in the internal microwave field in the illuminated sample. The calibration procedure of MCD data on excess carrier density was applied for the correction of the MCD transients and resulted in nearly identical MCD kinetics in the reflection and transmission. In a 35 μm-thick n-type 4H-SiC epilayer, the tendencies of the gradual decrease of the initial decay time with an excitation increase and the excitation-enhanced carrier recombination rate in MCD tails were analyzed numerically. These tendencies were attributed to the excitation dependent surface recombination rate and the enhanced trap-related bulk recombination, correspondingly.
Changes in the zonal mean flow, temperature, and planetary waves observed in the Northern Hemisphere mid-winter months during the last decades

NASA Astrophysics Data System (ADS)

Rakushina, E. V.; Ermakova, T. S.; Pogoreltsev, A. I.

2018-06-01

Four sets of data: the UK Met Office, Modern Era Retrospective-analysis for Research and Applications (MERRA), Japanese 55-year Reanalysis data (JRA-55), and ERA-Interim data (ERA) have been used to estimate the climatic variability of the zonal mean flow, temperature, and Stationary Planetary Waves (SPW1, SPW2) from the troposphere up to the lower mesosphere levels. The composites of the meteorological fields during mid-winter month have been averaged over the first (1995-2005) and second (2006-2016) 11 years intervals and have been compared mainly paying attention to interannual and intraseasonal variability. Results show that changes in the mean fields and SPW2 are weaker and statistical significance of these changes is lower in comparison with the changes observed in the intraseasonal variability of these characteristics. All data sets demonstrate a decrease of SPW1 amplitude at the higher-middle latitudes in the lower stratosphere and opposite effect in the upper stratosphere. However, there is an increase of the intraseasonal variability for all meteorological parameters and this rise is statistically significant. The results obtained show that UK Met Office data demonstrate stronger changes and increase of the intraseasonal variability in comparison with other data sets.
Alternatives to Center of Gravity Analysis

DTIC Science & Technology

2013-04-04

Field Manual 3-0 Operations (FM 3-0), A-1-A-4, and Mission & Values, McDonalds. http://www.aboutmcdonalds.com/ mcd /our_ company...Porter, Competitive Strategy, 1980. “Mission & Values,” McDonalds. http://www.aboutmcdonalds.com/ mcd /our_ company/mission_and_values.html...Thailand and Cambodia reach deal on temple border,”BBC.com, December 11, 2011. http://www.bbc.co.uk/news/world- asia -pacific-16294309. “The
Risk perception of the "mad cow disease" in France: determinants and consequences.

PubMed

Setbon, Michel; Raude, Jocelyn; Fischler, Claude; Flahault, Antoine

2005-08-01

Since 1996, when bovine spongiform encephalopathy (BSE) was assessed as a possible human transmissible disease, a variant of Creutzfeldt-Jakob disease (vCJD), French people have entered into a long period of fear and avoidance of beef and bovine byproducts, which produced an unprecedented collapse in the beef market. This article deals with the perceived risk of the "mad cow disease" (MCD) in the French general population. Two surveys were conducted on a representative sample of the adult population, the first one in 2000 during the peak of the crisis and the second one 13 months later in a quieter period. The main assumption we made was that changes in beef consumption are strongly related to the perceived risk of MCD, which we defined as people's cognitive and affective responses to hazard. Our objective was to identify the determinants and consequences of this perceived risk and to compare them in different sociopolitical contexts. The results issued from a bivariate and multivariate analysis show that: (i) the distribution of most of the variables significantly related to the perceived risk identified in the first survey had changed in the second survey, in relation with the reduction of worry and the resumption of national beef consumption; (ii) the propensity for self-protection through avoiding or ceasing beef eating was more related to feelings of worry than to subjective vCJD risk assessments; and (iii) the main determinant of less avoidance to beef products was the preference for beef, a feeling identified prior to emergence of the risk of MCD, remaining unchanged in various contexts.

Minimal Change Disease

PubMed Central

Massella, Laura; Ruggiero, Barbara; Emma, Francesco

2017-01-01

Minimal change disease (MCD) is a major cause of idiopathic nephrotic syndrome (NS), characterized by intense proteinuria leading to edema and intravascular volume depletion. In adults, it accounts for approximately 15% of patients with idiopathic NS, reaching a much higher percentage at younger ages, up to 70%–90% in children >1 year of age. In the pediatric setting, a renal biopsy is usually not performed if presentation is typical and the patient responds to therapy with oral prednisone at conventional doses. Therefore, in this setting steroid-sensitive NS can be considered synonymous with MCD. The pathologic hallmark of disease is absence of visible alterations by light microscopy and effacement of foot processes by electron microscopy. Although the cause is unknown and it is likely that different subgroups of disease recognize a different pathogenesis, immunologic dysregulation and modifications of the podocyte are thought to synergize in altering the integrity of the glomerular basement membrane and therefore determining proteinuria. The mainstay of therapy is prednisone, but steroid-sensitive forms frequently relapse and this leads to a percentage of patients requiring second-line steroid-sparing immunosuppression. The outcome is variable, but forms of MCD that respond to steroids usually do not lead to chronic renal damage, whereas forms that are unresponsive to steroids may subsequently reveal themselves as FSGS. However, in a substantial number of patients the disease is recurrent and requires long-term immunosuppression, with significant morbidity because of side effects. Recent therapeutic advances, such as the use of anti-CD20 antibodies, have provided long-term remission off-therapy and suggest new hypotheses for disease pathogenesis. PMID:27940460
Ground-based measurement of surface temperature and thermal emissivity

NASA Technical Reports Server (NTRS)

Owe, M.; Van De Griend, A. A.

1994-01-01

Motorized cable systems for transporting infrared thermometers have been used successfully during several international field campaigns. Systems may be configured with as many as four thermal sensors up to 9 m above the surface, and traverse a 30 m transect. Ground and canopy temperatures are important for solving the surface energy balance. The spatial variability of surface temperature is often great, so that averaged point measurements result in highly inaccurate areal estimates. The cable systems are ideal for quantifying both temporal and spatial variabilities. Thermal emissivity is also necessary for deriving the absolute physical temperature, and measurements may be made with a portable measuring box.
Validation of the MODIS Collection 6 MCD64 Global Burned Area Product

NASA Astrophysics Data System (ADS)

Boschetti, L.; Roy, D. P.; Giglio, L.; Stehman, S. V.; Humber, M. L.; Sathyachandran, S. K.; Zubkova, M.; Melchiorre, A.; Huang, H.; Huo, L. Z.

2017-12-01

The research, policy and management applications of satellite products place a high priority on rigorously assessing their accuracy. A number of NASA, ESA and EU funded global and continental burned area products have been developed using coarse spatial resolution satellite data, and have the potential to become part of a long-term fire Essential Climate Variable. These products have usually been validated by comparison with reference burned area maps derived by visual interpretation of Landsat or similar spatial resolution data selected on an ad hoc basis. More optimally, a design-based validation method should be adopted, characterized by the selection of reference data via probability sampling. Design based techniques have been used for annual land cover and land cover change product validation, but have not been widely used for burned area products, or for other products that are highly variable in time and space (e.g. snow, floods, other non-permanent phenomena). This has been due to the challenge of designing an appropriate sampling strategy, and to the cost and limited availability of independent reference data. This paper describes the validation procedure adopted for the latest Collection 6 version of the MODIS Global Burned Area product (MCD64, Giglio et al, 2009). We used a tri-dimensional sampling grid that allows for probability sampling of Landsat data in time and in space (Boschetti et al, 2016). To sample the globe in the spatial domain with non-overlapping sampling units, the Thiessen Scene Area (TSA) tessellation of the Landsat WRS path/rows is used. The TSA grid is then combined with the 16-day Landsat acquisition calendar to provide tri-dimensonal elements (voxels). This allows the implementation of a sampling design where not only the location but also the time interval of the reference data is explicitly drawn through stratified random sampling. The novel sampling approach was used for the selection of a reference dataset consisting of 700 Landsat 8 image pairs, interpreted according to the CEOS Burned Area Validation Protocol (Boschetti et al., 2009). Standard quantitative burned area product accuracy measures that are important for different types of fire users (Boschetti et al, 2016, Roy and Boschetti, 2009, Boschetti et al, 2004) are computed to characterize the accuracy of the MCD64 product.
Coping with daily thermal variability: behavioural performance of an ectotherm model in a warming world.

PubMed

Rojas, José M; Castillo, Simón B; Folguera, Guillermo; Abades, Sebastián; Bozinovic, Francisco

2014-01-01

Global climate change poses one of the greatest threats to species persistence. Most analyses of the potential biological impacts have focused on changes in mean temperature, but changes in thermal variance will also impact organisms and populations. We assessed the effects of acclimation to daily variance of temperature on dispersal and exploratory behavior in the terrestrial isopod Porcellio laevis in an open field. Acclimation treatments were 24 ± 0, 24 ± 4 and 24 ± 8 °C. Because the performance of ectotherms relates nonlinearly to temperature, we predicted that animals acclimated to a higher daily thermal variation should minimize the time exposed in the centre of open field, --i.e. increase the linearity of displacements. Consistent with our prediction, isopods acclimated to a thermally variable environment reduce their exploratory behaviour, hypothetically to minimize their exposure to adverse environmental conditions. This scenario as well as the long latency of animals after releases acclimated to variable environments is consistent with this idea. We suggested that to develop more realistic predictions about the biological impacts of climate change, one must consider the interactions between the mean and variance of environmental temperature on animals' performance.
Coping with Daily Thermal Variability: Behavioural Performance of an Ectotherm Model in a Warming World

PubMed Central

Rojas, José M.; Castillo, Simón B.; Folguera, Guillermo; Abades, Sebastián; Bozinovic, Francisco

2014-01-01

Global climate change poses one of the greatest threats to species persistence. Most analyses of the potential biological impacts have focused on changes in mean temperature, but changes in thermal variance will also impact organisms and populations. We assessed the effects of acclimation to daily variance of temperature on dispersal and exploratory behavior in the terrestrial isopod Porcellio laevis in an open field. Acclimation treatments were 24±0, 24±4 and 24±8°C. Because the performance of ectotherms relates nonlinearly to temperature, we predicted that animals acclimated to a higher daily thermal variation should minimize the time exposed in the centre of open field, – i.e. increase the linearity of displacements. Consistent with our prediction, isopods acclimated to a thermally variable environment reduce their exploratory behaviour, hypothetically to minimize their exposure to adverse environmental conditions. This scenario as well as the long latency of animals after releases acclimated to variable environments is consistent with this idea. We suggested that to develop more realistic predictions about the biological impacts of climate change, one must consider the interactions between the mean and variance of environmental temperature on animals' performance. PMID:25207653
Experimental and theoretical investigation of temperature-dependent electrical fatigue studies on 1-3 type piezocomposites

NASA Astrophysics Data System (ADS)

Mohan, Y.; Arockiarajan, A.

2016-03-01

1-3 type piezocomposites are very attractive materials for transducers and biomedical application, due to its high electromechanical coupling effects. Reliability study on 1-3 piezocomposites subjected to cyclic loading condition in transducer application is one of the primary concern. Hence, this study focuses on 1-3 piezocomposites for various PZT5A1 fiber volume fraction subjected to electrical fatigue loading up-to 106 cycles and at various elevated temperature. Initially experiments are performed on 1-3 piezocomposites, in order to understand the degradation phenomena due to various range in amplitude of electric fields (unipolar & bipolar), frequency of applied electric field and for various ambient temperature. Performing experiments for high cycle fatigue and for different fiber volume fraction of PZT5A1 is a time consuming process. Hence, a simplified macroscopic uni-axial model based on physical mechanisms of domain switching and continuum damage mechanics has been developed to predict the non-linear fatigue behaviour of 1-3 piezocomposites for temperature dependent electrical fatigue loading conditions. In this model, damage effects namely domain pinning, frozen domains and micro cracks, are considered as a damage variable (ω). Remnant variables and material properties are considered as a function of internal damage variable and the growth of the damage is derived empirically based on the experimental observation to predict the macroscopic changes in the properties. The measured material properties and dielectric hysteresis (electric displacement vs. electric field) as well as butterfly curves (longitudinal strain vs. electric field) are compared with the simulated results. It is observed that variation in amplitude of bipolar electric field and temperature has a strong influence on the response of 1-3 piezocomposites.
Photo-Luminescent Targets in Space

NASA Technical Reports Server (NTRS)

Maida, James; Kolomenski, Andrei

2017-01-01

Photo-luminescent ("glow in the dark") products have seen a dramatic increase in performance is the last 15 years with the use of a strontium aluminate formulation. Because of this, ISS uses photo-luminescent markers for interior emergency egress guidance. The marker is COTS material composed of strontium aluminate doped with europium, imbedded in PVC and achieves a light emission performance rated at 600/90 (600 mcd at 10 minutes and 90 mcd at 1 hour, 2 mcd is minimum required for human visibility). The ICA goal is to determine this material's effectiveness for use externally on ISS and/or on visiting vehicles, when packaged in Lexan for UV protection. A thermal test was conducted by EC to characterize the luminance emission profile of the material at extreme cold and hot temperatures, such as experienced on ISS.
Ground-based thermography of fluvial systems at low and high discharge reveals potential complex thermal heterogeneity driven by flow variation and bioroughness

USGS Publications Warehouse

Cardenas, M.B.; Harvey, J.W.; Packman, A.I.; Scott, D.T.

2008-01-01

Temperature is a primary physical and biogeochemical variable in aquatic systems. Field-based measurement of temperature at discrete sampling points has revealed temperature variability in fluvial systems, but traditional techniques do not readily allow for synoptic sampling schemes that can address temperature-related questions with broad, yet detailed, coverage. We present results of thermal infrared imaging at different stream discharge (base flow and peak flood) conditions using a handheld IR camera. Remotely sensed temperatures compare well with those measured with a digital thermometer. The thermal images show that periphyton, wood, and sandbars induce significant thermal heterogeneity during low stages. Moreover, the images indicate temperature variability within the periphyton community and within the partially submerged bars. The thermal heterogeneity was diminished during flood inundation, when the areas of more slowly moving water to the side of the stream differed in their temperature. The results have consequences for thermally sensitive hydroelogical processes and implications for models of those processes, especially those that assume an effective stream temperature. Copyright ?? 2008 John Wiley & Sons, Ltd.
Image-Subtraction Photometry of Variable Stars in the Field of the Globular Cluster NGC 6934

NASA Astrophysics Data System (ADS)

Kaluzny, J.; Olech, A.; Stanek, K. Z.

2001-03-01

We present CCD BVI photometry of 85 variable stars from the field of the globular cluster NGC 6934. The photometry was obtained with the image subtraction package ISIS. 35 variables are new identifications: 24 RRab stars, five RRc stars, two eclipsing binaries of W UMa-type, one SX Phe star, and three variables of other types. Both detected contact binaries are foreground stars. The SX Phe variable belongs most likely to the group of cluster blue stragglers. Large number of newly found RR Lyr variables in this cluster, as well as in other clusters recently observed by us, indicates that total RR Lyr population identified up to date in nearby galactic globular clusters is significantly (>30%) incomplete. Fourier decomposition of the light curves of RR Lyr variables was used to estimate the basic properties of these stars. From the analysis of RRc variables we obtain a mean mass of M=0.63 Msolar, luminosity logL/Lsolar=1.72, effective temperature Teff=7300 and helium abundance Y=0.27. The mean values of the absolute magnitude, metallicity (on Zinn's scale) and effective temperature for RRab variables are MV=0.81, [Fe/H]=-1.53 and Teff=6450, respectively. From the B-V color at minimum light of the RRab variables we obtained the color excess to NGC 6934 equal to E(B-V)=0.09+/-0.01. Different calibrations of absolute magnitudes of RRab and RRc available in literature were used to estimate apparent distance modulus of the cluster: (m-M)V=16.09+/-0.06. We note a likely error in the zero point of the HST-based V-band photometry of NGC 6934 recently presented by Piotto et al. Among analyzed sample of RR Lyr stars we have detected a short period and low amplitude variable which possibly belongs to the group of second overtone pulsators (RRe subtype variables). The BVI photometry of all variables is available electronically via anonymous ftp. The complete set of the CCD frames is available upon request. Based on observations obtained with the 1.2 m Telescope at the F. L. Whipple Observatory of the Harvard-Smithsonian Center for Astrophysics.
Numerical investigation of MHD flow with Soret and Dufour effect

NASA Astrophysics Data System (ADS)

Hayat, Tasawar; Nasir, Tehreem; Khan, Muhammad Ijaz; Alsaedi, Ahmed

2018-03-01

This paper describes the flow due to an exponentially curved surface subject to Soret and Dufour effects. Nonlinear velocity is considered. Exponentially curved stretchable sheet induced the flow. Fluid is electrical conducting through constant applied magnetic field. The governing flow expressions are reduced to ordinary ones and then tackled by numerical technique (Built-in-Shooting). Impacts of various flow variables on the dimensionless velocity, concentration and temperature fields are graphically presented and discussed in detail. Skin friction coefficient and Sherwood and Nusselt numbers are studied through graphs. Furthermore it is observed that Soret and Dufour variables regulate heat and mass transfer rates. It is also noteworthy that velocity decays for higher magnetic variable. Skin friction magnitude decays via curvature and magnetic variables. Also mass transfer gradient or rate of mass transport enhances for higher estimations of curvature parameter and Schmidt number.
Characterization of Plasma Discharges in a High-Field Magnetic Tandem Mirror

NASA Technical Reports Server (NTRS)

Chang-Diaz, Franklin R.

1998-01-01

High density magnetized plasma discharges in open-ended geometries, like Tandem Mirrors, have a variety of space applications. Chief among them is the production of variable Specific Impulse (I(sub sp)) and variable thrust in a magnetic nozzle. Our research group is pursuing the experimental characterization of such discharges in our high-field facility located at the Advanced Space Propulsion Laboratory (ASPL). These studies focus on identifying plasma stability criteria as functions of density, temperature and magnetic field strength. Plasma heating is accomplished by both Electron and Ion Cyclotron Resonance (ECR and ICR) at frequencies of 2-3 Ghz and 1-30 Mhz respectively, for both Hydrogen and Helium. Electron density and temperature has measured by movable Langmuir probes. Macroscopic plasma stability is being investigated in ongoing research.
Control parameters of the martian dune field positions at planetary scale: tests by the MCD

NASA Astrophysics Data System (ADS)

allemand, pascal

2016-04-01

The surface of Mars is occupied by more than 500 dunes fields mainly located inside impact craters of the south hemisphere and near the north polar cap. The questions of the activity of martian dunes and of the localization of the martian dune fields are not completely solved. It has been demonstrated recently by image observation and image correlation that some of these dune fields are clearly active. The sand flux of one of them has been even estimated. But there is no global view of the degree of activity of each the dune fields. (2)The topography of impact craters in which dune fields are localized is an important factor of their position. But there is no consensus of the effect of global atmospheric circulation on dune field localization. These two questions are addressed using the results of Mars Climate Database 5.2 (MCD) (Millour, 2015; Forget et al., 1999). The wind fields of the MCD have been first validated against the observations made on active dune fields. Using a classical transport law, the Drift Potential (DP) and the Relative Drift Potential (RDP) have been computed for each dune fields. A good correlation exists between the position of dune fields and specific values of these two parameters. The activity of each dune field is estimated from these parameters and tested on some examples by image observations. Finally a map of sand flow has been computed at the scale of the planet. This map shows that sand and dust is trapped in specific regions. These regions correspond to the area of dune field concentration.
Advances in satellite remote sensing of environmental variables for epidemiological applications.

PubMed

Goetz, S J; Prince, S D; Small, J

2000-01-01

Earth-observing satellites have provided an unprecedented view of the land surface but have been exploited relatively little for the measurement of environmental variables of particular relevance to epidemiology. Recent advances in techniques to recover continuous fields of air temperature, humidity, and vapour pressure deficit from remotely sensed observations have significant potential for disease vector monitoring and related epidemiological applications. We report on the development of techniques to map environmental variables with relevance to the prediction of the relative abundance of disease vectors and intermediate hosts. Improvements to current methods of obtaining information on vegetation properties, canopy and surface temperature and soil moisture over large areas are also discussed. Algorithms used to measure these variables incorporate visible, near-infrared and thermal infrared radiation observations derived from time series of satellite-based sensors, focused here primarily but not exclusively on the Advanced Very High Resolution Radiometer (AVHRR) instruments. The variables compare favourably with surface measurements over a broad array of conditions at several study sites, and maps of retrieved variables captured patterns of spatial variability comparable to, and locally more accurate than, spatially interpolated meteorological observations. Application of multi-temporal maps of these variables are discussed in relation to current epidemiological research on the distribution and abundance of some common disease vectors.
METEOROLOGICAL AND TRANSPORT MODELING

EPA Science Inventory

Advanced air quality simulation models, such as CMAQ, as well as other transport and dispersion models, require accurate and detailed meteorology fields. These meteorology fields include primary 3-dimensional dynamical and thermodynamical variables (e.g., winds, temperature, mo...
Body temperature variability (Part 2): masking influences of body temperature variability and a review of body temperature variability in disease.

PubMed

Kelly, Gregory S

2007-03-01

This is the second of a two-part review on body temperature variability. Part 1 discussed historical and modern findings on average body temperatures. It also discussed endogenous sources of temperature variability, including variations caused by site of measurement; circadian, menstrual, and annual biological rhythms; fitness; and aging. Part 2 reviews the effects of exogenous masking agents - external factors in the environment, diet, or lifestyle that can be a significant source of body temperature variability. Body temperature variability findings in disease states are also reviewed.
Individual and collective modes of surface magnetoplasmon in thiolate-protected silver nanoparticles studied by MCD spectroscopy

NASA Astrophysics Data System (ADS)

Yao, Hiroshi; Shiratsu, Taisuke

2016-05-01

Large magneto-optical (MO) responses at the energy of localized surface plasmon resonance (LSPR), namely, surface magnetoplasmons, are demonstrated for the first time in thiolate-protected silver nanoparticles with magnetic circular dichroism (MCD) spectroscopy. The samples examined are decanethiol (DT)-, azobenzenethiol (ABT)-, and ABT/DT mixed-monolayer-protected Ag nanoparticles. ABT-protected Ag nanoparticles are somewhat aggregated and thus exhibit a broad, collective mode of plasmonic absorption, whereas other samples with highly-dispersed nanoparticles show an individual mode of LSPR absorption. In all Ag nanoparticles, a derivative-like MCD signal is observed under an applied magnetic field of 1.6 T, which can be explained in terms of two circular modes of magnetoplasmon caused by the increase (or decrease) in the Lorentz force imparted on the free electrons that oscillate in the left (or right) circular orbits in the nanosphere. For the Ag nanoparticles exhibiting an individual LSPR mode, in particular, simultaneous deconvolution analysis of UV-vis absorption and MCD spectra reveal that (i) the amplitude of the magnetoplasmonic component with lower frequency (ω-), resulting from the reduction in the confinement strength of collective electrons by the Lorentz force, is stronger than that with a higher frequency (ω+) (ii) the accurate shift or cyclotron frequency between two magnetoplasmonic modes (ωc = ω+ - ω-) is size-dependent, and presents a very large value with implications for the apparent enhancement of the local magnetic-field in the Ag nanoparticles. These results strongly suggest that the Ag-thiolate layer or Ag-S bonding on the nanoparticle surface plays a significant role in the MO enhancement.Large magneto-optical (MO) responses at the energy of localized surface plasmon resonance (LSPR), namely, surface magnetoplasmons, are demonstrated for the first time in thiolate-protected silver nanoparticles with magnetic circular dichroism (MCD) spectroscopy. The samples examined are decanethiol (DT)-, azobenzenethiol (ABT)-, and ABT/DT mixed-monolayer-protected Ag nanoparticles. ABT-protected Ag nanoparticles are somewhat aggregated and thus exhibit a broad, collective mode of plasmonic absorption, whereas other samples with highly-dispersed nanoparticles show an individual mode of LSPR absorption. In all Ag nanoparticles, a derivative-like MCD signal is observed under an applied magnetic field of 1.6 T, which can be explained in terms of two circular modes of magnetoplasmon caused by the increase (or decrease) in the Lorentz force imparted on the free electrons that oscillate in the left (or right) circular orbits in the nanosphere. For the Ag nanoparticles exhibiting an individual LSPR mode, in particular, simultaneous deconvolution analysis of UV-vis absorption and MCD spectra reveal that (i) the amplitude of the magnetoplasmonic component with lower frequency (ω-), resulting from the reduction in the confinement strength of collective electrons by the Lorentz force, is stronger than that with a higher frequency (ω+) (ii) the accurate shift or cyclotron frequency between two magnetoplasmonic modes (ωc = ω+ - ω-) is size-dependent, and presents a very large value with implications for the apparent enhancement of the local magnetic-field in the Ag nanoparticles. These results strongly suggest that the Ag-thiolate layer or Ag-S bonding on the nanoparticle surface plays a significant role in the MO enhancement. Electronic supplementary information (ESI) available: EDX spectroscopic analysis of various Ag nanoparticle samples; MCD signals normalized to absorbance for the Ag(DT)L and Ag(DT)S samples; deconvolution of UV-vis absorption and MCD spectra using three Lorentzian components; IR spectral changes upon photoisomerization; thermal cis-to-trans relaxation of azobenzene in the Ag(ABT) sample; UV-vis absorption spectra of Ag nanoparticle samples in the presence/absence of a magnetic field of 1.6 T. See DOI: 10.1039/c6nr00631k
Malonyl-CoA decarboxylase (MCD) is differentially regulated in subcellular compartments by 5'AMP-activated protein kinase (AMPK). Studies using H9c2 cells overexpressing MCD and AMPK by adenoviral gene transfer technique.

PubMed

Sambandam, Nandakumar; Steinmetz, Michael; Chu, Angel; Altarejos, Judith Y; Dyck, Jason R B; Lopaschuk, Gary D

2004-07-01

Malonyl-CoA, a potent inhibitor of carnitine pamitoyl transferase-I (CPT-I), plays a pivotal role in fuel selection in cardiac muscle. Malonyl-CoA decarboxylase (MCD) catalyzes the degradation of malonyl-CoA, removes a potent allosteric inhibition on CPT-I and thereby increases fatty acid oxidation in the heart. Although MCD has several Ser/Thr phosphorylation sites, whether it is regulated by AMP-activated protein kinase (AMPK) has been controversial. We therefore overexpressed MCD (Ad.MCD) and constitutively active AMPK (Ad.CA-AMPK) in H9c2 cells, using an adenoviral gene delivery approach in order to examine if MCD is regulated by AMPK. Cells infected with Ad.CA-AMPK demonstrated a fourfold increase in AMPK activity as compared with control cells expressing green fluorescent protein (Ad.GFP). MCD activity increased 40- to 50-fold in Ad.MCD + Ad.GFP cells when compared with Ad.GFP control. Co-expressing AMPK with MCD further augmented MCD expression and activity in Ad.MCD + Ad.CA-AMPK cells compared with the Ad.MCD + Ad.GFP control. Subcellular fractionation further revealed that 54.7 kDa isoform of MCD expression was significantly higher in cytosolic fractions of Ad.MCD + Ad.CA-AMPK cells than of the Ad.MCD +Ad.GFP control. However, the MCD activities in cytosolic fractions were not different between the two groups. Interestingly, in the mitochondrial fractions, MCD activity significantly increased in Ad.MCD + Ad.CA-AMPK cells when compared with Ad.MCD + Ad.GFP cells. Using phosphoserine and phosphothreonine antibodies, no phosphorylation of MCD by AMPK was observed. The increase in MCD activity in mitochondria-rich fractions of Ad.MCD + Ad.CA-AMPK cells was accompanied by an increase in the level of the 50.7 kDa isoform of MCD protein in the mitochondria. This differential regulation of MCD expression and activity in the mitochondria by AMPK may potentially regulate malonyl-CoA levels at sites nearby CPT-I on the mitochondria.
Pathophysiology, Evaluation, and Management of Edema in Childhood Nephrotic Syndrome.

PubMed

Ellis, Demetrius

2015-01-01

Generalized edema is a major presenting clinical feature of children with nephrotic syndrome (NS) exemplified by such primary conditions as minimal change disease (MCD). In these children with classical NS and marked proteinuria and hypoalbuminemia, the ensuing tendency to hypovolemia triggers compensatory physiological mechanisms, which enhance renal sodium (Na(+)) and water retention; this is known as the "underfill hypothesis." Edema can also occur in secondary forms of NS and several other glomerulonephritides, in which the degree of proteinuria and hypoalbuminemia, are variable. In contrast to MCD, in these latter conditions, the predominant mechanism of edema formation is "primary" or "pathophysiological," Na(+) and water retention; this is known as the "overfill hypothesis." A major clinical challenge in children with these disorders is to distinguish the predominant mechanism of edema formation, identify other potential contributing factors, and prevent the deleterious effects of diuretic regimens in those with unsuspected reduced effective circulatory volume (i.e., underfill). This article reviews the Starling forces that become altered in NS so as to tip the balance of fluid movement in favor of edema formation. An understanding of these pathomechanisms then serves to formulate a more rational approach to prevention, evaluation, and management of such edema.
Mutations in the FMN domain modulate MCD spectra of the heme site in the oxygenase domain of inducible nitric oxide synthase.

PubMed

Sempombe, Joseph; Elmore, Bradley O; Sun, Xi; Dupont, Andrea; Ghosh, Dipak K; Guillemette, J Guy; Kirk, Martin L; Feng, Changjian

2009-05-27

The nitric oxide synthase (NOS) output state for NO production is a complex of the flavin mononucleotide (FMN)-binding domain and the heme domain, and thereby it facilitates the interdomain electron transfer from the FMN to the catalytic heme site. Emerging evidence suggests that interdomain FMN-heme interactions are important in the formation of the output state because they guide the docking of the FMN domain to the heme domain. In this study, notable effects of mutations in the adjacent FMN domain on the heme structure in a human iNOS bidomain oxygenase/FMN construct have been observed by using low-temperature magnetic circular dichroism (MCD) spectroscopy. The comparative MCD study of wild-type and mutant proteins clearly indicates that a properly docked FMN domain contributes to the observed L-Arg perturbation of the heme MCD spectrum in the wild-type protein and that the conserved surface residues in the FMN domain (E546 and E603) play key roles in facilitating a productive alignment of the FMN and heme domains in iNOS.
CD and MCD studies of the effects of component B variant binding on the biferrous active site of methane monooxygenase.

PubMed

Mitić, Natasa; Schwartz, Jennifer K; Brazeau, Brian J; Lipscomb, John D; Solomon, Edward I

2008-08-12

The multicomponent soluble form of methane monooxygenase (sMMO) catalyzes the oxidation of methane through the activation of O 2 at a nonheme biferrous center in the hydroxylase component, MMOH. Reactivity is limited without binding of the sMMO effector protein, MMOB. Past studies show that mutations of specific MMOB surface residues cause large changes in the rates of individual steps in the MMOH reaction cycle. To define the structural and mechanistic bases for these observations, CD, MCD, and VTVH MCD spectroscopies coupled with ligand-field (LF) calculations are used to elucidate changes occurring near and at the MMOH biferrous cluster upon binding of MMOB and the MMOB variants. Perturbations to both the CD and MCD are observed upon binding wild-type MMOB and the MMOB variant that similarly increases O 2 reactivity. MMOB variants that do not greatly increase O 2 reactivity fail to cause one or both of these changes. LF calculations indicate that reorientation of the terminal glutamate on Fe2 reproduces the spectral perturbations in MCD. Although this structural change allows O 2 to bridge the diiron site and shifts the redox active orbitals for good overlap, it is not sufficient for enhanced O 2 reactivity of the enzyme. Binding of the T111Y-MMOB variant to MMOH induces the MCD, but not CD changes, and causes only a small increase in reactivity. Thus, both the geometric rearrangement at Fe2 (observed in MCD) coupled with a more global conformational change that may control O 2 access (probed by CD), induced by MMOB binding, are critical factors in the reactivity of sMMO.

The Schaake shuffle: A method for reconstructing space-time variability in forecasted precipitation and temperature fields

USGS Publications Warehouse

Clark, M.R.; Gangopadhyay, S.; Hay, L.; Rajagopalan, B.; Wilby, R.

2004-01-01

A number of statistical methods that are used to provide local-scale ensemble forecasts of precipitation and temperature do not contain realistic spatial covariability between neighboring stations or realistic temporal persistence for subsequent forecast lead times. To demonstrate this point, output from a global-scale numerical weather prediction model is used in a stepwise multiple linear regression approach to downscale precipitation and temperature to individual stations located in and around four study basins in the United States. Output from the forecast model is downscaled for lead times up to 14 days. Residuals in the regression equation are modeled stochastically to provide 100 ensemble forecasts. The precipitation and temperature ensembles from this approach have a poor representation of the spatial variability and temporal persistence. The spatial correlations for downscaled output are considerably lower than observed spatial correlations at short forecast lead times (e.g., less than 5 days) when there is high accuracy in the forecasts. At longer forecast lead times, the downscaled spatial correlations are close to zero. Similarly, the observed temporal persistence is only partly present at short forecast lead times. A method is presented for reordering the ensemble output in order to recover the space-time variability in precipitation and temperature fields. In this approach, the ensemble members for a given forecast day are ranked and matched with the rank of precipitation and temperature data from days randomly selected from similar dates in the historical record. The ensembles are then reordered to correspond to the original order of the selection of historical data. Using this approach, the observed intersite correlations, intervariable correlations, and the observed temporal persistence are almost entirely recovered. This reordering methodology also has applications for recovering the space-time variability in modeled streamflow. ?? 2004 American Meteorological Society.
The Sterilization Effect of Cooperative Treatment of High Voltage Electrostatic Field and Variable Frequency Pulsed Electromagnetic Field on Heterotrophic Bacteria in Circulating Cooling Water

NASA Astrophysics Data System (ADS)

Gao, Xuetong; Liu, Zhian; Zhao, Judong

2018-01-01

Compared to other treatment of industrial circulating cooling water in the field of industrial water treatment, high-voltage electrostatic field and variable frequency pulsed electromagnetic field co-sterilization technology, an advanced technology, is widely used because of its special characteristics--low energy consumption, nonpoisonous and environmentally friendly. In order to get a better cooling water sterilization effect under the premise of not polluting the environment, some experiments about sterilization of heterotrophic bacteria in industrial circulating cooling water by cooperative treatment of high voltage electrostatic field and variable frequency pulsed electromagnetic field were carried out. The comparison experiment on the sterilization effect of high-voltage electrostatic field and variable frequency pulsed electromagnetic field co-sterilization on heterotrophic bacteria in industrial circulating cooling water was carried out by change electric field strength and pulse frequency. The results show that the bactericidal rate is selective to the frequency and output voltage, and the heterotrophic bacterium can only kill under the condition of sweep frequency range and output voltage. When the voltage of the high voltage power supply is 4000V, the pulse frequency is 1000Hz and the water temperature is 30°C, the sterilization rate is 48.7%, the sterilization rate is over 90%. Results of this study have important guiding significance for future application of magnetic field sterilization.
Changes In The Heating Degree-days In Norway Due Toglobal Warming

NASA Astrophysics Data System (ADS)

Skaugen, T. E.; Tveito, O. E.; Hanssen-Bauer, I.

A continuous spatial representation of temperature improves the possibility topro- duce maps of temperature-dependent variables. A temperature scenario for the period 2021-2050 is obtained for Norway from the Max-Planck-Institute? AOGCM, GSDIO ECHAM4/OPEC 3. This is done by an ?empirical downscaling method? which in- volves the use of empirical links between large-scale fields and local variables to de- duce estimates of the local variables. The analysis is obtained at forty-six sites in Norway. Spatial representation of the anomalies of temperature in the scenario period compared to the normal period (1961-1990) is obtained with the use of spatial interpo- lation in a GIS. The temperature scenario indicates that we will have a warmer climate in Norway in the future, especially during the winter season. The heating degree-days (HDD) is defined as the accumulated Celsius degrees be- tween the daily mean temperature and a threshold temperature. For Scandinavian countries, this threshold temperature is 17 Celsius degrees. The HDD is found to be a good estimate of accumulated cold. It is therefore a useful index for heating energy consumption within the heating season, and thus to power production planning. As a consequence of the increasing temperatures, the length of the heating season and the HDD within this season will decrease in Norway in the future. The calculations of the heating season and the HDD is estimated at grid level with the use of a GIS. The spatial representation of the heating season and the HDD can then easily be plotted. Local information of the variables being analysed can be withdrawn from the spatial grid in a GIS. The variable is prepared for further spatial analysis. It may also be used as an input to decision making systems.
Synoptic variability in the nudged version of LMDZ over the West African monsoon region during the AMMA campaign.

NASA Astrophysics Data System (ADS)

Ly, M.; Roca, R.; Hourdin, F.

2009-04-01

The Laboratoire de Météorologie Dynamique General circulation Model (LMDz) is ran in a nudged mode using various sets of atmospheric analysis during the wet season of 2006. The zoom capability of the model is used and reaches a mesh size of around 80km over the whole West African region. Sensitivity experiments have been performed in order to highlight the behaviour of the nudged model under a wide range of conditions: spatial and vertical resolution, zoom intensity, surface scheme formulation as well as for the forcing and driving parameters: relaxation time, type of analysis (ECMWF, NCEP/GFS, Sea Surface Temperature (climatology vs. 2006) and the nudging variables (wind, temperature, and combination). A combination of satellite data (E.g., GPCP rain estimates, METEOSAT Free tropospheric humidity,…) and in-situ observations acquired during the AMMA campaign (temperature and humidity profiles from radiosondes, GPS precipitable water,…) are all used to evaluate the simulations. The analysis is focused on the representation of the synoptic variability by the model in terms of rainfall and water vapour variability. It is shown that the model captures the free troposphere water vapour variability reasonably well with highly significant correlations between the radiosondes and the simulated fields. In the lowest levels of the atmosphere and in the upper troposphere, the agreement is less good. When the fields are filtered using a pass-band filter between 3-10 days, the correlation overall increases. Detailed of the sensitivity of these results to the simulation configuration mentioned above will be further discussed at the conference.
Understanding cirrus ice crystal number variability for different heterogeneous ice nucleation spectra

DOE PAGES

Sullivan, Sylvia C.; Morales Betancourt, Ricardo; Barahona, Donifan; ...

2016-03-03

Along with minimizing parameter uncertainty, understanding the cause of temporal and spatial variability of the nucleated ice crystal number, N i, is key to improving the representation of cirrus clouds in climate models. To this end, sensitivities of N i to input variables like aerosol number and diameter provide valuable information about nucleation regime and efficiency for a given model formulation. Here we use the adjoint model of the adjoint of a cirrus formation parameterization (Barahona and Nenes, 2009b) to understand N i variability for various ice-nucleating particle (INP) spectra. Inputs are generated with the Community Atmosphere Model version 5, andmore » simulations are done with a theoretically derived spectrum, an empirical lab-based spectrum and two field-based empirical spectra that differ in the nucleation threshold for black carbon particles and in the active site density for dust. The magnitude and sign of N i sensitivity to insoluble aerosol number can be directly linked to nucleation regime and efficiency of various INP. The lab-based spectrum calculates much higher INP efficiencies than field-based ones, which reveals a disparity in aerosol surface properties. In conclusion, N i sensitivity to temperature tends to be low, due to the compensating effects of temperature on INP spectrum parameters; this low temperature sensitivity regime has been experimentally reported before but never deconstructed as done here.« less
Coronal energy distribution and X-ray activity in the small scale magnetic field of the quiet sun

NASA Technical Reports Server (NTRS)

Habbal, S. R.

1992-01-01

The energy distribution in the small-scale magnetic field that pervades the solar surface, and its relationship to X-ray/coronal activity are discussed. The observed emission from the small scale structures, at temperatures characteristic of the chromosphere, transition region and corona, emanates from the boundaries of supergranular cells, within coronal bright points. This emission is characterized by a strong temporal and spatial variability with no definite pattern. The analysis of simultaneous, multiwavelength EUV observations shows that the spatial density of the enhanced as well as variable emission from the small scale structures exhibits a pronounced temperature dependence with significant maxima at 100,000 and 1,000,000 K. Within the limits of the spatial (1-5 arcsec) and temporal (1-5 min) resolution of data available at present, the observed variability in the small scale structure cannot account for the coroal heating of the quiet sun. The characteristics of their emission are more likely to be an indicator of the coronal heating mechanisms.
Using nudging to improve global-regional dynamic consistency in limited-area climate modeling: What should we nudge?

NASA Astrophysics Data System (ADS)

Omrani, Hiba; Drobinski, Philippe; Dubos, Thomas

2015-03-01

Regional climate modelling sometimes requires that the regional model be nudged towards the large-scale driving data to avoid the development of inconsistencies between them. These inconsistencies are known to produce large surface temperature and rainfall artefacts. Therefore, it is essential to maintain the synoptic circulation within the simulation domain consistent with the synoptic circulation at the domain boundaries. Nudging techniques, initially developed for data assimilation purposes, are increasingly used in regional climate modeling and offer a workaround to this issue. In this context, several questions on the "optimal" use of nudging are still open. In this study we focus on a specific question which is: What variable should we nudge? in order to maintain the consistencies between the regional model and the driving fields as much as possible. For that, a "Big Brother Experiment", where a reference atmospheric state is known, is conducted using the weather research and forecasting (WRF) model over the Euro-Mediterranean region. A set of 22 3-month simulations is performed with different sets of nudged variables and nudging options (no nudging, indiscriminate nudging, spectral nudging) for summer and winter. The results show that nudging clearly improves the model capacity to reproduce the reference fields. However the skill scores depend on the set of variables used to nudge the regional climate simulations. Nudging the tropospheric horizontal wind is by far the key variable to nudge to simulate correctly surface temperature and wind, and rainfall. To a lesser extent, nudging tropospheric temperature also contributes to significantly improve the simulations. Indeed, nudging tropospheric wind or temperature directly impacts the simulation of the tropospheric geopotential height and thus the synoptic scale atmospheric circulation. Nudging moisture improves the precipitation but the impact on the other fields (wind and temperature) is not significant. As an immediate consequence, nudging tropospheric wind, temperature and moisture in WRF gives by far the best results with respect to the Big-Brother simulation. However, we noticed that a residual bias of the geopotential height persists due to a negative surface pressure anomaly which suggests that surface pressure is the missing quantity to nudge. Nudging the geopotential has no discernible effect. Finally, it should be noted that the proposed strategy ensures a dynamical consistency between the driving field and the simulated small-scale field but it does not ensure the best "observed" fine scale field because of the possible impact of incorrect driving large-scale field.
Investigation of Dynamics in BMIM TFSA Ionic Liquid through Variable Temperature and Pressure NMR Relaxometry and Diffusometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pilar, Kartik; Rua, Armando; Suarez, Sophia N.

A comprehensive variable temperature, pressure and frequency multinuclear ( 1H, 2H, and 19F) magnetic resonance study was undertaken on selectively deuterated 1-butyl-3-methylimidazolium bis(trifluoromethylsulfonyl)amide (BMIM TFSA) ionic liquid isotopologues. This study builds on our earlier investigation of the effects of increasing alkyl chain length on diffusion and dynamics in imidazolium-based TFSA ionic liquids. Fast field cycling 1H T 1 data revealed multiple modes of motion. Through calculation of diffusion coefficient (D) values and activation energies, the low- and high-field regimes were assigned to the translational and reorientation dynamics respectively. Variable-pressure 2H T 1 measurements reveal site-dependent interactions in the cation withmore » strengths in the order MD 3 > CD 3 > CD 2, indicating dissimilarities in the electric field gradients along the alkyl chain, with the CD 2 sites having the largest gradient. Additionally, the α saturation effect in T 1 vs. P was observed for all three sites, suggesting significant reduction of the short-range rapid reorientational dynamics. This reduction was also deduced from the variable pressure 1H T 1 data, which showed an approach to saturation for both the methyl and butyl group terminal methyl sites. Pressure-dependent D measurements show independent motions for both cations and anions, with the cations having greater D values over the entire pressure range.« less
Investigation of Dynamics in BMIM TFSA Ionic Liquid through Variable Temperature and Pressure NMR Relaxometry and Diffusometry

DOE PAGES

Pilar, Kartik; Rua, Armando; Suarez, Sophia N.; ...

2017-05-11

A comprehensive variable temperature, pressure and frequency multinuclear ( 1H, 2H, and 19F) magnetic resonance study was undertaken on selectively deuterated 1-butyl-3-methylimidazolium bis(trifluoromethylsulfonyl)amide (BMIM TFSA) ionic liquid isotopologues. This study builds on our earlier investigation of the effects of increasing alkyl chain length on diffusion and dynamics in imidazolium-based TFSA ionic liquids. Fast field cycling 1H T 1 data revealed multiple modes of motion. Through calculation of diffusion coefficient (D) values and activation energies, the low- and high-field regimes were assigned to the translational and reorientation dynamics respectively. Variable-pressure 2H T 1 measurements reveal site-dependent interactions in the cation withmore » strengths in the order MD 3 > CD 3 > CD 2, indicating dissimilarities in the electric field gradients along the alkyl chain, with the CD 2 sites having the largest gradient. Additionally, the α saturation effect in T 1 vs. P was observed for all three sites, suggesting significant reduction of the short-range rapid reorientational dynamics. This reduction was also deduced from the variable pressure 1H T 1 data, which showed an approach to saturation for both the methyl and butyl group terminal methyl sites. Pressure-dependent D measurements show independent motions for both cations and anions, with the cations having greater D values over the entire pressure range.« less
Estimating the impact of internal climate variability on ice sheet model simulations

NASA Astrophysics Data System (ADS)

Tsai, C. Y.; Forest, C. E.; Pollard, D.

2016-12-01

Rising sea level threatens human societies and coastal habitats and melting ice sheets are a major contributor to sea level rise (SLR). Thus, understanding uncertainty of both forcing and variability within the climate system is essential for assessing long-term risk of SLR given their impact on ice sheet evolution. The predictability of polar climate is limited by uncertainties from the given forcing, the climate model response to this forcing, and the internal variability from feedbacks within the fully coupled climate system. Among those sources of uncertainty, the impact of internal climate variability on ice sheet changes has not yet been robustly assessed. Here we investigate how internal variability affects ice sheet projections using climate fields from two Community Earth System Model (CESM) large-ensemble (LE) experiments to force a three-dimensional ice sheet model. Each ensemble member in an LE experiment undergoes the same external forcings but with unique initial conditions. We find that for both LEs, 2m air temperature variability over Greenland ice sheet (GrIS) can lead to significantly different ice sheet responses. Our results show that the internal variability from two fully coupled CESM LEs can cause about 25 35 mm differences of GrIS's contribution to SLR in 2100 compared to present day (about 20% of the total change), and 100m differences of SLR in 2300. Moreover, only using ensemble-mean climate fields as the forcing in ice sheet model can significantly underestimate the melt of GrIS. As the Arctic region becomes warmer, the role of internal variability is critical given the complex nonlinear interactions between surface temperature and ice sheet. Our results demonstrate that internal variability from coupled atmosphere-ocean general circulation model can affect ice sheet simulations and the resulting sea-level projections. This study highlights an urgent need to reassess associated uncertainties of projecting ice sheet loss over the next few centuries to obtain robust estimates of the contribution of ice sheet melt to SLR.
An Engineering Approach to the Variable Fluid Property Problem in Free Convection

NASA Technical Reports Server (NTRS)

Gregg, J. L.; Sparrow, E. M.

1956-01-01

An analysis is made for the variable fluid property problem for laminar free convection on an isothermal vertical flat plate. For a number of specific cases, solutions of the boundary layer equations appropriate to the variable property situation were carried out for gases and liquid mercury. Utilizing these findings, a simple and accurate shorthand procedure is presented for calculating free convection heat transfer under variable property conditions. This calculation method is well established in the heat transfer field. It involves the use of results which have been derived for constant property fluids, and of a set of rules (called reference temperatures) for extending these constant property results to variable property situations. For gases, the constant property heat transfer results are generalized to the variable property situation by replacing beta (expansion coefficient) by one over T sub infinity and evaluating the other properties at T sub r equals T sub w minus zero point thirty-eight (T sub w minus T sub infinity). For liquid mercury, the generalization may be accomplished by evaluating all the properties (including beta) at this same T sub r. It is worthwhile noting that for these fluids, the film temperature (with beta equals one over T sub infinity for gases) appears to serve as an adequate reference temperature for most applications. Results are also presented for boundary layer thickness and velocity parameters.
Chemically reactive species in squeezed flow through modified Fourier's and Fick's laws

NASA Astrophysics Data System (ADS)

Farooq, M.; Ahmad, S.; Javed, M.; Anjum, Aisha

2018-02-01

The squeezing flow of a Newtonian fluid with variable viscosity over a stretchable sheet embedded in Darcy porous medium is addressed. Cattaneo-Christov double diffusion models are adopted to disclose the salient features of heat and mass transport via variable thermal conductivity and variable mass diffusivity instead of conventional Fourier's and Fick's laws. Further, the concept of heat generation/absorption coefficient and first-order chemical reaction are also imposed to illustrate the characteristics of heat and mass transfer. Highly nonlinear computations are developed in dimensionless form and analyzed via the homotopic technique. The variation of flow parameters on velocity, concentration, and temperature distributions are sketched and disclosed physically. The results found that both concentration and temperature distributions decay for higher solutal and thermal relaxation parameters, respectively. Moreover, a higher chemical reaction parameter results in the reduction of the concentration field whereas the temperature profile enhances for a higher heat generation/absorption parameter.
Disease in a more variable and unpredictable climate

NASA Astrophysics Data System (ADS)

McMahon, T. A.; Raffel, T.; Rohr, J. R.; Halstead, N.; Venesky, M.; Romansic, J.

2014-12-01

Global climate change is shifting the dynamics of infectious diseases of humans and wildlife with potential adverse consequences for disease control. Despite this, the role of global climate change in the decline of biodiversity and the emergence of infectious diseases remains controversial. Climate change is expected to increase climate variability in addition to increasing mean temperatures, making climate less predictable. However, few empirical or theoretical studies have considered the effects of climate variability or predictability on disease, despite it being likely that hosts and parasites will have differential responses to climatic shifts. Here we present a theoretical framework for how temperature variation and its predictability influence disease risk by affecting host and parasite acclimation responses. Laboratory experiments and field data on disease-associated frog declines in Latin America support this framework and provide evidence that unpredictable temperature fluctuations, on both monthly and diurnal timescales, decrease frog resistance to the pathogenic chytrid fungus Batrachochytrium dendrobatidis (Bd). Furthermore, the pattern of temperature-dependent growth of the fungus on frogs was inconsistent with the pattern of Bd growth in culture, emphasizing the importance of accounting for the host-parasite interaction when predicting climate-dependent disease dynamics. Consistent with our laboratory experiments, increased regional temperature variability associated with global El Niño climatic events was the best predictor of widespread amphibian losses in the genus Atelopus. Thus, incorporating the effects of small-scale temporal variability in climate can greatly improve our ability to predict the effects of climate change on disease.
Impact of Subsurface Temperature Variability on Meteorological Variability: An AGCM Study

NASA Astrophysics Data System (ADS)

Mahanama, S. P.; Koster, R. D.; Liu, P.

2006-05-01

Anomalous atmospheric conditions can lead to surface temperature anomalies, which in turn can lead to temperature anomalies deep in the soil. The deep soil temperature (and the associated ground heat content) has significant memory -- the dissipation of a temperature anomaly may take weeks to months -- and thus deep soil temperature may contribute to the low frequency variability of energy and water variables elsewhere in the system. The memory may even provide some skill to subseasonal and seasonal forecasts. This study uses two long-term AGCM experiments to isolate the contribution of deep soil temperature variability to variability elsewhere in the climate system. The first experiment consists of a standard ensemble of AMIP-type simulations, simulations in which the deep soil temperature variable is allowed to interact with the rest of the system. In the second experiment, the coupling of the deep soil temperature to the rest of the climate system is disabled -- at each grid cell, the local climatological seasonal cycle of deep soil temperature (as determined from the first experiment) is prescribed. By comparing the variability of various atmospheric quantities as generated in the two experiments, we isolate the contribution of interactive deep soil temperature to that variability. The results show that interactive deep soil temperature contributes significantly to surface temperature variability. Interactive deep soil temperature, however, reduces the variability of the hydrological cycle (evaporation and precipitation), largely because it allows for a negative feedback between evaporation and temperature.
Computation of laminar heat transfer from gaseous plasmas in electromagnetic fields

NASA Technical Reports Server (NTRS)

Bose, T. K.

1972-01-01

Heat transfer analysis procedure is presented for two-temperature gaseous plasma. Analysis is based on laminar flow of singly-ionized, quasineutral plasma with variable properties. Sheath analysis is described for species in accelerating field, decelerating field, emitted from wall, and recombining at wall.
Managers' views on and experiences with moral case deliberation in nursing teams.

PubMed

Weidema, Froukje C; Molewijk, A C Bert; Kamsteeg, Frans; Widdershoven, Guy A M

2015-11-01

Providing management insights regarding moral case deliberation (MCD) from the experiential perspective of nursing managers. MCD concerns systematic group-wise reflection on ethical issues. Attention to implementing MCD in health care is increasing, and managers' experiences regarding facilitating MCD's implementation have not yet been studied. As part of an empirical qualitative study on implementing MCD in mental health care, a responsive evaluation design was used. Using former research findings (iterative procedures), a managers' focus group was organised. Managers appreciated MCD, fostering nurses' empowerment and critical reflection - according to managers, professional core competences. Managers found MCD a challenging intervention, resulting in dilemmas due to MCD's confidential and egalitarian nature. Managers value MCD's process-related outcomes, yet these are difficult to control/regulate. MCD urges managers to reflect on their role and (hierarchical) position both within MCD and in the nursing team. MCD is in line with transformative and participatory management, fostering dialogical interaction between management and nursing team. © 2015 John Wiley & Sons Ltd.
The mortality burden of hourly temperature variability in five capital cities, Australia: Time-series and meta-regression analysis.

PubMed

Cheng, Jian; Xu, Zhiwei; Bambrick, Hilary; Su, Hong; Tong, Shilu; Hu, Wenbiao

2017-12-01

Unstable weather, such as intra- and inter-day temperature variability, can impair the health and shorten the survival time of population around the world. Climate change will cause Earth's surface temperature rise, but has unclear effects on temperature variability, making it urgent to understand the characteristics of the burden of temperature variability on mortality, regionally and nationally. This paper aims to quantify the mortality risk of exposure to short-term temperature variability, estimate the resulting death toll and explore how the strength of temperature variability effects will vary as a function of city-level characteristics. Ten-year (2000-2009) time-series data on temperature and mortality were collected for five largest Australia's cities (Sydney, Melbourne, Brisbane, Perth and Adelaide), collectively registering 708,751 deaths in different climates. Short-term temperature variability was captured and represented as the hourly temperature standard deviation within two days. Three-stage analyses were used to assess the burden of temperature variability on mortality. First, we modelled temperature variability-mortality relation and estimated the relative risk of death for each city, using a time-series quasi-Poisson regression model. Second, we used meta-analysis to pool the city-specific estimates, and meta-regression to explore if some city-level factors will modify the population vulnerability to temperature variability. Finally, we calculated the city-specific deaths attributable to temperature variability, and applied such estimates to the whole of Australia as a reflection of the nation-wide death burden associated with temperature variability. We found evidence of significant associations between temperature variability and mortality in all cities assessed. Deaths associated with each 1°C rise in temperature variability elevated by 0.28% (95% confidence interval (CI): 0.05%, 0.52%) in Melbourne to 1.00% (95%CI: 0.52%, 1.48%) in Brisbane, with a pooled estimate of 0.51% (95%CI: 0.33%, 0.69%) for Australia. Subtropical and temperate regions showed no apparent difference in temperature variability impacts. Meta-regression analyses indicated that the mortality risk could be influenced by city-specific factors: latitude, mean temperature, population density and the prevalence of several chronic diseases. Taking account of contributions from the entire time-series, temperature variability was estimated to account for 0.99% to 3.24% of deaths across cities, with a nation-wide attributable fraction of 1.67% (9.59 deaths per 100, 000 population per year). Hourly temperature variability may be an important risk factor of weather-related deaths and led to a sizeable mortality burden. This study underscores the need for developing specific and effective interventions in Australia to lessen the health consequences of temperature variability. Copyright © 2017. Published by Elsevier Ltd.
New variable stars discovered in the fields of three Galactic open clusters using the VVV survey

NASA Astrophysics Data System (ADS)

Palma, T.; Minniti, D.; Dékány, I.; Clariá, J. J.; Alonso-García, J.; Gramajo, L. V.; Ramírez Alegría, S.; Bonatto, C.

2016-11-01

This project is a massive near-infrared (NIR) search for variable stars in highly reddened and obscured open cluster (OC) fields projected on regions of the Galactic bulge and disk. The search is performed using photometric NIR data in the J-, H- and Ks- bands obtained from the Vista Variables in the Vía Láctea (VVV) Survey. We performed in each cluster field a variability search using Stetson's variability statistics to select the variable candidates. Later, those candidates were subjected to a frequency analysis using the Generalized Lomb-Scargle and the Phase Dispersion Minimization algorithms. The number of independent observations range between 63 and 73. The newly discovered variables in this study, 157 in total in three different known OCs, are classified based on their light curve shapes, periods, amplitudes and their location in the corresponding color-magnitude (J -Ks ,Ks) and color-color (H -Ks , J - H) diagrams. We found 5 possible Cepheid stars which, based on the period-luminosity relation, are very likely type II Cepheids located behind the bulge. Among the newly discovered variables, there are eclipsing binaries, δ Scuti, as well as background RR Lyrae stars. Using the new version of the Wilson & Devinney code as well as the "Physics Of Eclipsing Binaries" (PHOEBE) code, we analyzed some of the best eclipsing binaries we discovered. Our results show that these studied systems turn out to be ranging from detached to double-contact binaries, with low eccentricities and high inclinations of approximately 80°. Their surface temperatures range between 3500 K and 8000 K.
Stress modulation of cellular metabolic sensors: interaction of stress from temperature and rainfall on the intertidal limpet Cellana toreuma.

PubMed

Dong, Yun-Wei; Han, Guo-Dong; Huang, Xiong-Wei

2014-09-01

In the natural environment, organisms are exposed to large variations in physical conditions. Quantifying such physiological responses is, however, often performed in laboratory acclimation studies, in which usually only a single factor is varied. In contrast, field acclimatization may expose organisms to concurrent changes in several environmental variables. The interactions of these factors may have strong effects on organismal function. In particular, rare events that occur stochastically and have relatively short duration may have strong effects. The present experiments studied levels of expression of several genes associated with cellular stress and metabolic regulation in a field population of limpet Cellana toreuma that encountered a wide range of temperatures plus periodic rain events. Physiological responses to these variable conditions were quantified by measuring levels of mRNA of genes encoding heat-shock proteins (Hsps) and metabolic sensors (AMPKs and Sirtuin 1). Our results reveal high ratios of individuals in upregulation group of stress-related gene expression at high temperature and rainy days, indicating the occurrence of stress from both prevailing high summer temperatures and occasional rainfall during periods of emersion. At high temperature, stress due to exposure to rainfall may be more challenging than heat stress alone. The highly variable physiological performances of limpets in their natural habitats indicate the possible differences in capability for physiological regulation among individuals. Our results emphasize the importance of studies of field acclimatization in unravelling the effects of environmental change on organisms, notably in the context of multiple changes in abiotic factors that are accompanying global change. © 2014 John Wiley & Sons Ltd.
Greenhouse warming, decadal variability, or El Nino? An attempt to understand the anomalous 1990s

DOE Office of Scientific and Technical Information (OSTI.GOV)

Latif, M.; Eckert, C.; Kleeman, R.

The dominant variability modes in the Tropics are investigated and contrasted with the anomalous situation observed during the last few years. The prime quantity analyzed is anomalous sea surface temperature (SST) in the region 30{degrees}S-60{degrees}N. Additionally, observed tropical surface wind stress fields were investigated. Further tropical atmospheric information was derived from a multidecadal run with an atmospheric general circulation model that was forced by the same SSTs. The tropical SST variability can be characterized by three modes: an interannual mode [the El Nino-Southern Oscillation (ENSO)], a decadal mode, and a trend or unresolved ultra-low-frequency variability. 48 refs., 20 figs.

Fuel temperature counter

Treesearch

John R. Murray; Charles W. Philpot

1963-01-01

Fuel temperature is and has always been difficult to measure. To understand better the problem of fire and fire weather behavior, it is important to measure this variable. We have developed for field use a new fuel temperature counter which can be used to obtain such measurements quickly and easily. This electronic recording instrument is easy to construct and operate...
Versatile variable temperature and magnetic field scanning probe microscope for advanced material research

NASA Astrophysics Data System (ADS)

Jung, Jin-Oh; Choi, Seokhwan; Lee, Yeonghoon; Kim, Jinwoo; Son, Donghyeon; Lee, Jhinhwan

2017-10-01

We have built a variable temperature scanning probe microscope (SPM) that covers 4.6 K-180 K and up to 7 T whose SPM head fits in a 52 mm bore magnet. It features a temperature-controlled sample stage thermally well isolated from the SPM body in good thermal contact with the liquid helium bath. It has a 7-sample-holder storage carousel at liquid helium temperature for systematic studies using multiple samples and field emission targets intended for spin-polarized spectroscopic-imaging scanning tunneling microscopy (STM) study on samples with various compositions and doping conditions. The system is equipped with a UHV sample preparation chamber and mounted on a two-stage vibration isolation system made of a heavy concrete block and a granite table on pneumatic vibration isolators. A quartz resonator (qPlus)-based non-contact atomic force microscope (AFM) sensor is used for simultaneous STM/AFM operation for research on samples with highly insulating properties such as strongly underdoped cuprates and strongly correlated electron systems.
A comparative analysis of rawinsonde and NIMBUS 6 and TIROS N satellite profile data

NASA Technical Reports Server (NTRS)

Scoggins, J. R.; Carle, W. E.; Knight, K.; Moyer, V.; Cheng, N. M.

1981-01-01

Comparisons are made between rawinsonde and satellite profiles in seven areas for a wide range of surface and weather conditions. Variables considered include temperature, dewpoint temperature, thickness, precipitable water, lapse rate of temperature, stability, geopotential height, mixing ratio, wind direction, wind speed, and kinematic parameters, including vorticity and the advection of vorticity and temperature. In addition, comparisons are made in the form of cross sections and synoptic fields for selected variables. Sounding data from the NIMBUS 6 and TIROS N satellites were used. Geostrophic wind computed from smoothed geopotential heights provided large scale flow patterns that agreed well with the rawinsonde wind fields. Surface wind patterns as well as magnitudes computed by use of the log law to extrapolate wind to a height of 10 m agreed with observations. Results of this study demonstrate rather conclusively that satellite profile data can be used to determine characteristics of large scale systems but that small scale features, such as frontal zones, cannot yet be resolved.
Improving Seasonal Crop Monitoring and Forecasting for Soybean and Corn in Iowa

NASA Astrophysics Data System (ADS)

Togliatti, K.; Archontoulis, S.; Dietzel, R.; VanLoocke, A.

2016-12-01

Accurately forecasting crop yield in advance of harvest could greatly benefit farmers, however few evaluations have been conducted to determine the effectiveness of forecasting methods. We tested one such method that used a combination of short-term weather forecasting from the Weather Research and Forecasting Model (WRF) to predict in season weather variables, such as, maximum and minimum temperature, precipitation and radiation at 4 different forecast lengths (2 weeks, 1 week, 3 days, and 0 days). This forecasted weather data along with the current and historic (previous 35 years) data from the Iowa Environmental Mesonet was combined to drive Agricultural Production Systems sIMulator (APSIM) simulations to forecast soybean and corn yields in 2015 and 2016. The goal of this study is to find the forecast length that reduces the variability of simulated yield predictions while also increasing the accuracy of those predictions. APSIM simulations of crop variables were evaluated against bi-weekly field measurements of phenology, biomass, and leaf area index from early and late planted soybean plots located at the Agricultural Engineering and Agronomy Research Farm in central Iowa as well as the Northwest Research Farm in northwestern Iowa. WRF model predictions were evaluated against observed weather data collected at the experimental fields. Maximum temperature was the most accurately predicted variable, followed by minimum temperature and radiation, and precipitation was least accurate according to RMSE values and the number of days that were forecasted within a 20% error of the observed weather. Our analysis indicated that for the majority of months in the growing season the 3 day forecast performed the best. The 1 week forecast came in second and the 2 week forecast was the least accurate for the majority of months. Preliminary results for yield indicate that the 2 week forecast is the least variable of the forecast lengths, however it also is the least accurate. The 3 day and 1 week forecast have a better accuracy, with an increase in variability.
Analysis of causal factors of fire regimes in Sub-Saharan Africa

NASA Astrophysics Data System (ADS)

Palumbo, I.; Lehsten, V.; Balzter, H.

2009-04-01

Wildfires are a wide spread global phenomenon. Their activity peaks in the tropical savannas, especially in the African continent, where fires are a key component of ecosystem dynamics. Fires affect the ecological balance between trees and grasses in savannas with concomitant effects on biodiversity, soil fertility and biogeochemical cycles. Large amounts of trace greenhouse gases and aerosols from wildfires are emitted each year in Africa, but the underlying dynamics of such wildfires and what drives them remain poorly understood. In general terms, the magnitude and the inter-annual variability of fire activity depend on fire frequency and its spatial distribution, also referred to as fire regimes. These are, in turn, determined by the environmental conditions at the time of burning, ignition sources, fuel type, fuel availability, and its moisture content. This study analysed the driving factors of fire regimes at continental level for a period of 5 years (2002-2007). We considered the following variables: climate (rainfall, temperature, humidity), population density, land cover and the burned areas derived from the MODIS MCD45A1 product at 500m resolution. GIS and multi-variate regression techniques were used to analyse the data. Understanding fire driving factors is fundamentally important for developing process-based simulation models of fire occurrence under future climate and environmental change scenarios. This is particularly relevant if we consider that the IPCC 4th Assessment report indicates that a change in the rainfall patterns has been observed in the last 40 years over most of Africa with a decrease of precipitation around 20-40% in West Africa and more intense and widespread droughts in Southern Africa. The simultaneous increase of temperatures can potentially lead to higher fire occurrence and modify the current fire regimes. This work contributes to climate change research with new insights and understanding about how fires are controlled by bioclimatic and demographic factors in African ecosystems.
Changes in field workability and drought risk from projected climate change drive spatially variable risks in Illinois cropping systems.

