Sample records for vegetative cell pattern
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Wikramanayake, Athula H.; Huang, Ling; Klein, William H.
1998-01-01
In sea urchin embryos, the animal-vegetal axis is specified during oogenesis. After fertilization, this axis is patterned to produce five distinct territories by the 60-cell stage. Territorial specification is thought to occur by a signal transduction cascade that is initiated by the large micromeres located at the vegetal pole. The molecular mechanisms that mediate the specification events along the animal–vegetal axis in sea urchin embryos are largely unknown. Nuclear β-catenin is seen in vegetal cells of the early embryo, suggesting that this protein plays a role in specifying vegetal cell fates. Here, we test this hypothesis and show that β-catenin is necessary for vegetal plate specification and is also sufficient for endoderm formation. In addition, we show that β-catenin has pronounced effects on animal blastomeres and is critical for specification of aboral ectoderm and for ectoderm patterning, presumably via a noncell-autonomous mechanism. These results support a model in which a Wnt-like signal released by vegetal cells patterns the early embryo along the animal–vegetal axis. Our results also reveal similarities between the sea urchin animal–vegetal axis and the vertebrate dorsal–ventral axis, suggesting that these axes share a common evolutionary origin. PMID:9689082
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Ishikawa, Akira; Hattori, Mayuko; Ishii, Ken-Ichiro; Kulis, David M.; Anderson, Donald M.; Imai, Ichiro
2014-01-01
Temporal changes in the in situ germination flux of cysts and the abundance of vegetative cells of the toxic dinoflagellate Alexandrium catenella were investigated in Ago Bay, central Japan from July 2003 to December 2004. The in situ germination flux (cells m−2 day−1) was measured using ‘plankton emergence trap/chambers (PET chambers)’. Germination of the cysts in the sediments occurred continuously during the study, ranging from 52 to 1753 cells m−2 day−1, with no temporal trend. This germination pattern appeared to be promoted by a short mandatory dormancy period for newly formed cysts coupled with a broad temperature window for germination. For the vegetative populations, high abundances (>105 cells m−2) were recorded in the water column from spring to summer and from autumn to early winter. The size of the vegetative populations did not correlate with the cyst germination flux but rather larger vegetative populations were often observed when the water temperature was around 20°C, indicating that bloom development was mainly regulated by the temperature. Nonetheless, the continuous germination pattern of A. catenella is advantageous enabling the germinated cells to immediately exploit favorable bloom conditions. PMID:25221373
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Phytoplasmal infection derails genetically preprogrammed meristem fate and alters plant architecture
Wei, Wei; Davis, Robert Edward; Nuss, Donald L.; Zhao, Yan
2013-01-01
In the life cycle of higher plants, it is the fate of meristem cells that determines the pattern of growth and development, and therefore plant morphotype and fertility. Floral transition, the turning point from vegetative growth to reproductive development, is achieved via genetically programmed sequential changes in meristem fate from vegetative to inflorescence, and to floral, leading to flower formation and eventual seed production. The transition is rarely reversible once initiated. In this communication, we report that a bacterial infection can derail the genetically programmed fate of meristem cells, thereby drastically altering the growth pattern of the host plant. We identified four characteristic symptoms in tomato plants infected with a cell wall-less bacterium, phytoplasma. The symptoms are a manifestation of the pathogen-induced alterations of growth pattern, whereas each symptom corresponds to a distinct phase in the derailment of shoot apical meristem fate. The phases include premature floral meristem termination, suppressed floral meristem initiation, delayed conversion of vegetative meristem to inflorescence meristem, and repetitive initiation and outgrowth of lateral vegetative meristems. We further found that the pathogen-induced alterations of growth pattern were correlated with transcriptional reprogramming of key meristem switching genes. Our findings open an avenue toward understanding pathological alterations in patterns of plant growth and development, thus aiding identification of molecular targets for disease control and symptom alleviation. The findings also provide insights for understanding stem cell pluripotency and raise a tantalizing possibility for using phytoplasma as a tool to dissect the course of normal plant development and to modify plant morphogenesis by manipulating meristem fate. PMID:24191032
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Peng, ChiehFu Jeff; Wikramanayake, Athula H.
2013-01-01
Pattern formation along the animal-vegetal (AV) axis in sea urchin embryos is initiated when canonical Wnt (cWnt) signaling is activated in vegetal blastomeres. The mechanisms that restrict cWnt signaling to vegetal blastomeres are not well understood, but there is increasing evidence that the egg’s vegetal cortex plays a critical role in this process by mediating localized “activation” of Disheveled (Dsh). To investigate how Dsh activity is regulated along the AV axis, sea urchin-specific Dsh antibodies were used to examine expression, subcellular localization, and post-translational modification of Dsh during development. Dsh is broadly expressed during early sea urchin development, but immunolocalization studies revealed that this protein is enriched in a punctate pattern in a novel vegetal cortical domain (VCD) in the egg. Vegetal blastomeres inherit this VCD during embryogenesis, and at the 60-cell stage Dsh puncta are seen in all cells that display nuclear β-catenin. Analysis of Dsh post-translational modification using two-dimensional Western blot analysis revealed that compared to Dsh pools in the bulk cytoplasm, this protein is differentially modified in the VCD and in the 16-cell stage micromeres that partially inherit this domain. Dsh localization to the VCD is not directly affected by disruption of microfilaments and microtubules, but unexpectedly, microfilament disruption led to degradation of all the Dsh pools in unfertilized eggs over a period of incubation suggesting that microfilament integrity is required for maintaining Dsh stability. These results demonstrate that a pool of differentially modified Dsh in the VCD is selectively inherited by the vegetal blastomeres that activate cWnt signaling in early embryos, and suggests that this domain functions as a scaffold for localized Dsh activation. Localized cWnt activation regulates AV axis patterning in many metazoan embryos. Hence, it is possible that the VCD is an evolutionarily conserved cytoarchitectural domain that specifies the AV axis in metazoan ova. PMID:24236196
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The vegetation outlook (VegOut): a new method for predicting vegetation seasonal greenness
Tadesse, T.; Wardlow, B.; Hayes, M.; Svoboda, M.; Brown, J.
2010-01-01
The vegetation outlook (VegOut) is a geospatial tool for predicting general vegetation condition patterns across large areas. VegOut predicts a standardized seasonal greenness (SSG) measure, which represents a general indicator of relative vegetation health. VegOut predicts SSG values at multiple time steps (two to six weeks into the future) based on the analysis of "historical patterns" (i.e., patterns at each 1 km grid cell and time of the year) of satellite, climate, and oceanic data over an 18-year period (1989 to 2006). The model underlying VegOut capitalizes on historical climate-vegetation interactions and ocean-climate teleconnections (such as El Niño and the Southern Oscillation, ENSO) expressed over the 18-year data record and also considers several environmental characteristics (e.g., land use/cover type and soils) that influence vegetation's response to weather conditions to produce 1 km maps that depict future general vegetation conditions. VegOut provides regionallevel vegetation monitoring capabilities with local-scale information (e.g., county to sub-county level) that can complement more traditional remote sensing-based approaches that monitor "current" vegetation conditions. In this paper, the VegOut approach is discussed and a case study over the central United States for selected periods of the 2008 growing season is presented to demonstrate the potential of this new tool for assessing and predicting vegetation conditions.
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The role of Mixer in patterning the early Xenopus embryo.
Kofron, Matt; Wylie, Chris; Heasman, Janet
2004-05-01
The transcription factor VegT, is required in early Xenopus embryos for the formation of both the mesoderm and endoderm germ layers. Inherited as a maternal mRNA localized only in vegetal cells, VegT activates the transcription of a large number of transcription factors, as well as signaling ligands that induce cells in the vegetal mass to form endoderm, and the marginal zone to form mesoderm. It is important now to understand the extent to which transcription factors downstream of VegT play individual, or overlapping, roles in the specification and patterning of the endoderm and mesoderm. In addition, it is important to understand the mechanism that specifies the boundary between endoderm and mesoderm. One of the downstream targets of VegT, the homeodomain protein Mixer, is expressed at high levels at the mesoderm/endoderm boundary at the late blastula stage. We therefore examined its functions by blocking its translation using morpholino oligos. In Mixer-depleted embryos, the expression of many signaling ligands and transcription factors was affected. In particular, we found that the expression of several genes, including several normally expressed in mesoderm, was upregulated. Functional assays of Mixer-depleted vegetal cells showed that they have increased mesoderm-inducing activity. This demonstrates that Mixer plays an essential role in controlling the amount of mesoderm induction by the vegetal cells.
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Thullen, J.S.; Sartoris, J.J.; Nelson, S.M.
2002-01-01
The impact of three vegetation management strategies on wetland treatment function and mosquito production was assessed in eight free water surface wetland test cells in southern California during 1998–1999. The effectiveness of the strategies to limit bulrush Schoenoplectus californicus culm density within the cells was also investigated. Removing accumulated emergent biomass and physically limiting the area in which vegetation could reestablish, significantly improved the ammonia–nitrogen removal efficiency of the wetland cells, which received an ammonia-dominated municipal wastewater effluent (average loading rate=9.88 kg/ha per day NH4-N). We determined that interspersing open water with emergent vegetation is critical for maintaining the wetland's treatment capability, particularly for systems high in NH4-N. Burning aboveground plant parts and thinning rhizomes only temporarily curtailed vegetation proliferation in shallow zones, whereas creating hummocks surrounded by deeper water successfully restricted the emergent vegetation to the shallower hummock areas. Since the hummock configuration kept open water areas interspersed throughout the stands of emergent vegetation, the strategy was also effective in reducing mosquito production. Decreasing vegetation biomass reduced mosquito refuge areas while increasing mosquito predator habitat. Therefore, the combined goals of water quality improvement and mosquito management were achieved by managing the spatial pattern of emergent vegetation to mimic an early successional growth stage, i.e. actively growing plants interspersed with open water.
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Thullen, J.S.; Sartoris, J.J.; Walton, W.E.
2002-01-01
The impact of three vegetation management strategies on wetland treatment function and mosquito production was assessed in eight free water surface wetland test cells in southern California during 1998-1999. The effectiveness of the strategies to limit bulrush Schoenoplectus californicus culm density within the cells was also investigated. Removing accumulated emergent biomass and physically limiting the area in which vegetation could reestablish, significantly improved the ammonia - nitrogen removal efficiency of the wetland cells, which received an ammonia-dominated municipal wastewater effluent (average loading rate = 9.88 kg/ha per day NH4-N). We determined that interspersing open water with emergent vegetation is critical for maintaining the wetland's treatment capability, particularly for systems high in NH4-N. Burning aboveground plant parts and thinning rhizomes only temporarily curtailed vegetation proliferation in shallow zones, whereas creating hummocks surrounded by deeper water successfully restricted the emergent vegetation to the shallower hummock areas. Since the hummock configuration kept open water areas interspersed throughout the stands of emergent vegetation, the strategy was also effective in reducing mosquito production. Decreasing vegetation biomass reduced mosquito refuge areas while increasing mosquito predator habitat. Therefore, the combined goals of water quality improvement and mosquito management were achieved by managing the spatial pattern of emergent vegetation to mimic an early successional growth stage, i.e. actively growing plants interspersed with open water. ?? 2002 Elsevier Science B.V. All rights reserved.
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Topology of the germ plasm and development of primordial germ cells in inverted amphibian eggs
NASA Technical Reports Server (NTRS)
Wakahara, M.; Neff, A. W.; Malacinski, G. M.
1984-01-01
Inverted Xenopus eggs have reduced numbers of primordial germ cells (PGCs). The extent of the reduction varies from spawning to spawning. Histologic examination revealed that PGC counts were lowest in inverted eggs which displayed the greatest amount of shift in the vegetal mass of large yolk platelets, although the germ plasm itself always remained localized in the egg's original vegetal hemisphere. Even at blastulation the germ plasm continued to be localized in the egg's original vegetal hemisphere. In many cases, however, it was confined to the periphery of the embryo, which probably accounts for the reduced PGC number in some tadpoles. In other cases it may have been dispersed and therefore not detectable in histologic analyses. Although the altered site of involution in inverted embryos did not influence PGC development, subsequent cell movement patterns apparently did. Those embryos which displayed the largest degree of pattern reversal at the tail-bud stage also exhibited the most extreme reduction in PGC numbers. A brief cold shock (4 degrees C, 10 min) prior to first cleavage leads to a further reduction in PGC numbers in inverted embryos, probably as a result of the displacement of the germ plasm away from its original vegetal pole location.
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Influence of topographic heterogeneity on the abandance of larch forest in eastern Siberia
NASA Astrophysics Data System (ADS)
Sato, H.; Kobayashi, H.
2016-12-01
In eastern Siberia, larches (Larix spp.) often exist in pure stands, constructing the world's largest coniferous forest, of which changes can significantly affect the earth's albedo and the global carbon balance. We have conducted simulation studies for this vegetation, aiming to forecast its structures and functions under changing climate (1, 2). In previous studies of simulating vegetation at large geographical scales, the examining area is divided into coarse grid cells such as 0.5 * 0.5 degree resolution, and topographical heterogeneities within each grid cell are just ignored. However, in Siberian larch area, which is located on the environmental edge of existence of forest ecosystem, abundance of larch trees largely depends on topographic condition at the scale of tens to hundreds meters. We, therefore, analyzed patterns of within-grid-scale heterogeneity of larch LAI as a function of topographic condition, and examined its underlying reason. For this analysis, larch LAI was estimated for each 1/112 degree from the SPOT-VEGETATION data, and topographic properties such as angularity and aspect direction were estimated form the ASTER-GDEM data. Through this analysis, we found that, for example, sign of correlation between angularity and larch LAI depends on hydrological condition on the grid cell. We then refined the hydrological sub-model of our vegetation model SEIB-DGVM, and validated whether the modified model can reconstruct these patterns, and examined its impact on the estimation of biomass and vegetation productivity of entire larch region. -- References --1. Sato, H., et al. (2010). "Simulation study of the vegetation structure and function in eastern Siberian larch forests using the individual-based vegetation model SEIB-DGVM." Forest Ecology and Management 259(3): 301-311.2. Sato, H., et al. (2016). "Endurance of larch forest ecosystems in eastern Siberia under warming trends." Ecology and Evolution
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Cha, Sang-Wook; McAdams, Meredith; Kormish, Jay; Wylie, Christopher; Kofron, Matthew
2012-01-01
Foxi1e is a zygotic transcription factor that is essential for the expression of early ectodermal genes. It is expressed in a highly specific pattern, only in the deep cell layers of the animal hemisphere, and in a mosaic pattern in which expressing cells are interspersed with non-expressing cells. Previous work has shown that several signals in the blastula control this expression pattern, including nodals, the TGFβ family member Vg1, and Notch. However, these are all inhibitory, which raises the question of what activates Foxi1e. In this work, we show that a related Forkhead family protein, Foxi2, is a maternal activator of Foxi1e. Foxi2 mRNA is maternally encoded, and highly enriched in animal hemisphere cells of the blastula. ChIP assays show that it acts directly on upstream regulatory elements of Foxi1e. Its effect is specific, since animal cells depleted of Foxi2 are able to respond normally to mesoderm inducing signals from vegetal cells. Foxi2 thus acts as a link between the oocyte and the early pathway to ectoderm, in a similar fashion to the vegetally localized VegT acts to initiate endoderm and mesoderm formation. PMID:22848601
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Luna, Gian Marco; Corinaldesi, Cinzia; Rastelli, Eugenio; Danovaro, Roberto
2013-10-01
We investigated the patterns and drivers of bacterial α- and β-diversity, along with viral and prokaryotic abundance and the carbon production rates, in marine surface and subsurface sediments (down to 1 m depth) in two habitats: vegetated sediments (seagrass meadow) and non-vegetated sediments. Prokaryotic abundance and production decreased with depth in the sediment, but cell-specific production rates and the virus-to-prokaryote ratio increased, highlighting unexpectedly high activity in the subsurface. The highest diversity was observed in vegetated sediments. Bacterial β-diversity between sediment horizons was high, and only a minor number of taxa was shared between surface and subsurface layers. Viruses significantly contributed to explain α- and β-diversity patterns. Despite potential limitations due to the only use of fingerprinting techniques, this study indicates that the coastal subsurface host highly active and diversified bacterial assemblages, that subsurface cells are more active than expected and that viruses promote β-diversity and stimulate bacterial metabolism in subsurface layers. The limited number of taxa shared between habitats, and between surface and subsurface sediment horizons, suggests that future investigations of the shallow subsurface will provide insights into the census of bacterial diversity, and the comprehension of the patterns and drivers of prokaryotic diversity in marine ecosystems. © 2013 John Wiley & Sons Ltd and Society for Applied Microbiology.
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Liu, Xudong; Wang, Xiaorong; Lin, Sihao; Lao, Xiangqian; Zhao, Jin; Song, Qingkun; Su, Xuefen; Tak-Sun Yu, Ignatius
2017-02-01
Few studies were available in exploring the roles of dietary patterns in the development of esophageal cancer, especially in China. This study aimed to investigate the roles of dietary patterns in the risk of esophageal squamous cell carcinoma (ESCC) in a Chinese rural population. A population-based cases-control study was designed and conducted in Yanting County, Sichuan Province of China during two years (between June 2011 and May 2013). A total of 942 pairs of ESCC cases and controls were recruited. A food frequency questionnaire was adopted to collect information of dietary consumption. Dietary patterns were extracted by using principle component and factor analysis based on 24 dietary groups. Odds ratios (ORs) with 95% confidence intervals (95% CI) were calculated by using logistic regression model, with adjustment for possible confounding variables. Four major dietary patterns were identified, which were labeled as "prudent", "vegetable and fruits", "processed food" and "alcohol drinking". In comparison of the highest with the lowest quartiles of pattern scores, the processed food pattern (OR: 2.84, 95% CI: 2.13-3.80) and alcohol drinking pattern (OR: 2.69, 95% CI: 1.95-3.71) were significantly associated with an increased risk of ESCC, while the vegetable and fruit pattern (OR: 0.70, 95% CI: 0.53-0.92) was associated with reduced risk by 30%. The prudent pattern was associated with a reduced risk by 33% (OR: 0.67, 95% CI: 0.50-0.88) in a multivariate logistic regression model, but no statistical significance was reached in a composite model. The results suggest an important role of dietary patterns in ESCC. Diets rich in vegetables and fruits may decrease the risk of ESCC, whereas diets rich in processed food and drinking alcohol may increase the risk. Copyright © 2015 Elsevier Ltd and European Society for Clinical Nutrition and Metabolism. All rights reserved.
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A morphometric analysis of vegetation patterns in dryland ecosystems
Dekker, Stefan C.; Li, Mao; Mio, Washington; Punyasena, Surangi W.; Lenton, Timothy M.
2017-01-01
Vegetation in dryland ecosystems often forms remarkable spatial patterns. These range from regular bands of vegetation alternating with bare ground, to vegetated spots and labyrinths, to regular gaps of bare ground within an otherwise continuous expanse of vegetation. It has been suggested that spotted vegetation patterns could indicate that collapse into a bare ground state is imminent, and the morphology of spatial vegetation patterns, therefore, represents a potentially valuable source of information on the proximity of regime shifts in dryland ecosystems. In this paper, we have developed quantitative methods to characterize the morphology of spatial patterns in dryland vegetation. Our approach is based on algorithmic techniques that have been used to classify pollen grains on the basis of textural patterning, and involves constructing feature vectors to quantify the shapes formed by vegetation patterns. We have analysed images of patterned vegetation produced by a computational model and a small set of satellite images from South Kordofan (South Sudan), which illustrates that our methods are applicable to both simulated and real-world data. Our approach provides a means of quantifying patterns that are frequently described using qualitative terminology, and could be used to classify vegetation patterns in large-scale satellite surveys of dryland ecosystems. PMID:28386414
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A morphometric analysis of vegetation patterns in dryland ecosystems.
Mander, Luke; Dekker, Stefan C; Li, Mao; Mio, Washington; Punyasena, Surangi W; Lenton, Timothy M
2017-02-01
Vegetation in dryland ecosystems often forms remarkable spatial patterns. These range from regular bands of vegetation alternating with bare ground, to vegetated spots and labyrinths, to regular gaps of bare ground within an otherwise continuous expanse of vegetation. It has been suggested that spotted vegetation patterns could indicate that collapse into a bare ground state is imminent, and the morphology of spatial vegetation patterns, therefore, represents a potentially valuable source of information on the proximity of regime shifts in dryland ecosystems. In this paper, we have developed quantitative methods to characterize the morphology of spatial patterns in dryland vegetation. Our approach is based on algorithmic techniques that have been used to classify pollen grains on the basis of textural patterning, and involves constructing feature vectors to quantify the shapes formed by vegetation patterns. We have analysed images of patterned vegetation produced by a computational model and a small set of satellite images from South Kordofan (South Sudan), which illustrates that our methods are applicable to both simulated and real-world data. Our approach provides a means of quantifying patterns that are frequently described using qualitative terminology, and could be used to classify vegetation patterns in large-scale satellite surveys of dryland ecosystems.
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A morphometric analysis of vegetation patterns in dryland ecosystems
NASA Astrophysics Data System (ADS)
Mander, Luke; Dekker, Stefan C.; Li, Mao; Mio, Washington; Punyasena, Surangi W.; Lenton, Timothy M.
2017-02-01
Vegetation in dryland ecosystems often forms remarkable spatial patterns. These range from regular bands of vegetation alternating with bare ground, to vegetated spots and labyrinths, to regular gaps of bare ground within an otherwise continuous expanse of vegetation. It has been suggested that spotted vegetation patterns could indicate that collapse into a bare ground state is imminent, and the morphology of spatial vegetation patterns, therefore, represents a potentially valuable source of information on the proximity of regime shifts in dryland ecosystems. In this paper, we have developed quantitative methods to characterize the morphology of spatial patterns in dryland vegetation. Our approach is based on algorithmic techniques that have been used to classify pollen grains on the basis of textural patterning, and involves constructing feature vectors to quantify the shapes formed by vegetation patterns. We have analysed images of patterned vegetation produced by a computational model and a small set of satellite images from South Kordofan (South Sudan), which illustrates that our methods are applicable to both simulated and real-world data. Our approach provides a means of quantifying patterns that are frequently described using qualitative terminology, and could be used to classify vegetation patterns in large-scale satellite surveys of dryland ecosystems.
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Wudick, Michael M; Luu, Doan-Trung; Tournaire-Roux, Colette; Sakamoto, Wataru; Maurel, Christophe
2014-04-01
The water and nutrient status of pollen is crucial to plant reproduction. Pollen grains of Arabidopsis (Arabidopsis thaliana) contain a large vegetative cell and two smaller sperm cells. Pollen grains express AtTIP1;3 and AtTIP5;1, two members of the Tonoplast Intrinsic Protein subfamily of aquaporins. To address the spatial and temporal expression pattern of the two homologs, C-terminal fusions of AtTIP1;3 and AtTIP5;1 with green fluorescent protein and mCherry, respectively, were expressed in transgenic Arabidopsis under the control of their native promoter. Confocal laser scanning microscopy revealed that AtTIP1;3 and AtTIP5;1 are specific for the vacuoles of the vegetative and sperm cells, respectively. The tonoplast localization of AtTIP5;1 was established by reference to fluorescent protein markers for the mitochondria and vacuoles of sperm and vegetative cells and is at variance with the claim that AtTIP5;1 is localized in vegetative cell mitochondria. AtTIP1;3-green fluorescent protein and AtTIP5;1-mCherry showed concomitant expression, from first pollen mitosis up to pollen tube penetration in the ovule, thereby revealing the dynamics of vacuole morphology in maturating and germinating pollen. Transfer DNA insertion mutants for either AtTIP1;3 or AtTIP5;1 showed no apparent growth phenotype and had no significant defect in male transmission of the mutated alleles. By contrast, a double knockout displayed an abnormal rate of barren siliques, this phenotype being more pronounced under limited water or nutrient supply. The overall data indicate that vacuoles of vegetative and sperm cells functionally interact and contribute to male fertility in adverse environmental conditions.
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Nuclear dynamics during germination, conidiation, and hyphal fusion of Fusarium oxysporum.
Ruiz-Roldán, M Carmen; Köhli, Michael; Roncero, M Isabel G; Philippsen, Peter; Di Pietro, Antonio; Espeso, Eduardo A
2010-08-01
In many fungal pathogens, infection is initiated by conidial germination. Subsequent stages involve germ tube elongation, conidiation, and vegetative hyphal fusion (anastomosis). Here, we used live-cell fluorescence to study the dynamics of green fluorescent protein (GFP)- and cherry fluorescent protein (ChFP)-labeled nuclei in the plant pathogen Fusarium oxysporum. Hyphae of F. oxysporum have uninucleated cells and exhibit an acropetal nuclear pedigree, where only the nucleus in the apical compartment is mitotically active. In contrast, conidiation follows a basopetal pattern, whereby mononucleated microconidia are generated by repeated mitotic cycles of the subapical nucleus in the phialide, followed by septation and cell abscission. Vegetative hyphal fusion is preceded by directed growth of the fusion hypha toward the receptor hypha and followed by a series of postfusion nuclear events, including mitosis of the apical nucleus of the fusion hypha, migration of a daughter nucleus into the receptor hypha, and degradation of the resident nucleus. These previously unreported patterns of nuclear dynamics in F. oxysporum could be intimately related to its pathogenic lifestyle.
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NASA Astrophysics Data System (ADS)
Sato, H.; Kobayashi, H.
2017-12-01
In eastern Siberia, larches (Larix spp.) often exist in pure stands, constructing the world's largest coniferous forest, of which changes can significantly affect the earth's albedo and the global carbon balance. Our previous studies tried to reconstruct this vegetation, aiming to forecast its structures and functions under changing climate (1, 2). In previous studies of simulating vegetation at large geographical scales, the examining area is divided into coarse grid cells such as 0.5 × 0.5 degree resolution, and topographical heterogeneities within each grid cell are just ignored. However, in Siberian larch area, which is located on the environmental edge of existence of forest ecosystem, abundance of larch trees largely depends on topographic condition at the scale of tens to hundreds meters. In our preliminary analysis, we found a quantitative pattern that topographic properties controls the abundance of larch forest via both drought and flooding stresses in eastern Siberia. We, therefore, refined the hydrological sub-model of our dynamic vegetation model SEIB-DGVM, and validated whether the modified model can reconstruct the pattern, examined its impact on the estimation of biomass and vegetation productivity under the current and forecasted future climatic conditions. -- References --1. Sato, H., et al. (2010). "Simulation study of the vegetation structure and function in eastern Siberian larch forests using the individual-based vegetation model SEIB-DGVM." Forest Ecology and Management 259(3): 301-311. 2. Sato, H., et al. (2016). "Endurance of larch forest ecosystems in eastern Siberia under warming trends." Ecology and Evolution
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Huang, Tousheng; Zhang, Huayong; Dai, Liming; Cong, Xuebing; Ma, Shengnan
2018-03-01
This research investigates the formation of banded vegetation patterns on hillslopes affected by interactions between sediment deposition and vegetation growth. The following two perspectives in the formation of these patterns are taken into consideration: (a) increased sediment deposition from plant interception, and (b) reduced plant biomass caused by sediment accumulation. A spatial model is proposed to describe how the interactions between sediment deposition and vegetation growth promote self-organization of banded vegetation patterns. Based on theoretical and numerical analyses of the proposed spatial model, vegetation bands can result from a Turing instability mechanism. The banded vegetation patterns obtained in this research resemble patterns reported in the literature. Moreover, measured by sediment dynamics, the variation of hillslope landform can be described. The model predicts how treads on hillslopes evolve with the banded patterns. Thus, we provide a quantitative interpretation for coevolution of vegetation patterns and landforms under effects of sediment redistribution. Copyright © 2018. Published by Elsevier Masson SAS.
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Groszmann, Michael; Gonzalez-Bayon, Rebeca; Greaves, Ian K; Wang, Li; Huen, Amanda K; Peacock, W James; Dennis, Elizabeth S
2014-09-01
Heterosis is important for agriculture; however, little is known about the mechanisms driving hybrid vigor. Ultimately, heterosis depends on the interactions of specific alleles and epialleles provided by the parents, which is why hybrids can exhibit different levels of heterosis, even within the same species. We characterize the development of several intraspecific Arabidopsis (Arabidopsis thaliana) F1 hybrids that show different levels of heterosis at maturity. We identify several phases of heterosis beginning during embryogenesis and culminating in a final phase of vegetative maturity and seed production. During each phase, the hybrids show different levels and patterns of growth, despite the close relatedness of the parents. For instance, during the vegetative phases, the hybrids develop larger leaves than the parents to varied extents, and they do so by exploiting increases in cell size and cell numbers in different ratios. Consistent with this finding, we observed changes in the expression of genes known to regulate leaf size in developing rosettes of the hybrids, with the patterns of altered expression differing between combinations. The data show that heterosis is dependent on changes in development throughout the growth cycle of the hybrid, with the traits of mature vegetative biomass and reproductive yield as cumulative outcomes of heterosis at different levels, tissues, and times of development. © 2014 American Society of Plant Biologists. All Rights Reserved.
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Associations Between Dietary Patterns and Head and Neck Cancer
Bradshaw, Patrick T.; Siega-Riz, Anna Maria; Campbell, Marci; Weissler, Mark C.; Funkhouser, William K.; Olshan, Andrew F.
2012-01-01
Few studies have examined the associations between dietary patterns and head and neck squamous cell carcinoma (SCC) or whether they differ by race. This was evaluated using data from a population-based case-control study (2002–2006) including 1,176 cases of head and neck SCC and 1,317 age-, race-, and gender-matched controls from central and eastern North Carolina whose diets had been assessed by food frequency questionnaire. Factor analysis identified 2 patterns of intake: 1) high consumption of fruits, vegetables, and lean protein and 2) high consumption of fried foods, high-fat and processed meats, and sweets. Associations were estimated using logistic regression, adjusting for matching factors and confounders. Heterogeneity by tumor site (oral/pharyngeal vs. laryngeal) and effect-measure modification were also evaluated. Reduced odds of head and neck SCC were found for the fruit, vegetable, and lean protein pattern (for highest quartile vs. lowest, odds ratio = 0.53, 95% confidence interval: 0.39, 0.71). The fried foods, high-fat and processed meats, and sweets pattern was positively associated only with laryngeal cancer (odds ratio = 2.12, 95% confidence interval: 1.21, 3.72). These findings underline the importance of a dietary pattern rich in fruits and vegetables and low in high-fat and processed meats and sweets for prevention of head and neck cancer. PMID:22575416
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Bedford, D.R.; Small, E.E.