PubMed

Tomasek, Bradley J; Williams, Martin M; Davis, Adam S

2017-01-01

As weather patterns become more volatile and extreme, risks introduced by weather variability will become more critical to agricultural production. The availability of days suitable for field work is driven by soil temperature and moisture, both of which may be altered by climate change. We projected changes in Illinois season length, spring field workability, and summer drought risk under three different emissions scenarios (B1, A1B, and A2) down to the crop district scale. Across all scenarios, thermal time units increased in parallel with a longer frost-free season. An increase in late March and Early April field workability was consistent across scenarios, but a decline in overall April through May workable days was observed for many cases. In addition, summer drought metrics were projected to increase for most scenarios. These results highlight how the spatial and temporal variability in climate change may present unique challenges to mitigation and adaptation efforts.
Sensitivity of simulated Martian atmospheric temperature to prescribed dust opacity distribution: Comparison of model results with reconstructed data from Mars Exploration Rover missions

NASA Astrophysics Data System (ADS)

Natarajan, Murali; Dwyer Cianciolo, Alicia; Fairlie, T. Duncan; Richardson, Mark I.; McConnochie, Timothy H.

2015-11-01

We use the Mars Weather Research and Forecasting (MarsWRF) general circulation model to simulate the atmospheric structure corresponding to the landing location and time of the Mars Exploration Rovers (MER) Spirit (A) and Opportunity (B) in 2004. The multiscale capability of MarsWRF facilitates high-resolution nested model runs centered near the landing site of each of the rovers. Dust opacity distributions based on measurements by Thermal Emission Spectrometer (TES) aboard the Mars Global Surveyor spacecraft, and those from an old version of the Mars Climate Database (MCD v3.1 released in 2001) are used to study the sensitivity of the model temperature profile to variations in the dust prescription. The reconstructed entry, descent, and landing (EDL) data from the rover missions are used for comparisons. We show that the model using dust opacity from TES limb and nadir data for the year of MER EDL, Mars Year 26 (MY26), yields temperature profiles in closer agreement with the reconstructed data than the prelaunch EDL simulations and models using other dust opacity specifications. The temperature at 100 Pa from the model (MY26) and the reconstruction are within 5°K. These results highlight the role of vertical dust opacity distribution in determining the atmospheric thermal structure. Similar studies involving data from past missions and models will be useful in understanding the extent to which atmospheric variability is captured by the models and in developing realistic preflight characterization required for future lander missions to Mars.
Global patterns of declining temperature variability from the Last Glacial Maximum to the Holocene

NASA Astrophysics Data System (ADS)

Rehfeld, Kira; Münch, Thomas; Ho, Sze Ling; Laepple, Thomas

2018-02-01

Changes in climate variability are as important for society to address as are changes in mean climate. Contrasting temperature variability during the Last Glacial Maximum and the Holocene can provide insights into the relationship between the mean state of the climate and its variability. However, although glacial-interglacial changes in variability have been quantified for Greenland, a global view remains elusive. Here we use a network of marine and terrestrial temperature proxies to show that temperature variability decreased globally by a factor of four as the climate warmed by 3-8 degrees Celsius from the Last Glacial Maximum (around 21,000 years ago) to the Holocene epoch (the past 11,500 years). This decrease had a clear zonal pattern, with little change in the tropics (by a factor of only 1.6-2.8) and greater change in the mid-latitudes of both hemispheres (by a factor of 3.3-14). By contrast, Greenland ice-core records show a reduction in temperature variability by a factor of 73, suggesting influences beyond local temperature or a decoupling of atmospheric and global surface temperature variability for Greenland. The overall pattern of reduced variability can be explained by changes in the meridional temperature gradient, a mechanism that points to further decreases in temperature variability in a warmer future.
Global patterns of declining temperature variability from the Last Glacial Maximum to the Holocene.

PubMed

Rehfeld, Kira; Münch, Thomas; Ho, Sze Ling; Laepple, Thomas

2018-02-15

Changes in climate variability are as important for society to address as are changes in mean climate. Contrasting temperature variability during the Last Glacial Maximum and the Holocene can provide insights into the relationship between the mean state of the climate and its variability. However, although glacial-interglacial changes in variability have been quantified for Greenland, a global view remains elusive. Here we use a network of marine and terrestrial temperature proxies to show that temperature variability decreased globally by a factor of four as the climate warmed by 3-8 degrees Celsius from the Last Glacial Maximum (around 21,000 years ago) to the Holocene epoch (the past 11,500 years). This decrease had a clear zonal pattern, with little change in the tropics (by a factor of only 1.6-2.8) and greater change in the mid-latitudes of both hemispheres (by a factor of 3.3-14). By contrast, Greenland ice-core records show a reduction in temperature variability by a factor of 73, suggesting influences beyond local temperature or a decoupling of atmospheric and global surface temperature variability for Greenland. The overall pattern of reduced variability can be explained by changes in the meridional temperature gradient, a mechanism that points to further decreases in temperature variability in a warmer future.
Synthesis and characterization of the tetranuclear iron(III) complex of a new asymmetric multidentate ligand. A structural model for purple acid phosphatases.

PubMed

Boudalis, Athanassios K; Aston, Robyn E; Smith, Sarah J; Mirams, Ruth E; Riley, Mark J; Schenk, Gerhard; Blackman, Allan G; Hanton, Lyall R; Gahan, Lawrence R

2007-11-28

The ligand, 2-((2-hydroxy-5-methyl-3-((pyridin-2-ylmethylamino)methyl)benzyl)(2-hydroxybenzyl)amino)acetic acid (H(3)HPBA), which contains a donor atom set that mimics that of the active site of purple acid phosphatase is described. Reaction of H(3)HPBA with iron(III) or iron(II) salts results in formation of the tetranuclear complex, [Fe(4)(HPBA)(2)(OAc)(2)(mu-O)(mu-OH)(OH(2))(2)]ClO(4) x 5H(2)O. X-Ray structural analysis reveals the cation consists of four iron(III) ions, two HPBA(3-) ligands, two bridging acetate ligands, a bridging oxide ion and a bridging hydroxide ion. Each binucleating HPBA(3-) ligand coordinates two structurally distinct hexacoordinate iron(III) ions. The two metal ions coordinated to a HPBA(3-) ligand are linked to the two iron(III) metal ions of a second, similar binuclear unit by intramolecular oxide and hydroxide bridging moieties to form a tetramer. The complex has been further characterised by elemental analysis, mass spectrometry, UV-vis and MCD spectroscopy, X-ray crystallography, magnetic susceptibility measurements and variable-temperature Mössbauer spectroscopy.
Disease and thermal acclimation in a more variable and unpredictable climate

NASA Astrophysics Data System (ADS)

Raffel, Thomas R.; Romansic, John M.; Halstead, Neal T.; McMahon, Taegan A.; Venesky, Matthew D.; Rohr, Jason R.

2013-02-01

Global climate change is shifting the distribution of infectious diseases of humans and wildlife with potential adverse consequences for disease control. As well as increasing mean temperatures, climate change is expected to increase climate variability, making climate less predictable. However, few empirical or theoretical studies have considered the effects of climate variability or predictability on disease, despite it being likely that hosts and parasites will have differential responses to climatic shifts. Here we present a theoretical framework for how temperature variation and its predictability influence disease risk by affecting host and parasite acclimation responses. Laboratory experiments conducted in 80 independent incubators, and field data on disease-associated frog declines in Latin America, support the framework and provide evidence that unpredictable temperature fluctuations, on both monthly and diurnal timescales, decrease frog resistance to the pathogenic chytrid fungus Batrachochytrium dendrobatidis. Furthermore, the pattern of temperature-dependent growth of the fungus on frogs was opposite to the pattern of growth in culture, emphasizing the importance of accounting for the host-parasite interaction when predicting climate-dependent disease dynamics. If similar acclimation responses influence other host-parasite systems, as seems likely, then present models, which generally ignore small-scale temporal variability in climate, might provide poor predictions for climate effects on disease.
Insights on multivariate updates of physical and biogeochemical ocean variables using an Ensemble Kalman Filter and an idealized model of upwelling

NASA Astrophysics Data System (ADS)

Yu, Liuqian; Fennel, Katja; Bertino, Laurent; Gharamti, Mohamad El; Thompson, Keith R.

2018-06-01

Effective data assimilation methods for incorporating observations into marine biogeochemical models are required to improve hindcasts, nowcasts and forecasts of the ocean's biogeochemical state. Recent assimilation efforts have shown that updating model physics alone can degrade biogeochemical fields while only updating biogeochemical variables may not improve a model's predictive skill when the physical fields are inaccurate. Here we systematically investigate whether multivariate updates of physical and biogeochemical model states are superior to only updating either physical or biogeochemical variables. We conducted a series of twin experiments in an idealized ocean channel that experiences wind-driven upwelling. The forecast model was forced with biased wind stress and perturbed biogeochemical model parameters compared to the model run representing the "truth". Taking advantage of the multivariate nature of the deterministic Ensemble Kalman Filter (DEnKF), we assimilated different combinations of synthetic physical (sea surface height, sea surface temperature and temperature profiles) and biogeochemical (surface chlorophyll and nitrate profiles) observations. We show that when biogeochemical and physical properties are highly correlated (e.g., thermocline and nutricline), multivariate updates of both are essential for improving model skill and can be accomplished by assimilating either physical (e.g., temperature profiles) or biogeochemical (e.g., nutrient profiles) observations. In our idealized domain, the improvement is largely due to a better representation of nutrient upwelling, which results in a more accurate nutrient input into the euphotic zone. In contrast, assimilating surface chlorophyll improves the model state only slightly, because surface chlorophyll contains little information about the vertical density structure. We also show that a degradation of the correlation between observed subsurface temperature and nutrient fields, which has been an issue in several previous assimilation studies, can be reduced by multivariate updates of physical and biogeochemical fields.
From nanoelectronics to nano-spintronics.

PubMed

Wang, Kang L; Ovchinnikov, Igor; Xiu, Faxian; Khitun, Alex; Bao, Ming

2011-01-01

Today's electronics uses electron charge as a state variable for logic and computing operation, which is often represented as voltage or current. In this representation of state variable, carriers in electronic devices behave independently even to a few and single electron cases. As the scaling continues to reduce the physical feature size and to increase the functional throughput, two most outstanding limitations and major challenges, among others, are power dissipation and variability as identified by ITRS. This paper presents the expose, in that collective phenomena, e.g., spintronics using appropriate order parameters of magnetic moment as a state variable may be considered favorably for a new room-temperature information processing paradigm. A comparison between electronics and spintronics in terms of variability, quantum and thermal fluctuations will be presented. It shows that the benefits of the scalability to smaller sizes in the case of spintronics (nanomagnetics) include a much reduced variability problem as compared with today's electronics. In addition, another advantage of using nanomagnets is the possibility of constructing nonvolatile logics, which allow for immense power savings during system standby. However, most of devices with magnetic moment usually use current to drive the devices and consequently, power dissipation is a major issue. We will discuss approaches of using electric-field control of ferromagnetism in dilute magnetic semiconductor (DMS) and metallic ferromagnetic materials. With the DMSs, carrier-mediated transition from paramagnetic to ferromagnetic phases make possible to have devices work very much like field effect transistor, plus the non-volatility afforded by ferromagnetism. Then we will describe new possibilities of the use of electric field for metallic materials and devices: Spin wave devices with multiferroics materials. We will also further describe a potential new method of electric field control of metallic ferromagnetism via field effect of the Thomas Fermi surface layer.
The Effects of Betaine on the Nuclear Fractal Dimension, Chromatin Texture, and Proliferative Activity in Hepatocytes in Mouse Model of Nonalcoholic Fatty Liver Disease.

PubMed

Vesković, Milena; Labudović-Borović, Milica; Zaletel, Ivan; Rakočević, Jelena; Mladenović, Dušan; Jorgačević, Bojan; Vučević, Danijela; Radosavljević, Tatjana

2018-04-01

The effects of betaine on hepatocytes chromatin architecture changes were examined by using fractal and gray-level co-occurrence matrix (GLCM) analysis in methionine/choline-deficient (MCD) diet-induced, nonalcoholic fatty liver disease (NAFLD). Male C57BL/6 mice were divided into groups: (1) Control: standard diet; (2) BET: standard diet and betaine supplementation through drinking water (solution 1.5%); (3) MCD group: MCD diet for 6 weeks; (4) MCD+BET: fed with MCD diet + betaine for 6 weeks. Liver tissue was collected for histopathology, immunohistochemistry, and determination of fractal dimension and GLCM parameters. MCD diet induced diffuse micro- and macrovesicular steatosis accompanied with increased Ki67-positive hepatocyte nuclei. Steatosis and Ki67 immunopositivity were less prominent in the MCD+BET group compared with the MCD group. Angular second moment (ASM) and inverse difference moment (IDM) (textural homogeneity markers) were significantly increased in the MCD+BET group versus the MCD group (p<0.001), even though no difference between the MCD and the control group was evident. Heterogeneity parameters, contrast, and correlation were significantly increased in the MCD group versus the control (p<0.001). On the other hand, betaine treatment significantly reduced correlation, contrast, and entropy compared with the MCD group (p<0.001). Betaine attenuated MCD diet-induced NAFLD by reducing fat accumulation and inhibiting hepatocyte proliferation. Betaine supplementation increased nuclear homogeneity and chromatin complexity with reduction of entropy, contrast, and correlation.
Impact of some field factors on inhalation exposure levels to bitumen emissions during road paving operations.

PubMed

Deygout, François; Auburtin, Guy

2015-03-01

Variability in occupational exposure levels to bitumen emissions has been observed during road paving operations. This is due to recurrent field factors impacting the level of exposure experienced by workers during paving. The present study was undertaken in order to quantify the impact of such factors. Pre-identified variables currently encountered in the field were monitored and recorded during paving surveys, and were conducted randomly covering current applications performed by road crews. Multivariate variance analysis and regressions were then used on computerized field data. The statistical investigations were limited due to the relatively small size of the study (36 data). Nevertheless, the particular use of the step-wise regression tool enabled the quantification of the impact of several predictors despite the existing collinearity between variables. The two bitumen organic fractions (particulates and volatiles) are associated with different field factors. The process conditions (machinery used and delivery temperature) have a significant impact on the production of airborne particulates and explain up to 44% of variability. This confirms the outcomes described by previous studies. The influence of the production factors is limited though, and should be complemented by studying factors involving the worker such as work style and the mix of tasks. The residual volatile compounds, being part of the bituminous binder and released during paving operations, control the volatile emissions; 73% of the encountered field variability is explained by the composition of the bitumen batch. © The Author 2014. Published by Oxford University Press on behalf of the British Occupational Hygiene Society.
Climate controls on fire pattern in African and Australian continents

NASA Astrophysics Data System (ADS)

Zubkova, M.; Boschetti, L.; Abatzoglou, J. T.

2017-12-01

Studies have primarily attributed the recent decrease in global fire activity in many savanna and grassland regions as detected by the Global Fire Emission Database (GFEDv4s) to anthropogenic changes such as deforestation and cropland expansion (Andela et al. 2017, van der Werf et al. 2008). These changes have occurred despite increases in fire weather season length (Jolly et al. 2015). Efforts to better resolve retrospective and future changes in fire activity require refining the host of influences on societal and environmental factors on fire activity. In this study, we analyzed how climate variability influences interannual fire activity in Africa and Australia, the two continents most affected by fire and responsible for over half of the global pyrogenic emissions. We expand on the analysis presented in Andela et al. (2017) by using the most recent Collection 6 MODIS MCD64 Burned Area Product and exploring the explanatory power of a broader suite of climate variables that have been previously shown to explain fire variability (Bowman et al. 2017). We examined which climate metrics show a strong interannual relationship with the amount of burned area and fire size accounting for antecedent and in-season atmospheric conditions. Fire characteristics were calculated using the 500m resolution MCD64A1 product (2002-2016); the analysis was conducted at the ecoregion scale, and further stratified by landcover using a broad aggregation (forest, shrublands and grasslands) of the Landcover CCI maps (CCI-LC, 2014); all agricultural areas fires were excluded from the analysis. The results of the analysis improve our knowledge of climate controls on fire dynamics in the most fire-prone places in the world which is critical for statistical fire and vegetation models. Being able to predict the impact of climate on fire activity has a strategic importance in designing future fire management scenarios, help to avoid degradation of biodiversity and ecosystem services and improve our understanding of future ecological problems that we can face due to climate change. Andela et al. 2017. doi: 10.1126/science.aal4108 Bowman et al. 2017. doi:10.1038/s41559-016-0058 CCI-LC. 2014. CCI-LC Product User Guide. UCL-Geomatics, Belgium Lolly et al. 2015. doi:10.1038/ncomms8537 van der Werf et al. 2008. doi:10.1029/2007GB003122
Pathophysiology, Evaluation, and Management of Edema in Childhood Nephrotic Syndrome

PubMed Central

Ellis, Demetrius

2016-01-01

Generalized edema is a major presenting clinical feature of children with nephrotic syndrome (NS) exemplified by such primary conditions as minimal change disease (MCD). In these children with classical NS and marked proteinuria and hypoalbuminemia, the ensuing tendency to hypovolemia triggers compensatory physiological mechanisms, which enhance renal sodium (Na+) and water retention; this is known as the “underfill hypothesis.” Edema can also occur in secondary forms of NS and several other glomerulonephritides, in which the degree of proteinuria and hypoalbuminemia, are variable. In contrast to MCD, in these latter conditions, the predominant mechanism of edema formation is “primary” or “pathophysiological,” Na+ and water retention; this is known as the “overfill hypothesis.” A major clinical challenge in children with these disorders is to distinguish the predominant mechanism of edema formation, identify other potential contributing factors, and prevent the deleterious effects of diuretic regimens in those with unsuspected reduced effective circulatory volume (i.e., underfill). This article reviews the Starling forces that become altered in NS so as to tip the balance of fluid movement in favor of edema formation. An understanding of these pathomechanisms then serves to formulate a more rational approach to prevention, evaluation, and management of such edema. PMID:26793696
Prevalence and clinical findings of biopsy-proven glomerulonephritidis in Iran.

PubMed

Naini, Afsoon Emami; Harandi, Ali Amini; Ossareh, Shahrzad; Ghods, Ahad; Bastani, Bahar

2007-11-01

Epidemiological data of renal diseases is population-based and have great geographic variability. Due to the lack of a national renal data registry system, there is no information on the prevalence rate, and clinical and laboratory features of various glomerulo-nephritidis (GNs) in Iran. In a retrospective cross sectional study, we analyzed 462 adult renal biopsies in Tehran, Iran. We determined the prevalence rate and the frequency of different clinical and laboratory findings in patients with different GNs. We also compared our results with the reports from other countries. There were 267 (57.8%) males and 195 (42.2%) females. The mean (+/- SD) age was 33.6 +/- 15.7 (range, 13-75) years. A total of 55 biopsies, which had revealed pathologies other than GNs, were excluded. Among the remaining 407 biopsies, membranous glomerulopathy (MGN) was the most common GN (23.6%), followed by IgAN (13.5%), membranoproliferative GN (MPGN) (11.5%), systemic lupus nephritis (SLE-GN) (10.6%), focal and segmental glomerulosclerosis (FSGS) (10.3%), and minimal change disease (MCD) (9.8%). Our study shows that MGN is the most common form of GN, followed by IgAN, MPGN, SLE-GN, FSGS and MCD in adult patients in Iran. A multi-center study with a larger sample size is needed for more comprehensive data in Iranian population.
Observed variability in the upper layers at the Equator, 90°E in the Indian Ocean during 2001-2008, 1: zonal currents

NASA Astrophysics Data System (ADS)

Rao, R. R.; Horii, T.; Masumoto, Y.; Mizuno, K.

2017-08-01

The observed variability of zonal currents (ZC) at the Equator, 90°E shows a strong seasonal cycle in the near-surface 40-350 m water column with periodic east-west reversals most pronounced at semiannual frequency. Superposed on this, a strong intraseasonal variability of 30-90 day periodicity is also prominently seen in the near-surface layer (40-80 m) almost throughout the year with the only exception of February-March. An eastward flowing equatorial undercurrent (EUC) is present in the depth range of 80-160 m during March-April and October-November. The observed intraseasonal variability in the near-surface layer is primarily determined by the equatorial zonal westerly wind bursts (WWBs) through local frictional coupling between the zonal flow in the surface layer and surface zonal winds and shows large interannual variability. The eastward flowing EUC maintained by the ZPG set up by the east-west slope of the thermocline remotely controlled by the zonal wind (ZW) and zonally propagating wave fields also shows significant interannual variability. This observed variability on interannual time scales appears to be controlled by the corresponding variability in the alongshore winds off the Somalia coast during the preceding boreal winter, the ZW field along the equator, and the associated zonally propagating Kelvin and Rossby waves. The salinity induced vertical stratification observed in the near-surface layer through barrier layer thickness (BLT) effects also shows a significant influence on the ZC field on intraseasonal time scale. Interestingly, among all the 8 years (2001-2008), relatively weaker annual cycle is seen in both ZC in the 40-350 m water column and boreal spring sea surface temperature (SST) only during 2001 and 2008 along the equator caused through propagating wave dynamics.
Spectroscopic and Quantum Chemical Studies on low-spin FeIV=O complexes: Fe-O bonding and its contributions to reactivity

PubMed Central

Decker, Andrea; Rohde, Jan-Uwe; Klinker, Eric J.; Wong, Shaun D.; Que, Lawrence; Solomon, Edward I.

2008-01-01

High valent FeIV=O species are key intermediates in the catalytic cycles of many mononuclear non-heme iron enzymes and have been structurally defined in model systems. Variable temperature magnetic circular dichroism (VT-MCD) spectroscopy has been used to evaluate the electronic structures and in particular the Fe-O bonds of three FeIV=O (S=1) model complexes, [FeIV(O)(TMC)(NCMe)]2+, [FeIV(O)(TMC)(OC(O)CF3)]+, and [FeIV(O)(N4Py)]2+. These complexes are characterized by their strong and covalent Fe-O π-bonds. The MCD spectra show a vibronic progression in the non-bonding → π* excited state, providing the Fe-O stretching frequency and the Fe-O bond length in this excited state and quantifying the π-contribution to the total Fe-O bond. Correlation of these experimental data to reactivity shows that the [FeIV(O)(N4Py)]2+ complex, with the highest reactivity towards hydrogen-atom abstraction among the three, has the strongest Fe-O π-bond. Density Functional calculations were correlated to the data and support the experimental analysis. The strength and covalency of the Fe-O π-bond result in high oxygen character in the important frontier molecular orbitals (FMOs) for this reaction, the unoccupied β-spin d(xz/yz) orbitals, and activates these for electrophilic attack. An extension to biologically relevant FeIV=O (S=2) enzyme intermediates shows that these can perform electrophilic attack reactions along the same mechanistic pathway (π-FMO pathway) with similar reactivity, but also have an additional reaction channel involving the unoccupied α-spin d(z2) orbital (σ-FMO pathway). These studies experimentally probe the FMOs involved in the reactivity of FeIV=O (S=1) model complexes resulting in a detailed understanding of the Fe-O bond and its contributions to reactivity. PMID:18052249

Dietary sucrose is essential to the development of liver injury in the methionine-choline-deficient model of steatohepatitis.

PubMed

Pickens, Michael K; Yan, Jim S; Ng, Raymond K; Ogata, Hisanobu; Grenert, James P; Beysen, Carine; Turner, Scott M; Maher, Jacquelyn J

2009-10-01

Methionine-choline-deficient (MCD) diets cause steatohepatitis in rodents and are used to study the pathophysiology of fatty liver disease in human beings. The most widely used commercial MCD formulas not only lack methionine and choline but also contain excess sucrose and fat. The objective of this study was to determine whether dietary sucrose in the MCD formula plays a role in the pathogenesis of MCD-related liver disease. We prepared two custom MCD formulas, one containing sucrose as the principal carbohydrate and the other substituting sucrose with starch. Mice fed the sucrose-enriched formula developed typical features of MCD-related liver disease, including hepatic steatosis, hepatocellular apoptosis, alanine aminotransferase elevation, lipid peroxidation, and hepatic inflammation. In contrast, mice fed MCD-starch were significantly protected against liver injury. MCD-sucrose and MCD-starch mice displayed identical diet-related abnormalities in hepatic fatty acid uptake and triglyceride secretion. Hepatic de novo lipogenesis and triglyceride synthesis, however, were 2 times higher in MCD-sucrose mice than MCD-starch mice (P < 0.01). Hepatic lipid analysis revealed accumulation of excess saturated fatty acids in MCD-sucrose mice that correlated with hepatocellular injury. Overall, the results indicate that dietary sucrose is critical to the pathogenesis of MCD-mediated steatohepatitis. They suggest that saturated fatty acids, which are products of de novo lipogenesis, are mediators of hepatic toxicity in this model of liver disease.
High-field magnets using high-critical-temperature superconducting thin films

DOEpatents

Mitlitsky, F.; Hoard, R.W.

1994-05-10

High-field magnets fabricated from high-critical-temperature superconducting ceramic (HTSC) thin films which can generate fields greater than 4 Tesla are disclosed. The high-field magnets are made of stackable disk-shaped substrates coated with HTSC thin films, and involves maximizing the critical current density, superconducting film thickness, number of superconducting layers per substrate, substrate diameter, and number of substrates while minimizing substrate thickness. The HTSC thin films are deposited on one or both sides of the substrates in a spiral configuration with variable line widths to increase the field. 4 figures.
High-field magnets using high-critical-temperature superconducting thin films

DOEpatents

Mitlitsky, Fred; Hoard, Ronald W.

1994-01-01

High-field magnets fabricated from high-critical-temperature superconducting ceramic (HTSC) thin films which can generate fields greater than 4 Tesla. The high-field magnets are made of stackable disk-shaped substrates coated with HTSC thin films, and involves maximizing the critical current density, superconducting film thickness, number of superconducting layers per substrate, substrate diameter, and number of substrates while minimizing substrate thickness. The HTSC thin films are deposited on one or both sides of the substrates in a spiral configuration with variable line widths to increase the field.
Mathematical Model of Solidification During Electroslag Casting of Pilger Roll

NASA Astrophysics Data System (ADS)

Liu, Fubin; Li, Huabing; Jiang, Zhouhua; Dong, Yanwu; Chen, Xu; Geng, Xin; Zang, Ximin

A mathematical model for describing the interaction of multiple physical fields in slag bath and solidification process in ingot during pilger roll casting with variable cross-section which is produced by the electroslag casting (ESC) process was developed. The commercial software ANSYS was applied to calculate the electromagnetic field, magnetic driven fluid flow, buoyancy-driven flow and heat transfer. The transportation phenomenon in slag bath and solidification characteristic of ingots are analyzed for variable cross-section with variable input power under the conditions of 9Cr3NiMo steel and 70%CaF2 - 30%Al2O3 slag system. The calculated results show that characteristic of current density distribution, velocity patterns and temperature profiles in the slag bath and metal pool profiles in ingot have distinct difference at variable cross-sections due to difference of input power and cooling condition. The pool shape and the local solidification time (LST) during Pilger roll ESC process are analyzed.
Statistical methods and regression analysis of stratospheric ozone and meteorological variables in Isfahan

NASA Astrophysics Data System (ADS)

Hassanzadeh, S.; Hosseinibalam, F.; Omidvari, M.

2008-04-01

Data of seven meteorological variables (relative humidity, wet temperature, dry temperature, maximum temperature, minimum temperature, ground temperature and sun radiation time) and ozone values have been used for statistical analysis. Meteorological variables and ozone values were analyzed using both multiple linear regression and principal component methods. Data for the period 1999-2004 are analyzed jointly using both methods. For all periods, temperature dependent variables were highly correlated, but were all negatively correlated with relative humidity. Multiple regression analysis was used to fit the meteorological variables using the meteorological variables as predictors. A variable selection method based on high loading of varimax rotated principal components was used to obtain subsets of the predictor variables to be included in the linear regression model of the meteorological variables. In 1999, 2001 and 2002 one of the meteorological variables was weakly influenced predominantly by the ozone concentrations. However, the model did not predict that the meteorological variables for the year 2000 were not influenced predominantly by the ozone concentrations that point to variation in sun radiation. This could be due to other factors that were not explicitly considered in this study.
Variability and periodicity of field M dwarfs revealed by multichannel monitoring

NASA Astrophysics Data System (ADS)

Rockenfeller, B.; Bailer-Jones, C. A. L.; Mundt, R.

2006-03-01

We present simultaneous, multiband photometric monitoring of 19 field dwarfs covering most of the M spectral sequence (M2-M9). Significant variability was found in seven objects in at least one out of the three channels I, R and G. Periodic variability was tested with a CLEAN power spectral analysis. Two objects, LHS370 (M5V) and 2M1707+64 (M9V), show periods of 5.9± 2.0 and 3.65± 0.1 h respectively. On account of the agreement with the typical values of v sin i published for M dwarfs (Mohanty & Basri 2003, ApJ, 583, 451), we claim these to be the objects' rotation periods. Three further objects show possible periods of a few hours. Comparing the variability amplitude in each channel with predictions based on the synthetic spectra of Allard et al. (2001, ApJ, 556, 357), we investigated the source of variability in LHS370 and 2M1707+64. For the latter, we find evidence for the presence of magnetically-induced cool spots at a temperature contrast of 4-8%, with a projected surface coverage factor of less than 0.075. Moreover, we can rule out dust clouds (as represented by the COND or DUSTY models) as the cause of the variability. No conclusion can be drawn in the case of LHS370. Comparing the frequency of occurrence of variability in this and various L dwarf samples published over the past few years, we find that variability is more common in field L dwarfs than in field M dwarfs (for amplitudes larger than 0.005 mag on timescales of 0.5 to 20 h). Using the homogeneous data sets of this work and Bailer-Jones & Mundt (2001, A&A, 367, 218), we find fractions of variable objects of 0.21± 0.11 among field M dwarfs and 0.70± 0.26 among field L dwarfs (and 0.29± 0.13, 0.48± 0.12 respectively if we take into account a larger yet more inhomogeneous sample). This is marginally significant (2σ deviation) and implies a change in the physical nature and/or extent of surface features when moving from M to L dwarfs.
Investigation of second grade fluid through temperature dependent thermal conductivity and non-Fourier heat flux

NASA Astrophysics Data System (ADS)

Hayat, T.; Ahmad, Salman; Khan, M. Ijaz; Alsaedi, A.; Waqas, M.

2018-06-01

Here we investigated stagnation point flow of second grade fluid over a stretchable cylinder. Heat transfer is characterized by non-Fourier law of heat flux and thermal stratification. Temperature dependent thermal conductivity and activation energy are also accounted. Transformations procedure is applying to transform the governing PDE's into ODE's. Obtained system of ODE's are solved analytically by HAM. Influence of flow variables on velocity, temperature, concentration, skin friction and Sherwood number are analyzed. Obtained outcome shows that velocity enhanced through curvature parameter, viscoelastic parameter and velocities ratio variable. Temperature decays for larger Prandtl number, thermal stratification, thermal relaxation and curvature parameter. Sherwood number and concentration field show opposite behavior for higher estimation of activation energy, reaction rate, curvature parameter and Schmidt number.
Analysis and interpretation of variabilities in ozone and temperature fields

NASA Technical Reports Server (NTRS)

Chandra, S.

1990-01-01

The temporal and spatial variabilities were studied of short and long term fluctuations in stratospheric ozone and temperature at various pressure levels using several years of ozone, temperature, and solar flux data from Nimbus 4, Nimbus 7, and SME satellites. Some results are as follows: (1) the solar UV flux and various indices of solar activity indicate a strong period at about 5 months; (2) satellite total ozone observations were analyzed using 17 years of data from the Nimbus 4 BUV and the Nimbus 7 SBUV experiments, which show very similar seasonal variations and quasibiennial oscillation (QBO) with some indication of a 4 year component; and (3) the zonal characteristics of both the ozone and temperature trends were derived from ten years of total ozone and 50 mb temperature based on the Nimbus 7 TOMS measurements and the NMC analyses respectively.
Variation in soil carbon dioxide efflux at two spatial scales in a topographically complex boreal forest

USGS Publications Warehouse

Kelsey, Katharine C.; Wickland, Kimberly P.; Striegl, Robert G.; Neff, Jason C.

2012-01-01

Carbon dynamics of high-latitude regions are an important and highly uncertain component of global carbon budgets, and efforts to constrain estimates of soil-atmosphere carbon exchange in these regions are contingent on accurate representations of spatial and temporal variability in carbon fluxes. This study explores spatial and temporal variability in soilatmosphere carbon dynamics at both fine and coarse spatial scales in a high-elevation, permafrost-dominated boreal black spruce forest. We evaluate the importance of landscape-level investigations of soil-atmosphere carbon dynamics by characterizing seasonal trends in soil-atmosphere carbon exchange, describing soil temperature-moisture-respiration relations, and quantifying temporal and spatial variability at two spatial scales: the plot scale (0–5 m) and the landscape scale (500–1000 m). Plot-scale spatial variability (average variation on a given measurement day) in soil CO2 efflux ranged from a coefficient of variation (CV) of 0.25 to 0.69, and plot-scale temporal variability (average variation of plots across measurement days) in efflux ranged from a CV of 0.19 to 0.36. Landscape-scale spatial and temporal variability in efflux was represented by a CV of 0.40 and 0.31, respectively, indicating that plot-scale spatial variability in soil respiration is as great as landscape-scale spatial variability at this site. While soil respiration was related to soil temperature at both the plot- and landscape scale, landscape-level descriptions of soil moisture were necessary to define soil respiration-moisture relations. Soil moisture variability was also integral to explaining temporal variability in soil respiration. Our results have important implications for research efforts in high-latitude regions where remote study sites make landscape-scale field campaigns challenging.
Spatial Variability of Snowpack Properties On Small Slopes

NASA Astrophysics Data System (ADS)

Pielmeier, C.; Kronholm, K.; Schneebeli, M.; Schweizer, J.

The spatial variability of alpine snowpacks is created by a variety of parameters like deposition, wind erosion, sublimation, melting, temperature, radiation and metamor- phism of the snow. Spatial variability is thought to strongly control the avalanche initi- ation and failure propagation processes. Local snowpack measurements are currently the basis for avalanche warning services and there exist contradicting hypotheses about the spatial continuity of avalanche active snow layers and interfaces. Very little about the spatial variability of the snowpack is known so far, therefore we have devel- oped a systematic and objective method to measure the spatial variability of snowpack properties, layering and its relation to stability. For a complete coverage, the analysis of the spatial variability has to entail all scales from mm to km. In this study the small to medium scale spatial variability is investigated, i.e. the range from centimeters to tenths of meters. During the winter 2000/2001 we took systematic measurements in lines and grids on a flat snow test field with grid distances from 5 cm to 0.5 m. Fur- thermore, we measured systematic grids with grid distances between 0.5 m and 2 m in undisturbed flat fields and on small slopes above the tree line at the Choerbschhorn, in the region of Davos, Switzerland. On 13 days we measured the spatial pattern of the snowpack stratigraphy with more than 110 snow micro penetrometer measure- ments at slopes and flat fields. Within this measuring grid we placed 1 rutschblock and 12 stuffblock tests to measure the stability of the snowpack. With the large num- ber of measurements we are able to use geostatistical methods to analyse the spatial variability of the snowpack. Typical correlation lengths are calculated from semivari- ograms. Discerning the systematic trends from random spatial variability is analysed using statistical models. Scale dependencies are shown and recurring scaling patterns are outlined. The importance of the small and medium scale spatial variability for the larger (kilometer) scale spatial variability as well as for the avalanche formation are discussed. Finally, an outlook on spatial models for the snowpack variability is given.
A similarity solution of time dependent MHD liquid film flow over stretching sheet with variable physical properties

NASA Astrophysics Data System (ADS)

Idrees, M.; Rehman, Sajid; Shah, Rehan Ali; Ullah, M.; Abbas, Tariq

2018-03-01

An analysis is performed for the fluid dynamics incorporating the variation of viscosity and thermal conductivity on an unsteady two-dimensional free surface flow of a viscous incompressible conducting fluid taking into account the effect of a magnetic field. Surface tension quadratically vary with temperature while fluid viscosity and thermal conductivity are assumed to vary as a linear function of temperature. The boundary layer partial differential equations in cartesian coordinates are transformed into a system of nonlinear ordinary differential equations (ODEs) by similarity transformation. The developed nonlinear equations are solved analytically by Homotopy Analysis Method (HAM) while numerically by using the shooting method. The Effects of natural parameters such as the variable viscosity parameter A, variable thermal conductivity parameter N, Hartmann number Ma, film Thickness, unsteadiness parameter S, Thermocapillary number M and Prandtl number Pr on the velocity and temperature profiles are investigated. The results for the surface skin friction coefficient f″ (0) , Nusselt number (heat flux) -θ‧ (0) and free surface temperature θ (1) are presented graphically and in tabular form.
Literature Review of Low Impact Development for Stormwater Control

DTIC Science & Technology

2015-05-30

appropriate LID technology can be selected to capture the targeted vi metal pollutant. Little information exists on the effects of field variables such as...loading rates and volume, temperature , climate, pH, sediments, organics, and maintenance cycles on systems in the field. 4. The amount of research...maximum extent technically feasible, the pre-development hydrology of the property with regard to the temperature , rate, volume, and duration of flow
Drivers of River Water Temperature Space-time Variability in Northeast Greenland

NASA Astrophysics Data System (ADS)

Hannah, D. M.; Docherty, C.; Milner, A.

2015-12-01

Water temperature plays an important role in stream ecosystem functioning; however, water temperature dynamics in high Arctic environments have received relatively little attention. Given that global climate is predicted to change most at high latitudes, it is vital we broaden our knowledge of space-time variability in Arctic river temperature to understand controlling processes and potential consequences of climate change. To address this gap, our research aims: (1) to characterise seasonal and diel patterns of variability over three summer and two winter seasons with contrasting hydrometeorological conditions, (2) to unravel the key drivers influencing thermal regimes and (3) to place these results in the context of other snow/ glacier-melt dominated environments. Fieldwork was undertaken in July-September 2013, 2014 and 2015 close to the Zackenberg Research Station in Northeast Greenland - an area of continuous permafrost with a mean July air temperature of 6 °C. Five streams were chosen that drain different water source contributions (glacier melt, snow melt, groundwater). Data were collected at 30 minute intervals using micro-dataloggers. Air temperature data were collected within 7km by the Greenland Survey. Weather conditions were highly variable between field campaigns, with 2013 experiencing below average, and 2014 and 2015 above average, snowfall. Summer water temperatures appear to be high in comparison to some Arctic streams in Alaska and in Svalbard. Winter snowfall extent decreases stream water temperature; and water temperature increases with atmospheric exposure time (distance from source) - illustrating the intertwined controls of water and heat fluxes. These Greenland streams are most strongly influenced by snowmelt, but groundwater contributions could increase with a changing climate due to increased active layer thickness, which may result in increased river temperature with implications for aquatic biodiversity and ecosystem functioning.
Seasonal temperature variability and emergency hospital admissions for respiratory diseases: a population-based cohort study.

PubMed

Sun, Shengzhi; Laden, Francine; Hart, Jaime E; Qiu, Hong; Wang, Yan; Wong, Chit Ming; Lee, Ruby Siu-Yin; Tian, Linwei

2018-04-05

Climate change increases global mean temperature and changes short-term (eg, diurnal) and long-term (eg, intraseasonal) temperature variability. Numerous studies have shown that mean temperature and short-term temperature variability are both associated with increased respiratory morbidity or mortality. However, data on the impact of long-term temperature variability are sparse. We aimed to assess the association of intraseasonal temperature variability with respiratory disease hospitalisations among elders. We ascertained the first occurrence of emergency hospital admissions for respiratory diseases in a prospective Chinese elderly cohort of 66 820 older people (≥65 years) with 10-13 years of follow-up. We used an ordinary kriging method based on 22 weather monitoring stations in Hong Kong to spatially interpolate daily ambient temperature for each participant's residential address. Seasonal temperature variability was defined as the SD of daily mean summer (June-August) or winter (December-February) temperatures. We applied Cox proportional hazards regression with time-varying exposure of seasonal temperature variability to respiratory admissions. During the follow-up time, we ascertained 12 689 cases of incident respiratory diseases, of which 6672 were pneumonia and 3075 were COPD. The HRs per 1°C increase in wintertime temperature variability were 1.20 (95% CI 1.08 to 1.32), 1.15 (1.01 to 1.31) and 1.41 (1.15 to 1.71) for total respiratory diseases, pneumonia and COPD, respectively. The associations were not statistically significant for summertime temperature variability. Wintertime temperature variability was associated with higher risk of incident respiratory diseases. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2018. All rights reserved. No commercial use is permitted unless otherwise expressly granted.
Geometrical protection of topological magnetic solitons in microprocessed chiral magnets

NASA Astrophysics Data System (ADS)

Mito, Masaki; Ohsumi, Hiroyuki; Tsuruta, Kazuki; Kotani, Yoshinori; Nakamura, Tetsuya; Togawa, Yoshihiko; Shinozaki, Misako; Kato, Yusuke; Kishine, Jun-ichiro; Ohe, Jun-ichiro; Kousaka, Yusuke; Akimitsu, Jun; Inoue, Katsuya

2018-01-01

A chiral soliton lattice stabilized in a monoaxial chiral magnet CrNb3S6 is a magnetic superlattice consisting of magnetic kinks with a ferromagnetic background. The magnetic kinks are considered to be topological magnetic solitons (TMSs). Changes in the TMS number yield discretized responses in magnetization and electrical conductivity, and this effect is more prominent in smaller crystals. We demonstrate that, in microprocessed CrNb3S6 crystals, TMSs are geometrically protected through element-selected micromagnetometry using soft x-ray magnetic circular dichroism (MCD). A series of x-ray MCD data is supported by mean-field and micromagnetic analyses. By designing the microcrystal geometry, TMS numbers can be successfully changed and fixed over a wide range of magnetic fields.
Cardiac dysfunction and peri-weaning mortality in malonyl-coenzyme A decarboxylase (MCD) knockout mice as a consequence of restricting substrate plasticity.

PubMed

Aksentijević, Dunja; McAndrew, Debra J; Karlstädt, Anja; Zervou, Sevasti; Sebag-Montefiore, Liam; Cross, Rebecca; Douglas, Gillian; Regitz-Zagrosek, Vera; Lopaschuk, Gary D; Neubauer, Stefan; Lygate, Craig A

2014-10-01

Inhibition of malonyl-coenzyme A decarboxylase (MCD) shifts metabolism from fatty acid towards glucose oxidation, which has therapeutic potential for obesity and myocardial ischemic injury. However, ~40% of patients with MCD deficiency are diagnosed with cardiomyopathy during infancy. To clarify the link between MCD deficiency and cardiac dysfunction in early life and to determine the contributing systemic and cardiac metabolic perturbations. MCD knockout mice ((-/-)) exhibited non-Mendelian genotype ratios (31% fewer MCD(-/-)) with deaths clustered around weaning. Immediately prior to weaning (18days) MCD(-/-) mice had lower body weights, elevated body fat, hepatic steatosis and glycogen depletion compared to wild-type littermates. MCD(-/-) plasma was hyperketonemic, hyperlipidemic, had 60% lower lactate levels and markers of cellular damage were elevated. MCD(-/-) hearts exhibited hypertrophy, impaired ejection fraction and were energetically compromised (32% lower total adenine nucleotide pool). However differences between WT and MCD(-/-) converged with age, suggesting that, in surviving MCD(-/-) mice, early cardiac dysfunction resolves over time. These observations were corroborated by in silico modelling of cardiomyocyte metabolism, which indicated improvement of the MCD(-/-) metabolic phenotype and improved cardiac efficiency when switched from a high-fat diet (representative of suckling) to a standard post-weaning diet, independent of any developmental changes. MCD(-/-) mice consistently exhibited cardiac dysfunction and severe metabolic perturbations while on a high-fat, low carbohydrate diet of maternal milk and these gradually resolved post-weaning. This suggests that dysfunction is a common feature of MCD deficiency during early development, but that severity is dependent on composition of dietary substrates. Copyright © 2014. Published by Elsevier Ltd.
Immunophenotypes of macular corneal dystrophy in India and correlation with mutations in CHST6.

PubMed

Sultana, Afia; Klintworth, Gordon K; Thonar, Eugene J-M A; Vemuganti, Geeta K; Kannabiran, Chitra

2009-01-01

To determine the immunophenotypes of macular corneal dystrophy (MCD) in Indian patients and to correlate them with mutations in the carbohydrate 6-sulfotransferase (CHST6) gene. Sixty-four patients from 53 families with MCD that were previously screened for mutations in CHST6 were included in an immunophenotype analysis. Antigenic keratan sulfate (AgKS) in serum as well as corneal tissue was evaluated in 31 families. Only cornea was evaluated in 11 families, and only serum was evaluated in 11 families. AgKS was detected in formalin-fixed, paraffin-embedded corneal sections by immunohistochemistry and in serum by ELISA using a monoclonal antibody against sulfated forms of KS in patients with MCD as well as normal controls. Analysis of corneal and/or serum AgKS disclosed MCD type I (27 families), MCD type IA (5 families), and MCD type II (3 families) in the cases studied. An additional 10 families were either MCD type I or MCD type IA since only serum AgKS data were available. Seven families manifested atypical immunophenotypes since the corneal AgKS expression was either of MCD type I or MCD type IA, but serum AgKS levels ranged from 19 ng/ml to 388 ng/ml. More than one immunophenotype was detected amongst siblings in two families. Each immunophenotype was associated with mutational heterogeneity in CHST6. MCD type I was the predominant immunophenotype in the Indian population studied followed by MCD type IA and then MCD type II. We detected further immunophenotypic heterogeneity by finding atypical patterns of AgKS reactivity in a subset of families. There were no simple correlations between immunophenotypes and specific mutations in CHST6, suggesting that factors other than CHST6 mutations may be contributing to the immunophenotypes in MCD.
A fast field-cycling device for high-resolution NMR: Design and application to spin relaxation and hyperpolarization experiments

NASA Astrophysics Data System (ADS)

Kiryutin, Alexey S.; Pravdivtsev, Andrey N.; Ivanov, Konstantin L.; Grishin, Yuri A.; Vieth, Hans-Martin; Yurkovskaya, Alexandra V.

2016-02-01

A device for performing fast magnetic field-cycling NMR experiments is described. A key feature of this setup is that it combines fast switching of the external magnetic field and high-resolution NMR detection. The field-cycling method is based on precise mechanical positioning of the NMR probe with the mounted sample in the inhomogeneous fringe field of the spectrometer magnet. The device enables field variation over several decades (from 100 μT up to 7 T) within less than 0.3 s; progress in NMR probe design provides NMR linewidths of about 10-3 ppm. The experimental method is very versatile and enables site-specific studies of spin relaxation (NMRD, LLSs) and spin hyperpolarization (DNP, CIDNP, and SABRE) at variable magnetic field and at variable temperature. Experimental examples of such studies are demonstrated; advantages of the experimental method are described and existing challenges in the field are outlined.
Effects of short-term variability of meteorological variables on soil temperature in permafrost regions

NASA Astrophysics Data System (ADS)

Beer, Christian; Porada, Philipp; Ekici, Altug; Brakebusch, Matthias

2018-03-01

Effects of the short-term temporal variability of meteorological variables on soil temperature in northern high-latitude regions have been investigated. For this, a process-oriented land surface model has been driven using an artificially manipulated climate dataset. Short-term climate variability mainly impacts snow depth, and the thermal diffusivity of lichens and bryophytes. These impacts of climate variability on insulating surface layers together substantially alter the heat exchange between atmosphere and soil. As a result, soil temperature is 0.1 to 0.8 °C higher when climate variability is reduced. Earth system models project warming of the Arctic region but also increasing variability of meteorological variables and more often extreme meteorological events. Therefore, our results show that projected future increases in permafrost temperature and active-layer thickness in response to climate change will be lower (i) when taking into account future changes in short-term variability of meteorological variables and (ii) when representing dynamic snow and lichen and bryophyte functions in land surface models.
Modeling studies on the formation of Hurricane Helene: the impact of GPS dropwindsondes from the NAMMA 2006 field campaign

NASA Astrophysics Data System (ADS)

Folmer, Michael J.; Pasken, Robert W.; Chiao, Sen; Dunion, Jason; Halverson, Jeffrey

2016-12-01

Numerical simulations, using the weather research and forecasting (WRF) model in concert with GPS dropwindsondes released during the NASA African Monsoon Multidisciplinary Analyses 2006 Field Campaign, were conducted to provide additional insight on SAL-TC interaction. Using NCEP Final analysis datasets to initialize the WRF, a sensitivity test was performed on the assimilated (i.e., observation nudging) GPS dropwindsondes to understand the effects of individual variables (i.e., moisture, temperature, and winds) on the simulation and determine the extent of improvement when compared to available observations. The results suggested that GPS dropwindsonde temperature data provided the most significant difference in the simulated storm organization, storm strength, and synoptic environment, but all of the variables assimilated at the same time give a more representative mesoscale and synoptic picture.

Probing the Martian Atmosphere with MAVEN/IUVS Stellar Occultations

NASA Astrophysics Data System (ADS)

Gröller, H.; Yelle, R. V.; Koskinen, T.; Montmessin, F.; Lacombe, G.; Schneider, N. M.; Deighan, J.; Stewart, I. F.; Jain, S.; Chaffin, M.; Crismani, M. M. J.; Stiepen, A.; Lefèvre, F.; McClintock, B.; Clarke, J. T.; Holsclaw, G.; Mahaffy, P. R.; Bougher, S. W.; Jakosky, B. M.

2015-12-01

We present the first results of FUV and MUV stellar occultations taken with the Imaging UltraViolet Spectrometer (IUVS) onboard MAVEN. The FUV and MUV channels of the IUVS together cover the spectral range from 115 to 330 nm. The first two campaigns were executed during March 24 and March 26, 2015, and during May 17 and May 18, 2015, respectively. So far 13 occultations could be used to retrieve CO2 and O2 number densities in the altitude range between 100 and 150 km from the first occultation campaign. From the second occultation campaign number densities for CO2, O3, and aerosols were obtained between 20 and 100 km altitude. Temperature profiles for the same altitude ranges were calculated by applying the constraint of hydrostatic equilibrium to the CO2 densities. With a cadence of 2.6 s, including a 2.0 s integration time, the altitude resolution of the density and temperature profiles is between 1.5 and 4.5 km, depending on the geometry of the particular occultation. The retrieved density profiles of CO2 and O2 agree with previous measurements obtained by the Mars Express SPICAM instrument and by Viking 1 and 2. The corresponding O2 mixing ratios range from 1 to 5 x 10-3, also in agreement with previous observations. The temperatures that we retrieved agree with the models in the Mars Climate Database (MCD) between 10-2 and 10-4 Pa. At lower pressures, however, the measured temperatures are on average 70 K to 100 K cooler than the temperatures predicted by the MCD. This is because the model temperatures increase steadily with altitude above the mesopause whereas the observed temperatures decrease at pressures less than 3.5 x 10-5 Pa, reaching a minimum near 7 x 10-6 Pa. The large differences between the MCD and our results indicate that global models of thermal structure around the mesopause need to be revised.
Meta-Analysis of the Effect of Overexpression of Dehydration-Responsive Element Binding Family Genes on Temperature Stress Tolerance and Related Responses

PubMed Central

Dong, Chao; Ma, Yuanchun; Zheng, Dan; Wisniewski, Michael; Cheng, Zong-Ming

2018-01-01

Dehydration-responsive element binding proteins are transcription factors that play a critical role in plant response to temperature stress. Over-expression of DREB genes has been demonstrated to enhance temperature stress tolerance. A series of physiological and biochemical modifications occur in a complex and integrated way when plants respond to temperature stress, which makes it difficult to assess the mechanism underlying the DREB enhancement of stress tolerance. A meta-analysis was conducted of the effect of DREB overexpression on temperature stress tolerance and the various parameters modulated by overexpression that were statistically quantified in 75 published articles. The meta-analysis was conducted to identify the overall influence of DREB on stress-related parameters in transgenic plants, and to determine how different experimental variables affect the impact of DREB overexpression. Viewed across all the examined studies, 7 of the 8 measured plant parameters were significantly (p ≤ 0.05) modulated in DREB-transgenic plants when they were subjected to temperature stress, while 2 of the 8 parameters were significantly affected in non-stressed control plants. The measured parameters were modulated by 32% or more by various experimental variables. The modulating variables included, acclimated or non-acclimated, type of promoter, stress time and severity, source of the donor gene, and whether the donor and recipient were the same genus. These variables all had a significant effect on the observed impact of DREB overexpression. Further studies should be conducted under field conditions to better understand the role of DREB transcription factors in enhancing plant tolerance to temperature stress. PMID:29896212
Bacterial influence on alkenones in live microalgae.

PubMed

Segev, Einat; Castañeda, Isla S; Sikes, Elisabeth L; Vlamakis, Hera; Kolter, Roberto

2016-02-01

The microalga Emiliania huxleyi produces alkenone lipids that are important proxies for estimating past sea surface temperatures. Field calibrations of this proxy are robust but highly variable results are obtained in culture. Here, we present results suggesting that algal-bacterial interactions may be responsible for some of this variability. Co-cultures of E. huxleyi and the bacterium Phaeobacter inhibens resulted in a 2.5-fold decrease in algal alkenone-containing lipid bodies. In addition levels of unsaturated alkenones increase in co-cultures. These changes result in an increase in the reconstructed growth temperature of up to 2°C relative to axenic algal cultures. © 2015 Phycological Society of America.
Bacterial Influence on Alkenones in Live Microalgae1

PubMed Central

Segev, Einat; Castañeda, Isla S.; Sikes, Elisabeth L.; Vlamakis, Hera; Kolter, Roberto

2015-01-01

The microalga Emiliania huxleyi produces alkenone lipids which are important proxies for estimating past sea surface temperatures. Field calibrations of this proxy are robust but highly variable results are obtained in culture. Here we present results suggesting that algal-bacterial interactions may be responsible for some of this variability. Co-cultures of E. huxleyi and the bacterium Phaeobacter inhibens resulted in a 2.5-fold decrease in algal alkenone-containing lipid bodies. In addition levels of unsaturated alkenones increase in co-cultures. These changes result in an increase in the reconstructed growth temperature of up to 2°C relative to axenic algal cultures. PMID:26987094
Bile acids override steatosis in farnesoid X receptor deficient mice in a model of non-alcoholic steatohepatitis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wu, Weibin; Liu, Xijun; Peng, Xiaomin

Highlights: • FXR deficiency enhanced MCD diet-induced hepatic fibrosis. • FXR deficiency attenuated MCD diet-induced hepatic steatosis. • FXR deficiency repressed genes involved in fatty acid uptake and triglyceride accumulation. - Abstract: Non-alcoholic fatty liver disease (NAFLD) is one of the most common liver diseases, and the pathogenesis is still not well known. The farnesoid X receptor (FXR) is a member of the nuclear hormone receptor superfamily and plays an essential role in maintaining bile acid and lipid homeostasis. In this study, we study the role of FXR in the pathogenesis of NFALD. We found that FXR deficient (FXR{sup −/−})more » mice fed methionine- and choline-deficient (MCD) diet had higher serum ALT and AST activities and lower hepatic triglyceride levels than wild-type (WT) mice fed MCD diet. Expression of genes involved in inflammation (VCAM-1) and fibrosis (α-SMA) was increased in FXR{sup −/−} mice fed MCD diet (FXR{sup −/−}/MCD) compared to WT mice fed MCD diet (WT/MCD). Although MCD diet significantly induced hepatic fibrosis in terms of liver histology, FXR{sup −/−}/MCD mice showed less degree of hepatic steatosis than WT/MCD mice. Moreover, FXR deficiency synergistically potentiated the elevation effects of MCD diet on serum and hepatic bile acids levels. The super-physiological concentrations of hepatic bile acids in FXR{sup −/−}/MCD mice inhibited the expression of genes involved in fatty acid uptake and triglyceride accumulation, which may be an explanation for less steatosis in FXR{sup −/−}/MCD mice in contrast to WT/MCD mice. These results suggest that hepatic bile acids accumulation could override simple steatosis in hepatic injury during the progression of NAFLD and further emphasize the role of FXR in maintaining hepatic bile acid homeostasis in liver disorders and in hepatic protection.« less
Simulation of ferromagnetic nanomaterial flow of Maxwell fluid

NASA Astrophysics Data System (ADS)

Hayat, T.; Ahmad, Salman; Khan, M. Ijaz; Alsaedi, A.

2018-03-01

Ferromagnetic flow of rate type liquid over a stretched surface is addressed in this article. Heat and mass transport are investigated with Brownian movement and thermophoresis effects. Magnetic dipole is also taken into consideration. Procedure of similarity transformation is employed. The obtained nonlinear expressions have been tackled numerically by means of Shooting method. Graphical results are shown and analyzed for the impact of different variables. Temperature and concentration gradients are numerically computed in Tables 1 and 2. The results described here demonstrate that ferromagnetic variable boosts the thermal field. It is noticed that velocity and concentration profiles are higher when elastic and thermophoresis variables are enhanced.
Detection and attribution of temperature changes in the mountainous Western United States

USGS Publications Warehouse

Bonfils, Celine; Santer, B.D.; Pierce, D.W.; Hidalgo, H.G.; Bala, G.; Das, T.; Barnett, T.P.; Cayan, D.R.; Doutriaux, C.; Wood, A.W.; Mirin, A.; Nozawa, T.

2008-01-01

Large changes in the hydrology of the western United States have been observed since the mid-twentieth century. These include a reduction in the amount of precipitation arriving as snow, a decline in snowpack at low and midelevations, and a shift toward earlier arrival of both snowmelt and the centroid (center of mass) of streamflows. To project future water supply reliability, it is crucial to obtain a better understanding of the underlying cause or causes for these changes. A regional warming is often posited as the cause of these changes without formal testing of different competitive explanations for the warming. In this study, a rigorous detection and attribution analysis is performed to determine the causes of the late winter/early spring changes in hydrologically relevant temperature variables over mountain ranges of the western United States. Natural internal climate variability, as estimated from two long control climate model simulations, is insufficient to explain the rapid increase in daily minimum and maximum temperatures, the sharp decline in frost days, and the rise in degree-days above 0??C (a simple proxy for temperature driven snowmelt). These observed changes are also inconsistent with the model-predicted responses to variability in solar irradiance and volcanic activity. The observations are consistent with climite simulations that include the combined effects of anthropogenic greenhouse gases and aerosols. It is found that, for each temperature variable considered, an anthropogenic signal is identifiable in observational fields. The results are robust to uncertainties in model-estimated fingerprints and natural variability noise, to the choice of statistical down-scaling method, and to various processing options in the detection and attribution method. ?? 2008 American Meteorological Society.
Vertical temperature profile and mesospheric winds retrieval on Mars from CO ;millimeter observations. Comparison with general circulation model predictions

NASA Astrophysics Data System (ADS)

Cavalié, T.; Billebaud, F.; Encrenaz, T.; Dobrijevic, M.; Brillet, J.; Forget, F.; Lellouch, E.

2008-10-01

Aims: We have recorded high spectral resolution spectra and derived precise atmospheric temperature profiles and wind velocities in the atmosphere of Mars. We have compared observations of the planetary mean thermal profile and mesospheric wind velocities on the disk, obtained with our millimetric observations of CO rotational lines, to predictions from the Laboratoire de Météorologie Dynamique (LMD) Mars General Circulation Model, as provided through the Mars Climate Database (MCD) numerical tool. Methods: We observed the atmosphere of Mars at CO(1-0) and CO(2-1) wavelengths with the IRAM 30-m antenna in June 2001 and November 2005. We retrieved the mean thermal profile of the planet from high and low spectral resolution data with an inversion method detailed here. High spectral resolution spectra were used to derive mesospheric wind velocities on the planetary disk. We also report here the use of 13CO(2-1) line core shifts to measure wind velocities at 40 km. Results: Neither the Mars Year 24 (MY24) nor the Dust Storm scenario from the Mars Climate Database (MCD) provides satisfactory fits to the 2001 and 2005 data when retrieving the thermal profiles. The Warm scenario only provides good fits for altitudes lower than 30 km. The atmosphere is warmer than predicted up to 60 km and then becomes colder. Dust loading could be the reason for this mismatch. The MCD MY24 scenario predicts a thermal inversion layer between 40 and 60 km, which is not retrieved from the high spectral resolution data. Our results are generally in agreement with other observations from 10 to 40 km in altitude, but our results obtained from the high spectral resolution spectra differ in the 40-70 km layer, where the instruments are the most sensitive. The wind velocities we retrieve from our 12CO observations confirm MCD predictions for 2001 and 2005. Velocities obtained from 13CO observations are consistent with MCD predictions in 2001, but are lower than predicted in 2005.
Individual and collective modes of surface magnetoplasmon in thiolate-protected silver nanoparticles studied by MCD spectroscopy.

PubMed

Yao, Hiroshi; Shiratsu, Taisuke

2016-06-07

Large magneto-optical (MO) responses at the energy of localized surface plasmon resonance (LSPR), namely, surface magnetoplasmons, are demonstrated for the first time in thiolate-protected silver nanoparticles with magnetic circular dichroism (MCD) spectroscopy. The samples examined are decanethiol (DT)-, azobenzenethiol (ABT)-, and ABT/DT mixed-monolayer-protected Ag nanoparticles. ABT-protected Ag nanoparticles are somewhat aggregated and thus exhibit a broad, collective mode of plasmonic absorption, whereas other samples with highly-dispersed nanoparticles show an individual mode of LSPR absorption. In all Ag nanoparticles, a derivative-like MCD signal is observed under an applied magnetic field of 1.6 T, which can be explained in terms of two circular modes of magnetoplasmon caused by the increase (or decrease) in the Lorentz force imparted on the free electrons that oscillate in the left (or right) circular orbits in the nanosphere. For the Ag nanoparticles exhibiting an individual LSPR mode, in particular, simultaneous deconvolution analysis of UV-vis absorption and MCD spectra reveal that (i) the amplitude of the magnetoplasmonic component with lower frequency (ω-), resulting from the reduction in the confinement strength of collective electrons by the Lorentz force, is stronger than that with a higher frequency (ω+); (ii) the accurate shift or cyclotron frequency between two magnetoplasmonic modes (ωc = ω+-ω-) is size-dependent, and presents a very large value with implications for the apparent enhancement of the local magnetic-field in the Ag nanoparticles. These results strongly suggest that the Ag-thiolate layer or Ag-S bonding on the nanoparticle surface plays a significant role in the MO enhancement.
A high field and cryogenic test facility for neutron irradiated superconducting wire

NASA Astrophysics Data System (ADS)

Nishimura, A.; Miyata, H.; Yoshida, M.; Iio, M.; Suzuki, K.; Nakamoto, T.; Yamazaki, M.; Toyama, T.

2017-12-01

A 15.5 T superconducting magnet and a variable temperature insert (VTI) system were installed at a radiation control area in Oarai center in Tohoku University to investigate the superconducting properties of activated superconducting materials by fast neutron. The superconductivity was measured at cryogenic temperature and high magnetic field. During these tests, some inconvenient problems were observed and the additional investigation was carried out. The variable temperature insert was designed and assembled to perform the superconducting property tests. without the liquid helium. To remove the heat induced by radiation and joule heating, high purity aluminum rod was used in VTI. The thermal contact was checked by FEM analysis and an additional support was added to confirm the decreasing the stress concentration and the good thermal contact. After the work for improvement, it was affirmed that the test system works well and all troubles were resolved. In this report, the improved technical solution is described and the first data set on the irradiation effect on Nb3Sn wire is presented.
Internal variability of fine-scale components of meteorological fields in extended-range limited-area model simulations with atmospheric and surface nudging

NASA Astrophysics Data System (ADS)

Separovic, Leo; Husain, Syed Zahid; Yu, Wei

2015-09-01

Internal variability (IV) in dynamical downscaling with limited-area models (LAMs) represents a source of error inherent to the downscaled fields, which originates from the sensitive dependence of the models to arbitrarily small modifications. If IV is large it may impose the need for probabilistic verification of the downscaled information. Atmospheric spectral nudging (ASN) can reduce IV in LAMs as it constrains the large-scale components of LAM fields in the interior of the computational domain and thus prevents any considerable penetration of sensitively dependent deviations into the range of large scales. Using initial condition ensembles, the present study quantifies the impact of ASN on IV in LAM simulations in the range of fine scales that are not controlled by spectral nudging. Four simulation configurations that all include strong ASN but differ in the nudging settings are considered. In the fifth configuration, grid nudging of land surface variables toward high-resolution surface analyses is applied. The results show that the IV at scales larger than 300 km can be suppressed by selecting an appropriate ASN setup. At scales between 300 and 30 km, however, in all configurations, the hourly near-surface temperature, humidity, and winds are only partly reproducible. Nudging the land surface variables is found to have the potential to significantly reduce IV, particularly for fine-scale temperature and humidity. On the other hand, hourly precipitation accumulations at these scales are generally irreproducible in all configurations, and probabilistic approach to downscaling is therefore recommended.
A novel SOI LDMOS with substrate field plate and variable-k dielectric buried layer

NASA Astrophysics Data System (ADS)

Li, Qi; Wen, Yi; Zhang, Fabi; Li, Haiou; Xiao, Gongli; Chen, Yonghe; Fu, Tao

2018-09-01

A novel silicon-on-insulator (SOI) lateral double-diffused metal-oxide-semiconductor (LDMOS) structure has been proposed. The new structure features a substrate field plate (SFP) and a variable-k dielectric buried layer (VKBL). The SFP and VKBL improve the breakdown voltage by introducing new electric field peaks in the surface electric field distribution. Moreover, the SFP reduces the specific ON-resistance through an enhanced auxiliary depletion effect on the drift region. The simulation results indicate that compared to the conventional SOI LDMOS structure, the breakdown voltage is improved from 118 V to 221 V, the specific ON-resistance is decreased from 7.15 mΩ·cm2 to 3.81 mΩ·cm2, the peak value of surface temperature is declined by 38 K.
Assessing Northern Hemisphere Land-Atmosphere Hotspots Using Dynamical Adjustment

NASA Astrophysics Data System (ADS)

Merrifield, Anna; Lehner, Flavio; Deser, Clara; Xie, Shang-Ping

2017-04-01

Understanding the influence of soil moisture on surface air temperature (SAT) is made more challenging by large-scale, internal atmospheric variability present in the midlatitude summer atmosphere. In this study, dynamical adjustment is used to characterize and remove summer SAT variability associated with large-scale circulation patterns in the Community Earth System Model large ensemble (CESM-LE). The adjustment is performed over North America and Europe with two different circulation indicators: sea level pressure (SLP) and 500mb height (Z500). The removal of dynamical "noise" leaves residual SAT variability in the central U.S. and Mediterranean regions identified as hotspots of land-atmosphere interaction (e.g. Koster et al. 2004, Seneviratne et al. 2006). The residual SAT variability "signal" is not clearly related to modes of sea surface temperature (SST) variability, but is related to local soil moisture, evaporative fraction, and radiation availability. These local relationships suggest that residual SAT variability is representative of the aggregate land surface signal. SLP dynamical adjustment removes ˜15% more variability in the central U.S. hotspot region than Z500 dynamical adjustment. Similar amounts of variability are removed by SLP and Z500 in the Mediterranean region. Differences in SLP and Z500 signal magnitude in the central U.S. are likely due to the modification of SLP by local land surface conditions, while the proximity of European hotspots to the Mediterranean sea mitigates the land surface influence. Variations in the Z500 field more closely resemble large-scale midlatitude circulation patterns and therefore Z500 may be a more suitable circulation indicator for summer dynamical adjustment. Changes in the residual SAT variability signal under increased greenhouse gas forcing will also be explored.
DOE Office of Scientific and Technical Information (OSTI.GOV)

Ahmed, A.; Chadwick, T.; Makhlouf, M.

This paper deals with the effects of various solidification variables such as cooling rate, temperature gradient, solidification rate, etc. on the microstructure and shrinkage defects in aluminum alloy (A356) castings. The effects are first predicted using commercial solidification modeling softwares and then verified experimentally. For this work, the authors are considering a rectangular bar cast in a sand mold. Simulation is performed using SIMULOR, a finite volume based casting simulation program. Microstructural variables such as dendritic arm spacing (DAS) and defects (percentage porosity) are calculated from the temperature fields, cooling rate, solidification time, etc. predicted by the computer softwares. Themore » same variables are then calculated experimentally in the foundry. The test piece is cast in a resin (Sodium Silicate) bonded sand mold and the DAS and porosity variables are calculated using Scanning Electron Microscopy and Image Analysis. The predictions from the software are compared with the experimental results. The results are presented and critically analyzed to determine the quality of the predicted results. The usefulness of the commercial solidification modeling softwares as a tool for the foundry are also discussed.« less
A Survey of Spatial and Seasonal Water Isotope Variability on the Juneau Icefield, Alaksa

NASA Astrophysics Data System (ADS)

Dennis, D.; Carter, A.; Clinger, A. E.; Eads, O. L.; Gotwals, S.; Gunderson, J.; Hollyday, A. E.; Klein, E. S.; Markle, B. R.; Timms, J. R.

2015-12-01

The depletion of stable oxygen-hydrogen isotopes (δ18O and δH) is well correlated with temperature change, which is driven by variation in topography, climate, and atmospheric circulation. This study presents a survey of the spatial and seasonal variability of isotopic signatures on the Juneau Icefield (JI), Alaska, USA which spans over 3,000 square-kilometers. To examine small scale variability in the previous year's accumulation, samples were taken at regular intervals from snow pits and a one square-kilometer surficial grid. Surface snow samples were collected across the icefield to evaluate large scale variability, ranging approximately 1,000 meters in elevation and 100 kilometers in distance. Individual precipitation events were also sampled to track percolation throughout the snowpack and temperature correlations. A survey of this extent has never been undertaken on the JI. Samples were analyzed in the field using a Los Gatos laser isotope analyzer. This survey helps us better understand isotope fractionation on temperate glaciers in coastal environments and provides preliminary information on the suitability of the JI for a future ice core drilling project.
Development of a rapid soil water content detection technique using active infrared thermal methods for in-field applications.

PubMed

Antonucci, Francesca; Pallottino, Federico; Costa, Corrado; Rimatori, Valentina; Giorgi, Stefano; Papetti, Patrizia; Menesatti, Paolo

2011-01-01

The aim of this study was to investigate the suitability of active infrared thermography and thermometry in combination with multivariate statistical partial least squares analysis as rapid soil water content detection techniques both in the laboratory and the field. Such techniques allow fast soil water content measurements helpful in both agricultural and environmental fields. These techniques, based on the theory of heat dissipation, were tested by directly measuring temperature dynamic variation of samples after heating. For the assessment of temperature dynamic variations data were collected during three intervals (3, 6 and 10 s). To account for the presence of specific heats differences between water and soil, the analyses were regulated using slopes to linearly describe their trends. For all analyses, the best model was achieved for a 10 s slope. Three different approaches were considered, two in the laboratory and one in the field. The first laboratory-based one was centred on active infrared thermography, considered measurement of temperature variation as independent variable and reported r = 0.74. The second laboratory-based one was focused on active infrared thermometry, added irradiation as independent variable and reported r = 0.76. The in-field experiment was performed by active infrared thermometry, heating bare soil by solar irradiance after exposure due to primary tillage. Some meteorological parameters were inserted as independent variables in the prediction model, which presented r = 0.61. In order to obtain more general and wide estimations in-field a Partial Least Squares Discriminant Analysis on three classes of percentage of soil water content was performed obtaining a high correct classification in the test (88.89%). The prediction error values were lower in the field with respect to laboratory analyses. Both techniques could be used in conjunction with a Geographic Information System for obtaining detailed information on soil heterogeneity.
Development of a Rapid Soil Water Content Detection Technique Using Active Infrared Thermal Methods for In-Field Applications

PubMed Central

Antonucci, Francesca; Pallottino, Federico; Costa, Corrado; Rimatori, Valentina; Giorgi, Stefano; Papetti, Patrizia; Menesatti, Paolo

2011-01-01

The aim of this study was to investigate the suitability of active infrared thermography and thermometry in combination with multivariate statistical partial least squares analysis as rapid soil water content detection techniques both in the laboratory and the field. Such techniques allow fast soil water content measurements helpful in both agricultural and environmental fields. These techniques, based on the theory of heat dissipation, were tested by directly measuring temperature dynamic variation of samples after heating. For the assessment of temperature dynamic variations data were collected during three intervals (3, 6 and 10 s). To account for the presence of specific heats differences between water and soil, the analyses were regulated using slopes to linearly describe their trends. For all analyses, the best model was achieved for a 10 s slope. Three different approaches were considered, two in the laboratory and one in the field. The first laboratory-based one was centred on active infrared thermography, considered measurement of temperature variation as independent variable and reported r = 0.74. The second laboratory–based one was focused on active infrared thermometry, added irradiation as independent variable and reported r = 0.76. The in-field experiment was performed by active infrared thermometry, heating bare soil by solar irradiance after exposure due to primary tillage. Some meteorological parameters were inserted as independent variables in the prediction model, which presented r = 0.61. In order to obtain more general and wide estimations in-field a Partial Least Squares Discriminant Analysis on three classes of percentage of soil water content was performed obtaining a high correct classification in the test (88.89%). The prediction error values were lower in the field with respect to laboratory analyses. Both techniques could be used in conjunction with a Geographic Information System for obtaining detailed information on soil heterogeneity. PMID:22346632
Development of criteria for the use of asphalt-rubber as a Stress-Absorbing Membrane Interlayer (SAMI)

NASA Astrophysics Data System (ADS)

Newcomb, D. E.; McKeen, R. G.

1983-12-01

This report documents over 2 years of research efforts to characterize asphalt-rubber mixtures to be used in Stress-Absorbing Membrane Interlayers (SAMI). The purpose of these SAMIs is to retard or prevent reflection cracking in asphalt-concrete overlays. Several laboratory experiments and one field trial were conducted to define significant test methods and parameters for incorporation into construction design and specification documents. Test methods used in this study included a modified softening point test, force-ductility, and Schweyer viscosity. Variables investigated included (1) Laboratory-mixing temperature; (2) Rubber type; (3) Laboratory storage time; (4) Laboratory storage condition; (5) Laboratory batch replication; (6) Laboratory mixing time; (7) Field mixing time; (8) Laboratory test temperature; (9) Force-Ductility elongation rates; and (10) Asphalt grade. It was found that mixing temperature, mixing time, rubber type, and asphalt grade all have significant effects upon the behavior of asphalt-rubber mixtures. Significant variability was also noticed in different laboratory batch replications. Varying laboratory test temperature and force-ductility elongation rate revealed further differences in asphalt-rubber mixtures.
Last millennium Northern Hemisphere summer temperatures from tree rings: Part II, spatially resolved reconstructions

NASA Astrophysics Data System (ADS)

Anchukaitis, Kevin J.; Wilson, Rob; Briffa, Keith R.; Büntgen, Ulf; Cook, Edward R.; D'Arrigo, Rosanne; Davi, Nicole; Esper, Jan; Frank, David; Gunnarson, Björn E.; Hegerl, Gabi; Helama, Samuli; Klesse, Stefan; Krusic, Paul J.; Linderholm, Hans W.; Myglan, Vladimir; Osborn, Timothy J.; Zhang, Peng; Rydval, Milos; Schneider, Lea; Schurer, Andrew; Wiles, Greg; Zorita, Eduardo

2017-05-01

Climate field reconstructions from networks of tree-ring proxy data can be used to characterize regional-scale climate changes, reveal spatial anomaly patterns associated with atmospheric circulation changes, radiative forcing, and large-scale modes of ocean-atmosphere variability, and provide spatiotemporal targets for climate model comparison and evaluation. Here we use a multiproxy network of tree-ring chronologies to reconstruct spatially resolved warm season (May-August) mean temperatures across the extratropical Northern Hemisphere (40-90°N) using Point-by-Point Regression (PPR). The resulting annual maps of temperature anomalies (750-1988 CE) reveal a consistent imprint of volcanism, with 96% of reconstructed grid points experiencing colder conditions following eruptions. Solar influences are detected at the bicentennial (de Vries) frequency, although at other time scales the influence of insolation variability is weak. Approximately 90% of reconstructed grid points show warmer temperatures during the Medieval Climate Anomaly when compared to the Little Ice Age, although the magnitude varies spatially across the hemisphere. Estimates of field reconstruction skill through time and over space can guide future temporal extension and spatial expansion of the proxy network.
The seasonal response of the Held-Suarez climate model to prescribed ocean temperature anomalies. I - Results of decadal integrations

NASA Technical Reports Server (NTRS)

Phillips, T. J.; Semtner, A. J., Jr.

1984-01-01

Anomalies in ocean surface temperature have been identified as possible causes of variations in the climate of particular seasons or as a source of interannual climatic variability, and attempts have been made to forecast seasonal climate by using ocean temperatures as predictor variables. However, the seasonal atmospheric response to ocean temperature anomalies has not yet been systematically investigated with nonlinear models. The present investigation is concerned with ten-year integrations involving a model of intermediate complexity, the Held-Suarez climate model. The calculations have been performed to investigate the changes in seasonal climate which result from a fixed anomaly imposed on a seasonally varying, global ocean temperature field. Part I of the paper provides a report on the results of these decadal integrations. Attention is given to model properties, the experimental design, and the anomaly experiments.

Novel Integration of a 6t Cryogen-Free Magneto-Optical System with a Variable Temperature Sample Using a Single Cryocooler

NASA Astrophysics Data System (ADS)

Berryhill, A. B.; Coffey, D. M.; McGhee, R. W.; Burkhardt, E. E.

2008-03-01

Cryomagnetics' new "C-Mag Optical" Magneto-Optic Property Measurement System is a versatile materials and device characterization system that allows the researcher to simultaneously control the applied magnetic field and temperature of a sample while studying its electrical and optic properties. The system integrates a totally liquid cryogen-free 6T superconducting split-pair magnet with a variable temperature sample space, both cooled using a single 4.2K pulse tube refrigerator. To avoid warming the magnet when operating a sample at elevated temperatures, a novel heat switch was developed. The heat switch allows the sample temperature to be varied from 10K to 300K while maintaining the magnet at 4.2K or below. In this paper, the design and performance of the overall magnet system and the heat switch will be presented. New concepts for the next generation system will also be discussed.
Summer temperature variation and implications for juvenile Atlantic salmon

USGS Publications Warehouse

Mather, M. E.; Parrish, D.L.; Campbell, C.A.; McMenemy, J.R.; Smith, Joseph M.

2008-01-01

Temperature is important to fish in determining their geographic distribution. For cool- and cold-water fish, thermal regimes are especially critical at the southern end of a species' range. Although temperature is an easy variable to measure, biological interpretation is difficult. Thus, how to determine what temperatures are meaningful to fish in the field is a challenge. Herein, we used the Connecticut River as a model system and Atlantic salmon (Salmo salar) as a model species with which to assess the effects of summer temperatures on the density of age 0 parr. Specifically, we asked: (1) What are the spatial and temporal temperature patterns in the Connecticut River during summer? (2) What metrics might detect effects of high temperatures? and (3) How is temperature variability related to density of Atlantic salmon during their first summer? Although the most southern site was the warmest, some northern sites were also warm, and some southern sites were moderately cool. This suggests localized, within basin variation in temperature. Daily and hourly means showed extreme values not apparent in the seasonal means. We observed significant relationships between age 0 parr density and days at potentially stressful, warm temperatures (???23??C). Based on these results, we propose that useful field reference points need to incorporate the synergistic effect of other stressors that fish encounter in the field as well as the complexity associated with cycling temperatures and thermal refuges. Understanding the effects of temperature may aid conservation efforts for Atlantic salmon in the Connecticut River and other North Atlantic systems. ?? 2008 Springer Science+Business Media B.V.
Modeling sea-surface temperature and its variability

NASA Technical Reports Server (NTRS)

Sarachik, E. S.

1985-01-01

A brief review is presented of the temporal scales of sea surface temperature variability. Progress in modeling sea surface temperature, and remaining obstacles to the understanding of the variability is discussed.
Development and Testing of a Coupled Ocean-atmosphere Mesoscale Ensemble Prediction System

DTIC Science & Technology

2011-06-28

wind, temperature, and moisture variables, while the oceanographic ET is derived from ocean current, temperature, and salinity variables. Estimates of...wind, temperature, and moisture variables while the oceanographic ET is derived from ocean current temperature, and salinity variables. Estimates of...uncertainty in the model. Rigorously accurate ensemble methods for describing the distribution of future states given past information include particle
Hepatoprotective Effect and Synergism of Bisdemethoycurcumin against MCD Diet-Induced Nonalcoholic Fatty Liver Disease in Mice

PubMed Central

Lee, Young-Seob; Han, Sin-Hee; Ahn, Young-Sup; Cha, Seon-Woo; Seo, Yun-Soo; Kong, Ryong; Kwon, Dong-Yeul

2016-01-01

Nonalcoholic fatty liver disease (NAFLD), the hepatic manifestation of the metabolic syndrome, has become one of the most common causes of chronic liver disease over the last decade in developed countries. NAFLD includes a spectrum of pathological hepatic changes, such as steatosis, steatohepatitis, advanced fibrosis, and cirrhosis. Bisdemethoxycurcumin (BDMC) is polyphenolic compounds with a diarylheptanoid skeleton, curcumin close analogues, which is derived from the Curcumae Longae Rhizoma. While the rich bioavailability research of curcumin, BDMC is the poor studies. We investigated whether BDMC has the hepatoprotective effect and combinatory preventive effect with silymarin on methionine choline deficient (MCD)-diet-induced NAFLD in C57BL/6J mice. C57BL/6J mice were divided into five groups of normal (normal diet without any treatment), MCD diet (MCD diet only), MCD + silymarin (SIL) 100 mg/kg group, MCD + BDMC 100 mg/kg group, MCD + SIL 50 mg/kg + BDMC 50 mg/kg group. Body weight, liver weight, liver function tests, histological changes were assessed and quantitative real-time polymerase chain reaction and Western blot analyses were conducted after 4 weeks. Mice lost body weight on the MCD-diet, but BDMC did not lose less than the MCD-diet group. Liver weights decreased from BDMC, but they increased significantly in the MCD-diet groups. All liver function test values decreased from the MCD-diet, whereas those from the BDMC increased significantly. The MCD- diet induced severe hepatic fatty accumulation, but the fatty change was reduced in the BDMC. The BDMC showed an inhibitory effect on liver lipogenesis by reducing associated gene expression caused by the MCD-diet. In all experiments, the combinations of BDMC with SIL had a synergistic effect against MCD-diet models. In conclusion, our findings indicate that BDMC has a potential suppressive effect on NAFLD. Therefore, our data suggest that BDMC may act as a novel and potent therapeutic agent against NAFLD. PMID:26881746
Immunophenotypes of macular corneal dystrophy in India and correlation with mutations in CHST6

PubMed Central

Klintworth, Gordon K.; Thonar, Eugene J-M.A.; Vemuganti, Geeta K.; Kannabiran, Chitra

2009-01-01

Purpose To determine the immunophenotypes of macular corneal dystrophy (MCD) in Indian patients and to correlate them with mutations in the carbohydrate 6-sulfotransferase (CHST6) gene. Methods Sixty-four patients from 53 families with MCD that were previously screened for mutations in CHST6 were included in an immunophenotype analysis. Antigenic keratan sulfate (AgKS) in serum as well as corneal tissue was evaluated in 31 families. Only cornea was evaluated in 11 families, and only serum was evaluated in 11 families. AgKS was detected in formalin-fixed, paraffin-embedded corneal sections by immunohistochemistry and in serum by ELISA using a monoclonal antibody against sulfated forms of KS in patients with MCD as well as normal controls. Results Analysis of corneal and/or serum AgKS disclosed MCD type I (27 families), MCD type IA (5 families), and MCD type II (3 families) in the cases studied. An additional 10 families were either MCD type I or MCD type IA since only serum AgKS data were available. Seven families manifested atypical immunophenotypes since the corneal AgKS expression was either of MCD type I or MCD type IA, but serum AgKS levels ranged from 19 ng/ml to 388 ng/ml. More than one immunophenotype was detected amongst siblings in two families. Each immunophenotype was associated with mutational heterogeneity in CHST6. Conclusions MCD type I was the predominant immunophenotype in the Indian population studied followed by MCD type IA and then MCD type II. We detected further immunophenotypic heterogeneity by finding atypical patterns of AgKS reactivity in a subset of families. There were no simple correlations between immunophenotypes and specific mutations in CHST6, suggesting that factors other than CHST6 mutations may be contributing to the immunophenotypes in MCD. PMID:19204788
Hepatoprotective Effect and Synergism of Bisdemethoycurcumin against MCD Diet-Induced Nonalcoholic Fatty Liver Disease in Mice.

PubMed

Kim, Sung-Bae; Kang, Ok-Hwa; Lee, Young-Seob; Han, Sin-Hee; Ahn, Young-Sup; Cha, Seon-Woo; Seo, Yun-Soo; Kong, Ryong; Kwon, Dong-Yeul

2016-01-01

Nonalcoholic fatty liver disease (NAFLD), the hepatic manifestation of the metabolic syndrome, has become one of the most common causes of chronic liver disease over the last decade in developed countries. NAFLD includes a spectrum of pathological hepatic changes, such as steatosis, steatohepatitis, advanced fibrosis, and cirrhosis. Bisdemethoxycurcumin (BDMC) is polyphenolic compounds with a diarylheptanoid skeleton, curcumin close analogues, which is derived from the Curcumae Longae Rhizoma. While the rich bioavailability research of curcumin, BDMC is the poor studies. We investigated whether BDMC has the hepatoprotective effect and combinatory preventive effect with silymarin on methionine choline deficient (MCD)-diet-induced NAFLD in C57BL/6J mice. C57BL/6J mice were divided into five groups of normal (normal diet without any treatment), MCD diet (MCD diet only), MCD + silymarin (SIL) 100 mg/kg group, MCD + BDMC 100 mg/kg group, MCD + SIL 50 mg/kg + BDMC 50 mg/kg group. Body weight, liver weight, liver function tests, histological changes were assessed and quantitative real-time polymerase chain reaction and Western blot analyses were conducted after 4 weeks. Mice lost body weight on the MCD-diet, but BDMC did not lose less than the MCD-diet group. Liver weights decreased from BDMC, but they increased significantly in the MCD-diet groups. All liver function test values decreased from the MCD-diet, whereas those from the BDMC increased significantly. The MCD- diet induced severe hepatic fatty accumulation, but the fatty change was reduced in the BDMC. The BDMC showed an inhibitory effect on liver lipogenesis by reducing associated gene expression caused by the MCD-diet. In all experiments, the combinations of BDMC with SIL had a synergistic effect against MCD-diet models. In conclusion, our findings indicate that BDMC has a potential suppressive effect on NAFLD. Therefore, our data suggest that BDMC may act as a novel and potent therapeutic agent against NAFLD.
MCD-induced steatohepatitis is associated with hepatic adiponectin resistance and adipogenic transformation of hepatocytes.

PubMed

Larter, Claire Z; Yeh, Matthew M; Williams, Jacqueline; Bell-Anderson, Kim S; Farrell, Geoffrey C

2008-09-01

In these studies, we tested the hypothesis that increased lipid intake would exacerbate the severity of nutritional steatohepatitis. C57Bl/6J mice were fed methionine-and-choline deficient (MCD) diets containing 20% (high) or 5% (low) fat by weight for 3 weeks and compared to lipid-matched controls. MCD feeding increased serum ALT levels and induced hepatic steatosis, lobular inflammation and ballooning degeneration of hepatocytes, irrespective of dietary fat content. Hepatic triglyceride accumulation was similar between high and low-fat MCD-fed mice, but lipoperoxide levels were approximately 3-fold higher in the high-fat MCD-fed animals. Serum adiponectin levels increased in MCD-fed mice, although to a lesser extent in high-fat fed animals. AMPK phosphorylation was correspondingly increased in muscle of MCD-fed mice, but hepatic AMPK phosphorylation decreased, and there was little evidence of PPAR alpha activation, suggesting impaired adiponectin action in the livers of MCD-fed animals. Hepatocyte PPAR gamma mRNA levels increased in MCD-fed mice, and were associated with increased aP2 expression, indicating adipogenic transformation of hepatocytes. Increased dietary lipid intake did not alter steatohepatitis severity in MCD-fed mice despite increased lipoperoxide accumulation. Instead, steatohepatitis was associated with impaired hepatic adiponectin action, and adipogenic transformation of hepatocytes in both low and high-fat MCD-fed mice.
Two-Layer Variable Infiltration Capacity Land Surface Representation for General Circulation Models

NASA Technical Reports Server (NTRS)

Xu, L.

1994-01-01

A simple two-layer variable infiltration capacity (VIC-2L) land surface model suitable for incorporation in general circulation models (GCMs) is described. The model consists of a two-layer characterization of the soil within a GCM grid cell, and uses an aerodynamic representation of latent and sensible heat fluxes at the land surface. The effects of GCM spatial subgrid variability of soil moisture and a hydrologically realistic runoff mechanism are represented in the soil layers. The model was tested using long-term hydrologic and climatalogical data for Kings Creek, Kansas to estimate and validate the hydrological parameters. Surface flux data from three First International Satellite Land Surface Climatology Project Field Experiments (FIFE) intensive field compaigns in the summer and fall of 1987 in central Kansas, and from the Anglo-Brazilian Amazonian Climate Observation Study (ABRACOS) in Brazil were used to validate the mode-simulated surface energy fluxes and surface temperature.
Overtone Mobility Spectrometry (Part 2): Theoretical Considerations of Resolving Power

PubMed Central

Valentine, Stephen J.; Stokes, Sarah T.; Kurulugama, Ruwan T.; Nachtigall, Fabiane M.; Clemmer, David E.

2009-01-01

The transport of ions through multiple drift regions is modeled in order to develop an equation that is useful for an understanding of the resolving power of an overtone mobility spectrometry (OMS) technique. It is found that resolving power is influenced by a number of experimental variables, including those that define ion mobility spectrometry (IMS) resolving power: drift field (E), drift region length (L), and buffer gas temperature (T). However, unlike IMS, the resolving power of OMS is also influenced by the number of drift regions (n), harmonic frequency value (m), and the phase number (ϕ) of the applied drift field. The OMS resolving power dependence upon the new OMS variables (n, m, and ϕ) scales differently than the square root dependence of the E, L, and T variables in IMS. The results provide insight about optimal instrumental design and operation. PMID:19230705
Future hotspots of increasing temperature variability in tropical countries

NASA Astrophysics Data System (ADS)

Bathiany, S.; Dakos, V.; Scheffer, M.; Lenton, T. M.

2017-12-01

Resolving how climate variability will change in future is crucial to determining how challenging it will be for societies and ecosystems to adapt to climate change. We show that the largest increases in temperature variability - that are robust between state-of-the art climate models - are concentrated in tropical countries. On average, temperature variability increases by 15% per degree of global warming in Amazonia and Southern Africa during austral summer, and by up to 10% °C-1 in the Sahel, India and South East Asia. Southern hemisphere changes can be explained by drying soils, whereas shifts in atmospheric structure play a more important role in the Northern hemisphere. These robust regional changes in variability are associated with monthly timescale events, whereas uncertain changes in inter-annual modes of variability make the response of global temperature variability uncertain. Our results suggest that regional changes in temperature variability will create new inequalities in climate change impacts between rich and poor nations.
Characterizing Temperature Variability and Associated Large Scale Meteorological Patterns Across South America

NASA Astrophysics Data System (ADS)

Detzer, J.; Loikith, P. C.; Mechoso, C. R.; Barkhordarian, A.; Lee, H.

2017-12-01

South America's climate varies considerably owing to its large geographic range and diverse topographical features. Spanning the tropics to the mid-latitudes and from high peaks to tropical rainforest, the continent experiences an array of climate and weather patterns. Due to this considerable spatial extent, assessing temperature variability at the continent scale is particularly challenging. It is well documented in the literature that temperatures have been increasing across portions of South America in recent decades, and while there have been many studies that have focused on precipitation variability and change, temperature has received less scientific attention. Therefore, a more thorough understanding of the drivers of temperature variability is critical for interpreting future change. First, k-means cluster analysis is used to identify four primary modes of temperature variability across the continent, stratified by season. Next, composites of large scale meteorological patterns (LSMPs) are calculated for months assigned to each cluster. Initial results suggest that LSMPs, defined using meteorological variables such as sea level pressure (SLP), geopotential height, and wind, are able to identify synoptic scale mechanisms important for driving temperature variability at the monthly scale. Some LSMPs indicate a relationship with known recurrent modes of climate variability. For example, composites of geopotential height suggest that the Southern Annular Mode is an important, but not necessarily dominant, component of temperature variability over southern South America. This work will be extended to assess the drivers of temperature extremes across South America.
New Eclipsing Contact Binary System in Auriga

NASA Astrophysics Data System (ADS)

Austin, S. J.; Robertson, J. W.; Justice, C.; Campbell, R. T.; Hoskins, J.

2004-05-01

We present data on a newly discovered eclipsing binary system. The serendipitous discovery of this variable star was made by J.W. Robertson analyzing inhomogeneous ensemble photometry of stars in the field of the cataclysmic variable FS Aurigae from Indiana University RoboScope data. We obtained differential time-series BVR photometry during 2003 of this field variable using an ensemble of telescopes including the university observatories at ATU, UCA and joint ventures with amateur observatories in the state of Arkansas (Whispering Pines Observatory and Nubbin Ridge Observatory). The orbital period of this eclipsing system is 0.2508 days. The B-V light curve indicates colors of 1.2 around quadrature, to nearly 1.4 at primary eclipse. Binary star light curve models that best fit the BVR differential photometry suggest that the system is a contact binary overfilling the inner Roche Lobe by 12%, a primary component with a temperature of 4350K, a secondary component with a temperature of 3500K, a mass ratio of 0.37, and an inclination of 83 degrees. We present BVR light curves, an ephemeris, and best fit model parameters for the physical characteristics of this new eclipsing binary system.
Marli: Mars Lidar for Global Wind Profiles and Aerosol Profiles from Orbit

NASA Technical Reports Server (NTRS)

Abshire, J. B.; Guzewich, S. D.; Smith, M. D.; Riris, H.; Sun, X.; Gentry, B. M.; Yu, A.; Allan, G. R.

2016-01-01

The Mars Exploration Analysis Group's Next Orbiter Science Analysis Group (NEXSAG) has recently identified atmospheric wind measurements as one of 5 top compelling science objectives for a future Mars orbiter. To date, only isolated lander observations of martian winds exist. Winds are the key variable to understand atmospheric transport and answer fundamental questions about the three primary cycles of the martian climate: CO2, H2O, and dust. However, the direct lack of observations and imprecise and indirect inferences from temperature observations leave many basic questions about the atmospheric circulation unanswered. In addition to addressing high priority science questions, direct wind observations from orbit would help validate 3D general circulation models (GCMs) while also providing key input to atmospheric reanalyses. The dust and CO2 cycles on Mars are partially coupled and their influences on the atmospheric circulation modify the global wind field. Dust absorbs solar infrared radiation and its variable spatial distribution forces changes in the atmospheric temperature and wind fields. Thus it is important to simultaneously measure the height-resolved wind and dust profiles. MARLI provides a unique capability to observe these variables continuously, day and night, from orbit.
Coherence among the Northern Hemisphere land, cryosphere, and ocean responses to natural variability and anthropogenic forcing during the satellite era

NASA Astrophysics Data System (ADS)

Gonsamo, Alemu; Chen, Jing M.; Shindell, Drew T.; Asner, Gregory P.

2016-08-01

A lack of long-term measurements across Earth's biological and physical systems has made observation-based detection and attribution of climate change impacts to anthropogenic forcing and natural variability difficult. Here we explore coherence among land, cryosphere and ocean responses to recent climate change using 3 decades (1980-2012) of observational satellite and field data throughout the Northern Hemisphere. Our results show coherent interannual variability among snow cover, spring phenology, solar radiation, Scandinavian Pattern, and North Atlantic Oscillation. The interannual variability of the atmospheric peak-to-trough CO2 amplitude is mostly impacted by temperature-mediated effects of El Niño/Southern Oscillation (ENSO) and Pacific/North American Pattern (PNA), whereas CO2 concentration is affected by Polar Pattern control on sea ice extent dynamics. This is assuming the trend in anthropogenic CO2 emission remains constant, or the interannual changes in the trends are negligible. Our analysis suggests that sea ice decline-related CO2 release may outweigh increased CO2 uptake through longer growing seasons and higher temperatures. The direct effects of variation in solar radiation and leading teleconnections, at least in part via their impacts on temperature, dominate the interannual variability of land, cryosphere and ocean indicators. Our results reveal a coherent long-term changes in multiple physical and biological systems that are consistent with anthropogenic forcing of Earth's climate and inconsistent with natural drivers.
Observing temporal patterns of vertical flux through streambed sediments using time-series analysis of temperature records

NASA Astrophysics Data System (ADS)

Lautz, Laura K.

2012-09-01

SummaryRates of water exchange between surface water and groundwater (SW-GW) can be highly variable over time due to temporal changes in streambed hydraulic conductivity, storm events, and oscillation of stage due to natural and regulated river flow. There are few effective field methods available to make continuous measurements of SW-GW exchange rates with the temporal resolution required in many field applications. Here, controlled laboratory experiments were used to explore the accuracy of analytical solutions to the one-dimensional heat transport model for capturing temporal variability of flux through porous media from propagation of a periodic temperature signal to depth. Column experiments were used to generate one-dimensional flow of water and heat through saturated sand with a quasi-sinusoidal temperature oscillation at the upstream boundary. Measured flux rates through the column were compared to modeled flux rates derived using the computer model VFLUX and the amplitude ratio between filtered temperature records from two depths in the column. Imposed temporal changes in water flux through the column were designed to replicate observed patterns of flux in the field, derived using the same methodology. Field observations of temporal changes in flux were made over multiple days during a large-scale storm event and diurnally during seasonal baseflow recession. Temporal changes in flux that occur gradually over days, sub-daily, and instantaneously in time can be accurately measured using the one-dimensional heat transport model, although those temporal changes may be slightly smoothed over time. Filtering methods effectively isolate the time-variable amplitude and phase of the periodic temperature signal, effectively eliminating artificial temporal flux patterns otherwise imposed by perturbations of the temperature signal, which result from typical weather patterns during field investigations. Although previous studies have indicated that sub-cycle information from the heat transport model is not reliable, this laboratory experiment shows that the sub-cycle information is real and sub-cycle changes in flux can be observed using heat transport modeling. One-dimensional heat transport modeling provides an easy-to-implement, cost effective, reliable field tool for making continuous observations of SW-GW exchange through time, which may be particularly useful for monitoring exchange rates during storms and other conditions that create temporal change in hydraulic gradient across the streambed interface or change in streambed hydraulic conductivity.
Effects of climate change on phenology in two French LTER (Alps and Brittany) for the period 1998-2009

NASA Astrophysics Data System (ADS)

Perrimond, B.; Bigot, S.; Quénol, H.; Spielgelberger, T.; Baudry, J.

2012-04-01

Climate and vegetation are linked all over the world. In this study, we work on a seasonal weather classification based on air temperature and precipitation to deduce a link with different phenological stage (greening up, senescence, ...) over a 12 year period (1998-2009) for two different domains in France (Alps and Brittany). In temperate land, the main climatic variable with a potential effect on vegetation is the mean temperature followed by the rainfall deficit. A better understanding in season and their climatic characteristic is need to establish link between climate and phenology; so a weather classification is proposed based on empirical orthogonal functions and ascending hierarchical classification on atmospheric variables. This classification allows us to exhibit the inter-annual and intra-seasonal climatic spatiotemporal variability for both experimental site. Relationships between climate and phenology consist in a comparison between advance and delay in phenological stage and weather type issue from the classification. Experiment field are two french Long Term Ecological Research (LTER). The first one (LTER 'Alps' ) have mountain characteristics about 1000 to 4780 m ASL, ~65% of forest occupation ; the second one (LTER Armorique) is an Atlantic coastal landscape, 0-360 m ASL, ~70% of agricultural field. Climatic data are SAFRAN-France reanalysis which are developed to run SVAT model and come from the French meteorological service 'Météo-France'. All atmospheric variable needed to run a hydrological model are available (air temperature, rainfall/snowfall, wind speed, relative humidity, incoming/outcoming radiation) at a 8-8 km2 space resolution and with a daily time resolution. The phenological data are extracted from SPOT-VGT product 1-1 km2 space resolution and 10 days time resolution) by time series analysis process. Such of study is particularly important to understand relationships between environmental and ecological variables and it will allow to better predict ecological reaction under climate change constraint.
TAFRO syndrome: current perspectives.

PubMed

Sakashita, Kentaro; Murata, Kengo; Takamori, Mikio

2018-01-01

Multicentric Castleman's disease (MCD), a distinct subtype of Castleman's disease, is a rare, nonneoplastic, lymphoproliferative disorder. Patients with MCD present with systemic symptoms and multiple lymphadenopathy. Lymph node biopsy is necessary for the diagnosis of various histological MCD patterns including hyaline vascular, plasma cell, and mixed types. Human herpesvirus 8 (HHV8) infection was identified as an important etiology of MCD among immunocompromised patients such as those positive for human immunodeficiency virus. Although HHV8-negative MCD was reported in immunocompetent patients, the underlying etiology remains unknown. Several experts speculate that MCD in immunocompetent patients might be due to proinflammatory hypercytokinemia because of infection by a virus other than HHV8, inflammation, or neoplastic disease. In 2010, a distinct variant of HHV8-negative MCD reported in Japan was characterized by thrombocytopenia, anasarca, myelofibrosis, renal dysfunction, and organomegaly (TAFRO). Recent case reports and a systematic review suggest that TAFRO syndrome might have a unique pathogenesis among HHV8-negative MCD variants. This review introduces TAFRO syndrome as a subtype of HHV8-negative MCD and offers an overview of the current perspectives on this syndrome.
Variability of ethane on Jupiter

NASA Technical Reports Server (NTRS)

Kostiuk, Theodor; Espenak, Fred; Mumma, Michael J.; Deming, Drake; Zipoy, David

1987-01-01

Varying stratospheric temperature profiles and C2H6 altitude distributions furnish contexts for the evaluation of ethane abundances and distributions in the Jupiter stratosphere. Substantial ethane line emission and retrieved mole fraction variability is noted near the footprint of Io's flux tube, as well as within the auroral regions. It is suggested that this and other observed phenomena are due to the modification of local stratospheric chemistry by higher-order effects, which are in turn speculated to be due to the precipitation of charged particles along magnetic field lines.
Multi-species hybrid modeling of plasma interactions at Io and Europa

NASA Astrophysics Data System (ADS)

Sebek, O.; Travnicek, P. M.; Walker, R. J.; Hellinger, P.

2017-12-01

We study the plasma interactions of Galilean satellites, Io and Europa, by means of multi-species global hybrid simulations. For both satellites we consider multi-species background plasma composed of oxygen and sulphur ions and multi-component neutral atmospheres. We consider ionization processes of the neutral atmosphere which is then a source of dense population of pick-up ions. We apply variable background plasma conditions (density, temperature, magnetic field magnitude and orientation) in order to cover the variability in conditions experienced by the satellites when located in different regions of the Jovian plasma torus. We examine global structure of the interactions, formation of Alfvén wings, development of temperature anisotropies and corresponding instabilities, and the fine phenomena caused by the multi-specie nature of the plasma. The results are in good agreement with in situ measurements of magnetic field and plasma density made by the Galileo spacecraft.

Global climatology and variability of potential new production estimated from remote sensing of sea-surface temperature

NASA Technical Reports Server (NTRS)

Dugdale, Richard C.; Wilkerson, Frances P.

1995-01-01

During this project we have collected numerous shipboard data-bases of oceanic nitrate and silicate versus temperature for both equatorial and coastal upwelling regions. These cruises all have accompanying N-15 measurements of new production. The inverse relationships between nutrients and temperatures have been determined and are being used to obtain surface nutrient fields from sea surface temperatures measured remotely by satellite borne sensors- i.e. AVHRR data from NOAA satellites contained in the MCSST data set for the world ocean provided by the University of Miami. The images and data derived from space in this way show the strong seasonal fluctuations and interannual el Nino fluctuations of the nitrate field. the nitrate data has been used to make estimates of new production for the equatorial pacific which are compared with shipboard measurements when available. The importance of silicate as a nutrient driving new production and the ratio of nitrate to silicate has been discovered to be crucial to better understand the causes of new production variability, so we have added these parameters to our study and have begun to make estimates of these for the equatorial Pacific, derived from the weekly averaged sea surface temperatures (SSTs).
Relationship between the fungal complex causing Fusarium head blight of wheat and environmental conditions.

PubMed

Xu, X-M; Nicholson, P; Thomsett, M A; Simpson, D; Cooke, B M; Doohan, F M; Brennan, J; Monaghan, S; Moretti, A; Mule, G; Hornok, L; Beki, E; Tatnell, J; Ritieni, A; Edwards, S G

2008-01-01

ABSTRACT Over 4 years, the environmental conditions and the causal agents of Fusarium head blight (FHB) disease of wheat were determined in field sites in four European countries: Hungary, Ireland, Italy, and the United Kingdom. Polymerase chain reaction-based methods were used to detect each species causing FHB and quantify its DNA (as a measurement of fungal abundance) in the samples. Canonical correspondence analysis (CCA) was used to determine the relationship of the incidence and abundance of each species with weather variables. CCA indicated that little variability in the species prevalence data was explained by the weather variables. In contrast, a greater proportion of variability in abundance data was accounted for by the weather variables. Most samples contained two or more species and statistical analysis suggested that these species tended to coexist at field sites. CCA also indicated that there were differences in the relationships of the prevalence and abundance of the six FHB species with environmental variables. Fusarium poae was associated with relatively drier and warmer conditions, whereas F. graminearum was associated with warmer/humid conditions. F. avenaceum and F. culmorum were both associated with niches of cooler/wet/humid conditions. Two Microdochium species were associated with regions of relatively cool/moderate temperatures and frequent rainfalls of short duration. The results also suggested that environmental conditions differentially affect the infection and colonization processes, and the comparative abundance of the six species.
Identify the dominant variables to predict stream water temperature

NASA Astrophysics Data System (ADS)

Chien, H.; Flagler, J.

2016-12-01

Stream water temperature is a critical variable controlling water quality and the health of aquatic ecosystems. Accurate prediction of water temperature and the assessment of the impacts of environmental variables on water temperature variation are critical for water resources management, particularly in the context of water quality and aquatic ecosystem sustainability. The objective of this study is to measure stream water temperature and air temperature and to examine the importance of streamflow on stream water temperature prediction. The measured stream water temperature and air temperature will be used to test two hypotheses: 1) streamflow is a relatively more important factor than air temperature in regulating water temperature, and 2) by combining air temperature and streamflow data stream water temperature can be more accurately estimated. Water and air temperature data loggers are placed at two USGS stream gauge stations #01362357and #01362370, located in the upper Esopus Creek watershed in Phonecia, NY. The ARIMA (autoregressive integrated moving average) time series model is used to analyze the measured water temperature data, identify the dominant environmental variables, and predict the water temperature with identified dominant variable. The preliminary results show that streamflow is not a significant variable in predicting stream water temperature at both USGS gauge stations. Daily mean air temperature is sufficient to predict stream water temperature at this site scale.
Electronic Absorption and MCD Spectra for Pd(AuPPh(3))(8)(2+), Pt(AuPPh(3))(8)(2+), and Related Platinum-Centered Gold Cluster Complexes.

PubMed

Adrowski, Michael J.; Mason, W. Roy

1997-03-26

Electronic absorption and 7.0 T magnetic circular dichroism (MCD) spectra in the UV-vis region, 1.6 to approximately 4.0 &mgr;m(-)(1) (1 &mgr;m(-)(1) = 10(4) cm(-)(1)) are reported for [Pd(AuPPh(3))(8)](NO(3))(2) and [Pt(AuPPh(3))(8)](NO(3))(2) in acetonitrile solutions at room temperature. The MCD spectra are better resolved than the absorption spectra and consist of both A and B terms. The spectra are interpreted in terms of D(4)(d)() skeletal geometry and MO's that are approximated by 5s and 6s orbitals for Pd and Pt/Au atoms, respectively. The lowest energy excited configurations and states are attributed to intraframework (IF) Au(8)(2+) transitions. Evidence is also presented for Pt 5d --> Au 6s transitions in the MCD spectra for Pt(AuPPh(3))(8)(2+). Acetonitrile solution absorption and MCD spectra for the related Pt-centered cluster complexes [Pt(CO)(AuPPh(3))(8)](NO(3))(2), [Pt(AuP(p-tolyl)(3))(8)](NO(3))(2), [Pt(CuCl)(AuPPh(3))(8)](NO(3))(2), [Pt(AgNO(3))(AuPPh(3))(8)](NO(3))(2), [Pt(Hg)(2)(AuPPh(3))(8)](NO(3))(2), [Pt(HgCl)(2)(AuPPh(3))(8)](BF(4))(2), and [Pt(HgNO(3))(2)(AuPPh(3))(8)](BF(4))(2) are also reported and interpreted within the context of the model developed for the M(AuPPh(3))(8)(2+) complexes.
Forced convective heat transfer in boundary layer flow of Sisko fluid over a nonlinear stretching sheet.

PubMed

Munir, Asif; Shahzad, Azeem; Khan, Masood

2014-01-01

The major focus of this article is to analyze the forced convective heat transfer in a steady boundary layer flow of Sisko fluid over a nonlinear stretching sheet. Two cases are studied, namely (i) the sheet with variable temperature (PST case) and (ii) the sheet with variable heat flux (PHF case). The heat transfer aspects are investigated for both integer and non-integer values of the power-law index. The governing partial differential equations are reduced to a system of nonlinear ordinary differential equations using appropriate similarity variables and solved numerically. The numerical results are obtained by the shooting method using adaptive Runge Kutta method with Broyden's method in the domain[Formula: see text]. The numerical results for the temperature field are found to be strongly dependent upon the power-law index, stretching parameter, wall temperature parameter, material parameter of the Sisko fluid and Prandtl number. In addition, the local Nusselt number versus wall temperature parameter is also graphed and tabulated for different values of pertaining parameters. Further, numerical results are validated by comparison with exact solutions as well as previously published results in the literature.
Upper-Level Mediterranean Oscillation index and seasonal variability of rainfall and temperature

NASA Astrophysics Data System (ADS)

Redolat, Dario; Monjo, Robert; Lopez-Bustins, Joan A.; Martin-Vide, Javier

2018-02-01

The need for early seasonal forecasts stimulates continuous research in climate teleconnections. The large variability of the Mediterranean climate presents a greater difficulty in predicting climate anomalies. This article reviews teleconnection indices commonly used for the Mediterranean basin and explores possible extensions of one of them, the Mediterranean Oscillation index (MOi). In particular, the anomalies of the geopotential height field at 500 hPa are analyzed using segmentation of the Mediterranean basin in seven spatial windows: three at eastern and four at western. That is, different versions of an Upper-Level Mediterranean Oscillation index (ULMOi) were calculated, and monthly and annual variability of precipitation and temperature were analyzed for 53 observatories from 1951 to 2015. Best versions were selected according to the Pearson correlation, its related p value, and two measures of standardized error. The combination of the Balearic Sea and Libya/Egypt windows was the best for precipitation and temperature, respectively. The ULMOi showed the highest predictive ability in combination with the Atlantic Multidecadal Oscillation index (AMOi) for the annual temperature throughout the Mediterranean basin. The best model built from the indices presented a final mean error between 15 and 25% in annual precipitation for most of the studied area.
Non-Darcy flow of water-based carbon nanotubes with nonlinear radiation and heat generation/absorption

NASA Astrophysics Data System (ADS)

Hayat, T.; Ullah, Siraj; Khan, M. Ijaz; Alsaedi, A.; Zaigham Zia, Q. M.

2018-03-01

Here modeling and computations are presented to introduce the novel concept of Darcy-Forchheimer three-dimensional flow of water-based carbon nanotubes with nonlinear thermal radiation and heat generation/absorption. Bidirectional stretching surface induces the flow. Darcy's law is commonly replace by Forchheimer relation. Xue model is implemented for nonliquid transport mechanism. Nonlinear formulation based upon conservation laws of mass, momentum and energy is first modeled and then solved by optimal homotopy analysis technique. Optimal estimations of auxiliary variables are obtained. Importance of influential variables on the velocity and thermal fields is interpreted graphically. Moreover velocity and temperature gradients are discussed and analyzed. Physical interpretation of influential variables is examined.
Seeing is believing I: The use of thermal sensing from satellite imagery to predict crop yield

NASA Astrophysics Data System (ADS)

B, Potgieter A.; D, Rodriguez; B, Power; J, Mclean; P, Davis

2014-02-01

Volatility in crop production has been part of the Australian environment since cropping began with the arrival of the first European settlers. Climate variability is the main factor affecting crop production at national, state and local scales. At field level spatial patterns on yield production are also determined by spatially changing soil properties in interaction with seasonal climate conditions and weather patterns at critical stages in the crop development. Here we used a combination of field level weather records, canopy characteristics, and satellite information to determine the spatial performance of a large field of wheat. The main objective of this research is to determine the ability of remote sensing technologies to capture yield losses due to water stress at the canopy level. The yield, canopy characteristics (i.e. canopy temperature and ground cover) and seasonal conditions of a field of wheat (~1400ha) (-29.402° South and 149.508°, New South Wales, Australia) were continuously monitored during the winter of 2011. Weather and crop variables were continuously monitored by installing three automatic weather stations in a transect covering different positions and soils in the landscape. Weather variables included rainfall, minimum and maximum temperatures and relative humidity, and crop characteristics included ground cover and canopy temperature. Satellite imagery Landsat TM 5 and 7 was collected at five different stages in the crop cycle. Weather variables and crop characteristics were used to calculate a crop stress index (CSI) at point and field scale (39 fields). Field data was used to validate a spatial satellite image derived index. Spatial yield data was downloaded from the harvester at the different locations in the field. We used the thermal band (land surface temperature, LST) and enhanced vegetation index (EVI) bands from the MODIS (250 m for visible bands and 1km for thermal band) and a derived EVI from Landsat TM 7 (25 m for visible and 90m for thermal) satellite platforms. Results showed that spatial variations in crop yield were related to a satellite derived canopy stress index (CSIsat) and a moisture stress index (MSIsat). A weather station level canopy stress index (CSIws) calculated at midday was correlated to the CSIsat at late morning. In addition, a strong linear relationship was observed between EVI and LST at point scale throughout the crop growth period. Differences were smallest at anthesis when the canopy closure was highest. This suggests that LST imagery data around flowering could be used to calculate crop stress over large areas of the crop. The harvested yield was related (R2 = 0.67) to CSIsat using a fix date across all fields. This relationship improved (R2 = 0.92) using both indices from all five dates across all fields during the crop growth period. Here we successfully showed that satellite derived crop attributes (CSIsat and MSIsat) can account for most of the variability in final crop yield and that they can be used to predict crop yield at field scales. Applications of these results could enhance the ability of producers to hedge their financial on -farm crop production losses due to in-season water stress by taking crop insurance. This is likely to further improve their adaptive capacity and thus strengthening the long-term viability of the industry domestically and elsewhere.
Implementing of lognormal humidity and cloud-related control variables for the NCEP GSI hybrid EnVAR Assimilation scheme.

NASA Astrophysics Data System (ADS)

Fletcher, S. J.; Kleist, D.; Ide, K.

2017-12-01

As the resolution of operational global numerical weather prediction system approach the meso-scale, then the assumption of Gaussianity for the errors at these scales may not valid. However, it is also true that synoptic variables that are positive definite in behavior, for example humidity, cannot be optimally analyzed with a Gaussian error structure, where the increment could force the full field to go negative. In this presentation we present the initial work of implementing a mixed Gaussian-lognormal approximation for the temperature and moisture variable in both the ensemble and variational component of the NCEP GSI hybrid EnVAR. We shall also lay the foundation for the implementation of the lognormal approximation to cloud related control variables to allow for a possible more consistent assimilation of cloudy radiances.
Nonlinear Gravitational and Radiation Aspects in Nanoliquid with Exponential Space Dependent Heat Source and Variable Viscosity

NASA Astrophysics Data System (ADS)

Gireesha, B. J.; Kumar, P. B. Sampath; Mahanthesh, B.; Shehzad, S. A.; Abbasi, F. M.

2018-05-01

The nonlinear convective flow of kerosene-Alumina nanoliquid subjected to an exponential space dependent heat source and temperature dependent viscosity is investigated here. This study is focuses on augmentation of heat transport rate in liquid propellant rocket engine. The kerosene-Alumina nanoliquid is considered as the regenerative coolant. Aspects of radiation and viscous dissipation are also covered. Relevant nonlinear system is solved numerically via RK based shooting scheme. Diverse flow fields are computed and examined for distinct governing variables. We figured out that the nanoliquid's temperature increased due to space dependent heat source and radiation aspects. The heat transfer rate is higher in case of changeable viscosity than constant viscosity.
Nonlinear Gravitational and Radiation Aspects in Nanoliquid with Exponential Space Dependent Heat Source and Variable Viscosity

NASA Astrophysics Data System (ADS)

Gireesha, B. J.; Kumar, P. B. Sampath; Mahanthesh, B.; Shehzad, S. A.; Abbasi, F. M.

2018-02-01

The nonlinear convective flow of kerosene-Alumina nanoliquid subjected to an exponential space dependent heat source and temperature dependent viscosity is investigated here. This study is focuses on augmentation of heat transport rate in liquid propellant rocket engine. The kerosene-Alumina nanoliquid is considered as the regenerative coolant. Aspects of radiation and viscous dissipation are also covered. Relevant nonlinear system is solved numerically via RK based shooting scheme. Diverse flow fields are computed and examined for distinct governing variables. We figured out that the nanoliquid's temperature increased due to space dependent heat source and radiation aspects. The heat transfer rate is higher in case of changeable viscosity than constant viscosity.
TRUMP; transient and steady state temperature distribution. [IBM360,370; CDC7600; FORTRAN IV (95%) and BAL (5%) (IBM); FORTRAN IV (CDC)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Elrod, D.C.; Turner, W.D.

TRUMP solves a general nonlinear parabolic partial differential equation describing flow in various kinds of potential fields, such as fields of temperature, pressure, or electricity and magnetism; simultaneously, it will solve two additional equations representing, in thermal problems, heat production by decomposition of two reactants having rate constants with a general Arrhenius temperature dependence. Steady-state and transient flow in one, two, or three dimensions are considered in geometrical configurations having simple or complex shapes and structures. Problem parameters may vary with spatial position, time, or primary dependent variables--temperature, pressure, or field strength. Initial conditions may vary with spatial position, andmore » among the criteria that may be specified for ending a problem are upper and lower limits on the size of the primary dependent variable, upper limits on the problem time or on the number of time-steps or on the computer time, and attainment of steady state.IBM360,370;CDC7600; FORTRAN IV (95%) and BAL (5%) (IBM); FORTRAN IV (CDC); OS/360 (IBM360), OS/370 (IBM370), SCOPE 2.1.5 (CDC7600); As dimensioned, the program requires 400K bytes of storage on an IBM370 and 145,100 (octal) words on a CDC7600.« less
An Intercomparison of Lidar Ozone and Temperature Measurements From the SOLVE Mission With Predicted Model Values

NASA Technical Reports Server (NTRS)

Burris, John; McGee, Thomas J.; Hoegy, Walt; Lait, Leslie; Sumnicht, Grant; Twigg, Larry; Heaps, William

2000-01-01

Temperature profiles acquired by Goddard Space Flight Center's AROTEL lidar during the SOLVE mission onboard NASA's DC-8 are compared with predicted values from several atmospheric models (DAO, NCEP and UKMO). The variability in the differences between measured and calculated temperature fields was approximately 5 K. Retrieved temperatures within the polar vortex showed large regions that were significantly colder than predicted by the atmospheric models.
Reducing endoplasmic reticulum stress does not improve steatohepatitis in mice fed a methionine- and choline-deficient diet.

PubMed

Henkel, Anne S; Dewey, Amanda M; Anderson, Kristy A; Olivares, Shantel; Green, Richard M

2012-07-01

Endoplasmic reticulum (ER) stress has been implicated in the pathogenesis of nonalcoholic steatohepatitis. The ER stress response is activated in the livers of mice fed a methionine- and choline-deficient (MCD) diet, yet the role of ER stress in the pathogenesis of MCD diet-induced steatohepatitis is unknown. Using chemical chaperones on hepatic steatosis and markers of inflammation and fibrosis in mice fed a MCD diet, we aim to determine the effects of reducing ER stress. C57BL/6J mice were fed a MCD diet with or without the ER chemical chaperones 4-phenylbutyric acid (PBA) and tauroursodeoxycholic acid (TUDCA) for 2 wk. TUDCA and PBA effectively attenuated the ER stress response in MCD diet-fed mice, as evidenced by reduced protein levels of phosphorylated eukaryotic initiation factor 2α and phosphorylated JNK and suppression of mRNA levels of CCAAT/enhancer binding protein homologous protein, glucose-regulated protein 78 kDa, and X-box binding protein 1. However, PBA and TUDCA did not decrease MCD diet-induced hepatic steatosis. MCD diet-induced hepatic inflammation, as evidenced by increased plasma alanine aminotransferase and induction of hepatic TNFα expression, was also not reduced by PBA or TUDCA. PBA and TUDCA did not attenuate MCD diet-induced upregulation of the fibrosis-associated genes tissue inhibitor of metalloproteinase-1 and matrix metalloproteinase-9. ER chemical chaperones reduce MCD diet-induced ER stress, yet they do not improve MCD diet-induced hepatic steatosis, inflammation, or activation of genes associated with fibrosis. These data suggest that although the ER stress response is activated by the MCD diet, it does not have a primary role in the pathogenesis of MCD diet-induced steatohepatitis.
Comparing historical and modern methods of Sea Surface Temperature measurement - Part 1: Review of methods, field comparisons and dataset adjustments

NASA Astrophysics Data System (ADS)

Matthews, J. B. R.

2012-09-01

Sea Surface Temperature (SST) measurements have been obtained from a variety of different platforms, instruments and depths over the post-industrial period. Today most measurements come from ships, moored and drifting buoys and satellites. Shipboard methods include temperature measurement of seawater sampled by bucket and in engine cooling water intakes. Engine intake temperatures are generally thought to average a few tenths of a °C warmer than simultaneous bucket temperatures. Here I review SST measurement methods, studies comparing shipboard methods by field experiment and adjustments applied to SST datasets to account for variable methods. In opposition to contemporary thinking, I find average bucket-intake temperature differences reported from field studies inconclusive. Non-zero average differences often have associated standard deviations that are several times larger than the averages themselves. Further, average differences have been found to vary widely between ships and between cruises on the same ship. The cause of non-zero average differences is typically unclear given the general absence of additional temperature observations to those from buckets and engine intakes. Shipboard measurements appear of variable quality, highly dependent upon the accuracy and precision of the thermometer used and the care of the observer where manually read. Methods are generally poorly documented, with written instructions not necessarily reflecting actual practices of merchant mariners. Measurements cannot be expected to be of high quality where obtained by untrained sailors using thermometers of low accuracy and precision.
Unstable Resonator Mid-Infrared Laser Sources

DTIC Science & Technology

2016-02-26

of individual materials depending on metal species and growth temperatures . Fig. 8 (a) Average power consumption and (b) delay of C2MOS and double...feedback lasers, chirped gratings, interferometric lithography, nanowire transistors, tunnel field- effect transistors, nanoscale epitaxial growth, nanowire...technical approaches. Approaches to wavelength tuning include thermal/operation temperature tuning [1], variable cavity length with cantilever/piezo
Daily estimates of the migrating tide and zonal mean temperature in the mesosphere and lower thermosphere derived from SABER data

NASA Astrophysics Data System (ADS)

Ortland, David A.

2017-04-01

Satellites provide a global view of the structure in the fields that they measure. In the mesosphere and lower thermosphere, the dominant features in these fields at low zonal wave number are contained in the zonal mean, quasi-stationary planetary waves, and tide components. Due to the nature of the satellite sampling pattern, stationary, diurnal, and semidiurnal components are aliased and spectral methods are typically unable to separate the aliased waves over short time periods. This paper presents a data processing scheme that is able to recover the daily structure of these waves and the zonal mean state. The method is validated by using simulated data constructed from a mechanistic model, and then applied to Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) temperature measurements. The migrating diurnal tide extracted from SABER temperatures for 2009 has a seasonal variability with peak amplitude (20 K at 95 km) in February and March and minimum amplitude (less than 5 K at 95 km) in early June and early December. Higher frequency variability includes a change in vertical structure and amplitude during the major stratospheric warming in January. The migrating semidiurnal tide extracted from SABER has variability on a monthly time scale during January through March, minimum amplitude in April, and largest steady amplitudes from May through September. Modeling experiments were performed that show that much of the variability on seasonal time scales in the migrating tides is due to changes in the mean flow structure and the superposition of the tidal responses to water vapor heating in the troposphere and ozone heating in the stratosphere and lower mesosphere.
Tree Density and Species Decline in the African Sahel Attributable to Climate

NASA Technical Reports Server (NTRS)

Gonzalez, Patrick; Tucker, Compton J.; Sy, H.

2012-01-01

Increased aridity and human population have reduced tree cover in parts of the African Sahel and degraded resources for local people. Yet, tree cover trends and the relative importance of climate and population remain unresolved. From field measurements, aerial photos, and Ikonos satellite images, we detected significant 1954-2002 tree density declines in the western Sahel of 18 +/- 14% (P = 0.014, n = 204) and 17 +/- 13% (P = 0.0009, n = 187). From field observations, we detected a significant 1960-2000 species richness decline of 21 +/- 11% (P = 0.0028, n = 14) across the Sahel and a southward shift of the Sahel, Sudan, and Guinea zones. Multivariate analyses of climate, soil, and population showed that temperature most significantly (P < 0.001) explained tree cover changes. Multivariate and bivariate tests and field observations indicated the dominance of temperature and precipitation, supporting attribution of tree cover changes to climate variability. Climate change forcing of Sahel climate variability, particularly the significant (P < 0.05) 1901-2002 temperature increases and precipitation decreases in the research areas, connects Sahel tree cover changes to global climate change. This suggests roles for global action and local adaptation to address ecological change in the Sahel.
Impact of Entomophaga maimaiga (Entomophthorales: Entomophthoraceae) on outbreak gypsy moth populations (Lepidoptera: Erebidae): the role of weather.

PubMed

Reilly, James R; Hajek, Ann E; Liebhold, Andrew M; Plymale, Ruth

2014-06-01

The fungal pathogen Entomophaga maimaiga Humber, Shimazu, and Soper is prevalent in gypsy moth [Lymantria dispar (L.)] populations throughout North America. To understand how weather-related variables influence gypsy moth-E. maimaiga interactions in the field, we measured fungal infection rates at 12 sites in central Pennsylvania over 3 yr, concurrently measuring rainfall, soil moisture, humidity, and temperature. Fungal mortality was assessed using both field-collected larvae and laboratory-reared larvae caged on the forest floor. We found significant positive effects of moisture-related variables (rainfall, soil moisture, and relative humidity) on mortality due to fungal infection in both data sets, and significant negative effects of temperature on the mortality of field-collected larvae. Lack of a clear temperature relationship with the mortality of caged larvae may be attributable to differential initiation of infection by resting spores and conidia or to microclimate effects. These relationships may be helpful in understanding how gypsy moth dynamics vary across space and time, and in forecasting how the gypsy moth and fungus will interact as they move into warmer or drier areas, or new weather conditions occur due to climate change.
The Effect of Alongcoast Advection on Pacific Northwest Shelf and Slope Water Properties in Relation to Upwelling Variability

NASA Astrophysics Data System (ADS)

Stone, Hally B.; Banas, Neil S.; MacCready, Parker

2018-01-01

The Northern California Current System experiences highly variable seasonal upwelling in addition to larger basin-scale variability, both of which can significantly affect its water chemistry. Salinity and temperature fields from a 7 year ROMS hindcast model of this region (43°N-50°N), along with extensive particle tracking, were used to study interannual variability in water properties over both the upper slope and the midshelf bottom. Variation in slope water properties was an order of magnitude smaller than on the shelf. Furthermore, the primary relationship between temperature and salinity anomalies in midshelf bottom water consisted of variation in density (cold/salty versus warm/fresh), nearly orthogonal to the anomalies along density levels (cold/fresh versus warm/salty) observed on the upper slope. These midshelf anomalies were well-explained (R2 = 0.6) by the combination of interannual variability in local and remote alongshore wind stress, and depth of the California Undercurrent (CUC) core. Lagrangian analysis of upper slope and midshelf bottom water shows that both are affected simultaneously by large-scale alongcoast advection of water through the northern and southern boundaries. The amplitude of anomalies in bottom oxygen and dissolved inorganic carbon (DIC) on the shelf associated with upwelling variability are larger than those associated with typical variation in alongcoast advection, and are comparable to observed anomalies in this region. However, a large northern intrusion event in 2004 illustrates that particular, large-scale alongcoast advection anomalies can be just as effective as upwelling variability in changing shelf water properties on the interannual scale.

The Effect of Alongcoast Advection on Pacific Northwest Shelf and Slope Water Properties in Relation to Upwelling Variability

PubMed Central

Banas, Neil S.; MacCready, Parker

2018-01-01

Abstract The Northern California Current System experiences highly variable seasonal upwelling in addition to larger basin‐scale variability, both of which can significantly affect its water chemistry. Salinity and temperature fields from a 7 year ROMS hindcast model of this region (43°N–50°N), along with extensive particle tracking, were used to study interannual variability in water properties over both the upper slope and the midshelf bottom. Variation in slope water properties was an order of magnitude smaller than on the shelf. Furthermore, the primary relationship between temperature and salinity anomalies in midshelf bottom water consisted of variation in density (cold/salty versus warm/fresh), nearly orthogonal to the anomalies along density levels (cold/fresh versus warm/salty) observed on the upper slope. These midshelf anomalies were well‐explained (R 2 = 0.6) by the combination of interannual variability in local and remote alongshore wind stress, and depth of the California Undercurrent (CUC) core. Lagrangian analysis of upper slope and midshelf bottom water shows that both are affected simultaneously by large‐scale alongcoast advection of water through the northern and southern boundaries. The amplitude of anomalies in bottom oxygen and dissolved inorganic carbon (DIC) on the shelf associated with upwelling variability are larger than those associated with typical variation in alongcoast advection, and are comparable to observed anomalies in this region. However, a large northern intrusion event in 2004 illustrates that particular, large‐scale alongcoast advection anomalies can be just as effective as upwelling variability in changing shelf water properties on the interannual scale. PMID:29938149
Suppressed magnetic circular dichroism and valley-polarized magnetoabsorption due to the mass anisotopy in Bi

NASA Astrophysics Data System (ADS)

Kuzmenko, Alexey B.

We measure broadband far-infrared magneto-optical conductivity spectra of pure bismuth separately for left- and right-handed circular polarizations in magnetic fields up to 7 T that allows us to obtain the magnetic circular dichroism (MCD). Thanks to a high spectral resolution we distinguish the Landau level (LL) transitions in the Dirac-like electron and the parabolic hole bands. The hole transitions exhibit a full (100%) MCD as is indeed expected for a circular cyclotron orbit. However, the MCD for electron-pocket transitions is reduced to only 13 +/-1%. This strong suppression can be attributed to the huge effective-mass anisotropy ( 200) in the electron pockets and can be generally interpreted as a signature of the mismatch between the spatial metric experienced by the photons and the electrons. An important consequence of this observation is that the magneto-absorption in bismuth is highly valley sensitive, which paves the way to future valleytronic applications in materials with a strong effective-mass anisotropy.
Assessment of the Suitability of High Resolution Numerical Weather Model Outputs for Hydrological Modelling in Mountainous Cold Regions

NASA Astrophysics Data System (ADS)

Rasouli, K.; Pomeroy, J. W.; Hayashi, M.; Fang, X.; Gutmann, E. D.; Li, Y.