2008-01-01
Spatial patterns of soil properties are linked to patchy vegetation in arid and semi-arid landscapes. The patterns of soil properties are generally assumed to be linked to the ecohydrological functioning of patchy dryland vegetation ecosystems. We studied the effects of vegetation canopy, its spatial pattern, and landforms on soil properties affecting overland flow and infiltration in shrublands at the Sevilleta National Wildlife Refuge/LTER in central New Mexico, USA. We studied the patterns of microtopography and saturated conductivity (Ksat), and generally found it to be affected by vegetation canopy and pattern, as well as landform type. On gently sloping alluvial fans, both microtopography and Ksat are high under vegetation canopy and decay with distance from plant center. On steeper hillslope landforms, only microtopography was significantly higher under vegetation canopy, while there was no significant difference in Ksat between vegetation and interspaces. Using geostatistics, we found that the spatial pattern of soil properties was determined by the spatial pattern of vegetation. Most importantly, the effects of vegetation were present in the unvegetated interspaces 2-4 times the extent of vegetation canopy, on the order of 2-3??m. Our results have implications for the understanding the ecohydrologic function of semi-arid ecosystems as well as the parameterization of hydrologic models. ?? 2007 Elsevier B.V. All rights reserved.
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Robust stochastic Turing patterns in the development of a one-dimensional cyanobacterial organism.
Di Patti, Francesca; Lavacchi, Laura; Arbel-Goren, Rinat; Schein-Lubomirsky, Leora; Fanelli, Duccio; Stavans, Joel
2018-05-01
Under nitrogen deprivation, the one-dimensional cyanobacterial organism Anabaena sp. PCC 7120 develops patterns of single, nitrogen-fixing cells separated by nearly regular intervals of photosynthetic vegetative cells. We study a minimal, stochastic model of developmental patterns in Anabaena that includes a nondiffusing activator, two diffusing inhibitor morphogens, demographic fluctuations in the number of morphogen molecules, and filament growth. By tracking developing filaments, we provide experimental evidence for different spatiotemporal roles of the two inhibitors during pattern maintenance and for small molecular copy numbers, justifying a stochastic approach. In the deterministic limit, the model yields Turing patterns within a region of parameter space that shrinks markedly as the inhibitor diffusivities become equal. Transient, noise-driven, stochastic Turing patterns are produced outside this region, which can then be fixed by downstream genetic commitment pathways, dramatically enhancing the robustness of pattern formation, also in the biologically relevant situation in which the inhibitors' diffusivities may be comparable.
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Vegetation Patterns and Degradation Thresholds in the Mulga Landscapes of Australia
NASA Astrophysics Data System (ADS)
Azadi, Samira; Saco, Patricia; Moreno-de las Heras, Mariano; Willgoose, Garry
2017-04-01
Drylands are often characterised by a spatially heterogeneous vegetation cover forming mosaics of patches dense vegetation within bare soil. This 'patterned' or 'patchy' vegetation cover is sensitive to human pressures. Previous work suggests that within these landscapes there is a critical vegetation cover threshold below which the landscape functionality is lost. This threshold behaviour is tightly linked to the overland flow redistribution and an increase in hydrologic connectivity that induces loss of resources (i.e., leakiness). In fact, disturbances (such as wildfire, overgrazing or harvesting activities) can disrupt the spatial structure of vegetation, increase landscape hydrologic connectivity, trigger erosion and produce a substantial loss of water. All these effects affect ecosystem functionality. Here we present the results of exploring the impact of degradation processes induced by vegetation disturbances (mainly grazing) on ecosystem functionality and connectivity in semiarid landscapes with various types of vegetation patterns. The sites are carefully selected in Mulga landscapes bioregion (New South Wales, Queensland) and in sites of Northern Territory in Australia, which display similar vegetation characteristics but with different vegetation patterns and good quality rainfall information. The analysis of vegetation patterns is derived from high resolution remote sensing images (IKONOS, QuickBird, Pleiades). Using MODIS NDVI and local precipitation data, we compute rainfall use efficiency and precipitation marginal response in order to assess the ecosystem functionality. We use vegetation binary maps and digital elevation models to estimate mean Flowlength as an indicator of structural hydrologic connectivity. We compare the trends for several sites with varying vegetation patterns (i.e., banded versus spotted patterns). Our results show that disturbances increase hydrologic connectivity and suggest threshold behaviour that affects landscape functionality. Though this threshold behaviour is found in all sites, the plots in higher rainfall landscapes with banded vegetation patterns show evidence of higher resilience. We will also present some preliminary modelling results that complement this analysis and capture the coevolution of vegetation and landforms (erosion), leading to this type of threshold behaviour.
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Dynamic expression of a Hydra FGF at boundaries and termini.
Lange, Ellen; Bertrand, Stephanie; Holz, Oliver; Rebscher, Nicole; Hassel, Monika
2014-12-01
Guidance of cells and tissue sheets is an essential function in developing and differentiating animal tissues. In Hydra, where cells and tissue move dynamically due to constant cell proliferation towards the termini or into lateral, vegetative buds, factors essential for guidance are still unknown. Good candidates to take over this function are fibroblast growth factors (FGFs). We present the phylogeny of several Hydra FGFs and analysis of their expression patterns. One of the FGFs is expressed in all terminal regions targeted by tissue movement and at boundaries crossed by moving tissue and cells with an expression pattern slightly differing in two Hydra strains. A model addressing an involvement of this FGF in cell movement and morphogenesis is proposed: Hydra FGFf-expressing cells might serve as sources to attract tissue and cells towards the termini of the body column and across morphological boundaries. Moreover, a function in morphogenesis and/or differentiation of cells and tissue is suggested.
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Rotating spiral waves in fertilized ascidian eggs.
Ballarò, Benedetto; Reas, Pier Giorgio
2002-01-01
Excitable systems modelled by reaction-diffusion equation may be expected to produce quite complex spatial patterns. Winfree [1974] demonstrated experimentally, in the Belousov-Zhabotinskii reaction, the existence of particular waves called rotating spiral waves. Later Keener and Tyson [1986] presented a thorough analysis of these waves in excitable systems. Spiral waves can also be observed in brain tissue (Shibata and Bures [1974]), while it seems that the precursor to cardiac fibrillation is the appearance of rotating waves of electrical impulses (Winfree [1983]). In this work we suppose the appearance of Ca++ spiral waves in the vegetal pole of ascidian egg cells after the first ooplasmic segregation. Previously we observed that (Ballarò and Reas [2000a]), when the myoplasm is completely localized in the vegetal region (excitable stage) and the ascidian egg cell is perturbed by an increase of Ca++ concentration in the culture medium, the cell reacts by showing persistent mechanical waves of contraction which exist as long as the cell is perturbed. Experimentally we observed the production of a polar lobe located in the vegetal region and the change of the inclination of mitotic furrow, after the appearance of a myoplasmic spiral wave in the vegetal pole. So we suppose that the myoplasmic spiral wave is due to a Ca++ spiral wave, and the myoplasmic spiral wave then causes the changes in the shape of the cell (polar lobe, inclination of mitotic furrow, etc.). Moreover we give a simple geometrical description of a spiral wave.
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Expansion of TALE homeobox genes and the evolution of spiralian development.
Morino, Yoshiaki; Hashimoto, Naoki; Wada, Hiroshi
2017-12-01
Spiralians, including molluscs, annelids and platyhelminths, share a unique development process that includes the typical geometry of early cleavage and early segregation of cell fate in blastomeres along the animal-vegetal axis. However, the molecular mechanisms underlying this early cell fate segregation are largely unknown. Here, we report spiralian-specific expansion of the three-amino-acid loop extension (TALE) class of homeobox genes. During early development, some of these TALE genes are expressed in staggered domains along the animal-vegetal axis in the limpet Nipponacmea fuscoviridis and the polychaete Spirobranchus kraussii. Inhibition or overexpression of these genes alters the developmental fate of blastomeres, as predicted by the gene expression patterns. These results suggest that the expansion of novel TALE genes plays a critical role in the establishment of a novel cell fate segregation mechanism in spiralians.
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Phytoplasmal infection derails genetically preprogrammed meristem fate and alters plant architecture
USDA-ARS?s Scientific Manuscript database
In the life cycle of higher plants, it is the fate of meristem cells that determines the pattern of growth and development, and therefore plant morphotype and fertility. Floral transition, the turning point from vegetative growth to reproductive development, is achieved via genetically-programmed s...
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Deep cytoplasmic rearrangements in ventralized Xenopus embryos
NASA Technical Reports Server (NTRS)
Brown, E. E.; Denegre, J. M.; Danilchik, M. V.
1993-01-01
Following fertilization in Xenopus, dramatic rearrangements of the egg cytoplasm relocalize maternally synthesized egg components. During the first cell cycle the vegetal yolk mass rotates relative to the egg surface, toward the sperm entry point (SEP) (J. P. Vincent, G. F. Oster, and J. C. Gerhart, 1986, Dev. Biol. 113, 484-500), while concomitant deep cytoplasmic rearrangements occur in the animal hemisphere (M. V. Danilchik and J. M. Denegre, 1991, Development 111, 845-856). In this paper we examine the role of vegetal yolk mass rotation in producing the animal cytoplasmic rearrangements. We inhibited rotation by uv-irradiating embryos during the first cell cycle, a treatment that yields an extremely ventralized phenotype. Both uv-irradiated embryos and unirradiated control embryos show cytoplasmic rearrangements in the animal hemisphere during the first cell cycle. Cytoplasmic rearrangements on the SEP side of the embryo associated with the path of the sperm pronucleus, plus a swirl on the anti-SEP (dorsal) side, are seen, whether or not yolk mass rotation has occurred. This result suggests a role for the expanding sperm aster in directing animal hemisphere cytoplasmic movements. In unirradiated control embryos the anti-SEP (dorsal) swirl is larger than that in uv-irradiated embryos and often extends into the vegetal hemisphere, consistent with the animal cytoplasm having been pulled dorsally and vegetally by the sliding vegetal yolk mass. Thus the yolk mass rotation may normally enhance the dorsalward cytoplasmic movement, begun by the sperm aster, enough to induce normal axis formation. We extended our observations of unirradiated control and uv-irradiated embryos through early cleavages. The vegetal extent of the anti-SEP (dorsal) swirl pattern seen in control embryos persists through the early cleavage period, such that labeled animal cytoplasm extends deep into dorsal third-tier blastomeres at the 32-cell stage. Significantly, in uv-irradiated embryos, which have not undergone vegetal rotation, most of this labeled material remains more equatorial.
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Global vegetation productivity response to climatic oscillations during the satellite era.
Gonsamo, Alemu; Chen, Jing M; Lombardozzi, Danica
2016-10-01
Climate control on global vegetation productivity patterns has intensified in response to recent global warming. Yet, the contributions of the leading internal climatic variations to global vegetation productivity are poorly understood. Here, we use 30 years of global satellite observations to study climatic variations controls on continental and global vegetation productivity patterns. El Niño-Southern Oscillation (ENSO) phases (La Niña, neutral, and El Niño years) appear to be a weaker control on global-scale vegetation productivity than previously thought, although continental-scale responses are substantial. There is also clear evidence that other non-ENSO climatic variations have a strong control on spatial patterns of vegetation productivity mainly through their influence on temperature. Among the eight leading internal climatic variations, the East Atlantic/West Russia Pattern extensively controls the ensuing year vegetation productivity of the most productive tropical and temperate forest ecosystems of the Earth's vegetated surface through directionally consistent influence on vegetation greenness. The Community Climate System Model (CCSM4) simulations do not capture the observed patterns of vegetation productivity responses to internal climatic variations. Our analyses show the ubiquitous control of climatic variations on vegetation productivity and can further guide CCSM and other Earth system models developments to represent vegetation response patterns to unforced variability. Several winter time internal climatic variation indices show strong potentials on predicting growing season vegetation productivity two to six seasons ahead which enables national governments and farmers forecast crop yield to ensure supplies of affordable food, famine early warning, and plan management options to minimize yield losses ahead of time. © 2016 John Wiley & Sons Ltd.
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The multicellular nature of filamentous heterocyst-forming cyanobacteria.
Herrero, Antonia; Stavans, Joel; Flores, Enrique
2016-11-01
Cyanobacteria carry out oxygenic photosynthesis, play a key role in the cycling of carbon and nitrogen in the biosphere, and have had a large impact on the evolution of life and the Earth itself. Many cyanobacterial strains exhibit a multicellular lifestyle, growing as filaments that can be hundreds of cells long and endowed with intercellular communication. Furthermore, under depletion of combined nitrogen, filament growth requires the activity of two interdependent cell types: vegetative cells that fix CO2 and heterocysts that fix N2. Intercellular molecular transfer is essential for signaling involved in the regulation of heterocyst differentiation and for reciprocal nutrition of heterocysts and vegetative cells. Here we review various aspects of multicellularity in cyanobacterial filaments and their differentiation, including filament architecture with emphasis on the structures used for intercellular communication; we survey theoretical models that have been put forward to understand heterocyst patterning and discuss the factors that need to be considered for these models to reflect the biological entity; and finally, since cell division in filamentous cyanobacteria has the peculiarity of producing linked instead of independent cells, we review distinct aspects of cell division in these organisms.
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J.F. Lehmkuhl; P.F. Hessburg; R.L. Everett; M.H. Huff; R.D. Ottmar
1994-01-01
We analyzed historical and current vegetation composition and structure in 49 sample watersheds, primarily on National Forests, within six river basins in eastern Oregon and Washington. Vegetation patterns were mapped from aerial photographs taken from 1932 to 1959, and from 1985 to 1992. We described vegetation attributes, landscape patterns, the range of historical...
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Silvera, Stephanie A. Navarro; Mayne, Susan T; Risch, Harvey A.; Gammon, Marilie D; Vaughan, Thomas; Chow, Wong-Ho; Dubin, Joel A; Dubrow, Robert; Schoenberg, Janet; Stanford, Janet L; West, A. Brian; Rotterdam, Heidrun; Blot, William J
2011-01-01
Purpose To perform pattern analyses of dietary and lifestyle factors in relation to risk of esophageal and gastric cancers. Methods We evaluated risk factors for esophageal adenocarcinoma (EA), esophageal squamous cell carcinoma (ESCC), gastric cardia adenocarcinoma (GCA), and other gastric cancers (OGA) using data from a population-based case-control study conducted in Connecticut, New Jersey, and western Washington state. Dietary/lifestyle patterns were created using principal component analysis (PCA). Impact of the resultant scores on cancer risk was estimated through logistic regression. Results PCA identified six patterns: meat/nitrite, fruit/vegetable, smoking/alcohol, legume/meat alternate, GERD/BMI, and fish/vitamin C. Risk of each cancer under study increased with rising meat/nitrite score. Risk of EA increased with increasing GERD/BMI score, and risk of ESCC rose with increasing smoking/alcohol score and decreasing GERD/BMI score. Fruit/vegetable scores were inversely associated with EA, ESCC, and GCA. Conclusions PCA may provide a useful approach for summarizing extensive dietary/lifestyle data into fewer interpretable combinations that discriminate between cancer cases and controls. The analyses suggest that meat/nitrite intake is associated with elevated risk of each cancer under study, while fruit/vegetable intake reduces risk of EA, ESCC, and GCA. GERD/obesity were confirmed as risk factors for EA and smoking/alcohol as risk factors for ESCC. PMID:21435900
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NASA Technical Reports Server (NTRS)
Goward, S. N.; Tucker, C. J.; Dye, D. G.
1985-01-01
Spectral vegetation index measurements derived from remotely sensed observations show great promise as a means to improve knowledge of land vegetation patterns. The daily, global observations acquired by the advanced very high resolution radiometer, a sensor on the current series of U.S. National Oceanic and Atmospheric Administration meteorological satellites, may be particularly well suited for global studies of vegetation. Preliminary results from analysis of North American observations, extending from April to November 1982, show that the vegetation index patterns observed correspond to the known seasonality of North American natural and cultivated vegetation. Integration of the observations over the growing season produced measurements that are related to net primary productivity patterns of the major North American natural vegetation formations. Regions of intense cultivation were observed as anomalous areas in the integrated growing season measurements. Significant information on seasonality, annual extent and interannual variability of vegetation photosynthetic activity at continental and global scales can be derived from these satellite observations.
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NASA Astrophysics Data System (ADS)
Larsen, L.; Christensen, A.; Harvey, J. W.; Ma, H.; Newman, S.; Saunders, C.; Twilley, R.
2017-12-01
Emergence of vegetation patterning in fluvial landscapes is a classic example of how autogenic processes can drive long term fluvial and geomorphic adjustments in aquatic ecosystems. Studies elucidating the physics of flow through vegetation patches have produced understanding of how patterning in topography and vegetation commonly emerges and what effect it has on long term geomorphic change. However, with regard to mechanisms underlying pattern existence and resilience, several knowledge gaps remain, including the role of landscape-scale flow-vegetation feedbacks, feedbacks that invoke additional biogeochemical or biological agents, and determination of the relative importance of autogenic processes relative to external drivers. Here we provide a synthesis of the processes over a range of scales known to drive vegetation patterning and sedimentation in low gradient fluvial landscapes, emphasizing recent field and modeling studies in the Everglades, FL and Wax Lake Delta, LA that address these gaps. In the Everglades, while flow routing and sediment redistribution at the patch scale is known to be a primary driver of vegetation pattern emergence, landscape-scale routing of flow, as driven by the landscape's connectivity, can set up positive feedbacks that influence the rate of pattern degradation. Recent flow release experiments reveal that an additional feedback, involving phosphorus concentrations, flow, and floating vegetation communities that are abundant under low phosphorus, low flow conditions further stabilizes the alternative landscape states established through local scale sediment redistribution. Biogeochemistry-vegetation-sediment feedbacks may also be important for geomorphic development of newly emerging landscapes such as the Wax Lake Delta. There, fine sediment deposition shapes hydrogeomorphic zones with vegetation patterns that stimulate the growth of biofilm, while biofilm characteristics override the physical characteristics of vegetation canopies in determining fine sediment deposition rates and influence nitrogen and carbon biogeochemistry. Emerging tools and data streams, such as information flow analysis of lidar-derived vegetation biovolume and topography, can help identify the relative roles of autogenic vs. external forcing in these landscapes.
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Kudoh, Tetsuhiro; Concha, Miguel L.; Houart, Corinne; Dawid, Igor B.; Wilson, Stephen W.
2009-01-01
Summary Studies in fish and amphibia have shown that graded Bmp signalling activity regulates dorsal-to-ventral (DV) patterning of the gastrula embryo. In the ectoderm, it is thought that high levels of Bmp activity promote epidermal development ventrally, whereas secreted Bmp antagonists emanating from the organiser induce neural tissue dorsally. However, in zebrafish embryos, the domain of cells destined to contribute to the spinal cord extends all the way to the ventral side of the gastrula, a long way from the organiser. We show that in vegetal (trunk and tail) regions of the zebrafish gastrula, neural specification is initiated at all DV positions of the ectoderm in a manner that is unaffected by levels of Bmp activity and independent of organiser-derived signals. Instead, we find that Fgf activity is required to induce vegetal prospective neural markers and can do so without suppressing Bmp activity. We further show that Bmp signalling does occur within the vegetal prospective neural domain and that Bmp activity promotes the adoption of caudal fate by this tissue. PMID:15262889
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Vegetation pattern formation in a fog-dependent ecosystem.
Borthagaray, Ana I; Fuentes, Miguel A; Marquet, Pablo A
2010-07-07
Vegetation pattern formation is a striking characteristic of several water-limited ecosystems around the world. Typically, they have been described on runoff-based ecosystems emphasizing local interactions between water, biomass interception, growth and dispersal. Here, we show that this situation is by no means general, as banded patterns in vegetation can emerge in areas without rainfall and in plants without functional root (the Bromeliad Tillandsia landbeckii) and where fog is the principal source of moisture. We show that a simple model based on the advection of fog-water by wind and its interception by the vegetation can reproduce banded patterns which agree with empirical patterns observed in the Coastal Atacama Desert. Our model predicts how the parameters may affect the conditions to form the banded pattern, showing a transition from a uniform vegetated state, at high water input or terrain slope to a desert state throughout intermediate banded states. Moreover, the model predicts that the pattern wavelength is a decreasing non-linear function of fog-water input and slope, and an increasing function of plant loss and fog-water flow speed. Finally, we show that the vegetation density is increased by the formation of the regular pattern compared to the density expected by the spatially homogeneous model emphasizing the importance of self-organization in arid ecosystems. (c) 2010 Elsevier Ltd. All rights reserved.
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Cell cycles and proliferation patterns in Haematococcus pluvialis
NASA Astrophysics Data System (ADS)
Zhang, Chunhui; Liu, Jianguo; Zhang, Litao
2017-09-01
Most studies on Haematococcus pluvialis have been focused on cell growth and astaxanthin accumulation; far less attention has been paid to cell cycles and proliferation patterns. The purpose of this study was to clarify cell cycles and proliferation patterns in H. pluvialis microscopically using a camera and video recorder system. The complicated life history of H. pluvialis can be divided into two stages: the motile stage and the non-motile stage. All the cells can be classified into forms as follows: motile cell, nonmotile cell, zoospore and aplanospore. The main cell proliferation, both in the motile phase and non-motile phase in H. pluvialis, is by asexual reproduction. Under normal growth conditions, a motile cell usually produces two, sometimes four, and exceptionally eight zoospores. Under unfavorable conditions, the motile cell loses its flagella and transforms into a non-motile cell, and the non-motile cell usually produces 2, 4 or 8 aplanospores, and occasionally 20-32 aplanospores, which further develop into non-motile cells. Under suitable conditions, the non-motile cell is also able to release zoospores. The larger non-motile cells produce more than 16 zoospores, and the smaller ones produce 4 or 8 zoospores. Vegetative reproduction is by direct cell division in the motile phase and by occasional cell budding in the non-motile phase. There is, as yet, no convincing direct evidence for sexual reproduction.
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Li, Ying-Han; Wang, Jun-Jian; Chen, Xue; Sun, Jian-Lin; Zeng, Hui
2011-02-01
Based on field survey and landscape pattern analysis, this paper studied the effects of green space vegetation canopy on the microclimate in three typical residential quarters in Shenzhen City. In each of the residential quarters, 22-26 points were chosen for meteorological observation; and around each of the observation points, a 20 m x 20 m quadrat was installed, with each quadrat divided into two different patches, one covered by vegetation canopy and the another no-covered. The patch density index (D(p)) and contagion index (CONTAG) in each quadrat were calculated to analyze the relationships between vegetation canopy pattern index and microclimate in each point. The results showed that the green space vegetation canopy pattern in Shenzhen had significant regulation effect on temperature and humidity. The cooling effect was mainly from the shading effect of vegetation, and also, correlated with vegetation quantity. The increase in the CONTAG of bare surface had obvious negative effects on the regulation effect of vegetation on microclimate. The regulation capability of green space vegetation on the temperature and humidity in residential quarters mainly came from tall arbor species.
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The Role of Different Plant Soil-Water Feedbacks in Models of Dryland Vegetation Patterns
NASA Astrophysics Data System (ADS)
Silber, M.; Bonetti, S.; Gandhi, P.; Gowda, K.; Iams, S.; Porporato, A. M.
2017-12-01
Understanding the processes underlying the formation of regular vegetation patterns in arid and semi-arid regions is important to assessing desertification risk under increasing anthropogenic pressure. Various modeling frameworks have been proposed, which are all capable of generating similar patterns through self-organizing mechanisms that stem from assumptions about plant feedbacks on surface/subsurface water transport. We critically discuss a hierarchy of hydrology-vegetation models for the coupled dynamics of surface water, soil moisture, and vegetation biomass on a hillslope. We identify distinguishing features and trends for the periodic traveling wave solutions when there is an imposed idealized topography and make some comparisons to satellite images of large-scale banded vegetation patterns in drylands of Africa, Australia and North America. This work highlights the potential for constraining models by considerations of where the patterns may lie on a landscape, such as whether on a ridge or in a valley.
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NASA Astrophysics Data System (ADS)
Arkebauer, T. J.; Walter-Shea, E. A.
2017-12-01
Vegetation indices, based on canopy spectral reflectance, are widely used to infer physical and biological characteristics of vegetation. Understanding the changes in remotely sensed signals as vegetation responds to its changing environment is essential for full assessment of canopy structure and function. Canopy-level reflectance has been measured at Nebraska AmeriFlux sites US-Ne1, US-Ne2 and US-Ne3 for most years since flux measurements were initiated in 2001. Tower-mounted spectral sensors provided 10-minute averaged reflectance (in PAR and NIR spectral regions) every half hour through the growing season for maize and soybean. Canopy reflectance varied over diurnal and seasonal time periods which led to variations in vegetation indices. One source of variation is due to the interaction of incident solar radiant energy with canopy structure (e.g., reflectance varies with changes in solar zenith angle and direct beam fraction, vegetative fraction, and leaf angle distribution). Another source of variation results from changes in canopy function (e.g., fluctuations in gross primary production and invocation of photoprotective mechanisms with plant stress). We present here a series of diurnal "patterns" of vegetation indices (including Normalized Difference Vegetation Index and Chlorophyll Index) for maize and soybean under mostly clear sky conditions. We demonstrate that diurnal patterns change as the LAI of the canopy changes through the course of the growing season in a somewhat predictable pattern from plant emergence (low vegetative cover) through peak green LAI (full vegetation cover). However, there are changes in the diurnal pattern that we have yet to fully understand; this variation in pattern may indicate variation in canopy function. Initially, we have explored the pattern changes qualitatively and are currently developing more quantitative approaches.
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RNA-Seq of Arabidopsis Pollen Uncovers Novel Transcription and Alternative Splicing1[C][W][OA
Loraine, Ann E.; McCormick, Sheila; Estrada, April; Patel, Ketan; Qin, Peng
2013-01-01
Pollen grains of Arabidopsis (Arabidopsis thaliana) contain two haploid sperm cells enclosed in a haploid vegetative cell. Upon germination, the vegetative cell extrudes a pollen tube that carries the sperm to an ovule for fertilization. Knowing the identity, relative abundance, and splicing patterns of pollen transcripts will improve our understanding of pollen and allow investigation of tissue-specific splicing in plants. Most Arabidopsis pollen transcriptome studies have used the ATH1 microarray, which does not assay splice variants and lacks specific probe sets for many genes. To investigate the pollen transcriptome, we performed high-throughput sequencing (RNA-Seq) of Arabidopsis pollen and seedlings for comparison. Gene expression was more diverse in seedling, and genes involved in cell wall biogenesis were highly expressed in pollen. RNA-Seq detected at least 4,172 protein-coding genes expressed in pollen, including 289 assayed only by nonspecific probe sets. Additional exons and previously unannotated 5′ and 3′ untranslated regions for pollen-expressed genes were revealed. We detected regions in the genome not previously annotated as expressed; 14 were tested and 12 were confirmed by polymerase chain reaction. Gapped read alignments revealed 1,908 high-confidence new splicing events supported by 10 or more spliced read alignments. Alternative splicing patterns in pollen and seedling were highly correlated. For most alternatively spliced genes, the ratio of variants in pollen and seedling was similar, except for some encoding proteins involved in RNA splicing. This study highlights the robustness of splicing patterns in plants and the importance of ongoing annotation and visualization of RNA-Seq data using interactive tools such as Integrated Genome Browser. PMID:23590974
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The Origin And Migration Of Primordial Germ Cells In Sturgeons
Saito, Taiju; Pšenička, Martin; Goto, Rie; Adachi, Shinji; Inoue, Kunio; Arai, Katsutoshi; Yamaha, Etsuro
2014-01-01
Primordial germ cells (PGCs) arise elsewhere in the embryo and migrate into developing gonadal ridges during embryonic development. In several model animals, formation and migration patterns of PGCs have been studied, and it is known that these patterns vary. Sturgeons (genus Acipenser) have great potential for comparative and evolutionary studies of development. Sturgeons belong to the super class Actinoptergii, and their developmental pattern is similar to that of amphibians, although their phylogenetic position is an out-group to teleost fishes. Here, we reveal an injection technique for sturgeon eggs allowing visualization of germplasm and PGCs. Using this technique, we demonstrate that the PGCs are generated at the vegetal pole of the egg and they migrate on the yolky cell mass toward the gonadal ridge. We also provide evidence showing that PGCs are specified by inheritance of maternally supplied germplasm. Furthermore, we demonstrate that the migratory mechanism is well-conserved between sturgeon and other remotely related teleosts, such as goldfish, by a single PGCs transplantation (SPT) assay. The mode of PGCs specification in sturgeon is similar to that of anurans, but the migration pattern resembles that of teleosts. PMID:24505272
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Soil moisture and vegetation patterns in northern California forests
James R. Griffin
1967-01-01
Twenty-nine soil-vegetation plots were studied in a broad transect across the southern Cascade Range. Variations in soil moisture patterns during the growing season and in soil moisture tension values are discussed. Plot soil moisture values for 40- and 80-cm. depths in August and September are integrated into a soil drought index. Vegetation patterns are described in...
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Signal and noise in vegetation patterns in drylands: distinguishing the baby from the bath water
NASA Astrophysics Data System (ADS)
Parsons, Anthony; Wainwright, John; Stewart, Jill; Okin, Gregory
2014-05-01
Patterns, and particularly banded patterns, are widely reported in dryland vegetation, and have been the subject of considerable modelling effort. However, much of this modelling effort is predicated on a mathematical approach that is designed to produce patterns and relies on physical processes that are unreasonable. In consequence, whereas in nature dryland vegetation patterns are irregular, disjointed and discontinuous, those produced by such models tend to be regular, continuous and even. The question, therefore, arises "Is it the irregularity, disjointed and discontinuous character of these patterns that holds the key to their formation rather than any apparent, human-imposed semblance of regularity and continuity?" By focusing on this apparent patterning have such models rejected as noise the key to understanding the signal? Models that produce regular vegetation patterns, typically do so by imposing global rules (largely for the distribution of water). Is it not more likely that vegetation responds to the local supply of water, nutrients and propagules? Here, we present a model for the growth of vegetation in deserts that is predicated on the local conditions of input of water, nutrients and propagules and output, such as loss of biomass by herbivory. The approach represents our best quantitative understanding of how desert ecosystems work. Patterns emerge that show the irregularity and discontinuity seen in nature. By focusing on the process rather than the patterns per se our model has the ability to address specific questions of the role of such patterns in land degradation. Further, it has the potential to provide quantitative estimates of the response of the landscape to specific management strategies, as well as the identification of the key thresholds and tipping points that are so important to the management of drylands. In providing a way to understand and predict the vegetation patterns that may develop during desertification, the approach also represents a crucial potential tool for its management and even reversal.