2017-12-01

The hydrology of mountainous cold regions has a large spatial variability that is driven both by climate variability and near-surface process variability associated with complex terrain and patterns of vegetation, soils, and hydrogeology. There is a need to downscale large-scale atmospheric circulations towards the fine scales that cold regions hydrological processes operate at to assess their spatial variability in complex terrain and quantify uncertainties by comparison to field observations. In this research, three high resolution numerical weather prediction models, namely, the Intermediate Complexity Atmosphere Research (ICAR), Weather Research and Forecasting (WRF), and Global Environmental Multiscale (GEM) models are used to represent spatial and temporal patterns of atmospheric conditions appropriate for hydrological modelling. An area covering high mountains and foothills of the Canadian Rockies was selected to assess and compare high resolution ICAR (1 km × 1 km), WRF (4 km × 4 km), and GEM (2.5 km × 2.5 km) model outputs with station-based meteorological measurements. ICAR with very low computational cost was run with different initial and boundary conditions and with finer spatial resolution, which allowed an assessment of modelling uncertainty and scaling that was difficult with WRF. Results show that ICAR, when compared with WRF and GEM, performs very well in precipitation and air temperature modelling in the Canadian Rockies, while all three models show a fair performance in simulating wind and humidity fields. Representation of local-scale atmospheric dynamics leading to realistic fields of temperature and precipitation by ICAR, WRF, and GEM makes these models suitable for high resolution cold regions hydrological predictions in complex terrain, which is a key factor in estimating water security in western Canada.
Electrical Switching of Perovskite Thin-Film Resistors

NASA Technical Reports Server (NTRS)

Liu, Shangqing; Wu, Juan; Ignatiev, Alex

2010-01-01

Electronic devices that exploit electrical switching of physical properties of thin films of perovskite materials (especially colossal magnetoresistive materials) have been invented. Unlike some related prior devices, these devices function at room temperature and do not depend on externally applied magnetic fields. Devices of this type can be designed to function as sensors (exhibiting varying electrical resistance in response to varying temperature, magnetic field, electric field, and/or mechanical pressure) and as elements of electronic memories. The underlying principle is that the application of one or more short electrical pulse(s) can induce a reversible, irreversible, or partly reversible change in the electrical, thermal, mechanical, and magnetic properties of a thin perovskite film. The energy in the pulse must be large enough to induce the desired change but not so large as to destroy the film. Depending on the requirements of a specific application, the pulse(s) can have any of a large variety of waveforms (e.g., square, triangular, or sine) and be of positive, negative, or alternating polarity. In some applications, it could be necessary to use multiple pulses to induce successive incremental physical changes. In one class of applications, electrical pulses of suitable shapes, sizes, and polarities are applied to vary the detection sensitivities of sensors. Another class of applications arises in electronic circuits in which certain resistance values are required to be variable: Incorporating the affected resistors into devices of the present type makes it possible to control their resistances electrically over wide ranges, and the lifetimes of electrically variable resistors exceed those of conventional mechanically variable resistors. Another and potentially the most important class of applications is that of resistance-based nonvolatile-memory devices, such as a resistance random access memory (RRAM) described in the immediately following article, Electrically Variable Resistive Memory Devices (MFS-32511-1).
Global conditions in the solar corona from 2010 to 2017

PubMed Central

Morgan, Huw; Taroyan, Youra

2017-01-01

Through reduction of a huge data set spanning 2010–2017, we compare mean global changes in temperature, emission measure (EM), and underlying photospheric magnetic field of the solar corona over most of the last activity cycle. The quiet coronal mean temperature rises from 1.4 to 1.8 MK, whereas EM increases by almost a factor of 50% from solar minimum to maximum. An increased high-temperature component near 3 MK at solar maximum drives the increase in quiet coronal mean temperature, whereas the bulk of the plasma remains near 1.6 MK throughout the cycle. The mean, spatially smoothed magnitude of the quiet Sun magnetic field rises from 1.6 G in 2011 to peak at 2.0 G in 2015. Active region conditions are highly variable, but their mean remains approximately constant over the cycle, although there is a consistent decrease in active region high-temperature emission (near 3 MK) between the peak of solar maximum and present. Active region mean temperature, EM, and magnetic field magnitude are highly correlated. Correlation between sunspot/active region area and quiet coronal conditions shows the important influence of decaying sunspots in driving global changes, although we find no appreciable delay between changes in active region area and quiet Sun magnetic field strength. The hot coronal contribution to extreme ultraviolet (EUV) irradiance is dominated by the quiet corona throughout most of the cycle, whereas the high variability is driven by active regions. Solar EUV irradiance cannot be predicted accurately by sunspot index alone, highlighting the need for continued measurements. PMID:28740861
KSHV-associated multicentric Castleman disease: A tangle of different entities requiring multitarget treatment strategies.

PubMed

Carbone, Antonino; De Paoli, Paolo; Gloghini, Annunziata; Vaccher, Emanuela

2015-07-15

Multicentric Castleman Disease (MCD) is a lymphoproliferative disorder presenting with heterogeneous pathological and clinical features. It comprises disease entities with a complex aetiology and overlapping pathogenesis. MCD can be found in association with HIV infection, plasma-cell dyscrasias, Kaposi sarcoma (KS), B-cell lymphomas including primary effusion lymphoma (PEL) and its solid variant, and Hodgkin lymphoma. In KSHV-associated MCD cases, a common association is KS and a specific variant of lymphoma referred to as "plasmablastic lymphoma," also called "large B-cell lymphoma arising in KSHV-associated MCD" lacking EBV infection. MCD is often referred to as human interleukin-6 (hIL-6) syndrome, since an overproduction of IL-6 occurs in MCD-associated diseases as well as in MCD itself. hIL-6 and a viral IL-6 (vIL-6) homolog encoded by KSHV can independently or together lead to flares of KSHV-associated MCD. Recently, a new clinical entity was proposed to describe a severe systemic infection/reactivation of KSHV: KSHV inflammatory syndrome (KICS). KICS may contribute in inducing the inflammatory symptoms seen in some patients with severe KS or PEL. The precise relationship of KICS to KSHV-associated MCD is unclear and it is possible that KICS may be prodromal symptoms to frank KSHV-associated MCD. Options for treatment of KSHV-associated MCD and related diseases include monoclonal antibodies, chemotherapy, immune modulators, virus-activated cytotoxic therapy and antiviral therapies. A comprehensive understanding of the intricacies of the HIV-KSHV coinfection will probably lead to additional advances in therapy and managements for these disorders. © 2014 UICC.
Low Tumor Infiltrating Mast Cell Density Confers Prognostic Benefit and Reflects Immunoactivation in Colorectal Cancer.

PubMed

Mao, Yihao; Feng, Qingyang; Zheng, Peng; Yang, Liangliang; Zhu, Dexiang; Chang, Wenju; Ji, Meiling; He, Guodong; Xu, Jianmin

2018-06-06

The role of mast cells (MCs) in colorectal cancer (CRC) progression was controversial. Thus, this study was designed to evaluate the prognostic value of MCs as well as their correlation with immune microenvironment. A retrospective cohort of CRC patients of stage I-IV was enrolled in this study. 854 consecutive patients were divided into training set (427 patients) and validation set (427 patients) randomly. The findings were further validated in a GEO cohort, GSE39582 (556 patients). The mast cell density (MCD) was measured by immunohistochemical staining of tryptase or by CIBERSORT algorithm. Low MCD predicted prolonged overall survival (OS) in training and validation set. Moreover, MCD was identified as an independent prognostic indicator in both sets. Better stratification for CRC prognosis can be achieved by building a MCD based nomogram. The prognostic role of MCD was further validated in GSE39582. In addition, MCD predicted improved survival in stage II and III CRC patients receiving adjuvant chemotherapy (ACT). Multiple immune pathways were enriched in low MCD group while cytokines/chemokines promoting anti-tumor immunity were highly expressed in such group. Furthermore, MCD was negatively correlated with CD8+ T cells infiltration. In conclusion, MCD was identified as an independent prognostic factor, as well as a potential biomarker for ACT benefit in stage II and III CRC. Better stratification of CRC prognosis could be achieved by building a MCD based nomogram. Moreover, immunoactivation in low MCD tumors may contributed to improved prognosis. This article is protected by copyright. All rights reserved. © 2018 UICC.
Model for multishot all-thermal all-optical switching in ferromagnets

NASA Astrophysics Data System (ADS)

Gorchon, J.; Yang, Y.; Bokor, J.

2016-07-01

All-optical magnetic switching (AOS) is a recently observed rich and puzzling phenomenon that offers promising technological applications. However, a fundamental understanding of the underlying mechanisms remains elusive. Here we present a model for multishot helicity-dependent AOS in ferromagnetic materials based on a purely heat-driven mechanism in the presence of magnetic circular dichroism (MCD). We predict that AOS should be possible with as little as 0.5% of MCD, after a minimum number of laser shots heat the sample close to the Curie temperature. Finally, we qualitatively reproduce the all-optically switched domain patterns observed experimentally by numerically simulating the result of multiple laser shots on an FePtC granular ferromagnetic film.
Temperature and field-dependent transport measurements in continuously tunable tantalum oxide memristors expose the dominant state variable

NASA Astrophysics Data System (ADS)

Graves, Catherine E.; Dávila, Noraica; Merced-Grafals, Emmanuelle J.; Lam, Si-Ty; Strachan, John Paul; Williams, R. Stanley

2017-03-01

Applications of memristor devices are quickly moving beyond computer memory to areas of analog and neuromorphic computation. These applications require the design of devices with different characteristics from binary memory, such as a large tunable range of conductance. A complete understanding of the conduction mechanisms and their corresponding state variable(s) is crucial for optimizing performance and designs in these applications. Here we present measurements of low bias I-V characteristics of 6 states in a Ta/ tantalum-oxide (TaOx)/Pt memristor spanning over 2 orders of magnitude in conductance and temperatures from 100 K to 500 K. Our measurements show that the 300 K device conduction is dominated by a temperature-insensitive current that varies with non-volatile memristor state, with an additional leakage contribution from a thermally-activated current channel that is nearly independent of the memristor state. We interpret these results with a parallel conduction model of Mott hopping and Schottky emission channels, fitting the voltage and temperature dependent experimental data for all memristor states with only two free parameters. The memristor conductance is linearly correlated with N, the density of electrons near EF participating in the Mott hopping conduction, revealing N to be the dominant state variable for low bias conduction in this system. Finally, we show that the Mott hopping sites can be ascribed to oxygen vacancies, where the local oxygen vacancy density responsible for critical hopping pathways controls the memristor conductance.
Downscaling reanalysis data to high-resolution variables above a glacier surface (Cordillera Blanca, Peru)

NASA Astrophysics Data System (ADS)

Hofer, Marlis; Mölg, Thomas; Marzeion, Ben; Kaser, Georg

2010-05-01

Recently initiated observation networks in the Cordillera Blanca provide temporally high-resolution, yet short-term atmospheric data. The aim of this study is to extend the existing time series into the past. We present an empirical-statistical downscaling (ESD) model that links 6-hourly NCEP/NCAR reanalysis data to the local target variables, measured at the tropical glacier Artesonraju (Northern Cordillera Blanca). The approach is particular in the context of ESD for two reasons. First, the observational time series for model calibration are short (only about two years). Second, unlike most ESD studies in climate research, we focus on variables at a high temporal resolution (i.e., six-hourly values). Our target variables are two important drivers in the surface energy balance of tropical glaciers; air temperature and specific humidity. The selection of predictor fields from the reanalysis data is based on regression analyses and climatologic considerations. The ESD modelling procedure includes combined empirical orthogonal function and multiple regression analyses. Principal component screening is based on cross-validation using the Akaike Information Criterion as model selection criterion. Double cross-validation is applied for model evaluation. Potential autocorrelation in the time series is considered by defining the block length in the resampling procedure. Apart from the selection of predictor fields, the modelling procedure is automated and does not include subjective choices. We assess the ESD model sensitivity to the predictor choice by using both single- and mixed-field predictors of the variables air temperature (1000 hPa), specific humidity (1000 hPa), and zonal wind speed (500 hPa). The chosen downscaling domain ranges from 80 to 50 degrees west and from 0 to 20 degrees south. Statistical transfer functions are derived individually for different months and times of day (month/hour-models). The forecast skill of the month/hour-models largely depends on month and time of day, ranging from 0 to 0.8, but the mixed-field predictors generally perform better than the single-field predictors. At all time scales, the ESD model shows added value against two simple reference models; (i) the direct use of reanalysis grid point values, and (ii) mean diurnal and seasonal cycles over the calibration period. The ESD model forecast 1960 to 2008 clearly reflects interannual variability related to the El Niño/Southern Oscillation, but is sensitive to the chosen predictor type. So far, we have not assessed the performance of NCEP/NCAR reanalysis data against other reanalysis products. The developed ESD model is computationally cheap and applicable wherever measurements are available for model calibration.
Understanding of variability properties in very low mass stars and brown dwarfs

NASA Astrophysics Data System (ADS)

Mondal, Soumen; Ghosh, Samrat; Khata, Dhrimadri; Joshi, Santosh; Das, Ramkrishna

2018-04-01

We report on photometric variability studies of a L3.5 brown dwarf 2MASS J00361617+1821104 (2M0036+18) in the field and of four young brown dwarfs in the star-forming region IC 348. From muti-epoch observations, we found significant periodic variability in 2M0036+18 with a period of 2.66 ± 0.55 hours on one occasion while it seemed to be non-variable on three other occasions. An evolving dust cloud might cause such a scenario. Among four young brown dwarfs of IC 348 in the spectral range M7.25 - M8, one brown dwarf 2MASS J03443921+3208138 shows significant variability. The K-band spectra (2.0-2.4 μm) of nine very low mass stars (M1 - M9 V) are used to characterize the water band index (H20-K2). We found that it is strongly correlated with the surface temperature of M dwarfs.
Holo-analysis.

PubMed

Rosen, G D

2006-06-01

Meta-analysis is a vague descriptor used to encompass very diverse methods of data collection analysis, ranging from simple averages to more complex statistical methods. Holo-analysis is a fully comprehensive statistical analysis of all available data and all available variables in a specified topic, with results expressed in a holistic factual empirical model. The objectives and applications of holo-analysis include software production for prediction of responses with confidence limits, translation of research conditions to praxis (field) circumstances, exposure of key missing variables, discovery of theoretically unpredictable variables and interactions, and planning future research. Holo-analyses are cited as examples of the effects on broiler feed intake and live weight gain of exogenous phytases, which account for 70% of variation in responses in terms of 20 highly significant chronological, dietary, environmental, genetic, managemental, and nutrient variables. Even better future accountancy of variation will be facilitated if and when authors of papers routinely provide key data for currently neglected variables, such as temperatures, complete feed formulations, and mortalities.
Heat tracer test in an alluvial aquifer: Field experiment and inverse modelling

NASA Astrophysics Data System (ADS)

Klepikova, Maria; Wildemeersch, Samuel; Hermans, Thomas; Jamin, Pierre; Orban, Philippe; Nguyen, Frédéric; Brouyère, Serge; Dassargues, Alain

2016-09-01

Using heat as an active tracer for aquifer characterization is a topic of increasing interest. In this study, we investigate the potential of using heat tracer tests for characterization of a shallow alluvial aquifer. A thermal tracer test was conducted in the alluvial aquifer of the Meuse River, Belgium. The tracing experiment consisted in simultaneously injecting heated water and a dye tracer in an injection well and monitoring the evolution of groundwater temperature and tracer concentration in the pumping well and in measurement intervals. To get insights in the 3D characteristics of the heat transport mechanisms, temperature data from a large number of observation wells closely spaced along three transects were used. Temperature breakthrough curves in observation wells are contrasted with what would be expected in an ideal layered aquifer. They reveal strongly unequal lateral and vertical components of the transport mechanisms. The observed complex behavior of the heat plume is explained by the groundwater flow gradient on the site and heterogeneities in the hydraulic conductivity field. Moreover, due to high injection temperatures during the field experiment a temperature-induced fluid density effect on heat transport occurred. By using a flow and heat transport numerical model with variable density coupled with a pilot point approach for inversion of the hydraulic conductivity field, the main preferential flow paths were delineated. The successful application of a field heat tracer test at this site suggests that heat tracer tests is a promising approach to image hydraulic conductivity field. This methodology could be applied in aquifer thermal energy storage (ATES) projects for assessing future efficiency that is strongly linked to the hydraulic conductivity variability in the considered aquifer.
Calibration and temperature correction of heat dissipation matric potential sensors

USGS Publications Warehouse

Flint, A.L.; Campbell, G.S.; Ellett, K.M.; Calissendorff, C.

2002-01-01

This paper describes how heat dissipation sensors, used to measure soil water matric potential, were analyzed to develop a normalized calibration equation and a temperature correction method. Inference of soil matric potential depends on a correlation between the variable thermal conductance of the sensor's porous ceramic and matric poten-tial. Although this correlation varies among sensors, we demonstrate a normalizing procedure that produces a single calibration relationship. Using sensors from three sources and different calibration methods, the normalized calibration resulted in a mean absolute error of 23% over a matric potential range of -0.01 to -35 MPa. Because the thermal conductivity of variably saturated porous media is temperature dependent, a temperature correction is required for application of heat dissipation sensors in field soils. A temperature correction procedure is outlined that reduces temperature dependent errors by 10 times, which reduces the matric potential measurement errors by more than 30%. The temperature dependence is well described by a thermal conductivity model that allows for the correction of measurements at any temperature to measurements at the calibration temperature.
Temperature-dependent daily variability of precipitable water in special sensor microwave/imager observations

NASA Technical Reports Server (NTRS)

Gutowski, William J.; Lindemulder, Elizabeth A.; Jovaag, Kari

1995-01-01

We use retrievals of atmospheric precipitable water from satellite microwave observations and analyses of near-surface temperature to examine the relationship between these two fields on daily and longer time scales. The retrieval technique producing the data used here is most effective over the open ocean, so the analysis focuses on the southern hemisphere's extratropics, which have an extensive ocean surface. For both the total and the eddy precipitable water fields, there is a close correspondence between local variations in the precipitable water and near-surface temperature. The correspondence appears particularly strong for synoptic and planetary scale transient eddies. More specifically, the results support a typical modeling assumption that transient eddy moisture fields are proportional to transient eddy temperature fields under the assumption f constant relative humidity.
Appraisal of Environmental Influence on Radon Variability in 10 m deep Borehole at Ghuttu, Northwest Himalaya, India

NASA Astrophysics Data System (ADS)

Arora, B.. R.; Choubey, V. M.; Barbosa, S. M.

2009-04-01

Wadia Institute of Himalayan Geology (WIHG) has recently established the first Indian Multi-Parametric Geophysical Observatory (MPGO) at Ghuttu (30.53 N, 78.74 E) in Garhwal Himalayas (Uttarakhand), India to study the earthquake precursors in integrated manner. Given the rationale and significance of this inter-disciplinary approach, the paper with the help of recorded radon time series shall illustrate the complex time variability that needs to be quantified in terms of influencing environmental factors before residual field can be used to search anticipated earthquake precursory signals. Monitoring of 222radon (Rn) is carried out using a gamma ray radon monitoring probe based on 1.5" x 1.5" NaI scintillation. Measurement of radon concentration at 15 min interval has been done at 10m depth in air column above the variable water level in a 68m deep borehole together with simultaneous recordings of ground water level and environmental variables such as atmospheric pressure, temperature, rain fall etc. Apart from strong seasonal cycle in Rn concentration, with high values in summer (July to September) and low values in the winter months (January to March), the most obvious feature in the time series is the distinct nature of daily variation pattern. Four types of daily variations observed are a) positive peaks, b) negative peaks and c) sinusoidal peaks and d) long intervals when daily variations are conspicuously absent, particularly in winter and rainy season. Examination and correlation with environmental factors has revealed that when surface atmospheric temperature is well below the water temperature in borehole (later is constant around 19oC in all seasons) temperature gradients are not conducive to set up the convection currents for the emanation of radon to surface, thus explaining the absence of daily variation in radon concentration in winter. During the rainy season, following continuous rainfalls, once the soil/rocks are saturated with water radon concentrations show fair stability. Long pauses in rainfall give jerky variability during rainy season with no clear pattern of daily variation. During rest of the seasons when surface temperature are always higher that water temperature, the nature of observed pattern can be reconciled in terms of the form and amplitude of daily progression in temperature gradient. An accurate description of the effect of environmental variables is essential if we to wish decipher information related to stress/strain accumulation.
Multivariate non-normally distributed random variables in climate research - introduction to the copula approach

NASA Astrophysics Data System (ADS)

Schölzel, C.; Friederichs, P.

2008-10-01

Probability distributions of multivariate random variables are generally more complex compared to their univariate counterparts which is due to a possible nonlinear dependence between the random variables. One approach to this problem is the use of copulas, which have become popular over recent years, especially in fields like econometrics, finance, risk management, or insurance. Since this newly emerging field includes various practices, a controversial discussion, and vast field of literature, it is difficult to get an overview. The aim of this paper is therefore to provide an brief overview of copulas for application in meteorology and climate research. We examine the advantages and disadvantages compared to alternative approaches like e.g. mixture models, summarize the current problem of goodness-of-fit (GOF) tests for copulas, and discuss the connection with multivariate extremes. An application to station data shows the simplicity and the capabilities as well as the limitations of this approach. Observations of daily precipitation and temperature are fitted to a bivariate model and demonstrate, that copulas are valuable complement to the commonly used methods.
Transplant production

USDA-ARS?s Scientific Manuscript database

For field pepper (Capsicum spp.) production, plants can be established from direct seed or transplants depending on the location and cultural practices for the specific pepper type grown. Direct seeding can result in slow, variable, and reduced plant stands due to variations in soil temperature, wat...
Intrinsic transmission magnetic circular dichroism spectra of GaMnAs

NASA Astrophysics Data System (ADS)

Terada, Hiroshi; Ohya, Shinobu; Tanaka, Masaaki

2018-03-01

Transmission magnetic circular dichroism (MCD) spectroscopy has been widely used to reveal the spin-dependent band structure of ferromagnetic semiconductors. In these previous studies, some band pictures have been proposed from the spectral shapes observed in transmission MCD; however, extrinsic signals originating from optical interference have not been appropriately considered. In this study, we calculate the MCD spectra taking into account the optical interference of the layered structure of samples and show that the spectral shape of MCD is strongly influenced by optical interference. To correctly understand the transmission MCD, we also calculate the intrinsic MCD spectra of GaMnAs that are not influenced by the optical interference. The spectral shape of the intrinsic MCD can be explained by the characteristic band structure of GaMnAs, that is, the spin-polarized valence band and the impurity band existing above the valence band top.
The contribution of carotid rete variability to brain temperature variability in sheep in a thermoneutral environment.

PubMed

Maloney, Shane K; Mitchell, Duncan; Blache, Dominique

2007-03-01

The degree of variability in the temperature difference between the brain and carotid arterial blood is greater than expected from the presumed tight coupling between brain heat production and brain blood flow. In animals with a carotid rete, some of that variability arises in the rete. Using thermometric data loggers in five sheep, we have measured the temperature of arterial blood before it enters the carotid rete and after it has perfused the carotid rete, as well as hypothalamic temperature, every 2 min for between 6 and 12 days. The sheep were conscious, unrestrained, and maintained at an ambient temperature of 20-22 degrees C. On average, carotid arterial blood and brain temperatures were the same, with a decrease in blood temperature of 0.35 degrees C across the rete and then an increase in temperature of the same magnitude between blood leaving the rete and the brain. Rete cooling of arterial blood took place at temperatures below the threshold for selective brain cooling. All of the variability in the temperature difference between carotid artery and brain was attributable statistically to variability in the temperature difference across the rete. The temperature difference between arterial blood leaving the rete and the brain varied from -0.1 to 0.9 degrees C. Some of this variability was related to a thermal inertia of the brain, but the majority we attribute to instability in the relationship between brain blood flow and brain heat production.

Time Scales and Sources of European Temperature Variability

NASA Astrophysics Data System (ADS)

Årthun, Marius; Kolstad, Erik W.; Eldevik, Tor; Keenlyside, Noel S.

2018-04-01

Skillful predictions of continental climate would be of great practical benefit for society and stakeholders. It nevertheless remains fundamentally unresolved to what extent climate is predictable, for what features, at what time scales, and by which mechanisms. Here we identify the dominant time scales and sources of European surface air temperature (SAT) variability during the cold season using a coupled climate reanalysis, and a statistical method that estimates SAT variability due to atmospheric circulation anomalies. We find that eastern Europe is dominated by subdecadal SAT variability associated with the North Atlantic Oscillation, whereas interdecadal and multidecadal SAT variability over northern and southern Europe are thermodynamically driven by ocean temperature anomalies. Our results provide evidence that temperature anomalies in the North Atlantic Ocean are advected over land by the mean westerly winds and, hence, provide a mechanism through which ocean temperature controls the variability and provides predictability of European SAT.
[Bioacoustic of the advertisement call of Ceratophrys cranwelli (Anura: Ceratophryidae)].

PubMed

Valetti, Julián Alonso; Salas, Nancy Edith; Martino, Adolfo Ludovico

2013-03-01

The advertisement call plays an important role in the life history of anuran amphibians, mainly during the breeding season. Call features represent an important character to discriminate species, and sound emissions are very effective to assure or reinforce genetic incompatibility, especially in the case of sibling species. Since frogs are ectotherms, acoustic properties of their calls will vary with temperature. In this study, we described the advertisement call of C. cranwelli, quantifying the temperature effect on its components. The acoustic emissions were recorded during 2007 using a DAT record Sony TCD-100 with stereo microphone ECM-MS907 Sony and tape TDK DAT-RGX 60. As males emit their calls floating in temporary ponds, water temperatures were registered after recording the advertisement calls with a digital thermometer TES 1300+/-0.1 degreeC. Altogether, 54 calls from 18 males were analyzed. The temporal variables of each advertisement call were measured using oscillograms and sonograms and the analyses of dominant frequency were performed using a spectrogram. Multiple correlation analysis was used to identify the temperature-dependent acoustic variables and the temperature effect on these variables was quantified using linear regression models. The advertisement call of C. cranwelli consists of a single pulse group. Call duration, Pulse duration and Pulse interval decreased with the temperature, whereas the Pulse rate increased with temperature. The temperature-dependent variables were standardized at 25 degreeC according to the linear regression model obtained. The acoustic variables that were correlated with the temperature are the variables which emissions depend on laryngeal muscles and the temperature constraints the contractile properties of muscles. Our results indicated that temperature explains an important fraction of the variability in some acoustic variables (79% in the Pulse rate), and demonstrated the importance of considering the effect of temperature in acoustic components. The results suggest that acoustic variables show geographic variation to compare data with previous works.
The Oceanic Contribution to Atlantic Multi-Decadal Variability

NASA Astrophysics Data System (ADS)

Wills, R. C.; Armour, K.; Battisti, D. S.; Hartmann, D. L.

2017-12-01

Atlantic multi-decadal variability (AMV) is typically associated with variability in ocean heat transport (OHT) by the Atlantic Meridional Overturning Circulation (AMOC). However, recent work has cast doubt on this connection by showing that slab-ocean climate models, in which OHT cannot vary, exhibit similar variability. Here, we apply low-frequency component analysis to isolate the variability of Atlantic sea-surface temperatures (SSTs) that occurs on decadal and longer time scales. In observations and in pre-industrial control simulations of comprehensive climate models, we find that AMV is confined to the extratropics, with the strongest temperature anomalies in the North Atlantic subpolar gyre. We show that warm subpolar temperatures are associated with a strengthened AMOC, increased poleward OHT, and local heat fluxes from the ocean into the atmosphere. In contrast, the traditional index of AMV based on the basin-averaged SST anomaly shows warm temperatures preceded by heat fluxes from the atmosphere into the ocean, consistent with the atmosphere driving this variability, and shows a weak relationship with AMOC. The autocorrelation time of the basin-averaged SST index is 1 year compared to an autocorrelation time of 5 years for the variability of subpolar temperatures. This shows that multi-decadal variability of Atlantic SSTs is sustained by OHT variability associated with AMOC, while atmosphere-driven SST variability, such as exists in slab-ocean models, contributes primarily on interannual time scales.
Polyunsaturated fat in the methionine-choline-deficient diet influences hepatic inflammation but not hepatocellular injury.

PubMed

Lee, Gene S; Yan, Jim S; Ng, Raymond K; Kakar, Sanjay; Maher, Jacquelyn J

2007-08-01

Methionine-choline-deficient (MCD) diets that cause steatohepatitis in rodents are typically enriched in polyunsaturated fat. To determine whether the fat composition of the MCD formula influences the development of liver disease, we manufactured custom MCD formulas with fats ranging in PUFA content from 2% to 59% and tested them for their ability to induce steatohepatitis. All modified-fat MCD formulas caused identical degrees of hepatic steatosis and resulted in a similar distribution of fat within individual hepatic lipid compartments. The fatty acid composition of hepatic lipids, however, reflected the fat composition of the diet. Mice fed a PUFA-rich MCD formula showed extensive hepatic lipid peroxidation, induction of proinflammatory genes, and histologic inflammation. When PUFAs were substituted with more saturated fats, lipid peroxidation, proinflammatory gene induction, and hepatic inflammation all declined significantly. Despite the close relationship between PUFAs and hepatic inflammation in mice fed MCD formulas, dietary fat had no impact on MCD-mediated damage to hepatocytes. Indeed, histologic apoptosis and serum alanine aminotransferase levels were comparable in all MCD-fed mice regardless of dietary fat content. Together, these results indicate that dietary PUFAs promote hepatic inflammation but not hepatotoxicity in the MCD model of liver disease. These findings emphasize that individual dietary nutrients can make specific contributions to steatohepatitis.
The early development of medial coronoid disease in growing Labrador retrievers: radiographic, computed tomographic, necropsy and micro-computed tomographic findings.

PubMed

Lau, S F; Wolschrijn, C F; Hazewinkel, H A W; Siebelt, M; Voorhout, G

2013-09-01

Medial coronoid disease (MCD) encompasses lesions of the entire medial coronoid process (MCP), both of the articular cartilage and the subchondral bone. To detect the earliest signs of MCD, radiography and computed tomography were used to monitor the development of MCD in 14 Labrador retrievers, from 6 to 7 weeks of age until euthanasia. The definitive diagnosis of MCD was based on necropsy and micro-computed tomography findings. The frequency of MCD in the dogs studied was 50%. Radiographic findings did not provide evidence of MCD, ulnar subtrochlear sclerosis or blunting of the cranial edge of the MCP. Computed tomography was more sensitive (30.8%) than radiography (0%) in detecting early MCD, with the earliest signs detectable at 14 weeks of age. A combination of the necropsy and micro-computed tomography findings of the MCP showed that MCD was manifested as a lesion of only the subchondral bone in dogs <18 weeks of age. In all dogs (affected and unaffected), there was close contact between the base of the MCP and the proximal radial head in the congruent joints. Computed tomography and micro-computed tomography findings indicated that the lesions of MCD probably originated at the base of the MCP. Copyright © 2013 Elsevier Ltd. All rights reserved.
The effect of canal fill on paediatric femur fractures treated with titanium elastic nails.

PubMed

Nielsen, E; Bonsu, N; Andras, L M; Goldstein, R Y

2018-02-01

Traditional teaching for fixation of paediatric femur fractures recommends 80% nail diameter/medullary canal diameter ratio (ND/MCD) for successful maintenance of reduction. Prior studies have investigated this with stainless steel Enders nails. Our aim was to assess the impact of ND/MCD on maintenance of reduction and malunion rates in paediatric femur fractures treated with flexible intramedullary nails (FINs). Retrospective data was collected on all paediatric patients treated with FINs for diaphyseal femur fractures at a single tertiary care institution over a ten-year period. Patients with co-morbidities affecting bone quality were excluded. Patients were subdivided into groups based on ND/MCD. A total of 66 patients met inclusion criteria. Mean ND/MCD was 76.3% (32.9% to 98.8%, SD 14.3). In all, 50% (n = 33/66) of patients had > 80% ND/MCD, and only 13.6% (n = 9/66) of patients had less than 60% ND/MCD. When controlling for fracture stability, ND/MCD had no correlation with mean shortening (p = 0.07) There was no correlation between ND/MCD and angulation in the sagittal (p = 0.96) or coronal plane (p = 0.20). Three patients fit malunion criteria. ND/MCD for these patients were 40%, 67% and 79%. There was no correlation between ND/MCD and shortening or malangulation. The majority of patients in this series with less than 80% fill with FIN healed within acceptable parameters. III.
[Ala12]MCD peptide: a lead peptide to inhibitors of immunoglobulin E binding to mast cell receptors.

PubMed

Buku, A; Condie, B A; Price, J A; Mezei, M

2005-09-01

An effort was made to discover mast cell degranulating (MCD) peptide analogs that bind with high affinity to mast cell receptors without triggering secretion of histamine or other mediators of the allergic reaction initiated by immunoglobulin E (IgE) after mast cell activation. Such compounds could serve as inhibitors of IgE binding to mast cell receptors. An alanine scan of MCD peptide reported previously showed that the analog [Ala12]MCD was 120-fold less potent in histamine-releasing activity and fivefold more potent in binding affinity to mast cell receptors than the parent MCD peptide. Because this analog showed marginal intrinsic activity and good binding affinity it was subsequently tested in the present study as an IgE inhibitor. In contrast to MCD peptide, [Ala12]MCD showed a 50% inhibition of IgE binding to the Fc epsilon RI alpha mast cell receptor by using rat basophilic leukemia (RBL-2H3) mast cells and fluorescence polarization. Furthermore, in a beta-hexosaminidase secretory assay, the peptide also showed a 50% inhibition of the secretion of this enzyme caused by IgE. An attempt was made to relate structural changes and biologic differences between the [Ala12]MCD analog and the parent MCD peptide. The present results show that [Ala12]MCD may provide a base for designing agents to prevent IgE/Fc epsilon RI alpha interactions and, consequently, allergic conditions.
A spontaneous tRNA suppressor of a mutation in the Chlamydomonas reinhardtii nuclear MCD1 gene required for stability of the chloroplast petD mRNA

PubMed Central

Murakami, Shinya; Kuehnle, Katrin; Stern, David B.

2005-01-01

Numerous nuclear gene products are required for the correct expression of organellar genes. One such gene in the green alga Chlamydomonas reinhardtii is MCD1, whose product is required for stability of the chloroplast-encoded petD mRNA. In mcd1 mutants, which are non-photosynthetic, petD mRNA is degraded by a 5′–3′ exonuclease activity, resulting in a failure to synthesize its product, subunit IV of the cytochrome b 6/f complex. Here, we report the sequence of the wild-type MCD1 gene, which encodes a large and novel putative protein. Analysis of three mutant alleles showed that two harbored large deletions, but that one allele, mcd1-2, had a single base change resulting in a nonsense codon near the N-terminus. This same mutant allele can be suppressed by a second-site mutation in the nuclear MCD2 gene, whereas mcd2-1 cannot suppress the deletion in mcd1-1 (Esposito,D. Higgs,D.C. Drager,R.G. Stern, D.B. and Girard-Bascou,J. (2001) Curr. Genet., 39, 40–48). We report the cloning of mcd2-1, and show that the mutation lies in a tRNASer(CGA), which has been modified to translate the nonsense codon in mcd1-2. We discuss how the existence of a large tRNASer gene family may permit this suppression without pleiotropic consequences. PMID:15947135
On the Origins of the Intercorrelations Between Solar Wind Variables

NASA Astrophysics Data System (ADS)

Borovsky, Joseph E.

2018-01-01

It is well known that the time variations of the diverse solar wind variables at 1 AU (e.g., solar wind speed, density, proton temperature, electron temperature, magnetic field strength, specific entropy, heavy-ion charge-state densities, and electron strahl intensity) are highly intercorrelated with each other. In correlation studies of the driving of the Earth's magnetosphere-ionosphere-thermosphere system by the solar wind, these solar wind intercorrelations make determining cause and effect very difficult. In this report analyses of solar wind spacecraft measurements and compressible-fluid computer simulations are used to study the origins of the solar wind intercorrelations. Two causes are found: (1) synchronized changes in the values of the solar wind variables as the plasma types of the solar wind are switched by solar rotation and (2) dynamic interactions (compressions and rarefactions) in the solar wind between the Sun and the Earth. These findings provide an incremental increase in the understanding of how the Sun-Earth system operates.
Global map of solar power production efficiency, considering micro climate factors

NASA Astrophysics Data System (ADS)

Hassanpour Adeh, E.; Higgins, C. W.

2017-12-01

Natural resources degradation and greenhouse gas emissions are creating a global crisis. Renewable energy is the most reliable option to mitigate this environmental dilemma. Abundancy of solar energy makes it highly attractive source of electricity. The existing global spatial maps of available solar energy are created with various models which consider the irradiation, latitude, cloud cover, elevation, shading and aerosols, and neglect the influence of local meteorological conditions. In this research, the influences of microclimatological variables on solar energy productivity were investigated with an in-field study at the Rabbit Hills solar arrays near Oregon State University. The local studies were extended to a global level, where global maps of solar power were produced, taking the micro climate variables into account. These variables included: temperature, relative humidity, wind speed, wind direction, solar radiation. The energy balance approach was used to synthesize the data and compute the efficiencies. The results confirmed that the solar power efficiency can be directly affected by the air temperature and wind speed.
Effect of Temperature on Heart Rate Variability in Neonatal ICU Patients With Hypoxic-Ischemic Encephalopathy.

PubMed

Massaro, An N; Campbell, Heather E; Metzler, Marina; Al-Shargabi, Tareq; Wang, Yunfei; du Plessis, Adre; Govindan, Rathinaswamy B

2017-04-01

To determine whether measures of heart rate variability are related to changes in temperature during rewarming after therapeutic hypothermia for hypoxic-ischemic encephalopathy. Prospective observational study. Level 4 neonatal ICU in a free-standing academic children's hospital. Forty-four infants with moderate to severe hypoxic-ischemic encephalopathy treated with therapeutic hypothermia. Continuous electrocardiogram data from 2 hours prior to rewarming through 2 hours after completion of rewarming (up to 10 hr) were analyzed. Median beat-to-beat interval and measures of heart rate variability were quantified including beat-to-beat interval SD, low and high frequency relative spectral power, detrended fluctuation analysis short and long α exponents (αS and αL), and root mean square short and long time scales. The relationships between heart rate variability measures and esophageal/axillary temperatures were evaluated. Heart rate variability measures low frequency, αS, and root mean square short and long time scales were negatively associated, whereas αL was positively associated, with temperature (p < 0.01). These findings signify an overall decrease in heart rate variability as temperature increased toward normothermia. Measures of heart rate variability are temperature dependent in the range of therapeutic hypothermia to normothermia. Core body temperature needs to be considered when evaluating heart rate variability metrics as potential physiologic biomarkers of illness severity in hypoxic-ischemic encephalopathy infants undergoing therapeutic hypothermia.
Seasonal and interannual variability of atmospheric heat sources and moisture sinks as determined from NCEP/NCAR ranalysis. Part I

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yanai, Michio; Tomita, Tomohiko

1997-11-01

In this paper, an analysis of the heat and moisture budgets of the troposphere is revised and extended. The analysis is based on the National Centers for Environmental Prediction (NCEP) and National Center for Atmospheric Research (NCAR) reanalysis from 1980 to 1994. The seasonal and interannual variability of heat sources and sinks and the nature of heating over various geographical locations is examined in detail. Results presented include global distributions of the 15-year mean of the vertically integrated heat source and moisture sink and the outgoing longwave radiation flux for northern winter and northern summer. A time series of monthlymore » mean anomalies of the apparent heat source, the apparent moisture sink, outgoing longwave radiation, sea surface temperature, and divergence at wind fields of 850 hPa and 200 hPa are presented for the equatorial Indian Ocean, the equatorial eastern Pacific Ocean, western Tibet, and eastern Tibet. In the equatorial Indian Ocean, short period oscillation is superimposed upon longer periods. Over the eastern Pacific, a longer periodicity is dominant and the variability of the heat source is very well correlated with similar variations of outgoing longwave radiation, sea surface temperature, and horizontal divergence. The high correlation with these variables suggests that anomalous heating is accompanied by intensified convective activity favored by warmer sea surface temperature. 13 refs., 5 figs.« less
Amplification and dampening of soil respiration by changes in temperature variability

USGS Publications Warehouse

Sierra, C.A.; Harmon, M.E.; Thomann, E.; Perakis, S.S.; Loescher, H.W.

2011-01-01

Accelerated release of carbon from soils is one of the most important feed backs related to anthropogenically induced climate change. Studies addressing the mechanisms for soil carbon release through organic matter decomposition have focused on the effect of changes in the average temperature, with little attention to changes in temperature vari-ability. Anthropogenic activities are likely to modify both the average state and the variability of the climatic system; therefore, the effects of future warming on decomposition should not only focus on trends in the average temperature, but also variability expressed as a change of the probability distribution of temperature.Using analytical and numerical analyses we tested common relationships between temperature and respiration and found that the variability of temperature plays an important role determining respiration rates of soil organic matter. Changes in temperature variability, without changes in the average temperature, can affect the amount of carbon released through respiration over the long term. Furthermore, simultaneous changes in the average and variance of temperature can either amplify or dampen there release of carbon through soil respiration as climate regimes change. The effects depend on the degree of convexity of the relationship between temperature and respiration and the magnitude of the change in temperature variance. A potential consequence of this effect of variability would be higher respiration in regions where both the mean and variance of temperature are expected to increase, such as in some low latitude regions; and lower amounts of respiration where the average temperature is expected to increase and the variance to decrease, such as in northern high latitudes.
Clinical Manifestations of Kaposi Sarcoma Herpesvirus Lytic Activation: Multicentric Castleman Disease (KSHV–MCD) and the KSHV Inflammatory Cytokine Syndrome

PubMed Central

Polizzotto, Mark N.; Uldrick, Thomas S.; Hu, Duosha; Yarchoan, Robert

2012-01-01

Soon after the discovery of Kaposi sarcoma (KS)-associated herpesvirus (KSHV), it was appreciated that this virus was associated with most cases of multicentric Castleman disease (MCD) arising in patients infected with human immunodeficiency virus. It has subsequently been recognized that KSHV–MCD is a distinct entity from other forms of MCD. Like MCD that is unrelated to KSHV, the clinical presentation of KSHV–MCD is dominated by systemic inflammatory symptoms including fevers, cachexia, and laboratory abnormalities including cytopenias, hypoalbuminemia, hyponatremia, and elevated C-reactive protein. Pathologically KSHV–MCD is characterized by polyclonal, IgM-lambda restricted plasmacytoid cells in the intrafollicular areas of affected lymph nodes. A portion of these cells are infected with KSHV and a sizable subset of these cells express KSHV lytic genes including a viral homolog of interleukin-6 (vIL-6). Patients with KSHV–MCD generally have elevated KSHV viral loads in their peripheral blood. Production of vIL-6 and induction of human (h) IL-6 both contribute to symptoms, perhaps in combination with overproduction of IL-10 and other cytokines. Until recently, the prognosis of patients with KSHV–MCD was poor. Recent therapeutic advances targeting KSHV-infected B cells with the anti-CD20 monoclonal antibody rituximab and utilizing KSHV enzymes to target KSHV-infected cells have substantially improved patient outcomes. Recently another KSHV-associated condition, the KSHV inflammatory cytokine syndrome (KICS) has been described. Its clinical manifestations resemble those of KSHV–MCD but lymphadenopathy is not prominent and the pathologic nodal changes of KSHV–MCD are absent. Patients with KICS exhibit elevated KSHV viral loads and elevation of vIL-6, homolog of human interleukin-6 and IL-10 comparable to those seen in KSHV–MCD; the cellular origin of these is a matter of investigation. KICS may contribute to the inflammatory symptoms seen in some patients with severe KS or primary effusion lymphoma. Additional research is needed to better define the clinical spectrum of KICS and its relationship to KSHV–MCD. In additional, research is needed to better understand the pathogenesis and epidemiology of both KICS and KSHV–MCD, as well as the optimal therapy for both of these disorders. PMID:22403576
Clinical Manifestations of Kaposi Sarcoma Herpesvirus Lytic Activation: Multicentric Castleman Disease (KSHV-MCD) and the KSHV Inflammatory Cytokine Syndrome.

PubMed

Polizzotto, Mark N; Uldrick, Thomas S; Hu, Duosha; Yarchoan, Robert

2012-01-01

Soon after the discovery of Kaposi sarcoma (KS)-associated herpesvirus (KSHV), it was appreciated that this virus was associated with most cases of multicentric Castleman disease (MCD) arising in patients infected with human immunodeficiency virus. It has subsequently been recognized that KSHV-MCD is a distinct entity from other forms of MCD. Like MCD that is unrelated to KSHV, the clinical presentation of KSHV-MCD is dominated by systemic inflammatory symptoms including fevers, cachexia, and laboratory abnormalities including cytopenias, hypoalbuminemia, hyponatremia, and elevated C-reactive protein. Pathologically KSHV-MCD is characterized by polyclonal, IgM-lambda restricted plasmacytoid cells in the intrafollicular areas of affected lymph nodes. A portion of these cells are infected with KSHV and a sizable subset of these cells express KSHV lytic genes including a viral homolog of interleukin-6 (vIL-6). Patients with KSHV-MCD generally have elevated KSHV viral loads in their peripheral blood. Production of vIL-6 and induction of human (h) IL-6 both contribute to symptoms, perhaps in combination with overproduction of IL-10 and other cytokines. Until recently, the prognosis of patients with KSHV-MCD was poor. Recent therapeutic advances targeting KSHV-infected B cells with the anti-CD20 monoclonal antibody rituximab and utilizing KSHV enzymes to target KSHV-infected cells have substantially improved patient outcomes. Recently another KSHV-associated condition, the KSHV inflammatory cytokine syndrome (KICS) has been described. Its clinical manifestations resemble those of KSHV-MCD but lymphadenopathy is not prominent and the pathologic nodal changes of KSHV-MCD are absent. Patients with KICS exhibit elevated KSHV viral loads and elevation of vIL-6, homolog of human interleukin-6 and IL-10 comparable to those seen in KSHV-MCD; the cellular origin of these is a matter of investigation. KICS may contribute to the inflammatory symptoms seen in some patients with severe KS or primary effusion lymphoma. Additional research is needed to better define the clinical spectrum of KICS and its relationship to KSHV-MCD. In additional, research is needed to better understand the pathogenesis and epidemiology of both KICS and KSHV-MCD, as well as the optimal therapy for both of these disorders.
High-resolution mapping and modelling of surface albedo in Norwegian boreal forests: from remotely sensed data to predictions

NASA Astrophysics Data System (ADS)

Cherubini, Francesco; Hu, Xiangping; Vezhapparambu, Sajith; Stromman, Anders

2017-04-01

Surface albedo, a key parameter of the Earth's climate system, has high variability in space, time, and land cover and its parameterization is among the most important variables in climate models. The lack of extensive estimates for model improvement is one of the main limitations for accurately quantifying the influence of surface albedo changes on the planetary radiation balance. We use multi-year satellite retrievals of MODIS surface albedo (MCD43A3), high resolution land cover maps, and meteorological records to characterize albedo variations in Norway across latitude, seasons, land cover type, and topography. We then use this dataset to elaborate semi-empirical models to predict albedo values as a function of tree species, age, volume and climate variables like temperature and snow water equivalents (SWE). Given the complexity of the dataset and model formulation, we apply an innovative non-linear programming approach simultaneously coupled with linear un-mixing. The MODIS albedo products are at a resolution of about 500 m and 8 days. The land cover maps provide vegetation structure information on relative abundance of tree species, age, and biomass volumes at 16 m resolution (for both deciduous and coniferous species). Daily observations of meteorological information on air temperature and SWE are produced at 1 km resolution from interpolation of meteorological weather stations in Norway. These datasets have different resolution and projection, and are harmonized by identifying, for each MODIS pixel, the intersecting land cover polygons and the percentage area of the MODIS pixel represented by each land cover type. We then filter the subplots according to the following criteria: i) at least 96% of the total pixel area is covered by a single land cover class (either forest or cropland); ii) if forest area, at least 98% of the forest area is covered by spruce, deciduous or pine. Forested pixels are then categorized as spruce, deciduous, or pine dominant if the fraction of the respective tree species is greater than 75%. Results show averages of albedo estimates for forests and cropland depicting spatial (along a latitudinal gradient) and temporal (daily, monthly, and seasonal) variations across Norway. As the case study region is a country with heterogeneous topography, we also study the sensitivity of the albedo estimates to the slope and aspect of the terrain. The mathematical programming approach uses a variety of functional forms, constraints and variables, leading to many different model outputs. There are several models with relatively high performances, allowing for a flexibility in the model selection, with different model variants suitable for different situations. This approach produces albedo predictions at the same resolution of the land cover dataset (16 m, notably higher than the MODIS estimates), can incorporate changes in climate conditions, and is robust to cross-validation between different locations. By integrating satellite measurements and high-resolution vegetation maps, we can thus produce semi-empirical models that can predict albedo values for boreal forests using a variety of input variables representing climate and/or vegetation structure. Further research can explore the possible advantages of its implementation in land surface schemes over existing approaches.
Divergent patterns of experimental and model derived variables of tundra ecosystem carbon exchange in response to arctic warming

NASA Astrophysics Data System (ADS)

Schaedel, C.; Koven, C.; Celis, G.; Hutchings, J.; Lawrence, D. M.; Mauritz, M.; Pegoraro, E.; Salmon, V. G.; Taylor, M.; Wieder, W. R.; Schuur, E.

2017-12-01

Warming over the Arctic in the last decades has been twice as high as for the rest of the globe and has exposed large amounts of organic carbon to microbial decomposition in permafrost ecosystems. Continued warming and associated changes in soil moisture conditions not only lead to enhanced microbial decomposition from permafrost soil but also enhanced plant carbon uptake. Both processes impact the overall contribution of permafrost carbon dynamics to the global carbon cycle, yet field and modeling studies show large uncertainties in regard to both uptake and release mechanisms. Here, we compare variables associated with ecosystem carbon exchange (GPP: gross primary production; Reco: ecosystem respiration; and NEE: net ecosystem exchange) from eight years of experimental soil warming in moist acidic tundra with the same variables derived from an experimental model (Community Land Model version 4.5: CLM4.5) that simulates the same degree of arctic warming. While soil temperatures and thaw depths exhibited comparable increases with warming between field and model variables, carbon exchange related parameters showed divergent patterns. In the field non-linear responses to experimentally induced permafrost thaw were observed in GPP, Reco, and NEE. Indirect effects of continued soil warming and thaw created changes in soil moisture conditions causing ground surface subsidence and suppressing ecosystem carbon exchange over time. In contrast, the model predicted linear increases in GPP, Reco, and NEE with every year of warming turning the ecosystem into a net annual carbon sink. The field experiment revealed the importance of hydrology in carbon flux responses to permafrost thaw, a complexity that the model may fail to predict. Further parameterization of variables that drive GPP, Reco, and NEE in the model will help to inform and refine future model development.
Characteristics of temperature rise in variable inductor employing magnetorheological fluid driven by a high-frequency pulsed voltage source

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lee, Ho-Young; Kang, In Man, E-mail: imkang@ee.knu.ac.kr; Shon, Chae-Hwa

2015-05-07

A variable inductor with magnetorheological (MR) fluid has been successfully applied to power electronics applications; however, its thermal characteristics have not been investigated. To evaluate the performance of the variable inductor with respect to temperature, we measured the characteristics of temperature rise and developed a numerical analysis technique. The characteristics of temperature rise were determined experimentally and verified numerically by adopting a multiphysics analysis technique. In order to accurately estimate the temperature distribution in a variable inductor with an MR fluid-gap, the thermal solver should import the heat source from the electromagnetic solver to solve the eddy current problem. Tomore » improve accuracy, the B–H curves of the MR fluid under operating temperature were obtained using the magnetic property measurement system. In addition, the Steinmetz equation was applied to evaluate the core loss in a ferrite core. The predicted temperature rise for a variable inductor showed good agreement with the experimental data and the developed numerical technique can be employed to design a variable inductor with a high-frequency pulsed voltage source.« less
Numerical Simulation for Magneto Nanofluid Flow Through a Porous Space with Melting Heat Transfer

NASA Astrophysics Data System (ADS)

Hayat, T.; Shah, Faisal; Alsaedi, A.; Waqas, M.

2018-02-01

Melting heat transfer and non-Darcy porous medium effects in MHD stagnation point flow toward a stretching surface of variable thickness are addressed. Brownian motion and thermophoresis in nanofluid modeling are retained. Zero mass flux condition for concentration at surface is imposed. The problem of ordinary differential system are analyzed numerically through shooting technique. Graphically results of various physical variables on the velocity, temperature and concentration are studied. Skin friction coefficient local Nusselt number and Sherwood number are also addressed through tabulated values. The results described here illustrate that the velocity field is higher via larger melting parameter. However reverse situation is examined for Hartman number. Moreover the influence of thermophoresis parameter on temperature and concentration is noted similar.
Numerical Simulation for Magneto Nanofluid Flow Through a Porous Space with Melting Heat Transfer

NASA Astrophysics Data System (ADS)

Hayat, T.; Shah, Faisal; Alsaedi, A.; Waqas, M.

2018-05-01

Melting heat transfer and non-Darcy porous medium effects in MHD stagnation point flow toward a stretching surface of variable thickness are addressed. Brownian motion and thermophoresis in nanofluid modeling are retained. Zero mass flux condition for concentration at surface is imposed. The problem of ordinary differential system are analyzed numerically through shooting technique. Graphically results of various physical variables on the velocity, temperature and concentration are studied. Skin friction coefficient local Nusselt number and Sherwood number are also addressed through tabulated values. The results described here illustrate that the velocity field is higher via larger melting parameter. However reverse situation is examined for Hartman number. Moreover the influence of thermophoresis parameter on temperature and concentration is noted similar.

Understanding interannual variability in the distribution of, and transport processes affecting, the early life stages of Todarodes pacificus using behavioral-hydrodynamic modeling approaches

NASA Astrophysics Data System (ADS)

Kim, Jung Jin; Stockhausen, William; Kim, Suam; Cho, Yang-Ki; Seo, Gwang-Ho; Lee, Joon-Soo

2015-11-01

To understand interannual variability in the distribution of the early life stages of Todarodes pacificus summer spawning population, and to identify the key transport processes influencing this variability, we used a coupled bio-physical model that combines an individual-based model (IBM) incorporating ontogenetic vertical migration for paralarval behavior and temperature-dependent survival process with a ROMS oceanographic model. Using the distribution of paralarvae observed in the northern East China Sea (ECS) during several field cruises as an end point, the spawning ground for the summer-spawning population was estimated to extend from southeast Jeju Island to the central ECS near 29°N by running the model backwards in time. Running the model forward, interannual variability in the distribution of paralarvae predicted by the model was consistent with that observed in several field surveys; surviving individuals in the northern ECS were substantially more abundant in late July 2006 than in 2007, in agreement with observed paralarval distributions. The total number of surviving individuals at 60 days after release based on the simulation throughout summer spawning period (June-August) was 20,329 for 2006, compared with 13,816 for 2007. The surviving individuals were mainly distributed in the East/Japan Sea (EJS), corresponding to a pathway following the nearshore branch of the Tsushima Warm Current flowing along the Japanese coast during both years. In contrast, the abundance of surviving individuals was extremely low in 2007 compared to 2006 on the Pacific side of Japan. Interannual variability in transport and survival processes made a substantial impact on not only the abundance of surviving paralarvae, but also on the flux of paralarvae to adjacent waters. Our simulation results for between-year variation in paralarval abundance coincide with recruitment (year n + 1) variability of T. pacificus in the field. The agreement between the simulation and field data indicates our model may be useful for predicting the recruitment of T. pacificus.
Within-field variability of plant and soil parameters

NASA Technical Reports Server (NTRS)

Ulaby, F. T. (Principal Investigator); Brisco, B.; Dobson, C.

1981-01-01

The variability of ground truth data collected for vegetation experiments was investigated. Two fields of wheat and one field of corn were sampled on two different dates. The variability of crop and soil parameters within a field, between two fields of the same type, and within a field over time were compared statistically. The number of samples from each test site required in order to be able to determine with confidence the mean and standard deviations for a given variable was determined. Eight samples were found to be adequate for plant height determinations, while twenty samples were required for plant moisture and soil moisture characterization. Eighteen samples were necessary for detecting within field variability over time and for between field variability for the same crop. The necessary sample sites vary according to the physiological growth stage of the crop and recent weather events that affect the moisture and/or height characteristics of the field in question.
Sampling strategies for subsampled segmented EPI PRF thermometry in MR guided high intensity focused ultrasound

PubMed Central

Odéen, Henrik; Todd, Nick; Diakite, Mahamadou; Minalga, Emilee; Payne, Allison; Parker, Dennis L.

2014-01-01

Purpose: To investigate k-space subsampling strategies to achieve fast, large field-of-view (FOV) temperature monitoring using segmented echo planar imaging (EPI) proton resonance frequency shift thermometry for MR guided high intensity focused ultrasound (MRgHIFU) applications. Methods: Five different k-space sampling approaches were investigated, varying sample spacing (equally vs nonequally spaced within the echo train), sampling density (variable sampling density in zero, one, and two dimensions), and utilizing sequential or centric sampling. Three of the schemes utilized sequential sampling with the sampling density varied in zero, one, and two dimensions, to investigate sampling the k-space center more frequently. Two of the schemes utilized centric sampling to acquire the k-space center with a longer echo time for improved phase measurements, and vary the sampling density in zero and two dimensions, respectively. Phantom experiments and a theoretical point spread function analysis were performed to investigate their performance. Variable density sampling in zero and two dimensions was also implemented in a non-EPI GRE pulse sequence for comparison. All subsampled data were reconstructed with a previously described temporally constrained reconstruction (TCR) algorithm. Results: The accuracy of each sampling strategy in measuring the temperature rise in the HIFU focal spot was measured in terms of the root-mean-square-error (RMSE) compared to fully sampled “truth.” For the schemes utilizing sequential sampling, the accuracy was found to improve with the dimensionality of the variable density sampling, giving values of 0.65 °C, 0.49 °C, and 0.35 °C for density variation in zero, one, and two dimensions, respectively. The schemes utilizing centric sampling were found to underestimate the temperature rise, with RMSE values of 1.05 °C and 1.31 °C, for variable density sampling in zero and two dimensions, respectively. Similar subsampling schemes with variable density sampling implemented in zero and two dimensions in a non-EPI GRE pulse sequence both resulted in accurate temperature measurements (RMSE of 0.70 °C and 0.63 °C, respectively). With sequential sampling in the described EPI implementation, temperature monitoring over a 192 × 144 × 135 mm3 FOV with a temporal resolution of 3.6 s was achieved, while keeping the RMSE compared to fully sampled “truth” below 0.35 °C. Conclusions: When segmented EPI readouts are used in conjunction with k-space subsampling for MR thermometry applications, sampling schemes with sequential sampling, with or without variable density sampling, obtain accurate phase and temperature measurements when using a TCR reconstruction algorithm. Improved temperature measurement accuracy can be achieved with variable density sampling. Centric sampling leads to phase bias, resulting in temperature underestimations. PMID:25186406
Variability of Equatorward Transport in the Tropical Southwestern Pacific

NASA Astrophysics Data System (ADS)

Alberty, M. S.; Sprintall, J.; MacKinnon, J. A.; Cravatte, S. E.; Ganachaud, A. S.; Germineaud, C.

2016-02-01

Situated in the Pacific warm pool, the Solomon Sea is a semi-enclosed sea containing a system of low latitude Western boundary currents that serve as the primary source water for the Equatorial Undercurrent. The variability of equatorward heat and volume transport through the Solomon Sea has the capability to modulate regional and basin-scale climate processes, yet there are few and synoptic observations of these fluxes. Here we present the mean and variability of heat and volume transport out of the Solomon Sea observed during the MoorSPICE experiment. MoorSPICE is the Solomon Sea mooring-based observational component of the Southwest Pacific Ocean Circulation and Climate Experiment (SPICE), an international research project working to observe and improve our understanding of the southwest Pacific Ocean circulation and climate. Arrays of moorings were deployed in the outflow channels of the Solomon Sea for July 2012 until March 2014 to resolve the temperature and velocity fields in each strait. In particular we will discuss the phasing of the observed transport variability for each channel compared to that of the satellite-observed monsoonal wind forcing and annual cycle of the mesoscale eddy field.
Designing a better weather display

NASA Astrophysics Data System (ADS)

Ware, Colin; Plumlee, Matthew

2012-01-01

The variables most commonly displayed on weather maps are atmospheric pressure, wind speed and direction, and surface temperature. But they are usually shown separately, not together on a single map. As a design exercise, we set the goal of finding out if it is possible to show all three variables (two 2D scalar fields and a 2D vector field) simultaneously such that values can be accurately read using keys for all variables, a reasonable level of detail is shown, and important meteorological features stand out clearly. Our solution involves employing three perceptual "channels", a color channel, a texture channel, and a motion channel in order to perceptually separate the variables and make them independently readable. We conducted an experiment to evaluate our new design both against a conventional solution, and against a glyph-based solution. The evaluation tested the abilities of novice subjects both to read values using a key, and to see meteorological patterns in the data. Our new scheme was superior especially in the representation of wind patterns using the motion channel, and it also performed well enough in the representation of pressure using the texture channel to suggest it as a viable design alternative.
An improved model for soil surface temperature from air temperature in permafrost regions of Qinghai-Xizang (Tibet) Plateau of China

NASA Astrophysics Data System (ADS)

Hu, Guojie; Wu, Xiaodong; Zhao, Lin; Li, Ren; Wu, Tonghua; Xie, Changwei; Pang, Qiangqiang; Cheng, Guodong

2017-08-01

Soil temperature plays a key role in hydro-thermal processes in environments and is a critical variable linking surface structure to soil processes. There is a need for more accurate temperature simulation models, particularly in Qinghai-Xizang (Tibet) Plateau (QXP). In this study, a model was developed for the simulation of hourly soil surface temperatures with air temperatures. The model incorporated the thermal properties of the soil, vegetation cover, solar radiation, and water flux density and utilized field data collected from Qinghai-Xizang (Tibet) Plateau (QXP). The model was used to simulate the thermal regime at soil depths of 5 cm, 10 cm and 20 cm and results were compared with those from previous models and with experimental measurements of ground temperature at two different locations. The analysis showed that the newly developed model provided better estimates of observed field temperatures, with an average mean absolute error (MAE), root mean square error (RMSE), and the normalized standard error (NSEE) of 1.17 °C, 1.30 °C and 13.84 %, 0.41 °C, 0.49 °C and 5.45 %, 0.13 °C, 0.18 °C and 2.23 % at 5 cm, 10 cm and 20 cm depths, respectively. These findings provide a useful reference for simulating soil temperature and may be incorporated into other ecosystem models requiring soil temperature as an input variable for modeling permafrost changes under global warming.
High-resolution surface analysis for extended-range downscaling with limited-area atmospheric models

NASA Astrophysics Data System (ADS)

Separovic, Leo; Husain, Syed Zahid; Yu, Wei; Fernig, David

2014-12-01

High-resolution limited-area model (LAM) simulations are frequently employed to downscale coarse-resolution objective analyses over a specified area of the globe using high-resolution computational grids. When LAMs are integrated over extended time frames, from months to years, they are prone to deviations in land surface variables that can be harmful to the quality of the simulated near-surface fields. Nudging of the prognostic surface fields toward a reference-gridded data set is therefore devised in order to prevent the atmospheric model from diverging from the expected values. This paper presents a method to generate high-resolution analyses of land-surface variables, such as surface canopy temperature, soil moisture, and snow conditions, to be used for the relaxation of lower boundary conditions in extended-range LAM simulations. The proposed method is based on performing offline simulations with an external surface model, forced with the near-surface meteorological fields derived from short-range forecast, operational analyses, and observed temperatures and humidity. Results show that the outputs of the surface model obtained in the present study have potential to improve the near-surface atmospheric fields in extended-range LAM integrations.
Malonyl CoA decarboxylase deficiency: C to T transition in intron 2 of the MCD gene.

PubMed

Surendran, S; Sacksteder, K A; Gould, S J; Coldwell, J G; Rady, P L; Tyring, S K; Matalon, R

2001-09-15

Malonyl CoA decarboxylase (MCD) is an enzyme involved in the metabolism of fatty acids synthesis. Based on reports of MCD deficiency, this enzyme is particular important in muscle and brain metabolism. Mutations in the MCD gene result in a deficiency of MCD activity, that lead to psychomotor retardation, cardiomyopathy and neonatal death. To date however, only a few patients have been reported with defects in MCD. We report here studies of a patient with MCD deficiency, who presented with hypotonia, cardiomyopathy and psychomotor retardation. DNA sequencing of MCD revealed a homozygous intronic mutation, specifically a -5 C to T transition near the acceptor site for exon 3. RT-PCR amplification of exons 2 and 3 revealed that although mRNA from a normal control sample yielded one major DNA band, the mutant mRNA sample resulted in two distinct DNA fragments. Sequencing of the patient's two RT-PCR products revealed that the larger molecular weight fragments contained exons 2 and 3 as well as the intervening intronic sequence. The smaller size band from the patient contained the properly spliced exons, similar to the normal control. Western blotting analysis of the expressed protein showed only a faint band in the patient sample in contrast to a robust band in the control. In addition, the enzyme activity of the mutant protein was lower than that of the control protein. The data indicate that homozygous mutation in intron 2 disrupt normal splicing of the gene, leading to lower expression of the MCD protein and MCD deficiency. Copyright 2001 Wiley-Liss, Inc.
Urinary CD80 as a Replacement for Renal Biopsy for Diagnosis of Pediatric Minimal Change Disease.

PubMed

Ahmed, Heba Mostafa; Ezzat, Dina Ahmed; Doudar, Noha A; Adel, Mai

2018-03-01

Early diagnosis of minimal change disease (MCD) is challenging in nephrotic children. CD80 is a protein expressed on the surface of podocytes associated with nephrotic syndrome and it is implicated in the induction of proteinuria. This study aimed to investigate the use of urinary CD80 for the diagnosis of MCD. Urinary CD80 levels were evaluated in 36 children with nephrotic syndrome and normal glomerular filtration rate. They were divided into three groups of MCD (n = 21), focal segmental glomerulosclerosis (n = 9), and other glomerulopathies (n = 6). The MCD group was subdivided into 2 of those with remission (n = 11) and those in the active stage (n = 10). Forty healthy children were included as controls. The urinary CD80 level was significantly higher in the MCD group (3.5 ± 2.1 ng/mg creatinine) than in the focal segmental glomerulosclerosis group (1.2 ± 0.5 ng/mg creatinine, P < .001), the other glomerulopathies group (1.4 ± 0.7 ng/mg creatinine, P < .001), and the control group (0.7 ± 0.2 ng/mg creatinine, P < .001), while it showed no significant difference among the non-MCD groups. There was no significant difference between MCD in remission and MCD in relapse, either. A urinary CD80 cutoff value of 1.5 ng/gm creatinine showed a sensitivity of 100% and a specificity of 86% for diagnosis of MCD. Urinary CD80 levels were significantly higher in the children with MCD than in the controls and patients with other causes of nephrotic syndrome.
Validation of two algorithms for managing children with a non-blanching rash.

PubMed

Riordan, F Andrew I; Jones, Laura; Clark, Julia

2016-08-01

Paediatricians are concerned that children who present with a non-blanching rash (NBR) may have meningococcal disease (MCD). Two algorithms have been devised to help identify which children with an NBR have MCD. To evaluate the NBR algorithms' ability to identify children with MCD. The Newcastle-Birmingham-Liverpool (NBL) algorithm was applied retrospectively to three cohorts of children who had presented with NBRs. This algorithm was also piloted in four hospitals, and then used prospectively for 12 months in one hospital. The National Institute for Health and Care Excellence (NICE) algorithm was validated retrospectively using data from all cohorts. The cohorts included 625 children, 145 (23%) of whom had confirmed or probable MCD. Paediatricians empirically treated 324 (52%) children with antibiotics. The NBL algorithm identified all children with MCD and suggested treatment for a further 86 children (sensitivity 100%, specificity 82%). One child with MCD did not receive immediate antibiotic treatment, despite this being suggested by the algorithm. The NICE algorithm suggested 382 children (61%) who should be treated with antibiotics. This included 141 of the 145 children with MCD (sensitivity 97%, specificity 50%). These algorithms may help paediatricians identify children with MCD who present with NBRs. The NBL algorithm may be more specific than the NICE algorithm as it includes fewer features suggesting MCD. The only significant delay in treatment of MCD occurred when the algorithms were not followed. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/
Novel mutation in the CHST6 gene causes macular corneal dystrophy in a black South African family.

PubMed

Carstens, Nadia; Williams, Susan; Goolam, Saadiah; Carmichael, Trevor; Cheung, Ming Sin; Büchmann-Møller, Stine; Sultan, Marc; Staedtler, Frank; Zou, Chao; Swart, Peter; Rice, Dennis S; Lacoste, Arnaud; Paes, Kim; Ramsay, Michèle

2016-07-20

Macular corneal dystrophy (MCD) is a rare autosomal recessive disorder that is characterized by progressive corneal opacity that starts in early childhood and ultimately progresses to blindness in early adulthood. The aim of this study was to identify the cause of MCD in a black South African family with two affected sisters. A multigenerational South African Sotho-speaking family with type I MCD was studied using whole exome sequencing. Variant filtering to identify the MCD-causal mutation included the disease inheritance pattern, variant minor allele frequency and potential functional impact. Ophthalmologic evaluation of the cases revealed a typical MCD phenotype and none of the other family members were affected. An average of 127 713 variants per individual was identified following exome sequencing and approximately 1.2 % were not present in any of the investigated public databases. Variant filtering identified a homozygous E71Q mutation in CHST6, a known MCD-causing gene encoding corneal N-acetyl glucosamine-6-O-sulfotransferase. This E71Q mutation results in a non-conservative amino acid change in a highly conserved functional domain of the human CHST6 that is essential for enzyme activity. We identified a novel E71Q mutation in CHST6 as the MCD-causal mutation in a black South African family with type I MCD. This is the first description of MCD in a black Sub-Saharan African family and therefore contributes valuable insights into the genetic aetiology of this disease, while improving genetic counselling for this and potentially other MCD families.
What Outcomes do Dutch Healthcare Professionals Perceive as Important Before Participation in Moral Case Deliberation?

PubMed

de Snoo-Trimp, Janine; Widdershoven, Guy; Svantesson, Mia; de Vet, Riekie; Molewijk, Bert

2017-05-01

There has been little attention paid to research on the outcomes of clinical ethics support (CES) or critical reflection on what constitutes a good CES outcome. Understanding how CES users perceive the importance of CES outcomes can contribute to a better understanding, use of and normative reflection on CES outcomes. To describe the perceptions of Dutch healthcare professionals on important outcomes of moral case deliberation (MCD), prior to MCD participation, and to compare results between respondents. This mixed-methods study used both the Euro-MCD instrument and semi-structured interviews. Healthcare professionals who were about to implement MCD were recruited from nursing homes, hospitals, psychiatry and mentally disabled care institutions. 331 healthcare professionals completed the Euro-MCD instrument, 13 healthcare professionals were interviewed. The outcomes perceived as most important were 'more open communication', 'better mutual understanding', 'concrete actions', 'see the situation from different perspectives', 'consensus on how to manage the situation' and 'find more courses of action'. Interviewees also perceived improving quality of care, professionalism and the organization as important. Women, nurses, managers and professionals in mentally disabled care rated outcomes more highly than other respondents. Dutch healthcare professionals perceived the MCD outcomes related to collaboration as most important. The empirical findings can contribute to shared ownership of MCD and a more specific use of MCD in different contexts. They can inform international comparative research on different CES types and contribute to normative discussions concerning CES outcomes. Future studies should reflect upon important MCD outcomes after having experienced MCD. © 2017 John Wiley & Sons Ltd.
Climatic variability effects on summer cropping systems of the Iberian Peninsula

NASA Astrophysics Data System (ADS)

Capa-Morocho, M.; Rodríguez-Fonseca, B.; Ruiz-Ramos, M.

2012-04-01

Climate variability and changes in the frequency of extremes events have a direct impact on crop yield and damages. Climate anomalies projections at monthly and yearly timescale allows us for adapting a cropping system (crops, varieties and management) to take advantage of favorable conditions or reduce the effect of adverse conditions. The objective of this work is to develop indices to evaluate the effect of climatic variability in summer cropping systems of Iberian Peninsula, in an attempt of relating yield variability to climate variability, extending the work of Rodríguez-Puebla (2004). This paper analyses the evolution of the yield anomalies of irrigated maize in several representative agricultural locations in Spain with contrasting temperature and precipitation regimes and compare it to the evolution of different patterns of climate variability, extending the methodology of Porter and Semenov (2005). To simulate maize yields observed daily data of radiation, maximum and minimum temperature and precipitation were used. These data were obtained from the State Meteorological Agency of Spain (AEMET). Time series of simulated maize yields were computed with CERES-maize model for periods ranging from 22 to 49 years, depending on the observed climate data available for each location. The computed standardized anomalies yields were projected on different oceanic and atmospheric anomalous fields and the resulting patterns were compared with a set of documented patterns from the National Oceanic and Atmospheric Administration (NOAA). The results can be useful also for climate change impact assessment, providing a scientific basis for selection of climate change scenarios where combined natural and forced variability represent a hazard for agricultural production. Interpretation of impact projections would also be enhanced.
Partial alanine scan of mast cell degranulating peptide (MCD): importance of the histidine- and arginine residues.

PubMed

Buku, Angeliki; Mendlowitz, Milton; Condie, Barry A; Price, Joseph A

2004-06-01

The influence of the two histidine and two arginine residues of mast cell degranulating peptide (MCD) in activity and binding was studied by replacing these amino acids in the MCD sequence with L-alanine. Their histamine releasing activity was determined on rat peritoneal mast cells. Their binding affinity to the FcepsilonRIalpha binding subunit of the human mast cell receptor protein, was carried out using fluorescence polarization. The histamine assay showed that replacement of His13 by Ala o ccurred without loss of activity compared with the activity of MCD. Alanine substitutions for Arg7 and His8 resulted in an approximately 40 fold increase, and for Arg16 in a 14-fold increase in histamine-releasing activity of MCD. The binding affinities of the analogs were tested by competitive displacement of bound fluorescent MCD peptide from the FcepsilonRIalpha binding protein of the mast cell receptor by the Ala analogs using fluorescence polarization. The analogs Ala8 (for His) and Ala16 (for Arg) showed the same binding affinities as MCD, whereas analog Ala7 (for Arg) and analog Ala13 (for His) showed slightly better binding affinity than the parent compound. This study showed that the introduction of alanine residues in these positions resulted in MCD agonists of diverse potency. These findings will be useful in further MCD structure-activity studies.
Impact of Satellite Remote Sensing Data on Simulations of ...

EPA Pesticide Factsheets

We estimated surface salinity flux and solar penetration from satellite data, and performed model simulations to examine the impact of including the satellite estimates on temperature, salinity, and dissolved oxygen distributions on the Louisiana continental shelf (LCS) near the annual hypoxic zone. Rainfall data from the Tropical Rainfall Measurement Mission (TRMM) were used for the salinity flux, and the diffuse attenuation coefficient (Kd) from Moderate Resolution Imaging Spectroradiometer (MODIS) were used for solar penetration. Improvements in the model results in comparison with in situ observations occurred when the two types of satellite data were included. Without inclusion of the satellite-derived surface salinity flux, realistic monthly variability in the model salinity fields was observed, but important inter-annual variability wasmissed. Without inclusion of the satellite-derived light attenuation, model bottom water temperatures were too high nearshore due to excessive penetration of solar irradiance. In general, these salinity and temperature errors led to model stratification that was too weak, and the model failed to capture observed spatial and temporal variability in water-column vertical stratification. Inclusion of the satellite data improved temperature and salinity predictions and the vertical stratification was strengthened, which improved prediction of bottom-water dissolved oxygen. The model-predicted area of bottom-water hypoxia on the
A five-year study of the impact of nitrogen addition on methane uptake in alpine grassland.

PubMed

Yue, Ping; Li, Kaihui; Gong, Yanming; Hu, Yukun; Mohammat, Anwar; Christie, Peter; Liu, Xuejun

2016-08-30

It remains unclear how nitrogen (N) deposition affects soil methane (CH4) uptake in semiarid and arid zones. An in situ field experiment was conducted from 2010 to 2014 to systematically study the effect of various N application rates (0, 10, 30, and 90 kg N ha(-1) yr(-1)) on CH4 flux in alpine grassland in the Tianshan Mountains. No significant influence of N addition on CH4 uptake was found. Initially the CH4 uptake rate increased with increasing N application rate by up to 11.5% in 2011 and then there was gradual inhibition by 2014. However, the between-year variability in CH4 uptake was very highly significant with average uptake ranging from 52.9 to 106.6 μg C m(-2) h(-1) and the rate depended largely on seasonal variability in precipitation and temperature. CH4 uptake was positively correlated with soil temperature, air temperature and to a lesser extent with precipitation, and was negatively correlated with soil moisture and NO3(-)-N content. The results indicate that between-year variability in CH4 uptake was impacted by precipitation and temperature and was not sensitive to elevated N deposition in alpine grassland.
A five-year study of the impact of nitrogen addition on methane uptake in alpine grassland

PubMed Central

Yue, Ping; Li, Kaihui; Gong, Yanming; Hu, Yukun; Mohammat, Anwar; Christie, Peter; Liu, Xuejun

2016-01-01

It remains unclear how nitrogen (N) deposition affects soil methane (CH4) uptake in semiarid and arid zones. An in situ field experiment was conducted from 2010 to 2014 to systematically study the effect of various N application rates (0, 10, 30, and 90 kg N ha−1 yr−1) on CH4 flux in alpine grassland in the Tianshan Mountains. No significant influence of N addition on CH4 uptake was found. Initially the CH4 uptake rate increased with increasing N application rate by up to 11.5% in 2011 and then there was gradual inhibition by 2014. However, the between-year variability in CH4 uptake was very highly significant with average uptake ranging from 52.9 to 106.6 μg C m−2 h−1 and the rate depended largely on seasonal variability in precipitation and temperature. CH4 uptake was positively correlated with soil temperature, air temperature and to a lesser extent with precipitation, and was negatively correlated with soil moisture and NO3−-N content. The results indicate that between-year variability in CH4 uptake was impacted by precipitation and temperature and was not sensitive to elevated N deposition in alpine grassland. PMID:27571892
A new approach used to explore associations of current Ambrosia pollen levels with current and past meteorological elements

NASA Astrophysics Data System (ADS)

Matyasovszky, István; Makra, László; Csépe, Zoltán; Deák, Áron József; Pál-Molnár, Elemér; Fülöp, Andrea; Tusnády, Gábor

2015-09-01

The paper examines the sensitivity of daily airborne Ambrosia (ragweed) pollen levels of a current pollen season not only on daily values of meteorological variables during this season but also on the past meteorological conditions. The results obtained from a 19-year data set including daily ragweed pollen counts and ten daily meteorological variables are evaluated with special focus on the interactions between the phyto-physiological processes and the meteorological elements. Instead of a Pearson correlation measuring the strength of the linear relationship between two random variables, a generalised correlation that measures every kind of relationship between random vectors was used. These latter correlations between arrays of daily values of the ten meteorological elements and the array of daily ragweed pollen concentrations during the current pollen season were calculated. For the current pollen season, the six most important variables are two temperature variables (mean and minimum temperatures), two humidity variables (dew point depression and rainfall) and two variables characterising the mixing of the air (wind speed and the height of the planetary boundary layer). The six most important meteorological variables before the current pollen season contain four temperature variables (mean, maximum, minimum temperatures and soil temperature) and two variables that characterise large-scale weather patterns (sea level pressure and the height of the planetary boundary layer). Key periods of the past meteorological variables before the current pollen season have been identified. The importance of this kind of analysis is that a knowledge of the past meteorological conditions may contribute to a better prediction of the upcoming pollen season.
A new approach used to explore associations of current Ambrosia pollen levels with current and past meteorological elements.

PubMed

Matyasovszky, István; Makra, László; Csépe, Zoltán; Deák, Áron József; Pál-Molnár, Elemér; Fülöp, Andrea; Tusnády, Gábor

2015-09-01

The paper examines the sensitivity of daily airborne Ambrosia (ragweed) pollen levels of a current pollen season not only on daily values of meteorological variables during this season but also on the past meteorological conditions. The results obtained from a 19-year data set including daily ragweed pollen counts and ten daily meteorological variables are evaluated with special focus on the interactions between the phyto-physiological processes and the meteorological elements. Instead of a Pearson correlation measuring the strength of the linear relationship between two random variables, a generalised correlation that measures every kind of relationship between random vectors was used. These latter correlations between arrays of daily values of the ten meteorological elements and the array of daily ragweed pollen concentrations during the current pollen season were calculated. For the current pollen season, the six most important variables are two temperature variables (mean and minimum temperatures), two humidity variables (dew point depression and rainfall) and two variables characterising the mixing of the air (wind speed and the height of the planetary boundary layer). The six most important meteorological variables before the current pollen season contain four temperature variables (mean, maximum, minimum temperatures and soil temperature) and two variables that characterise large-scale weather patterns (sea level pressure and the height of the planetary boundary layer). Key periods of the past meteorological variables before the current pollen season have been identified. The importance of this kind of analysis is that a knowledge of the past meteorological conditions may contribute to a better prediction of the upcoming pollen season.
Atmospheric Teleconnection and Climate Variability: Affecting Rice Productivity of Bihar, India

NASA Astrophysics Data System (ADS)

Saini, A.

2017-12-01

Climate variability brought various negative results to the environment around us and area under rice crop in Bihar has also faced a lot of negative impacts due to variability in temperature and rainfall. Location of Bihar in Northern Plain of India automatically makes it prime location for agriculture and therefore variability in climatic variables brings highly sensitive results to the agricultural production (especially rice). In this study, rainfall and temperature variables are taken into consideration to investigate the impact on rice cultivated area. Change in climate variable with the passage of time is prevailing since the start of geological time scale, how the variability in climate variables has affected the major crops. Climate index of Pacific Ocean and Indian Ocean influences the seasonal weather in Bihar and therefore role of ENSO and IOD is an interesting point of inquiry. Does there exists direct relation between climate variability and area under agricultural crops? How many important variables directly signals towards the change in area under agriculture production? These entire questions are answered with respect to change in area under rice cultivation of Bihar State of India. Temperature, rainfall and ENSO are a good indicator with respect to rice cultivation in Indian subcontinent. Impact on the area under rice has been signaled through ONI, Niño3 and DMI. Increasing range of temperature in the rice productivity declining years is observed since 1990.

Further studies on the structural requirements for mast cell degranulating (MCD) peptide-mediated histamine release.

PubMed

Buku, A; Price, J A

2001-12-01

Mast cell degranulating (MCD) peptide was modified in its two disulfide bridges and in the two arginine residues in order to measure the ability of these analogs to induce histamine release from mast cells in vitro. Analogs prepared were [Ala(3,15)]MCD, [Ala(5,19)]MCD, [Orn(16)]MCD, and [Orn(7,16)]MCD. Their histamine-releasing activity was determined spectrofluorometrically with peritoneal mast cells. The monocyclic analogs in which the cysteine residues were replaced pairwise with alanine residues showed three-to ten-fold diminished histamine-releasing activity respectively, compared with the parent MCD peptide. Substantial increases in activity were observed where arginine residues were replaced by ornithines. The ornithine-mono substituted analog showed an almost six-fold increase and the ornithine-doubly substituted analog three-fold increase in histamine-releasing activity compared with the parent MCD peptide. The structural changes associated with these activities were followed by circular dichroism (CD) spectroscopy. Changes in the shape and ellipticity of the CD spectra reflected a role for the disulfide bonds and the two arginine residues in the overall conformation and biological activity of the molecule.
Tannat grape composition responses to spatial variability of temperature in an Uruguay's coastal wine region

NASA Astrophysics Data System (ADS)

Fourment, Mercedes; Ferrer, Milka; González-Neves, Gustavo; Barbeau, Gérard; Bonnardot, Valérie; Quénol, Hervé

2017-09-01

Spatial variability of temperature was studied in relation to the berry basic composition and secondary compounds of the Tannat cultivar at harvest from vineyards located in Canelones and Montevideo, the most important wine region of Uruguay. Monitoring of berries and recording of temperature were performed in 10 commercial vineyards of Tannat situated in the southern coastal wine region of the country for three vintages (2012, 2013, and 2014). Results from a multivariate correlation analysis between berry composition and temperature over the three vintages showed that (1) Tannat responses to spatial variability of temperature were different over the vintages, (2) correlations between secondary metabolites and temperature were higher than those between primary metabolites, and (3) correlation values between berry composition and climate variables increased when ripening occurred under dry conditions (below average rainfall). For a particular studied vintage (2013), temperatures explained 82.5% of the spatial variability of the berry composition. Daily thermal amplitude was found to be the most important spatial mode of variability with lower values recorded at plots nearest to the sea and more exposed to La Plata River. The highest levels in secondary compounds were found in berries issued from plots situated as far as 18.3 km from La Plata River. The increasing knowledge of temperature spatial variability and its impact on grape berry composition contributes to providing possible issues to adapt grapevine to climate change.
A Two Million Year Equatorial Paleogeomagnetic and Relative Paleointensity Record from IODP Site U1489 in the West Pacific Warm Pool: Towards an Improved Tuning Target.

NASA Astrophysics Data System (ADS)

He, L.; Chen, L.; Wang, X.; Zhao, X.; Xi, X.; Chen, R.

2016-12-01

International Ocean Discovery Program (IODP) Expedition 363 drilled nine sites in the West Pacific Warm Pool in October-December 2016. IODP Site U1489 (02°07.19'N, 141°01.67'E, 3421 meters water depth) located on the Eauripik Rise was drilled to a depth of 270 meters below sea floor using the advanced piston corer. Shipboard data revealed the upper 112 meters composite depth (mcd) consist of clay-rich nanno fossil ooze and contain all twenty-two geomagnetic reversals over the last 5 million years (Myrs). Shipboard generated rock magnetic data and post-cruise hysteresis data suggest the paleomagnetic record is carried by fine-grained pseudo-single domain magnetite. A shipboard estimate of relative paleointensity (RPI) was generated by normalizing the natural remanent magnetization (NRM) intensity after 15mT peak alternating field (AF) demagnetization of the shipboard half core measurement by whole round magnetic susceptibility (MS). Coherence of the NRM15mT/MS record with existing RPI stacks over the last 2 Myrs highlighted the potential for development of a RPI record back to the earliest Pliocene. Here we present the first u-channel measurements of the upper 40 mcd from Site U1489 spanning the last 2 Myrs. The NRM was measured at 1 cm intervals after stepwise AF demagnetization in peak fields of 15-100mT. Component inclination plots around that predicted by a geocentric axial dipole field and maximum angular deviation values are so far generally < 3° implying the paleomagnetic record is well resolved at Site U1489. Measurements of MS and anhysteretic remanent magnetization (ARM) characterize the environmental variability and provide a normalizer for the NRM to generate an estimate of RPI. The chronology is iteratively developed, initially based on polarity reversals boundaries, then by tuning MS to astronomical precession. We compare our RPI estimates to PISO-1500 and NARPI-2200 whose chronologies are based upon δ18O of benthic foraminifera to assess the appropriateness of orbital tuning and further constrain the U1489 chronology. Future plans include the measurement of the full 5 Myr sequence and integration of the RPI record with the benthic δ18O chronology over the same period to improve our understanding of the paleogeomagnetic record and provide a robust tuning target extending through the Pliocene.
A Two Million Year Equatorial Paleogeomagnetic and Relative Paleointensity Record from IODP Site U1489 in the West Pacific Warm Pool: Towards an Improved Tuning Target.

NASA Astrophysics Data System (ADS)

Hatfield, R. G.; Stoner, J. S.; Kumagai, Y.

2017-12-01

International Ocean Discovery Program (IODP) Expedition 363 drilled nine sites in the West Pacific Warm Pool in October-December 2016. IODP Site U1489 (02°07.19'N, 141°01.67'E, 3421 meters water depth) located on the Eauripik Rise was drilled to a depth of 270 meters below sea floor using the advanced piston corer. Shipboard data revealed the upper 112 meters composite depth (mcd) consist of clay-rich nanno fossil ooze and contain all twenty-two geomagnetic reversals over the last 5 million years (Myrs). Shipboard generated rock magnetic data and post-cruise hysteresis data suggest the paleomagnetic record is carried by fine-grained pseudo-single domain magnetite. A shipboard estimate of relative paleointensity (RPI) was generated by normalizing the natural remanent magnetization (NRM) intensity after 15mT peak alternating field (AF) demagnetization of the shipboard half core measurement by whole round magnetic susceptibility (MS). Coherence of the NRM15mT/MS record with existing RPI stacks over the last 2 Myrs highlighted the potential for development of a RPI record back to the earliest Pliocene. Here we present the first u-channel measurements of the upper 40 mcd from Site U1489 spanning the last 2 Myrs. The NRM was measured at 1 cm intervals after stepwise AF demagnetization in peak fields of 15-100mT. Component inclination plots around that predicted by a geocentric axial dipole field and maximum angular deviation values are so far generally < 3° implying the paleomagnetic record is well resolved at Site U1489. Measurements of MS and anhysteretic remanent magnetization (ARM) characterize the environmental variability and provide a normalizer for the NRM to generate an estimate of RPI. The chronology is iteratively developed, initially based on polarity reversals boundaries, then by tuning MS to astronomical precession. We compare our RPI estimates to PISO-1500 and NARPI-2200 whose chronologies are based upon δ18O of benthic foraminifera to assess the appropriateness of orbital tuning and further constrain the U1489 chronology. Future plans include the measurement of the full 5 Myr sequence and integration of the RPI record with the benthic δ18O chronology over the same period to improve our understanding of the paleogeomagnetic record and provide a robust tuning target extending through the Pliocene.
Snow-atmosphere coupling and its impact on temperature variability and extremes over North America

NASA Astrophysics Data System (ADS)

Diro, G. T.; Sushama, L.; Huziy, O.

2018-04-01

The impact of snow-atmosphere coupling on climate variability and extremes over North America is investigated using modeling experiments with the fifth generation Canadian Regional Climate Model (CRCM5). To this end, two CRCM5 simulations driven by ERA-Interim reanalysis for the 1981-2010 period are performed, where snow cover and depth are prescribed (uncoupled) in one simulation while they evolve interactively (coupled) during model integration in the second one. Results indicate systematic influence of snow cover and snow depth variability on the inter-annual variability of soil and air temperatures during winter and spring seasons. Inter-annual variability of air temperature is larger in the coupled simulation, with snow cover and depth variability accounting for 40-60% of winter temperature variability over the Mid-west, Northern Great Plains and over the Canadian Prairies. The contribution of snow variability reaches even more than 70% during spring and the regions of high snow-temperature coupling extend north of the boreal forests. The dominant process contributing to the snow-atmosphere coupling is the albedo effect in winter, while the hydrological effect controls the coupling in spring. Snow cover/depth variability at different locations is also found to affect extremes. For instance, variability of cold-spell characteristics is sensitive to snow cover/depth variation over the Mid-west and Northern Great Plains, whereas, warm-spell variability is sensitive to snow variation primarily in regions with climatologically extensive snow cover such as northeast Canada and the Rockies. Furthermore, snow-atmosphere interactions appear to have contributed to enhancing the number of cold spell days during the 2002 spring, which is the coldest recorded during the study period, by over 50%, over western North America. Additional results also provide useful information on the importance of the interactions of snow with large-scale mode of variability in modulating temperature extreme characteristics.
The effect of temperature on amount and structure of motor variability during 2-minute maximum voluntary contraction.

PubMed

Brazaitis, Marius; Skurvydas, Albertas; Pukėnas, Kazimieras; Daniuseviciūtė, Laura; Mickevicienė, Dalia; Solianik, Rima

2012-11-01

In this study, we questioned whether local cooling of muscle or heating involving core and muscle temperatures are the main indicators for force variability. Ten volunteers performed a 2-min maximum voluntary contraction (MVC) of the knee extensors under control (CON) conditions after passive heating (HT) and cooling (CL) of the lower body. HT increased muscle and rectal temperatures, whereas CL lowered muscle temperature but did not affect rectal temperature. During 2-min MVC, peak force decreased to a lower level in HT compared with CON and CL experiments. Greater central fatigue was found in the HT experiment, and there was less in the CL experiment than in the CON experiment. Increased core and muscle temperature increased physiological tremor and the amount and structural complexity of force variability of the exercising muscles, whereas local muscle cooling decreased all force variability variables measured. Copyright © 2012 Wiley Periodicals, Inc.
Spatially-Resolved Influence of Temperature and Salinity on Stock and Recruitment Variability of Commercially Important Fishes in the North Sea

PubMed Central

Akimova, Anna; Núñez-Riboni, Ismael; Kempf, Alexander; Taylor, Marc H.

2016-01-01

Understanding of the processes affecting recruitment of commercially important fish species is one of the major challenges in fisheries science. Towards this aim, we investigated the relation between North Sea hydrography (temperature and salinity) and fish stock variables (recruitment, spawning stock biomass and pre-recruitment survival index) for 9 commercially important fishes using spatially-resolved cross-correlation analysis. We used high-resolution (0.2° × 0.2°) hydrographic data fields matching the maximal temporal extent of the fish population assessments (1948–2013). Our approach allowed for the identification of regions in the North Sea where environmental variables seem to be more influential on the fish stocks, as well as the regions of a lesser or nil influence. Our results confirmed previously demonstrated negative correlations between temperature and recruitment of cod and plaice and identified regions of the strongest correlations (German Bight for plaice and north-western North Sea for cod). We also revealed a positive correlation between herring spawning stock biomass and temperature in the Orkney-Shetland area, as well as a negative correlation between sole pre-recruitment survival index and temperature in the German Bight. A strong positive correlation between sprat stock variables and salinity in the central North Sea was also found. To our knowledge the results concerning correlations between North Sea hydrography and stocks’ dynamics of herring, sole and sprat are novel. The new information about spatial distribution of the correlation provides an additional help to identify mechanisms underlying these correlations. As an illustration of the utility of these results for fishery management, an example is provided that incorporates the identified environmental covariates in stock-recruitment models. PMID:27584155
Influence of spatial and temporal variability of subsurface soil moisture and temperature on vapour intrusion

NASA Astrophysics Data System (ADS)

Bekele, Dawit N.; Naidu, Ravi; Chadalavada, Sreenivasulu

2014-05-01

A comprehensive field study was conducted at a site contaminated with chlorinated solvents, mainly trichloroethylene (TCE), to investigate the influence of subsurface soil moisture and temperature on vapour intrusion (VI) into built structures. Existing approaches to predict the risk of VI intrusion into buildings assume homogeneous or discrete layers in the vadose zone through which TCE migrates from an underlying source zone. In reality, the subsurface of the majority of contaminated sites will be subject to significant variations in moisture and temperature. Detailed site-specific data were measured contemporaneously to evaluate the impact of spatial and temporal variability of subsurface soil properties on VI exposure assessment. The results revealed that indoor air vapour concentrations would be affected by spatial and temporal variability of subsurface soil moisture and temperature. The monthly monitoring of soil-gas concentrations over a period of one year at a depth of 3 m across the study site demonstrated significant variation in TCE vapour concentrations, which ranged from 480 to 629,308 μg/m3. Soil-gas wells at 1 m depth exhibited high seasonal variability in TCE vapour concentrations with a coefficient of variation 1.02 in comparison with values of 0.88 and 0.74 in 2 m and 3 m wells, respectively. Contour plots of the soil-gas TCE plume during wet and dry seasons showed that the plume moved across the site, hence locations of soil-gas monitoring wells for human risk assessment is a site specific decision. Subsurface soil-gas vapour plume characterisation at the study site demonstrates that assessment for VI is greatly influenced by subsurface soil properties such as temperature and moisture that fluctuate with the seasons of the year.
High Variability in Cellular Stoichiometry of Carbon, Nitrogen, and Phosphorus Within Classes of Marine Eukaryotic Phytoplankton Under Sufficient Nutrient Conditions.

PubMed

Garcia, Nathan S; Sexton, Julie; Riggins, Tracey; Brown, Jeff; Lomas, Michael W; Martiny, Adam C

2018-01-01

Current hypotheses suggest that cellular elemental stoichiometry of marine eukaryotic phytoplankton such as the ratios of cellular carbon:nitrogen:phosphorus (C:N:P) vary between phylogenetic groups. To investigate how phylogenetic structure, cell volume, growth rate, and temperature interact to affect the cellular elemental stoichiometry of marine eukaryotic phytoplankton, we examined the C:N:P composition in 30 isolates across 7 classes of marine phytoplankton that were grown with a sufficient supply of nutrients and nitrate as the nitrogen source. The isolates covered a wide range in cell volume (5 orders of magnitude), growth rate (<0.01-0.9 d -1 ), and habitat temperature (2-24°C). Our analysis indicates that C:N:P is highly variable, with statistical model residuals accounting for over half of the total variance and no relationship between phylogeny and elemental stoichiometry. Furthermore, our data indicated that variability in C:P, N:P, and C:N within Bacillariophyceae (diatoms) was as high as that among all of the isolates that we examined. In addition, a linear statistical model identified a positive relationship between diatom cell volume and C:P and N:P. Among all of the isolates that we examined, the statistical model identified temperature as a significant factor, consistent with the temperature-dependent translation efficiency model, but temperature only explained 5% of the total statistical model variance. While some of our results support data from previous field studies, the high variability of elemental ratios within Bacillariophyceae contradicts previous work that suggests that this cosmopolitan group of microalgae has consistently low C:P and N:P ratios in comparison with other groups.
Temperature variability during targeted temperature management is not associated with neurological outcomes following cardiac arrest.

PubMed

Nayeri, Arash; Bhatia, Nirmanmoh; Holmes, Benjamin; Borges, Nyal; Armstrong, William; Xu, Meng; Farber-Eger, Eric; Wells, Quinn S; McPherson, John A

2017-06-01

Recent studies on comatose survivors of cardiac arrest undergoing targeted temperature management (TTM) have shown similar outcomes at multiple target temperatures. However, details regarding core temperature variability during TTM and its prognostic implications remain largely unknown. We sought to assess the association between core temperature variability and neurological outcomes in patients undergoing TTM following cardiac arrest. We analyzed a prospectively collected cohort of 242 patients treated with TTM following cardiac arrest at a tertiary care hospital between 2007 and 2014. Core temperature variability was defined as the statistical variance (i.e. standard deviation squared) amongst all core temperature recordings during the maintenance phase of TTM. Poor neurological outcome at hospital discharge, defined as a Cerebral Performance Category (CPC) score>2, was the primary outcome. Death prior to hospital discharge was assessed as the secondary outcome. Multivariable logistic regression was used to examine the association between temperature variability and neurological outcome or death at hospital discharge. A poor neurological outcome was observed in 147 (61%) patients and 136 (56%) patients died prior to hospital discharge. In multivariable logistic regression, increased core temperature variability was not associated with increased odds of poor neurological outcomes (OR 0.38, 95% CI 0.11-1.38, p=0.142) or death (OR 0.43, 95% CI 0.12-1.53, p=0.193) at hospital discharge. In this study, individual core temperature variability during TTM was not associated with poor neurological outcomes or death at hospital discharge. Copyright © 2017 Elsevier Inc. All rights reserved.
Frost Growth and Densification on a Flat Surface in Laminar Flow with Variable Humidity

NASA Technical Reports Server (NTRS)

Kandula, M.

2012-01-01

Experiments are performed concerning frost growth and densification in laminar flow over a flat surface under conditions of constant and variable humidity. The flat plate test specimen is made of aluminum-6031, and has dimensions of 0.3 mx0.3 mx6.35 mm. Results for the first variable humidity case are obtained for a plate temperature of 255.4 K, air velocity of 1.77 m/s, air temperature of 295.1 K, and a relative humidity continuously ranging from 81 to 54%. The second variable humidity test case corresponds to plate temperature of 255.4 K, air velocity of 2.44 m/s, air temperature of 291.8 K, and a relative humidity ranging from 66 to 59%. Results for the constant humidity case are obtained for a plate temperature of 263.7 K, air velocity of 1.7 m/s, air temperature of 295 K, and a relative humidity of 71.6 %. Comparisons of the data with the author's frost model extended to accommodate variable humidity suggest satisfactory agreement between the theory and the data for both constant and variable humidity.
The absence of an Atlantic imprint on the multidecadal variability of wintertime European temperature.

PubMed

Yamamoto, Ayako; Palter, Jaime B

2016-03-15

Northern Hemisphere climate responds sensitively to multidecadal variability in North Atlantic sea surface temperature (SST). It is therefore surprising that an imprint of such variability is conspicuously absent in wintertime western European temperature, despite that Europe's climate is strongly influenced by its neighbouring ocean, where multidecadal variability in basin-average SST persists in all seasons. Here we trace the cause of this missing imprint to a dynamic anomaly of the atmospheric circulation that masks its thermodynamic response to SST anomalies. Specifically, differences in the pathways Lagrangian particles take to Europe during anomalous SST winters suppress the expected fluctuations in air-sea heat exchange accumulated along those trajectories. Because decadal variability in North Atlantic-average SST may be driven partly by the Atlantic Meridional Overturning Circulation (AMOC), the atmosphere's dynamical adjustment to this mode of variability may have important implications for the European wintertime temperature response to a projected twenty-first century AMOC decline.
DOE Office of Scientific and Technical Information (OSTI.GOV)

Ogawa, E.; Suzuki, S.; Tsuzuki, H.

Cadmium-1l5m-chloride was intraperitoneally administered to mice, and retention and distribution investigated. Various drugs were also examined for / sup 115m/Cd- eliminating effect. Results are as follows: The daily decrement curve of the whole-body radioactivity represents the sum of two exponential functions. The excretion of /sup 115m/Cd was greater in feces and less in urine. The excretion continued for 5 days, after which it was hardly seen. Until 6 hr, / sup 115m/Cd concentration was the highest in the liver, followed by the pancreas, kidney, spleen, testis, bone, and blood in the descending order. In the 24-hr value, the kidney exceededmore » the pancreas. The subcellular distribution of /sup 115m/Cd in the liver and kidney 1 hr and 18 days after i.p. administration was greater in the supernatant fraction in both male and female mice than the . other fractions. In 3 day experiments, these results show that the drugs which are effective on eliminating /sup 115m/Cd are chelating agents of aminopolycarboxylic acid group such as DTPA, BADE and EDTA, and BAL, however even the most effective, DTPA, failed to exert an eliminating effect when given later than 24 hr following /sup 115m/Cd administration. Monothiol compounds such as glutathione, 2- mercaptopropionyl glycine, L-cysteine, L-cysteinylglycine, mercaptoacetic acid, and penicillamine were often found to increase /sup 115m/Cd concentration in the kidney and testes. When stable CdCl/sub 2/ was added as a carrier, the whole- body retention of /sup 115m/Cd decreased, and /supo 115m/Cd uptake by the testes also diminished. The addition of HgCl/sub 2/ produced significant decrease in renal uptake of /sup 115m/Cd. The elimination of /sup 115m/Cd was unaffected by the administration of ZnSO/sub 4/, MgSO/sub 4/, mercurial diuretics, furosemide, Na-ferrocyanate, and Na-alginate. (auth)« less
Physicochemical, pharmacokinetic, efficacy and toxicity profiling of a potential nitrofuranyl methyl piperazine derivative IIIM-MCD-211 for oral tuberculosis therapy via in-silico-in-vitro-in-vivo approach.

PubMed

Magotra, Asmita; Sharma, Anjna; Singh, Samsher; Ojha, Probir Kumar; Kumar, Sunil; Bokolia, Naveen; Wazir, Priya; Sharma, Shweta; Khan, Inshad Ali; Singh, Parvinder Pal; Vishwakarma, Ram A; Singh, Gurdarshan; Nandi, Utpal

2018-02-01

Recent tuberculosis (TB) drug discovery programme involve continuous pursuit for new chemical entity (NCE) which can be not only effective against both susceptible and resistant strains of Mycobacterium tuberculosis (Mtb) but also safe and faster acting with the target, thereby shortening the prolonged TB treatments. We have identified a potential nitrofuranyl methyl piperazine derivative, IIIM-MCD-211 as new antitubercular agent with minimum inhibitory concentration (MIC) value of 0.0072 μM against H37Rv strain. Objective of the present study is to investigate physicochemical, pharmacokinetic, efficacy and toxicity profile using in-silico, in-vitro and in-vivo model in comprehensive manner to assess the likelihood of developing IIIM-MCD-211 as a clinical candidate. Results of computational prediction reveal that compound does not violate Lipinski's, Veber's and Jorgensen's rule linked with drug like properties and oral bioavailability. Experimentally, IIIM-MCD-211 exhibits excellent lipophilicity that is optimal for oral administration. IIIM-MCD-211 displays evidence of P-glycoprotein (P-gp) induction but no inhibition ability in rhodamine cell exclusion assay. IIIM-MCD-211 shows high permeability and plasma protein binding based on parallel artificial membrane permeability assay (PAMPA) and rapid equilibrium dialysis (RED) assay model, respectively. IIIM-MCD-211 has adequate metabolic stability in rat liver microsomes (RLM) and favourable pharmacokinetics with admirable correlation during dose escalation study in Swiss mice. IIIM-MCD-211 has capability to appear into highly perfusable tissues. IIIM-MCD-211 is able to actively prevent progression of TB infection in chronic infection mice model. IIIM-MCD-211 shows no substantial cytotoxicity in HepG2 cell line. In acute toxicity study, significant increase of total white blood cell (WBC) count in treatment group as compared to control group is observed. Overall, amenable preclinical data make IIIM-MCD-211 ideal candidate for further development of oral anti-TB agent. Copyright © 2017 Elsevier Ltd. All rights reserved.
Clinical and pathological characteristics of HIV- and HHV-8–negative Castleman disease

PubMed Central

Yu, Li; Tu, Meifeng; Cortes, Jorge; Xu-Monette, Zijun Y.; Miranda, Roberto N.; Zhang, Jun; Orlowski, Robert Z.; Neelapu, Sattva; Boddu, Prajwal C.; Akosile, Mary A.; Uldrick, Thomas S.; Yarchoan, Robert; Medeiros, L. Jeffrey; Li, Yong; Fajgenbaum, David C.

2017-01-01

Castleman disease (CD) comprises 3 poorly understood lymphoproliferative variants sharing several common histopathological features. Unicentric CD (UCD) is localized to a single region of lymph nodes. Multicentric CD (MCD) manifests with systemic inflammatory symptoms and organ dysfunction due to cytokine dysregulation and involves multiple lymph node regions. Human herpesvirus 8 (HHV-8) causes MCD (HHV-8–associated MCD) in immunocompromised individuals, such as HIV-infected patients. However, >50% of MCD cases are HIV and HHV-8 negative (defined as idiopathic [iMCD]). The clinical and biological behavior of CD remains poorly elucidated. Here, we analyzed the clinicopathologic features of 74 patients (43 with UCD and 31 with iMCD) and therapeutic response of 96 patients (43 with UCD and 53 with iMCD) with HIV-/HHV-8–negative CD compared with 51 HIV-/HHV-8–positive patients. Systemic inflammatory symptoms and elevated inflammatory factors were more common in iMCD patients than UCD patients. Abnormal bone marrow features were more frequent in iMCD (77.0%) than UCD (45%); the most frequent was plasmacytosis, which was seen in 3% to 30.4% of marrow cells. In the lymph nodes, higher numbers of CD3+ lymphocytes (median, 58.88 ± 20.57) and lower frequency of CD19+/CD5+ (median, 5.88 ± 6.52) were observed in iMCD patients compared with UCD patients (median CD3+ cells, 43.19 ± 17.37; median CD19+/CD5+ cells, 17.37 ± 15.80). Complete surgical resection is a better option for patients with UCD. Siltuximab had a greater proportion of complete responses and longer progression-free survival (PFS) for iMCD than rituximab. Centricity, histopathological type, and anemia significantly impacted PFS. This study reveals that CD represents a heterogeneous group of diseases with differential immunophenotypic profiling and treatment response. PMID:28100459
Least-rattling feedback from strong time-scale separation

NASA Astrophysics Data System (ADS)

Chvykov, Pavel; England, Jeremy

2018-03-01

In most interacting many-body systems associated with some "emergent phenomena," we can identify subgroups of degrees of freedom that relax on dramatically different time scales. Time-scale separation of this kind is particularly helpful in nonequilibrium systems where only the fast variables are subjected to external driving; in such a case, it may be shown through elimination of fast variables that the slow coordinates effectively experience a thermal bath of spatially varying temperature. In this paper, we investigate how such a temperature landscape arises according to how the slow variables affect the character of the driven quasisteady state reached by the fast variables. Brownian motion in the presence of spatial temperature gradients is known to lead to the accumulation of probability density in low-temperature regions. Here, we focus on the implications of attraction to low effective temperature for the long-term evolution of slow variables. After quantitatively deriving the temperature landscape for a general class of overdamped systems using a path-integral technique, we then illustrate in a simple dynamical system how the attraction to low effective temperature has a fine-tuning effect on the slow variable, selecting configurations that bring about exceptionally low force fluctuation in the fast-variable steady state. We furthermore demonstrate that a particularly strong effect of this kind can take place when the slow variable is tuned to bring about orderly, integrable motion in the fast dynamics that avoids thermalizing energy absorbed from the drive. We thus point to a potentially general feedback mechanism in multi-time-scale active systems, that leads to the exploration of slow variable space, as if in search of fine tuning for a "least-rattling" response in the fast coordinates.
Spatial clustering and meteorological drivers of summer ozone in Europe

NASA Astrophysics Data System (ADS)

Carro-Calvo, Leopoldo; Ordóñez, Carlos; García-Herrera, Ricardo; Schnell, Jordan L.

2017-10-01

We have applied the k-means clustering technique on a maximum daily 8-h running average near-surface ozone (MDA8 O3) gridded dataset over Europe at 1° × 1° resolution for summer 1998-2012. This has resulted in a spatial division of nine regions where ozone presents coherent spatiotemporal patterns. The role of meteorology in the variability of ozone at different time scales has been investigated by using daily meteorological fields from the NCEP-NCAR meteorological reanalysis. In the five regions of central-southern Europe ozone extremes (exceedances of the summer 95th percentile) occur mostly under anticyclonic circulation or weak sea level pressure gradients which trigger elevated temperatures and the recirculation of air masses. In the four northern regions extremes are associated with high-latitude anticyclones that divert the typical westerly flow at those latitudes and cause the advection of aged air masses from the south. The impact of meteorology on the day-to-day variability of ozone has been assessed by means of two different types of multiple linear models. These include as predictors meteorological fields averaged within the regions (;region-based; approach) or synoptic indices indicating the degree of resemblance between the daily meteorological fields over a large domain (25°-70° N, 35° W - 35° E) and their corresponding composites for extreme ozone days (;index-based; approach). With the first approach, a reduced set of variables, always including daily maximum temperature within the region, explains 47-66% of the variability (adjusted R2) in central-southern Europe, while more complex models are needed to explain 27-49% of the variability in the northern regions. The index-based approach yields better results for the regions of northern Europe, with adjusted R2 = 40-57%. Finally, both methodologies have also been applied to reproduce the interannual variability of ozone, with the best models explaining 66-88% of the variance in central-southern Europe and 45-66% in the north. Thus, the regionalisation carried out in this work has allowed establishing clear distinctions between the meteorological drivers of ozone in northern Europe and in the rest of the continent. These drivers are consistent across the different time scales examined (extremes, day-to-day and interannual), which gives confidence in the robustness of the results.
Temporal Variability in Vertical Groundwater Fluxes and the Effect of Solar Radiation on Streambed Temperatures Based on Vertical High Resolution Distributed Temperature Sensing

NASA Astrophysics Data System (ADS)

Sebok, E.; Karan, S.; Engesgaard, P. K.; Duque, C.

2013-12-01

Due to its large spatial and temporal variability, groundwater discharge to streams is difficult to quantify. Methods using vertical streambed temperature profiles to estimate vertical fluxes are often of coarse vertical spatial resolution and neglect to account for the natural heterogeneity in thermal conductivity of streambed sediments. Here we report on a field investigation in a stream, where air, stream water and streambed sediment temperatures were measured by Distributed Temperature Sensing (DTS) with high spatial resolution to; (i) detect spatial and temporal variability in groundwater discharge based on vertical streambed temperature profiles, (ii) study the thermal regime of streambed sediments exposed to different solar radiation influence, (iii) describe the effect of solar radiation on the measured streambed temperatures. The study was carried out at a field site located along Holtum stream, in Western Denmark. The 3 m wide stream has a sandy streambed with a cobbled armour layer, a mean discharge of 200 l/s and a mean depth of 0.3 m. Streambed temperatures were measured with a high-resolution DTS system (HR-DTS). By helically wrapping the fiber optic cable around two PVC pipes of 0.05 m and 0.075 m outer diameter over 1.5 m length, temperature measurements were recorded with 5.7 mm and 3.8 mm vertical spacing, respectively. The HR-DTS systems were installed 0.7 m deep in the streambed sediments, crossing both the sediment-water and the water-air interface, thus yielding high resolution water and air temperature data as well. One of the HR-DTS systems was installed in the open stream channel with only topographical shading, while the other HR-DTS system was placed 7 m upstream, under the canopy of a tree, thus representing the shaded conditions with reduced influence of solar radiation. Temperature measurements were taken with 30 min intervals between 16 April and 25 June 2013. The thermal conductivity of streambed sediments was calibrated in a 1D flow and heat transport model (HydroGeoSphere). Subsequently, time series of vertical groundwater fluxes were computed based on the high-resolution vertical streambed sediment temperature profiles by coupling the model with PEST. The calculated vertical flux time series show spatial differences in discharge between the two HR-DTS sites. A similar temporal variability in vertical fluxes at the two test sites can also be observed, most likely linked to rainfall-runoff processes. The effect of solar radiation as streambed conduction is visible both at the exposed and shaded test site in form of increased diel temperature oscillations up to 14 cm depth from the streambed surface, with the test site exposed to solar radiation showing larger diel temperature oscillations.
Alpha-lipoic acid affects the oxidative stress in various brain structures in mice with methionine and choline deficiency.

PubMed

Veskovic, Milena; Mladenovic, Dusan; Jorgacevic, Bojan; Stevanovic, Ivana; de Luka, Silvio; Radosavljevic, Tatjana

2015-04-01

Deficiency in methionine or choline can induce oxidative stress in various organs such as liver, kidney, heart, and brain. This study was to examine the effects of alpha-lipoic acid (LA) on oxidative stress induced by methionine and choline deficiency (MCD) in several brain structures. Male mice C57BL/6 (n = 28) were divided into four groups: (1) control - continuously fed with standard chow; (2) LA - fed with standard chow and receiving LA; (3) MCD2 - fed with MCD diet for two weeks, and (4) MCD2+LA - fed with MCD diet for two weeks and receiving LA (100 mg/kg/day intraperitonealy [i.p.]). Brain tissue (cortex, hypothalamus, striatum and hippocampus) was taken for determination of oxidative stress parameters. MCD diet induced a significant increase in malondialdehyde and NOx concentration in all brain regions, while LA restored their content to normal values. Similar to this, in MCD2 group, activity of total SOD, MnSOD, and Cu/ZnSOD was reduced by MCD diet, while LA treatment improved their activities in all brain structures. Besides, in MCD2 group a decrease in catalase activity in cortex and GSH content in hypothalamus was evident, while LA treatment induced an increase in catalase activity in cortex and striatum and GSH content in hypothalamus. LA treatment can significantly reduce lipid peroxidation and nitrosative stress, caused by MCD diet, in all brain regions by restoring antioxidant enzymes activities, predominantly total SOD, MnSOD, and Cu/ZnSOD, and to a lesser extent by modulating catalase activity and GSH content. LA supplementation may be used in order to prevent brain oxidative injury induced by methionine and choline deficiency. © 2014 by the Society for Experimental Biology and Medicine.
On the Choice of Variable for Atmospheric Moisture Analysis

NASA Technical Reports Server (NTRS)

Dee, Dick P.; DaSilva, Arlindo M.; Atlas, Robert (Technical Monitor)

2002-01-01

The implications of using different control variables for the analysis of moisture observations in a global atmospheric data assimilation system are investigated. A moisture analysis based on either mixing ratio or specific humidity is prone to large extrapolation errors, due to the high variability in space and time of these parameters and to the difficulties in modeling their error covariances. Using the logarithm of specific humidity does not alleviate these problems, and has the further disadvantage that very dry background estimates cannot be effectively corrected by observations. Relative humidity is a better choice from a statistical point of view, because this field is spatially and temporally more coherent and error statistics are therefore easier to obtain. If, however, the analysis is designed to preserve relative humidity in the absence of moisture observations, then the analyzed specific humidity field depends entirely on analyzed temperature changes. If the model has a cool bias in the stratosphere this will lead to an unstable accumulation of excess moisture there. A pseudo-relative humidity can be defined by scaling the mixing ratio by the background saturation mixing ratio. A univariate pseudo-relative humidity analysis will preserve the specific humidity field in the absence of moisture observations. A pseudorelative humidity analysis is shown to be equivalent to a mixing ratio analysis with flow-dependent covariances. In the presence of multivariate (temperature-moisture) observations it produces analyzed relative humidity values that are nearly identical to those produced by a relative humidity analysis. Based on a time series analysis of radiosonde observed-minus-background differences it appears to be more justifiable to neglect specific humidity-temperature correlations (in a univariate pseudo-relative humidity analysis) than to neglect relative humidity-temperature correlations (in a univariate relative humidity analysis). A pseudo-relative humidity analysis is easily implemented in an existing moisture analysis system, by simply scaling observed-minus background moisture residuals prior to solving the analysis equation, and rescaling the analyzed increments afterward.

The influence of global sea surface temperature variability on the large-scale land surface temperature

NASA Astrophysics Data System (ADS)

Tyrrell, Nicholas L.; Dommenget, Dietmar; Frauen, Claudia; Wales, Scott; Rezny, Mike

2015-04-01

In global warming scenarios, global land surface temperatures () warm with greater amplitude than sea surface temperatures (SSTs), leading to a land/sea warming contrast even in equilibrium. Similarly, the interannual variability of is larger than the covariant interannual SST variability, leading to a land/sea contrast in natural variability. This work investigates the land/sea contrast in natural variability based on global observations, coupled general circulation model simulations and idealised atmospheric general circulation model simulations with different SST forcings. The land/sea temperature contrast in interannual variability is found to exist in observations and models to a varying extent in global, tropical and extra-tropical bands. There is agreement between models and observations in the tropics but not the extra-tropics. Causality in the land-sea relationship is explored with modelling experiments forced with prescribed SSTs, where an amplification of the imposed SST variability is seen over land. The amplification of to tropical SST anomalies is due to the enhanced upper level atmospheric warming that corresponds with tropical moist convection over oceans leading to upper level temperature variations that are larger in amplitude than the source SST anomalies. This mechanism is similar to that proposed for explaining the equilibrium global warming land/sea warming contrast. The link of the to the dominant mode of tropical and global interannual climate variability, the El Niño Southern Oscillation (ENSO), is found to be an indirect and delayed connection. ENSO SST variability affects the oceans outside the tropical Pacific, which in turn leads to a further, amplified and delayed response of.
Macrosomia has its roots in early placental development

PubMed Central

Schwartz, Nadav; Quant, Hayley S.; Sammel, Mary D.; PARRY, Samuel

2014-01-01

Introduction We sought to determine if early placental size, as measured by 3-dimensional ultrasonography, is associated with an increased risk of delivering a macrosomic or large-for-gestational age (LGA) infant. Methods We prospectively collected 3-dimensional ultrasound volume sets of singleton pregnancies at 11–14 weeks and 18–24 weeks. Birth weights were collected from the medical records. After delivery, the ultrasound volume set were used to measure the placental volume (PV) and placental quotient (PQ=PV/gestational age), as well as the mean placental and chorionic diameters (MPD and MCD, respectively). Placental measures were analyzed as predictors of macrosomia (birth weight ≥4000 grams) and LGA (birth weight ≥90th percentile). Results The 578 pregnancies with first trimester volumes included 44 (7.6%) macrosomic and 43 (7.4%) LGA infants. 373 subjects also had second trimester volumes available. A higher PV and PQ were both significantly associated with macrosomia and LGA in both the first and second trimesters. Second trimester MPD was significantly associated with both outcomes as well, while second trimester MCD was only associated with LGA. The above associations remained significant after adjusting for maternal demographic variables such as race, ethnicity, age and diabetes. Adjusted models yielded moderate prediction of macrosomia and LGA (AUC: 0.71–0.77). Conclusions Sonographic measurement of the early placenta can identify pregnancies at greater risk of macrosomia and LGA. Macrosomia and LGA are already determined in part by early placental growth and development. PMID:25064071
Predictors of seizure freedom after surgery for malformations of cortical development.

PubMed

Chang, Edward F; Wang, Doris D; Barkovich, A James; Tihan, Tarik; Auguste, Kurtis I; Sullivan, Joseph E; Garcia, Paul A; Barbaro, Nicholas M

2011-07-01

Malformations of cortical development (MCDs) are a major cause of medically refractory epilepsy. Our aim was to examine a surgical series of patients with cortical malformations to determine the prognostic factors associated with long-term seizure control. We conducted a retrospective review of 143 patients with MCD who underwent resective surgery for medically refractory epilepsy. Demographic, imaging, histopathologic, and surgical variables were analyzed for potential association with seizure freedom. Preoperative magnetic resonance imaging (MRI) was evaluated in a blind fashion and classified according to a new imaging/embryologic MCD classification system. Gray-white blurring on MRI, smaller lesions, complete resection of structural lesions, complete resection of abnormal electrocorticographic areas, and locally confined electrocorticographic abnormalities are favorable prognosticators of seizure freedom on univariate analysis. Imaging features consistent with abnormal proliferation (Barkovich class I) were associated with better outcome compared to those related to abnormal neuronal migration (class II) or abnormal cortical organization (class III). Multivariate logistic regression revealed complete resection of tissue manifesting electrocorticographic and/or MRI anatomic abnormalities as the main independent predictor of seizure freedom. Other histopathologic or demographic factors were not associated with seizure control. Long-term follow-up of patients demonstrated sustained overall rates of seizure control (72% at 2 years, 65% at 5 years, and 67% at 10 years). Surgery for MCDs can result in high rates of seizure freedom. Complete resection of electrocorticographic and anatomic abnormalities appears to be most predictive of long-term seizure control. Copyright © 2011 American Neurological Association.
Comparative differential proteomic analysis of minimal change disease and focal segmental glomerulosclerosis.

PubMed

Pérez, Vanessa; López, Dolores; Boixadera, Ester; Ibernón, Meritxell; Espinal, Anna; Bonet, Josep; Romero, Ramón

2017-02-03

Minimal change disease (MCD) and primary focal segmental glomerulosclerosis (FSGS) are glomerular diseases characterized by nephrotic syndrome. Their diagnosis requires a renal biopsy, but it is an invasive procedure with potential complications. In a small biopsy sample, where only normal glomeruli are observed, FSGS cannot be differentiated from MCD. The correct diagnosis is crucial to an effective treatment, as MCD is normally responsive to steroid therapy, whereas FSGS is usually resistant. The purpose of our study was to discover and validate novel early urinary biomarkers capable to differentiate between MCD and FSGS. Forty-nine patients biopsy-diagnosed of MCD and primary FSGS were randomly subdivided into a training set (10 MCD, 11 FSGS) and a validation set (14 MCD, 14 FSGS). The urinary proteome of the training set was analyzed by two-dimensional differential gel electrophoresis coupled with mass spectrometry. The proteins identified were quantified by enzyme-linked immunosorbent assay in urine samples from the validation set. Urinary concentration of alpha-1 antitrypsin, transferrin, histatin-3 and 39S ribosomal protein L17 was decreased and calretinin was increased in FSGS compared to MCD. These proteins were used to build a decision tree capable to predict patient's pathology. This preliminary study suggests a group of urinary proteins as possible non-invasive biomarkers with potential value in the differential diagnosis of MCD and FSGS. These biomarkers would reduce the number of misdiagnoses, avoiding unnecessary or inadequate treatments.
Evaluation of moral case deliberation at the Dutch Health Care Inspectorate: a pilot study.

PubMed

Seekles, Wike; Widdershoven, Guy; Robben, Paul; van Dalfsen, Gonny; Molewijk, Bert

2016-05-21

Moral case deliberation (MCD) as a form of clinical ethics support is usually implemented in health care institutions and educational programs. While there is no previous research on the use of clinical ethics support on the level of health care regulation, employees of regulatory bodies are regularly confronted with moral challenges. This pilot study describes and evaluates the use of MCD at the Dutch Health Care Inspectorate (IGZ). The objective of this pilot study is to investigate: 1) the current way of dealing with moral issues at the IGZ; 2) experience with and evaluation of MCD as clinical ethics support, and 3) future preferences and (perceived) needs regarding clinical ethics support for dealing with moral questions at the IGZ. We performed an explorative pilot study. The research questions were assessed by means of: 1) interviews with MCD participants during four focus groups; and 2) interviews with six key stakeholders at the IGZ. De qualitative data is illustrated by data from questionnaires on MCD outcomes, perspective taking and MCD evaluation. Professionals do not always recognize moral issues. Employees report a need for regular and structured moral support in health care regulation. The MCD meetings are evaluated positively. The most important outcomes of MCD are feeling secure and learning from others. Additional support is needed to successfully implement MCD at the Inspectorate. We conclude that the respondents perceive moral case deliberation as a useful form of clinical ethics support for dealing with moral questions and issues in health care regulation.
Temporal changes in climatic variables and their impact on crop yields in southwestern China

NASA Astrophysics Data System (ADS)

Liu, Hong-Bin; Gou, Yu; Wang, Hong-Ye; Li, Hong-Mei; Wu, Wei

2014-08-01

Knowledge of variability in climatic variables changes and its impact on crop yields is important for farmers and policy makers, especially in southwestern China where rainfed agriculture is dominant. In the current study, six climatic parameters (mean temperature, rainfall, relative humidity, sunshine hours, temperature difference, and rainy days) and aggregated yields of three main crops (rice: Oryza sativa L., oilseed rape: Brassica napus L., and tobacco: Nicotiana tabacum L.) during 1985-2010 were collected and analyzed for Chongqing—a large agricultural municipality of China. Climatic variables changes were detected by Mann-Kendall test. Increased mean temperature and temperature difference and decreased relative humidity were found in annual and oilseed rape growth time series ( P < 0.05). Increased sunshine hours were observed during the oilseed rape growth period ( P < 0.05). Rainy days decreased slightly in annual and oilseed rape growth time series ( P < 0.10). Correlation analysis showed that yields of all three crops could benefit from changes in climatic variables in this region. Yield of rice increased with rainfall ( P < 0.10). Yield of oilseed rape increased with mean temperature and temperature difference but decreased with relative humidity ( P < 0.01). Tobacco yield increased with mean temperature ( P < 0.05). Path analysis provided additional information about the importance and contribution paths of climatic variables to crop yields. Temperature difference and sunshine hours had higher direct and indirect effects via other climatic variables on yields of rice and tobacco. Mean temperature, relative humidity, rainy days, and temperature difference had higher direct and indirect effects via others on yield of oilseed rape.
Temporal changes in climatic variables and their impact on crop yields in southwestern China.

PubMed

Liu, Hong-Bin; Gou, Yu; Wang, Hong-Ye; Li, Hong-Mei; Wu, Wei

2014-08-01

Knowledge of variability in climatic variables changes and its impact on crop yields is important for farmers and policy makers, especially in southwestern China where rainfed agriculture is dominant. In the current study, six climatic parameters (mean temperature, rainfall, relative humidity, sunshine hours, temperature difference, and rainy days) and aggregated yields of three main crops (rice: Oryza sativa L., oilseed rape: Brassica napus L., and tobacco: Nicotiana tabacum L.) during 1985-2010 were collected and analyzed for Chongqing-a large agricultural municipality of China. Climatic variables changes were detected by Mann-Kendall test. Increased mean temperature and temperature difference and decreased relative humidity were found in annual and oilseed rape growth time series (P<0.05). Increased sunshine hours were observed during the oilseed rape growth period (P<0.05). Rainy days decreased slightly in annual and oilseed rape growth time series (P<0.10). Correlation analysis showed that yields of all three crops could benefit from changes in climatic variables in this region. Yield of rice increased with rainfall (P<0.10). Yield of oilseed rape increased with mean temperature and temperature difference but decreased with relative humidity (P<0.01). Tobacco yield increased with mean temperature (P<0.05). Path analysis provided additional information about the importance and contribution paths of climatic variables to crop yields. Temperature difference and sunshine hours had higher direct and indirect effects via other climatic variables on yields of rice and tobacco. Mean temperature, relative humidity, rainy days, and temperature difference had higher direct and indirect effects via others on yield of oilseed rape.
Validation of China-wide interpolated daily climate variables from 1960 to 2011

NASA Astrophysics Data System (ADS)

Yuan, Wenping; Xu, Bing; Chen, Zhuoqi; Xia, Jiangzhou; Xu, Wenfang; Chen, Yang; Wu, Xiaoxu; Fu, Yang

2015-02-01

Temporally and spatially continuous meteorological variables are increasingly in demand to support many different types of applications related to climate studies. Using measurements from 600 climate stations, a thin-plate spline method was applied to generate daily gridded climate datasets for mean air temperature, maximum temperature, minimum temperature, relative humidity, sunshine duration, wind speed, atmospheric pressure, and precipitation over China for the period 1961-2011. A comprehensive evaluation of interpolated climate was conducted at 150 independent validation sites. The results showed superior performance for most of the estimated variables. Except for wind speed, determination coefficients ( R 2) varied from 0.65 to 0.90, and interpolations showed high consistency with observations. Most of the estimated climate variables showed relatively consistent accuracy among all seasons according to the root mean square error, R 2, and relative predictive error. The interpolated data correctly predicted the occurrence of daily precipitation at validation sites with an accuracy of 83 %. Moreover, the interpolation data successfully explained the interannual variability trend for the eight meteorological variables at most validation sites. Consistent interannual variability trends were observed at 66-95 % of the sites for the eight meteorological variables. Accuracy in distinguishing extreme weather events differed substantially among the meteorological variables. The interpolated data identified extreme events for the three temperature variables, relative humidity, and sunshine duration with an accuracy ranging from 63 to 77 %. However, for wind speed, air pressure, and precipitation, the interpolation model correctly identified only 41, 48, and 58 % of extreme events, respectively. The validation indicates that the interpolations can be applied with high confidence for the three temperatures variables, as well as relative humidity and sunshine duration based on the performance of these variables in estimating daily variations, interannual variability, and extreme events. Although longitude, latitude, and elevation data are included in the model, additional information, such as topography and cloud cover, should be integrated into the interpolation algorithm to improve performance in estimating wind speed, atmospheric pressure, and precipitation.
Magnetic hard gap due to bound magnetic polarons in the localized regime.

PubMed

Rimal, Gaurab; Tang, Jinke

2017-02-08

We investigate the low temperature electron transport properties of manganese doped lead sulfide films. The system shows variable range hopping at low temperatures that crosses over into an activation regime at even lower temperatures. This crossover is destroyed by an applied magnetic field which suggests a magnetic origin of the hard gap, associated with bound magnetic polarons. Even though the gap forms around the superconducting transition temperature of lead, we do not find evidence of this being due to insulator-superconductor transition. Comparison with undoped PbS films, which do not show the activated transport behavior, suggests that bound magnetic polarons create the hard gap in the system that can be closed by magnetic fields.
Characterizing Uncertainty In Electrical Resistivity Tomography Images Due To Subzero Temperature Variability

NASA Astrophysics Data System (ADS)

Herring, T.; Cey, E. E.; Pidlisecky, A.

2017-12-01

Time-lapse electrical resistivity tomography (ERT) is used to image changes in subsurface electrical conductivity (EC), e.g. due to a saline contaminant plume. Temperature variation also produces an EC response, which interferes with the signal of interest. Temperature compensation requires the temperature distribution and the relationship between EC and temperature, but this relationship at subzero temperatures is not well defined. The goal of this study is to examine how uncertainty in the subzero EC/temperature relationship manifests in temperature corrected ERT images, especially with respect to relevant plume parameters (location, contaminant mass, etc.). First, a lab experiment was performed to determine the EC of fine-grained glass beads over a range of temperatures (-20° to 20° C) and saturations. The measured EC/temperature relationship was then used to add temperature effects to a hypothetical EC model of a conductive plume. Forward simulations yielded synthetic field data to which temperature corrections were applied. Varying the temperature/EC relationship used in the temperature correction and comparing the temperature corrected ERT results to the synthetic model enabled a quantitative analysis of the error of plume parameters associated with temperature variability. Modeling possible scenarios in this way helps to establish the feasibility of different time-lapse ERT applications by quantifying the uncertainty associated with parameter(s) of interest.
Tropical cloud feedbacks and natural variability of climate

NASA Technical Reports Server (NTRS)

Miller, R. L.; Del Genio, A. D.

1994-01-01

Simulations of natural variability by two general circulation models (GCMs) are examined. One GCM is a sector model, allowing relatively rapid integration without simplification of the model physics, which would potentially exclude mechanisms of variability. Two mechanisms are found in which tropical surface temperature and sea surface temperature (SST) vary on interannual and longer timescales. Both are related to changes in cloud cover that modulate SST through the surface radiative flux. Over the equatorial ocean, SST and surface temperature vary on an interannual timescale, which is determined by the magnitude of the associated cloud cover anomalies. Over the subtropical ocean, variations in low cloud cover drive SST variations. In the sector model, the variability has no preferred timescale, but instead is characterized by a 'red' spectrum with increasing power at longer periods. In the terrestrial GCM, SST variability associated with low cloud anomalies has a decadal timescale and is the dominant form of global temperature variability. Both GCMs are coupled to a mixed layer ocean model, where dynamical heat transports are prescribed, thus filtering out El Nino-Southern Oscillation (ENSO) and thermohaline circulation variability. The occurrence of variability in the absence of dynamical ocean feedbacks suggests that climatic variability on long timescales can arise from atmospheric processes alone.
Forecast of Antarctic Sea Ice and Meteorological Fields

NASA Astrophysics Data System (ADS)

Barreira, S.; Orquera, F.