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Predicting the effect of fire on large-scale vegetation patterns in North America.
Donald McKenzie; David L. Peterson; Ernesto. Alvarado
1996-01-01
Changes in fire regimes are expected across North America in response to anticipated global climatic changes. Potential changes in large-scale vegetation patterns are predicted as a result of altered fire frequencies. A new vegetation classification was developed by condensing Kuchler potential natural vegetation types into aggregated types that are relatively...
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Liu, Yu; Wu, Bing-Fang; Zeng, Yuan; Zhang, Lei
2013-09-01
The integration of the effects of landscape pattern to the assessment of the impacts of soil erosion on eco-environmental is of practical significance in methodological prospect, being able to provide an approach for identifying water body's sediment source area, assessing the potential risks of sediment export of on-site soil erosion to the target water body, and evaluating the capacity of regional landscape pattern in preventing soil loss. In this paper, the RUSLE model was applied to simulate the on-site soil erosion rate. With the consideration of the soil retention potential of vegetation cover and topography, a quantitative assessment was conducted on the impacts of soil erosion in the water source region of the middle route for South-to-North Water Transfer Project on rivers and reservoirs by delineating landscape pattern at point (or cell) scale and sub-watershed level. At point (or grid cell) scale, the index of soil erosion impact intensity (I) was developed as an indicator of the potential risk of sediment export to the water bodies. At sub-watershed level, the landscape leakiness index (LI) was employed to indicate the sediment retention capacity of a given landscape pattern. The results revealed that integrating the information of landscape pattern and the indices of soil erosion process could spatially effectively reflect the impact intensity of in situ soil erosion on water bodies. The LI was significantly exponentially correlated to the mean sediment retention capacity of landscape and the mean vegetation coverage of watershed, and the sediment yield at sub-watershed scale was significantly correlated to the LI in an exponential regression. It could be concluded that the approach of delineating landscape pattern based on soil erosion process and the integration of the information of landscape pattern with its soil retention potential could provide a new approach for the risk evaluation of soil erosion.
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Groundwater controls on river channel pattern
NASA Astrophysics Data System (ADS)
Bätz, Nico; Colombini, Pauline; Cherubini, Paolo; Lane, Stuart N.
2017-04-01
Braided rivers are characterized by high rates of morphological change. However, despite the potential for frequent disturbance, vegetated patches may develop within this system and influence long-term channel dynamics and channel patterns through the "engineering effects" of vegetation. The stabilizing effect of developing vegetation on morphological change has been widely shown by flume experiments and (historic) aerial pictures analysis. Thus, there is a balance between disturbance and stabilization, mediated through vegetation, that may determine the long-term geomorphic and biogeomorphic evolution of the river. It follows that with a change in disturbance frequency relative to the rate of vegetation establishment, a systematic geomorphological shift could occur. Research has addressed how changes in disturbance frequency affect river channel pattern, but has rarely addressed the way in which the stabilizing effects of biogeomorphic succession interact with disturbance frequency to maintain a river in a more dynamic or a less dynamic state. Here, we quantify how the interplay between groundwater access, disturbance frequency and vegetation succession, drive changes in channel pattern. We studied this complex interplay on a transitional gravel-bed river system (braided, wandering, meandering) close to Geneva (Switzerland) - the Allondon River. Dendroecological analysis demonstrate that vegetation growth is driven by groundwater access. Groundwater access conditions the rate of vegetation stabilization at the sub-reach scale and, due to a reduction in flood-related disturbance frequency over the last 50 years, drives a change in channel pattern. Where groundwater is shallower, vegetation encroachment rates were high and as flood-related disturbance decreased, the river has shifted towards a meandering state. Where groundwater was deeper, vegetation growth was limited by water-access and thus vegetation encroachment rates were low. Even though there was a reduction in flood disturbance, it was still sufficient to maintain a wandering/braided state. Thus, it appears that access to groundwater can control river channel pattern through its impact upon the "engineering effects" of vegetation. The results are important for river management as they highlight the non-linearity of developing vegetation in dynamic alluvial floodplains and the importance of considering the wider environmental setting and associated feedbacks between biotic and abiotic river components in defining long-term geomorphological river response.
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Marques-Vidal, Pedro; Waeber, Gérard; Vollenweider, Peter; Guessous, Idris
2018-01-12
Food intake is a complex behaviour which can be assessed using dietary patterns. Our aim was to characterize dietary patterns and associated factors in French-speaking Switzerland. Cross-sectional study conducted between 2009 and 2012 in the city of Lausanne, Switzerland, including 4372 participants (54% women, 57.3 ± 10.3 years). Food consumption was assessed using a validated food frequency questionnaire. Dietary patterns were assessed by principal components analysis. Three patterns were identified: "Meat & fries"; "Fruits & Vegetables" and "Fatty & sugary". The "Meat & fries" pattern showed the strongest correlations with total and animal protein and cholesterol carbohydrates, dietary fibre and calcium. The "Fruits & Vegetables" pattern showed the strongest correlations with dietary fibre, carotene and vitamin D. The "Fatty & sugary" pattern showed the strongest correlations with total energy and saturated fat. On multivariate analysis, male gender, low educational level and sedentary status were positively associated with the "Meat & fries" and the "Fatty & sugary" patterns, and negatively associated with the "Fruits & Vegetables" pattern. Increasing age was inversely associated with the "Meat & fries" pattern; smoking status was inversely associated with the "Fruits & Vegetables" pattern. Being born in Portugal or Spain was positively associated with the "Meat & fries" and the "Fruits & Vegetables" patterns. Increasing body mass index was positively associated with the "Meat & fries" pattern and inversely associated with the "Fatty & sugary" pattern. Three dietary patterns, one healthy and two unhealthy, were identified in the Swiss population. Several associated modifiable behaviours were identified; the information on socio- demographic determinants allows targeting of the most vulnerable groups in the context of public health interventions.
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Early development of Xenopus embryos is affected by simulated gravity
NASA Technical Reports Server (NTRS)
Yokota, Hiroki; Neff, Anton W.; Malacinski, George M.
1994-01-01
Early amphibian (Xenopus laevis) development under clinostat-simulated weightlessness and centrifuge-simulated hypergravity was studied. The results revealed significant effects on (i) 'morphological patterning' such as the cleavage furrow pattern in the vegetal hemisphere at the eight-cell stage and the shape of the dorsal lip in early gastrulae and (ii) 'the timing of embryonic events' such as the third cleavage furrow completion and the dorsal lip appearance. Substantial variations in sensitivity to simulated force fields were observed, which should be considered in interpreting spaceflight data.
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Charles E. Swift; Kerri T. Vierling; Andrew T. Hudak; Lee A. Vierling
2017-01-01
Ecologists have a long-term interest in understanding the relative influence of vegetation composition and vegetation structure on avian diversity. LiDAR remote sensing is useful in studying local patterns of avian diversity because it characterizes fine-scale vegetation structure across broad extents. We used LiDAR, aerial and satellite imagery, and avian field data...
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Cell lineage patterns in the shoot meristem of the sunflower embryo in the dry seed
DOE Office of Scientific and Technical Information (OSTI.GOV)
Jegla, D.E.; Sussex, I.M.
1989-01-01
We mapped the fate of cells in the shoot meristem of the dry-seed embryo of sunflower, Helianthus annuus L. cv. Peredovic, using irradiation-induced somatic sectors. We analyzed 249 chlorophyll-deficient or glabrous (hairless) sectors generated in 236 plants. Most sectors observed in the inflorescence extended into vegetative nodes. Thus cell lineages that ultimately gave rise to reproductive structures also contributed to vegetative structures. No single sector extended the entire length of the shoot. Thus the shoot is not derived from one or a few apical initials. Rather, the position, vertical extent, and width of the sectors at different levels of themore » shoot suggest that the shoot is derived from three to four circumferential populations of cells in each of three cell layers of the embryo meristem. Sectors had no common boundaries even in plants with two or three independent sectors, but varied in extent and overlapped along the length of the shoot. Thus individual cells in a single circumferential population behaved independently to contribute lineages of different vertical extents to the growing shoot. The predicted number of circumferential populations of cells as well as the apparent cell number in each population was consistent with the actual number of cells in the embryo meristem observed in histological sections.« less
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Topographically-controlled site conditions drive vegetation pattern on inland dunes in Poland
NASA Astrophysics Data System (ADS)
Sewerniak, Piotr; Jankowski, Michał
2017-07-01
The inland dunes of Central Europe are commonly overplanted by Scots pine (Pinus sylvestris) monocultures in which the primary occurrence of the natural vegetation pattern is obliterated. We hypothesize that on naturally revegetated inland dunes the pattern is clear and driven by topographically-controlled site conditions. To test this hypothesis, we addressed the following research questions: (1) Does topography drive vegetation patterns on inland dunes and if so, what are main differences between vegetation in varying relief positions? (2) To what extent does topography involve the variability of microclimates and of soil properties, and how does the topographically-induced differentiation of these site conditions control vegetation patterns? We conducted interdisciplinary studies (applying floristic, pedological and microclimatic research techniques) on a naturally revegetated inland dune area situated on a military artillery training ground near Toruń, northern Poland. We investigated vegetation patterns with reference to three topographical position variants (north-facing slopes, south-facing slopes, and intra-dune depressions). We found distinct differences in vegetation characteristics covering the aforementioned topographical positions. This primarily concerned species composition of ground vegetation: Calluna vulgaris was dominant species on north-facing slopes, Corynephorus canescens on south-facing slopes, while Calamagrostis epigejos in intra-dune depressions. In comparison to dune slopes, the depressions were characterized by much higher biodiversity of vascular plant species. This followed the most favorable soil conditions for the existence of plants (higher moisture and nutrient pools) occurring in low topographical positions. However, tree succession was most advanced not in depressions, where the competitive impact of tall grasses on seedlings was recognized, but on north-facing slopes. Based on our results, we formulated some suggestions, which could be useful for both practical foresters to increase biodiversity of ecosystems and for practices that work on the fixation of dunes by restoring vegetation.
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Mazza, Paola; Noens, Elke E; Schirner, Kathrin; Grantcharova, Nina; Mommaas, A Mieke; Koerten, Henk K; Muth, Günther; Flärdh, Klas; van Wezel, Gilles P; Wohlleben, Wolfgang
2006-05-01
MreB forms a cytoskeleton in many rod-shaped bacteria which is involved in cell shape determination and chromosome segregation. PCR-based and Southern analysis of various actinomycetes, supported by analysis of genome sequences, revealed mreB homologues only in genera that form an aerial mycelium and sporulate. We analysed MreB in one such organism, Streptomyces coelicolor. Ectopic overexpression of mreB impaired growth, and caused swellings and lysis of hyphae. A null mutant with apparently normal vegetative growth was generated. However, aerial hyphae of this mutant were swelling and lysing; spores doubled their volume and lost their characteristic resistance to stress conditions. Loss of cell wall consistency was observed in MreB-depleted spores by transmission electron microscopy. An MreB-EGFP fusion was constructed to localize MreB in the mycelium. No clearly localized signal was seen in vegetative mycelium. However, strong fluorescence was observed at the septa of sporulating aerial hyphae, then as bipolar foci in young spores, and finally in a ring- or shell-like pattern inside the spores. Immunogold electron microscopy using MreB-specific antibodies revealed that MreB is located immediately underneath the internal spore wall. Thus, MreB is not essential for vegetative growth of S. coelicolor, but exerts its function in the formation of environmentally stable spores, and appears to primarily influence the assembly of the spore cell wall.
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Mariscal, Vicente; Nürnberg, Dennis J; Herrero, Antonia; Mullineaux, Conrad W; Flores, Enrique
2016-09-01
Filamentous, N2 -fixing, heterocyst-forming cyanobacteria grow as chains of cells that are connected by septal junctions. In the model organism Anabaena sp. strain PCC 7120, the septal protein SepJ is required for filament integrity, normal intercellular molecular exchange, heterocyst differentiation, and diazotrophic growth. An Anabaena strain overexpressing SepJ made wider septa between vegetative cells than the wild type, which correlated with a more spread location of SepJ in the septa as observed with a SepJ-GFP fusion, and contained an increased number of nanopores, the septal peptidoglycan perforations that likely accommodate septal junctions. The septa between heterocysts and vegetative cells, which are narrow in wild-type Anabaena, were notably enlarged in the SepJ-overexpressing mutant. Intercellular molecular exchange tested with fluorescent tracers was increased for the SepJ-overexpressing strain specifically in the case of calcein transfer between vegetative cells and heterocysts. These results support an association between calcein transfer, SepJ-related septal junctions, and septal peptidoglycan nanopores. Under nitrogen deprivation, the SepJ-overexpressing strain produced an increased number of contiguous heterocysts but a decreased percentage of total heterocysts. These effects were lost or altered in patS and hetN mutant backgrounds, supporting a role of SepJ in the intercellular transfer of regulatory signals for heterocyst differentiation. © 2016 John Wiley & Sons Ltd.
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USDA-ARS?s Scientific Manuscript database
An Arabidopsis pollen grain (male gametophyte) consists of three cells: the vegetative cell, which forms the pollen tube, and two sperm cells enclosed within the vegetative cell. It is still unclear if there is intercellular communication between the vegetative cell and the sperm cells. Here we show...
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Gómez-Mena, Concepción; Sablowski, Robert
2008-08-01
Apical meristems play a central role in plant development. Self-renewing cells in the central region of the shoot meristem replenish the cell population in the peripheral region, where organ primordia emerge in a predictable pattern, and in the underlying rib meristem, where new stem tissue is formed. While much is known about how organ primordia are initiated and their lateral boundaries established, development at the interface between the stem and the meristem or the lateral organs is poorly understood. Here, we show that the BELL-type ARABIDOPSIS THALIANA HOMEOBOX GENE1 (ATH1) is required for proper development of the boundary between the stem and both vegetative and reproductive organs and that this role partially overlaps with that of CUP-SHAPED COTYLEDON genes. During the vegetative phase, ATH1 also functions redundantly with light-activated genes to inhibit growth of the region below the shoot meristem. Consistent with a role in inhibiting stem growth, ATH1 is downregulated at the start of inflorescence development and ectopic ATH1 expression prevents growth of the inflorescence stem by reducing cell proliferation. Thus, ATH1 modulates growth at the interface between the stem, meristem, and organ primordia and contributes to the compressed vegetative habit of Arabidopsis thaliana.
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NASA Astrophysics Data System (ADS)
Mohseni, Neda; Hosseinzadeh, Seyed Reza; Sepehr, Adel; Golzarian, Mahmood Reza; Shabani, Farzin
2017-08-01
Debris flow fans are non-equilibrium landforms resulting from the spatial variations of debris flows deposited on them. This geomorphic disturbance involving the asymmetric redistribution of water and sediment may create spatially heterogeneous patterns of soil-vegetation along landforms. In this research, founded on field-based observations, we characterized the spatial patterns of some soil (e.g., particle size distribution including fine and coarse covers, and infiltration capacity) and vegetation (e.g., plant distance, vegetation density, patch size, and average number of patches) properties within different debris flow fan positions (Upper, Middle, and Lower fan) located at the base of the Binaloud Mountain hillslope in northeastern Iran. Thereafter, using a mathematical model of dry land vegetation dynamics, we calculated response trends of the different positions to the same environmental harshness gradient. Field measurements of soil-vegetation properties and infiltration rates showed that the asymmetric redistribution of debris flow depositions can cause statistically significant differences (P < 0.05) in the spatial patterns of soil and eco-hydrological characteristics along different landform positions. The results showed that mean plant distance, mean vegetation density, and the average number of patches decreased as the coarse covers increased toward the Lower fan plots. Conversely, an increase in infiltration rate was observed. The simulation results on the aerial images taken from different positions, illustrated that positions with a heterogeneous distribution of vegetation patterns were not desertified to the same degree of aridity. Thus, the Middle and Lower positions could survive under harsher aridity conditions, due to the emergence of more varied spatial vegetation patterns than at the Upper fan position. The findings, based on a combined field and modeling approach, highlighted that debris flow as a geomorphic process with the asymmetric distribution of depositions on the gentle slope of an alluvial fan, can incur multiple resilience thresholds with different degrees of self-organization under stressful conditions over the spatial heterogeneities of soil-dependent vegetation structures.
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Dietary patterns and breast cancer risk in a prospective Japanese study.
Kojima, Reiji; Okada, Emiko; Ukawa, Shigekazu; Mori, Mitsuru; Wakai, Kenji; Date, Chigusa; Iso, Hiroyasu; Tamakoshi, Akiko
2017-01-01
The association between dietary patterns and breast cancer has been inconsistent. This study examined associations between dietary patterns and risk of developing breast cancer among 23,172 women from the Japan Collaborative Cohort Study, including 119 incidences of breast cancer diagnosed during a median 16.9-year follow-up period. Factor analysis was conducted to obtain dietary patterns, and Cox proportional models were used to estimate hazard ratios (HR) and 95 % confidence intervals (95 % CI) for breast cancer morbidity. Three dietary patterns were identified: ''vegetable pattern'' (vegetables, potatoes, seaweed, tofu, fruits, fresh fish, eggs, and miso soup); ''animal food pattern'' (meat, deep-fried foods, fried vegetables, fish paste and salt-preserved fish); and "dairy product pattern'' (milk, dairy products, fruits, coffee and tea). After adjusting for potential confounders, the vegetable and dairy product patterns were not significantly associated with risk of breast cancer. However, the animal food pattern was significantly associated with a decreased risk of breast cancer morbidity among premenopausal women by HR 0.47 for the 2nd tertile (95 % CI 0.22-1.00) and HR 0.42 for the 3rd tertile (95 % CI 0.18-0.93), compared with the bottom tertile (p for trend 0.04). We found no significant association between the vegetable and dairy product dietary patterns and breast cancer risk; however, an animal product diet may reduce risk of breast cancer among premenopausal Japanese women.
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Patterns of vegetation in the Owens Valley, California
NASA Technical Reports Server (NTRS)
Ustin, S. L.; Rock, B. N.; Woodward, R. A.
1986-01-01
Spectral characteristics of semi-arid shrub communities were examined using Airborne Imaging Spectrometer (AIS) data collected in the tree mode on 23 May 1985. Mesic sites with relatively high vegetation density and distinct zonation patterns exhibited greater spectral signature variations than sites with more xeric shrub communities. Spectral signature patterns were not directly related to vegetation density or physiognomy, although spatial maps derived from an 8-channel maximum likelihood classification were supported by photo-interpreted surface features. In AIS data, the principal detected effect of shrub vegetation on the alluvial fans is to lower reflectance across the spectrum. These results are similar to those reported during a period of minimal physiological activity in autumn, indicating that shadows cast by vegetation canopies are an important element of soil-vegetation interaction under conditions of relatively low canopy cover.
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USDA-ARS?s Scientific Manuscript database
The majority of research on savanna vegetation dynamics has focused on the coexistence of woody and herbaceous vegetation; interactions among woody plants in savannas are relatively poorly understood. We present data from a 10-year longitudinal study of spatially explicit growth patterns of woody ve...
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Fatty Acids of Myxococcus xanthus
Ware, Judith C.; Dworkin, Martin
1973-01-01
Fatty acids were extracted from saponified vegetative cells and myxospores of Myxococcus xanthus and examined as the methyl esters by gas-liquid chromatography. The acids consisted mainly of C14 to C17 species. Branched acids predominated, and iso-pentadecanoic acid constituted half or more of the mixture. The other leading component (11–28%) was found to be 11-n-hexadecenoic acid. Among the unsaturated acids were two diunsaturated ones, an n-hexadecadienoic acid and an iso-heptadecadienoic acid. No significant differences between the fatty acid compositions of the vegetative cells and myxospores could be detected. The fatty acid composition of M. xanthus was found to be markedly similar to that of Stigmatella aurantiaca. It is suggested that a fatty acid pattern consisting of a large proportion of iso-branched C15 and C17 acids and a substantial amount of an n-16:1 acid is characteristic of myxobacteria. PMID:4197903
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Asynchronous vegetation phenology enhances winter body condition of a large mobile herbivore.
Searle, Kate R; Rice, Mindy B; Anderson, Charles R; Bishop, Chad; Hobbs, N T
2015-10-01
Understanding how spatial and temporal heterogeneity influence ecological processes forms a central challenge in ecology. Individual responses to heterogeneity shape population dynamics, therefore understanding these responses is central to sustainable population management. Emerging evidence has shown that herbivores track heterogeneity in nutritional quality of vegetation by responding to phenological differences in plants. We quantified the benefits mule deer (Odocoileus hemionus) accrue from accessing habitats with asynchronous plant phenology in northwest Colorado over 3 years. Our analysis examined both the direct physiological and indirect environmental effects of weather and vegetation phenology on mule deer winter body condition. We identified several important effects of annual weather patterns and topographical variables on vegetation phenology in the home ranges of mule deer. Crucially, temporal patterns of vegetation phenology were linked with differences in body condition, with deer tending to show poorer body condition in areas with less asynchronous vegetation green-up and later vegetation onset. The direct physiological effect of previous winter precipitation on mule deer body condition was much less important than the indirect effect mediated by vegetation phenology. Additionally, the influence of vegetation phenology on body fat was much stronger than that of overall vegetation productivity. In summary, changing annual weather patterns, particularly in relation to seasonal precipitation, have the potential to alter body condition of this important ungulate species during the critical winter period. This finding highlights the importance of maintaining large contiguous areas of spatially and temporally variable resources to allow animals to compensate behaviourally for changing climate-driven resource patterns.
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NASA Astrophysics Data System (ADS)
Youssef, Feras; Visser, Saskia M.; Karssenberg, Derek; Erpul, Gunay; Cornelis, Wim M.; Gabriels, Donald; Poortinga, Ate
2012-07-01
Wind erosion is a global environmental problem. Re-vegetating land is a commonly used method to reduce the negative effects of wind erosion. However, there is limited knowledge on the effect of vegetation pattern on wind-blown mass transport. The objective of this study was to investigate the effect of vegetation pattern on this phenomenon within a land unit and at the border between land units. Wind tunnel experiments were conducted with artificial shrubs representing Atriplex halimus. Wind runs at a speed of 11 m s- 1 were conducted and sand translocation was measured after 200-230 s using a graph paper prepared for this purpose. This research showed that: 1) the transport within a land unit is affected by the neighboring land units and by the vegetation pattern within both the unit itself and the neighboring land units; 2) re-vegetation plans for degraded land can take into account the 'streets' effect (zones of erosion areas similar to streets); 3) the effect of neighboring land units includes sheltering effect and the regulation of sediment passing from one land unit to the neighboring land units and 4) in addition to investigation of the general effect of vegetation pattern on erosion and deposition within the region, it is important to investigate the redistribution of sediment at smaller scales depending on the scope of the project.
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Dietary pattern classifications with nutrient intake and health-risk factors in Korean men.
Lee, Ji Eun; Kim, Jung-Hyun; Son, Say Jin; Ahn, Younjhin; Lee, Juyoung; Park, Chan; Lee, Lilha; Erickson, Kent L; Jung, In-Kyung
2011-01-01
This study was performed to identify dietary patterns in Korean men and to determine the associations among dietary patterns, nutrient intake, and health-risk factors. Using baseline data from the Korean Health and Genome Study, dietary patterns were identified using factor analysis of data from a validated food-frequency questionnaire, and associations between these dietary patterns and health-risk factors were analyzed. Three dietary patterns were identified: 1) the "animal-food" pattern (greater intake of meats, fish, and dairy products), 2) the "rice-vegetable" pattern (greater intake of rice, tofu, kimchi, soybean paste, vegetables, and seaweed), and 3) the "noodle-bread" pattern (greater intake of instant noodles, Chinese noodles, and bread). The animal-food pattern (preferred by younger people with higher income and education levels) had a positive correlation with obesity and hypercholesterolemia, whereas the rice-vegetable pattern (preferred by older people with lower income and educational levels) was positively associated with hypertension. The noodle-bread pattern (also preferred by younger people with higher income and education levels) had a positive association with abdominal obesity and hypercholesterolemia. This study identifies three unique dietary patterns in Korean men, which are independently associated with certain health-risk factors. The rice-vegetable dietary pattern, modified for a low sodium intake, might be a healthy dietary pattern for Korean men. Copyright © 2011 Elsevier Inc. All rights reserved.
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NASA Astrophysics Data System (ADS)
Yousefi Lalimi, F.; Silvestri, S.; Moore, L. J.; Marani, M.
2017-01-01
Vegetation plays a key role in stabilizing coastal dunes and barrier islands by mediating sand transport, deposition, and erosion. Dune topography, in turn, affects vegetation growth, by determining local environmental conditions. However, our understanding of vegetation and dune topography as coupled and spatially extensive dynamical systems is limited. Here we develop and use remote sensing analyses to quantitatively characterize coastal dune ecotopographic patterns by simultaneously identifying the spatial distribution of topographic elevation and vegetation biomass. Lidar-derived leaf area index and hyperspectral-derived normalized difference vegetation index patterns yield vegetation distributions at the whole-system scale which are in agreement with each other and with field observations. Lidar-derived concurrent quantifications of biomass and topography show that plants more favorably develop on the landward side of the foredune crest and that the foredune crestline marks the position of an ecotone, which is interpreted as the result of a sheltering effect sharply changing local environmental conditions. We conclude that the position of the foredune crestline is a chief ecomorphodynamic feature resulting from the two-way interaction between vegetation and topography.
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DOE Office of Scientific and Technical Information (OSTI.GOV)
Kebrom, Tesfamichael H.; McKinley, Brian; Mullet, John E.
Bioenergy sorghum accumulates 75% of shoot biomass in stem internodes. Grass stem internodes are formed during vegetative growth and elongate in response to developmental and environmental signals. To identify genes and molecular mechanisms that modulate the extent of internode growth, we conducted microscopic and transcriptomic analyses of four successive sub-apical vegetative internodes representing different stages of internode development of the bioenergy sorghum genotype R.07020. Stem internodes of sorghum genotype R.07020 are formed during the vegetative phase and their length is enhanced by environmental signals such as shade and floral induction in short days. During vegetative growth, the first visible andmore » youngest sub-apical internode was ~0.7 cm in length, whereas the fourth fully expanded internode was ~5 cm in length. Microscopic analyses revealed that all internode tissue types including pith parenchyma and vascular bundles are present in the four successive internodes. Growth in the first two sub-apical internodes occurred primarily through an increase in cell number consistent with expression of genes involved in the cell cycle and DNA replication. Growth of the 3rd internode was associated with an increase in cell length and growth cessation in the 4th internode was associated with up-regulation of genes involved in secondary cell wall deposition. The expression of genes involved in hormone metabolism and signaling indicates that GA, BR, and CK activity decreased while ethylene, ABA, and JA increased in the 3rd/4th internodes. While the level of auxin appears to be increasing as indicated by the up-regulation of ARFs, down-regulation of TIR during development indicates that auxin signaling is also modified. The expression patterns of transcription factors are closely associated with their role during the development of the vegetative internodes. Microscopic and transcriptome analyses of four successive sub-apical internodes characterized the developmental progression of vegetative stem internodes from initiation through full elongation in the sorghum genotype R.07020. Transcriptome profiling indicates that dynamic variation in the levels and action of GA, CK, IAA, BR, ethylene, ABA, and JA modulate gene expression and growth during internode growth and development. Thus, this study provides detailed microscopic and transcriptomic data useful for identifying genes and molecular pathways regulating internode elongation in response to various developmental and environmental signals.« less
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Kebrom, Tesfamichael H.; McKinley, Brian; Mullet, John E.
2017-06-21
Bioenergy sorghum accumulates 75% of shoot biomass in stem internodes. Grass stem internodes are formed during vegetative growth and elongate in response to developmental and environmental signals. To identify genes and molecular mechanisms that modulate the extent of internode growth, we conducted microscopic and transcriptomic analyses of four successive sub-apical vegetative internodes representing different stages of internode development of the bioenergy sorghum genotype R.07020. Stem internodes of sorghum genotype R.07020 are formed during the vegetative phase and their length is enhanced by environmental signals such as shade and floral induction in short days. During vegetative growth, the first visible andmore » youngest sub-apical internode was ~0.7 cm in length, whereas the fourth fully expanded internode was ~5 cm in length. Microscopic analyses revealed that all internode tissue types including pith parenchyma and vascular bundles are present in the four successive internodes. Growth in the first two sub-apical internodes occurred primarily through an increase in cell number consistent with expression of genes involved in the cell cycle and DNA replication. Growth of the 3rd internode was associated with an increase in cell length and growth cessation in the 4th internode was associated with up-regulation of genes involved in secondary cell wall deposition. The expression of genes involved in hormone metabolism and signaling indicates that GA, BR, and CK activity decreased while ethylene, ABA, and JA increased in the 3rd/4th internodes. While the level of auxin appears to be increasing as indicated by the up-regulation of ARFs, down-regulation of TIR during development indicates that auxin signaling is also modified. The expression patterns of transcription factors are closely associated with their role during the development of the vegetative internodes. Microscopic and transcriptome analyses of four successive sub-apical internodes characterized the developmental progression of vegetative stem internodes from initiation through full elongation in the sorghum genotype R.07020. Transcriptome profiling indicates that dynamic variation in the levels and action of GA, CK, IAA, BR, ethylene, ABA, and JA modulate gene expression and growth during internode growth and development. Thus, this study provides detailed microscopic and transcriptomic data useful for identifying genes and molecular pathways regulating internode elongation in response to various developmental and environmental signals.« less
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Plant toxins and trophic cascades alter fire regime and succession on a boral forest landscape
Feng, Zhilan; Alfaro-Murillo, Jorge A.; DeAngelis, Donald L.; Schmidt, Jennifer; Barga, Matthew; Zheng, Yiqiang; Ahmad Tamrin, Muhammad Hanis B.; Olson, Mark; Glaser, Tim; Kielland, Knut; Chapin, F. Stuart; Bryant, John
2012-01-01
Two models were integrated in order to study the effect of plant toxicity and a trophic cascade on forest succession and fire patterns across a boreal landscape in central Alaska. One of the models, ALFRESCO, is a cellular automata model that stochastically simulates transitions from spruce dominated 1 km2 spatial cells to deciduous woody vegetation based on stochastic fires, and from deciduous woody vegetation to spruce based on age of the cell with some stochastic variation. The other model, the ‘toxin-dependent functional response’ model (TDFRM) simulates woody vegetation types with different levels of toxicity, an herbivore browser (moose) that can forage selectively on these types, and a carnivore (wolf) that preys on the herbivore. Here we replace the simple succession rules in each ALFRESCO cell by plant–herbivore–carnivore dynamics from TDFRM. The central hypothesis tested in the integrated model is that the herbivore, by feeding selectively on low-toxicity deciduous woody vegetation, speeds succession towards high-toxicity evergreens, like spruce. Wolves, by keeping moose populations down, can help slow the succession. Our results confirmed this hypothesis for the model calibrated to the Tanana floodplain of Alaska. We used the model to estimate the effects of different levels of wolf control. Simulations indicated that management reductions in wolf densities could reduce the mean time to transition from deciduous to spruce by more than 15 years, thereby increasing landscape flammability. The integrated model can be useful in estimating ecosystem impacts of wolf control and moose harvesting in central Alaska.
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NASA Astrophysics Data System (ADS)
Callegaro, Chiara; Ursino, Nadia
2016-04-01
Self-organizing vegetation patterns are natural water harvesting systems in arid and semi-arid regions of the world and should be imitated when designing man-managed water-harvesting systems for rain-fed crop. Disconnected vegetated and bare zones, functioning as a source-sink system of resources, sustain vegetation growth and reduce water and soil losses. Mechanisms such as soil crusting over bare areas and soil loosening in vegetated areas feed back to the local net facilitation effect and contribute to maintain the patterned landscape structure. Dis-connectivity of run-off production and run-on infiltration sites reduces runoff production at the landscape scale, and increases water retention in the vegetated patches. What is the effect of species adaptation to different resource niches on the landscape structure? A minimal model for two coexisting species and soil moisture balance was formulated, to improve our understanding of the effects of species differentiation on the dynamics of plants and water at single-pattern and landscape scale within a tiger bush type ecosystem. A basic assumption of our model was that soil moisture availability is a proxy for the environmental niche of plant species. Connectivity and dis-connectivity of specific niches of adaptation of two differing plant species was an input parameter of our model, in order to test the effect of coexistence on the ecosystem structure. The ecosystem structure is the model outcome, including: patterns persistence of coexisting species; patterns persistence of one species with exclusion of the other; patterns decline with just one species surviving in a non organized structure; bare landscape with loss of both species. Results suggest that pattern-forming-species communities arise as a result of complementary niche adaptation (niche dis-connecivity), whereas niche superposition (niche connectivity) may lead to impoverishment of environmental resources and loss of vegetation cover and diversity.
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NASA Astrophysics Data System (ADS)
Zu, Jiaxing; Zhang, Yangjian; Huang, Ke; Liu, Yaojie; Chen, Ning; Cong, Nan
2018-07-01
Climate change is receiving mounting attentions from various fields and phenology is a commonly used indicator signaling vegetation responses to climate change. Previous phenology studies have mostly focused on vegetation greening-up and its climatic driving factors, while autumn phenology has been barely touched upon. In this study, vegetation phenological metrics were extracted from MODIS NDVI data and their temporal and spatial patterns were explored on the Tibetan Plateau (TP). The results showed that the start of season (SOS) has significantly earlier trend in the first decade, while the end of season (EOS) has slightly (not significant) earlier trend. In the spatial dimension, similar patterns were also identified. The SOS plays a more significant role in regulating vegetation growing season length than EOS does. The EOS and driving effects from each factor exhibited spatially heterogeneous patterns. Biological factor is the dominant factor regulating the spatial pattern of EOS, while climate factors control its inter-annual variation.
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Tang, Guoping; Shafer, Sarah L.; Barlein, Patrick J.; Holman, Justin O.
2009-01-01
Prognostic vegetation models have been widely used to study the interactions between environmental change and biological systems. This study examines the sensitivity of vegetation model simulations to: (i) the selection of input climatologies representing different time periods and their associated atmospheric CO2 concentrations, (ii) the choice of observed vegetation data for evaluating the model results, and (iii) the methods used to compare simulated and observed vegetation. We use vegetation simulated for Asia by the equilibrium vegetation model BIOME4 as a typical example of vegetation model output. BIOME4 was run using 19 different climatologies and their associated atmospheric CO2 concentrations. The Kappa statistic, Fuzzy Kappa statistic and a newly developed map-comparison method, the Nomad index, were used to quantify the agreement between the biomes simulated under each scenario and the observed vegetation from three different global land- and tree-cover data sets: the global Potential Natural Vegetation data set (PNV), the Global Land Cover Characteristics data set (GLCC), and the Global Land Cover Facility data set (GLCF). The results indicate that the 30-year mean climatology (and its associated atmospheric CO2 concentration) for the time period immediately preceding the collection date of the observed vegetation data produce the most accurate vegetation simulations when compared with all three observed vegetation data sets. The study also indicates that the BIOME4-simulated vegetation for Asia more closely matches the PNV data than the other two observed vegetation data sets. Given the same observed data, the accuracy assessments of the BIOME4 simulations made using the Kappa, Fuzzy Kappa and Nomad index map-comparison methods agree well when the compared vegetation types consist of a large number of spatially continuous grid cells. The results of this analysis can assist model users in designing experimental protocols for simulating vegetation.
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Upland and wetland vegetation establishment on coal slurry in northern Missouri
DOE Office of Scientific and Technical Information (OSTI.GOV)
Skeel, V.A.; Nawrot, J.R.
Since the Cooperative Wildlife Research Laboratory`s (CWRL) Mined Land Reclamation Program`s first establishment of a wetland on slurry in 1976, industry, state, and federal agency interest in reclamation alternatives for inactive slurry has increased. CWRL has been involved in pre-reclamation site characterization and monitoring for inactive slurry impoundments throughout Illinois, Indiana, Kansas, Kentucky, Missouri, and Washington. Geochemical site characterization of three slurry impoundments at the AECI Bee Veer Mine located near Macon, Missouri began in April 1990. A substrate sampling grid was established for all slurry impoundments with a centerline orientated parallel to the discharge to decant flow pattern. Surfacemore » (0--6 in.) and subsurface (30--36 in.) slurry samples were collected annually and analyzed for acid-base balance, immediate acidity macro- and micro-nutrients, potential phytotoxic metallic ions and salts, and texture. Water table elevations and water quality were monitored quarterly from shallow ({le}12 ft.) piezometers. General reclamation plans included annual (3 years) incremental limestone amendments (35--50 tons/acre) and direct vegetation establishment. Cool and warm season grasses dominate vegetation cover in upland habitats (slurry cell RDA1) while wetland habitats (palustrine emergent seasonally-permanently inundated) have been established in slurry cells (RDA2 and RDA3). Isolated hot spots continue to be amended with limestone and supplemental vegetation establishment is scheduled.« less
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Serra J. Hoagland; Paul Beier; Danny Lee
2018-01-01
Most uses of remotely sensed satellite data to characterize wildlife habitat have used metrics such as mean NDVI (Normalized Difference Vegetation Index) in a year or season. These simple metrics do not take advantage of the temporal patterns in NDVI within and across years and the spatial arrangement of cells with various temporal NDVI signatures. Here we use 13 years...
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Diet, interleukin-17, and childhood asthma in Puerto Ricans.
Han, Yueh-Ying; Forno, Erick; Brehm, John M; Acosta-Pérez, Edna; Alvarez, María; Colón-Semidey, Angel; Rivera-Soto, Winna; Campos, Hannia; Litonjua, Augusto A; Alcorn, John F; Canino, Glorisa; Celedón, Juan C
2015-10-01
Dietary patterns might influence the pathogenesis of asthma in Puerto Ricans, the ethnic group most affected by this disease in the United States. To examine the association among diet, T-helper cell type 17 cytokines, and asthma in Puerto Rican children. As part of a case-control study of 678 Puerto Rican children 6 to 14 years old in San Juan, participants completed a 75-item questionnaire on the child's food consumption in the prior week. Foods were aggregated into 7 groups: fruits, vegetables, grains, protein foods, dairy, fats, and sweets. Logistic regression was used to evaluate consumption frequency of each group, plasma T-helper cell type 17 cytokine levels, and asthma. Based on this analysis, a food score (range -2 [unhealthy diet: high consumption of dairy products and sweets, low consumption of vegetables and grains] to +2 [healthy diet: high consumption of grains and vegetables, low consumption of dairy and sweets]) was created to identify dietary patterns. High consumption of grains was associated with lower odds of asthma (adjusted odds ratio [aOR] 0.52, 95% confidence interval [CI] 0.33-0.82), whereas frequent consumption of dairy products (aOR 1.93, 95% CI 1.32-2.84) or sweets (aOR 1.82, 95% CI 1.08-2.72) was associated with higher odds of asthma. A healthier diet (each 1-point increment in food score) was associated with lower levels of interleukin-17F (β = -1.48 pg/mL, 95% CI -1.78 to -1.20) and with 36% decreased odds of asthma (aOR 0.64, 95% CI 0.53-0.77). A healthy diet, with frequent consumption of vegetables and grains and low consumption of dairy products and sweets, was associated with lower levels of interleulin-17F and decreased odds of childhood asthma in Puerto Ricans. Copyright © 2015. Published by Elsevier Inc.
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Hohman, Emily E; Paul, Ian M; Birch, Leann L; Savage, Jennifer S
2017-01-01
To determine whether a responsive parenting (RP) intervention affects infant dietary patterns. Primiparous mother-newborn dyads (n = 291) were randomized to the Intervention Nurses Start Infants Growing on Healthy Trajectories (INSIGHT) RP intervention or control. Curricula were delivered at nurse home visits at ages 3, 16, 28, and 40 weeks. RP group feeding guidance advised responsive feeding, delayed introduction of solids, repeated exposure to novel foods, and age-appropriate portion sizes. Latent class analysis identified patterns of dietary exposure at 9 months. Class membership at 9 months was used to predict BMI percentile at 2 years. Five dietary patterns were identified: "Breastfed, Fruits and Vegetables," "Breastfed, Low Variety," "Formula, Fruits and Vegetables," "Formula, Low Variety," and "Formula, High Energy Density." Over 60% of infants had patterns low in fruits and vegetables or high in energy-dense foods. RP group infants were less likely than control to be in the "Formula, Low Variety" class (OR = 0.40, 95% CI 0.23-0.71) or "Formula, High Energy Density" class (OR = 0.28, 95% CI 0.12-0.61) relative to the "Formula, Fruits and Vegetables" class. Dietary pattern at 9 months was significantly associated with BMI percentile at 2 years. While a majority of infants consumed diets low in fruits and vegetables, the INSIGHT RP intervention was associated with healthier dietary patterns. © 2016 The Obesity Society.
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Patrick, Heather; Nicklas, Theresa A; Hughes, Sheryl O; Morales, Miriam
2005-04-01
This research tested the associations between caregiver feeding styles and children's food consumption patterns among African-American (AA) and Hispanic (H) caregivers and their preschool children. Participants were 231 caregivers (101 AA; 130 H) with children enrolled in Head Start. Caregivers completed questionnaires on authoritarian and authoritative feeding styles (Caregiver's Feeding Styles Questionnaire; CFSQ) and various aspects of children's food consumption patterns (availability of, feeding attempts for, and child's consumption of dairy, fruit, and vegetables). Simultaneous multiple regression analyses tested the unique contribution of feeding styles in predicting food consumption patterns. Authoritative feeding was positively associated whereas authoritarian feeding was negatively associated with the availability of fruit and vegetables. Authoritative feeding was also positively associated with attempts to get the child to eat dairy, fruit, and vegetables, and reported child consumption of dairy and vegetables. Authoritarian feeding was negatively associated with child's vegetable consumption. All results remained significant after controlling for child's gender and body mass index (BMI), and caregiver's ethnicity, BMI, and level of education. Overall, results provide evidence for the benefits of authoritative feeding and suggest that interventions to increase children's consumption of dairy, fruit, and vegetables should be targeted toward increasing caregivers' authoritative feeding behaviors.
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Liu, Zhihua; Wimberly, Michael C
2016-01-15
We asked two research questions: (1) What are the relative effects of climate change and climate-driven vegetation shifts on different components of future fire regimes? (2) How does incorporating climate-driven vegetation change into future fire regime projections alter the results compared to projections based only on direct climate effects? We used the western United States (US) as study area to answer these questions. Future (2071-2100) fire regimes were projected using statistical models to predict spatial patterns of occurrence, size and spread for large fires (>400 ha) and a simulation experiment was conducted to compare the direct climatic effects and the indirect effects of climate-driven vegetation change on fire regimes. Results showed that vegetation change amplified climate-driven increases in fire frequency and size and had a larger overall effect on future total burned area in the western US than direct climate effects. Vegetation shifts, which were highly sensitive to precipitation pattern changes, were also a strong determinant of the future spatial pattern of burn rates and had different effects on fire in currently forested and grass/shrub areas. Our results showed that climate-driven vegetation change can exert strong localized effects on fire occurrence and size, which in turn drive regional changes in fire regimes. The effects of vegetation change for projections of the geographic patterns of future fire regimes may be at least as important as the direct effects of climate change, emphasizing that accounting for changing vegetation patterns in models of future climate-fire relationships is necessary to provide accurate projections at continental to global scales. Copyright © 2015 Elsevier B.V. All rights reserved.
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Dietary Patterns and Body Mass Index in Children with Autism and Typically Developing Children
ERIC Educational Resources Information Center
Evans, E. Whitney; Must, Aviva; Anderson, Sarah E.; Curtin, Carol; Scampini, Renee; Maslin, Melissa; Bandini, Linda
2012-01-01
To determine whether dietary patterns (juice and sweetened non-dairy beverages, fruits, vegetables, fruits and vegetables, snack foods, and kid's meals) and associations between dietary patterns and body mass index (BMI) differed between 53 children with autism spectrum disorders (ASD) and 58 typically developing children, ages 3-11, multivariate…
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On the role of patterns in understanding the functioning of soil-vegetation-atmosphere systems
USDA-ARS?s Scientific Manuscript database
In this paper, we review the role of patterns to improve our understanding of water, mass and energy exchange processes in soil-vegetation-atmosphere systems. We explore the main mechanisms that lead to the formation of patterns in these systems and discuss different approaches to characterizing and...
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Ecoregions as a level of ecological analysis
Wright, R.G.; Murray, M.P.; Merrill, T.
1998-01-01
There have been many attempts to classify geographic areas into zones of similar characteristics. Recent focus has been on ecoregions. We examined how well the boundaries of the most commonly used ecoregion classifications for the US matched the boundaries of existing vegetation cover mapped at three levels of classification, fine, mid- and coarse scale. We analyzed ecoregions in Idaho, Oregon and Washington. The results were similar among the two ecoregion classifications. For both ecoregion delineations and all three vegetation classifications, the patterns of existing vegetation did not correspond well with the patterns of ecoregions. Most vegetation types had a small proportion of their total area in a given ecoregion. There was also no dominance by one or more vegetation types in any ecoregion and contrary to our hypothesis, the level of congruence of vegetation patterns with ecoregion boundaries decreased as the level of classification became more general. The implications of these findings on the use of ecoregions as a planning tool and in the development of land conservation efforts are discussed.
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NASA Astrophysics Data System (ADS)
Istanbulluoglu, Erkan; Yetemen, Omer
2016-04-01
In this study CHILD landscape evolution model (LEM) is used to study the role of solar radiation on the co-evolution of landscape morphology, vegetation patterns, and erosion rates in a central New Mexico catchment. In the study site north facing slopes (NFS) are characterized by steep diffusion-dominated planar hillslopes covered by co-exiting juniper pine and grass vegetation. South facing slopes (SFS) are characterized by shallow slopes and covered by sparse shrub vegetation. Measured short-term and Holocene-averaged erosion rates show higher soil loss on SFS than NFS. In this study CHILD LEM is first confirmed with ecohydrologic field data and used to systematically examine the co-evolution of topography, vegetation pattern, and erosion rates. Aspect- and network-control are identified as the two main topographic drivers of soil moisture and vegetation organization on the landscape. Landscape-scale and long-term implications of solar radiation driven ecohdrologic patterns emerged in modeled landscape: NFS supported denser vegetation cover and became steeper and planar, while on SFS vegetation grew sparser and slopes declined with more fluvial activity. At the landscape scale, these differential erosion processes led to asymmetric development of catchment forms, consistent with regional observations. While the general patterns of vegetation and topography were reproduced by the model using a stationary representation of the current climate, the observed differential Holocene erosion rates were captured by the model only when cyclic climate is used. This suggests sensitivity of Holocene erosion rates to long-term climate fluctuations.
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Biomarker patterns in present-day vegetation: consistency and variation - A study on plaggen soils
NASA Astrophysics Data System (ADS)
Kirkels, Frédérique; Jansen, Boris; Kalbitz, Karsten
2013-04-01
Biomarker patterns in present-day vegetation are commonly used as proxies to reconstruct paleo-vegetation composition, land use history and to elucidate carbon cycling. Plaggen soils are formed by diverse vegetational inputs during century-long plaggen (i.e. sod) application associated with plaggen-agriculture on poor soils in north-western Europe. This resulted in remarkably stable organic matter. Plant source identification by biomarkers could provide insight in yet unknown stabilization mechanisms and the fate of organic matter upon ongoing land use change. The current rationale behind biomarker-based source identification is that patterns observed in present-day vegetation are generally representative with little random variation. However, our knowledge on variability and consistency of biomarker patterns is yet scarce. Therefore, to assess the applicability of biomarkers for source identification in plaggen soils, we analyzed published n-alkane and n-alcohol patterns of species and their various parts which contribute(d) input to plaggen soils. We considered shrubs, trees and grass species and evaluated rescaled patterns (i.e. relative abundances in chain-length range C17-36), odd-over-even predominance (OEP) and predominant n-alkanes. In addition, we explicitly looked into potential sources of systematic variation, e.g. spatial variation (climate, site conditions), temporal variation (seasonality, ontogeny) and laboratory methodology (extraction technique: washing/shaking, Soxhlet/ASE, saponification). We found meaningful clustering of n-alkanes C27, C29, C31 and C33, allowing for clear distinction of input by shrubs, trees and grasses to plaggen soils. Combination of these homologues with complete n-alkane patterns (C17-36) and OEP enabled further differentiation, while n-alcohols patterns were less distinct. Current limitation is the lack of extended and diverse quantitative records on biomarker patterns, especially for n-alcohols, non-leaf and belowground tissues, which hindered full statistical analysis. On species level we also recognized outliers and spreading. Systematic variation was indicated among tree species according to spatial conditions and by ontogeny. Yet, observed effects were ambiguous for other variation sources. This study highlights clear opportunities for application of biomarker patterns for source identification and elucidation of stabilization processes in (plaggen) soils. At the same time, application is challenged by systematic variation. Further research is key to quantify controls, magnitude and potential correction factors for such systematic variation. This would validate the use of n-alkane and n-alcohol patterns across broad spatial and temporal scales or identify boundaries wherein their consistency is ensured. Likely, these challenges apply to vegetation in a broad perspective, transcending plaggen vegetation, as assessment and application of present-day vegetation patterns is emerging.
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NASA Astrophysics Data System (ADS)
Dildora, Aralova; Toderich, Kristina; Dilshod, Gafurov
2016-08-01
Steadily rising temperature anomalies in last decades are causing changes in vegetation patterns for sensitive to climate change in arid and semi-arid dryland ecosystems. After desiccation of the Aral Sea, Uzbekistan has been left with the challenge to develop drought and heat stress monitoring system and tools (e.g., to monitor vegetation status and/crop pattern dynamics) with using remote sensing technologies in broad scale. This study examines several climate parameters, NDVI and drought indexes within geostatistical method to predict further vegetation status in arid and semi-arid zones of landscapes. This approaches aimed to extract and utilize certain variable environmental data (temperature and precipitation) for assessment and inter-linkages of vegetation cover dynamics, specifically related to predict degraded and recovered zones or desertification process in the drylands due to scarcity of water resources and high risks of climate anomalies in fragile ecosystem of Uzbekistan.
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Meteorological factors associated with abundance of airborne fungal spores over natural vegetation
NASA Astrophysics Data System (ADS)
Crandall, Sharifa G.; Gilbert, Gregory S.
2017-08-01
The abundance of airborne fungal spores in agricultural and urban settings increases with greater air temperature, relative humidity, or precipitation. The same meteorological factors that affect temporal patterns in spore abundance in managed environments also vary spatially across natural habitats in association with differences in vegetation structure. Here we investigated how temporal and spatial variation in aerial spore abundance is affected by abiotic (weather) and biotic (vegetation) factors as a foundation for predicting how fungi may respond to changes in weather and land-use patterns. We measured the phenology of airborne fungal spores across a mosaic of naturally occurring vegetation types at different time scales to describe (1) how spore abundance changes over time, (2) which local meteorological variables are good predictors for airborne spore density, and (3) whether spore abundance differs across vegetation types. Using an air volumetric vacuum sampler, we collected spore samples at 3-h intervals over a 120-h period in a mixed-evergreen forest and coastal prairie to measure diurnal, nocturnal, and total airborne spore abundance across vegetation types. Spore samples were also collected at weekly and monthly intervals in mixed-evergreen forest, redwood forest, and maritime chaparral vegetation types from 12 field sites across two years. We found greater airborne spore densities during the wetter winter months compared to the drier summer months. Mean total spore abundance in the mixed-evergreen forest was twice than in the coastal prairie, but there were no significant differences in total airborne spore abundance among mixed-evergreen forest, redwood forest, and maritime chaparral vegetation types. Weekly and monthly peaks in airborne spore abundance corresponded with rain events and peaks in soil moisture. Overall, temporal patterns in meteorological factors were much more important in determining airborne fungal spore abundance than the vegetation type. This suggests that overall patterns of fungal spore dynamics may be predictable across heterogeneous landscapes based on local weather patterns.
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Hupp, C.R.; Rinaldi, M.
2007-01-01
Riparian vegetation distribution patterns and diversity relative to various fluvial geomorphic channel patterns, landforms, and processes are described and interpreted for selected rivers of Tuscany, Central Italy; with emphasis on channel evolution following human impacts. Field surveys were conducted along thirteen gauged reaches for species presence, fluvial landforms, and the type and amount of channel/riparian zone change. Inundation frequency of different geomorphic surfaces was determined, and vegetation data were analyzed using BDA (binary discriminate analysis) and DCA (detrended correspondence analysis) and related to hydrogeomorphology. Multivariate analyses revealed distinct quantitative vegetation patterns relative to six major fluvial geomorphic surfaces. DCA of the vegetation data also showed distinct associations of plants to processes of adjustment that are related to stage of channel evolution, and clearly separated plants along disturbance/landform/soil moisture gradients. Species richness increases from the channel bed to the terrace and on heterogeneous riparian areas, whereas species richness decreases from moderate to intense incision and from low to intense narrowing. ?? 2007 by Association of American Geographers.
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Deborah Ulinski Potter
1999-01-01
Previous publications discussed the results of my dissertation research on relationships between seasonality in precipitation and vegetation patterns at landscape scale. Summer precipitation at a study site in the Zuni Mountains, NM, was predicted from lightning strike and relative humidity data using multiple regression. Summer precipitation patterns were mapped using...
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Nardmann, Judith; Werr, Wolfgang
2006-12-01
In Arabidopsis, stem cell homeostasis in the shoot apical meristem (SAM) is controlled by a feedback loop between WUS and CLV functions. We have identified WUS orthologues in maize and rice by a detailed phylogenetic analysis of the WOX gene family and subsequent cloning. A single WUS orthologue is present in the rice genome (OsWUS), whereas the allotetraploid maize genome contains 2 WUS paralogues (ZmWUS1 and ZmWUS2). None of the isolated grass WUS orthologues displays an organizing center-type expression pattern in the vegetative SAM as in Arabidopsis. In contrast, the grass-specific expression patterns relate to the specification of new phytomers consistent with the transcriptional expression patterns of TD1 and FON1 (CLV1 orthologues of maize and rice, respectively). Moreover, the grass WUS and CLV1 orthologues are coexpressed in all reproductive meristems, where fasciation and supernumerary floral organs occur in td1 or fon1 loss-of-function mutants. The expression patterns of WUS orthologues in both grass species compared with those of dicots imply that major changes in WUS function, which are correlated with changes in CLV1 signaling, have occurred during angiosperm evolution and raise doubts about the uniqueness of the WUS/CLV antagonism in the maintenance of the shoot stem cell niche in grasses.
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Pretreatment dietary patterns, weight status, and head and neck squamous cell carcinoma prognosis123
Arthur, Anna E; Peterson, Karen E; Rozek, Laura S; Taylor, Jeremy MG; Light, Emily; Chepeha, Douglas B; Hébert, James R; Terrell, Jeffrey E; Wolf, Gregory T
2013-01-01
Background: Few studies have evaluated the association of diet and weight status with head and neck cancer outcomes. Objective: The purpose of this study was to determine whether pretreatment dietary patterns and weight status are associated with head and neck cancer prognosis. Design: This was a longitudinal study of 542 patients with newly diagnosed head and neck cancer who completed food-frequency questionnaires and health surveys before treatment. Clinical data were abstracted from medical records and the Social Security Death Index. Dietary patterns were identified by using principal component analysis. Cox proportional hazard models were used to examine the association of derived dietary patterns (fit by quintiles of exposure) and weight status with time to recurrence and survival, with control for covariates. Results: During the study period, there were 229 deaths and 184 recurrences. Two dietary patterns were identified: a whole-foods pattern (characterized by high intakes of vegetables, fruit, fish, poultry, and whole grains) and a Western pattern (characterized by high intakes of red and processed meats, refined grains, potatoes, and French fries). In multivariable analyses, significantly fewer deaths were observed in subjects most adherent to the whole-foods pattern (HR: 0.56; 95% CI: 0.34, 0.92; P-trend = 0.01). Subjects classified as overweight or obese had significantly fewer deaths (HR: 0.65; 95% CI: 0.49, 0.85; P = 0.001) and recurrences (HR: 0.70; 95% CI: 0.52, 0.95; P = 0.02) than did normal-weight or underweight subjects. Conclusion: Consumption of a diet rich in vegetables, fruit, fish, poultry, and whole grains and being overweight before diagnosis with head and neck cancer are associated with a better prognosis. PMID:23269814
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Pretreatment dietary patterns, weight status, and head and neck squamous cell carcinoma prognosis.
Arthur, Anna E; Peterson, Karen E; Rozek, Laura S; Taylor, Jeremy M G; Light, Emily; Chepeha, Douglas B; Hébert, James R; Terrell, Jeffrey E; Wolf, Gregory T; Duffy, Sonia A
2013-02-01
Few studies have evaluated the association of diet and weight status with head and neck cancer outcomes. The purpose of this study was to determine whether pretreatment dietary patterns and weight status are associated with head and neck cancer prognosis. This was a longitudinal study of 542 patients with newly diagnosed head and neck cancer who completed food-frequency questionnaires and health surveys before treatment. Clinical data were abstracted from medical records and the Social Security Death Index. Dietary patterns were identified by using principal component analysis. Cox proportional hazard models were used to examine the association of derived dietary patterns (fit by quintiles of exposure) and weight status with time to recurrence and survival, with control for covariates. During the study period, there were 229 deaths and 184 recurrences. Two dietary patterns were identified: a whole-foods pattern (characterized by high intakes of vegetables, fruit, fish, poultry, and whole grains) and a Western pattern (characterized by high intakes of red and processed meats, refined grains, potatoes, and French fries). In multivariable analyses, significantly fewer deaths were observed in subjects most adherent to the whole-foods pattern (HR: 0.56; 95% CI: 0.34, 0.92; P-trend = 0.01). Subjects classified as overweight or obese had significantly fewer deaths (HR: 0.65; 95% CI: 0.49, 0.85; P = 0.001) and recurrences (HR: 0.70; 95% CI: 0.52, 0.95; P = 0.02) than did normal-weight or underweight subjects. Consumption of a diet rich in vegetables, fruit, fish, poultry, and whole grains and being overweight before diagnosis with head and neck cancer are associated with a better prognosis.
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Rahmawaty, Setyaningrum; Lyons-Wall, Philippa; Batterham, Marijka; Charlton, Karen; Meyer, Barbara J
2014-02-01
The aim of this study was to examine food patterns of Australian children ages 9 to 13 y in relation to ω-3 long-chain polyunsaturated fatty acid (ω-3 LCPUFA) intake. Secondary analysis was conducted on nationally representative food data of 1110 Australian children ages 9 to 13 y (525 boys and 585 girls) that was obtained using two 24-h recalls. Principle component factor analysis was used to identify food patterns. Discriminant function analysis was used to identify the relationship between the food patterns and total ω-3 LCPUFA intake. Four major food patterns emerged for each sex. For boys these were labeled: "snack foods," "soft drinks," "vegetables," and "pork and meat chops, steak, and mince." For girls they were labeled: "vegetables," "take-away," "tea, coffee, iced coffee drinks" and "canned meals and soup." Fish consumption bought from take-away outlets was more frequently consumed in the "soft drink" (r = 0.577) and take-away (r = 0.485) food pattern in boys and girls, respectively. In contrast, fish prepared at home was more often consumed in "vegetables" in both boys (r = 0.018) and girls (r = 0.106), as well as in the "pork and meat chops, steak and mince" food pattern in boys (r = 0.060). There was a trend that in boys, the "vegetables" group discriminated children who consumed ω-3 LCPUFA levels similar to adequate intakes (AI) (P = 0.067), whereas in girls, the take-away food pattern discriminated for being a fish consumer (P = 0.060). Dietary patterns associated with a high consumption of vegetables and "take-aways" food that include meat and fish are likely to positively influence dietary ω-3 LCPUFA intake in Australian children. Copyright © 2014 Elsevier Inc. All rights reserved.