2017-12-01

Since 2001, we have been forecasting the climatic fields of the Antarctic sea ice (SI) and surface air temperature, surface pressure and precipitation anomalies for the Southern Hemisphere at the Meteorological Department of the Argentine Naval Hydrographic Service with different techniques that have evolved with the years. Forecast is based on the results of Principal Components Analysis applied to SI series (S-Mode) that gives patterns of temporal series with validity areas (these series are important to determine which areas in Antarctica will have positive or negative SI anomalies based on what happen in the atmosphere) and, on the other hand, to SI fields (T-Mode) that give us the form of the SI fields anomalies based on a classification of 16 patterns. Each T-Mode pattern has unique atmospheric fields associated to them. Therefore, it is possible to forecast whichever atmosphere variable we decide for the Southern Hemisphere. When the forecast is obtained, each pattern has a probability of occurrence and sometimes it is necessary to compose more than one of them to obtain the final result. S-Mode and T-Mode are monthly updated with new data, for that reason the forecasts improved with the increase of cases since 2001. We used the Monthly Polar Gridded Sea Ice Concentrations database derived from satellite information generated by NASA Team algorithm provided monthly by the National Snow and Ice Data Center of USA that begins in November 1978. Recently, we have been experimenting with multilayer Perceptron (neuronal network) with supervised learning and a back-propagation algorithm to improve the forecast. The Perceptron is the most common Artificial Neural Network topology dedicated to image pattern recognition. It was implemented through the use of temperature and pressure anomalies field images that were associated with a the different sea ice anomaly patterns. The variables analyzed included only composites of surface air temperature and pressure anomalies to simplify the density of input data and avoid a non-converging solution. Sea ice and atmospheric variables forecast can be checked every month at our web page http://www.hidro.gob.ar/smara/sb/sb.asp and at World Meteorological web page (Global Cryosphere Watch) http://globalcryospherewatch.org/state_of_cryo/seaice/.
Glacier variability in the conterminous United States during the twentieth century

USGS Publications Warehouse

McCabe, Gregory J.; Fountain, Andrew G.

2013-01-01

Glaciers of the conterminous United States have been receding for the past century. Since 1900 the recession has varied from a 24 % loss in area (Mt. Rainier, Washington) to a 66 % loss in the Lewis Range of Montana. The rates of retreat are generally similar with a rapid loss in the early decades of the 20th century, slowing in the 1950s–1970s, and a resumption of rapid retreat starting in the 1990s. Decadal estimates of changes in glacier area for a subset of 31 glaciers from 1900 to 2000 are used to test a snow water equivalent model that is subsequently employed to examine the effects of temperature and precipitation variability on annual glacier area changes for these glaciers. Model results indicate that both winter precipitation and winter temperature have been important climatic factors affecting the variability of glacier variability during the 20th Century. Most of the glaciers analyzed appear to be more sensitive to temperature variability than to precipitation variability. However, precipitation variability is important, especially for high elevation glaciers. Additionally, glaciers with areas greater than 1 km2 are highly sensitive to variability in temperature.
Simultaneous assessment of autonomic function and anxiety-related behavior in BALB/c and C57BL/6 mice.

PubMed

Depino, Amaicha Mara; Gross, Cornelius

2007-02-27

In humans, anxiety is accompanied by changes in autonomic nervous system function, including increased heart rate, body temperature, and blood pressure, and decreased heart rate variability. In rodents, anxiety is inferred by examining anxiety-related behavioral responses such as avoidance and freezing, and more infrequently by assessing autonomic responses to anxiogenic stimuli. However, few studies have simultaneously measured behavioral and autonomic responses to aversive stimuli in rodents and it remains unclear whether autonomic measures are reliable correlates of anxiety-related behavior in these animal models. Here we recorded for the first time heart rate and body temperature in freely moving BALB/c and C57BL/6 mice during exposure to an unfamiliar environment. Our data show that upon exposure to a novel open field, BALB/c mice showed increased anxiety-related behavior, reduced heart rate and higher heart rate variability (HRV) when compared with C57BL/6 mice. Regression analysis revealed a significant correlation between both heart rate and long-term HRV measures and locomotor activity and time spent in the center of the open field, but no correlation between body temperature and any behavioral variables. In the free exploration test, in which animals were allowed direct access to a novel environment from a familiar environment without experimenter handling, significant correlations were found only between heart rate and total locomotor activity, but not time spent in the unfamiliar chamber despite increased anxiety-related behavior in BALB/c mice. These findings demonstrate that increased anxiety-related behavior in BALB/c mice is not associated with specific changes in heart rate, HRV, or body temperature.
Reduction of mosquito biting-pressure: spatial repellents or mosquito traps? A field comparison of seven commercially available products in Israel

USDA-ARS?s Scientific Manuscript database

The personal protection capability of seven commercially available mosquito control devices (MCD) is compared under field conditions in Israel. Trials were performed in a high biting-pressure area inhabited by large populations of mosquito and biting midge species and using human volunteers for lan...
Dynamic control of remelting processes

DOEpatents

Bertram, Lee A.; Williamson, Rodney L.; Melgaard, David K.; Beaman, Joseph J.; Evans, David G.

2000-01-01

An apparatus and method of controlling a remelting process by providing measured process variable values to a process controller; estimating process variable values using a process model of a remelting process; and outputting estimated process variable values from the process controller. Feedback and feedforward control devices receive the estimated process variable values and adjust inputs to the remelting process. Electrode weight, electrode mass, electrode gap, process current, process voltage, electrode position, electrode temperature, electrode thermal boundary layer thickness, electrode velocity, electrode acceleration, slag temperature, melting efficiency, cooling water temperature, cooling water flow rate, crucible temperature profile, slag skin temperature, and/or drip short events are employed, as are parameters representing physical constraints of electroslag remelting or vacuum arc remelting, as applicable.
New thermodynamics of entropy generation minimization with nonlinear thermal radiation and nanomaterials

NASA Astrophysics Data System (ADS)

Hayat, T.; Khan, M. Ijaz; Qayyum, Sumaira; Alsaedi, A.; Khan, M. Imran

2018-03-01

This research addressed entropy generation for MHD stagnation point flow of viscous nanofluid over a stretching surface. Characteristics of heat transport are analyzed through nonlinear radiation and heat generation/absorption. Nanoliquid features for Brownian moment and thermophoresis have been considered. Fluid in the presence of constant applied inclined magnetic field is considered. Flow problem is mathematically modeled and governing expressions are changed into nonlinear ordinary ones by utilizing appropriate transformations. The effects of pertinent variables on velocity, nanoparticle concentration and temperature are discussed graphically. Furthermore Brownian motion and thermophoresis effects on entropy generation and Bejan number have been examined. Total entropy generation is inspected through various flow variables. Consideration is mainly given to the convergence process. Velocity, temperature and mass gradients at the surface of sheet are calculated numerically.
Probing Gas Adsorption in Zeolites by Variable-Temperature IR Spectroscopy: An Overview of Current Research.

PubMed

Garrone, Edoardo; Delgado, Montserrat R; Bonelli, Barbara; Arean, Carlos O

2017-09-15

The current state of the art in the application of variable-temperature IR (VTIR) spectroscopy to the study of (i) adsorption sites in zeolites, including dual cation sites; (ii) the structure of adsorption complexes and (iii) gas-solid interaction energy is reviewed. The main focus is placed on the potential use of zeolites for gas separation, purification and transport, but possible extension to the field of heterogeneous catalysis is also envisaged. A critical comparison with classical IR spectroscopy and adsorption calorimetry shows that the main merits of VTIR spectroscopy are (i) its ability to provide simultaneously the spectroscopic signature of the adsorption complex and the standard enthalpy change involved in the adsorption process; and (ii) the enhanced potential of VTIR to be site specific in favorable cases.
Application of the Ecosystem Assessment Model to Lake Norman: A cooling lake in North Carolina: Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Porcella, D.B.; Bowie, G.L.; Campbell, C.L.

The Ecosystem Assessment Model (EAM) of the Cooling Lake Assessment Methodology was applied to the extensive ecological field data collected at Lake Norman, North Carolina by Duke Power Company to evaluate its capability to simulate lake ecosystems and the ecological effects of steam electric power plants. The EAM provided simulations over a five-year verification period that behaved as expected based on a one-year calibration. Major state variables of interest to utilities and regulatory agencies are: temperature, dissolved oxygen, and fish community variables. In qualitative terms, temperature simulation was very accurate, dissolved oxygen simulation was accurate, and fish prediction was reasonablymore » accurate. The need for more accurate fisheries data collected at monthly intervals and non-destructive sampling techniques was identified.« less
Temperature Variability Associated with the Middle Atmosphere Electrodynamics (MAE-1) Campaign

NASA Technical Reports Server (NTRS)

Schmidlin, F. J.

1999-01-01

Meteorological rockets launched during the Middle Atmosphere Electrodynamics (MAE-1) Campaign in October 1980 from Andoya Rocket Range (ARR), Norway, exhibited large and unexpected temperature variability. Temperatures were found to vary as much as 20 C within a few hours and demonstrated a similar type of variability from one day to the next. Following examination of the reduced rocketsonde profiles the question was raised whether the observed variability was due to natural atmospheric variability or instrument malfunction. Small-scale variability, as observed, may result from one or multiple sources, e.g., intense storms upstream from the observing site, orography such as mountain waves off of the Greenland Plateau, convective activity, gravity waves, etc. Arranging the observations spaced over time showed that the perturbations moved downward. Prior to MAE-1 very few small rocketsonde measurements had been launched from ARR, thus the quality of the initial measurements in early October caused concern when the large variability was noted. We discuss the errors of the rocketsonde measurements, graphically review the nature of the variability observed, compare the data with other measurements, and postulate a possible cause for the variability.

Morphometric variability of Arctodiaptomus salinus (Copepoda) in the Mediterranean-Black Sea region.

PubMed

Anufriieva, Elena V; Shadrin, Nickolai V

2015-11-18

Inter-species variability in morphological traits creates a need to know the range of variability of characteristics in the species for taxonomic and ecological tasks. Copepoda Arctodiaptomus salinus, which inhabits water bodies across Eurasia and North Africa, plays a dominant role in plankton of different water bodies-from fresh to hypersaline. This work assesses the intra- and inter-population morphometric variability of A. salinus in the Mediterranean-Black Sea region and discusses some observed regularities. The variability of linear body parameters and proportions was studied. The impacts of salinity, temperature, and population density on morphological characteristics and their variability can manifest themselves in different ways at the intra- and inter-population levels. A significant effect of salinity, pH and temperature on the body proportions was not found. Their intra-population variability is dependent on temperature and salinity. Sexual dimorphism of A. salinus manifests in different linear parameters, proportions, and their variability. There were no effects of temperature, pH and salinity on the female/male parameter ratio. There were significant differences in the body proportions of males and females in different populations. The influence of temperature, salinity, and population density can be attributed to 80%-90% of intra-population variability of A. salinus. However, these factors can explain less than 40% of inter-population differences. Significant differences in the body proportions of males and females from different populations may suggest that some local populations of A. salinus in the Mediterranean-Black Sea region are in the initial stages of differentiation.
Polynomial response of 2,4-D mineralization to temperature in soils at varying soil moisture contents, slope positions and depths.

PubMed

Shymko, Janna L; Farenhorst, Annemieke; Zvomuya, Francis

2011-01-01

The herbicide 2,4-D [2,4-(dichlorophenoxy) acetic acid] is a widely used broadleaf control agent in cereal production systems. Although 2,4-D soil-residual activity (half-lives) are typically less than 10 days, this herbicide also has as a short-term leaching potential due to its relatively weak retention by soil constituents. Herbicide residual effects and leaching are influenced by environmental variables such as soil moisture and temperature. The objective of this study was to determine impacts of these environmental variables on the magnitude and extent of 2,4-D mineralization in a cultivated undulating Manitoba prairie landscape. Microcosm incubation experiments were utilized to assess 2,4-D half-lives and total mineralization using a 4 × 4 × 3 × 2 factorial design (with soil temperature at 4 levels: 5, 10, 20 and 40°C; soil moisture at 4 levels: 60, 85, 110, 135 % of field capacity; slope position at 3 levels: upper-, mid- and lower-slopes; and soil depth at 2 levels: 0-5 cm and 5-15 cm). Half-lives (t(½)) varied from 3 days to 51 days with the total 2,4-D mineralization (M(T)) ranging from 5.8 to 50.9 %. The four-way interaction (temperature × moisture × slope × depth) significantly (p < 0.001) influenced both t(½) and M(T). Second-order polynomial equations best described the relations of temperature with t(½) and M(T) as was expected from a biological system. However, the interaction and variability of t(½) and M(T) among different temperatures, soil moistures, slope positions, and soil depth combinations indicates that the complex nature of these interacting factors should be considered when applying 2,4-D in agricultural fields and in utilizing these parameters in pesticide fate models.
Climate models predict increasing temperature variability in poor countries.

PubMed

Bathiany, Sebastian; Dakos, Vasilis; Scheffer, Marten; Lenton, Timothy M

2018-05-01

Extreme events such as heat waves are among the most challenging aspects of climate change for societies. We show that climate models consistently project increases in temperature variability in tropical countries over the coming decades, with the Amazon as a particular hotspot of concern. During the season with maximum insolation, temperature variability increases by ~15% per degree of global warming in Amazonia and Southern Africa and by up to 10%°C -1 in the Sahel, India, and Southeast Asia. Mechanisms include drying soils and shifts in atmospheric structure. Outside the tropics, temperature variability is projected to decrease on average because of a reduced meridional temperature gradient and sea-ice loss. The countries that have contributed least to climate change, and are most vulnerable to extreme events, are projected to experience the strongest increase in variability. These changes would therefore amplify the inequality associated with the impacts of a changing climate.
Climate models predict increasing temperature variability in poor countries

PubMed Central

Dakos, Vasilis; Scheffer, Marten

2018-01-01

Extreme events such as heat waves are among the most challenging aspects of climate change for societies. We show that climate models consistently project increases in temperature variability in tropical countries over the coming decades, with the Amazon as a particular hotspot of concern. During the season with maximum insolation, temperature variability increases by ~15% per degree of global warming in Amazonia and Southern Africa and by up to 10%°C−1 in the Sahel, India, and Southeast Asia. Mechanisms include drying soils and shifts in atmospheric structure. Outside the tropics, temperature variability is projected to decrease on average because of a reduced meridional temperature gradient and sea-ice loss. The countries that have contributed least to climate change, and are most vulnerable to extreme events, are projected to experience the strongest increase in variability. These changes would therefore amplify the inequality associated with the impacts of a changing climate. PMID:29732409
DOE Office of Scientific and Technical Information (OSTI.GOV)

Hammond, Glenn Edward; Yang, Xiaofan; Song, Xuehang

The groundwater-surface water interaction zone (GSIZ) plays an important role in riverine and watershed ecosystems as the exchange of waters of variable composition and temperature (hydrologic exchange flows) stimulate microbial activity and associated biogeochemical reactions. Variable temporal and spatial scales of hydrologic exchange flows, heterogeneity of the subsurface environment, and complexity of biogeochemical reaction networks in the GSIZ present challenges to incorporation of fundamental process representations and model parameterization across a range of spatial scales (e.g. from pore-scale to field scale). This paper presents a novel hybrid multiscale simulation approach that couples hydrologic-biogeochemical (HBGC) processes between two distinct length scalesmore » of interest.« less
Identifying, characterizing and predicting spatial patterns of lacustrine groundwater discharge

NASA Astrophysics Data System (ADS)

Tecklenburg, Christina; Blume, Theresa

2017-10-01

Lacustrine groundwater discharge (LGD) can significantly affect lake water balances and lake water quality. However, quantifying LGD and its spatial patterns is challenging because of the large spatial extent of the aquifer-lake interface and pronounced spatial variability. This is the first experimental study to specifically study these larger-scale patterns with sufficient spatial resolution to systematically investigate how landscape and local characteristics affect the spatial variability in LGD. We measured vertical temperature profiles around a 0.49 km2 lake in northeastern Germany with a needle thermistor, which has the advantage of allowing for rapid (manual) measurements and thus, when used in a survey, high spatial coverage and resolution. Groundwater inflow rates were then estimated using the heat transport equation. These near-shore temperature profiles were complemented with sediment temperature measurements with a fibre-optic cable along six transects from shoreline to shoreline and radon measurements of lake water samples to qualitatively identify LGD patterns in the offshore part of the lake. As the hydrogeology of the catchment is sufficiently homogeneous (sandy sediments of a glacial outwash plain; no bedrock control) to avoid patterns being dominated by geological discontinuities, we were able to test the common assumptions that spatial patterns of LGD are mainly controlled by sediment characteristics and the groundwater flow field. We also tested the assumption that topographic gradients can be used as a proxy for gradients of the groundwater flow field. Thanks to the extensive data set, these tests could be carried out in a nested design, considering both small- and large-scale variability in LGD. We found that LGD was concentrated in the near-shore area, but alongshore variability was high, with specific regions of higher rates and higher spatial variability. Median inflow rates were 44 L m-2 d-1 with maximum rates in certain locations going up to 169 L m-2 d-1. Offshore LGD was negligible except for two local hotspots on steep steps in the lake bed topography. Large-scale groundwater inflow patterns were correlated with topography and the groundwater flow field, whereas small-scale patterns correlated with grain size distributions of the lake sediment. These findings confirm results and assumptions of theoretical and modelling studies more systematically than was previously possible with coarser sampling designs. However, we also found that a significant fraction of the variance in LGD could not be explained by these controls alone and that additional processes need to be considered. While regression models using these controls as explanatory variables had limited power to predict LGD rates, the results nevertheless encourage the use of topographic indices and sediment heterogeneity as an aid for targeted campaigns in future studies of groundwater discharge to lakes.
Variable Stars in the Field of TrES-3b (Abstract)

NASA Astrophysics Data System (ADS)

Aadland, E.

2018-06-01

(Abstract only) The star field around the exoplanet TrES-3b has potential for finding unknown variable stars. The field was observed over several nights using Minnesota State University MoorheadÃs Feder Observatory. A light curve for each star was created and are being evaluated for variability and periodicity. A python program is in development to help complete the analysis by automating some of the process. Several stars in the field appear to be variable and are being further analyzed to determine a period and to classify the type of variable.
Thermo-Elastic Triangular Sandwich Element for the Complete Stress Field Based on a Single-Layer Theory

NASA Technical Reports Server (NTRS)

Das, M.; Barut, A.; Madenci, E.; Ambur, D. R.

2004-01-01

This study presents a new triangular finite element for modeling thick sandwich panels, subjected to thermo-mechanical loading, based on a {3,2}-order single-layer plate theory. A hybrid energy functional is employed in the derivation of the element because of a C interelement continuity requirement. The single-layer theory is based on five weighted-average field variables arising from the cubic and quadratic representations of the in-plane and transverse displacement fields, respectively. The variations of temperature and distributed loading acting on the top and bottom surfaces are non-uniform. The temperature varies linearly through the thickness.
Development of a multispectral sensor for crop canopy temperature measurement

USDA-ARS?s Scientific Manuscript database

Quantifying spatial and temporal variability in plant stress has precision agriculture applications in controlling variable rate irrigation and variable rate nutrient application. One approach to plant stress detection is crop canopy temperature measurement by the use of thermographic or radiometric...
Combining NLCD and MODIS to create a land cover-albedo database for the continental United States

USGS Publications Warehouse

Wickham, J.; Barnes, Christopher A.; Nash, M.S.; Wade, T.G.

2015-01-01

Land surface albedo is an essential climate variable that is tightly linked to land cover, such that specific land cover classes (e.g., deciduous broadleaf forest, cropland) have characteristic albedos. Despite the normative of land-cover class specific albedos, there is considerable variability in albedo within a land cover class. The National Land Cover Database (NLCD) and the Moderate Resolution Imaging Spectroradiometer (MODIS) albedo product were combined to produce a long-term (14 years) integrated land cover-albedo database for the continental United States that can be used to examine the temporal behavior of albedo as a function of land cover. The integration identifies areas of homogeneous land cover at the nominal spatial resolution of the MODIS (MCD43A) albedo product (500 m × 500 m) from the NLCD product (30 m × 30 m), and provides an albedo data record per 500 m × 500 m pixel for 14 of the 16 NLCD land cover classes. Individual homogeneous land cover pixels have up to 605 albedo observations, and 75% of the pixels have at least 319 MODIS albedo observations (≥ 50% of the maximum possible number of observations) for the study period (2000–2013). We demonstrated the utility of the database by conducting a multivariate analysis of variance of albedo for each NLCD land cover class, showing that locational (pixel-to-pixel) and inter-annual variability were significant factors in addition to expected seasonal (intra-annual) and geographic (latitudinal) effects.
ENGINEERING APPLICATIONS OF ANALOG COMPUTERS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bryant, L.T.; Janicke, M.J.; Just, L.C.

1961-02-01

Six examples are given of the application of analog computers in the fields of reactor engineering, heat transfer, and dynamics: deceleration of a reactor control rod by dashpot, pressure variations through a packed bed, reactor kinetics over many decades with thermal feedback (simulation of a TREAT transient), vibrating system with two degrees of freedom, temperature distribution in a radiating fin, and temperature distribution in an irfinite slab with variable thermal properties. (D.L.C.)
Field Metabolic Rate Is Dependent on Time-Activity Budget in Ring-Billed Gulls (Larus delawarensis) Breeding in an Anthropogenic Environment.

PubMed

Marteinson, Sarah C; Giroux, Jean-François; Hélie, Jean-François; Gentes, Marie-Line; Verreault, Jonathan

2015-01-01

Environmental and behavioral factors have long been assumed to affect variation in avian field metabolic rate (FMR). However, due to the difficulties in measuring continuous behavior of birds over prolonged periods of time, complete time-activity budgets have rarely been examined in relation to FMR. Our objective was to determine the effect of activity (measured by detailed time-activity budgets) and a series of extrinsic and intrinsic factors on FMR of the omnivorous ring-billed gull (Larus delawarensis). The experiment was conducted during the incubation period when both members of the pair alternate between attending the nest-site and leaving the colony to forage in aquatic and anthropogenic environments (city, agricultural). FMR was determined using the doubly labeled water method. Time-activity budgets were extrapolated from spatio-temporal data (2-5 days) obtained from bird-borne GPS data loggers. Gulls had low FMRs compared to those predicted by allometric equations based on recorded FMRs from several seabird species. Gulls proportioned their time mainly to nest-site attendance (71% of total tracking time), which reduced FMR/g body mass, and was the best variable explaining energy expenditure. The next best variable was the duration of foraging trips, which increased FMR/g; FMR/g was also elevated by the proportion of time spent foraging or flying (17% and 8% of tracking time respectively). Most environmental variables measured did not impact FMR/g, however, the percent of time birds were subjected to temperatures below their lower critical temperature increased FMR. Time-activity budgets varied between the sexes, and with temperature and capture date suggesting that these variables indirectly affected FMR/g. The gulls foraged preferentially in anthropogenic-related habitats, which may have contributed to their low FMR/g due to the high availability of protein- and lipid-rich foods. This study demonstrates that activities were the best predictors of FMR/g in ring-billed gulls, thus providing strong support for this long-standing theory in bioenergetics.
Analysis and design of ferroelectric-based smart antenna structures

NASA Astrophysics Data System (ADS)

Ramesh, Prashanth; Washington, Gregory N.

2009-03-01

Ferroelectrics in microwave antenna systems offer benefits of electronic tunability, compact size and light weight, speed of operation, high power-handling, low dc power consumption, and potential for low loss and cost. Ferroelectrics allow for the tuning of microwave devices by virtue of the nonlinear dependence of their dielectric permittivity on an applied electric field. Experiments on the field-polarization dependence of ferroelectric thin films show variation in dielectric permittivity of up to 50%. This is in contrast to the conventional dielectric materials used in electrical devices which have a relatively constant permittivity, indicative of the linear field-polarization curve. Ferroelectrics, with their variable dielectric constant introduce greater flexibility in correction and control of beam shapes and beam direction of antenna structures. The motivation behind this research is applying ferroelectrics to mechanical load bearing antenna structures, but in order to develop such structures, we need to understand not just the field-permittivity dependence, but also the coupled electro-thermo-mechanical behavior of ferroelectrics. In this paper, two models are discussed: a nonlinear phenomenological model relating the applied fields, strains and temperature to the dielectric permittivity based on the Devonshire thermodynamic framework, and a phenomenological model relating applied fields and temperature to the dielectric loss tangent. The models attempt to integrate the observed field-permittivity, strain-permittivity and temperature-permittivity behavior into one single unified model and extend the resulting model to better fit experimental data. Promising matches with experimental data are obtained. These relations, coupled with the expression for operating frequency vs. the permittivity are then used to understand the bias field vs. frequency behavior of the antenna. Finally, the effect of the macroscopic variables on the antenna radiation efficiency is discussed.
Fulgurites: a rock magnetic study of mineralogical changes caused by lightning

NASA Astrophysics Data System (ADS)

Begnini, G. S.; Tohver, E.; Schmieder, M.

2013-05-01

Fulgurites are natural glass samples produced by lightning strikes on rock or soil substrates. Instantaneous electrical discharges of 10-200 kA are typical, and the temperatures produced by lightning strikes exceed 1700C, the melting temperature of quartz. Paleomagnetic observations of lightning strikes typically include high intensity remanent magnetizations with highly-variable to random magnetic directions. Alternating field demagnetization is commonly used to remove the overprinting effects of Lightning Induced Remanent Magnetization (LIRM), indicating low coercivities of the magnetic carriers. We conducted a rock magnetic analysis of 15 specimens of natural fulgurite from South Africa including hysteresis and thermoremanent heating and cooling experiments using a Variable Field Translational Balance. The analysed specimens demonstrate two distinct ranges of Curie temperature: 440-600C and 770-778C, suggesting the presence of both iron oxides (likely Fe-rich magnetite) and a reduced iron alloy, likely kamacite. High temperature, highly reduced assemblages have been reported from petrological observations of fulgurites. Our rock magnetic observations of a metallic iron phase in the fulgurite samples from a terrestrial, surficial environment demonstrates a mineralogical resemblance to differentiated, iron-rich meteorites. We suggest that LIRMs in lightning-struck localities may include a chemical remagnetization associated with lightning-induced electrolysis or reduction of iron oxides.
Current activities of medical centers for dementia in Japan.

PubMed

Awata, Shuichi

2014-04-01

We investigated the current activities of medical centers for dementia (MCD), and proposed recommendations for a national dementia strategy. A questionnaire was mailed to 172 hospitals designated as MCD as of 7 August 2012. Data from 117 MCD that adequately responded and were designated by 1 April 2012 were analyzed. The mean and median numbers of medical consultations per MCD were 1035 and 595/year (range 114-8541/year), those of patients diagnosed with dementia-related disorders were 266 and 231/year (range 3-1179/year), those of patients with dementia-related disorders admitted to the MCD hospital were 89 and 47/year (0-1176/year), and mean and median proportions of patients discharged within 2 months were 45.5 and 36.8% (range 0-100%). Outreach services in collaboration with a community general support center were provided in 23.9%, while training for community general support center staff members was carried out in 66.7%. Of MCD hospitals, 31.6% were designated as an emergency medical hospital, and of these, specialist liaison-team services for patients with dementia in the emergency room were provided in 56.8%. Most MCD are considered to function fairly well in line with the guidelines published by the Ministry of Health, Labour and Welfare. However, there is a huge discrepancy in the number of patients diagnosed with dementia-related disorders and the length of stay for inpatient care among facilities. To make all MCD function adequately, the activity of MCD should be monitored longitudinally using the standardized assessment methods. © 2014 Japan Geriatrics Society.
Prevalence and histopathological characteristics of corneal stromal dystrophies in Saudi Arabia.

PubMed

Alzuhairy, Sultan; Alkatan, Hind M; Al-Rajhi, Ali A

2015-01-01

The aim was to determine the frequency and describe the main histopathologic features of corneal stromal dystrophy in Saudi Arabia. A single-center, retrospective analysis of 193 corneal specimens diagnosed with stromal dystrophy. All samples were retrieved from the Histopathology Department at King Khaled Eye Specialist Hospital over a 10-year period (2002 to December 31, 2011). Cases of stromal dystrophy undergoing keratoplasty were included in the study. Routine histopathologic stains and specific stains were used to determine a diagnosis. The corresponding demographic data and basic clinical/surgical information were collected via chart review. The study sample was comprised of 193 eyes. The final diagnoses were macular corneal dystrophy (MCD) in 180 (93.26%) eyes, granular corneal dystrophy (GCD) in 9 (4.66%) and lattice corneal dystrophy (LCD) in 4 (2.07%) eyes. The mean age at presentation was 27.03 years for MCD, 26.33 years for GCD and 53.75 years for LCD. The interval between diagnosis and surgical intervention was not statistically different between the macular and granular groups (P = 0.141). There was a positive family history for the MCD (37.22%) and GCD (44.44%) groups. All eyes underwent penetrating keratoplasty (PKP) except 10 MCD cases that underwent lamellar keratoplasty. Diffuse stromal deposits were present in 87.2% of MCD corneas and 66.67% of GCD corneas. Seventeen eyes with MCD were misdiagnosed as GCD. None of the LCD cases were clinically identified since all of these cases were diagnosed as corneal scarring. In eyes with MCD that underwent PKP, there was diffuse stromal involvement (in 87.22% eyes) and changes in Descemet's membrane (in 53.5% eyes). This pathological study suggested that MCD was the most common corneal stromal dystrophy that required keratoplasty in Saudi Arabia. Patient with MCD and GCD presented at a significantly younger age than LCD. The clinical diagnosis of MCD is not achieved in all cases likely due to a more severe phenotype in the Saudi population or the presence of corneal scarring that is associated with previous trachoma, which obscures the classical appearance of LCD. We believe that PKP is first-line surgical treatment, especially for MCD because it involves all corneal layers. However, deep stromal involvement and changes in Descemet's membrane in MCD should be considered when selecting the surgical procedure.
Prevalence and Histopathological Characteristics of Corneal Stromal Dystrophies in Saudi Arabia

PubMed Central

Alzuhairy, Sultan; Alkatan, Hind M.; Al-Rajhi, Ali A.

2015-01-01

Purpose: The aim was to determine the frequency and describe the main histopathologic features of corneal stromal dystrophy in Saudi Arabia. Methods: A single-center, retrospective analysis of 193 corneal specimens diagnosed with stromal dystrophy. All samples were retrieved from the Histopathology Department at King Khaled Eye Specialist Hospital over a 10-year period (2002 to December 31, 2011). Cases of stromal dystrophy undergoing keratoplasty were included in the study. Routine histopathologic stains and specific stains were used to determine a diagnosis. The corresponding demographic data and basic clinical/surgical information were collected via chart review. Results: The study sample was comprised of 193 eyes. The final diagnoses were macular corneal dystrophy (MCD) in 180 (93.26%) eyes, granular corneal dystrophy (GCD) in 9 (4.66%) and lattice corneal dystrophy (LCD) in 4 (2.07%) eyes. The mean age at presentation was 27.03 years for MCD, 26.33 years for GCD and 53.75 years for LCD. The interval between diagnosis and surgical intervention was not statistically different between the macular and granular groups (P = 0.141). There was a positive family history for the MCD (37.22%) and GCD (44.44%) groups. All eyes underwent penetrating keratoplasty (PKP) except 10 MCD cases that underwent lamellar keratoplasty. Diffuse stromal deposits were present in 87.2% of MCD corneas and 66.67% of GCD corneas. Seventeen eyes with MCD were misdiagnosed as GCD. None of the LCD cases were clinically identified since all of these cases were diagnosed as corneal scarring. In eyes with MCD that underwent PKP, there was diffuse stromal involvement (in 87.22% eyes) and changes in Descemet's membrane (in 53.5% eyes). Conclusion: This pathological study suggested that MCD was the most common corneal stromal dystrophy that required keratoplasty in Saudi Arabia. Patient with MCD and GCD presented at a significantly younger age than LCD. The clinical diagnosis of MCD is not achieved in all cases likely due to a more severe phenotype in the Saudi population or the presence of corneal scarring that is associated with previous trachoma, which obscures the classical appearance of LCD. We believe that PKP is first-line surgical treatment, especially for MCD because it involves all corneal layers. However, deep stromal involvement and changes in Descemet's membrane in MCD should be considered when selecting the surgical procedure. PMID:25949075
Skill of ENSEMBLES seasonal re-forecasts for malaria prediction in West Africa

NASA Astrophysics Data System (ADS)

Jones, A. E.; Morse, A. P.

2012-12-01

This study examines the performance of malaria-relevant climate variables from the ENSEMBLES seasonal ensemble re-forecasts for sub-Saharan West Africa, using a dynamic malaria model to transform temperature and rainfall forecasts into simulated malaria incidence and verifying these forecasts against simulations obtained by driving the malaria model with General Circulation Model-derived reanalysis. Two subregions of forecast skill are identified: the highlands of Cameroon, where low temperatures limit simulated malaria during the forecast period and interannual variability in simulated malaria is closely linked to variability in temperature, and northern Nigeria/southern Niger, where simulated malaria variability is strongly associated with rainfall variability during the peak rain months.
[Influence of road on breeding habitat of Nipponia nippon based on MaxEnt model].

PubMed

Zhang, Hui; Gao, Ji Xi; Ma, Meng Xiao; Shao, Fang Ze; Wang, Qiao; Li, Guang Yu; Qiu, Jie; Zhou, Ke Xin

2017-04-18

Quantitative study on effects of roads on suitable breeding habitats of wildlife is one of topics that need in-depth research in road ecology. Crested ibis (Nipponia nippon), a first class nationally protected bird species, is the species of interest in this research. Using the Maximum Entropy Models (MaxEnt) in the Species Distribution Model (SDM) toolbox of ArcGIS, autocorrelation of environmental variables were analyzed and environmental variables with r>0.8 were removed. Ten environmental variables were chosen as impact factors for the breeding habitat of crested ibis, including mean temperature of coldest quarter, landscape type, normalized difference vegetation index(NDVI), slope, aspect, distance to waters, distance to paddy field, distance to high-grade roads (expressway, national way, provincial way), and distance to low-grade roads (country road). By analyzing the contribution rate of each environmental variable, the results showed that the mean temperature of coldest quarter, landscape type, distance to paddy field, and distance to high-grade roads were the main factors determining breeding habitat of crested ibis. The suitable distribution of crested ibis' nesting area was under the following scenarios: variable road present (scenario1), high-grade road absent (scenario2), and low-grade road absent (scenario 3). The results showed that the presence of roads affected suitable nesting areas of crested ibis with high-grade roads showing a larger influence than low-grade roads. The presence of high-grade roads and low-grade roads decreased the suitable nesting areas of crested ibis by 66.23 and 35.69 km 2 , respectively. The crested ibis preferred to nest in areas distant from high-grade roads, with an average road avoidance distance of 1500 m. This study was of great significance for formulating management measures to protect crested ibis and provide a reference for quantitative assessment on impacts of engineering and construction projects on wildlife.
Two-Dimensional Model Simulations of Interannual Variability in the Tropical Stratosphere

NASA Technical Reports Server (NTRS)

Fleming, Eric L.; Jackman, Charles H.; Considine, David B.; Rosenfeld, Joan; Bhartia, P. K. (Technical Monitor)

2001-01-01

Meteorological data from the United Kingdom Meteorological Office (UKMO) and constituent data from the Upper Atmospheric Research Satellite (UARS) are used to construct yearly zonal mean dynamical fields for the 1990s for use in the GSFC 2-D chemistry and transport model. This allows for interannual dynamical variability to be included in the model constituent simulations. In this study, we focus on the tropical stratosphere. We find that the phase of quasi-biennial oscillation (QBO) signals in equatorial CH4, and profile and total column 03 data is resolved quite well using this empirically- based 2-D model transport framework. However. the QBO amplitudes in the model constituents are systematically underestimated relative to the observations at most levels. This deficiency is probably due in part to the limited vertical resolutions of the 2-D model and the UKMO and UARS input data sets. We find that using different heating rate calculations in the model affects the interannual and QBO amplitudes in the constituent fields, but has little impact on the phase. Sensitivity tests reveal that the QBO in transport dominates the ozone interannual variability in the lower stratosphere. with the effect of the temperature QBO being dominant in the tipper stratosphere via the strong temperature dependence of the ozone loss reaction rates. We also find that the QBO in odd nitrogen radicals, which is caused by the QBO modulated transport of NOy, plays a significant but not dominant role in determining the ozone QBO variability in the middle stratosphere. The model mean age of air is in good overall agreement with that determined from tropical lower,middle stratospheric OMS balloon observations of SF6 and CO2. The interannual variability of tile equatorial mean age in the model increases with altitude and maximizes near 40 km, with a range, of 4-5 years over the 1993-2000 time period.

University of Maryland MRSEC - Research: Seed 3

Science.gov Websites

MRSEC Templates Opportunities Search Home Â» Research Â» Seed 3 Seed 3: Modeling Elastic Effects on controlling parameters and variables include temperature, deposition flux, external electric field and elastic simulating the effects of these controlling factors often lead to predictions that guide future experiments
Temperature variability during delirium in ICU patients: an observational study.

PubMed

van der Kooi, Arendina W; Kappen, Teus H; Raijmakers, Rosa J; Zaal, Irene J; Slooter, Arjen J C

2013-01-01

Delirium is an acute disturbance of consciousness and cognition. It is a common disorder in the intensive care unit (ICU) and associated with impaired long-term outcome. Despite its frequency and impact, delirium is poorly recognized by ICU-physicians and -nurses using delirium screening tools. A completely new approach to detect delirium is to use monitoring of physiological alterations. Temperature variability, a measure for temperature regulation, could be an interesting component to monitor delirium, but whether temperature regulation is different during ICU delirium has not yet been investigated. The aim of this study was to investigate whether ICU delirium is related to temperature variability. Furthermore, we investigated whether ICU delirium is related to absolute body temperature. We included patients who experienced both delirium and delirium free days during ICU stay, based on the Confusion Assessment method for the ICU conducted by a research- physician or -nurse, in combination with inspection of medical records. We excluded patients with conditions affecting thermal regulation or therapies affecting body temperature. Daily temperature variability was determined by computing the mean absolute second derivative of the temperature signal. Temperature variability (primary outcome) and absolute body temperature (secondary outcome) were compared between delirium- and non-delirium days with a linear mixed model and adjusted for daily mean Richmond Agitation and Sedation Scale scores and daily maximum Sequential Organ Failure Assessment scores. Temperature variability was increased during delirium-days compared to days without delirium (β(unadjuste)d=0.007, 95% confidence interval (CI)=0.004 to 0.011, p<0.001). Adjustment for confounders did not alter this result (β(adjusted)=0.005, 95% CI=0.002 to 0.008, p<0.001). Delirium was not associated with absolute body temperature (β(unadjusted)=-0.03, 95% CI=-0.17 to 0.10, p=0.61). This did not change after adjusting for confounders (β(adjusted)=-0.03, 95% CI=-0.17 to 0.10, p=0.63). Our study suggests that temperature variability is increased during ICU delirium.
A multi-sensor remote sensing approach for measuring primary production from space

NASA Technical Reports Server (NTRS)

Gautier, Catherine

1989-01-01

It is proposed to develop a multi-sensor remote sensing method for computing marine primary productivity from space, based on the capability to measure the primary ocean variables which regulate photosynthesis. The three variables and the sensors which measure them are: (1) downwelling photosynthetically available irradiance, measured by the VISSR sensor on the GOES satellite, (2) sea-surface temperature from AVHRR on NOAA series satellites, and (3) chlorophyll-like pigment concentration from the Nimbus-7/CZCS sensor. These and other measured variables would be combined within empirical or analytical models to compute primary productivity. With this proposed capability of mapping primary productivity on a regional scale, we could begin realizing a more precise and accurate global assessment of its magnitude and variability. Applications would include supplementation and expansion on the horizontal scale of ship-acquired biological data, which is more accurate and which supplies the vertical components of the field, monitoring oceanic response to increased atmospheric carbon dioxide levels, correlation with observed sedimentation patterns and processes, and fisheries management.
Impact of Resolution on the Representation of Precipitation Variability Associated With the ITCZ

NASA Astrophysics Data System (ADS)

De Benedetti, Marc; Moore, G. W. K.

2017-12-01

The Intertropical Convergence Zone (ITCZ) is responsible for most of the weather and climate in equatorial regions along with many tropical-midlatitude interactions. It is therefore important to understand how models represent its structure and variability. Most ITCZ-associated precipitation is convective, making it unclear how horizontal resolution impacts its representation. To assess this, we introduce a novel technique that involves calculation of the precipitation field's decorrelation length scale (DCLS) using model data sets that share a common lineage with horizontal resolutions from 16 to 160 km. All resolutions captured the ITCZ's mean structure; however, imprints of topography, such as Hawaii and sea surface temperature, including the variability associated with upwelling cold water off the coast of South America, are more clearly represented at higher resolutions. The DCLS analysis indicates that there are changes in the spatial variability of the ITCZ's precipitation that are not reflected in its mean structure, thus confirming its utility as a diagnostic.
Environmental Variability in the Florida Keys: Impacts on Coral Reef Resilience and Health

NASA Astrophysics Data System (ADS)

Soto, I. M.; Muller-Karger, F. E.

2005-12-01

Environmental variability contributes to both mass mortality and resilience in tropical coral reef communities. We assess variations in sea surface temperature (SST) and ocean color in the Florida Keys using satellite imagery, and provide insight into how this variability is associated with locations of resilient coral communities (those unaffected by or able to recover from major events). The project tests the hypothesis that areas with historically low environmental variability promote lower levels of coral reef resilience. Time series of SST from the Advanced Very High Resolution Radiometer (AVHRR) sensors and ocean color derived quantities (e.g., turbidity and chlorophyll) from the Sea-viewing Wide Field of View Sensor (SeaWiFS) are being constructed over the entire Florida Keys region for a period of twelve and nine years, respectively. These data will be compared with historical coral cover data derived from Landsat imagery (1984-2002). Improved understanding of the causes of coral reef decline or resilience will help protect and manage these natural treasures.
Axisymmetric deformation in a micropolar thermoelastic medium under fractional order theory of thermoelasticity

NASA Astrophysics Data System (ADS)

Kumar, Rajneesh; Singh, Kulwinder; Pathania, Devinder Singh

2017-07-01

The purpose of this paper is to study the variations in temperature, radial and normal displacement, normal stress, shear stress and couple stress in a micropolar thermoelastic solid in the context of fractional order theory of thermoelasticity. Eigen value approach together with Laplace and Hankel transforms are employed to obtain the general solution of the problem. The field variables corresponding to different fractional order theories of thermoelasticity have been obtained in the transformed domain. The general solution is applied to an infinite space subjected to a concentrated load at the origin. To obtained solution in the physical domain numerical inversion technique has been applied and numerically computed results are depicted graphically to analyze the effects of fractional order parameter on the field variables.
Sampling strategies for subsampled segmented EPI PRF thermometry in MR guided high intensity focused ultrasound

DOE Office of Scientific and Technical Information (OSTI.GOV)

Odéen, Henrik, E-mail: h.odeen@gmail.com; Diakite, Mahamadou; Todd, Nick

2014-09-15

Purpose: To investigate k-space subsampling strategies to achieve fast, large field-of-view (FOV) temperature monitoring using segmented echo planar imaging (EPI) proton resonance frequency shift thermometry for MR guided high intensity focused ultrasound (MRgHIFU) applications. Methods: Five different k-space sampling approaches were investigated, varying sample spacing (equally vs nonequally spaced within the echo train), sampling density (variable sampling density in zero, one, and two dimensions), and utilizing sequential or centric sampling. Three of the schemes utilized sequential sampling with the sampling density varied in zero, one, and two dimensions, to investigate sampling the k-space center more frequently. Two of the schemesmore » utilized centric sampling to acquire the k-space center with a longer echo time for improved phase measurements, and vary the sampling density in zero and two dimensions, respectively. Phantom experiments and a theoretical point spread function analysis were performed to investigate their performance. Variable density sampling in zero and two dimensions was also implemented in a non-EPI GRE pulse sequence for comparison. All subsampled data were reconstructed with a previously described temporally constrained reconstruction (TCR) algorithm. Results: The accuracy of each sampling strategy in measuring the temperature rise in the HIFU focal spot was measured in terms of the root-mean-square-error (RMSE) compared to fully sampled “truth.” For the schemes utilizing sequential sampling, the accuracy was found to improve with the dimensionality of the variable density sampling, giving values of 0.65 °C, 0.49 °C, and 0.35 °C for density variation in zero, one, and two dimensions, respectively. The schemes utilizing centric sampling were found to underestimate the temperature rise, with RMSE values of 1.05 °C and 1.31 °C, for variable density sampling in zero and two dimensions, respectively. Similar subsampling schemes with variable density sampling implemented in zero and two dimensions in a non-EPI GRE pulse sequence both resulted in accurate temperature measurements (RMSE of 0.70 °C and 0.63 °C, respectively). With sequential sampling in the described EPI implementation, temperature monitoring over a 192 × 144 × 135 mm{sup 3} FOV with a temporal resolution of 3.6 s was achieved, while keeping the RMSE compared to fully sampled “truth” below 0.35 °C. Conclusions: When segmented EPI readouts are used in conjunction with k-space subsampling for MR thermometry applications, sampling schemes with sequential sampling, with or without variable density sampling, obtain accurate phase and temperature measurements when using a TCR reconstruction algorithm. Improved temperature measurement accuracy can be achieved with variable density sampling. Centric sampling leads to phase bias, resulting in temperature underestimations.« less
Spatio-temporal atmospheric circulation variability around the Antarctic Peninsula based on hemispheric circulation modes and weather types

NASA Astrophysics Data System (ADS)

Wachter, Paul; Beck, Christoph; Philipp, Andreas; Jacobeit, Jucundus; Höppner, Kathrin

2017-04-01

Large parts of the Polar Regions are affected by a warming trend associated with substantial changes in the cryosphere. In Antarctica this positive trend pattern is most dominant in the western part of the continent and on the Antarctic Peninsula (AP). An important driving mechanism of temperature variability and trends in this region is the atmospheric circulation. Changes in atmospheric circulation modes and frequencies of circulation types have major impacts on temperature characteristics at a certain station or region. We present results of a statistical downscaling study focused on AP temperature variability showing both results of large-scale atmospheric circulation modes and regional weather type classifications derived from monthly and daily gridded reanalysis data sets. In order to investigate spatial trends and variabilities of the Southern Annular Mode (SAM), we analyze spatio-temporally resolved SAM-pattern maps from 1979 to 2015. First results show dominant multi-annual to decadal pattern variabilities which can be directly linked to temperature variabilities at the Antarctic Peninsula. A sub-continental to regional view on the influence of atmospheric circulation on AP temperature variability is given by the analysis of weather type classifications (WTC). With this analysis we identify significant changes in the frequency of occurrence of highly temperature-relevant circulation patterns. The investigated characteristics of weather type frequencies can also be related to the identified changes of the SAM.
Requirement of cholesterol in the viral envelope for dengue virus infection.

PubMed

Carro, Ana C; Damonte, Elsa B

2013-06-01

The role of cholesterol in the virus envelope or in the cellular membranes for dengue virus (DENV) infection was examined by depletion with methyl-beta-cyclodextrin (MCD) or nystatin. Pretreatment of virions with MCD or nystatin significantly reduced virus infectivity in a dose-dependent manner. By contrast, pre-treatment of diverse human cell lines with MCD or nystatin did not affect DENV infection. The four DENV serotypes were similarly inactivated by cholesterol-extracting drugs and infectivity was partially rescued when virion suspensions were treated with MCD in the presence of bovine serum. The addition of serum or exogenous water-soluble cholesterol after MCD treatment did not produce a reversion of MCD inactivating effect. Furthermore, virion treatment with extra cholesterol exerted also a virucidal effect. Binding and uptake of cholesterol-deficient DENV into the host cell were not impaired, whereas the next step of fusion between virion envelope and endosome membrane leading to virion uncoating and release of nucleocapsids to the cytoplasm appeared to be prevented, as determined by the retention of capsid protein in cells infected with MCD inactivated-DENV virions. Thereafter, the infection was almost completely inhibited, given the failure of viral RNA synthesis and viral protein expression in cells infected with MCD-treated virions. These data suggest that envelope cholesterol is a critical factor in the fusion process for DENV entry. Copyright © 2013 Elsevier B.V. All rights reserved.
Size dependence of magneto-optical activity in silver nanoparticles with dimensions between 10 and 60 nm studied by MCD spectroscopy.

PubMed

Shiratsu, Taisuke; Yao, Hiroshi

2018-02-07

Size-dependent magneto-optical activity in Ag nanoparticles with dimensions from 10 to 60 nm is demonstrated with magnetic circular dichroism (MCD) spectroscopy. The Ag nanoparticles are prepared on the basis of a seeded-growth strategy using sodium citrate and/or tannic acid as reducing agents in aqueous solution. The obtained nanoparticles are roughly spherical, but those larger than ∼28 nm have a slight diversity of shapes with quasi-spherical polyhedrons. They exhibit a derivative-like MCD response in the localized surface plasmon resonance (LSPR) region, which originates from two circular modes of surface magnetoplasmons. With an increase in the nanoparticle diameter, the bisignated MCD signal is strongly distorted and weakened. Such a distortion for large-sized Ag nanoparticles can be phenomenologically simulated on the basis of both spectral inhomogeneity and MCD signal lobe asymmetry. Then the maximum value of MCD amplitude (MCD max ), which is obtained by normalization of the amplitude to the LSPR peak absorbance, first increases with increasing particle diameter and then decreases with a maximum for the 23 nm nanoparticle. Interestingly, the MCD max values are inversely correlated with the spectral bandwidth of LSPR extinction. This behaviour is discussed from a viewpoint of inhomogeneous effects of both spectral and size/shape distributions. We believe the present results will advance the design and application of optical devices based on magnetoplasmonics.
Delayed endochondral ossification in early medial coronoid disease (MCD): a morphological and immunohistochemical evaluation in growing Labrador retrievers.

PubMed

Lau, S F; Hazewinkel, H A W; Grinwis, G C M; Wolschrijn, C F; Siebelt, M; Vernooij, J C M; Voorhout, G; Tryfonidou, M A

2013-09-01

Medial coronoid disease (MCD) is a common joint disease of dogs. It has a multifactorial aetiology, but the relationship between known causal factors and the disease has yet to be elucidated. As most of the published literature is clinical and it reports changes associated with advanced disease, it is not known whether the changes reflect the cause or consequences of the condition. The aim of this study was to investigate early micromorphological changes occurring in articular cartilage and to describe the postnatal development of the medial coronoid process (MCP) before MCD develops. Three litters of MCD-prone young Labrador retrievers were purpose-bred from a dam and two sires with MCD. Comparisons of the micromorphological appearance of the MCP in MCD-negative and MCD-positive joints demonstrated that MCD was initially associated with a disturbance of endochondral ossification, namely a delay in the calcification of the calcifying zone, without concurrent abnormalities in the superficial layers of the joint cartilage. Cartilage canals containing patent blood vessels were only detected in dogs <12 weeks old, but the role of these channels in impaired ossification requires further investigation. Retained hyaline cartilage might ossify as the disease progresses, but weak areas can develop into cracks between the retained cartilage and the subchondral bone, leading to cleft formation and fragmentation of the MCP. Copyright © 2013 Elsevier Ltd. All rights reserved.
Whole season compared to growth-stage resolved temperature trends: implications for US maize yield

NASA Astrophysics Data System (ADS)

Butler, E. E.; Mueller, N. D.; Huybers, P. J.

2014-12-01

The effect of temperature on maize yield has generally been considered using a single value for the entire growing season. We compare the effect of temperature trends on yield between two distinct models: a single temperature sensitivity for the whole season and a variable sensitivity across four distinct agronomic development stages. The more resolved variable-sensitivity model indicates roughly a factor of two greater influence of temperature on yield than that implied by the single-sensitivity model. The largest discrepancies occur in silking, which is demonstrated to be the most sensitive stage in the variable-sensitivity model. For instance, whereas median yields are observed to be only 53% of typical values during the hottest 1% of silking-stage temperatures, the single-sensitivity model over predicts median yields of 68% whereas the variable-sensitivity model more correctly predicts median yields of 61%. That the variable sensitivity model is also not capable of capturing the full extent of yield losses suggests that further refinement to represent the non-linear response would be useful. Results from the variable sensitivity model also indicate that management decisions regarding planting times, which have generally shifted toward earlier dates, have led to greater yield benefit than that implied by the single-sensitivity model. Together, the variation of both temperature trends and yield variability within growing stages calls for closer attention to how changes in management interact with changes in climate to ultimately affect yields.
Disentangling Global Warming, Multidecadal Variability, and El Niño in Pacific Temperatures

NASA Astrophysics Data System (ADS)

Wills, Robert C.; Schneider, Tapio; Wallace, John M.; Battisti, David S.; Hartmann, Dennis L.

2018-03-01

A key challenge in climate science is to separate observed temperature changes into components due to internal variability and responses to external forcing. Extended integrations of forced and unforced climate models are often used for this purpose. Here we demonstrate a novel method to separate modes of internal variability from global warming based on differences in time scale and spatial pattern, without relying on climate models. We identify uncorrelated components of Pacific sea surface temperature variability due to global warming, the Pacific Decadal Oscillation (PDO), and the El Niño-Southern Oscillation (ENSO). Our results give statistical representations of PDO and ENSO that are consistent with their being separate processes, operating on different time scales, but are otherwise consistent with canonical definitions. We isolate the multidecadal variability of the PDO and find that it is confined to midlatitudes; tropical sea surface temperatures and their teleconnections mix in higher-frequency variability. This implies that midlatitude PDO anomalies are more persistent than previously thought.
The absence of an Atlantic imprint on the multidecadal variability of wintertime European temperature

PubMed Central

Yamamoto, Ayako; Palter, Jaime B.

2016-01-01

Northern Hemisphere climate responds sensitively to multidecadal variability in North Atlantic sea surface temperature (SST). It is therefore surprising that an imprint of such variability is conspicuously absent in wintertime western European temperature, despite that Europe's climate is strongly influenced by its neighbouring ocean, where multidecadal variability in basin-average SST persists in all seasons. Here we trace the cause of this missing imprint to a dynamic anomaly of the atmospheric circulation that masks its thermodynamic response to SST anomalies. Specifically, differences in the pathways Lagrangian particles take to Europe during anomalous SST winters suppress the expected fluctuations in air–sea heat exchange accumulated along those trajectories. Because decadal variability in North Atlantic-average SST may be driven partly by the Atlantic Meridional Overturning Circulation (AMOC), the atmosphere's dynamical adjustment to this mode of variability may have important implications for the European wintertime temperature response to a projected twenty-first century AMOC decline. PMID:26975331
Decadal climate prediction with a refined anomaly initialisation approach

NASA Astrophysics Data System (ADS)

Volpi, Danila; Guemas, Virginie; Doblas-Reyes, Francisco J.; Hawkins, Ed; Nichols, Nancy K.

2017-03-01

In decadal prediction, the objective is to exploit both the sources of predictability from the external radiative forcings and from the internal variability to provide the best possible climate information for the next decade. Predicting the climate system internal variability relies on initialising the climate model from observational estimates. We present a refined method of anomaly initialisation (AI) applied to the ocean and sea ice components of the global climate forecast model EC-Earth, with the following key innovations: (1) the use of a weight applied to the observed anomalies, in order to avoid the risk of introducing anomalies recorded in the observed climate, whose amplitude does not fit in the range of the internal variability generated by the model; (2) the AI of the ocean density, instead of calculating it from the anomaly initialised state of temperature and salinity. An experiment initialised with this refined AI method has been compared with a full field and standard AI experiment. Results show that the use of such refinements enhances the surface temperature skill over part of the North and South Atlantic, part of the South Pacific and the Mediterranean Sea for the first forecast year. However, part of such improvement is lost in the following forecast years. For the tropical Pacific surface temperature, the full field initialised experiment performs the best. The prediction of the Arctic sea-ice volume is improved by the refined AI method for the first three forecast years and the skill of the Atlantic multidecadal oscillation is significantly increased compared to a non-initialised forecast, along the whole forecast time.
Texturing by cooling a metallic melt in a magnetic field.

PubMed

Tournier, Robert F; Beaugnon, Eric

2009-02-01

Processing in a magnetic field leads to the texturing of materials along an easy-magnetization axis when a minimum anisotropy energy exists at the processing temperature; the magnetic field can be applied to a particle assembly embedded into a liquid, or to a solid at a high diffusion temperature close to the melting temperature or between the liquidus and the solidus temperatures in a region of partial melting. It has been shown in many experiments that texturing is easy to achieve in congruent and noncongruent compounds by applying the field above the melting temperature T m or above the liquidus temperature of alloys. Texturing from a melt is successful when the overheating temperature is just a few degrees above T m and fails when the processing time above T m is too long or when the overheating temperature is too high; these observations indicate the presence of unmelted crystals above T m with a size depending on these two variables that act as growth nuclei. A recent model that predicts the existence of unmelted crystals above the melting temperature is used to calculate their radius in a bismuth melt.
Remotely sensed sea surface temperature variability off California during a 'Santa Ana' clearing

NASA Technical Reports Server (NTRS)

Lynn, R. J.; Svejkovsky, J.

1984-01-01

Multichannel atmospheric correction equations for the NOAA 6 proposed by Bernstein (1982) and by McClain (1981) are evaluated by using satellite and in situ data collected over and in the Southern California Bight. The temporal and spatial variation of sea surface temperature over small scales is estimated from the data, and the effect of this variation in matching satellite and in situ data sets is discussed. Changes in the temperature fields between images are examined for diurnal variation and for surface advection of horizontal temperature gradients.
Quantifying the Model-Related Variability of Biomass Stock and Change Estimates in the Norwegian National Forest Inventory

Treesearch

Johannes Breidenbach; Clara Antón-Fernández; Hans Petersson; Ronald E. McRoberts; Rasmus Astrup

2014-01-01

National Forest Inventories (NFIs) provide estimates of forest parameters for national and regional scales. Many key variables of interest, such as biomass and timber volume, cannot be measured directly in the field. Instead, models are used to predict those variables from measurements of other field variables. Therefore, the uncertainty or variability of NFI estimates...
Spatial prediction of wheat Septoria leaf blotch (Septoria tritici) disease severity in central Ethiopia

USGS Publications Warehouse

Wakie, Tewodros; Kumar, Sunil; Senay, Gabriel; Takele, Abera; Lencho, Alemu

2016-01-01

A number of studies have reported the presence of wheat septoria leaf blotch (Septoria tritici; SLB) disease in Ethiopia. However, the environmental factors associated with SLB disease, and areas under risk of SLB disease, have not been studied. Here, we tested the hypothesis that environmental variables can adequately explain observed SLB disease severity levels in West Shewa, Central Ethiopia. Specifically, we identified 50 environmental variables and assessed their relationships with SLB disease severity. Geographically referenced disease severity data were obtained from the field, and linear regression and Boosted Regression Trees (BRT) modeling approaches were used for developing spatial models. Moderate-resolution imaging spectroradiometer (MODIS) derived vegetation indices and land surface temperature (LST) variables highly influenced SLB model predictions. Soil and topographic variables did not sufficiently explain observed SLB disease severity variation in this study. Our results show that wheat growing areas in Central Ethiopia, including highly productive districts, are at risk of SLB disease. The study demonstrates the integration of field data with modeling approaches such as BRT for predicting the spatial patterns of severity of a pathogenic wheat disease in Central Ethiopia. Our results can aid Ethiopia's wheat disease monitoring efforts, while our methods can be replicated for testing related hypotheses elsewhere.
Kinetic Modeling of Corn Fermentation with S. cerevisiae Using a Variable Temperature Strategy.

PubMed

Souza, Augusto C M; Mousaviraad, Mohammad; Mapoka, Kenneth O M; Rosentrater, Kurt A

2018-04-24

While fermentation is usually done at a fixed temperature, in this study, the effect of having a controlled variable temperature was analyzed. A nonlinear system was used to model batch ethanol fermentation, using corn as substrate and the yeast Saccharomyces cerevisiae , at five different fixed and controlled variable temperatures. The lower temperatures presented higher ethanol yields but took a longer time to reach equilibrium. Higher temperatures had higher initial growth rates, but the decay of yeast cells was faster compared to the lower temperatures. However, in a controlled variable temperature model, the temperature decreased with time with the initial value of 40 ∘ C. When analyzing a time window of 60 h, the ethanol production increased 20% compared to the batch with the highest temperature; however, the yield was still 12% lower compared to the 20 ∘ C batch. When the 24 h’ simulation was analyzed, the controlled model had a higher ethanol concentration compared to both fixed temperature batches.

The atmospheric boundary layer in the CSIRO global climate model: simulations versus observations

NASA Astrophysics Data System (ADS)

Garratt, J. R.; Rotstayn, L. D.; Krummel, P. B.

2002-07-01

A 5-year simulation of the atmospheric boundary layer in the CSIRO global climate model (GCM) is compared with detailed boundary-layer observations at six locations, two over the ocean and four over land. Field observations, in the form of surface fluxes and vertical profiles of wind, temperature and humidity, are generally available for each hour over periods of one month or more in a single year. GCM simulations are for specific months corresponding to the field observations, for each of five years. At three of the four land sites (two in Australia, one in south-eastern France), modelled rainfall was close to the observed climatological values, but was significantly in deficit at the fourth (Kansas, USA). Observed rainfall during the field expeditions was close to climatology at all four sites. At the Kansas site, modelled screen temperatures (Tsc), diurnal temperature amplitude and sensible heat flux (H) were significantly higher than observed, with modelled evaporation (E) much lower. At the other three land sites, there is excellent correspondence between the diurnal amplitude and phase and absolute values of each variable (Tsc, H, E). Mean monthly vertical profiles for specific times of the day show strong similarities: over land and ocean in vertical shape and absolute values of variables, and in the mixed-layer and nocturnal-inversion depths (over land) and the height of the elevated inversion or height of the cloud layer (over the sea). Of special interest is the presence climatologically of early morning humidity inversions related to dewfall and of nocturnal low-level jets; such features are found in the GCM simulations. The observed day-to-day variability in vertical structure is captured well in the model for most sites, including, over a whole month, the temperature range at all levels in the boundary layer, and the mix of shallow and deep mixed layers. Weaknesses or unrealistic structure include the following, (a) unrealistic model mixed-layer temperature profiles over land in clear skies, related to use of a simple local first-order turbulence closure, (b) a tendency to overpredict cloud liquid water near the surface.
Marine heatwaves off eastern Tasmania: Trends, interannual variability, and predictability

NASA Astrophysics Data System (ADS)

Oliver, Eric C. J.; Lago, Véronique; Hobday, Alistair J.; Holbrook, Neil J.; Ling, Scott D.; Mundy, Craig N.

2018-02-01

Surface waters off eastern Tasmania are a global warming hotspot. Here, mean temperatures have been rising over several decades at nearly four times the global average rate, with concomitant changes in extreme temperatures - marine heatwaves. These changes have recently caused the marine biodiversity, fisheries and aquaculture industries off Tasmania's east coast to come under stress. In this study we quantify the long-term trends, variability and predictability of marine heatwaves off eastern Tasmania. We use a high-resolution ocean model for Tasmania's eastern continental shelf. The ocean state over the 1993-2015 period is hindcast, providing daily estimates of the three-dimensional temperature and circulation fields. Marine heatwaves are identified at the surface and subsurface from ocean temperature time series using a consistent definition. Trends in marine heatwave frequency are positive nearly everywhere and annual marine heatwave days and penetration depths indicate significant positive changes, particularly off southeastern Tasmania. A decomposition into modes of variability indicates that the East Australian Current is the dominant driver of marine heatwaves across the domain. Self-organising maps are used to identify 12 marine heatwave types, each with its own regionality, seasonality, and associated large-scale oceanic and atmospheric circulation patterns. The implications of this work for marine ecosystems and their management were revealed through review of past impacts and stakeholder discussions regarding use of these data.
Dynamic alterations in the gut microbiota and metabolome during the development of methionine-choline-deficient diet-induced nonalcoholic steatohepatitis.

PubMed

Ye, Jian-Zhong; Li, Ya-Ting; Wu, Wen-Rui; Shi, Ding; Fang, Dai-Qiong; Yang, Li-Ya; Bian, Xiao-Yuan; Wu, Jing-Jing; Wang, Qing; Jiang, Xian-Wan; Peng, Cong-Gao; Ye, Wan-Chun; Xia, Peng-Cheng; Li, Lan-Juan

2018-06-21

To investigate changes in gut microbiota and metabolism during nonalcoholic steatohepatitis (NASH) development in mice fed a methionine-choline-deficient (MCD) diet. Twenty-four male C57BL/6J mice were equally divided into four groups and fed a methionine-choline-sufficient diet for 2 wk (Control 2w group, n = 6) or 4 wk (Control 4w group, n = 6) or the MCD diet for 2 wk (MCD 2w group, n = 6) or 4 wk (MCD 4w group, n = 6). Liver injury, fibrosis, and intestinal barrier function were evaluated after 2 and 4 wk of feeding. The fecal microbiome and metabolome were studied using 16s rRNA deep sequencing and gas chromatography-mass spectrometry. The mice fed the MCD diet presented with simple hepatic steatosis and slight intestinal barrier deterioration after 2 wk. After 4 wk of feeding with the MCD diet, however, the mice developed prominent NASH with liver fibrosis, and the intestinal barrier was more impaired. Compared with the control diet, the MCD diet induced gradual gut microbiota dysbiosis, as evidenced by a marked decrease in the abundance of Alistipes and the ( Eubacterium ) coprostanoligenes group ( P < 0.001 and P < 0.05, respectively) and a significant increase in Ruminococcaceae UCG 014 abundance ( P < 0.05) after 2 wk. At 4 wk, the MCD diet significantly reduced the promising probiotic Bifidobacterium levels and markedly promoted Bacteroides abundance ( P < 0.05, and P < 0.01, respectively). The fecal metabolomic profile was also substantially altered by the MCD diet: At 2 wk, arachidic acid, hexadecane, palmitic acid, and tetracosane were selected as potential biomarkers that were significantly different in the corresponding control group, and at 4 wk, cholic acid, cholesterol, arachidic acid, tetracosane, and stearic acid were selected. The MCD diet induced persistent alterations in the gut microbiota and metabolome.
Dynamic alterations in the gut microbiota and metabolome during the development of methionine-choline-deficient diet-induced nonalcoholic steatohepatitis

PubMed Central

Ye, Jian-Zhong; Li, Ya-Ting; Wu, Wen-Rui; Shi, Ding; Fang, Dai-Qiong; Yang, Li-Ya; Bian, Xiao-Yuan; Wu, Jing-Jing; Wang, Qing; Jiang, Xian-Wan; Peng, Cong-Gao; Ye, Wan-Chun; Xia, Peng-Cheng; Li, Lan-Juan

2018-01-01

AIM To investigate changes in gut microbiota and metabolism during nonalcoholic steatohepatitis (NASH) development in mice fed a methionine-choline-deficient (MCD) diet. METHODS Twenty-four male C57BL/6J mice were equally divided into four groups and fed a methionine-choline-sufficient diet for 2 wk (Control 2w group, n = 6) or 4 wk (Control 4w group, n = 6) or the MCD diet for 2 wk (MCD 2w group, n = 6) or 4 wk (MCD 4w group, n = 6). Liver injury, fibrosis, and intestinal barrier function were evaluated after 2 and 4 wk of feeding. The fecal microbiome and metabolome were studied using 16s rRNA deep sequencing and gas chromatography-mass spectrometry. RESULTS The mice fed the MCD diet presented with simple hepatic steatosis and slight intestinal barrier deterioration after 2 wk. After 4 wk of feeding with the MCD diet, however, the mice developed prominent NASH with liver fibrosis, and the intestinal barrier was more impaired. Compared with the control diet, the MCD diet induced gradual gut microbiota dysbiosis, as evidenced by a marked decrease in the abundance of Alistipes and the (Eubacterium) coprostanoligenes group (P < 0.001 and P < 0.05, respectively) and a significant increase in Ruminococcaceae UCG 014 abundance (P < 0.05) after 2 wk. At 4 wk, the MCD diet significantly reduced the promising probiotic Bifidobacterium levels and markedly promoted Bacteroides abundance (P < 0.05, and P < 0.01, respectively). The fecal metabolomic profile was also substantially altered by the MCD diet: At 2 wk, arachidic acid, hexadecane, palmitic acid, and tetracosane were selected as potential biomarkers that were significantly different in the corresponding control group, and at 4 wk, cholic acid, cholesterol, arachidic acid, tetracosane, and stearic acid were selected. CONCLUSION The MCD diet induced persistent alterations in the gut microbiota and metabolome. PMID:29930468
Uptake of Community Pharmacist-Delivered MedsCheck Diabetes Medication Review Service in Ontario between 2010 and 2014.