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Martinuzzi, Sebastián; Ramos-González, Olga M; Muñoz-Erickson, Tischa A; Locke, Dexter H; Lugo, Ariel E; Radeloff, Volker C
2018-04-01
Fine-scale information about urban vegetation and social-ecological relationships is crucial to inform both urban planning and ecological research, and high spatial resolution imagery is a valuable tool for assessing urban areas. However, urban ecology and remote sensing have largely focused on cities in temperate zones. Our goal was to characterize urban vegetation cover with sub-meter (<1 m) resolution aerial imagery, and identify social-ecological relationships of urban vegetation patterns in a tropical city, the San Juan Metropolitan Area, Puerto Rico. Our specific objectives were to (1) map vegetation cover using sub-meter spatial resolution (0.3-m) imagery, (2) quantify the amount of residential and non-residential vegetation, and (3) investigate the relationship between patterns of urban vegetation vs. socioeconomic and environmental factors. We found that 61% of the San Juan Metropolitan Area was green and that our combination of high spatial resolution imagery and object-based classification was highly successful for extracting vegetation cover in a moist tropical city (97% accuracy). In addition, simple spatial pattern analysis allowed us to separate residential from non-residential vegetation with 76% accuracy, and patterns of residential and non-residential vegetation varied greatly across the city. Both socioeconomic (e.g., population density, building age, detached homes) and environmental variables (e.g., topography) were important in explaining variations in vegetation cover in our spatial regression models. However, important socioeconomic drivers found in cities in temperate zones, such as income and home value, were not important in San Juan. Climatic and cultural differences between tropical and temperate cities may result in different social-ecological relationships. Our study provides novel information for local land use planners, highlights the value of high spatial resolution remote sensing data to advance ecological research and urban planning in tropical cities, and emphasizes the need for more studies in tropical cities. © 2017 by the Ecological Society of America.
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Chemical and Stress Resistances of Clostridium difficile Spores and Vegetative Cells
Edwards, Adrianne N.; Karim, Samiha T.; Pascual, Ricardo A.; Jowhar, Lina M.; Anderson, Sarah E.; McBride, Shonna M.
2016-01-01
Clostridium difficile is a Gram-positive, sporogenic and anaerobic bacterium that causes a potentially fatal colitis. C. difficile enters the body as dormant spores that germinate in the colon to form vegetative cells that secrete toxins and cause the symptoms of infection. During transit through the intestine, some vegetative cells transform into spores, which are more resistant to killing by environmental insults than the vegetative cells. Understanding the inherent resistance properties of the vegetative and spore forms of C. difficile is imperative for the development of methods to target and destroy the bacterium. The objective of this study was to define the chemical and environmental resistance properties of C. difficile vegetative cells and spores. We examined vegetative cell and spore tolerances of three C. difficile strains, including 630Δerm, a 012 ribotype and a derivative of a past epidemic strain; R20291, a 027 ribotype and current epidemic strain; and 5325, a clinical isolate that is a 078 ribotype. All isolates were tested for tolerance to ethanol, oxygen, hydrogen peroxide, butanol, chloroform, heat and sodium hypochlorite (household bleach). Our results indicate that 630Δerm vegetative cells (630 spo0A) are more resistant to oxidative stress than those of R20291 (R20291 spo0A) and 5325 (5325 spo0A). In addition, 5325 spo0A vegetative cells exhibited greater resistance to organic solvents. In contrast, 630Δerm spores were more sensitive than R20291 or 5325 spores to butanol. Spores from all three strains exhibited high levels of resistance to ethanol, hydrogen peroxide, chloroform and heat, although R20291 spores were more resistant to temperatures in the range of 60–75°C. Finally, household bleach served as the only chemical reagent tested that consistently reduced C. difficile vegetative cells and spores of all tested strains. These findings establish conditions that result in vegetative cell and spore elimination and illustrate the resistance of C. difficile to common decontamination methods. These results further demonstrate that the vegetative cells and spores of various C. difficile strains have different resistance properties that may impact decontamination of surfaces and hands. PMID:27833595
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Assessing the drivers shaping global patterns of urban vegetation landscape structure.
Dobbs, C; Nitschke, C; Kendal, D
2017-08-15
Vegetation is one of the main resources involve in ecosystem functioning and providing ecosystem services in urban areas. Little is known on the landscape structure patterns of vegetation existing in urban areas at the global scale and the drivers of these patterns. We studied the landscape structure of one hundred cities around the globe, and their relation to demography (population), socioeconomic factors (GDP, Gini Index), climate factors (temperature and rain) and topographic characteristics (altitude, variation in altitude). The data revealed that the best descriptors of landscape structure were amount, fragmentation and spatial distribution of vegetation. Populated cities tend to have less, more fragmented, less connected vegetation with a centre of the city with low vegetation cover. Results also provided insights on the influence of socioeconomics at a global scale, as landscape structure was more fragmented in areas that are economically unequal and coming from emergent economies. This study shows the effects of the social system and climate on urban landscape patterns that gives useful insights for the distribution in the provision of ecosystem services in urban areas and therefore the maintenance of human well-being. This information can support local and global policy and planning which is committing our cities to provide accessible and inclusive green space for all urban inhabitants. Copyright © 2017 Elsevier B.V. All rights reserved.
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Larsen, Laurel G.; Harvey, Judson W.
2010-01-01
Mechanisms reported to promote landscape self‐organization cannot explain vegetation patterning oriented parallel to flow. Recent catastrophic shifts in Everglades landscape pattern and ecological function highlight the need to understand the feedbacks governing these ecosystems. We modeled feedback between vegetation, hydrology, and sediment transport on the basis of a decade of experimentation. Results from more than 100 simulations showed that flows just sufficient to redistribute sediment from sparsely vegetated sloughs to dense ridges were needed for an equilibrium patterned landscape oriented parallel to flow. Surprisingly, although vegetation heterogeneity typically conveys resilience, in wetlands governed by flow/sediment feedbacks it indicates metastability, whereby the landscape is prone to catastrophic shifts. Substantial increases or decreases in flow relative to the equilibrium condition caused an expansion of emergent vegetation and loss of open‐water areas that was unlikely to revert upon restoration of the equilibrium hydrology. Understanding these feedbacks is critical in forecasting wetland responses to changing conditions and designing management strategies that optimize ecosystem services, such as carbon sequestration or habitat provision. Our model and new sensitivity analysis techniques address these issues and make it newly apparent that simply returning flow to predrainage conditions in the Everglades may not be sufficient to restore historic landscape patterns and processes.
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NASA Astrophysics Data System (ADS)
Hawtree, Daniel; San Miguel, Jesus; Sedano, Fernando; Kempeneers, Pieter
2010-05-01
The Mediterranean basin region is highly susceptible to wildfire, with approximately 60,000 individual fires and half a million ha of natural vegetation burnt per year. Of particular concern in this region is the impact of repeated wildfires on the ability of natural lands to return to a pre-fire state, and of the possibility of desertification of semi-arid areas. Given these concerns, understanding the temporal patterns of vegetation recovery is important for the management of environmental resources in the region. A valuable tool for evaluating these recovery patterns are vegetation indices derived from remote sensing data. Previous research on post-fire vegetation recovery conducted in this region has found significant variability in recovery times across different study sites. It is unclear what the primary variables are affecting the differences in the rates of recovery, and if any geographic patterns of behavior exist across the Mediterranean basin. This research has primarily been conducted using indices derived from Landsat imagery. However, no extensive analysis of vegetation regeneration for large regions has been published, and assessment of vegetation recovery on the basis of medium-spatial resolution imagery such as that of MODIS has not yet been analyzed. This study examines the temporal pattern of vegetation recovery in a number of fire sites in the Mediterranean basin, using data derived from MODIS 16 -day composite vegetation indices. The intent is to develop a more complete picture of the temporal sequence of vegetation recovery, and to evaluate what additional factors impact variations in the recovery sequence. In addition, this study evaluates the utility of using MODIS derived vegetation indices for regeneration studies, and compares the findings to earlier studies which rely on Landsat data. Wildfires occurring between the years 2000 and 2004 were considered as potential study sites for this research. Using the EFFIS dataset, all wildfires covering an area of at least 1,000 ha were identified. The land-cover / land-use of these large fires sites were then evaluated using the CORINE land-cover data set, and the sites dominated primarily by natural vegetation were identified. Once these candidate sites were identified, a subset was selected across a range of locations and site characteristics for post-fire recovery analysis. To evaluate the post-fire recovery sequence in these locations, time-series of NDVI, EVI, and LAI were derived using 250 meter resolution MODIS data (MOD13Q). The vegetation index values were then compared to pre-fire values to determine recovery relative to the pre-fire vegetative state. The variability in rates of recovery are then considered with respect to moisture availability, vegetation type, and local site conditions to evaluate if any patterns of recovery can be determined.
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Expression patterns of wnt8 orthologs in two sand dollar species with different developmental modes.
Nakata, Hidewo; Minokawa, Takuya
2009-03-01
Two wnt8 orthologs, Smwnt8 and Pjwnt8, were isolated from an indirect developing sand dollar, Scaphechinus mirabilis, and a direct developing sand dollar, Peronella japonica, respectively. The expression patterns of two genes during early development were examined by whole mount in situ hybridization. The expression of Smwnt8 was initiated in the micromeres at the late 16-cell stage and expanded at the 64-cell stage to the whole vegetal hemisphere, including the presumptive endomesodermal regions. The timing of the initiation of Pjwnt8 transcription in the presumptive endomesoderm region was delayed by 2-3 cell cycles compared to that of Smwnt8. The delay, or molecular heterochrony, of Pjwnt8 transcription strongly suggests the existence of a substantial evolutionary change in the early endomesodermal specification of P. japonica. In addition to the endomesodermal expression during early embryogenesis, bilateral expressions were observed commonly in the ectoderm of two sand dollar species during larval stages.
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From Patterns to Function in Living Systems: Dryland Ecosystems as a Case Study
NASA Astrophysics Data System (ADS)
Meron, Ehud
2018-03-01
Spatial patterns are ubiquitous in animate matter. Besides their intricate structure and beauty they generally play functional roles. The capacity of living systems to remain functional in changing environments is a question of utmost importance, but its intimate relationship to pattern formation is largely unexplored. Here, we address this relationship using dryland vegetation as a case study. Following a brief introduction to pattern-formation theory, we describe a mathematical model that captures several mechanisms of vegetation pattern formation and discuss ecological contexts that showcase different mechanisms. Using this model, we unravel the different vegetation patterns that keep dryland ecosystems viable along the rainfall gradient, identify multistability ranges where fronts separating domains of alternative stable states exist, and highlight the roles of front dynamics in mitigating or reversing desertification. The utility of satellite images in testing model predictions is discussed. An outlook on outstanding open problems concludes this paper.
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Elevation Control on Vegetation Organization in a Semiarid Ecosystem in Central New Mexico
NASA Astrophysics Data System (ADS)
Nudurupati, S. S.; Istanbulluoglu, E.; Adams, J. M.; Hobley, D. E. J.; Gasparini, N. M.; Tucker, G. E.; Hutton, E. W. H.
2015-12-01
Many semiarid and desert ecosystems are characterized by patchy and dynamic vegetation. Topography plays a commanding role on vegetation patterns. It is observed that plant biomes and biodiversity vary systematically with slope and aspect, from shrublands in low desert elevations, to mixed grass/shrublands in mid elevations, and forests at high elevations. In this study, we investigate the role of elevation dependent climatology on vegetation organization in a semiarid New Mexico catchment where elevation and hillslope aspect play a defining role on plant types. An ecohydrologic cellular automaton model developed within Landlab (component based modeling framework) is used. The model couples local vegetation dynamics (that simulate biomass production based on local soil moisture and potential evapotranspiration) and plant establishment and mortality based on competition for resources and space. This model is driven by elevation dependent rainfall pulses and solar radiation. The domain is initialized with randomly assigned plant types and the model parameters that couple plant response with soil moisture are systematically changed. Climate perturbation experiments are conducted to examine spatial vegetation organization and associated timescales. Model results reproduce elevation and aspect controls on observed vegetation patterns indicating that this model captures necessary and sufficient conditions that explain these observed ecohydrological patterns.
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On modeling the organization of landscapes and vegetation patterns controlled by solar radiation
NASA Astrophysics Data System (ADS)
Istanbulluoglu, E.; Yetemen, O.
2014-12-01
Solar radiation is a critical driver of ecohydrologic processes and vegetation dynamics. Patterns of runoff generation and vegetation dictate landscape geomorphic response. Distinct patterns in the organization of soil moisture, vegetation type, and landscape morphology have been documented in close relation to aspect in a range of climates. Within catchments, from north to south facing slopes, studies have shown ecotone shifts from forest to shrub species, and steep diffusion-dominated landforms to fluvial landforms. Over the long term differential evolution of ecohydrology and geomorphology leads to observed asymmetric structure in the planform of channel network and valley morphology. In this talk we present examples of coupled modeling of ecohydrology and geomorphology driven by solar radiation. In a cellular automata model of vegetation dynamics we will first show how plants organize in north and south facing slopes and how biodiversity changes with elevation. When vegetation-erosion feedbacks are coupled emergent properties of the coupled system are observed in the modeled elevation and vegetation fields. Integrating processes at a range of temporal and spatial scales, coupled models of ecohydrologic and geomorphic dynamics enable examination of global change impacts on landscapes and ecosystems.
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Chou, Wen-Chieh; Lin, Wen-Tzu; Lin, Chao-Yuan
2009-05-01
The catastrophic earthquake, 7.3 on the Richter scale, occurred on September 21, 1999 in Central Taiwan. Much of standing vegetation on slopes was eliminated and massive, scattered landslides were induced at the Jou-Jou Mountain area of the Wu-Chi basin in Nantou County. We evaluated three methods for assessing landslide hazard and vegetation recovery conditions. (1) Self-organizing map (SOM) neural network coupled with fuzzy technique was used to quickly extract the landslide. (2) The NDVI-based vegetation recovery index derived from multi-temporal SPOT satellite images was used to evaluate vegetation recovery rate in the denudation sites. (3) The spatial distribution index (SDI) based on land-cover topographic location was employed to analyze vegetation recovery patterns, including the invading, surviving and mixed patterns at the Jou-Jou Mountain area. On September 27, 1999, there were 849.20 ha of landslide area extracted using the self-organizing map and fuzzy technique combined model. After six years of natural vegetation succession, the landslide has gradually restored, and vegetation recovery rate reached up to 86%. On-site observation shows that many native pioneer plants have invaded onto the denudation sites even if disturbed by several typhoons. Two native surviving plants, Arundo formosana Hack and Pinus taiwanensis Hayata, play a vital role in natural vegetation succession in this area, especially for the sites on ridgeline and steep slopes.
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The Echinoid Mitotic Gradient: Effect of Cell Size on the Micromere Cleavage Cycle
Langelan Duncan, Rosalie E.; Whiteley, Arthur H.
2012-01-01
SUMMARY Like other euechinoids, the fertilized eggs of the sand dollar Dendraster excentricus proceed through cleavages that produce a pattern of macromeres, mesomeres, and micromeres at the 4th division. The 8 cells of the macro-mesomere lineage proceed through 6 additional cleavages before hatching. At the fifth overall division, the 4 micromeres produce a lineage of large micromeres that will divide 3 additional times, and a lineage of small micromeres that will divide once more before hatching. Irrespective of lineage, the length of the cell cycles is closely related to the size of the blastomere; cells of the same size have the same cell cycle time. A consequence is that at the fourth cleavage, there is a gradient of mitotic activity from the fastest dividers at the animal pole and the slowest cleacing micromeres at the vegetal pole. By the time of hatching, which is the 10th division of meso-macromeres, all cells are the same small size, the metachronic pattern of division gives way to asynchrony, and the mitotic gradient along the polar axis is lost. Experimental pre-exposure to sodium dodecyl sulfate (SDS), however, blocks the appearance of the gradients in cell size, the mitotic gradient, and the differential in cell cycle times. It is proposed that the mitotic gradients, cell cycle times, and attainment of a state of asynchrony are functions of cell size. Developmental consequences of the transition are large, and include coordinated activation of transcriptions, synthesis of new patterns of proteins, alterations of metabolism, and onset of morphogenesis. PMID:22006441
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Amemiya, S; Arakawa, E
1996-09-01
Peronella japonica, a sand dollar, forms an abbreviated pluteus larva and metamorphoses within 3 days without feeding. In the present study, the cleavage pattern of Peronella embryos was found to be quite irregular in the vegetal blastomeres at the fourth cleavage. Less than half of the embryos examined formed four typical micromeres. The majority formed zero, one, two or three typical micromeres of regular size, and the blastomere(s) remaining in the vegetal-most region was atypical in size and/or its direction of division. Most embryos were able to form pluteus larvae and a considerable proportion of these metamorphosed into juvenile sea urchins, regardless of whether or not they had formed four typical micromeres of regular size, although embryos which formed no typical micromeres developed into pluteus larvae less frequently. The micromere progeny in Peronella embryos form skeletogenic mesenchyme cells. The average numbers of skeletogenic mesenchyme cells in the three sand dollar species, Clypeaster japonicus, Astriclypeus manni and P. japonica were 62, 122 and 219, respectively. In these species, the skeletogenic mesenchyme cell-specific glycoprotein (msp130) was first detected immediately after ingression of the primary mesenchyme cells, spicules appeared at the early gastrula stage and triradiate spicules were found in late gastrulae. Appearance of these characteristics was markedly accelerated in the embryos of A. manni and P. japonica in comparison with those of C. japonicus. Each step in the formation of larval spicules was equally accelerated in A. manni and P. japonica, although the appearance of the adult skeleton was further accelerated in P. japonica in comparison with A. manni, possibly because of omission of the four- to eight-armed pluteus stages.
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Global sea surface temperature (SST) anomalies have a demonstrable effect on vegetation dynamics and precipitation patterns throughout the continental U.S. SST variations have been correlated with greenness (vegetation densities) and precipitation via ocean-atmospheric interactio...
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Chaves-Silva, Samuel; Santos, Adolfo Luís Dos; Chalfun-Júnior, Antonio; Zhao, Jian; Peres, Lázaro E P; Benedito, Vagner Augusto
2018-05-24
Anthocyanins are naturally occurring flavonoids derived from the phenylpropanoid pathway. There is increasing evidence of the preventative and protective roles of anthocyanins against a broad range of pathologies, including different cancer types and metabolic diseases. However, most of the fresh produce available to consumers typically contains only small amounts of anthocyanins, mostly limited to the epidermis of plant organs. Therefore, transgenic and non-transgenic approaches have been proposed to enhance the levels of this phytonutrient in vegetables, fruits, and cereals. Here, were review the current literature on the anthocyanin biosynthesis pathway in model and crop species, including the structural and regulatory genes involved in the differential pigmentation patterns of plant structures. Furthermore, we explore the genetic regulation of anthocyanin biosynthesis and the reasons why it is strongly repressed in specific cell types, in order to create more efficient breeding strategies to boost the biosynthesis and accumulation of anthocyanins in fresh fruits and vegetables. Copyright © 2018. Published by Elsevier Ltd.
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NASA Astrophysics Data System (ADS)
Székely, Balázs; Telbisz, Tamás; Koma, Zsófia; Kelemen, Kristóf; Szmorad, Ferenc; Deák, Márton; Látos, Tamás; Standovár, Tibor
2015-04-01
Topography and lithology are two major factors influencing the vegetation cover, its mosaic pattern and lateral transitions. In karstic areas the topography has a high diversity, microtopographic landforms influence the local ecological setting, vegetation structure. Presence of sinkholes of various sizes and geometric arrangements causes rapid lateral variation of the slope, aspect patterns as well as highly modify the soil water balance in time and space. These diversity of factors defines a mosaicked habitat pattern for vegetation assemblages. The World Heritage Site Aggtelek Karst/Slovakian Karst Caves has characteristic natural and environmental properties concerning the geomorphological as well as the ecological values. In order to be able to study the topographic influence on the ecological setting, a high-resolution digital terrain model (DTM) and digital surface model (DSM) have been derived from airborne laser scanning data depicting the karstic micro- and macrotopographic Landscape elements and the envelope surface of the canopy. Additional vegetation parameters like closure and average height have been derived from a normalized digital surface model (nDSM). Extensive mapping of vegetation properties has been carried out: centered on points of a grid array several vegetation-specific data - including composition and structure of tree and shrub layers, herbacesous vegetation and tree regeneration - have been acquired. Various classification patterns - based on trees pecies composition, vertical vegetation structure - have been derived from this data set. The comparison of the vegetation classification data and the geomorphometric DTM derivatives yielded interesting results. Certain vegetation characteristics often correlate with the geomorphometric properties. We interpret this similarity as sensitivity of vegetion to fine-scale variations in geomorphic properties like aspect, illumination conditions and soil properties. However, in many cases the vegetation pattern shows no correlation with natural settings. It may be the result of human impact, which actively formed the local land use in these hilly-low mountain karst area since the Middle Ages. These studies have been financed partly by the following projects: data acquisition: "Hungarian-Slovakian Transnational Cooperation Programme 2007-2013", "Management of World Heritage Aggtelek Karst/Slovakian Karst Caves" (HUSK/1101/221/0180, Aggtelek NP), data evaluation: 'Multipurpose assessment serving forest biodiversity conservation in the Carpathian region of Hungary', Swiss-Hungarian Cooperation Programme (SH/4/13 Project), and Hungarian National Research Fund OTKA NK83400 and OTKA 104811. BS contributed as an Alexander von Humboldt Research Fellow, TT was supported by the János Bolyai Scolarship of the Hungarian Academy of Sciences.
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Animal and vegetation patterns in natural and man-made bog pools: implications for restoration
Mazerolle, M.J.; Poulin, M.; Lavoie, C.; Rochefort, L.; Desrochers, A.; Drolet, B.
2006-01-01
1. Peatlands have suffered great losses following drainage for agriculture, forestry, urbanisation, or peat mining, near inhabited areas. We evaluated the faunal and vegetation patterns after restoration of a peatland formerly mined for peat. We assessed whether bog pools created during restoration are similar to natural bog pools in terms of water chemistry, vegetation structure and composition, as well as amphibian and arthropod occurrence patterns. 2. Both avian species richness and peatland vegetation cover at the site increased following restoration. Within bog pools, however, the vegetation composition differed between natural and man-made pools. The cover of low shrubs, Sphagnum moss, submerged, emergent and floating vegetation in man-made pools was lower than in natural pools, whereas pH was higher than in typical bog pools. Dominant plant species also differed between man-made and natural pools. 3. Amphibian tadpoles, juveniles and adults occurred more often in man-made pools than natural bog pools. Although some arthropods, including Coleoptera bog specialists, readily colonised the pools, their abundance was two to 26 times lower than in natural bog pools. Plant introduction in bog pools, at the stocking densities we applied, had no effect on the occurrence of most groups. 4. We conclude that our restoration efforts were partially successful. Peatland-wide vegetation patterns following restoration mimicked those of natural peatlands, but 4 years were not sufficient for man-made pools to fully emulate the characteristics of natural bog pools.
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Remote sensing of vegetation pattern and condition to monitor changes in Everglades biogeochemistry
Jones, John W.
2011-01-01
Ground-based studies of biogeochemistry and vegetation patterning yield process understanding, but the amount of information gained by ground-based studies can be greatly enhanced by efficient, synoptic, and temporally resolute monitoring afforded by remote sensing. The variety of presently available Everglades vegetation maps reflects both the wide range of application requirements and the need to balance cost and capability. More effort needs to be applied to documenting and understanding vegetation distribution and condition as indicators of biogeochemistry and contamination. Ground-based and remote sensing studies should be modified to maximize their synergy and utility for adaptive management.
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Improving Long-term Post-wildfire hydrologic simulations using ParFlow
NASA Astrophysics Data System (ADS)
Lopez, S. R.; Kinoshita, A. M.
2015-12-01
Wildfires alter the natural hydrologic processes within a watershed. After vegetation is burned, the combustion of organic material and debris settles into the soil creating a hydrophobic layer beneath the soil surface with varying degree of thickness and depth. Vegetation regrowth rates vary as a function of radiative exposure, burn severity, and precipitation patterns. Hydrologic models used by the Burned Area Emergency Response (BAER) teams use input data and model calibration constraints that are generally either one-dimensional, empirically-based models, or two-dimensional, conceptually-based models with lumped parameter distributions. These models estimate runoff measurements at the watershed outlet; however, do not provide a distributed hydrologic simulation at each point within the watershed. This work uses ParFlow, a three-dimensional, distributed hydrologic model to (1) correlate burn severity with hydrophobicity, (2) evaluate vegetation recovery rate on water components, and (3) improve flood prediction for managers to help with resource allocation and management operations in burned watersheds. ParFlow is applied to Devil Canyon (43 km2) in San Bernardino, California, which was 97% burned in the 2003 Old Fire. The model set-up uses a 30m-cell size resolution over a 6.7 km by 6.4 km lateral extent. The subsurface reaches 30 m and is assigned a variable cell thickness. Variable subsurface thickness allows users to explicitly consider the degree of recovery throughout the stages of regrowth. Burn severity maps from remotely sensed imagery are used to assign initial hydrophobic layer parameters and thickness. Vegetation regrowth is represented with satellite an Enhanced Vegetation Index. Pre and post-fire hydrologic response is evaluated using runoff measurements at the watershed outlet, and using water component (overland flow, lateral flow, baseflow) measurements.
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Spatial patterns in vegetation fires in the Indian region.
Vadrevu, Krishna Prasad; Badarinath, K V S; Anuradha, Eaturu
2008-12-01
In this study, we used fire count datasets derived from Along Track Scanning Radiometer (ATSR) satellite to characterize spatial patterns in fire occurrences across highly diverse geographical, vegetation and topographic gradients in the Indian region. For characterizing the spatial patterns of fire occurrences, observed fire point patterns were tested against the hypothesis of a complete spatial random (CSR) pattern using three different techniques, the quadrat analysis, nearest neighbor analysis and Ripley's K function. Hierarchical nearest neighboring technique was used to depict the 'hotspots' of fire incidents. Of the different states, highest fire counts were recorded in Madhya Pradesh (14.77%) followed by Gujarat (10.86%), Maharastra (9.92%), Mizoram (7.66%), Jharkhand (6.41%), etc. With respect to the vegetation categories, highest number of fires were recorded in agricultural regions (40.26%) followed by tropical moist deciduous vegetation (12.72), dry deciduous vegetation (11.40%), abandoned slash and burn secondary forests (9.04%), tropical montane forests (8.07%) followed by others. Analysis of fire counts based on elevation and slope range suggested that maximum number of fires occurred in low and medium elevation types and in very low to low-slope categories. Results from three different spatial techniques for spatial pattern suggested clustered pattern in fire events compared to CSR. Most importantly, results from Ripley's K statistic suggested that fire events are highly clustered at a lag-distance of 125 miles. Hierarchical nearest neighboring clustering technique identified significant clusters of fire 'hotspots' in different states in northeast and central India. The implications of these results in fire management and mitigation were discussed. Also, this study highlights the potential of spatial point pattern statistics in environmental monitoring and assessment studies with special reference to fire events in the Indian region.
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Zhang, Wei; Xiang, Yong-Bing; Li, Hong-Lan; Yang, Gong; Cai, Hui; Ji, Bu-Tian; Gao, Yu-Tang; Zheng, Wei; Shu, Xiao-Ou
2013-10-01
Although dietary patterns, specific foods, and their constituents have been linked to cancer risk, the role of dietary patterns and specific food groups in liver cancer risk has not been investigated. In the Shanghai Women's Health Study (SWHS) and Shanghai Men's Health Study (SMHS), two cohort studies of 132 837 Chinese women and men, we evaluated the relationship between dietary patterns, food groups, and liver cancer risk. Through in-person interviews, dietary information intake over the preceding year was collected by using a validated food-frequency questionnaire. Cox regression model was used to estimate hazard ratios and 95% confidence intervals with adjustment for potential confounders. During an average follow-up of 10.9 (SWHS) or 5.5 (SMHS) years, 267 incident liver cancer cases were identified after the first 2 years of study enrolment. Three dietary patterns were derived by factor analysis. A vegetable-based dietary pattern was inversely associated with liver cancer; hazard ratios (95% confidence intervals) for the lowest to highest quartiles were: 1.00; 0.98 (0.71-1.35); 0.93 (0.67-1.29); and 0.58 (0.40-0.84); P(trend) = 0.01. The association was stronger among participants with a history of chronic liver disease. Further analyses showed high intakes of celery, mushrooms, allium vegetables, composite vegetables (including asparagus lettuce and garland chrysanthemum), legumes and legume products were associated with reduced liver cancer risk (all P(trend) < 0.05). Fruit- and meat-based dietary patterns were not associated with liver cancer risk. Our study suggests that a vegetable-based dietary pattern is associated with reduced liver cancer risk. © 2013 Japanese Cancer Association.
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On the role of vegetation in the formation of river anabranching patterns
NASA Astrophysics Data System (ADS)
Crouzy, B.; D'Odorico, P.; Wütrich, D.; Perona, P.
2012-04-01
Part of studies on the couplings between the evolution of riparian vegetation and the river morphodynamics, we investigate the effect of spatial interactions between vegetation located at different positions within the channel. This work generalizes the experimental and theoretical results by Perona et al. and by Crouzy and Perona (both Advances in Water Resources, in Press) on colonization of riverbars by seedlings or large woody debris by relaxing the hypothesis made in those two works of the biomass growth and uprooting being independent on the presence of neighboring plants. While the hypothesis of independent vegetation growth and uprooting is justified for sparse vegetation cover or young seedlings, it fails as soon as the canopy significantly disturbs the flow or changes the sediment stability. Then, flow-mediated interactions between riparian vegetation located at different positions within the channel can be observed. Those interactions are either constructive or destructive. For example, a region favorable to the development of biomass appears on the lee side of a vegetated obstacle (with bleed flow) due to increased deposition of seeds and sediment (Schnauder and Moggridge, 2008) while conversely scouring can be increased laterally due to obstacle-induced flow diversion (Roulund et al., 2005; Melville and Sutherland, 1988; Zong and Nepf, 2008). We focus on the role of vegetation in the formation of the regular vegetated ridge patterns found in ephemeral rivers (see for example the work by Tooth and Nanson, 2004 on anabranching patterns) or as a succession of swales and ridges on the inside of meander bends (scroll bars). From the analysis of aerial images, we obtain the characteristic length scale of the patterns. We show how in the limit where the hydrological (interarrival time of floods) and the biological (germination and growth rates) timescales are comparable the combination between both positive and negative feedbacks between vegetation located at different positions can lead to the spatial organization of the vegetation. Classically, the presence of the anabranches has been ascribed to an optimization of the sediment load transport (Huang and Nanson, 2007) or for the scroll bars to channel migration, without explicitly accounting for the role of vegetation.
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Ecosystem properties self-organize in response to a directional fog-vegetation interaction.
Stanton, Daniel E; Armesto, Juan J; Hedin, Lars O
2014-05-01
Feedbacks between vegetation and resource inputs can lead to the local, self-organization of ecosystem properties. In particular, feedbacks in response to directional resources (e.g., coastal fog, slope runoff) can create complex spatial patterns, such as vegetation banding. Although similar feedbacks are thought to be involved in the development of ecosystems, clear empirical examples are rare. We created a simple model of a fog-influenced, temperate rainforest in central Chile, which allows the comparison of natural banding patterns to simulations of various putative mechanisms. We show that only feedbacks between plants and fog were able to replicate the characteristic distributions of vegetation, soil water, and soil nutrients observed in field transects. Other processes, such as rainfall, were unable to match these diagnostic distributions. Furthermore, fog interception by windward trees leads to increased downwind mortality, leading to progressive extinction of the leeward edge. This pattern of ecosystem development and decay through self-organized processes illustrates, on a relatively small spatial and temporal scale, the patterns predicted for ecosystem evolution.
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Dietary Patterns and Body Mass Index in Children with Autism and Typically Developing Children
Evans, E. Whitney; Must, Aviva; Anderson, Sarah E.; Curtin, Carol; Scampini, Renee; Maslin, Melissa; Bandini, Linda
2012-01-01
To determine whether dietary patterns (juice and sweetened non-dairy beverages, fruits, vegetables, fruits & vegetables, snack foods, and kid’s meals) and associations between dietary patterns and body mass index (BMI) differed between 53 children with autism spectrum disorders (ASD) and 58 typically developing children, ages 3 to 11, multivariate regression models including interaction terms were used. Children with ASD were found to consume significantly more daily servings of sweetened beverages (2.6 versus 1.7, p=0.03) and snack foods (4.0 versus 3.0, p=0.01) and significantly fewer daily servings of fruits and vegetables (3.1 versus 4.4, p=0.006) than typically developing children. There was no evidence of statistical interaction between any of the dietary patterns and BMI z-score with autism status. Among all children, fruits and vegetables (p=0.004) and fruits alone (p=0.005) were positively associated with BMI z-score in our multivariate models. Children with ASD consume more energy-dense foods than typically developing children; however, in our sample, only fruits and vegetables were positively associated with BMI z-score. PMID:22936951
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Reflectance spectra of subarctic lichens
NASA Technical Reports Server (NTRS)
Petzold, Donald E.; Goward, Samuel N.
1988-01-01
Lichens constitute a major portion of the ground cover of high latitude environments, but little has been reported concerning their in situ solar spectral reflectance properties. Knowledge of these properties is important for the interpretation of remotely sensed observations from high latitude regions, as well as in studies of high latitude ecology and energy balance climatology. The spectral reflectance of common boreal vascular plants is similar to that of vascular plants of the midlatitudes. The dominant lichens, in contrast, display variable reflectance patterns in visible wavelengths. The relative reflectance peak at 0.55 microns, common to green vegetation, is absent or indistinct in spectra of pervasive boreal forest and tundra lichens, despite the presence of chlorophyll in the inner algal cells. Lichens of the dominant genus, Cladina, display strong absorption of ultraviolet energy and short-wavelength blue light relative to their absorption in other visible wavelengths. Since the Cladinae dominate both the surface vegetation in open woodlands of the boreal forest and the low arctic tundra, their unusual spectral reflectance patterns will enable accurate monitoring of the boreal forest-tundra ecotone and detection of its vigor and movement in the future.
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Takata, Hiromi; Kominami, Tetsuya
2011-06-01
We have found a novel embryonic cell population in the keyhole sand dollar Astriclypeus manni, which we refer to as lucent fluorescent cells (LFCs). Live LFCs are transparent, but emit autofluorescence after formaldehyde fixation. LFCs become noticeable in the vegetal plate of early gastrulae immediately after the appearance of pigment cells. As development progresses, LFCs increase in number and migrate from the vegetal plate toward the animal pole in a manner similar to pigment cells. Notably, LFCs also migrate into the oral ectoderm, while pigment cells do not. In addition, we determined that there were nearly 300 LFCs per embryo, which greatly exceeds the number of pigment cells. Treatment with the Notch signaling inhibitor N-[(3,5-Difluorophenyl)acetyl]-l-alanyl-2-phenyl]glycine-1,1-dimethylethyl ester (DAPT) resulted in a marked decrease in pigment cell number, but only a modest decrease in LFCs. In DAPT-treated embryos, LFCs had a distribution pattern similar to pigment cells and were excluded from the oral ectoderm. Unlike other sea urchins, Nodal signaling was not involved in the specification of pigment cells and LFCs in these embryos. Pulse treatment and measurement of cell diameters revealed that LFCs underwent 13-15 cycles of cell division and were specified during the 11th cleavage, one cell cycle later than observed for pigment cells. At the pluteus stage, a cluster of LFCs was observed in the animal plate in addition to two rows of LFCs running along the ciliary band. In addition, dozens of LFCs aligned at the uppermost level of the stomodaeum. Therefore, though the two cell populations share some features, LFCs are considerably different from pigment cells. © 2011 The Authors. Development, Growth & Differentiation © 2011 Japanese Society of Developmental Biologists.
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Long-term patterns in vegetation-site relationships in a southern Appalachian forest
Katherine J. Elliott; James M. Vose; Wayne T. Swank; Paul V. Bolstad
1999-01-01
The authors used permanent plot inventories from 1969-1973 and 1988-1993 to describe forest species distribution patterns of the Coweeta Hydrologic Laboratory, a 2,185 ha basin in Western North Carolina, USA. They used canonical correspondence analysis to explore the vegetation-site patterns for the 1970âs and 1990âs inventories combined. Site variables were determined...
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Dietary Patterns during Complementary Feeding and Later Outcomes.
Emmett, Pauline M
2016-01-01
Guidelines for healthy infant feeding provide advice on breastfeeding and complementary feeding. The Avon Longitudinal Study of Parents and Children (ALSPAC) derived dietary patterns in comparison to infant feeding guidelines and by using principal components analysis (PCA). The ALSPAC cohort was recruited during pregnancy. Parent-completed questionnaires assessed diet at age 6 and 15 months. Children were weighed and measured at 7 years of age and IQ was assessed at 8 years. A complementary feeding utility index was calculated in relation to 14 feeding recommendations. High scores on the index were due to longer breastfeeding, and feeding more fruit and vegetables and less ready-prepared baby foods. The index scores were positively related to IQ and 'healthy' dietary patterns in childhood. In infancy four dietary patterns were derived from PCA at each age. Three occurred at both ages: 'HM traditional' (home-made meat, vegetables and desserts), 'discretionary' (processed adult foods) and 'RM baby foods' (commercial ready-made baby foods). A 'breastfeeding' pattern was derived at 6 months, with fruit and vegetables included. At 15 months, a 'HM contemporary' pattern included cheese, fish, nuts, legumes, fruit and vegetables. The 'discretionary' and 'RM baby foods' patterns at both ages were negatively associated, while the 'breastfeeding' and 'HM contemporary' patterns were positively associated with IQ. These results suggest that infant diet influences cognitive development in children and may set a trend for later eating patterns. © 2016 Nestec Ltd., Vevey/S. Karger AG, Basel.
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Twenty-year trends in dietary patterns in French-speaking Switzerland: toward healthier eating.
Marques-Vidal, Pedro; Gaspoz, Jean-Michel; Theler, Jean-Marc; Guessous, Idris
2017-07-01
Background: Dietary patterns provide a summary of dietary intake, but to our knowledge, few studies have assessed trends in dietary patterns in the population. Objective: The aim was to assess 20-y trends in dietary patterns in a representative sample of the Geneva, Switzerland, population with the consideration of age, sex, education, and generation. Design: Repeated, independent cross-sectional studies were conducted between 1993 and 2014. Dietary intake was assessed by using a validated food-frequency questionnaire. Dietary patterns were assessed by using principal components analyses. Results: Among 18,763 adults, 1 healthy ("fish and vegetables") and 2 unhealthy ("meat and chips" and "chocolate and sweets") patterns were identified. Scores for the "fish and vegetables" pattern increased, whereas the "meat and chips" and "chocolate and sweets" pattern scores decreased in both sexes and across all age groups. The stronger increase in the "fish and vegetables" pattern score among the less well-educated participants led to a narrowing of educational differences (mean ± SD scores in 1993: -0.56 ± 1.39 compared with -0.05 ± 1.58 in low- compared with highly educated groups, respectively; P < 0.001; scores in 2014: 0.28 ± 1.64 compared with 0.24 ± 1.83, respectively; P = 0.772). Generational analysis showed that older age groups tended to show smaller changes than younger age groups: the yearly score change in "chocolate and sweets" was -0.021 (95% CI: -0.027, -0.014; P < 0.001) for the 35- to 44-y cohort compared with -0.002 (95% CI: -0.009, 0.005; P = 0.546) for the 45- to 54-y cohort. Conclusions: Three dietary patterns were identified; scores for the "fish and vegetables" pattern increased, whereas the "meat and chips" and the "chocolate and sweets" pattern scores decreased. The stronger increases in the "fish and vegetables" pattern score among the less well-educated participants led to a smaller difference in dietary intake across the different educational levels. © 2017 American Society for Nutrition.
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Listeria monocytogenes - Danger for health safety vegetable production.
Kljujev, Igor; Raicevic, Vera; Jovicic-Petrovic, Jelena; Vujovic, Bojana; Mirkovic, Milica; Rothballer, Michael
2018-04-22
The microbiologically contaminated vegetables represent a risk for consumers, especially vegetables without thermal processing. It is known that human pathogen bacteria, such as Listeria monocytogenes, could exist on fresh vegetables. The fresh vegetables could become Listeria-contaminated if they come in touch with contaminated soil, manure, irrigation water. The aim of this work was to investigate the presence of Listeria spp. and L. monocytogenes in different kind of vegetables grown in field and greenhouse condition as well as surface and endophytic colonization plant roots of different vegetables species by L. monocytogenes in laboratory conditions. The detection of Listeria spp. and L. monocytogenes in vegetable samples was done using ISO and PCR methods. The investigation of colonization vegetable roots and detection Listeria-cells inside plant root tissue was done using Fluorescence in situ hybridization (FISH) method in combination with confocal laser scanning microscopy (CLSM). The results showed that 25.58% vegetable samples were positive for Listeria spp. and only one sample (carrot) was positive for L. monocytogenes out of 43 samples in total collected from field and greenhouse. The strain L. monocytogenes EGD-E surface and endophytic colonized carrot root in highest degree while strain L. monocytogenes SV4B was the most represented at leafy vegetable plants, such at lettuce (1.68 × 10 6 cells/mm 3 absolutely dry root) and spinach (1.39 × 10 6 cells/mm 3 absolutely dry root) root surface. The cells of L. monocytogenes SV4B were visible as single cells in interior tissue of plant roots (celery and sweet corn roots) as well as in the interior of the plant root cell at sweet corn root. The cells of L. monocytogenes EGD-E bind to the surface of the plant root and they were less commonly found out on root hair. In the inner layers of the root, those bacterial cells were inhabited intercellular spaces mainly as single cells very close to the larval vessels of root. Our results suggest that L. monocytogenes is very good endophytic colonizer of vegetable plant roots. Copyright © 2018 Elsevier Ltd. All rights reserved.
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Dynamically incorporating late-successional forest in sustainable landscapes
Ann E. Camp; Paul F. Hessburg; Richard L. Everett
1996-01-01
Ecosystems and landscapes change over time as a function of vegetation characteristics and disturbance regimes, including fire. Interactions between disturbance events and forest development (succession) create patterns of vegetation across landscapes. These patterns result from, and change with respect to, species compositions and structures that arise from...
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A STATISTICAL THERMODYNAMIC MODEL OF THE ORGANIZATIONAL ORDER OF VEGETATION. (R827676)
The complex pattern of vegetation is the macroscopic manifestation of biological diversity and the ecological order in space and time. How is this overwhelmingly diverse, yet wonderfully ordered spatial pattern formed, and how does it evolve? To answer these questions, most tr...
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Seasonal Biophysical Dynamics of the Amazon from Space Using MODIS Vegetation Indices
NASA Astrophysics Data System (ADS)
Huete, A. R.; Didan, K.; Ratana, P.; Ferreira, L.
2002-12-01
We utilized the Terra- Moderate Resolution Imaging Spectroradiometer (MODIS) Vegetation Index (VI) products to analyze the seasonal and spatial patterns of photosynthetic vegetation activity over the Amazon Basin and surrounding regions of Brazil. The seasonal patterns of vegetation activity were studied along two, eco-climatic transects extending from (1) the cerrado region (Brasilia National Park) to the seasonal tropical forest (Tapajos National Forest) and (2) the caatinga biome to the seasonal and per-humid tropical forests. In addition to the climatic transects, we also investigated the seasonal dynamics of altered, land conversion areas associated with pastures and clearcutting land use activities. Both the normalized difference vegetation index (NDVI) and the enhanced vegetation index (EVI) at 250-m, 500-m, and 1-km were used to extract seasonal profile curves. The quality assurance (QA) information of the output products was used in noise removal and data filtering prior to the generation of the seasonal profiles. Histogram analyses were also performed at coarse (biome) scale and fine, site intensive (flux towers) scale. The seasonal patterns of the cerrado and caatinga were very pronounced with distinct dry and wet seasonal trends. We observed decreasing dry-wet seasonal patterns in the transitional areas near Araguaia National Park. In contrast, the seasonal behavior of the tropical forests were much harder to assess, but indicated slight seasonal trends that ran counter to rainfall activity. This may be attributed to new leaf growth in the dry season. We further found MODIS VI seasonal patterns to vary significantly in land converted and land degraded areas.
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Dietary patterns and risk of colorectal cancer: a systematic review of cohort studies (2000-2011).
Yusof, Afzaninawati Suria; Isa, Zaleha Md; Shah, Shamsul Azhar
2012-01-01
This systematic review of cohort studies aimed to identify any association between specific dietary patterns and risk of colorectal cancer (CRC). Dietary patterns involve complex interactions of food and nutrients summarizing the total diet or key aspects of the diet for a population under study. This review involves 6 cohort studies of dietary patterns and their association with colorectal cancer. An exploratory or a posteriori approach and a hypothesis-oriented or a priori approach were employed to identify dietary patterns. The dietary pattern identified to be protective against CRC was healthy, prudent, fruits and vegetables, fat reduced/diet foods, vegetables/fish/poultry, fruit/wholegrain/dairy, healthy eating index 2005, alternate healthy eating index, Mediterranean score and recommended food score. An elevated risk of CRC was associated with Western diet, pork processed meat, potatoes, traditional meat eating, and refined grain pattern. The Western dietary pattern which mainly consists of red and processed meat and refined grains is associated with an elevated risk of development of CRC. Protective factors against CRC include a healthy or prudent diet, consisting of vegetables, fruits, fish and poultry.
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Paul F. Hessburg; Bradley G. Smith; Scott D. Kreiter; Craig A. Miller; R. Brion Salter; Cecilia H. McNicoll; Wendel J. Hann
1999-01-01
Management activities of the 20th century, especially fire exclusion, timber harvest, and domestic livestock grazing, have significantly modified vegetation spatial patterns of forests and ranges in the interior Columbia basin. Compositional patterns as well as patterns of living and dead structure have changed. Dramatic change in vital ecosystem processes such as fire...
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Enomoto, Mari; Yoshii, Hidenori; Mita, Tomoya; Sanke, Haruna; Yokota, Ayako; Yamashiro, Keiko; Inagaki, Noriko; Gosho, Masahiko; Ohmura, Chie; Kudo, Kayo; Watada, Hirotaka; Onuma, Tomio
2015-08-01
To analyse the relationships between dietary patterns and cognitive function in elderly patients with type 2 diabetes mellitus (T2DM). Patients with T2DM completed a 3-day dietary record and Mini-mental State Examination (MMSE). Dietary patterns were identified by factor analysis. The study included 73 patients and identified five dietary patterns, one of which was characterized by high loading for vegetables and fish. A higher consumption of vegetables and fish was significantly associated with improved MMSE score (unadjusted model, model adjusted for age and sex, and model adjusted for age, sex, education, diabetic nephropathy and alcohol consumption), and decreased prevalence of suspected mild dementia (unadjusted model, model adjusted for age and sex). A high score in the vegetables and fish dietary pattern was associated with high MMSE score and low prevalence of suspected mild dementia in elderly patients with T2DM. © The Author(s) 2015.
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Bonachela, Juan A; Pringle, Robert M; Sheffer, Efrat; Coverdale, Tyler C; Guyton, Jennifer A; Caylor, Kelly K; Levin, Simon A; Tarnita, Corina E
2015-02-06
Self-organized spatial vegetation patterning is widespread and has been described using models of scale-dependent feedback between plants and water on homogeneous substrates. As rainfall decreases, these models yield a characteristic sequence of patterns with increasingly sparse vegetation, followed by sudden collapse to desert. Thus, the final, spot-like pattern may provide early warning for such catastrophic shifts. In many arid ecosystems, however, termite nests impart substrate heterogeneity by altering soil properties, thereby enhancing plant growth. We show that termite-induced heterogeneity interacts with scale-dependent feedbacks to produce vegetation patterns at different spatial grains. Although the coarse-grained patterning resembles that created by scale-dependent feedback alone, it does not indicate imminent desertification. Rather, mound-field landscapes are more robust to aridity, suggesting that termites may help stabilize ecosystems under global change. Copyright © 2015, American Association for the Advancement of Science.
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Okuwa, Takako; Katayama, Takahiro; Takano, Akinori; Yasukawa, Hiroo
2002-10-01
Genes for the cell-counting factors in Dictyostelium discoideum, countin and countin2, are considered to control the size of the multicellular structure of this organism. A novel gene, countin3, that is homologous to countin and countin2 genes (49 and 39% identity in amino acid sequence, respectively) was identified in the D. discoideum genome. The expression of countin3 was observed in the vegetatively growing cells, decreased in the aggregating stage, increased in the mid-developmental stage and decreased again in subsequent stages. This expression pattern is different from that of countin and countin2. The distinct expression kinetics of three genes suggests that they would have unique roles in size control of D. discoideum.
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Freitas-Vilela, Ana Amélia; Smith, Andrew D A C; Kac, Gilberto; Pearson, Rebecca M; Heron, Jon; Emond, Alan; Hibbeln, Joseph R; Castro, Maria Beatriz Trindade; Emmett, Pauline M
2017-04-01
Little is known about how dietary patterns of mothers and their children track over time. The objectives of this study are to obtain dietary patterns in pregnancy using cluster analysis, to examine women's mean nutrient intakes in each cluster and to compare the dietary patterns of mothers to those of their children. Pregnant women (n = 12 195) from the Avon Longitudinal Study of Parents and Children reported their frequency of consumption of 47 foods and food groups. These data were used to obtain dietary patterns during pregnancy by cluster analysis. The absolute and energy-adjusted nutrient intakes were compared between clusters. Women's dietary patterns were compared with previously derived clusters of their children at 7 years of age. Multinomial logistic regression was performed to evaluate relationships comparing maternal and offspring clusters. Three maternal clusters were identified: 'fruit and vegetables', 'meat and potatoes' and 'white bread and coffee'. After energy adjustment women in the 'fruit and vegetables' cluster had the highest mean nutrient intakes. Mothers in the 'fruit and vegetables' cluster were more likely than mothers in 'meat and potatoes' (adjusted odds ratio [OR]: 2.00; 95% Confidence Interval [CI]: 1.69-2.36) or 'white bread and coffee' (OR: 2.18; 95% CI: 1.87-2.53) clusters to have children in a 'plant-based' cluster. However the majority of children were in clusters unrelated to their mother dietary pattern. Three distinct dietary patterns were obtained in pregnancy; the 'fruit and vegetables' pattern being the most nutrient dense. Mothers' dietary patterns were associated with but did not dominate offspring dietary patterns. © 2016 The Authors. Maternal & Child Nutrition published by John Wiley & Sons Ltd.
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Discovery of fairy circles in Australia supports self-organization theory
Getzin, Stephan; Yizhaq, Hezi; Bell, Bronwyn; Erickson, Todd E.; Postle, Anthony C.; Katra, Itzhak; Tzuk, Omer; Zelnik, Yuval R.; Wiegand, Kerstin; Wiegand, Thorsten; Meron, Ehud
2016-01-01
Vegetation gap patterns in arid grasslands, such as the “fairy circles” of Namibia, are one of nature’s greatest mysteries and subject to a lively debate on their origin. They are characterized by small-scale hexagonal ordering of circular bare-soil gaps that persists uniformly in the landscape scale to form a homogeneous distribution. Pattern-formation theory predicts that such highly ordered gap patterns should be found also in other water-limited systems across the globe, even if the mechanisms of their formation are different. Here we report that so far unknown fairy circles with the same spatial structure exist 10,000 km away from Namibia in the remote outback of Australia. Combining fieldwork, remote sensing, spatial pattern analysis, and process-based mathematical modeling, we demonstrate that these patterns emerge by self-organization, with no correlation with termite activity; the driving mechanism is a positive biomass–water feedback associated with water runoff and biomass-dependent infiltration rates. The remarkable match between the patterns of Australian and Namibian fairy circles and model results indicate that both patterns emerge from a nonuniform stationary instability, supporting a central universality principle of pattern-formation theory. Applied to the context of dryland vegetation, this principle predicts that different systems that go through the same instability type will show similar vegetation patterns even if the feedback mechanisms and resulting soil–water distributions are different, as we indeed found by comparing the Australian and the Namibian fairy-circle ecosystems. These results suggest that biomass–water feedbacks and resultant vegetation gap patterns are likely more common in remote drylands than is currently known. PMID:26976567
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Stocking rate effects on spatial heterogeneity in vegetation cover in a grazing-resistant grassland
USDA-ARS?s Scientific Manuscript database
Spatial patterns in rangeland vegetation serve as indicators of rangeland condition and are an important component of wildlife habitat. We illustrate the use of very-large-scale aerial photography (VLSA) to quantify spatial patterns in bare soil of the northeastern Colorado shortgrass steppe. Using ...
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Ostoja, Steven M.; Brooks, Matthew L.; Dudley, Tom; Lee, Steven R.
2014-01-01
and species diversity were very low, suggesting that targets of restoring vegetation to pre-invasion conditions were not met. Longer evaluation periods are needed to adequately evaluate how short-term post-treatment patterns translate to long-term patterns of plant community dynamics.
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Patterns in Vegetable Consumption: Implications for Tailored School Meal Interventions
ERIC Educational Resources Information Center
Orlowski, Marietta; Lee, Miryoung; Spears, William; Narayan, Roopsi; Pobocik, Rebecca S.; Kennel, Julie; Krafka, Erin; Patton, Susan
2017-01-01
Background: Vegetable consumption is a challenging behavioral target; consumption rates are below recommended levels and when interventions produce improvements, increases in vegetable consumption are typically a fraction of the change in fruit consumption. We describe vegetable consumption within Ohio school meals and examine how fruit selection,…
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Can we grow organic or conventional vegetables sustainably without cover crops?
USDA-ARS?s Scientific Manuscript database
Vegetable and fruit consumption patterns in the United States show that most people need to eat far more fruits and vegetables to meet the current nutritional guidelines for a healthy diet. Following these guidelines would require more than doubling the harvested acreage for fruits and vegetables a...
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Remote sensing of vegetation pattern and condition to monitor changes in everglades biogeochemistry
Jones, J.W.
2011-01-01
Ground-based studies of biogeochemistry and vegetation patterning yield process understanding, but the amount of information gained by ground-based studies can be greatly enhanced by efficient, synoptic, and temporally resolute monitoring afforded by remote sensing. The variety of presently available Everglades vegetation maps reflects both the wide range of application requirements and the need to balance cost and capability. More effort needs to be applied to documenting and understanding vegetation distribution and condition as indicators of biogeochemistry and contamination. Ground-based and remote sensing studies should be modified to maximize their synergy and utility for adaptive management. Copyright ?? 2011 Taylor & Francis Group, LLC.
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Sun, Caili; Chai, Zongzheng; Liu, Guobin; Xue, Sha
2017-01-01
Analyzing the dynamic patterns of species diversity and spatial heterogeneity of vegetation in grasslands during secondary succession could help with the maintenance and management of these ecosystems. Here, we evaluated the influence of secondary succession on grassland plant diversity and spatial heterogeneity of abandoned croplands on the Loess Plateau (China) during four phases of recovery: 1-5, 5-10, 10-20, and 20-30 years. The species composition and dominance of the grassland vegetation changed markedly during secondary succession and formed a clear successional series, with the species assemblage dominated by Artemisia capillaris → Heteropappus altaicus→ A. sacrorum . The diversity pattern was one of low-high-low, with diversity peaking in the 10-20 year phase, thus corresponding to a hump-backed model in which maximum diversity occurring at the intermediate stages. A spatially aggregated pattern prevailed throughout the entire period of grassland recovery; this was likely linked to the dispersal properties of herbaceous plants and to high habitat heterogeneity. We conclude that natural succession was conducive to the successful recovery of native vegetation. From a management perspective, native pioneer tree species should be introduced about 20 years after abandoning croplands to accelerate the natural succession of grassland vegetation.
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Sun, Caili; Chai, Zongzheng; Liu, Guobin; Xue, Sha
2017-01-01
Analyzing the dynamic patterns of species diversity and spatial heterogeneity of vegetation in grasslands during secondary succession could help with the maintenance and management of these ecosystems. Here, we evaluated the influence of secondary succession on grassland plant diversity and spatial heterogeneity of abandoned croplands on the Loess Plateau (China) during four phases of recovery: 1–5, 5–10, 10–20, and 20–30 years. The species composition and dominance of the grassland vegetation changed markedly during secondary succession and formed a clear successional series, with the species assemblage dominated by Artemisia capillaris→ Heteropappus altaicus→ A. sacrorum. The diversity pattern was one of low–high–low, with diversity peaking in the 10–20 year phase, thus corresponding to a hump-backed model in which maximum diversity occurring at the intermediate stages. A spatially aggregated pattern prevailed throughout the entire period of grassland recovery; this was likely linked to the dispersal properties of herbaceous plants and to high habitat heterogeneity. We conclude that natural succession was conducive to the successful recovery of native vegetation. From a management perspective, native pioneer tree species should be introduced about 20 years after abandoning croplands to accelerate the natural succession of grassland vegetation. PMID:28900433
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Spatial patterns of large natural fires in Sierra Nevada wilderness areas
Collins, B.M.; Kelly, M.; van Wagtendonk, J.W.; Stephens, S.L.
2007-01-01
The effects of fire on vegetation vary based on the properties and amount of existing biomass (or fuel) in a forest stand, weather conditions, and topography. Identifying controls over the spatial patterning of fire-induced vegetation change, or fire severity, is critical in understanding fire as a landscape scale process. We use gridded estimates of fire severity, derived from Landsat ETM+ imagery, to identify the biotic and abiotic factors contributing to the observed spatial patterns of fire severity in two large natural fires. Regression tree analysis indicates the importance of weather, topography, and vegetation variables in explaining fire severity patterns between the two fires. Relative humidity explained the highest proportion of total sum of squares throughout the Hoover fire (Yosemite National Park, 2001). The lowest fire severity corresponded with increased relative humidity. For the Williams fire (Sequoia/Kings Canyon National Parks, 2003) dominant vegetation type explains the highest proportion of sum of squares. Dominant vegetation was also important in determining fire severity throughout the Hoover fire. In both fires, forest stands that were dominated by lodgepole pine (Pinus contorta) burned at highest severity, while red fir (Abies magnifica) stands corresponded with the lowest fire severities. There was evidence in both fires that lower wind speed corresponded with higher fire severity, although the highest fire severity in the Williams fire occurred during increased wind speed. Additionally, in the vegetation types that were associated with lower severity, burn severity was lowest when the time since last fire was fewer than 11 and 17 years for the Williams and Hoover fires, respectively. Based on the factors and patterns identified, managers can anticipate the effects of management ignited and naturally ignited fires at the forest stand and the landscape levels. ?? 2007 Springer Science+Business Media, Inc.
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NASA Astrophysics Data System (ADS)
Yang, Lei; Chen, Liding; Wei, Wei
2017-04-01
Soil water stored below rainfall infiltration depth is a reliable water resource for plant growth in arid and semi-arid regions. For decreasing serious soil erosion, large-scale human-introduced vegetation restoration was initiated in Chinese Loess Plateau in late 1990s. However, these activities may result in excessive water consumption and soil water deficit if no appropriate scientific guidance were offered. This in turn impacts the regional ecological restoration and sustainable management of water resources. In this study, soil water content data in depth of 0-5 m was obtained by long-term field observation and geostatistical method in 6 small watersheds covered with different land use pattern. Profile characteristics and spatial-temporal patterns of soil water were compared between different land use types, hillslopes, and watersheds. The results showed that: (1) Introduced vegetation consumed excessive amount of water when compared with native grassland and farmland, and induced temporally stable soil desiccation in depth of 0-5 m. The introduced vegetation decreased soil water content to levels lower than the reference value representing no human impact in all soil layers. (2) The analysis of differences in soil water at hillslope and watershed scales indicated that land use determined the spatial and temporal variability of soil water. Soil water at watershed scale increased with the increasing area of farmland, and decreased with increasing percentage of introduced vegetation. Land use structure determined the soil water condition and land use pattern determined the spatial-temporal variability of soil water at watershed scale. (3) Large-scale revegetation with introduced vegetation diminished the spatial heterogeneity of soil water at different scales. Land use pattern adjustment could be used to improve the water resources management and maintain the sustainability of vegetation restoration.