PubMed

MacCallum, Lori; Consiglio, Giulia; MacKeigan, Linda; Dolovich, Lisa

2017-06-01

The objective of the study was to describe the demographic and clinical characteristics of MedsCheck Diabetes (MCD) recipients in Ontario between program launch on September 1, 2010, and March 31, 2014. This cohort study leveraged linked administrative claims data. Trends in MCD claims and recipient characteristics were examined. A total of 406,694 Ontarians (45.8% women) received an MCD, representing approximately half of all Ontarians with diabetes. Recipients were more likely to be <66 years of age (54.6%), live in an urban centre (94.6%) and be native to Canada (81.0%). A total of 13,587 MCD follow ups were completed (4.1% of MCD recipients ≥66 years of age and 2.7% of MCD recipients <66 years of age). MCD recipients ≥66 years of age had received a mean of 11 unique prescription medications in the previous year, prior to receiving an MCD, and 12.9% had had high medication costs ($4000+) in the previous year. Metformin was dispensed to 76.4% of recipients, insulin to 20.1% and insulin secretagogues to 36.2%. The most common medication classes used by MCD recipients, other than antihyperglycemics, were antihypertensives (89.5%), antilipid therapies (83.8%), diuretics (52.1%), antibiotics (38.2%) and gastroprotective agents (34.9%). They were also taking high-risk medications, including narcotics (25.4%), anticoagulants (23.3%), nonsteroidal anti-inflammatory drugs (NSAIDs) (21.5%), benzodiazepines (15.5%) and glyburide (15.8%). Over the first 3.5 years of the program, approximately half of Ontarians with diabetes received an MCD. Follow-up assessments were low (2.7% to 4.1% of the population). Ongoing evaluation of the program is required to ensure that continuity of care is being provided to this population. Crown Copyright © 2017. Published by Elsevier Inc. All rights reserved.
Underestimated AMOC Variability and Implications for AMV and Predictability in CMIP Models

NASA Astrophysics Data System (ADS)

Yan, Xiaoqin; Zhang, Rong; Knutson, Thomas R.

2018-05-01

The Atlantic Meridional Overturning Circulation (AMOC) has profound impacts on various climate phenomena. Using both observations and simulations from the Coupled Model Intercomparison Project Phase 3 and 5, here we show that most models underestimate the amplitude of low-frequency AMOC variability. We further show that stronger low-frequency AMOC variability leads to stronger linkages between the AMOC and key variables associated with the Atlantic multidecadal variability (AMV), and between the subpolar AMV signal and northern hemisphere surface air temperature. Low-frequency extratropical northern hemisphere surface air temperature variability might increase with the amplitude of low-frequency AMOC variability. Atlantic decadal predictability is much higher in models with stronger low-frequency AMOC variability and much lower in models with weaker or without AMOC variability. Our results suggest that simulating realistic low-frequency AMOC variability is very important, both for simulating realistic linkages between AMOC and AMV-related variables and for achieving substantially higher Atlantic decadal predictability.
Morphometric variability of Arctodiaptomus salinus (Copepoda) in the Mediterranean-Black Sea region

PubMed Central

ANUFRIIEVA, Elena V.; SHADRIN, Nickolai V.

2015-01-01

Inter-species variability in morphological traits creates a need to know the range of variability of characteristics in the species for taxonomic and ecological tasks. Copepoda Arctodiaptomus salinus, which inhabits water bodies across Eurasia and North Africa, plays a dominant role in plankton of different water bodies-from fresh to hypersaline. This work assesses the intra- and inter-population morphometric variability of A. salinus in the Mediterranean-Black Sea region and discusses some observed regularities. The variability of linear body parameters and proportions was studied. The impacts of salinity, temperature, and population density on morphological characteristics and their variability can manifest themselves in different ways at the intra- and inter-population levels. A significant effect of salinity, pH and temperature on the body proportions was not found. Their intra-population variability is dependent on temperature and salinity. Sexual dimorphism of A. salinus manifests in different linear parameters, proportions, and their variability. There were no effects of temperature, pH and salinity on the female/male parameter ratio. There were significant differences in the body proportions of males and females in different populations. The influence of temperature, salinity, and population density can be attributed to 80%-90% of intra-population variability of A. salinus. However, these factors can explain less than 40% of inter-population differences. Significant differences in the body proportions of males and females from different populations may suggest that some local populations of A. salinus in the Mediterranean-Black Sea region are in the initial stages of differentiation. PMID:26646569
Identification of weather variables sensitive to dysentery in disease-affected county of China.

PubMed

Liu, Jianing; Wu, Xiaoxu; Li, Chenlu; Xu, Bing; Hu, Luojia; Chen, Jin; Dai, Shuang

2017-01-01

Climate change mainly refers to long-term change in weather variables, and it has significant impact on sustainability and spread of infectious diseases. Among three leading infectious diseases in China, dysentery is exclusively sensitive to climate change. Previous researches on weather variables and dysentery mainly focus on determining correlation between dysentery incidence and weather variables. However, the contribution of each variable to dysentery incidence has been rarely clarified. Therefore, we chose a typical county in epidemic of dysentery as the study area. Based on data of dysentery incidence, weather variables (monthly mean temperature, precipitation, wind speed, relative humidity, absolute humidity, maximum temperature, and minimum temperature) and lagged analysis, we used principal component analysis (PCA) and classification and regression trees (CART) to examine the relationships between the incidence of dysentery and weather variables. Principal component analysis showed that temperature, precipitation, and humidity played a key role in determining transmission of dysentery. We further selected weather variables including minimum temperature, precipitation, and relative humidity based on results of PCA, and used CART to clarify contributions of these three weather variables to dysentery incidence. We found when minimum temperature was at a high level, the high incidence of dysentery occurred if relative humidity or precipitation was at a high level. We compared our results with other studies on dysentery incidence and meteorological factors in areas both in China and abroad, and good agreement has been achieved. Yet, some differences remain for three reasons: not identifying all key weather variables, climate condition difference caused by local factors, and human factors that also affect dysentery incidence. This study hopes to shed light on potential early warnings for dysentery transmission as climate change occurs, and provide a theoretical basis for the control and prevention of dysentery. Copyright © 2016 Elsevier B.V. All rights reserved.
Temperature and size variabilities of the Western Pacific Warm Pool

NASA Technical Reports Server (NTRS)

Yan, Xiao-Hai; Ho, Chung-Ru; Zheng, Quanan; Klemas, Vic

1992-01-01

Variabilities in sea-surface temperature and size of the Western Pacific Warm Pool were tracked with 10 years of satellite multichannel sea-surface temperature observations from 1982 to 1991. The results show that both annual mean sea-surface temperature and the size of the warm pool increased from 1983 to 1987 and fluctuated after 1987. Possible causes of these variations include solar irradiance variabilities, El Nino-Southern Oscillaton events, volcanic activities, and global warming.
The Atlantic Multidecadal Variability in surface and deep ocean temperature and salinity fields from unperturbed climate simulations

NASA Astrophysics Data System (ADS)

Zanchettin, D.; Jungclaus, J. H.

2013-12-01

Large multidecadal fluctuations in basin-average sea-surface temperature (SST) are a known feature of observed, reconstructed and simulated variability in the North Atlantic Ocean. This phenomenon is often referred to as Multidecadal Atlantic Variability or AMV. Historical AMV fluctuations are associated with analog basin-scale changes in sea-surface salinity, so that warming corresponds to salinification and cooling to freshening [Polyakov et al., 2005]. The surface imprint of the AMV further corresponds to same-sign fluctuations in the shallow ocean and with opposite-sign fluctuations in the deep ocean for both temperature and salinity [Polyakov et al., 2005]. This out-of-phase behavior reflects the thermohaline overturning circulation shaping North Atlantic's low-frequency variability. Several processes contribute to the AMV, involving both ocean-atmosphere coupled processes and deep ocean circulation [e.g., Grossmann and Klotzbach, 2009]. In particular, recirculation in the North Atlantic subpolar gyre region of salinity anomalies from Arctic freshwater export may trigger multidecadal variability in the Atlantic meridional overturning circulation, and therefore may be part of the AMV [Jungclaus et al., 2005; Dima and Lohmann, 2007]. With this contribution, we aim to improve the physical interpretation of the AMV by investigating spatial and temporal patterns of temperature and salinity fields in the shallow and deep ocean. We focus on two unperturbed millennial-scale simulations performed with the Max Planck Institute Earth system model in its paleo (MPI-ESM-P) and low-resolution (MPI-ESM-LR) configurations, which provide reference control climates for assessments of pre-industrial and historical climate simulations. The two model configurations only differ for the presence, in MPI-ESM-LR, of an active module for dynamical vegetation. We use spatial-average indices and empirical orthogonal functions/principal components to track the horizontal and vertical propagation of temperature and salinity anomalies related to the AMV. In particular, we discuss the potential predictability of multidecadal fluctuations in North Atlantic SSTs based on indices derived from the sea-surface salinity field. We show how the two simulations provide AMV realizations with some distinguishable characteristics, e.g., the typical fluctuations' frequencies and the linkage with the North Atlantic meridional overturning and gyre circulations. We further show how information gained by investigating different definitions of the AMV [Zanchettin et al., 2013] helps designing numerical sensitivity studies for understanding the mechanism(s) behind this phenomenon, concerning both its origin and global impacts. References Dima, M., and G. Lohmann [2007], J. Clim., 20, 2706-2719, doi:10.1175/JCLI4174.1 Jungclaus, J.H., et al. [2005], J. Clim., 18, 4013- 4031, doi:10.1175/JCLI3462.1 Polyakov, I. V., et al. [2005], J. Clim., 18:4562-4581 Grossmann, I., and P. J. Klotzbach [2009], J. Geophys. Res., 114, D24107, doi:10.1029/2009JD012728 Zanchettin D., et al. [2013], Clim. Dyn., doi:10.1007/s00382-013-1669-0
Linking global climate and temperature variability to widespread amphibian declines putatively caused by disease.

PubMed

Rohr, Jason R; Raffel, Thomas R

2010-05-04

The role of global climate change in the decline of biodiversity and the emergence of infectious diseases remains controversial, and the effect of climatic variability, in particular, has largely been ignored. For instance, it was recently revealed that the proposed link between climate change and widespread amphibian declines, putatively caused by the chytrid fungus Batrachochytrium dendrobatidis (Bd), was tenuous because it was based on a temporally confounded correlation. Here we provide temporally unconfounded evidence that global El Niño climatic events drive widespread amphibian losses in genus Atelopus via increased regional temperature variability, which can reduce amphibian defenses against pathogens. Of 26 climate variables tested, only factors associated with temperature variability could account for the spatiotemporal patterns of declines thought to be associated with Bd. Climatic predictors of declines became significant only after controlling for a pattern consistent with epidemic spread (by temporally detrending the data). This presumed spread accounted for 59% of the temporal variation in amphibian losses, whereas El Niño accounted for 59% of the remaining variation. Hence, we could account for 83% of the variation in declines with these two variables alone. Given that global climate change seems to increase temperature variability, extreme climatic events, and the strength of Central Pacific El Niño episodes, climate change might exacerbate worldwide enigmatic declines of amphibians, presumably by increasing susceptibility to disease. These results suggest that changes to temperature variability associated with climate change might be as significant to biodiversity losses and disease emergence as changes to mean temperature.
The influence of climate variables on dengue in Singapore.

PubMed

Pinto, Edna; Coelho, Micheline; Oliver, Leuda; Massad, Eduardo

2011-12-01

In this work we correlated dengue cases with climatic variables for the city of Singapore. This was done through a Poisson Regression Model (PRM) that considers dengue cases as the dependent variable and the climatic variables (rainfall, maximum and minimum temperature and relative humidity) as independent variables. We also used Principal Components Analysis (PCA) to choose the variables that influence in the increase of the number of dengue cases in Singapore, where PC₁ (Principal component 1) is represented by temperature and rainfall and PC₂ (Principal component 2) is represented by relative humidity. We calculated the probability of occurrence of new cases of dengue and the relative risk of occurrence of dengue cases influenced by climatic variable. The months from July to September showed the highest probabilities of the occurrence of new cases of the disease throughout the year. This was based on an analysis of time series of maximum and minimum temperature. An interesting result was that for every 2-10°C of variation of the maximum temperature, there was an average increase of 22.2-184.6% in the number of dengue cases. For the minimum temperature, we observed that for the same variation, there was an average increase of 26.1-230.3% in the number of the dengue cases from April to August. The precipitation and the relative humidity, after analysis of correlation, were discarded in the use of Poisson Regression Model because they did not present good correlation with the dengue cases. Additionally, the relative risk of the occurrence of the cases of the disease under the influence of the variation of temperature was from 1.2-2.8 for maximum temperature and increased from 1.3-3.3 for minimum temperature. Therefore, the variable temperature (maximum and minimum) was the best predictor for the increased number of dengue cases in Singapore.
Distribution of Biopsy-Proven Presumed Primary Glomerulonephropathies in 2000-2011 Among a Racially and Ethnically Diverse US Population.

PubMed

Sim, John J; Batech, Michael; Hever, Aviv; Harrison, Teresa N; Avelar, Taurino; Kanter, Michael H; Jacobsen, Steven J

2016-10-01

The incidence and distribution of primary glomerulonephropathies vary throughout the world and by race and ethnicity. We sought to evaluate the distribution of primary glomerulonephropathies among a large racially and ethnically diverse population of the United States. Case series from January 1, 2000, through December 31, 2011. Adults (aged ≥ 18 years) of an integrated health system who underwent native kidney biopsy and had kidney biopsy findings demonstrating focal segmental glomerulosclerosis (FSGS), membranous glomerulonephritis (MGN), minimal change disease (MCD), immunoglobulin A nephropathy (IgAN), and other. Rates and characteristics of the most common primary glomerulonephropathies overall and by race and ethnicity. 2,501 patients with primary glomerulonephropathy were identified, with a mean age 50.6 years, 45.7% women, 36.1% Hispanics, 31.2% non-Hispanic whites, 17.4% blacks, and 12.4% Asians. FSGS was the most common glomerulonephropathy (38.9%) across all race and ethnic groups, followed by MGN (12.7%), MCD (11.0%), IgAN (10.2%), and other (27.3%). The FSGS category had the greatest proportion of blacks, and patients with FSGS had the highest rate of poverty. IgAN was the second most common glomerulonephropathy among Asians (28.6%), whereas it was 1.2% among blacks. Patients with MGN presented with the highest proteinuria (protein excretion, 8.3g) whereas patients with FSGS had the highest creatinine levels (2.6mg/dL). Overall glomerulonephropathy rates increased annually in our 12-year observation period, driven by FSGS (2.7 cases/100,000) and IgAN (0.7 cases/100,000). MGN and MCD rates remained flat. Missing data for urine albumin and sediment, indication bias in performing kidney biopsies, and inexact classification of primary versus secondary disease. Among a racially and ethnically diverse cohort from a single geographical area and similar environment, FSGS was the most common glomerulonephropathy, but there was variability of other glomerulonephropathies based on race and ethnicity. Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.
Comparison of the Effects of Environmental Parameters on the Growth Variability of Vibrio parahaemolyticus Coupled with Strain Sources and Genotypes Analyses.

PubMed

Liu, Bingxuan; Liu, Haiquan; Pan, Yingjie; Xie, Jing; Zhao, Yong

2016-01-01

Microbial growth variability plays an important role on food safety risk assessment. In this study, the growth kinetic characteristics corresponding to maximum specific growth rate (μmax) of 50 V. parahaemolyticus isolates from different sources and genotypes were evaluated at different temperatures (10, 20, 30, and 37°C) and salinity (0.5, 3, 5, 7, and 9%) using the automated turbidimetric system Bioscreen C. The results demonstrated that strain growth variability increased as the growth conditions became more stressful both in terms of temperature and salinity. The coefficient of variation (CV) of μmax for temperature was larger than that for salinity, indicating that the impact of temperature on strain growth variability was greater than that of salinity. The strains isolated from freshwater aquatic products had more conspicuous growth variations than those from seawater. Moreover, the strains with tlh (+) /tdh (+) /trh (-) exhibited higher growth variability than tlh (+) /tdh (-) /trh (-) or tlh (+) /tdh (-) /trh (+), revealing that gene heterogeneity might have possible relations with the growth variability. This research illustrates that the growth environments, strain sources as well as genotypes have impacts on strain growth variability of V. parahaemolyticus, which can be helpful for incorporating strain variability in predictive microbiology and microbial risk assessment.
Comparison of the Effects of Environmental Parameters on the Growth Variability of Vibrio parahaemolyticus Coupled with Strain Sources and Genotypes Analyses

PubMed Central

Liu, Bingxuan; Liu, Haiquan; Pan, Yingjie; Xie, Jing; Zhao, Yong

2016-01-01

Microbial growth variability plays an important role on food safety risk assessment. In this study, the growth kinetic characteristics corresponding to maximum specific growth rate (μmax) of 50 V. parahaemolyticus isolates from different sources and genotypes were evaluated at different temperatures (10, 20, 30, and 37°C) and salinity (0.5, 3, 5, 7, and 9%) using the automated turbidimetric system Bioscreen C. The results demonstrated that strain growth variability increased as the growth conditions became more stressful both in terms of temperature and salinity. The coefficient of variation (CV) of μmax for temperature was larger than that for salinity, indicating that the impact of temperature on strain growth variability was greater than that of salinity. The strains isolated from freshwater aquatic products had more conspicuous growth variations than those from seawater. Moreover, the strains with tlh+/tdh+/trh− exhibited higher growth variability than tlh+/tdh−/trh− or tlh+/tdh−/trh+, revealing that gene heterogeneity might have possible relations with the growth variability. This research illustrates that the growth environments, strain sources as well as genotypes have impacts on strain growth variability of V. parahaemolyticus, which can be helpful for incorporating strain variability in predictive microbiology and microbial risk assessment. PMID:27446034
Linear response theory for annealing of radiation damage in semiconductor devices

NASA Technical Reports Server (NTRS)

Litovchenko, Vitaly

1988-01-01

A theoretical study of the radiation/annealing response of MOS ICs is described. Although many experiments have been performed in this field, no comprehensive theory dealing with radiation/annealing response has been proposed. Many attempts have been made to apply linear response theory, but no theoretical foundation has been presented. The linear response theory outlined here is capable of describing a broad area of radiation/annealing response phenomena in MOS ICs, in particular, both simultaneous irradiation and annealing, as well as short- and long-term annealing, including the case when annealing is nearing completion. For the first time, a simple procedure is devised to determine the response function from experimental radiation/annealing data. In addition, this procedure enables us to study the effect of variable temperature and dose rate, effects which are of interest in spaceflight. In the past, the shift in threshold potential due to radiation/annealing has usually been assumed to depend on one variable: the time lapse between an impulse dose and the time of observation. While such a suggestion of uniformity in time is certainly true for a broad range of radiation annealing phenomena, it may not hold for some ranges of the variables of interest (temperature, dose rate, etc.). A response function is projected which is dependent on two variables: the time of observation and the time of the impulse dose. This dependence on two variables allows us to extend the theory to the treatment of a variable dose rate. Finally, the linear theory is generalized to the case in which the response is nonlinear with impulse dose, but is proportional to some impulse function of dose. A method to determine both the impulse and response functions is presented.
A CCD Search for Variable Stars of Spectral Type B in the Northern Hemisphere Open Clusters. VII. NGC 1502

NASA Astrophysics Data System (ADS)

Michalska, G.; Pigulski, A.; Stęlicki, M.; Narwid, A.

2009-12-01

We present results of variability search in the field of the young open cluster NGC 1502. Eight variable stars were discovered. Of six other stars in the observed field that were suspected for variability, we confirm variability of two, including one β Cep star, NGC 1502-26. The remaining four suspects were found to be constant in our photometry. In addition, UBVIC photometry of the well-known massive eclipsing binary SZ Cam was obtained. The new variable stars include: two eclipsing binaries of which one is a relatively bright detached system with an EA-type light curve, an α2 CVn-type variable, an SPB candidate, a field RR Lyr star and three other variables showing variability of unknown origin. The variability of two of them is probably related to their emission in Hα, which has been measured by means of the α index obtained for 57 stars brighter than V≍16 mag in the central part of the observed field. Four other non-variable stars with emission in Hα were also found. Additionally, we provide VIC photometry for stars down to V=17 mag and UB photometry for about 50 brightest stars in the observed field. We also show that the 10 Myr isochrone fits very well the observed color-magnitude diagram if a distance of 1 kpc and mean reddening, E(V-IC)=0.9 mag are adopted.
Design of a WSN for the Sampling of Environmental Variability in Complex Terrain

PubMed Central

Martín-Tardío, Miguel A.; Felicísimo, Ángel M.

2014-01-01

In-situ environmental parameter measurements using sensor systems connected to a wireless network have become widespread, but the problem of monitoring large and mountainous areas by means of a wireless sensor network (WSN) is not well resolved. The main reasons for this are: (1) the environmental variability distribution is unknown in the field; (2) without this knowledge, a huge number of sensors would be necessary to ensure the complete coverage of the environmental variability and (3) WSN design requirements, for example, effective connectivity (intervisibility), limiting distances and controlled redundancy, are usually solved by trial and error. Using temperature as the target environmental variable, we propose: (1) a method to determine the homogeneous environmental classes to be sampled using the digital elevation model (DEM) and geometric simulations and (2) a procedure to determine an effective WSN design in complex terrain in terms of the number of sensors, redundancy, cost and spatial distribution. The proposed methodology, based on geographic information systems and binary integer programming can be easily adapted to a wide range of applications that need exhaustive and continuous environmental monitoring with high spatial resolution. The results show that the WSN design is perfectly suited to the topography and the technical specifications of the sensors, and provides a complete coverage of the environmental variability in terms of Sun exposure. However these results still need be validated in the field and the proposed procedure must be refined. PMID:25412218
Quanty4RIXS: a program for crystal field multiplet calculations of RIXS and RIXS-MCD spectra using Quanty.

PubMed

Zimmermann, Patric; Green, Robert J; Haverkort, Maurits W; de Groot, Frank M F

2018-05-01

Some initial instructions for the Quanty4RIXS program written in MATLAB ® are provided. The program assists in the calculation of 1s 2p RIXS and 1s 2p RIXS-MCD spectra using Quanty. Furthermore, 1s XAS and 2p 3d RIXS calculations in different symmetries can also be performed. It includes the Hartree-Fock values for the Slater integrals and spin-orbit interactions for several 3d transition metal ions that are required to create the .lua scripts containing all necessary parameters and quantum mechanical definitions for the calculations. The program can be used free of charge and is designed to allow for further adjustments of the scripts. open access.
Circular magnetoplasmonic modes in gold nanoparticles.

PubMed

Pineider, Francesco; Campo, Giulio; Bonanni, Valentina; Fernández, César de Julián; Mattei, Giovanni; Caneschi, Andrea; Gatteschi, Dante; Sangregorio, Claudio

2013-10-09

The quest for efficient ways of modulating localized surface plasmon resonance is one of the frontiers in current research in plasmonics; the use of a magnetic field as a source of modulation is among the most promising candidates for active plasmonics. Here we report the observation of magnetoplasmonic modes on colloidal gold nanoparticles detected by means of magnetic circular dichroism (MCD) spectroscopy and provide a model that is able to rationalize and reproduce the experiment with unprecedented qualitative and quantitative accuracy. We believe that the steep slope observed at the plasmon resonance in the MCD spectrum can be very efficient in detecting changes in the refractive index of the surrounding medium, and we give a simple proof of principle of its possible implementation for magnetoplasmonic refractometric sensing.

Lipid Metabolism, Oxidative Stress and Cell Death Are Regulated by PKC Delta in a Dietary Model of Nonalcoholic Steatohepatitis

PubMed Central

Greene, Michael W.; Burrington, Christine M.; Lynch, Darin T.; Davenport, Samantha K.; Johnson, Andrew K.; Horsman, Melissa J.; Chowdhry, Saleem; Zhang, Jian; Sparks, Janet D.; Tirrell, Paul C.

2014-01-01

Steatosis, oxidative stress, and apoptosis underlie the development of nonalcoholic steatohepatitis (NASH). Protein kinase C delta (PKCδ) has been implicated in fatty liver disease and is activated in the methionine and choline-deficient (MCD) diet model of NASH, yet its pathophysiological importance towards steatohepatitis progression is uncertain. We therefore addressed the role of PKCδ in the development of steatosis, inflammation, oxidative stress, apoptosis, and fibrosis in an animal model of NASH. We fed PKCδ−/− mice and wildtype littermates a control or MCD diet. PKCδ−/− primary hepatocytes were used to evaluate the direct effects of fatty acids on hepatocyte lipid metabolism gene expression. A reduction in hepatic steatosis and triglyceride levels were observed between wildtype and PKCδ−/− mice fed the MCD diet. The hepatic expression of key regulators of β-oxidation and plasma triglyceride metabolism was significantly reduced in PKCδ−/− mice and changes in serum triglyceride were blocked in PKCδ−/− mice. MCD diet-induced hepatic oxidative stress and hepatocyte apoptosis were reduced in PKCδ−/− mice. MCD diet-induced NADPH oxidase activity and p47phox membrane translocation were blunted and blocked, respectively, in PKCδ−/− mice. Expression of pro-apoptotic genes and caspase 3 and 9 cleavage in the liver of MCD diet fed PKCδ−/− mice were blunted and blocked, respectively. Surprisingly, no differences in MCD diet-induced fibrosis or pro-fibrotic gene expression were observed in 8 week MCD diet fed PKCδ−/− mice. Our results suggest that PKCδ plays a role in key pathological features of fatty liver disease but not ultimately in fibrosis in the MCD diet model of NASH. PMID:24454937
Novel mutations in the CHST6 gene associated with macular corneal dystrophy in southern India.

PubMed

Warren, John F; Aldave, Anthony J; Srinivasan, M; Thonar, Eugene J; Kumar, Abha B; Cevallos, Vicky; Whitcher, John P; Margolis, Todd P

2003-11-01

To further characterize the role of the carbohydrate sulfotransferase (CHST6) gene in macular corneal dystrophy (MCD) through identification of causative mutations in a cohort of affected patients from southern India. Genomic DNA was extracted from buccal epithelium of 75 patients (51 families) with MCD, 33 unaffected relatives, and 48 healthy volunteers. The coding region of the CHST6 gene was evaluated by means of polymerase chain reaction amplification and direct sequencing. Subtyping of MCD into types I and II was performed by measuring serum levels of antigenic keratan sulfate. Seventy patients were classified as having type I MCD, and 5 patients as having type II MCD. Analysis of the CHST6 coding region in patients with type I MCD identified 11 homozygous missense mutations (Leu22Arg, His42Tyr, Arg50Cys, Arg50Leu, Ser53Leu, Arg97Pro, Cys102Tyr, Arg127Cys, Arg205Gln, His249Pro, and Glu274Lys), 2 compound heterozygous missense mutations (Arg93His and Ala206Thr), 5 homozygous deletion mutations (delCG707-708, delC890, delA1237, del1748-1770, and delORF), and 2 homozygous replacement mutations (ACCTAC 1273 GGT, and GCG 1304 AT). One patient with type II MCD was heterozygous for the C890 deletion mutation, whereas 4 possessed no CHST6 coding region mutations. A variety of previously unreported mutations in the coding region of the CHST6 gene are associated with type I MCD in a cohort of patients in southern India. An improved understanding of the genetic basis of MCD allows for earlier, more accurate diagnosis of affected individuals, and may provide the foundation for the development of novel disease treatments.
Hepatic effects of a methionine-choline-deficient diet in hepatocyte RXRalpha-null mice.

PubMed

Gyamfi, Maxwell Afari; Tanaka, Yuji; He, Lin; Klaassen, Curtis D; Wan, Yu-Jui Yvonne

2009-01-15

Retinoid X receptor-alpha (RXRalpha) is an obligate partner for several nuclear hormone receptors that regulate important physiological processes in the liver. In this study the impact of hepatocyte RXRalpha deficiency on methionine and choline deficient (MCD) diet-induced steatosis, oxidative stress, inflammation, and hepatic transporters gene expression were examined. The mRNA of sterol regulatory element-binding protein (SREBP)-regulated genes, important for lipid synthesis, were not altered in wild type (WT) mice, but were increased 2.0- to 5.4-fold in hepatocyte RXRalpha-null (H-RXRalpha-null) mice fed a MCD diet for 14 days. Furthermore, hepatic mRNAs and proteins essential for fatty acid beta-oxidation were not altered in WT mice, but were decreased in the MCD diet-fed H-RXRalpha-null mice, resulting in increased hepatic free fatty acid levels. Cyp2e1 enzyme activity and lipid peroxide levels were induced only in MCD-fed WT mice. In contrast, hepatic mRNA levels of pro-inflammatory factors were increased only in H-RXRalpha-null mice fed the MCD diet. Hepatic uptake transporters Oatp1a1 and Oatp1b2 mRNA levels were decreased in WT mice fed the MCD diet, whereas the efflux transporter Mrp4 was increased. However, in the H-RXRalpha-null mice, the MCD diet only moderately decreased Oatp1a1 and induced both Oatp1a4 and Mrp4 gene expression. Whereas the MCD diet increased serum bile acid levels and alkaline phosphatase activity in both WT and H-RXRalpha-null mice, serum ALT levels were induced (2.9-fold) only in the H-RXRalpha-null mice. In conclusion, these data suggest a critical role for RXRalpha in hepatic fatty acid homeostasis and protection against MCD-induced hepatocyte injury.
Efficacy in Deep Vein Thrombosis Prevention With Extended Mechanical Compression Device Therapy and Prophylactic Aspirin Following Total Knee Arthroplasty: A Randomized Control Trial.

PubMed

Snyder, Mark A; Sympson, Alexandra N; Scheuerman, Christina M; Gregg, Justin L; Hussain, Lala R

2017-05-01

Aspirin at 325 mg twice daily is now included as a nationally approved venous thromboembolism (VTE) prophylaxis protocol for low-risk total knee arthroplasty (TKA) patients. The purpose of this study is to examine whether there is a difference in deep vein thrombosis (DVT) occurrence after a limited tourniquet TKA using aspirin-based prophylaxis with or without extended use of mechanical compression device (MCD) therapy. One hundred limited tourniquet TKA patients, whose DVT risk was managed with aspirin 325 mg twice daily for 3 weeks, were randomized to either using an MCD during hospitalization only or extended use at home up to 6 weeks postoperatively. Lower extremity duplex venous ultrasonography (LEDVU) was completed on the second postoperative day, 14 days postoperatively, and at 3 months postoperatively to confirm the absence of DVT after treatment. The DVT rate for the postdischarge MCD therapy group was 0% and 23.1% for the inpatient MCD group (P < .001). All DVTs resolved by 3 months postoperatively. Patient satisfaction was 9.56 (±0.82) for postdischarge MCD patients vs 8.50 (±1.46) for inpatient MCD patients (P < .001). Limited tourniquet TKA patients who were mobilized early, managed with aspirin for 3 weeks postoperatively, and on MCD therapy for up to 6 weeks postoperatively experienced superior DVT prophylaxis than patients receiving MCD therapy only as an inpatient (P < .05). The 0% incidence of nonsymptomatic DVTs prevented by aspirin and extended-use MCD further validates this type of prophylaxis in low DVT risk TKA patients. Copyright © 2016 Elsevier Inc. All rights reserved.
Metabolic physiology of the invasive clam, Potamocorbula amurensis: the interactive role of temperature, salinity, and food availability.

PubMed

Miller, Nathan A; Chen, Xi; Stillman, Jonathon H

2014-01-01

In biological systems energy serves as the ultimate commodity, often determining species distributions, abundances, and interactions including the potential impact of invasive species on native communities. The Asian clam Potamocorbula amurensis invaded the San Francisco Estuary (SFE) in 1986 and is implicated in the decline of native fish species through resource competition. Using a combined laboratory/field study we examined how energy expenditure in this clam is influenced by salinity, temperature and food availability. Measures of metabolism were made at whole organism (metabolic rate) and biochemical (pyruvate kinase (PK) and citrate synthase (CS) enzyme activities) levels. We found in the field, over the course of a year, the ratio of PK to CS was typically 1.0 suggesting that aerobic and fermentative metabolism were roughly equivalent, except for particular periods characterized by low salinity, higher temperatures, and intermediate food availabilities. In a 30-day laboratory acclimation experiment, however, neither metabolic rate nor PK:CS ratio was consistently influenced by the same variables, though the potential for fermentative pathways did predominate. We conclude that in field collected animals, the addition of biochemical measures of energetic state provide little additional information to the previously measured whole organism metabolic rate. In addition, much of the variation in the laboratory remained unexplained and additional variables, including reproductive stage or body condition may influence laboratory-based results. Further study of adult clams must consider the role of organismal condition, especially reproductive state, in comparisons of laboratory experiments and field observations.
Field studies in support of Nimbus-E surface composition mapping radiometer

NASA Technical Reports Server (NTRS)

Lyon, R. J. P.; Green, A. A.

1973-01-01

If the outputs of the two channels are spacially registered and combined to generate a third variable which reflects the differences between the two outputs, then this variable can then be redisplayed in image form and its magnitude should be relatable to the silica content of the rocks imaged. Two methods were proposed for generating this third variable, the first is to take the difference in apparent temperature between the two channels and the second is to ratio the voltage outputs of the two channels. The responses of the two channel high resolution surface composition mapping radiometer and the thermal channels of the MSDS scanner were calculated from data recorded with the NASA IR pallet and simulate the output of these systems had they been flying over the same targets as the IR pallet.
Change in the magnitude and mechanisms of global temperature variability with warming.

PubMed

Brown, Patrick T; Ming, Yi; Li, Wenhong; Hill, Spencer A

2017-01-01

Natural unforced variability in global mean surface air temperature (GMST) can mask or exaggerate human-caused global warming, and thus a complete understanding of this variability is highly desirable. Significant progress has been made in elucidating the magnitude and physical origins of present-day unforced GMST variability, but it has remained unclear how such variability may change as the climate warms. Here we present modeling evidence that indicates that the magnitude of low-frequency GMST variability is likely to decline in a warmer climate and that its generating mechanisms may be fundamentally altered. In particular, a warmer climate results in lower albedo at high latitudes, which yields a weaker albedo feedback on unforced GMST variability. These results imply that unforced GMST variability is dependent on the background climatological conditions, and thus climate model control simulations run under perpetual preindustrial conditions may have only limited relevance for understanding the unforced GMST variability of the future.
Change in the Magnitude and Mechanisms of Global Temperature Variability with Warming

NASA Astrophysics Data System (ADS)

Brown, P. T.; Ming, Y.; Li, W.; Hill, S. A.

2017-12-01

Natural unforced variability in global mean surface air temperature (GMST) can mask or exaggerate human-caused global warming, and thus a complete understanding of this variability is highly desirable. Significant progress has been made in elucidating the magnitude and physical origins of present-day unforced GMST variability, but it has remained unclear how such variability may change as the climate warms. Here we present modeling evidence that indicates that the magnitude of low-frequency GMST variability is likely to decline in a warmer climate and that its generating mechanisms may be fundamentally altered. In particular, a warmer climate results in lower albedo at high latitudes, which yields a weaker albedo feedback on unforced GMST variability. These results imply that unforced GMST variability is dependent on the background climatological conditions, and thus climate model control simulations run under perpetual preindustrial conditions may have only limited relevance for understanding the unforced GMST variability of the future.
Convection in the Rayleigh-Bénard flow with all fluid properties variable

NASA Astrophysics Data System (ADS)

Sassos, Athanasios; Pantokratoras, Asterios

2011-10-01

In the present paper, the effect of variable fluid properties (density, viscosity, thermal conductivity and specific heat) on the convection in the classical Rayleigh-Bénard problem is investigated. The investigation concerns water, air, and engine oil by taking into account the variation of fluid properties with temperature. The results are obtained by numerically solving the governing equations, using the SIMPLE algorithm and covering large temperature differences. It is found that the critical Rayleigh number increases as the temperature difference increases considering all fluid properties variable. However, when the fluid properties are kept constant, calculated at the mean temperature, and only density is considered variable, the critical Rayleigh number either decreases or remains constant.
Are variations in heterotrophic soil respiration related to changes in substrate availability and microbial biomass carbon in the subtropical forests?

PubMed

Wei, Hui; Chen, Xiaomei; Xiao, Guoliang; Guenet, Bertrand; Vicca, Sara; Shen, Weijun

2015-12-16

Soil temperature and moisture are widely-recognized controlling factors on heterotrophic soil respiration (Rh), although they often explain only a portion of Rh variability. How other soil physicochemical and microbial properties may contribute to Rh variability has been less studied. We conducted field measurements on Rh half-monthly and associated soil properties monthly for two years in four subtropical forests of southern China to assess influences of carbon availability and microbial properties on Rh. Rh in coniferous forest was significantly lower than that in the other three broadleaf species-dominated forests and exhibited obvious seasonal variations in the four forests (P < 0.05). Temperature was the primary factor influencing the seasonal variability of Rh while moisture was not in these humid subtropical forests. The quantity and decomposability of dissolved organic carbon (DOC) were significantly important to Rh variations, but the effect of DOC content on Rh was confounded with temperature, as revealed by partial mantel test. Microbial biomass carbon (MBC) was significantly related to Rh variations across forests during the warm season (P = 0.043). Our results suggest that DOC and MBC may be important when predicting Rh under some conditions, and highlight the complexity by mutual effects of them with environmental factors on Rh variations.
Reequilibration of fluid inclusions in low-temperature calcium-carbonate cement

NASA Astrophysics Data System (ADS)

Goldstein, Robert H.

1986-09-01

Calcium-carbonate cements precipitated in low-temperature, near-surface, vadose environments contain fluid inclusions of variable vapor-to-liquid ratios that yield variable homogenization temperatures. Cements precipitated in low-temperature, phreatic environments contain one-phase, all-liquid fluid inclusions. Neomorphism of unstable calcium-carbonate phases may cause reequilibration of fluid inclusions. Stable calcium-carbonate cements of low-temperature origin, which have been deeply buried, contain fluid inclusions of variable homogenization temperature and variable salt composition. Most inclusion fluids are not representative of the fluids present during cement growth and are more indicative of burial pore fluids. Therefore, low-temperature fluid inclusions probably reequilibrate with burial fluids during progressive burial. Reequilibration is likely caused by high internal pressures in inclusions which result in hydrofracturing. The resulting fluid-inclusion population could contain a nearly complete record of burial fluids in which a particular rock has been bathed. *Present address: Department of Geology, University of Kansas, Lawrence, Kansas 66045
Year-class formation of upper St. Lawrence River northern pike

USGS Publications Warehouse

Smith, B.M.; Farrell, J.M.; Underwood, H.B.; Smith, S.J.

2007-01-01

Variables associated with year-class formation in upper St. Lawrence River northern pike Esox lucius were examined to explore population trends. A partial least-squares (PLS) regression model (PLS 1) was used to relate a year-class strength index (YCSI; 1974-1997) to explanatory variables associated with spawning and nursery areas (seasonal water level and temperature and their variability, number of ice days, and last day of ice presence). A second model (PLS 2) incorporated four additional ecological variables: potential predators (abundance of double-crested cormorants Phalacrocorax auritus and yellow perch Perca flavescens), female northern pike biomass (as a measure of stock-recruitment effects), and total phosphorus (productivity). Trends in adult northern pike catch revealed a decline (1981-2005), and year-class strength was positively related to catch per unit effort (CPUE; R2 = 0.58). The YCSI exceeded the 23-year mean in only 2 of the last 10 years. Cyclic patterns in the YCSI time series (along with strong year-classes every 4-6 years) were apparent, as was a dampening effect of amplitude beginning around 1990. The PLS 1 model explained over 50% of variation in both explanatory variables and the dependent variable, YCSI first-order moving-average residuals. Variables retained (N = 10; Wold's statistic ??? 0.8) included negative YCSI associations with high summer water levels, high variability in spring and fall water levels, and variability in fall water temperature. The YCSI exhibited positive associations with high spring, summer, and fall water temperature, variability in spring temperature, and high winter and spring water level. The PLS 2 model led to positive YCSI associations with phosphorus and yellow perch CPUE and a negative correlation with double-crested cormorant abundance. Environmental variables (water level and temperature) are hypothesized to regulate northern pike YCSI cycles, and dampening in YCSI magnitude may be related to a combination of factors, including wetland habitat changes, reduced nutrient loading, and increased predation by double-crested cormorants. ?? Copyright by the American Fisheries Society 2007.
Heterologous expression of the methyl carbamate-degrading hydrolase MCD.

PubMed

Naqvi, Tatheer; Cheesman, Matthew J; Williams, Michelle R; Campbell, Peter M; Ahmed, Safia; Russell, Robyn J; Scott, Colin; Oakeshott, John G

2009-10-26

The methyl carbamate-degrading hydrolase (MCD) of Achromobacter WM111 has considerable potential as a pesticide bioremediation agent. However this potential has been unrealisable until now because of an inability to express MCD in heterologous hosts such as Escherichia coli. Herein, we describe the first successful attempt to express appreciable quantities of MCD in active form in E. coli, and the subsequent characterisation of the heterologously expressed material. We find that the properties of this material closely match the previously reported properties of MCD produced from Achromobacter WM111. This includes the presence of two distinct forms of the enzyme that we show are most likely due to the presence of two functional translational start sites. The purified enzyme catalyses the hydrolysis of a carbamate (carbaryl), a carboxyl ester (alpha-naphthyl acetate) and a phophotriester (dimethyl umbelliferyl phosphate) and it is relatively resistant to thermal and solvent-mediated denaturation. The robust nature and catalytic promiscuity of MCD suggest that it could be exploited for various biotechnological applications.
[ManNAc, a new therapeutic agent to reduce Angptl4-induced proteinuria in MCD].

PubMed

Clément, Lionel; Macé, Camille

2016-01-01

Current therapies used in minimal change disease (MCD) were originally designed to cure other diseases. They are only partially efficient, and present inconvenient side effects. Therefore, understanding the molecular mechanisms implicated in the pathogenesis of proteinuria in MCD could lead to new therapeutic strategies. A new experimental transgenic rat model of human MCD was generated. These NPHS2-Angptl4 transgenic rats over-express two different forms of the glycoprotein Angptl4 from the podocyte. The majority of the protein shows a lack of sialylation that is implicated in the pathogenesis of proteinuria. Supplementation of ManNAc, a precursor of sialic acid, significantly reduces albuminuria in those rats by increasing sialylation of the hyposialylated form of Angptl4. After treatment of the first episode of MCD with glucocorticoids in patients, ManNAc could be used as a maintenance drug, especially to reduce the frequency and intensity of relapse. ManNAc is a promising therapeutic agent for patients with MCD. © 2016 médecine/sciences – Inserm.
Variability of the Martian thermospheric temperatures during the last 7 Martian Years

NASA Astrophysics Data System (ADS)

Gonzalez-Galindo, Francisco; Lopez-Valverde, Miguel Angel; Millour, Ehouarn; Forget, François

2014-05-01

The temperatures and densities in the Martian upper atmosphere have a significant influence over the different processes producing atmospheric escape. A good knowledge of the thermosphere and its variability is thus necessary in order to better understand and quantify the atmospheric loss to space and the evolution of the planet. Different global models have been used to study the seasonal and interannual variability of the Martian thermosphere, usually considering three solar scenarios (solar minimum, solar medium and solar maximum conditions) to take into account the solar cycle variability. However, the variability of the solar activity within the simulated period of time is not usually considered in these models. We have improved the description of the UV solar flux included on the General Circulation Model for Mars developed at the Laboratoire de Météorologie Dynamique (LMD-MGCM) in order to include its observed day-to-day variability. We have used the model to simulate the thermospheric variability during Martian Years 24 to 30, using realistic UV solar fluxes and dust opacities. The model predicts and interannual variability of the temperatures in the upper thermosphere that ranges from about 50 K during the aphelion to up to 150 K during perihelion. The seasonal variability of temperatures due to the eccentricity of the Martian orbit is modified by the variability of the solar flux within a given Martian year. The solar rotation cycle produces temperature oscillations of up to 30 K. We have also studied the response of the modeled thermosphere to the global dust storms in Martian Year 25 and Martian Year 28. The atmospheric dynamics are significantly modified by the global dust storms, which induces significant changes in the thermospheric temperatures. The response of the model to the presence of both global dust storms is in good agreement with previous modeling results (Medvedev et al., Journal of Geophysical Research, 2013). As expected, the simulated ionosphere is also sensitive to the variability of the solar activity. Acknowledgemnt: Francisco González-Galindo is funded by a CSIC JAE-Doc contract financed by the European Social Fund
Global variability of mesospheric temperature: Mean temperature field

NASA Astrophysics Data System (ADS)

Shepherd, Marianna G.; Evans, Wayne F. J.; Hernandez, G.; Offermann, Dirk; Takahashi, Hisao

2004-12-01

Daytime zonally (longitudinally) averaged temperatures from the Wind Imaging Interferometer (WINDII) on the Upper Atmosphere Research Satellite (UARS) and nightly temperatures from various ground-based hydroxyl airglow observations are employed in the study of the global and seasonal variability of the upper mesospheric temperature field. The study examines the latitudinal variability of the annual cycle of mesospheric temperature at 75, 82, and 87 km employing 7 years (1991-1997) of WINDII mesospheric temperature data at latitudes from 20°S to 65°N at 75 km, 35°S to 65°N at 82 km, and from 45°S to 65°N at 87 km height. Particular attention is given to the latitude region of ±40° around the equator. Harmonic analysis of the 7-year temperature time series reveals the presence of a dominant annual, ˜90- and 60-day oscillations at high northern latitudes and a strong semiannual oscillation (SAO) at equatorial and tropical latitudes. A quasi-biennial oscillation (QBO) is also identified extending from 45°S to 65°N. At 75 km the SAO is manifested as minima in the temperature composites at spring and fall equinox and maxima at winter and summer solstice; at 87 km the SAO is out of phase with respect to the 75-km SAO, with maxima at equinox and minima around the solstice periods. The phase reversal takes place around 82 km and is associated with a mesospheric temperature inversion between 77 and 86 km height. Accounting for tidal contribution by adopting tidal predictions by the Extended Canadian Middle Atmosphere Model (CMAM) shows that a strong temperature decrease (˜35 K) seen during the 1993 March equinox at equatorial and tropical latitudes is not associated with solar migrating tides. WINDII global climatology derived at 75, 82, and 87 km revealed mesospheric SAO asymmetry with a stronger September equinox and interhemispheric asymmetry with a quieter and colder southern hemisphere. Comparisons with independent ground-based observations and the Solar Mesospheric Explorer (SME) satellite data are also presented showing good to excellent agreement in the derived annual and SAO parameters. The results presented provide the first high-vertical-and-temporal resolution global daytime temperature climatology in the upper mesosphere and in the vicinity of the mesopause.
Quantitative Characterization of Spurious Gibbs Waves in 45 CMIP5 Models

NASA Astrophysics Data System (ADS)

Geil, K. L.; Zeng, X.

2014-12-01

Gibbs oscillations appear in global climate models when representing fields, such as orography, that contain discontinuities or sharp gradients. It has been known for decades that the oscillations are associated with the transformation of the truncated spectral representation of a field to physical space and that the oscillations can also be present in global models that do not use spectral methods. The spurious oscillations are potentially detrimental to model simulations (e.g., over ocean) and this work provides a quantitative characterization of the Gibbs oscillations that appear across the Coupled Model Intercomparison Project Phase 5 (CMIP5) models. An ocean transect running through the South Pacific High toward the Andes is used to characterize the oscillations in ten different variables. These oscillations are found to be stationary and hence are not caused by (physical) waves in the atmosphere. We quantify the oscillation amplitude using the root mean square difference (RMSD) between the transect of a variable and its running mean (rather than the constant mean across the transect). We also compute the RMSD to interannual variability (IAV) ratio, which provides a relative measure of the oscillation amplitude. Of the variables examined, the largest RMSD values exist in the surface pressure field of spectral models, while the smallest RMSD values within the surface pressure field come from models that use finite difference (FD) techniques. Many spectral models have a surface pressure RMSD that is 2 to 15 times greater than IAV over the transect and an RMSD:IAV ratio greater than one for many other variables including surface temperature, incoming shortwave radiation at the surface, incoming longwave radiation at the surface, and total cloud fraction. In general, the FD models out-perform the spectral models, but not all the spectral models have large amplitude oscillations and there are a few FD models where the oscillations do appear. Finally, we present a brief comparison of the numerical methods of a select few models to better understand their Gibbs oscillations.
Response of water temperatures and stratification to changing climate in three lakes with different morphometry

NASA Astrophysics Data System (ADS)

Magee, Madeline R.; Wu, Chin H.

2017-12-01

Water temperatures and stratification are important drivers for ecological and water quality processes within lake systems, and changes in these with increases in air temperature and changes to wind speeds may have significant ecological consequences. To properly manage these systems under changing climate, it is important to understand the effects of increasing air temperatures and wind speed changes in lakes of different depths and surface areas. In this study, we simulate three lakes that vary in depth and surface area to elucidate the effects of the observed increasing air temperatures and decreasing wind speeds on lake thermal variables (water temperature, stratification dates, strength of stratification, and surface heat fluxes) over a century (1911-2014). For all three lakes, simulations showed that epilimnetic temperatures increased, hypolimnetic temperatures decreased, the length of the stratified season increased due to earlier stratification onset and later fall overturn, stability increased, and longwave and sensible heat fluxes at the surface increased. Overall, lake depth influences the presence of stratification, Schmidt stability, and differences in surface heat flux, while lake surface area influences differences in hypolimnion temperature, hypolimnetic heating, variability of Schmidt stability, and stratification onset and fall overturn dates. Larger surface area lakes have greater wind mixing due to increased surface momentum. Climate perturbations indicate that our larger study lakes have more variability in temperature and stratification variables than the smaller lakes, and this variability increases with larger wind speeds. For all study lakes, Pearson correlations and climate perturbation scenarios indicate that wind speed has a large effect on temperature and stratification variables, sometimes greater than changes in air temperature, and wind can act to either amplify or mitigate the effect of warmer air temperatures on lake thermal structure depending on the direction of local wind speed changes.
Experimental Verification of Modeled Thermal Distribution Produced by a Piston Source in Physiotherapy Ultrasound

PubMed Central

Lopez-Haro, S. A.; Leija, L.

2016-01-01

Objectives. To present a quantitative comparison of thermal patterns produced by the piston-in-a-baffle approach with those generated by a physiotherapy ultrasonic device and to show the dependency among thermal patterns and acoustic intensity distributions. Methods. The finite element (FE) method was used to model an ideal acoustic field and the produced thermal pattern to be compared with the experimental acoustic and temperature distributions produced by a real ultrasonic applicator. A thermal model using the measured acoustic profile as input is also presented for comparison. Temperature measurements were carried out with thermocouples inserted in muscle phantom. The insertion place of thermocouples was monitored with ultrasound imaging. Results. Modeled and measured thermal profiles were compared within the first 10 cm of depth. The ideal acoustic field did not adequately represent the measured field having different temperature profiles (errors 10% to 20%). Experimental field was concentrated near the transducer producing a region with higher temperatures, while the modeled ideal temperature was linearly distributed along the depth. The error was reduced to 7% when introducing the measured acoustic field as the input variable in the FE temperature modeling. Conclusions. Temperature distributions are strongly related to the acoustic field distributions. PMID:27999801
Infrared-temperature variability in a large agricultural field. [Dunnigan, California

NASA Technical Reports Server (NTRS)

Millard, J. P.; Goettelman, R. C.; Leroy, M. L. (Principal Investigator)

1980-01-01

The combined effect of water carved gullies, varying soil color, moisture state of the soil and crop, nonuniform phenology, and bare spots was measured for commercially grown barley planted on varying terrain. For all but the most rugged terrain, over 80% of the area within 4, 16, 65, and 259 ha cells was at temperatures within 3 C of the mean cell temperature. The result of using relatively small, 4 ha instantaneous field of views for remote sensing applications is that either the worst or the best of conditions is often observed. There appears to be no great advantage in utilizing a small instantaneous field of view instead of a large one for remote sensing of crop canopy temperatures. The two alternatives for design purposes are then either a very high spatial resolution, of the order of a meter or so, where the field is very accurately temperature mapped, or a low resolution, where the actual size seems to make little difference.

Mammographic film-processor temperature, development time, and chemistry: effect on dose, contrast, and noise.

PubMed

Kimme-Smith, C; Rothschild, P A; Bassett, L W; Gold, R H; Moler, C

1989-01-01

Six different combinations of film-processor temperature (33.3 degrees C, 35 degrees C), development time (22 sec, 44 sec), and chemistry (Du Pont medium contrast developer [MCD] and Kodak rapid process [RP] developer) were each evaluated by separate analyses with Hurter and Driffield curves, test images of plastic step wedges, noise variance analysis, and phantom images; each combination also was evaluated clinically. Du Pont MCD chemistry produced greater contrast than did Kodak RP chemistry. A change in temperature from 33.3 degrees C (92 degrees F) to 35 degrees C (95 degrees F) had the least effect on dose and image contrast. Temperatures of 36.7 degrees C (98 degrees F) and 38.3 degrees C (101 degrees F) also were tested with extended processing. The speed increased for 36.7 degrees C but decreased at 38.3 degrees C. Base plus fog increased, but contrast decreased for these higher temperatures. Increasing development time had the greatest effect on decreasing the dose required for equivalent film darkening when imaging BR12 breast equivalent test objects; ion chamber measurements showed a 32% reduction in dose when the development time was increased from 22 to 44 sec. Although noise variance doubled in images processed with the extended development time, diagnostic capability was not compromised. Extending the processing time for mammographic films was an effective method of dose reduction, whereas varying the processing temperature and chemicals had less effect on contrast and dose.
Comment on the paper "Mars Express radio occultation data: A novel analysis approach" by Grandin et al. (2014)

NASA Astrophysics Data System (ADS)

Pätzold, M.; Bird, M. K.; Häusler, B.; Peter, K.; Tellmann, S.; Tyler, G. L.

2016-10-01

In their recent paper, Grandin et al. (2014) claim to have developed a novel approach, principally a ray tracing method, to analyze radio sounding data from occulted spacecraft signals by planetary atmospheres without the usual assumptions of the radio occultation inversion method of a stratified, layered, symmetric atmosphere. They apply their "new approach" to observations of the Mars Express Radio Science (MaRS) experiment and compare their resulting temperature, neutral number density, and electron density profiles with those from MaRS, claiming that there is good agreement with the observations. The fact is, however, that there are serious disagreements in the most important altitude ranges. Their temperature profile shows a 30 K shift or a 300σ (1σ standard deviation = 0.1 K for the MaRS profile near the surface) difference toward warmer temperatures at the surface when compared with MaRS, while the MaRS profile is in best agreement with the profile from the Mars Climate Data Base V5.0 (MCD V5.0). Their full temperature profile from the surface to 250 km altitude deviates significantly from the MCD V5.0 profile. Their ionospheric electron density profile is considerably different from that derived from the MaRs observations. Although Grandin et al. (2014) claim to derive the neutral number density and temperature profiles above 200 km, including the asymptotic exosphere temperature, it is simply not possible to derive this information from what is essentially noise.
Closing the Seasonal Ocean Surface Temperature Balance in the Eastern Tropical Oceans from Remote Sensing and Model Reanalyses

NASA Technical Reports Server (NTRS)

Roberts, J. Brent; Clayson, Carol A.

2012-01-01

The Eastern tropical ocean basins are regions of significant atmosphere-ocean interaction and are important to variability across subseasonal to decadal time scales. The numerous physical processes at play in these areas strain the abilities of coupled general circulation models to accurately reproduce observed upper ocean variability. Furthermore, limitations in the observing system of important terms in the surface temperature balance (e.g., turbulent and radiative heat fluxes, advection) introduce uncertainty into the analyses of processes controlling sea surface temperature variability. This study presents recent efforts to close the surface temperature balance through estimation of the terms in the mixed layer temperature budget using state-of-the-art remotely sensed and model-reanalysis derived products. A set of twelve net heat flux estimates constructed using combinations of radiative and turbulent heat flux products - including GEWEX-SRB, ISCCP-SRF, OAFlux, SeaFlux, among several others - are used with estimates of oceanic advection, entrainment, and mixed layer depth variability to investigate the seasonal variability of ocean surface temperatures. Particular emphasis is placed on how well the upper ocean temperature balance is, or is not, closed on these scales using the current generation of observational and model reanalysis products. That is, the magnitudes and spatial variability of residual imbalances are addressed. These residuals are placed into context within the current uncertainties of the surface net heat fluxes and the role of the mixed layer depth variability in scaling the impact of those uncertainties, particularly in the shallow mixed layers of the Eastern tropical ocean basins.
Effects of climate change and variability on population dynamics in a long-lived shorebird.

PubMed

van de Pol, Martijn; Vindenes, Yngvild; Saether, Bernt-Erik; Engen, Steinar; Ens, Bruno J; Oosterbeek, Kees; Tinbergen, Joost M

2010-04-01

Climate change affects both the mean and variability of climatic variables, but their relative impact on the dynamics of populations is still largely unexplored. Based on a long-term study of the demography of a declining Eurasian Oystercatcher (Haematopus ostralegus) population, we quantify the effect of changes in mean and variance of winter temperature on different vital rates across the life cycle. Subsequently, we quantify, using stochastic stage-structured models, how changes in the mean and variance of this environmental variable affect important characteristics of the future population dynamics, such as the time to extinction. Local mean winter temperature is predicted to strongly increase, and we show that this is likely to increase the population's persistence time via its positive effects on adult survival that outweigh the negative effects that higher temperatures have on fecundity. Interannual variation in winter temperature is predicted to decrease, which is also likely to increase persistence time via its positive effects on adult survival that outweigh the negative effects that lower temperature variability has on fecundity. Overall, a 0.1 degrees C change in mean temperature is predicted to alter median time to extinction by 1.5 times as many years as would a 0.1 degrees C change in the standard deviation in temperature, suggesting that the dynamics of oystercatchers are more sensitive to changes in the mean than in the interannual variability of this climatic variable. Moreover, as climate models predict larger changes in the mean than in the standard deviation of local winter temperature, the effects of future climatic variability on this population's time to extinction are expected to be overwhelmed by the effects of changes in climatic means. We discuss the mechanisms by which climatic variability can either increase or decrease population viability and how this might depend both on species' life histories and on the vital rates affected. This study illustrates that, for making reliable inferences about population consequences in species in which life history changes with age or stage, it is crucial to investigate the impact of climate change on vital rates across the entire life cycle. Disturbingly, such data are unavailable for most species of conservation concern.
Comparing daily temperature averaging methods: the role of surface and atmosphere variables in determining spatial and seasonal variability

NASA Astrophysics Data System (ADS)

Bernhardt, Jase; Carleton, Andrew M.

2018-05-01

The two main methods for determining the average daily near-surface air temperature, twice-daily averaging (i.e., [Tmax+Tmin]/2) and hourly averaging (i.e., the average of 24 hourly temperature measurements), typically show differences associated with the asymmetry of the daily temperature curve. To quantify the relative influence of several land surface and atmosphere variables on the two temperature averaging methods, we correlate data for 215 weather stations across the Contiguous United States (CONUS) for the period 1981-2010 with the differences between the two temperature-averaging methods. The variables are land use-land cover (LULC) type, soil moisture, snow cover, cloud cover, atmospheric moisture (i.e., specific humidity, dew point temperature), and precipitation. Multiple linear regression models explain the spatial and monthly variations in the difference between the two temperature-averaging methods. We find statistically significant correlations between both the land surface and atmosphere variables studied with the difference between temperature-averaging methods, especially for the extreme (i.e., summer, winter) seasons (adjusted R2 > 0.50). Models considering stations with certain LULC types, particularly forest and developed land, have adjusted R2 values > 0.70, indicating that both surface and atmosphere variables control the daily temperature curve and its asymmetry. This study improves our understanding of the role of surface and near-surface conditions in modifying thermal climates of the CONUS for a wide range of environments, and their likely importance as anthropogenic forcings—notably LULC changes and greenhouse gas emissions—continues.
Removal of Hg(II) from aqueous solution by resin loaded magnetic β-cyclodextrin bead and graphene oxide sheet: Synthesis, adsorption mechanism and separation properties.

PubMed

Cui, Limei; Wang, Yaoguang; Gao, Liang; Hu, Lihua; Wei, Qin; Du, Bin

2015-10-15

Resin loaded magnetic β-cyclodextrin bead and graphene oxide sheet (MCD-GO-R) was synthesized successfully and found to be an excellent adsorbent for Hg(II) removal. The as-prepared adsorbent was characterized by SEM, FTIR, BET, magnetization curve and zeta potential analysis respectively. Good magnetic performance made MCD-GO-R simply recover from aqueous solution at low magnetic field within 30s. And also, the rich functional groups and outstanding dispersity play an important role in the adsorption process. The maximum adsorption capacity was 88.43 mg g(-1) at 323 K and pH 7.1. The as-prepared adsorbent could perform well in a wide pH range from 4.0 to 10.0. Static adsorption experimental data showed good correlation with pseudo-second-order model and Freundlich isotherm models. It was found that the contaminant adsorption was accomplished mainly via chelation or ion exchange and come to equilibrium in only 30 min. All experimental results, especially the excellent reproducibility and resistance to ion interference, suggest that MCD-GO-R has promising applications in water treatment. Copyright © 2015 Elsevier Inc. All rights reserved.
Ecosystem dynamics and disturbance in mountain wildernesses: assessing vulnerability of natural resources to change

Treesearch

Daniel B. Fagre; David L. Peterson

2000-01-01

An integrated program of ecosystem modeling and extensive field studies at Glacier and Olympic National Parks has quantified many of the ecological processes affected by climatic variability and disturbance. Models have successfully estimated snow distribution, annual watershed discharge, and stream temperature variation based on seven years of monitoring. Various...
Magneto Transport of CVD Carbon in Artificial Opals

NASA Astrophysics Data System (ADS)

Wang, Lei; Yin, Ming; Arammash, Fauzi; Datta, Timir

2014-03-01

Magneto-transport of carbon inverse opal structures were investigated in the 2.5 to 300 K temperatures and magnetic fields in the 0-10T regime. Qualitatively, our observations lie between those reported by previous researchers. Over this temperature range, transport (in zero magnetic field) is non-metallic; the resistance decreased with rising temperature however the temperature dependent behavior is not activated, as observed with variable range hopping. In three-dimensions, such behavior can also be the result of weak localization and electron-electron interactions; in particular the change in conductivity is a polynomial in fractional powers of absolute temperature. At sub-helium temperature regimes the relative magneto resistance is measured to be ~ 0.1 percent per Tesla. Results of data analysis for several different scenarios will be reported. DOD award #60177-RT-H from the ARO.
A variable temperature EPR study of Mn(2+)-doped NH(4)Cl(0.9)I(0.1) single crystal at 170 GHz: zero-field splitting parameter and its absolute sign.

PubMed

Misra, Sushil K; Andronenko, Serguei I; Chand, Prem; Earle, Keith A; Paschenko, Sergei V; Freed, Jack H

2005-06-01

EPR measurements have been carried out on a single crystal of Mn(2+)-doped NH(4)Cl(0.9)I(0.1) at 170-GHz in the temperature range of 312-4.2K. The spectra have been analyzed (i) to estimate the spin-Hamiltonian parameters; (ii) to study the temperature variation of the zero-field splitting (ZFS) parameter; (iii) to confirm the negative absolute sign of the ZFS parameter unequivocally from the temperature-dependent relative intensities of hyperfine sextets at temperatures below 10K; and (iv) to detect the occurrence of a structural phase transition at 4.35K from the change in the structure of the EPR lines with temperature below 10K.
Complexity and Challenges in Noncontact High Temperature Measurements in Microwave-Assisted Catalytic Reactors

PubMed Central

2017-01-01

The complexity and challenges in noncontact temperature measurements inside microwave-heated catalytic reactors are presented in this paper. A custom-designed microwave cavity has been used to focus the microwave field on the catalyst and enable monitoring of the temperature field in 2D. A methodology to study the temperature distribution in the catalytic bed by using a thermal camera in combination with a thermocouple for a heterogeneous catalytic reaction (methane dry reforming) under microwave heating has been demonstrated. The effects of various variables that affect the accuracy of temperature recordings are discussed in detail. The necessity of having at least one contact sensor, such as a thermocouple, or some other microwave transparent sensor, is recommended to keep track of the temperature changes occurring in the catalytic bed during the reaction under microwave heating. PMID:29170599
Weather Variability Associated with Aedes (Stegomyia) aegypti (Dengue Vector) Oviposition Dynamics in Northwestern Argentina

PubMed Central

Estallo, Elizabet L.; Ludueña-Almeida, Francisco F.; Introini, María V.; Zaidenberg, Mario; Almirón, Walter R.