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Monitoring Urban Greenness Dynamics Using Multiple Endmember Spectral Mixture Analysis
Gan, Muye; Deng, Jinsong; Zheng, Xinyu; Hong, Yang; Wang, Ke
2014-01-01
Urban greenness is increasingly recognized as an essential constituent of the urban environment and can provide a range of services and enhance residents’ quality of life. Understanding the pattern of urban greenness and exploring its spatiotemporal dynamics would contribute valuable information for urban planning. In this paper, we investigated the pattern of urban greenness in Hangzhou, China, over the past two decades using time series Landsat-5 TM data obtained in 1990, 2002, and 2010. Multiple endmember spectral mixture analysis was used to derive vegetation cover fractions at the subpixel level. An RGB-vegetation fraction model, change intensity analysis and the concentric technique were integrated to reveal the detailed, spatial characteristics and the overall pattern of change in the vegetation cover fraction. Our results demonstrated the ability of multiple endmember spectral mixture analysis to accurately model the vegetation cover fraction in pixels despite the complex spectral confusion of different land cover types. The integration of multiple techniques revealed various changing patterns in urban greenness in this region. The overall vegetation cover has exhibited a drastic decrease over the past two decades, while no significant change occurred in the scenic spots that were studied. Meanwhile, a remarkable recovery of greenness was observed in the existing urban area. The increasing coverage of small green patches has played a vital role in the recovery of urban greenness. These changing patterns were more obvious during the period from 2002 to 2010 than from 1990 to 2002, and they revealed the combined effects of rapid urbanization and greening policies. This work demonstrates the usefulness of time series of vegetation cover fractions for conducting accurate and in-depth studies of the long-term trajectories of urban greenness to obtain meaningful information for sustainable urban development. PMID:25375176
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Global Analysis of Empirical Relationships Between Annual Climate and Seasonality of NDVI
NASA Technical Reports Server (NTRS)
Potter, C. S.; Brooks, V.
1997-01-01
This paper describes the use of satellite data to calibrate a new climate-vegetation greenness relationship for global change studies. We examined statistical relationships between annual climate indexes (temperature, precipitation, and surface radiation) and seasonal attributes If the AVHRR Normalized Difference Vegetation Index (NDVI) time series for the mid-1980's in order to refine our understanding of intra-annual patterns and global abiotic controls on natural vegetation dynamics. Multiple linear regression results using global 1o gridded data sets suggest that three climate indexes: degree days (growing/chilling), annual precipitation total, and an annual moisture index together can account to 70-80 percent of the geographic variation in the NDVI seasonal extremes (maximum and minimum values) for the calibration year 1984. Inclusion of the same annual climate index values from the previous year explains no substantial additional portion of the global scale variation in NDVI seasonal extremes. The monthly timing of NDVI extremes is closely associated with seasonal patterns in maximum and minimum temperature and rainfall, with lag times of 1 to 2 months. We separated well-drained areas from lo grid cells mapped as greater than 25 percent inundated coverage for estimation of both the magnitude and timing of seasonal NDVI maximum values. Predicted monthly NDVI, derived from our climate-based regression equations and Fourier smoothing algorithms, shows good agreement with observed NDVI for several different years at a series of ecosystem test locations from around the globe. Regions in which NDVI seasonal extremes are not accurately predicted are mainly high latitude zones, mixed and disturbed vegetation types, and other remote locations where climate station data are sparse.
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Land surface phenological responses to land use and climate variation in a changing Central Asia
NASA Astrophysics Data System (ADS)
Kariyeva, Jahan
During the last few decades Central Asia has experienced widespread changes in land cover and land use following the socio-economic and institutional transformations of the region catalyzed by the USSR collapse in 1991. The decade-long drought events and steadily increasing temperature regimes in the region came on top of these institutional transformations, affecting the long term and landscape scale vegetation responses. This research is based on the need to better understand the potential ecological and policy implications of climate variation and land use practices in the contexts of landscape-scale changes dynamics and variability patterns of land surface phenology responses in Central Asia. The land surface phenology responses -- the spatio-temporal dynamics of terrestrial vegetation derived from the remotely sensed data -- provide measurements linked to the timing of vegetation growth cycles (e.g., start of growing season) and total vegetation productivity over the growing season, which are used as a proxy for the assessment of effects of variations in environmental settings. Local and regional scale assessment of the before and after the USSR collapse vegetation response patterns in the natural and agricultural systems of the Central Asian drylands was conducted to characterize newly emerging links (since 1991) between coupled human and natural systems, e.g., socio-economic and policy drivers of altered land and water use and distribution patterns. Spatio-temporal patterns of bioclimatic responses were examined to determine how phenology is associated with temperature and precipitation in different land use types, including rainfed and irrigated agricultural types. Phenological models were developed to examine relationship between environmental drivers and effect of their altitudinal and latitudinal gradients on the broad-scale vegetation response patterns in non-cropland ecosystems of the desert, steppe, and mountainous regional landscapes of Central Asia. The study results demonstrated that the satellite derived measurements of temporal cycles of vegetation greenness and productivity data was a valuable bioclimatic integrator of climatic and land use variation in Central Asia. The synthesis of broad-scale phenological changes in Central Asia showed that linkages of natural and human systems vary across space and time comprising complex and tightly integrated patterns and processes that are not evident when studied separately.
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Kang, Yoonja; Tang, Ying-Zhong; Taylor, Gordon T; Gobler, Christopher J
2017-02-01
To date, the life stages of pelagophytes have been poorly described. This study describes the ability of Aureoumbra lagunensis to enter a resting stage in response to environmental stressors including high temperature, nutrient depletion, and darkness as well as their ability to revert from resting cells back to vegetative cells after exposure to optimal light, temperature, and nutrient conditions. Resting cells became round in shape and larger in size, filled with red accumulation bodies, had smaller and fewer plastids, more vacuolar space, contained lower concentrations of chl a and RNA, displayed reduced photosynthetic efficiency, and lower respiration rates relative to vegetative cells. Analysis of vegetative and resting cells using Raman microspectrometry indicated resting cells were enriched in sterols within red accumulation bodies and were depleted in pigments relative to vegetative cells. Upon reverting to vegetative cells, cells increased their chl a content, photosynthetic efficiency, respiration rate, and growth rate and lost accumulation bodies as they became smaller. The time required for resting cells to resume vegetative growth was proportional to both the duration and temperature of dark storage, possibly due to higher metabolic demands on stored energy (sterols) reserves during longer period of storage and/or storage at higher temperature (20°C vs. 10°C). Resting cells kept in the dark at 10°C for 7 months readily reverted back to vegetative cells when transferred to optimal conditions. Thus, the ability of Aureoumbra to form a resting stage likely enables them to form annual blooms within subtropic ecosystems, resist temperature extremes, and may facilitate geographic expansion via anthropogenic transport. © 2016 Phycological Society of America.
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DOE Office of Scientific and Technical Information (OSTI.GOV)
Sanders, S.W.; Maxcy, R.B.
1979-01-01
Representative highly radiation-resistant Moraxella-Acinetobacter (M-A), Pseudomonas radiora, Micrococcus radiodurans, and Micrococcus radiophilus exhibited a wide variety of division systems and cell wall characteristics. However, the more resistant M-A possessed unusually thick cell walls, indicating a possible role of the cell wall in radiation resistance in the M-A. Thick septation was present in most of the bacteria studied, but was absent in P. radiora, thus excluding this as a necessity for high resistance. Reliable determination of the number of division planes of the M-A for use as a taxonomic criterion was achieved by the direct observation of dividing cells. The highlymore » resistant M-A were found to divide in multiple planes and had base compositions of 54.0 to 57.5%, unlike typical Moraxella and/or Acinetobacter species. The taxonomic position of most highly resistant bacteria remains unclear.« less
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NASA Astrophysics Data System (ADS)
Ivory, S.; Russell, J. L.; Cohen, A. S.
2010-12-01
Threats to tropical biodiversity with serious and costly implications for both ecosystems and human well-being in Africa have led the IPCC to classify this region as vulnerable to negative impacts from climate change. Yet little is known about how vegetation communities respond to altered patterns of rainfall and evaporation. Paleoclimate records within the tropics can help answer questions about how vegetation response to climate forcing changes over time. However, sparse spatial extent of records and uncertainty surrounding the climate-vegetation relationship complicate these insights. Understanding the climatic mechanisms involved in landscape change at all temporal scales creates the need for quantitative constraints of the modern relationship between climatic controls, hydrology, and vegetation. Though modern observational data can help elucidate this relationship, low resolution and complicated rainfall/vegetation associations make them less than ideal. Satellite data of vegetation productivity (NDVI) with continuous high-resolution spatial coverage provides a robust and elegant tool for identifying the link between global and regional controls and vegetation. We use regression analyses of variables either previously proposed or potentially important in regulating Afro-tropical vegetation (insolation, out-going long-wave radiation, geopotential height, Southern Oscillation Index, Indian Ocean Dipole, Indian Monsoon precipitation, sea-level pressure, surface wind, sea-surface temperature) on continuous, time-varying spatial fields of 8km NDVI for sub-Saharan Africa. These analyses show the importance of global atmospheric controls in producing regional intra-annual and inter-annual vegetation variability. Dipole patterns emerge primarily correlated with both the seasonal and inter-annual extent of the Intertropical Convergence Zone (ITCZ). Inter-annual ITCZ variability drives patterns in African vegetation resulting from the effect of insolation anomalies and ENSO events on atmospheric circulation rather than sea surface temperatures or teleconnections to mid/high latitudes. Global controls on tropical atmospheric circulation regulate vegetation throughout sub-Saharan Africa on many time scales through alteration of dry season length and moisture convergence, rather than precipitation amount.
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Exploratory spatial data analysis of global MODIS active fire data
NASA Astrophysics Data System (ADS)
Oom, D.; Pereira, J. M. C.
2013-04-01
We performed an exploratory spatial data analysis (ESDA) of autocorrelation patterns in the NASA MODIS MCD14ML Collection 5 active fire dataset, for the period 2001-2009, at the global scale. The dataset was screened, resulting in an annual rate of false alarms and non-vegetation fires ranging from a minimum of 3.1% in 2003 to a maximum of 4.4% in 2001. Hot bare soils and gas flares were the major sources of false alarms and non-vegetation fires. The data were aggregated at 0.5° resolution for the global and local spatial autocorrelation Fire counts were found to be positively correlated up to distances of around 200 km, and negatively for larger distances. A value of 0.80 (p = 0.001, α = 0.05) for Moran's I indicates strong spatial autocorrelation between fires at global scale, with 60% of all cells displaying significant positive or negative spatial correlation. Different types of spatial autocorrelation were mapped and regression diagnostics allowed for the identification of spatial outlier cells, with fire counts much higher or lower than expected, considering their spatial context.
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NASA Astrophysics Data System (ADS)
Metzen, D.; Sheridan, G. J.; Benyon, R. G.; Bolstad, P. V.; Nyman, P.; Lane, P. N. J.
2017-12-01
Large areas of forest are often treated as being homogeneous just because they fall in a single climate category. However, we observe strong vegetation patterns in relation to topography in SE Australian forests and thus hypothesise that ET will vary spatially as well. Spatial heterogeneity evolves over different temporal scales in response to climatic forcing with increasing time lag from soil moisture (sub-yearly), to vegetation (10s -100s of years) to soil properties and topography (>100s of years). Most importantly, these processes and time scales are not independent, creating feedbacks that result in "co-evolved stable states" which yield the current spatial terrain, vegetation and ET patterns. We used up-scaled sap flux and understory ET measurements from water-balance plots, as well as LiDAR derived terrain and vegetation information, to infer links between spatio-temporal energy and water fluxes, topography and vegetation patterns at small catchment scale. Topography caused variations in aridity index between polar and equatorial-facing slopes (1.3 vs 1.8), which in turn manifested in significant differences in sapwood area index (6.9 vs 5.8), overstory LAI (3.0 vs 2.3), understory LAI (0.5 vs 0.4), sub-canopy radiation load (4.6 vs 6.8 MJ m-2 d-1), overstory transpiration (501 vs 347 mm a-1) and understory ET (79 vs 155 mm a-1). Large spatial variation in overstory transpiration (195 to 891 mm a-1) was observed over very short distances (100s m); a range representative of diverse forests such as arid open woodlands and wet mountain ash forests. Contrasting, non-linear overstory and understory ET patterns were unveiled between aspects, and topographic thresholds were lower for overstory than understory ET. While ET partitioning remained stable on polar-facing slopes regardless of slope position, overstory contribution gradually decreased with increasing slope inclination on equatorial aspects. Further, we show that ET patterns and controls underlie strong seasonality and overstory LAI explained 61% of variations in ET partitioning over the entire domain. Strong links between vegetation, topography and energy and water fluxes offer the potential to exploit terrain and vegetation patterns to infer spatio-temporal ET dynamics ultimately helping manage water resources in a changing climate.
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Evaluating the impact of a wide range of vegetation densities on river channel pattern
NASA Astrophysics Data System (ADS)
Pattison, Ian; Roucou, Ron
2016-04-01
Braided rivers are very dynamic systems which have complex controls over their planform and flow dynamics. Vegetation is one variable which influences channel geometry and pattern, through its effect on local flow hydraulics and the process continuum of sediment erosion-transport-deposition. Furthermore, where in the braided floodplain stable vegetation develops depends on the temporal sequencing of the river discharge i.e. floods. Understanding the effect of vegetation in these highly dynamic systems has multiple consequences for human activity and floodplain management. This paper focusses on the specific role of vegetation density in controlling braided river form and processes. Previous research in this field has been contradictory; with Gran and Paola (2001) finding that increasing vegetation density decreased the number of active channels. In contrast, Coulthard (2005] observed that as vegetation become denser there was an increase in the number of channels. This was hypothesized to be caused by flow separation around vegetation and the development of bars immediately downstream of the plant. This paper reports the results from a set of experiments in a 4m by 1m flume, where discharge, slope and sediment size were kept constant. Artificial grass was used to represent vegetation with a density ranging from 50 plants/m2 to 400 plants/m2. Digital photographs, using a GoPro camera with a fish eye lens, were taken from ~1m above the flume at an interval of 30 seconds during the 3 hour experiment. The experiments showed that as the vegetation density increased from 50 to 150 plants/m2, the number of channel bars developing doubled from 12 to 24. At vegetation densities greater than 150 plants/m2 there was a decline in the number of bars created to a minimum of 8 bars for a density of 400 plants/m2. We attribute these patterns to the effect that the vegetation has on flow hydraulics, sediment transport processes and the spatial patterns of erosion and deposition. We develop a simple conceptual model to explain the observations along the wide range of vegetation densities investigated. At low plant densities, each plant acted independently and caused flow separation and convergence around each plant, similar to in the Coulthard (2005] experiment. At medium densities, individual plants start to interact together with narrow channels developing longitudinally between vegetative bars. Finally at very high densities, there was both lateral and longitudinal interaction between plants meaning that flow was diverted around them forming wandering, meandering channels. In summary, the relationship between vegetation density and channel braiding is more complex than previous thought, taking a parabolic shape, with maximum braiding occurring at medium vegetation densities.
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Woody-Herbaceous Species Coexistence in Mulga Hillslopes: Modelling Structure and Function
NASA Astrophysics Data System (ADS)
Soltanjalili, M. J.; Saco, P. M.; Willgoose, G. R.
2016-12-01
The fundamental processes underlying the coexistence of woody and herbaceous species in arid and semi-arid areas have been a topic of intense research during the last few decades. Experimental and modelling studies have both supported and disputed alternative hypotheses explaining this phenomenon. Vegetation models including the key processes that drive coexistence can be used to understand vegetation pattern dynamics and structure under current climate conditions, and to predict changes under future conditions. Here we present work done towards linking the observations to modelling. The model captures woody-herbaceous coexistence along a rainfall gradient characteristic of typical conditions on Mulga ecosystems in Australia. The dynamic vegetation model simulates the spatial dynamics of overland flow, soil moisture and vegetation growth of two species. It incorporates key mechanisms for coexistence and pattern formation, including facilitation by evaporation reduction through shading, and infiltration feedbacks, local and non-local seed dispersal, competition for water uptake. Model outcomes, obtained including diflerent mechanisms, are qualitatively compared to typical vegetation cover patterns in the Australian Mulga bioregion where bush fire is very infrequent and the fate of vegetation cover is mostly determined by intra- and interspecies interactions. Through these comparisons, and by drawing on the large number of recent studies that have delivered new insights into the dynamics of such ecosystems, we identify main mechanisms that need an improved representation in the dynamic vegetation models. We show that a realistic parameterization of the model leads to results which are aligned with the observations reported in the literature. At the lower end of the rainfall gradient woody species coexist with herbaceous species within a sparse banded pattern, while at higher rainfall woody species tend to dominate the landscape.
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Water use patterns of estuarine vegetation in a tidal creek system.
Wei, Lili; Lockington, David A; Poh, Seng-Chee; Gasparon, Massimo; Lovelock, Catherine E
2013-06-01
Water availability is a key determinant of the zonation patterns in estuarine vegetation, but water availability and the use of different water sources over space and time are not well understood. We have determined the seasonal water use patterns of riparian vegetation over an estuarine ecotone. Our aim was to investigate how the water use patterns of estuarine vegetation respond to variations in the availability of tidal creek water and rain-derived freshwater. The levels of natural stable isotopes of oxygen and hydrogen were assessed in the stem of the mangrove Avicennia marina (tall and scrub growth forms), Casuarina glauca and Melaleuca quinquenervia that were distributed along transects from river/creek-front towards inland habitats. The isotopic composition of plant tissues and the potential water sources were assessed in both the wet season, when freshwater from rainfall is present, and the dry season, when mangrove trees are expected to be more dependent on tidal water, and when Casuarina and Melaleuca are expected to be dependent on groundwater. Our results indicate that rainwater during the wet season contributes significantly to estuarine vegetation, even to creek-side mangroves which are inundated by tidal creek water daily, and that estuarine vegetation depends primarily on freshwater throughout the year. In contrast, high intertidal scrub mangroves were found to use the greatest proportion of tidal creek water, supplemented by groundwater in the dry season. Contrary to prediction, inland trees C. glauca and M. quinquenervia were found also to rely predominantly on rainwater--even in the dry season. The results of this study reveal a high level of complexity in vegetation water use in estuarine settings.
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Early-warning signals for catastrophic soil degradation
NASA Astrophysics Data System (ADS)
Karssenberg, Derek
2010-05-01
Many earth systems have critical thresholds at which the system shifts abruptly from one state to another. Such critical transitions have been described, among others, for climate, vegetation, animal populations, and geomorphology. Predicting the timing of critical transitions before they are reached is of importance because of the large impact on nature and society associated with the transition. However, it is notably difficult to predict the timing of a transition. This is because the state variables of the system show little change before the threshold is reached. As a result, the precision of field observations is often too low to provide predictions of the timing of a transition. A possible solution is the use of spatio-temporal patterns in state variables as leading indicators of a transition. It is becoming clear that the critically slowing down of a system causes spatio-temporal autocorrelation and variance to increase before the transition. Thus, spatio-temporal patterns are important candidates for early-warning signals. In this research we will show that these early-warning signals also exist in geomorphological systems. We consider a modelled vegetation-soil system under a gradually increasing grazing pressure causing an abrupt shift towards extensive soil degradation. It is shown that changes in spatio-temporal patterns occur well ahead of this catastrophic transition. A distributed model describing the coupled processes of vegetation growth and geomorphological denudation is adapted. The model uses well-studied simple process representations for vegetation and geomorphology. A logistic growth model calculates vegetation cover as a function of grazing pressure and vegetation growth rate. Evolution of the soil thickness is modelled by soil creep and wash processes, as a function of net rain reaching the surface. The vegetation and soil system are coupled by 1) decreasing vegetation growth with decreasing soil thickness and 2) increasing soil wash with decreasing vegetation cover. The model describes a critical, catastrophic transition of an underexploited system with low grazing pressure towards an overexploited system. The underexploited state has high vegetation cover and well developed soils, while the overexploited state has low vegetation cover and largely degraded soils. We first show why spatio-temporal patterns in vegetation cover, morphology, erosion rate, and sediment load should be expected to change well before the critical transition towards the overexploited state. Subsequently, spatio-temporal patterns are quantified by calculating statistics, in particular first order statistics and autocorrelation in space and time. It is shown that these statistics gradually change before the transition is reached. This indicates that the statistics may serve as early-warning signals in real-world applications. We also discuss the potential use of remote sensing to predict the critical transition in real-world landscapes.
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Zhang, Meilin; Zhu, Yufeng; Li, Ping; Chang, Hong; Wang, Xuan; Liu, Weiqiao; Zhang, Yuwen; Huang, Guowei
2015-01-01
Few studies have examined the association between Asian dietary pattern and prediabetes, in particular, the Chinese diet. We conducted a cross-sectional study to identify dietary patterns associated with impaired fasting glucose (IFG) which considered a state of prediabetes in Chinese men. The study included 1495 Chinese men aged 20 to 75 years. Information about diet was obtained using an 81-item food frequency questionnaire (FFQ), and 21 predefined food groups were considered in a factor analysis. Three dietary patterns were generated by factor analysis: (1) a vegetables-fruits pattern; (2) an animal offal-dessert pattern; and (3) a white rice-red meat pattern. The multivariate-adjusted odds ratio (OR) of IFG for the highest tertile of the animal offal-dessert pattern in comparison with the lowest tertile was 3.15 (95% confidence intervals (CI): 1.87–5.30). The vegetables-fruits dietary pattern was negatively associated with the risk of IFG, but a significant association was observed only in the third tertile. There was no significant association between IFG and the white rice-red meat pattern. Our findings indicated that the vegetables-fruits dietary pattern was inversely associated with IFG, whereas the animal offal-dessert pattern was associated with an increased risk of IFG in Chinese men. Further prospective studies are needed to elucidate the diet-prediabetes relationships. PMID:26402695
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Zhang, Meilin; Zhu, Yufeng; Li, Ping; Chang, Hong; Wang, Xuan; Liu, Weiqiao; Zhang, Yuwen; Huang, Guowei
2015-09-21
Few studies have examined the association between Asian dietary pattern and prediabetes, in particular, the Chinese diet. We conducted a cross-sectional study to identify dietary patterns associated with impaired fasting glucose (IFG) which considered a state of prediabetes in Chinese men. The study included 1495 Chinese men aged 20 to 75 years. Information about diet was obtained using an 81-item food frequency questionnaire (FFQ), and 21 predefined food groups were considered in a factor analysis. Three dietary patterns were generated by factor analysis: (1) a vegetables-fruits pattern; (2) an animal offal-dessert pattern; and (3) a white rice-red meat pattern. The multivariate-adjusted odds ratio (OR) of IFG for the highest tertile of the animal offal-dessert pattern in comparison with the lowest tertile was 3.15 (95% confidence intervals (CI): 1.87-5.30). The vegetables-fruits dietary pattern was negatively associated with the risk of IFG, but a significant association was observed only in the third tertile. There was no significant association between IFG and the white rice-red meat pattern. Our findings indicated that the vegetables-fruits dietary pattern was inversely associated with IFG, whereas the animal offal-dessert pattern was associated with an increased risk of IFG in Chinese men. Further prospective studies are needed to elucidate the diet-prediabetes relationships.
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NASA Astrophysics Data System (ADS)
Hegedüs, Ramón; Barta, András; Bernáth, Balázs; Benno Meyer-Rochow, Victor; Horváth, Gábor
2007-08-01
Radiance, color, and polarization of the light in forests combine to create complex optical patterns. Earlier sporadic polarimetric studies in forests were limited by the narrow fields of view of the polarimeters used in such studies. Since polarization patterns in the entire upper hemisphere of the visual environment of forests could be important for forest-inhabiting animals that make use of linearly polarized light for orientation, we measured 180° field-of-view polarization distributions in Finnish forests. From a hot air balloon we also measured the polarization patterns of Hungarian grasslands lit by the rising sun. We found that the pattern of the angle of polarization α of sunlit grasslands and sunlit tree canopies was qualitatively the same as that of the sky. We show here that contrary to an earlier assumption, the α-pattern characteristic of the sky always remains visible underneath overhead vegetation, independently of the solar elevation and the sky conditions (clear or partly cloudy with visible sun's disc), provided the foliage is sunlit and not only when large patches of the clear sky are visible through the vegetation. Since the mirror symmetry axis of the α-pattern of the sunlit foliage is the solar-antisolar meridian, the azimuth direction of the sun, occluded by vegetation, can be assessed in forests from this polarization pattern. Possible consequences of this robust polarization feature of the optical environment in forests are briefly discussed with regard to polarization-based animal navigation.
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On the sources of vegetation activity variation, and their relation with water balance in Mexico
F. Mora; L.R. Iverson
1998-01-01
Natural landscape surface processes are largely controlled by the relationship between climate and vegetation. Water balance integrates the effects of climate on patterns of vegetation distribution and productivity, and for that season, functional relationships can be established using water balance variables as predictors of vegetation response. In this study, we...
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Integrating Vegetation Classification, Mapping, and Strategic Inventory for Forest Management
C. K. Brewer; R. Bush; D. Berglund; J. A. Barber; S. R. Brown
2006-01-01
Many of the analyses needed to address multiple resource issues are focused on vegetation pattern and process relationships and most rely on the data models produced from vegetation classification, mapping, and/or inventory. The Northern Region Vegetation Mapping Project (R1-VMP) data models are based on these three integrally related, yet separate processes. This...
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The importance of environment vs. disturbance in the vegetation mosaic of central Arizona
Cynthia D. Huebner; John L. Vankat
2003-01-01
The vegetation of central Arizona is a mosaic of four vegetation types: chaparral, chaparral grassland, woodland, and woodland grassland. We analysed ten environmental variables, three disturbance variables, and five disturbance indicators to answer the question: What is the relative importance of environment and disturbance in explaining the vegetation pattern of our...
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Jeffrey E. Ott; Stewart C. Sanderson; E. Durant McArthur
2015-01-01
Vegetation surveys at Zion National Park (Zion), Utah, have contributed to our understanding of plant community patterns and their relationship to environmental factors. Previous authors used vegetation plot data to characterize vegetation types at Zion following conventional procedures that emphasize spatial discreteness and dominant species. We developed and applied...
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Bao, Wei; Bowers, Katherine; Tobias, Deirdre K; Olsen, Sjurdur F; Chavarro, Jorge; Vaag, Allan; Kiely, Michele; Zhang, Cuilin
2014-01-01
Background: Low-carbohydrate diets (LCDs) have been vastly popular for weight loss. The association between a low-carbohydrate dietary pattern and risk of gestational diabetes mellitus (GDM) remains unknown. Objective: We aimed to prospectively examine the association of 3 prepregnancy low-carbohydrate dietary patterns with risk of GDM. Design: We included 21,411 singleton pregnancies in the Nurses’ Health Study II. Prepregnancy LCD scores were calculated from validated food-frequency questionnaires, including an overall LCD score on the basis of intakes of carbohydrate, total protein, and total fat; an animal LCD score on the basis of intakes of carbohydrate, animal protein, and animal fat; and a vegetable LCD score on the basis of intakes of carbohydrate, vegetable protein, and vegetable fat. A higher score reflected a higher intake of fat and protein and a lower intake of carbohydrate, and it indicated closer adherence to a low-carbohydrate dietary pattern. RRs and 95% CIs were estimated by using generalized estimating equations with log-binomial models. Results: We documented 867 incident GDM pregnancies during 10 y follow-up. Multivariable-adjusted RRs (95% CIs) of GDM for comparisons of highest with lowest quartiles were 1.27 (1.06, 1.51) for the overall LCD score (P-trend = 0.03), 1.36 (1.13, 1.64) for the animal LCD score (P-trend = 0.003), and 0.84 (0.69, 1.03) for the vegetable LCD score (P-trend = 0.08). Associations between LCD scores and GDM risk were not significantly modified by age, parity, family history of diabetes, physical activity, or overweight status. Conclusions: A prepregnancy low-carbohydrate dietary pattern with high protein and fat from animal-food sources is positively associated with GDM risk, whereas a prepregnancy low-carbohydrate dietary pattern with high protein and fat from vegetable food sources is not associated with the risk. Women of reproductive age who follow a low-carbohydrate dietary pattern may consider consuming vegetable rather than animal sources of protein and fat to minimize their risk of GDM. PMID:24717341
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Trends in fire patterns in a southern African savanna under alternative land use practices
A. T. Hudak; D. H. K. Fairbanks; B. H. Brockett
2004-01-01
Climate, topography, vegetation and land use interact to influence fire regimes.Variable fire regimes may promote landscape heterogeneity, diversification in vegetation pattern and biotic diversity. The objective was to compare effects of alternative land use practices on landscape heterogeneity. Patch characteristics of fire scars were measured from 21 annual burn...
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Ecohydrology of an outbreak: Mountain pine beetle impacts trees in drier landscape positions first
Kendra E. Kaiser; Ryan E. Emanuel
2013-01-01
Vegetation pattern and landscape structure intersect to exert strong control over ecohydrological dynamics at the watershed scale. The hydrologic implications of vegetation disturbance (e.g. fire, disease) depend on the spatial pattern and form of environmental change. Here, we investigate this intersection at Tenderfoot Creek Experimental Forest (TCEF), Montana, with...
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NASA Astrophysics Data System (ADS)
Verola Mataveli, Guilherme Augusto; Siqueira Silva, Maria Elisa; Pereira, Gabriel; da Silva Cardozo, Francielle; Shinji Kawakubo, Fernando; Bertani, Gabriel; Cezar Costa, Julio; de Cássia Ramos, Raquel; Valéria da Silva, Viviane
2018-01-01
In the Brazilian savannas (Cerrado biome) fires are natural and a tool for shifting land use; therefore, temporal and spatial patterns result from the interaction of climate, vegetation condition and human activities. Moreover, orbital sensors are the most effective approach to establish patterns in the biome. We aimed to characterize fire, precipitation and vegetation condition regimes and to establish spatial patterns of fire occurrence and their correlation with precipitation and vegetation condition in the Cerrado. The Cerrado was first and second biome for the occurrence of burned areas (BA) and hotspots, respectively. Occurrences are higher during the dry season and in the savanna land use. Hotspots and BA tend to decrease, and concentrate in the north, but more intense hotspots are not necessarily located where concentration is higher. Spatial analysis showed that averaged and summed values can hide patterns, such as for precipitation, which has the lowest average in August, but minimum precipitation in August was found in 7 % of the Cerrado. Usually, there is a 2-3-month lag between minimum precipitation and maximum hotspots and BA, while minimum VCI and maximum hotspots and BA occur in the same month. Hotspots and BA are better correlated with VCI than precipitation, qualifying VCI as an indicator of the susceptibility of vegetation to ignition.