2015-01-01

This study aims to develop a forecasting model by assessing the weather variability associated with seasonal fluctuation of Aedes aegypti oviposition dynamic at a city level in Orán, in northwestern Argentina. Oviposition dynamics were assessed by weekly monitoring of 90 ovitraps in the urban area during 2005-2007. Correlations were performed between the number of eggs collected weekly and weather variables (rainfall, photoperiod, vapor pressure of water, temperature, and relative humidity) with and without time lags (1 to 6 weeks). A stepwise multiple linear regression analysis was performed with the set of meteorological variables from the first year of study with the variables in the time lags that best correlated with the oviposition. Model validation was conducted using the data from the second year of study (October 2006- 2007). Minimum temperature and rainfall were the most important variables. No eggs were found at temperatures below 10°C. The most significant time lags were 3 weeks for minimum temperature and rains, 3 weeks for water vapor pressure, and 6 weeks for maximum temperature. Aedes aegypti could be expected in Orán three weeks after rains with adequate min temperatures. The best-fit forecasting model for the combined meteorological variables explained 70 % of the variance (adj. R2). The correlation between Ae. aegypti oviposition observed and estimated by the forecasting model resulted in rs = 0.80 (P < 0.05). The forecasting model developed would allow prediction of increases and decreases in the Ae. aegypti oviposition activity based on meteorological data for Orán city and, according to the meteorological variables, vector activity can be predicted three or four weeks in advance. PMID:25993415
A maximum likelihood convolutional decoder model vs experimental data comparison

NASA Technical Reports Server (NTRS)

Chen, R. Y.

1979-01-01

This article describes the comparison of a maximum likelihood convolutional decoder (MCD) prediction model and the actual performance of the MCD at the Madrid Deep Space Station. The MCD prediction model is used to develop a subroutine that has been utilized by the Telemetry Analysis Program (TAP) to compute the MCD bit error rate for a given signal-to-noise ratio. The results indicate that that the TAP can predict quite well compared to the experimental measurements. An optimal modulation index also can be found through TAP.
Linkage of a gene for macular corneal dystrophy to chromosome 16.

PubMed Central

Vance, J. M.; Jonasson, F.; Lennon, F.; Sarrica, J.; Damji, K. F.; Stauffer, J.; Pericak-Vance, M. A.; Klintworth, G. K.

1996-01-01

Autosomal recessive macular corneal dystrophy (MCD) is a heterogeneous disorder leading to visual impairment. Sixteen American and Icelandic families (11 type I and 5 type II) were analyzed for linkage, by use of 208 polymorphic microsatellite markers. A significant maximum LOD score Zmax of 7.82 at a maximum recombination fraction (thetamax) of .06 was found with the 16q22 locus D16S518 for MCD type I. In addition, a peak LOD score of 2.50 at a recombination fraction of .00 was obtained for the MCD type II families, by use of the identical marker. These findings raise the possibility that MCD type II may be due to the same genetic locus that is involved in MCD type I. PMID:8644739
Tragedy in moral case deliberation.

PubMed

Spronk, Benita; Stolper, Margreet; Widdershoven, Guy

2017-09-01

In healthcare practice, care providers are confronted with tragic situations, in which they are expected to make choices and decisions that can have far-reaching consequences. This article investigates the role of moral case deliberation (MCD) in dealing with tragic situations. It focuses on experiences of care givers involved in the treatment of a pregnant woman with a brain tumour, and their evaluation of a series of MCD meetings in which the dilemmas around care were discussed. The study was qualitative, focusing on the views and experiences of the participants. A case study design is used by conducting semi-structured interviews (N = 10) with health care professionals who both played a role in the treatment of the patient and attended the MCD. The results show that MCD helps people to deal with tragic situations. An important element of MCD in this respect is making explicit the dilemma and the damage, demonstrating that there is no simple solution. MCD prompts participants to formulate and share personal experiences with one another and thus helps to create a shared perception of the situation as tragic. The article concludes that MCD contributes to the sharing of tragic experiences, and fosters mutual interaction during a tragedy. Its value could be increased through explicit reflection on the aspect of contingency that characterises tragedy.
CHST6 mutations in North American subjects with macular corneal dystrophy: a comprehensive molecular genetic review.

PubMed

Klintworth, Gordon K; Smith, Clayton F; Bowling, Brandy L

2006-03-10

To evaluate mutations in the carbohydrate sulfotransferase-6 (CHST6) gene in American subjects with macular corneal dystrophy (MCD). We analyzed CHST6 in 57 patients from 31 families with MCD from the United States, 57 carriers (parents or children), and 27 unaffected blood relatives of affected subjects. We compared the observed nucleotide sequences with those found by numerous investigators in other populations with MCD and in controls. In 24 families, the corneal disorder could be explained by mutations in the coding region of CHST6 or in the region upstream of this gene in both the maternal and paternal chromosome. In most instances of MCD a homozygous or heterozygous missense mutation in exon 3 of CHST6 was found. Six cases resulted from a deletion upstream of CHST6. Nucleotide changes within the coding region of CHST6 are predicted to alter the encoded protein significantly within evolutionary conserved parts of the encoded sulfotransferase. Our findings support the hypothesis that CHST6 mutations are cardinal to the pathogenesis of MCD. Moreover, the observation that some cases of MCD cannot be explained by mutations in CHST6 suggests that MCD may result from other subtle changes in CHST6 or from genetic heterogeneity.
Ecosystem response to climatic variables - air temperature and precipitation: How can these variables alter plant productions in C4-grass dominant ecosystem?

NASA Astrophysics Data System (ADS)

Jung, C. G.; Jiang, L.; Luo, Y.

2017-12-01

Understanding net primary production (NPP) response to the key climatic variables, temperature and precipitation, is essential since the response could be represented by one of future consequences from ecosystem responses. Under future climatic warming, fluctuating precipitation is expected. In addition, NPP solely could not explain whole ecosystem response; therefore, not only NPP, but also above- and below-ground NPP (ANPP and BNPP, respectively) need to be examined. This examination needs to include how the plant productions response along temperature and precipitation gradients. Several studies have examined the response of NPP against each of single climatic variable, but understanding the response of ANPP and BNPP to the multiple variables is notably poor. In this study, we used the plant productions data (NPP, ANPP, and BNPP) with climatic variables, i.e., air temperature and precipitation, from 1999 to 2015 under warming and clipping treatments (mimicking hay-harvesting) in C4-grass dominant ecosystem located in central Oklahoma, United States. Firstly, we examined the nonlinear relationships with the climatic variables for NPP, ANPP and BNPP; and then predicted possible responses in the temperature - precipitation space by using a linear mixed effect model. Nonlinearities of NPP, ANPP and BNPP to the climatic variables have been found to show unimodal curves, and nonlinear models have better goodness of fit as shown lower Akaike information criterion (AIC) than linear models. Optimum condition for NPP is represented at high temperature and precipitation level whereas BNPP is maximized at moderate precipitation levels while ANPP has same range of NPP's optimum condition. Clipping significantly reduced ANPP while there was no clipping effect on NPP and BNPP. Furthermore, inclining NPP and ANPP have shown in a range from moderate to high precipitation level with increasing temperature while inclining pattern for BNPP was observed in moderate precipitation level. Overall, the C4-grass dominant ecosystem has a potential for considerable increases in NPP in hotter and wetter conditions as shown a range from moderate to high temperature and precipitation levels; ANPP has peaked at the high temperature and precipitation level, but maximum BNPP needs moderate precipitation level and high temperature.
Genetic analysis of CHST6 and TGFBI in Turkish patients with corneal dystrophies: Five novel variations in CHST6

PubMed Central

Yaylacioglu Tuncay, Fulya; Kayman Kurekci, Gülsüm; Guntekin Ergun, Sezen; Pasaoglu, Ozge Tugce; Akata, Rustu Fikret; Dincer, Pervin Rukiye

2016-01-01

Purpose To identify pathogenic variations in carbohydrate sulfotransferase 6 (CHST6) and transforming growth factor, beta-induced (TGFBI) genes in Turkish patients with corneal dystrophy (CD). Methods In this study, patients with macular corneal dystrophy (MCD; n = 18), granular corneal dystrophy type 1 (GCD1; n = 12), and lattice corneal dystrophy type 1 (LCD1; n = 4), as well as 50 healthy controls, were subjected to clinical and genetic examinations. The level of antigenic keratan sulfate (AgKS) in the serum samples of patients with MCD was determined with enzyme-linked immunosorbent assay (ELISA) to immunophenotypically subtype the patients as MCD type I and MCD type II. DNA was isolated from venous blood samples from the patients and controls. Variations were analyzed with DNA sequencing in the coding region of CHST6 in patients with MCD and exons 4 and 12 in TGFBI in patients with LCD1 and GCD1. Clinical characteristics and the detected variations were evaluated to determine any existing genotype–phenotype correlations. Results The previously reported R555W mutation in TGFBI was detected in 12 patients with GCD1, and the R124C mutation in TGFBI was detected in four patients with LCD1. Serum AgKS levels indicated that 12 patients with MCD were in subgroup I, and five patients with MCD were in subgroup II. No genetic variation was detected in the coding region of CHST6 for three patients with MCD type II. In other patients with MCD, three previously reported missense variations (c. 1A>T, c.738C>G, and c.631 C>T), three novel missense variations (c.164 T>C, c.526 G>A, c. 610 C>T), and two novel frameshift variations (c.894_895 insG and c. 462_463 delGC) were detected. These variations did not exist in the control chromosomes, 1000 Genomes, and dbSNP. Conclusions This is the first molecular analysis of TGFBI and CHST6 in Turkish patients with different types of CD. We detected previously reported, well-known hot spot mutations in TGFBI in the patients with GCD1 and LCD1. Eight likely pathogenic variations in CHST6, five of them novel, were reported in patients with MCD, which enlarges the mutational spectrum of MCD. PMID:27829782
Genetic analysis of CHST6 and TGFBI in Turkish patients with corneal dystrophies: Five novel variations in CHST6.

PubMed

Yaylacioglu Tuncay, Fulya; Kayman Kurekci, Gülsüm; Guntekin Ergun, Sezen; Pasaoglu, Ozge Tugce; Akata, Rustu Fikret; Dincer, Pervin Rukiye

2016-01-01

To identify pathogenic variations in carbohydrate sulfotransferase 6 ( CHST6 ) and transforming growth factor, beta-induced ( TGFBI ) genes in Turkish patients with corneal dystrophy (CD). In this study, patients with macular corneal dystrophy (MCD; n = 18), granular corneal dystrophy type 1 (GCD1; n = 12), and lattice corneal dystrophy type 1 (LCD1; n = 4), as well as 50 healthy controls, were subjected to clinical and genetic examinations. The level of antigenic keratan sulfate (AgKS) in the serum samples of patients with MCD was determined with enzyme-linked immunosorbent assay (ELISA) to immunophenotypically subtype the patients as MCD type I and MCD type II. DNA was isolated from venous blood samples from the patients and controls. Variations were analyzed with DNA sequencing in the coding region of CHST6 in patients with MCD and exons 4 and 12 in TGFBI in patients with LCD1 and GCD1. Clinical characteristics and the detected variations were evaluated to determine any existing genotype-phenotype correlations. The previously reported R555W mutation in TGFBI was detected in 12 patients with GCD1, and the R124C mutation in TGFBI was detected in four patients with LCD1. Serum AgKS levels indicated that 12 patients with MCD were in subgroup I, and five patients with MCD were in subgroup II. No genetic variation was detected in the coding region of CHST6 for three patients with MCD type II. In other patients with MCD, three previously reported missense variations (c. 1A>T, c.738C>G, and c.631 C>T), three novel missense variations (c.164 T>C, c.526 G>A, c. 610 C>T), and two novel frameshift variations (c.894_895 insG and c. 462_463 delGC) were detected. These variations did not exist in the control chromosomes, 1000 Genomes, and dbSNP. This is the first molecular analysis of TGFBI and CHST6 in Turkish patients with different types of CD. We detected previously reported, well-known hot spot mutations in TGFBI in the patients with GCD1 and LCD1. Eight likely pathogenic variations in CHST6 , five of them novel, were reported in patients with MCD, which enlarges the mutational spectrum of MCD.
Clinical spectrum of intrathoracic Castleman disease: a retrospective analysis of 48 cases in a single Chinese hospital.

PubMed

Luo, Jin Mei; Li, Shan; Huang, Hui; Cao, Jian; Xu, Kai; Bi, Ya Lan; Feng, Rui E; Huang, Cheng; Qin, Ying Zhi; Xu, Zuo Jun; Xiao, Yi

2015-04-09

Thorax is the common place to develop Castleman disease (CD), but there is no systemic clinical analysis for intrathoracic CD. We conducted a retrospective analysis of 48 intrathoracic CD patients with definite pathological diagnosis who were hospitalized between 1992 and 2012 in a Chinese tertiary referral hospital. The study included 16 cases with unicentric CD (UCD) and 32 cases with multicentric CD (MCD). UCD were younger than MCD (30.5y vs 41.6ys, P < 0.05). MCD were more symptomatic (50% vs 96.9%, P < 0.001) and sicker than UCD, including more fever, hepatomegaly and/or splenomegaly and hypoalbuminemia. All of UCD showed solitary mass in various sites and two of them were complicated by small pleural effusion. In the MCD group, their chest CT showed obvious lymphadenopathy in the hilum and/or mediastinum (100%), diffuse parenchymal lung shadows (43.75%), pleural effusion (40.6%), mass in the mediastinum (6.25%) or hilum (3.12%) and bronchiolitis obliterans (BO) (3.12%). Besides LIP-like images, multiple nodules of different size and sites, patchy, ground-glass opacities and consolidation were showed in their chest CT. Surgery were arranged for all UCD for diagnosis and treatment and all were alive. In MCD group, superficial lymph nodes biopsies (21 cases), surgery biopsy (9 cases) and CT-guided percutaneous lung biopsy (2 cases) were performed. Hyaline vascular (HV) variant were more common in the UCD group (75% vs 37.5%, P < 0.05). In MCD group, 28 cases were prescribed with chemotherapy, one refused to receive therapy and the rest three were arranged for regular follow-up. Among MCD, 18 cases was improved, 7 cases was stable, 4 cases lost follow-up and 3 cases died. Intrathoracic MCD was more common than UCD in our hospital. MCD was older, more symptomic and sicker than UCD. HV variant were more common in UCD. All of UCD showed mass in various intrathoracic locations and surgery resection was performed for all and all were alive. Mass, pleural effusion, BO and diffuse pulmonary shadows, including LIP-like images, multiple nodules of different size and sites, patchy, GGO and consolidations were showed in our MCD. Most of MCD cases were arranged with chemotherapy and their prognosis were worse than UCD's.
Variability of winds and temperature in the Bergen area

NASA Astrophysics Data System (ADS)

Schönbein, Daniel; Ólafsson, Haraldur; Asle Olseth, Jan; Furevik, Birgitte

2017-04-01

In recent years, observations have been made by a dense network of automatic weather stations in the Bergen area in W-Norway (Bergen School of Meteorology). Here, cases are presented that feature large spatial variability in winds and temperature and the ability of a numerical model to reproduce this variability is assessed.

Simulating maize yield and biomass with spatial variability of soil field capacity

USDA-ARS?s Scientific Manuscript database

Spatial variability in field soil water and other properties is a challenge for system modelers who use only representative values for model inputs, rather than their distributions. In this study, we compared simulation results from a calibrated model with spatial variability of soil field capacity ...
Wake flowfields for Jovian probe

NASA Technical Reports Server (NTRS)

Engel, C. D.; Hair, L. M.

1980-01-01

The wake flow field developed by the Galileo probe as it enters the Jovian atmosphere was modeled. The wake produced by the probe is highly energetic, yielding both convective and radiative heat inputs to the base of the probe. A component mathematical model for the inviscid near and far wake, the viscous near and far wake, and near wake recirculation zone was developed. Equilibrium thermodynamics were used for both the ablation and atmospheric species. Flow fields for three entry conditions were calculated. The near viscous wave was found to exhibit a variable axial pressure distribution with the neck pressure approximately three times the base pressure. Peak wake flow field temperatures were found to be in proportion to forebody post shock temperatures.
Numerical investigation of CO{sub 2} emission and thermal stability of a convective and radiative stockpile of reactive material in a cylindrical pipe of variable thermal conductivity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lebelo, Ramoshweu Solomon, E-mail: sollyl@vut.ac.za

In this paper the CO{sub 2} emission and thermal stability in a long cylindrical pipe of combustible reactive material with variable thermal conductivity are investigated. It is assumed that the cylindrical pipe loses heat by both convection and radiation at the surface. The nonlinear differential equations governing the problem are tackled numerically using Runge-Kutta-Fehlberg method coupled with shooting technique method. The effects of various thermophysical parameters on the temperature and carbon dioxide fields, together with critical conditions for thermal ignition are illustrated and discussed quantitatively.
Predicting Martian dune shape and orientation from wind directional variability and sediment availability

NASA Astrophysics Data System (ADS)

Fernandez-Cascales, Laura; Lucas, Antoine; Rodriguez, Sébastien; Narteau, Clément; Spiga, Aymeric; Allemand, Pascal

2016-04-01

Dunes provide a unique set of information to constrain local climatic regimes on planetary bodies where there is no direct meteorological data. Wind directional variability and sediment availability are known to control the dune growth mechanism (i.e. the bed instability or fingering modes) and the subsequent dune shape and orientation (Courrech du Pont at al., 2014; Gao et al., 2015). Here we provide a quantitative analysis of these dependences on Mars using the output of the Martian General Circulation Models (GCM) and satellite imagery such as the Mars Reconnaissance Orbiter (MRO) Context Camera (CTX) images, at a selection of places where there is a high contrast between the dune material and the non-erodible ground. Dunes, mostly composed of unweathered basaltic and andesitic grains, appear dark, whereas the non-erodible ground has a higher albedo. Such a systematic contrast permits to link dune morphology to the local sediment cover. Dune shape, crest orientation and local sediment cover are extracted from CTX images using an automatic linear segment detection method and the local distribution in albedo. In zones of high sediment supply, dune crest alignments are close to the orientation of the bed instability mode predicted from the local winds from the Martian Climate Database (MCD) where is stored the outputs of the IPSL-GCM for Mars (Millour et al., 2014). Using the same wind data, in zones of low sediment supply, the crest angle is close to the orientation of the fingering mode. In addition, there are continuous transitions in dune shape and orientation as the dunes migrate from zone of high to low sediment availability. These results indicate that the prediction of the IPSL-GCM are in good agreement with the present dune shapes and orientations and shed new light on the dynamics of complex dune fields along sand flow path.
Direct Fusion Drive for a Human Mars Orbital Mission

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paluszek, Michael; Pajer, Gary; Razin, Yosef

2014-08-01

The Direct Fusion Drive (DFD) is a nuclear fusion engine that produces both thrust and electric power. It employs a field reversed configuration with an odd-parity rotating magnetic field heating system to heat the plasma to fusion temperatures. The engine uses deuterium and helium-3 as fuel and additional deuterium that is heated in the scrape-off layer for thrust augmentation. In this way variable exhaust velocity and thrust is obtained.
A Priori Analysis of a Compressible Flamelet Model using RANS Data for a Dual-Mode Scramjet Combustor

NASA Technical Reports Server (NTRS)

Quinlan, Jesse R.; Drozda, Tomasz G.; McDaniel, James C.; Lacaze, Guilhem; Oefelein, Joseph

2015-01-01

In an effort to make large eddy simulation of hydrocarbon-fueled scramjet combustors more computationally accessible using realistic chemical reaction mechanisms, a compressible flamelet/progress variable (FPV) model was proposed that extends current FPV model formulations to high-speed, compressible flows. Development of this model relied on observations garnered from an a priori analysis of the Reynolds-Averaged Navier-Stokes (RANS) data obtained for the Hypersonic International Flight Research and Experimentation (HI-FiRE) dual-mode scramjet combustor. The RANS data were obtained using a reduced chemical mechanism for the combustion of a JP-7 surrogate and were validated using avail- able experimental data. These RANS data were then post-processed to obtain, in an a priori fashion, the scalar fields corresponding to an FPV-based modeling approach. In the current work, in addition to the proposed compressible flamelet model, a standard incompressible FPV model was also considered. Several candidate progress variables were investigated for their ability to recover static temperature and major and minor product species. The effects of pressure and temperature on the tabulated progress variable source term were characterized, and model coupling terms embedded in the Reynolds- averaged Navier-Stokes equations were studied. Finally, results for the novel compressible flamelet/progress variable model were presented to demonstrate the improvement attained by modeling the effects of pressure and flamelet boundary conditions on the combustion.
Evolving Nonthermal Electron Distributions in Simulations of Sgr A*

NASA Astrophysics Data System (ADS)

Chael, Andrew; Narayan, Ramesh

2018-01-01

The accretion flow around Sagittarius A* (Sgr A*), the black hole at the Galactic Center, produces strong variability from the radio to X-rays on timescales of minutes to hours. This rapid, powerful variability is thought to be powered by energetic particle acceleration by plasma processes like magnetic reconnection and shocks. These processes can accelerate particles into non-thermal distributions which do not quickly isothermal in the low densities found around hot accretion flows. Current state-of-the-art simulations of accretion flows around black holes assume either a single-temperature gas or, at best, a two-temperature gas with thermal ions and electrons. We present results from incorporating the self-consistent evolution of a non-thermal electron population in a GRRMHD simulation of Sgr A*. The electron distribution is evolved across space, time, and Lorentz factor in parallel with background thermal ion, electron, and radiation fluids. Energy injection into the non-thermal distribution is modeled with a sub-grid prescription based on results from particle-in-cell simulations of magnetic reconnection. The energy distribution of the non-thermal electrons shows strong variability, and the spectral shape traces the complex interplay between the local viscous heating rate, magnetic field strength, and fluid velocity. Results from these simulations will be used in interpreting forthcoming data from the Event Horizon Telescope that resolves Sgr A*'s sub-mm variability in both time and space.
Single photon sources in 4H-SiC metal-oxide-semiconductor field-effect transistors

NASA Astrophysics Data System (ADS)

Abe, Y.; Umeda, T.; Okamoto, M.; Kosugi, R.; Harada, S.; Haruyama, M.; Kada, W.; Hanaizumi, O.; Onoda, S.; Ohshima, T.

2018-01-01

We present single photon sources (SPSs) embedded in 4H-SiC metal-oxide-semiconductor field-effect transistors (MOSFETs). They are formed in the SiC/SiO2 interface regions of wet-oxidation C-face 4H-SiC MOSFETs and were not found in other C-face and Si-face MOSFETs. Their bright room-temperature photoluminescence (PL) was observed in the range from 550 to 750 nm and revealed variable multi-peak structures as well as variable peak shifts. We characterized a wide variety of their PL spectra as the inevitable variation of local atomic structures at the interface. Their polarization dependence indicates that they are formed at the SiC side of the interface. We also demonstrate that it is possible to switch on/off the SPSs by a bias voltage of the MOSFET.
Biological and environmental rhythms in (dark) deep-sea hydrothermal ecosystems

NASA Astrophysics Data System (ADS)

Cuvelier, Daphne; Legendre, Pierre; Laës-Huon, Agathe; Sarradin, Pierre-Marie; Sarrazin, Jozée

2017-06-01

During 2011, two deep-sea observatories focusing on hydrothermal vent ecology were up and running in the Atlantic (Eiffel Tower, Lucky Strike vent field) and the Northeast Pacific Ocean (NEP) (Grotto, Main Endeavour Field). Both ecological modules recorded imagery and environmental variables jointly for a time span of 23 days (7-30 October 2011) and environmental variables for up to 9 months (October 2011-June 2012). Community dynamics were assessed based on imagery analysis and rhythms in temporal variation for both fauna and environment were revealed. Tidal rhythms were found to be at play in the two settings and were most visible in temperature and tubeworm appearances (at NEP). A ˜ 6 h lag in tidal rhythm occurrence was observed between Pacific and Atlantic hydrothermal vents, which corresponds to the geographical distance and time delay between the two sites.
Temperature Variability during Delirium in ICU Patients: An Observational Study

PubMed Central

van der Kooi, Arendina W.; Kappen, Teus H.; Raijmakers, Rosa J.; Zaal, Irene J.; Slooter, Arjen J. C.

2013-01-01

Introduction Delirium is an acute disturbance of consciousness and cognition. It is a common disorder in the intensive care unit (ICU) and associated with impaired long-term outcome. Despite its frequency and impact, delirium is poorly recognized by ICU-physicians and –nurses using delirium screening tools. A completely new approach to detect delirium is to use monitoring of physiological alterations. Temperature variability, a measure for temperature regulation, could be an interesting component to monitor delirium, but whether temperature regulation is different during ICU delirium has not yet been investigated. The aim of this study was to investigate whether ICU delirium is related to temperature variability. Furthermore, we investigated whether ICU delirium is related to absolute body temperature. Methods We included patients who experienced both delirium and delirium free days during ICU stay, based on the Confusion Assessment method for the ICU conducted by a research- physician or –nurse, in combination with inspection of medical records. We excluded patients with conditions affecting thermal regulation or therapies affecting body temperature. Daily temperature variability was determined by computing the mean absolute second derivative of the temperature signal. Temperature variability (primary outcome) and absolute body temperature (secondary outcome) were compared between delirium- and non-delirium days with a linear mixed model and adjusted for daily mean Richmond Agitation and Sedation Scale scores and daily maximum Sequential Organ Failure Assessment scores. Results Temperature variability was increased during delirium-days compared to days without delirium (βunadjusted=0.007, 95% confidence interval (CI)=0.004 to 0.011, p<0.001). Adjustment for confounders did not alter this result (βadjusted=0.005, 95% CI=0.002 to 0.008, p<0.001). Delirium was not associated with absolute body temperature (βunadjusted=-0.03, 95% CI=-0.17 to 0.10, p=0.61). This did not change after adjusting for confounders (βadjusted=-0.03, 95% CI=-0.17 to 0.10, p=0.63). Conclusions Our study suggests that temperature variability is increased during ICU delirium. PMID:24194955
Natural pixel decomposition for computational tomographic reconstruction from interferometric projection: algorithms and comparison

NASA Astrophysics Data System (ADS)

Cha, Don J.; Cha, Soyoung S.

1995-09-01

A computational tomographic technique, termed the variable grid method (VGM), has been developed for improving interferometric reconstruction of flow fields under ill-posed data conditions of restricted scanning and incomplete projection. The technique is based on natural pixel decomposition, that is, division of a field into variable grid elements. The performances of two algorithms, that is, original and revised versions, are compared to investigate the effects of the data redundancy criteria and seed element forming schemes. Tests of the VGMs are conducted through computer simulation of experiments and reconstruction of fields with a limited view angel of 90 degree(s). The temperature fields at two horizontal sections of a thermal plume of two interacting isothermal cubes, produced by a finite numerical code, are analyzed as test fields. The computer simulation demonstrates the superiority of the revised VGM to either the conventional fixed grid method or the original VGM. Both the maximum and average reconstruction errors are reduced appreciably. The reconstruction shows substantial improvement in the regions with dense scanning by probing rays. These regions are usually of interest in engineering applications.
Ambient temperature effect on pulse rate variability as an alternative to heart rate variability in young adult.

PubMed

Shin, Hangsik

2016-12-01

Pulse rate variability (PRV) is a promising physiological and analytic technique used as a substitute for heart rate variability (HRV). PRV is measured by pulse wave from various devices including mobile and wearable devices but HRV is only measured by an electrocardiogram (ECG). The purpose of this study was to evaluate PRV and HRV at various ambient temperatures and elaborate on the interchangeability of PRV and HRV. Twenty-eight healthy young subjects were enrolled in the experiment. We prepared temperature-controlled rooms and recorded the ECG and photoplethysmography (PPG) under temperature-controlled, constant humidity conditions. The rooms were kept at 17, 25, and 38 °C as low, moderate, and high ambient temperature environments, respectively. HRV and PRV were derived from the synchronized ECG and PPG measures and they were studied in time and frequency domain analysis for PRV/HRV ratio and pulse transit time (PTT). Similarity and differences between HRV and PRV were determined by a statistical analysis. PRV/HRV ratio analysis revealed that there was a significant difference between HRV and PRV for a given ambient temperature; this was with short-term variability measures such as SDNN SDSD or RMSSD, and HF-based variables including HF, LF/HF and normalized HF. In our analysis the absolute value of PTT was not significantly influenced by temperature. Standard deviation of PTT, however, showed significant difference not only between low and moderate temperatures but also between low and high temperatures. Our results suggest that ambient temperature induces a significant difference in PRV compared to HRV and that the difference becomes greater at a higher ambient temperature.
Stimulated single fiber electromyography in the mouse: techniques and normative data

NASA Technical Reports Server (NTRS)

Gooch, C. L.; Mosier, D. R.

2001-01-01

As the number of new transgenic mouse models of human neuromuscular disease continues to increase, the development of sophisticated electrophysiologic techniques for assessing the peripheral nervous system in these models has become important. Neuromuscular junction (NMJ) dysfunction, in particular, is often not detectable by morphologic or other techniques. To enable sensitive testing of murine NMJ function, we developed and tested a method for stimulated single fiber electromyography (S-SFEMG) in the gastrocnemius muscles of anesthetized mice. Jitter was assessed by measuring the mean consecutive latency difference (MCD) of single fiber responses to sciatic nerve stimulation at 2 HZ. Mean MCD values in normothermic mice were in the range of 6-8 micros for different strains, with no MCD values exceeding 25 micros. Reduced core temperature (to 29 degrees--30 degrees C) resulted in increased jitter, whereas intubation and mechanical ventilation of mice did not alter these values. Intraperitoneal and intravenous injection of vecuronium, however, resulted in progressively increased jitter followed by blocking in continuously monitored fibers. These observations validate the utility of S-SFEMG in mice as an index of NMJ function under a variety of physiologic conditions, and suggest that a high safety factor for neuromuscular transmission exists at mouse NMJs. Copyright 2001 John Wiley & Sons, Inc.
Antinociceptive, anti-inflammatory and toxicological evaluation of semi-synthetic molecules obtained from a benzyl-isothiocyanate isolated from Moringa oleifera Lam. in a temporomandibular joint inflammatory hypernociception model in rats.

PubMed

Dos Santos, Alain Oliveira; do Val, Danielle Rocha; da Silveira, Felipe Dantas; Gomes, Francisco Isaac Fernandes; Freitas, Hermany Capistrano; de Assis, Ellen Lima; de Almeida, Diana Kelly Castro; da Silva, Igor Iuco Castro; Barbosa, Francisco Geraldo; Mafezoli, Jair; da Silva, Marcos Reinaldo; de Castro Brito, Gerly Anne; Clemente-Napimoga, Juliana Trindade; de Paulo Teixera Pinto, Vicente de Paulo Teixeira; Filho, Gerardo Cristino; Bezerra, Mirna Marques; Chaves, Hellíada Vasconcelos

2018-02-01

Inflammation is a key component of many clinical conditions that affect the temporomandibular joint (TMJ) and Moringa oleifera Lam. has been used to treat inflammatory diseases. Here, we evaluated the toxicological effects on mice of a naturally-occurring isothiocyanate from M. oleifera and its seven analogue molecules. Further, the anti-nociceptive and anti-inflammatory effects on a rat model of TMJ inflammatory hypernociception were assessed. The systemic toxicological profile was determined in mice over a 14-day period: MC-1 1 μg/kg; MC-D1 1 μg/kg, MC-D3 100 μg/kg, MC-D6 1 μg/kg, MC-D7 1 μg/kg, MC-D8 1 μg/kg, MC-D9 10 μg/kg, and MC-H 1 μg/kg. The safest molecules were assayed for anti-nociceptive efficacy in the formalin (1.5%, 50 μL) and serotonin (255 mg) induced TMJ inflammatory hypernociception tests. The anti-inflammatory effect was evaluated through the vascular permeability assay using Evans blue. Further, the rota-rod test evaluated any motor impairment. Among the tested molecules, MC-D7, MC-D9, and MC-H were not toxic at the survival rate test, biochemical, and hystological analysis. They reduced the formalin-induced TMJ inflammatory hypernociception, but only MC-H decreased the serotonin-induced TMJ inflammation, suggesting an adrenergic receptor-dependent effect. They diminished the plasmatic extravasation, showing anti-inflammatory activity. At the rota-rod test, no difference was observed in comparison with control groups, reinforcing the hypothesis of anti-nociceptive effetc without motor impairment in animals. The analogues MC-D7, MC-D9, and MC-H were safe at the tested doses and efficient in reducing the formalin-induced TMJ hypernociception in rats. Our next steps include determining their mechanisms of anti-nociceptive action. Copyright © 2017 Elsevier Masson SAS. All rights reserved.
siRNA targeting mCD14 inhibits TNF-α, MIP-2, and IL-6 secretion and NO production from LPS-induced RAW264.7 cells.

PubMed

Lei, Ming; Jiao, Hanwei; Liu, Tao; Du, Li; Cheng, Ying; Zhang, Donglin; Hao, Yongchang; Man, Churiga; Wang, Fengyang

2011-10-01

Innate immunity plays a key role in protecting a host against invading microorganism, including Gram-negative bacteria. Cluster of differentiation antigen 14 (CD14) is an important innate immunity molecule, existing as a soluble (sCD14) and membrane-associated (mCD14) protein. Endotoxin [lipopolysaccharide (LPS)] is recognized as a key molecule in the pathogenesis of sepsis and septic shock caused by Gram negative bacteria. Emerging evidences indicate that upstream inhibition of bacterial LPS/Toll-like receptor 4(TLR4)/CD14-mediated inflammation pathway is an effective therapeutic approach for attenuating damaging immune activation. RNA interference (RNAi) provides a promising approach to down-regulate gene expression specifically. To explore the possibility of using RNAi against mCD14 as a strategy for inhibiting the secretion of cytokines and the nitric oxide (NO) production from LPS-activated RAW264.7 cells, four different short interfering RNA (siRNA) molecules corresponding to the sequence of mCD14 gene were designed and synthesized. We then tested the inhibition effects of these siRNA molecules on mCD14 expression by real-time quantitative RT-PCR and Western blot. After effective siRNA molecule (mCD14-siRNA-224), which is capable of reducing messenger RNA (mRNA) accumulation and protein expression of mCD14 specifically, was identified, RAW264.7 cells pretreated with mCD14-siRNA-224 were stimulated with LPS, and the secretion of tumor necrosis factor alpha (TNF-α), macrophage inflammatory protein-2 (MIP-2) and interleukin-6 (IL-6) and the NO production were evaluated. The results indicated that mCD14-siRNA-224 effectively inhibited TNF-α, MIP-2, and IL-6 release and NO production from LPS-stimulated RAW 264.7 cells by down-regulating mRNA accumulation and protein expression of mCD14 specifically. These findings provide useful information for the development of RNAi-based prophylaxis and therapy for endotoxin-related diseases.
Histopathological spectrum of childhood nephrotic syndrome in Indian children.

PubMed

Kumar, Jitendra; Gulati, Sanjeev; Sharma, Ajay Prakash; Sharma, Raj Kumar; Gupta, Ramesh Kumar

2003-07-01

Nephrotic syndrome in children is a clinical manifestation of different histopathological subtypes. There is a paucity of recent large studies dealing with the histopathological spectrum from developing countries. A prospective study was performed from January 1990 to December 2000 at our center, involving 600 children (with age of onset up to 16 years) with idiopathic nephrotic syndrome (INS). The objectives were: (1) to study the histopathological distribution of different subtypes of INS and (2) to compare the clinical and biochemical parameters at the time of diagnosis of minimal change disease (MCD) with non-MCD subtypes. For the purpose of this study we analyzed only those children with INS who underwent biopsies. The study group included 290 children in which adequate biopsy reports were available. There were 213 males and 77 females. Mean age at onset of INS was 7.9+5.1 years. Facial edema was found in 286 (98.6%), microhematuria in 120 (41.3%), gross hematuria in 7 (2.5%), and hypertension in 77(26.8%) patients. All patients of the study group were seronegative for HBsAg and HIV. Focal and segmental glomerulosclerosis (FSGS) was the most common histopathological subtype, occurring in 110 of 290 children (38%). Other subtypes included MCD in 95 children (32%), membranoproliferative glomerulonephritis (MPGN) in 44 children (15%), mesangioproliferative glomerulonephritis in 33 children (11%), membranous glomerulonephritis in 5 children (2%), and diffuse mesangial sclerosis in 3 children (1%). In children under 8 years of age, MCD was the most common entity, whereas FSGS predominated in children with age at onset greater than 8 years. The age at onset of nephrotic syndrome was significantly higher in the non-MCD group than the MCD group. The incidence of hypertension, microhematuria, and gross hematuria was significantly lower in the MCD group. MCD remains the most common histopathological subtype in Indian children with INS and onset under 8 years of age. The incidence of MPGN continues to be high. MCD can be differentiated from non-MCD subtype by younger age at onset, absence of hypertension, and absence of microscopic hematuria.
Variability and predictability of decadal mean temperature and precipitation over China in the CCSM4 last millennium simulation

NASA Astrophysics Data System (ADS)

Ying, Kairan; Frederiksen, Carsten S.; Zheng, Xiaogu; Lou, Jiale; Zhao, Tianbao

2018-02-01

The modes of variability that arise from the slow-decadal (potentially predictable) and intra-decadal (unpredictable) components of decadal mean temperature and precipitation over China are examined, in a 1000 year (850-1850 AD) experiment using the CCSM4 model. Solar variations, volcanic aerosols, orbital forcing, land use, and greenhouse gas concentrations provide the main forcing and boundary conditions. The analysis is done using a decadal variance decomposition method that identifies sources of potential decadal predictability and uncertainty. The average potential decadal predictabilities (ratio of slow-to-total decadal variance) are 0.62 and 0.37 for the temperature and rainfall over China, respectively, indicating that the (multi-)decadal variations of temperature are dominated by slow-decadal variability, while precipitation is dominated by unpredictable decadal noise. Possible sources of decadal predictability for the two leading predictable modes of temperature are the external radiative forcing, and the combined effects of slow-decadal variability of the Arctic oscillation (AO) and the Pacific decadal oscillation (PDO), respectively. Combined AO and PDO slow-decadal variability is associated also with the leading predictable mode of precipitation. External radiative forcing as well as the slow-decadal variability of PDO are associated with the second predictable rainfall mode; the slow-decadal variability of Atlantic multi-decadal oscillation (AMO) is associated with the third predictable precipitation mode. The dominant unpredictable decadal modes are associated with intra-decadal/inter-annual phenomena. In particular, the El Niño-Southern Oscillation and the intra-decadal variability of the AMO, PDO and AO are the most important sources of prediction uncertainty.
Paleoclimates: Understanding climate change past and present

USGS Publications Warehouse

Cronin, Thomas M.

2010-01-01

The field of paleoclimatology relies on physical, chemical, and biological proxies of past climate changes that have been preserved in natural archives such as glacial ice, tree rings, sediments, corals, and speleothems. Paleoclimate archives obtained through field investigations, ocean sediment coring expeditions, ice sheet coring programs, and other projects allow scientists to reconstruct climate change over much of earth's history. When combined with computer model simulations, paleoclimatic reconstructions are used to test hypotheses about the causes of climatic change, such as greenhouse gases, solar variability, earth's orbital variations, and hydrological, oceanic, and tectonic processes. This book is a comprehensive, state-of-the art synthesis of paleoclimate research covering all geological timescales, emphasizing topics that shed light on modern trends in the earth's climate. Thomas M. Cronin discusses recent discoveries about past periods of global warmth, changes in atmospheric greenhouse gas concentrations, abrupt climate and sea-level change, natural temperature variability, and other topics directly relevant to controversies over the causes and impacts of climate change. This text is geared toward advanced undergraduate and graduate students and researchers in geology, geography, biology, glaciology, oceanography, atmospheric sciences, and climate modeling, fields that contribute to paleoclimatology. This volume can also serve as a reference for those requiring a general background on natural climate variability.
Towards a More Biologically-meaningful Climate Characterization: Variability in Space and Time at Multiple Scales

NASA Astrophysics Data System (ADS)

Christianson, D. S.; Kaufman, C. G.; Kueppers, L. M.; Harte, J.

2013-12-01

Sampling limitations and current modeling capacity justify the common use of mean temperature values in summaries of historical climate and future projections. However, a monthly mean temperature representing a 1-km2 area on the landscape is often unable to capture the climate complexity driving organismal and ecological processes. Estimates of variability in addition to mean values are more biologically meaningful and have been shown to improve projections of range shifts for certain species. Historical analyses of variance and extreme events at coarse spatial scales, as well as coarse-scale projections, show increasing temporal variability in temperature with warmer means. Few studies have considered how spatial variance changes with warming, and analysis for both temporal and spatial variability across scales is lacking. It is unclear how the spatial variability of fine-scale conditions relevant to plant and animal individuals may change given warmer coarse-scale mean values. A change in spatial variability will affect the availability of suitable habitat on the landscape and thus, will influence future species ranges. By characterizing variability across both temporal and spatial scales, we can account for potential bias in species range projections that use coarse climate data and enable improvements to current models. In this study, we use temperature data at multiple spatial and temporal scales to characterize spatial and temporal variability under a warmer climate, i.e., increased mean temperatures. Observational data from the Sierra Nevada (California, USA), experimental climate manipulation data from the eastern and western slopes of the Rocky Mountains (Colorado, USA), projected CMIP5 data for California (USA) and observed PRISM data (USA) allow us to compare characteristics of a mean-variance relationship across spatial scales ranging from sub-meter2 to 10,000 km2 and across temporal scales ranging from hours to decades. Preliminary spatial analysis at fine-spatial scales (sub-meter to 10-meter) shows greater temperature variability with warmer mean temperatures. This is inconsistent with the inherent assumption made in current species distribution models that fine-scale variability is static, implying that current projections of future species ranges may be biased -- the direction and magnitude requiring further study. While we focus our findings on the cross-scaling characteristics of temporal and spatial variability, we also compare the mean-variance relationship between 1) experimental climate manipulations and observed conditions and 2) temporal versus spatial variance, i.e., variability in a time-series at one location vs. variability across a landscape at a single time. The former informs the rich debate concerning the ability to experimentally mimic a warmer future. The latter informs space-for-time study design and analyses, as well as species persistence via a combined spatiotemporal probability of suitable future habitat.
Does Moral Case Deliberation Help Professionals in Care for the Homeless in Dealing with Their Dilemmas? A Mixed-Methods Responsive Study.

PubMed

Spijkerboer, R P; van der Stel, J C; Widdershoven, G A M; Molewijk, A C

2017-03-01

Health care professionals often face moral dilemmas. Not dealing constructively with moral dilemmas can cause moral distress and can negatively affect the quality of care. Little research has been documented with methodologies meant to support professionals in care for the homeless in dealing with their dilemmas. Moral case deliberation (MCD) is a method for systematic reflection on moral dilemmas and is increasingly being used as ethics support for professionals in various health-care domains. This study deals with the question: What is the contribution of MCD in helping professionals in an institution for care for the homeless to deal with their moral dilemmas? A mixed-methods responsive evaluation design was used to answer the research question. Five teams of professionals from a Dutch care institution for the homeless participated in MCD three times. Professionals in care for the homeless value MCD positively. They report that MCD helped them to identify the moral dilemma/question, and that they learned from other people's perspectives while reflecting and deliberating on the values at stake in the dilemma or moral question. They became aware of the moral dimension of moral dilemmas, of related norms and values, of other perspectives, and learned to formulate a moral standpoint. Some experienced the influence of MCD in the way they dealt with moral dilemmas in daily practice. Half of the professionals expect MCD will influence the way they deal with moral dilemmas in the future. Most of them were in favour of further implementation of MCD in their organization.

The effect of luminous intensity on the attraction of phlebotomine sand flies to light traps.

PubMed

Lima-Neto, Abdias R; Costa-Neta, Benedita M; da Silva, Apoliana Araújo; Brito, Jefferson M; Aguiar, João V C; Ponte, Islana S; Silva, Francinaldo S

2018-05-04

To improve the efficiency of light traps in collecting phlebotomine sand flies, the potential effects of luminous intensity on the attraction of these insects to traps were evaluated. Sand flies were collected with Hooper Pugedo (HP) light traps fitted with 5-mm light-emitting diodes (LED) bulbs: green (520 nm wavelength-10,000, 15,000 and 20,000 millicandela (mcd) and blue (470 nm-4,000, 12,000 and 15,000 mcd). A total of 3,264 sand flies comprising 13 species were collected. The collected species were Lutzomyia longipalpis (Lutz & Neiva) (Diptera: Psychodidae) (52.48%), Evandromyia evandroi (Costa Lima & Antunes, 1939) (Diptera: Psychodidae) (32.90%) and Micropygomyia goiana (Martins, Falcão, & Silva) (Diptera: Psychodidae) (9.76%). An increase in luminous intensity of the LEDs increased the size of the sand fly catch. The lower luminous intensity of green (10,000 mcd) attracted an average of 13.7 ± 2.8 sand flies/trap per night and the other luminous intensities accounted for a mean of 24.1 ± 4.0 (15,000 mcd) and 28.2 ± 5.0 (20,000 mcd) sand flies/trap per night. Regarding the blue wavelength, the lower luminous intensity (4,000 mcd) attracted an average of 27.4 ± 4.1 sand flies/trap per night, followed by 12,000 mcd (37.6 ± 8.7) and 15,000 mcd (40.5 ± 7.3). Based on our data, the luminous intensity of light traps should be considered when developing light traps for monitoring or controlling phlebotomine sand flies.
The relationship between sea surface temperature and chlorophyll concentration of phytoplanktons in the Black Sea using remote sensing techniques.

PubMed

Kavak, Mehmet Tahir; Karadogan, Sabri

2012-04-01

Present work investigated the relationship between Chlorophyll (Chl), of phytoplankton biomass, and sea surface temperature (SST) of the Black Sea, using Sea-viewing Wide Field-of-view Sensor (SeaWiFS) and Advanced Very High Resolution Radiometer (AVHRR) satellite imagery. Satellite derived data could provide information on the amount of sea life present (Brown algae, called kelp, proliferate, supporting new species of sea life, including otters, fish, and various invertebrates) in a given area throughout the world. SST from AVHRR from 1993 to 2008 showed seasonal, annual and interannual variability of temperature, monthly variability Chl from SeaWiFS from 1997 to 2009 has also been investigated. Chl showed two high peaks for the year 1999 and 2008. The correlation between SST and Chl for the same time has been found to be 60%. Correlation was significant at p<0.05. The information could also be useful in connection with studies of global changes in temperature and what effect they could have on the total abundance of marine life.
An improved empirical dynamic control system model of global mean sea level rise and surface temperature change

NASA Astrophysics Data System (ADS)

Wu, Qing; Luu, Quang-Hung; Tkalich, Pavel; Chen, Ge

2018-04-01

Having great impacts on human lives, global warming and associated sea level rise are believed to be strongly linked to anthropogenic causes. Statistical approach offers a simple and yet conceptually verifiable combination of remotely connected climate variables and indices, including sea level and surface temperature. We propose an improved statistical reconstruction model based on the empirical dynamic control system by taking into account the climate variability and deriving parameters from Monte Carlo cross-validation random experiments. For the historic data from 1880 to 2001, we yielded higher correlation results compared to those from other dynamic empirical models. The averaged root mean square errors are reduced in both reconstructed fields, namely, the global mean surface temperature (by 24-37%) and the global mean sea level (by 5-25%). Our model is also more robust as it notably diminished the unstable problem associated with varying initial values. Such results suggest that the model not only enhances significantly the global mean reconstructions of temperature and sea level but also may have a potential to improve future projections.
The First Pan-Starrs Medium Deep Field Variable Star Catalog

NASA Astrophysics Data System (ADS)

Flewelling, Heather

2013-01-01

We present the first Pan-Starrs 1 Medium Deep Field Variable Star Catalog (PS1-MDF-VSC). The Pan-Starrs 1 (PS1) telescope is a 1.8 meter survey telescope with a 1.4 Gigapixel camera, and is located in Haleakala, Hawaii. The Medium Deep survey, which consists of 10 fields located uniformly across the sky, totalling 70 square degrees, is observed each night, in 2-3 filters per field, with 8 exposures per filter. We have located and classified several hundred periodic variable stars within the Medium Deep fields, and we present the first catalog listing the properties of these variable stars.
Change in the magnitude and mechanisms of global temperature variability with warming

PubMed Central

Brown, Patrick T.; Ming, Yi; Li, Wenhong; Hill, Spencer A.

2017-01-01

Natural unforced variability in global mean surface air temperature (GMST) can mask or exaggerate human-caused global warming, and thus a complete understanding of this variability is highly desirable. Significant progress has been made in elucidating the magnitude and physical origins of present-day unforced GMST variability, but it has remained unclear how such variability may change as the climate warms. Here we present modeling evidence that indicates that the magnitude of low-frequency GMST variability is likely to decline in a warmer climate and that its generating mechanisms may be fundamentally altered. In particular, a warmer climate results in lower albedo at high latitudes, which yields a weaker albedo feedback on unforced GMST variability. These results imply that unforced GMST variability is dependent on the background climatological conditions, and thus climate model control simulations run under perpetual preindustrial conditions may have only limited relevance for understanding the unforced GMST variability of the future. PMID:29391875
Root-zone temperature and nitrogen affect the yield and secondary metabolite concentration of fall- and spring-grown, high-density leaf lettuce.

PubMed

Bumgarner, Natalie R; Scheerens, Joseph C; Mullen, Robert W; Bennett, Mark A; Ling, Peter P; Kleinhenz, Matthew D

2012-01-15

Understanding the effects of temperature and nitrogen levels on key variables, particularly under field conditions during cool seasons of temperate climates, is important. Here, we document the impact of root-zone heating and nitrogen (N) fertility on the accumulation and composition of fall- and spring-grown lettuce biomass. A novel, scalable field system was employed. Direct-seeded plots containing a uniform, semi-solid, and nearly stable rooting medium were established outdoors in 2009 and 2010; each contained one of eight combinations of root-zone heating (-/+) and N fertility (0, 72, 144, and 576 mg day(-1)). Root-zone heating increased but withholding N decreased biomass accumulation in both years. Low N supplies were also associated with greater anthocyanin and total antioxidant power but lower N and phosphorus levels. Tissue chlorophyll a and vitamin C levels tracked root-zone temperature and N fertility more closely in 2009 and 2010, respectively. Experimentally imposed root-zone temperature and N levels influenced the amount and properties of fall- and spring-grown lettuce tissue. Ambient conditions, however, dictated which of these factors exerted the greatest effect on the variables measured. Collectively, the results point to the potential for gains in system sustainability and productivity, including with respect to supplying human nutritional units. Copyright © 2011 Society of Chemical Industry.
A Solar-Blind UV Detector Based on Graphene-Microcrystalline Diamond Heterojunctions.

PubMed

Wei, Minsong; Yao, Kaiyuan; Liu, Yumeng; Yang, Chen; Zang, Xining; Lin, Liwei

2017-09-01

An ultraviolet detector is demonstrated through a whole-wafer, thin diamond film transfer process to realize the heterojunction between graphene and microcrystalline diamond (MCD). Conventional direct transfer processes fail to deposit graphene onto the top surface of the MCD film. However, it is found that the 2 µm thick MCD diamond film can be easily peeled off from the growth silicon substrate to expose its smooth backside for the graphene transfer process for high-quality graphene/MCD heterojunctions. A vertical graphene/MCD/metal structure is constructed as the photodiode device using graphene as the transparent top electrode for solar-blind ultraviolet sensing with high responsivity and gain factor. As such, this material system and device architecture could serve as the platform for next-generation optoelectronic systems. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
Linear dynamical modes as new variables for data-driven ENSO forecast

NASA Astrophysics Data System (ADS)

Gavrilov, Andrey; Seleznev, Aleksei; Mukhin, Dmitry; Loskutov, Evgeny; Feigin, Alexander; Kurths, Juergen

2018-05-01

A new data-driven model for analysis and prediction of spatially distributed time series is proposed. The model is based on a linear dynamical mode (LDM) decomposition of the observed data which is derived from a recently developed nonlinear dimensionality reduction approach. The key point of this approach is its ability to take into account simple dynamical properties of the observed system by means of revealing the system's dominant time scales. The LDMs are used as new variables for empirical construction of a nonlinear stochastic evolution operator. The method is applied to the sea surface temperature anomaly field in the tropical belt where the El Nino Southern Oscillation (ENSO) is the main mode of variability. The advantage of LDMs versus traditionally used empirical orthogonal function decomposition is demonstrated for this data. Specifically, it is shown that the new model has a competitive ENSO forecast skill in comparison with the other existing ENSO models.
Ground-base multicolour photometry of NGC 6811

NASA Astrophysics Data System (ADS)

Ocando, S.; Martín-Ruiz, S.; Rodríguez, E.

2017-03-01

NGC 6811 is one of the four open clusters in the field of view of the Kepler space mission. Among its members there are several known pulsating A-F stars of the δ Scuti, γ Doradus, and hybrid type, which makes this cluster a very interesting object to study its pulsational content. During the summers of 2013 and 2014 we performed an extensive observational campaign using the 1.5 m telescope at the Sierra Nevada Observatory and multicolour photometry. New pulsating variables candidates were detected in this work. We fulfilled a frequency analysis for the known variables, with very good agreement with previous results. By using Str ̈omgren photometry we were able to obtain the main physical parameters of the stars such as temperature, surface gravity, metallicity and luminosity. We have also determined the corresponding frequency phase-shifts and amplitude ratios between different filters as a first step to identify the pulsational modes of the variables.
Effects of variable electrical conductivity and thermal conductivity on unsteady MHD free convection flow past an exponential accelerated inclined plate

NASA Astrophysics Data System (ADS)

Rana, B. M. Jewel; Ahmed, Rubel; Ahmmed, S. F.

2017-06-01

An analysis is carried out to investigate the effects of variable viscosity, thermal radiation, absorption of radiation and cross diffusion past an inclined exponential accelerated plate under the influence of variable heat and mass transfer. A set of suitable transformations has been used to obtain the non-dimensional coupled governing equations. Explicit finite difference technique has been used to solve the obtained numerical solutions of the present problem. Stability and convergence of the finite difference scheme have been carried out for this problem. Compaq Visual Fortran 6.6a has been used to calculate the numerical results. The effects of various physical parameters on the fluid velocity, temperature, concentration, coefficient of skin friction, rate of heat transfer, rate of mass transfer, streamlines and isotherms on the flow field have been presented graphically and discussed in details.
Nonlinear conductivity in silicon nitride

NASA Astrophysics Data System (ADS)

Tuncer, Enis

2017-08-01

To better comprehend electrical silicon-package interaction in high voltage applications requires full characterization of the electrical properties of dielectric materials employed in wafer and package level design. Not only the packaging but wafer level dielectrics, i.e. passivation layers, would experience high electric fields generated by the voltage applied pads. In addition the interface between the passivation layer and a mold compound might develop space charge because of the mismatch in electrical properties of the materials. In this contribution electrical properties of a thin silicon nitride (Si3N4) dielectric is reported as a function of temperature and electric field. The measured values later analyzed using different temperature dependent exponential expressions and found that the Mott variable range hopping conduction model was successful to express the data. A full temperature/electric field dependency of conductivity is generated. It was found that the conduction in Si3N4 could be expressed like a field ionization or Fowler-Nordheim mechanism.
Variability of the western Galician upwelling system (NW Spain) during an intensively sampled annual cycle. An EOF analysis approach

NASA Astrophysics Data System (ADS)

Herrera, J. L.; Rosón, G.; Varela, R. A.; Piedracoba, S.

2008-07-01

The key features of the western Galician shelf hydrography and dynamics are analyzed on a solid statistical and experimental basis. The results allowed us to gather together information dispersed in previous oceanographic works of the region. Empirical orthogonal functions analysis and a canonical correlation analysis were applied to a high-resolution dataset collected from 47 surveys done on a weekly frequency from May 2001 to May 2002. The main results of these analyses are summarized bellow. Salinity, temperature and the meridional component of the residual current are correlated with the relevant local forcings (the meridional coastal wind component and the continental run-off) and with a remote forcing (the meridional temperature gradient at latitude 37°N). About 80% of the salinity and temperature total variability over the shelf, and 37% of the residual meridional current total variability are explained by two EOFs for each variable. Up to 22% of the temperature total variability and 14% of the residual meridional current total variability is devoted to the set up of cross-shore gradients of the thermohaline properties caused by the wind-induced Ekman transport. Up to 11% and 10%, respectively, is related to the variability of the meridional temperature gradient at the Western Iberian Winter Front. About 30% of the temperature total variability can be explained by the development and erosion of the seasonal thermocline and by the seasonal variability of the thermohaline properties of the central waters. This thermocline presented unexpected low salinity values due to the trapping during spring and summer of the high continental inputs from the River Miño recorded in 2001. The low salinity plumes can be traced on the Galician shelf during almost all the annual cycle; they tend to be extended throughout the entire water column under downwelling conditions and concentrate in the surface layer when upwelling favourable winds blow. Our evidences point to the meridional temperature gradient acting as an important controlling factor of the central waters thermohaline properties and in the development and decay of the Iberian Poleward Current.
Hepatic effects of a methionine-choline-deficient diet in hepatocyte RXR{alpha}-null mice

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gyamfi, Maxwell Afari; Tanaka, Yuji; He Lin

Retinoid X receptor-{alpha} (RXR{alpha}) is an obligate partner for several nuclear hormone receptors that regulate important physiological processes in the liver. In this study the impact of hepatocyte RXR{alpha} deficiency on methionine and choline deficient (MCD) diet-induced steatosis, oxidative stress, inflammation, and hepatic transporters gene expression were examined. The mRNA of sterol regulatory element-binding protein (SREBP)-regulated genes, important for lipid synthesis, were not altered in wild type (WT) mice, but were increased 2.0- to 5.4-fold in hepatocyte RXR{alpha}-null (H-RXR{alpha}-null) mice fed a MCD diet for 14 days. Furthermore, hepatic mRNAs and proteins essential for fatty acid {beta}-oxidation were not alteredmore » in WT mice, but were decreased in the MCD diet-fed H-RXR{alpha}-null mice, resulting in increased hepatic free fatty acid levels. Cyp2e1 enzyme activity and lipid peroxide levels were induced only in MCD-fed WT mice. In contrast, hepatic mRNA levels of pro-inflammatory factors were increased only in H-RXR{alpha}-null mice fed the MCD diet. Hepatic uptake transporters Oatp1a1 and Oatp1b2 mRNA levels were decreased in WT mice fed the MCD diet, whereas the efflux transporter Mrp4 was increased. However, in the H-RXR{alpha}-null mice, the MCD diet only moderately decreased Oatp1a1 and induced both Oatp1a4 and Mrp4 gene expression. Whereas the MCD diet increased serum bile acid levels and alkaline phosphatase activity in both WT and H-RXR{alpha}-null mice, serum ALT levels were induced (2.9-fold) only in the H-RXR{alpha}-null mice. In conclusion, these data suggest a critical role for RXR{alpha} in hepatic fatty acid homeostasis and protection against MCD-induced hepatocyte injury.« less
Analysis of Accuracy of Modis BRDF Product (MCD43 C6) Based on Misr Land Surface Brf Product - a Case Study of the Central Part of Northeast Asia

NASA Astrophysics Data System (ADS)

Li, J.; Chen, S.; Qin, W.; Murefu, M.; Wang, Y.; Yu, Y.; Zhen, Z.

2018-04-01

EOS/MODIS land surface Bi-directional Reflectance Distribution Function (BRDF) product (MCD43), with the latest version C6, is one of the most important operational BRDF products with global coverage. The core sub-product MCD43A1 stores 3 parameters of the RossThick-LiSparseR semi-empirical kernel-driven BRDF model. It is important for confident use of the product to evaluate the accuracy of bi-directional reflectance factor (BRF) predicted by MCD43A1 BRDF model (mBRF). A typical region in the central part of Northeast Asia is selected as the study area. The performance of MCD43A1 BRDF model is analyzed in various observation geometries and phenological phases, using Multi-angle Imaging SpectroRadiometer (MISR) land-surface reflectance factor product (MILS_BRF) as the reference data. In addition, MODIS products MCD12Q1 and MOD/MYD10A1 are used to evaluate the impacts of land cover types and snow covers on the model accuracy, respectively. The results show an overall excellent performance of MCD43A1 in representing the anisotropic reflectance of land surface, with root mean square error (RMSE) of 0.0262 and correlation coefficient (R) of 0.9537, for all available comparable samples of MILS_BRF and mBRF pairs. The model accuracy varies in different months, which is related to the phenological phases of the study area. The accuracy for pixels labelled as `snow' by MCD43 is obviously low, with RMSE/R of 0.0903/0.8401. Ephemeral snowfall events further decrease the accuracy, with RMSE/R of 0.1001/0.7715. These results provide meaningful information to MCD43 users, especially those, whose study regions are subject to phenological cycles as well as snow cover and change.
Opium addiction as an independent risk factor for coronary microvascular dysfunction: A case-control study of 250 consecutive patients with slow-flow angina.

PubMed

Esmaeili Nadimi, Ali; Pour Amiri, Farah; Sheikh Fathollahi, Mahmood; Hassanshahi, Gholamhossien; Ahmadi, Zahra; Sayadi, Ahmad Reza

2016-09-15

Approximately 20% to 30% of patients who undergo coronary angiography for assessment of typical cardiac chest pain display microvascular coronary dysfunction (MCD). This study aimed to determine potential relationships between baseline clinical characteristics and likelihood of MCD diagnosis in a large group of patients with stable angina symptoms, positive exercise test and angiographic ally normal epicardial coronary arteries. This cross-sectional study included 250 Iranian with documented evidence of cardiac ischemia on exercise testing, class I or II indication for coronary angiography, and either: (1) angiographically normal coronary arteries and diagnosis of MCD with slow-flow phenomenon, or (2) normal angiogram and no evidence of MCD. All patients completed a questionnaire designed to capture key data including clinical demographics, past medical history, and social factors. Data was evaluated using single and multivariable logistic regression models to identify potential individual patient factors that might help to predict a diagnosis of MCD. 125 (11.2% of total) patients were subsequently diagnosed with MCD. 125 consecutive control subjects were selected for comparison. The mean age was similar among the two groups (52.38 vs. 53.26%, p=ns), but there was a higher proportion of men in the study group compared to control (42.4 vs. 27.2%, p=0.012). No significant relationships were observed between traditional cardiovascular risk factors (diabetes, hypertension, and dyslipidemia) or body mass index (BMI), and likelihood of MCD diagnosis. However, opium addiction was found to be an independent predictor of MCD on single and multivariable logistic regression model (OR=3.575, 95%CI: 1.418-9.016; p=0.0069). We observed a significant relationship between opium addiction and microvascular angina. This novel finding provides a potential mechanistic insight into the pathogenesis of MCD with slow-flow phenomenon. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.
Variability of Soil Temperature: A Spatial and Temporal Analysis.

ERIC Educational Resources Information Center

Walsh, Stephen J.; And Others

1991-01-01

Discusses an analysis of the relationship of soil temperatures at 3 depths to various climatic variables along a 200-kilometer transect in west-central Oklahoma. Reports that temperature readings increased from east to west. Concludes that temperature variations were explained by a combination of spatial, temporal, and biophysical factors. (SG)
Soil temperature variability in complex terrain measured using fiber-optic distributed temperature sensing

USDA-ARS?s Scientific Manuscript database

Soil temperature (Ts) exerts critical controls on hydrologic and biogeochemical processes but magnitude and nature of Ts variability in a landscape setting are rarely documented. Fiber optic distributed temperature sensing systems (FO-DTS) potentially measure Ts at high density over a large extent. ...
A Peltier-based variable temperature source

NASA Astrophysics Data System (ADS)

Molki, Arman; Roof Baba, Abdul

2014-11-01

In this paper we propose a simple and cost-effective variable temperature source based on the Peltier effect using a commercially purchased thermoelectric cooler. The proposed setup can be used to quickly establish relatively accurate dry temperature reference points, which are necessary for many temperature applications such as thermocouple calibration.
[Application of regression tree in analyzing the effects of climate factors on NDVI in loess hilly area of Shaanxi Province].

PubMed

Liu, Yang; Lü, Yi-he; Zheng, Hai-feng; Chen, Li-ding

2010-05-01

Based on the 10-day SPOT VEGETATION NDVI data and the daily meteorological data from 1998 to 2007 in Yan' an City, the main meteorological variables affecting the annual and interannual variations of NDVI were determined by using regression tree. It was found that the effects of test meteorological variables on the variability of NDVI differed with seasons and time lags. Temperature and precipitation were the most important meteorological variables affecting the annual variation of NDVI, and the average highest temperature was the most important meteorological variable affecting the inter-annual variation of NDVI. Regression tree was very powerful in determining the key meteorological variables affecting NDVI variation, but could not build quantitative relations between NDVI and meteorological variables, which limited its further and wider application.
Unmanned aerial system nadir reflectance and MODIS nadir BRDF-adjusted surface reflectances intercompared over Greenland

NASA Astrophysics Data System (ADS)

Faulkner Burkhart, John; Kylling, Arve; Schaaf, Crystal B.; Wang, Zhuosen; Bogren, Wiley; Storvold, Rune; Solbø, Stian; Pedersen, Christina A.; Gerland, Sebastian

2017-07-01

Albedo is a fundamental parameter in earth sciences, and many analyses utilize the Moderate Resolution Imaging Spectroradiometer (MODIS) bidirectional reflectance distribution function (BRDF)/albedo (MCD43) algorithms. While derivative albedo products have been evaluated over Greenland, we present a novel, direct comparison with nadir surface reflectance collected from an unmanned aerial system (UAS). The UAS was flown from Summit, Greenland, on 210 km transects coincident with the MODIS sensor overpass on board the Aqua and Terra satellites on 5 and 6 August 2010. Clear-sky acquisitions were available from the overpasses within 2 h of the UAS flights. The UAS was equipped with upward- and downward-looking spectrometers (300-920 nm) with a spectral resolution of 10 nm, allowing for direct integration into the MODIS bands 1, 3, and 4. The data provide a unique opportunity to directly compare UAS nadir reflectance with the MODIS nadir BRDF-adjusted surface reflectance (NBAR) products. The data show UAS measurements are slightly higher than the MODIS NBARs for all bands but agree within their stated uncertainties. Differences in variability are observed as expected due to different footprints of the platforms. The UAS data demonstrate potentially large sub-pixel variability of MODIS reflectance products and the potential to explore this variability using the UAS as a platform. It is also found that, even at the low elevations flown typically by a UAS, reflectance measurements may be influenced by haze if present at and/or below the flight altitude of the UAS. This impact could explain some differences between data from the two platforms and should be considered in any use of airborne platforms.

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