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Monosodium Glutamate Intake, Dietary Patterns and Asthma in Chinese Adults
Shi, Zumin; Yuan, Baojun; Wittert, Gary A.; Pan, Xiaoqun; Dai, Yue; Adams, Robert; Taylor, Anne W.
2012-01-01
Objectives Emerging evidence shows that diet is related to asthma. The aim of this analysis was to investigate the association between monosodium glutamate (MSG) intake, overall dietary patterns and asthma. Methods Data from 1486 Chinese men and women who participated in the Jiangsu Nutrition Study (JIN) were analyzed. In this study, MSG intake and dietary patterns were quantitatively assessed in 2002. Information on asthma history was collected during followed-up in 2007. Results Of the sample, 1.4% reported ever having asthma. MSG intake was not positively associated with asthma. There was a significant positive association between ‘traditional’ (high loadings on rice, wheat flour, and vegetable) food pattern and asthma. No association between ’macho’ (rich in meat and alcohol), ‘sweet tooth’ (high loadings on cake, milk, and yoghurt) ‘vegetable rich’ (high loadings on whole grain, fruit, and vegetable) food patterns and asthma was found. Smoking and overweight were not associated with asthma in the sample. Conclusion While a ‘Traditional’ food pattern was positively associated with asthma among Chinese adults, there was no significant association between MSG intake and asthma. PMID:23240044
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Soldateli, Betina; Vigo, Alvaro; Giugliani, Elsa Regina Justo
2016-01-01
The duration and pattern of breastfeeding can influence the consumption of fruits and vegetables in later childhood. To investigate the association between pattern and duration of breastfeeding and consumption of fruits and vegetables in children aged between 4 and 7 years. We conducted a secondary analysis using data from a former randomized clinical trial with 323 adolescent mothers, their children, and maternal grandmothers, when they cohabited. Information on infant feeding was collected monthly during the first 6 months of life, every two months until the child was 1 year old over and when children were between 4 and 7 years old. The associations between duration of breastfeeding and exclusive breastfeeding and consumption of fruits and vegetables were tested by a logistic regression model. Approximately 60% and 45% of children consumed fruits and vegetables, respectively, five or more times a week. Consumption of vegetables among 4-7-year-old children was higher in children who were breastfed for 12 months or longer (OR 2.7; 95%CI 1.49-4.93); however, exclusive breastfeeding duration did not have a significant association with consumption of vegetables (OR 1.5; 95%CI 0.70-3.04). There was no association between weekly consumption of fruits and duration of breastfeeding (OR 1.3; 95%CI 0.71-2.30) or exclusive breastfeeding (OR 0.7; 95%CI 0.34-1.44). Longer duration of breastfeeding was positively associated with consumption of vegetables in children aged 4-7 years; however, there was no association with consumption of fruits. Exclusive breastfeeding duration did not have influence on consumption of fruits or vegetables.
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Mayor, Ángeles G; Goirán, Silvana B; Vallejo, V Ramón; Bautista, Susana
2016-12-15
Fire-prone Mediterranean shrublands may be seriously threatened by land degradation due to progressive opening of the vegetation cover driven by increasing drought and fire recurrence. However, information about the consequences of this opening process for critical ecosystem functions is scant. In this work, we studied the influence of vegetation amount, type, and spatial pattern in the variation of extracellular soil enzyme activity (acid phosphatase, β-glucosidase, and urease) in fire-prone shrublands in eastern Spain. Soil was sampled in vegetation-patch and open-interpatch microsites in 15 shrubland sites affected by large wildfires in 1991. On average, the activities of the three enzymes were 1.5 (β-glucosidase and urease) to 1.7 (acid phosphatase) times higher in soils under vegetation patches than in adjacent interpatches. In addition, phosphatase activity for both microsites significantly decreased with the fragmentation of the vegetation. This result was attributed to a lower influence of roots -the main source of acid phosphatase- in the bigger interpatches of the sites with lower patch cover, and to feedbacks between vegetation pattern, redistribution of resources, and soil quality during post-fire vegetation dynamics. Phosphatase activity was also 1.2 times higher in patches of resprouter plants than in patches of non-resprouters, probably due to the faster post-fire recovery and older age of resprouter patches in these fire-prone ecosystems. The influence on the studied enzymes of topographic and climatic factors acting at the landscape scale was insignificant. According to our results, variations in the cover, pattern, and composition of vegetation patches may have profound impacts on soil enzyme activity and associated nutrient cycling processes in fire-prone Mediterranean shrublands, particularly in those related to phosphorus. Copyright © 2016 Elsevier B.V. All rights reserved.
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Soil-geomorphic heterogeneity governs patchy vegetation dynamics at an arid ecotone.
Bestelmeyer, Brandon T; Ward, Judy P; Havstad, Kris M
2006-04-01
Soil properties are well known to affect vegetation, but the role of soil heterogeneity in the patterning of vegetation dynamics is poorly documented. We asked whether the location of an ecotone separating grass-dominated and sparsely vegetated areas reflected only historical variation in degradation or was related to variation in inherent soil properties. We then asked whether changes in the cover and spatial organization of vegetated and bare patches assessed using repeat aerial photography reflected self-organizing dynamics unrelated to soil variation or the stable patterning of soil variation. We found that the present-day ecotone was related to a shift from more weakly to more strongly developed soils. Parts of the ecotone were stable over a 60-year period, but shifts between bare and vegetated states, as well as persistently vegetated and bare states, occurred largely in small (<40 m2) patches throughout the study area. The probability that patches were presently vegetated or bare, as well as the probability that vegetation persisted and/or established over the 60-year period, was negatively related to surface calcium carbonate and positively related to subsurface clay content. Thus, only a fraction of the landscape was susceptible to vegetation change, and the sparsely vegetated area probably featured a higher frequency of susceptible soil patches. Patch dynamics and self-organizing processes can be constrained by subtle (and often unrecognized) soil heterogeneity.
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Dohn, Justin; Augustine, David J; Hanan, Niall P; Ratnam, Jayashree; Sankaran, Mahesh
2017-02-01
The majority of research on savanna vegetation dynamics has focused on the coexistence of woody and herbaceous vegetation. Interactions among woody plants in savannas are relatively poorly understood. We present data from a 10-yr longitudinal study of spatially explicit growth patterns of woody vegetation in an East African savanna following exclusion of large herbivores and in the absence of fire. We examined plant spatial patterns and quantified the degree of competition among woody individuals. Woody plants in this semiarid savanna exhibit strongly clumped spatial distributions at scales of 1-5 m. However, analysis of woody plant growth rates relative to their conspecific and heterospecific neighbors revealed evidence for strong competitive interactions at neighborhood scales of up to 5 m for most woody plant species. Thus, woody plants were aggregated in clumps despite significantly decreased growth rates in close proximity to neighbors, indicating that the spatial distribution of woody plants in this region depends on dispersal and establishment processes rather than on competitive, density-dependent mortality. However, our documentation of suppressive effects of woody plants on neighbors also suggests a potentially important role for tree-tree competition in controlling vegetation structure and indicates that the balanced-competition hypothesis may contribute to well-known patterns in maximum tree cover across rainfall gradients in Africa. © 2016 by the Ecological Society of America.
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Sediment and Vegetation Controls on Delta Channel Networks
NASA Astrophysics Data System (ADS)
Lauzon, R.; Murray, A. B.; Piliouras, A.; Kim, W.
2016-12-01
Numerous factors control the patterns of distributary channels formed on a delta, including water and sediment discharge, grain size, sea level rise rates, and vegetation type. In turn, these channel networks influence the shape and evolution of a delta, including what types of plant and animal life - such as humans - it can support. Previous fluvial modeling and flume experiments, outside of the delta context, have addressed how interactions between sediment and vegetation, through their influence on lateral transport of sediment, determine what type of channel networks develops. Similar interactions likely also shape delta flow patterns. Vegetation introduces cohesion, tending to reduce channel migration rates and strengthen existing channel banks, reinforcing existing channels and resulting in localized, relatively stable flow patterns. On the other hand, sediment transport processes can result in lateral migration and frequent switching of active channels, resulting in flow resembling that of a braided stream. While previous studies of deltas have indirectly explored the effects of vegetation through the introduction of cohesive sediment, we directly incorporate key effects of vegetation on flow and sediment transport into the delta-building model DeltaRCM to explore how these effects influence delta channel network formation. Model development is informed by laboratory flume experiments at UT Austin. Here we present initial results of experiments exploring the effects of sea level rise rate, sediment grain size, vegetation type, and vegetation growth rate on delta channel network morphology. These results support the hypothesis that the ability for lateral transport of sediment to occur plays a key role in determining the evolution of delta channel networks and delta morphology.
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Next generation dynamic global vegetation models: learning from community ecology (Invited)
NASA Astrophysics Data System (ADS)
Scheiter, S.; Higgins, S.; Langan, L.
2013-12-01
Dynamic global vegetation models are a powerful tool to project past, current and future vegetation patterns and the associated biogeochemical cycles. However, most models are limited by their representation of vegetation by using static and pre-defined plant functional types and by their simplistic representation of competition. We discuss how concepts from community assembly theory and coexistence theory can help to improve dynamic vegetation models. We present a trait- and individual-based dynamic vegetation model, the aDGVM2, that allows individual plants to adopt a unique combination of trait values. These traits define how individual plants grow, compete and reproduce under the given biotic and abiotic conditions. A genetic optimization algorithm is used to simulate trait inheritance and reproductive isolation between individuals. These model properties allow the assembly of plant communities that are adapted to biotic and abiotic conditions. We show (1) that the aDGVM2 can simulate coarse vegetation patterns in Africa, (2) that changes in the environmental conditions and disturbances strongly influence trait diversity and the assembled plant communities by influencing traits such as leaf phenology and carbon allocation patterns of individual plants and (3) that communities do not necessarily return to the initial state when environmental conditions return to the initial state. The aDGVM2 deals with functional diversity and competition fundamentally differently from current models and allows novel insights as to how vegetation may respond to climate change. We believe that the aDGVM2 approach could foster collaborations between research communities that focus on functional plant ecology, plant competition, plant physiology and Earth system science.
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Relating salt marsh pore water geochemistry patterns to vegetation zones and hydrologic influences
NASA Astrophysics Data System (ADS)
Moffett, Kevan B.; Gorelick, Steven M.
2016-03-01
Physical, chemical, and biological factors influence vegetation zonation in salt marshes and other wetlands, but connections among these factors could be better understood. If salt marsh vegetation and marsh pore water geochemistry coorganize, e.g., via continuous plant water uptake and persistently unsaturated sediments controlling vegetation zone-specific pore water geochemistry, this could complement known physical mechanisms of marsh self-organization. A high-resolution survey of pore water geochemistry was conducted among five salt marsh vegetation zones at the same intertidal elevation. Sampling transects were arrayed both parallel and perpendicular to tidal channels. Pore water geochemistry patterns were both horizontally differentiated, corresponding to vegetation zonation, and vertically differentiated, relating to root influences. The geochemical patterns across the site were less broadly related to marsh hydrology than to vegetation zonation. Mechanisms contributing to geochemical differentiation included: root-induced oxidation and nutrient (P) depletion, surface and creek-bank sediment flushing by rainfall or tides, evapotranspiration creating aerated pore space for partial sediment flushing in some areas while persistently saturated conditions hindered pore water renewal in others, and evapoconcentration of pore water solutes overall. The concentrated pore waters draining to the tidal creeks accounted for 41% of ebb tide solutes (median of 14 elements), including being a potentially toxic source of Ni but a slight sink for Zn, at least during the short, winter study period in southern San Francisco Bay. Heterogeneous vegetation effects on pore water geochemistry are not only significant locally within the marsh but may broadly influence marsh-estuary solute exchange and ecology.
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Jia, Duo; Wang, Cang Jiao; Mu, Shou Guo; Zhao, Hua
2017-06-18
The spatiotemporal dynamic patterns of vegetation in mining area are still unclear. This study utilized time series trajectory segmentation algorithm to fit Landsat NDVI time series which generated from fusion images at the most prosperous period of growth based on ESTARFM algorithm. Combining with the shape features of the fitted trajectory, this paper extracted five vegetation dynamic patterns including pre-disturbance type, continuous disturbance type, stabilization after disturbance type, stabilization between disturbance and recovery type, and recovery after disturbance type. The result indicated that recovery after disturbance type was the dominant vegetation change pattern among the five types of vegetation dynamic pattern, which accounted for 55.2% of the total number of pixels. The follows were stabilization after disturbance type and continuous disturbance type, accounting for 25.6% and 11.0%, respectively. The pre-disturbance type and stabilization between disturbance and recovery type accounted for 3.5% and 4.7%, respectively. Vegetation disturbance mainly occurred from 2004 to 2009 in Shengli mining area. The onset time of stable state was 2008 and the spatial locations mainlydistributed in open-pit stope and waste dump. The reco-very state mainly started since the year of 2008 and 2010, while the areas were small and mainly distributed at the periphery of open-pit stope and waste dump. Duration of disturbance was mainly 1 year. The duration of stable period usually sustained 7 years. The duration of recovery state of the type of stabilization between disturbances continued 2 to 5 years, while the type of recovery after disturbance often sustained 8 years.
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The global distribution of ecosystems in a world without fire.
Bond, W J; Woodward, F I; Midgley, G F
2005-02-01
This paper is the first global study of the extent to which fire determines global vegetation patterns by preventing ecosystems from achieving the potential height, biomass and dominant functional types expected under the ambient climate (climate potential). To determine climate potential, we simulated vegetation without fire using a dynamic global-vegetation model. Model results were tested against fire exclusion studies from different parts of the world. Simulated dominant growth forms and tree cover were compared with satellite-derived land- and tree-cover maps. Simulations were generally consistent with results of fire exclusion studies in southern Africa and elsewhere. Comparison of global 'fire off' simulations with landcover and treecover maps show that vast areas of humid C(4) grasslands and savannas, especially in South America and Africa, have the climate potential to form forests. These are the most frequently burnt ecosystems in the world. Without fire, closed forests would double from 27% to 56% of vegetated grid cells, mostly at the expense of C(4) plants but also of C(3) shrubs and grasses in cooler climates. C(4) grasses began spreading 6-8 Ma, long before human influence on fire regimes. Our results suggest that fire was a major factor in their spread into forested regions, splitting biotas into fire tolerant and intolerant taxa.
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Hydrogeomorphic processes drive vegetation establishment, and promote development of diverse wetland and riparian types associated with lotic ecosystems. The main objective of this study was to estimate the rate and pattern of vegetation development on bars tracked since 1936, a...
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Can ecological land classification increase the utility of vegetation monitoring data
USDA-ARS?s Scientific Manuscript database
Vegetation dynamics in rangelands and other ecosystems are known to be mediated by topoedaphic properties. Vegetation monitoring programs, however, often do not consider the impact of soils and other sources of landscape heterogeneity on the temporal patterns observed. Ecological sites (ES) comprise...
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Fruit and vegetable intake among older adults: a scoping review
Kadell, Andria R.
2013-01-01
Older adults are the fastest growing segment of the world population. Older adults are also at heightened risk of chronic conditions (such as diabetes, heart disease, and cancer) and specific geriatric conditions (such as cognitive impairment, frailty, and falls). Research studies have examined the relationship between fruit and vegetable intake and subsequent health outcomes and the correlates of fruit and vegetable intake in the U.S. population. However, relatively few studies have specifically examined health impacts and correlates of fruit and vegetable intake among older adults, who have unique biophysical and socioeconomic circumstances. Evidence is reviewed to (1) describe findings related to consumption and chronic, geriatric, and other health outcomes among older adults and (2) describe patterns in fruit and vegetable consumption among older adults and how these patterns vary within and among populations. This review addresses specific barriers faced by older adults in obtaining and consuming fruits and vegetables in community settings. Recommendations for practice and policy are discussed. PMID:23769545
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NASA Astrophysics Data System (ADS)
Cherrington, E. A.; Vincent, G.; Barbier, N.; Pélissier, R.; Sabatier, D.; Berger, U.
2017-12-01
In recent years, there has been controversy regarding applying vegetation indices (VIs) for monitoring tropical forests because of data artefacts related to sun-sensor geometry issues. One means of addressing the issue is comparing the VI variation of tropical forests in similar latitudes. That is, if intra-annual variation in VIs is not driven by real structural and biological changes in the vegetation, then one would expect that forests on the same latitudes should display similar patterns of VI variation. Data from multiple vegetation indices (from MODIS and SPOT VEGETATION) were analyzed over three ten degree by ten degree tiles covering the Guianas, western-central Africa, and northern Borneo in Southeast Asia. In addition to comparing the intra-annual trends across the three regions, the trends were also compared with intra-annual patterns of temporal variation, to see if these explained the VI variation. Those analyses showed that not only did the VI variation across the three regions differ significantly, but the patterns in VI variation for at least two of the three regions were largely correlated with intra-annual variation in environmental factors such as rainfall or light availability. For the Guianas, the pattern of VI variation was largely correlated with the variation in solar radiation, while for western-central Africa, the pattern of variation was more correlated to the variation in rainfall. In contrast, for northern Borneo, the pattern of VI variation did not correlate well with either variation in solar elevation or with intra-annual variation in environmental factors. Firstly, the data would seem to suggest that the patterns of variation in VI data for tropical forests are not strongly biased by artefacts related to sun-sensor geometry effects. More importantly, however, the results also suggest that the phenological of forests in both the Guianas and in western-central Africa are governed by different environmental regimes. That is to say, the forests in the Guianas appear to be light-limited, whereas in contrast, the forests in western-central Africa appear to be moisture-limited. This research suggests that vegetation index data - when corrected for artefacts related to bi-directional effects - can indeed be used to study patterns of temporal variation of forests in the tropics.
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The Ecohydrologic Role of Coexistence and Competition in Semiarid Hillslopes
NASA Astrophysics Data System (ADS)
Soltanjalili, M. J.; Saco, P. M.; Willgoose, G. R.
2015-12-01
Through its influence on runoff and erosion-deposition processes, vegetation remarkably regulates different aspects of landscape dynamics. Here, the influence of different plant functional traits on the coexistence of different species in arid and semi-arid regions with patchy vegetation is investigated using an ecohydrology model. The model simulates coevolving changes in biomass patterns for two species, as well as overland flow and soil moisture dynamics. Vegetation patterns emerge as a result of facilitation (shading and infiltration) and competition mechanisms as well as varying seed dispersal strategies. The results show that the survival of only one species or the coexistence of both species not only strongly depends on environmental stresses, but also on differences in hillslope micro and macro topography. These vegetation patterns have very different hydrologic signatures and the potential to trigger remarkably different geomorphic responses. Based on these results we establish new hypothesis that will be used to further investigate the role of plant interspecific and intraspecific feedbacks on landscape coevolution processes.
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Maximum entropy production allows a simple representation of heterogeneity in semiarid ecosystems.
Schymanski, Stanislaus J; Kleidon, Axel; Stieglitz, Marc; Narula, Jatin
2010-05-12
Feedbacks between water use, biomass and infiltration capacity in semiarid ecosystems have been shown to lead to the spontaneous formation of vegetation patterns in a simple model. The formation of patterns permits the maintenance of larger overall biomass at low rainfall rates compared with homogeneous vegetation. This results in a bias of models run at larger scales neglecting subgrid-scale variability. In the present study, we investigate the question whether subgrid-scale heterogeneity can be parameterized as the outcome of optimal partitioning between bare soil and vegetated area. We find that a two-box model reproduces the time-averaged biomass of the patterns emerging in a 100 x 100 grid model if the vegetated fraction is optimized for maximum entropy production (MEP). This suggests that the proposed optimality-based representation of subgrid-scale heterogeneity may be generally applicable to different systems and at different scales. The implications for our understanding of self-organized behaviour and its modelling are discussed.
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Wang, Xiao-Li; Chang, Yu; Chen, Hong-Wei; Hu, Yuan-Man; Jiao, Lin-Lin; Feng, Yu-Ting; Wu, Wen; Wu, Hai-Feng
2014-04-01
Based on field inventory data and vegetation index EVI (enhanced vegetation index), the spatial pattern of the forest biomass in the Great Xing'an Mountains, Heilongjiang Province was quantitatively analyzed. Using the spatial analysis and statistics tools in ArcGIS software, the impacts of climatic zone, elevation, slope, aspect and vegetation type on the spatial pattern of forest biomass were explored. The results showed that the forest biomass in the Great Xing'an Mountains was 350 Tg and spatially aggregated with great increasing potentials. Forest biomass density in the cold temperate humid zone (64.02 t x hm(-2)) was higher than that in the temperate humid zone (60.26 t x hm(-2)). The biomass density of each vegetation type was in the order of mixed coniferous forest (65.13 t x hm(-2)) > spruce-fir forest (63.92 t x hm(-2)) > Pinus pumila-Larix gmelinii forest (63.79 t x hm(-2)) > Pinus sylvestris var. mongolica forest (61.97 t x hm(-2)) > Larix gmelinii forest (61.40 t x hm(-2)) > deciduous broadleaf forest (58.96 t x hm(-2)). With the increasing elevation and slope, the forest biomass density first decreased and then increased. The forest biomass density in the shady slopes was greater than that in the sunny slopes. The spatial pattern of forest biomass in the Great Xing' an Mountains exhibited a heterogeneous pattern due to the variation of climatic zone, vegetation type and topographical factor. This spatial heterogeneity needs to be accounted when evaluating forest biomass at regional scales.
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Holland, L.E.; Huston, M.L.
1984-01-01
The association of young-of-the-year northern pike (Esox lucius) with different aquatic plant types (e.g., submerged, emergent, floating) was studied to evaluate the impacts of a potential loss of backwaters on available fish nursery habitats in the upper Mississippi River. Eight biweekly collections were made at each of six representative lentic habitats in Navigation Pool 7. In the spring, average catches of northern pike from areas with submerged vegetation were nearly three times greater than from areas with emergent vegetation, and more than 10 times greater than from an area with no vegetation. This pattern was consistent until late summer, when the young became more common in the more highly oxygenated, less heavily vegetated waters. Food and growth were examined as possible indicators for the selection of areas with submerged vegetation over other habitats. Food varied among fish in the different vegetation types; however, no significant patterns of improved growth or condition were apparent. Young northern pike apparently were successful, opportunistic feeders. Although preference for habitats with submerged vegetation was seemingly not related to food, the overall production of young was clearly best in these habitats.
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Controls on desert dune activity - a geospatial approach
NASA Astrophysics Data System (ADS)
Lancaster, N.; Hesse, P. P.
2017-12-01
Desert and other inland dunes occur on a wide spectrum of activity (defined loosely as the proportion of the surface area subject to sand movement) from unvegetated to sparsely vegetated "active" dunes through discontinuously vegetated inactive dunes to completely vegetated and degraded dunes. Many of the latter are relicts of past climatic conditions. Although field studies and modeling of the interactions between winds, vegetation cover, and dune activity can provide valuable insights, the response of dune systems to climate change and variability past, present, and future has until now been hampered by the lack of pertinent observational data on geomorphic and climatic boundary conditions and dune activity status for most dune areas. We have developed GIS-based approach that permits analysis of boundary conditions and controls on dune activity at a range of spatial scales from dunefield to global. In this approach, the digital mapping of dune field and sand sea extent has been combined with systematic observations of dune activity at 0.2° intervals from high resolution satellite image data, resulting in four classes of activity. 1 km resolution global gridded datasets for the aridity index (AI); precipitation, satellite-derived percent vegetation cover; and estimates of sand transport potential (DP) were re-sampled for each 0.2° grid cell, and dune activity was compared to vegetation cover, sand transport potential, precipitation, and the aridity index. Results so far indicate that there are broad-scale relationships between dunefield mean activity, climate, and vegetation cover. However, the scatter in the data suggest that other local factors may be at work. Intra-dune field patterns are complex in many cases. Overall, much more work needs to be done to gain a full understanding of controls at different spatial and temporal scales, which can be faciliated by this spatial database.
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Speksnijder, J E; Mulder, M M; Dohmen, M R; Hage, W J; Bluemink, J G
1985-03-01
Using freeze-fracture electron microscopy, the numerical particle distribution in the fertilized Nassarius egg plasma membrane has been analyzed in four areas at different positions along the animal-vegetal axis of the egg. These areas can be distinguished by distinct microvilli patterns and differences in microvilli densities. In all areas, more IMPs (intramembrane particles) are present on the P face than on the corresponding E face. The ratio of the number of IMPs present on E and P face is similar in all areas (0.48-0.55) except for the most animal part of the vegetal hemisphere, where relatively more IMPs remain attached to the exterior half of the fractured membrane (E/P ratio = 0.88). The IMP density at the vegetal pole of the egg is considerably higher than in the animal hemisphere and in the animal part of the vegetal hemisphere. This difference is due to an increased number of IMPs in all size classes (4-18 nm). In the area adjacent to the vegetal pole the density of particles is also higher than in the two more animal areas, but here the difference is exclusively due to the smaller IMP size classes (4-8 nm). Statistical analysis of our data reveals that the area adjacent to the vegetal pole patch is significantly different from the other areas with respect to the distribution of the IMPs over the different IMP size classes. These results demonstrate the polar organization of the Nassarius egg plasma membrane. The possible role of this surface heterogeneity in the spatial organization of the egg cell and the later embryo is discussed.
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Treitler, Julia Tabea; Drissen, Tim; Stadtmann, Robin; Zerbe, Stefan; Mantilla-Contreras, Jasmin
2017-12-19
Endozoochory is, in grazing systems, a substantial vector for seed dispersal. It can play an important role in vegetation dynamics, especially in colonization processes through seed input on the vegetation and on the soil seed bank. We investigated the endozoochorous seed input of donkeys and goats on a semi-natural island ecosystem in the Mediterranean. Through germination experiments, we assessed the viable seed content of the dung of these grazing animals to estimate their suitability and efficiency for seed dispersal of the vegetation types of the island. We show different dispersal patterns of donkeys and goats. Goats disperse a high number of diaspores from shrubs while donkeys disperse more diaspores of grasses. In addition, goats disperse plants of greater growth height and donkeys plants of shorter height. These dispersal patterns are in accordance with the vegetation types of which donkeys and goats disperse indicator species. Both, donkeys and goats, feed on and disperse species of the vegetation types, open grassland and temporarily wet grassland. In addition, goats feed on and disperse diagnostic species of the semi-open maquis and preforest formations. Overall, our results show that donkeys and goats are complementing each other in their endozoochorous seed dispersal potential. This emphasizes the importance of both grazing animals for the vegetation dynamics of the semi-natural island ecosystem. Therefore, the adaption of the goat management to a traditional land management based on directed transhumance might maintain and enrich vegetation types.
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Fruit and Vegetable Intake and Dietary Patterns of Preadolescents Attending Schools in the Midwest
ERIC Educational Resources Information Center
Nepper, Martha J.; Chai, Weiwen
2015-01-01
Objectives: The present study examined dietary intake of fruit and vegetables and dietary patterns of preadolescents attending schools in the Midwest. Methods: A total of 506 students (11.2 ± 1.3 years) from four public and private schools in Nebraska completed a validated 41-item Food Frequency Questionnaire to assess their dietary intake.…
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Submersed Aquatic Vegetation Modeling Output Online
Yin, Yao; Rogala, Jim; Sullivan, John; Rohweder, Jason J.
2005-01-01
Introduction The ability to predict the distribution of submersed aquatic vegetation in the Upper Mississippi River on the basis of physical or chemical variables is useful to resource managers. Wildlife managers have a keen interest in advanced estimates of food quantity such as American wildcelery (Vallisneria americana) population status to give out more informed advisories to hunters before the fall hunting season. Predictions for distribution of submerged aquatic vegetation beds can potentially increase hunter observance of voluntary avoidance zones where foraging birds are left alone to feed undisturbed. In years when submersed aquatic vegetation is predicted to be scarce in important wildlife habitats, managers can get the message out to hunters well before the hunting season (Jim Nissen, Upper Mississippi River National Wildlife and Fish Refuge, La Crosse District Manager, La Crosse, Wisconsin, personal communication). We developed a statistical model to predict the probability of occurrence of submersed aquatic vegetation in Pool 8 of the Upper Mississippi River on the basis of a few hydrological, physical, and geomorphic variables. Our model takes into consideration flow velocity, wind fetch, bathymetry, growing-season daily water level, and light extinction coefficient in the river (fig. 1) and calculates the probability of submersed aquatic vegetation existence in Pool 8 in individual 5- x 5-m grid cells. The model was calibrated using the data collected in 1998 (516 sites), 1999 (595 sites), and 2000 (649 sites) using a stratified random sampling protocol (Yin and others, 2000b). To validate the model, we chose the data from the Long Term Resource Monitoring Program (LTRMP) transect sampling in backwater areas (Rogers and Owens 1995; Yin and others, 2000a) and ran the model for each 5- x 5-m grid cell in every growing season from 1991 to 2001. We tallied all the cells and came up with an annual average percent frequency of submersed aquatic vegetation occurrence and compared the results with actual LTRMP survey data (fig. 2). Both a paired Student's test (P = 0.4620) and a Wilcoxon's two-sample test (P = 0.4738) did not contradict our null hypothesis that the model prediction and the sampling data are statistically the same. We have not found an effective statistical test to compare model-predicted spatial pattern with aerial photography geographic information, but we are satisfied with the model's outcome on the basis of visual inspection (fig. 3). A unique feature about this model is that a prediction can be made by the end of June each year; therefore, providing wildlife managers an assessment of current year vegetation growth condition 3 to 4 months ahead of the arrival of migrating waterfowl that feed on submersed aquatic vegetation. We are working with the LTRMP partnership to create a mechanism so that model predictions (fig. 4) can be updated annually and the results posted on the LTRMP Web site. Our model underestimated the prevalence of vegetation from 2001 to 2004. We speculate that the summer water level reduction conducted in 2001 and 2002 triggered vegetation responses that are outside the model's domain. Future enhancement of the model will incorporate the summer water level drawdown effects as well as the effects of growth conditions in previous years.
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Analysis of Alaskan burn severity patterns using remotely sensed data
Duffy, P.A.; Epting, J.; Graham, J.M.; Rupp, T.S.; McGuire, A.D.
2007-01-01
Wildland fire is the dominant large-scale disturbance mechanism in the Alaskan boreal forest, and it strongly influences forest structure and function. In this research, patterns of burn severity in the Alaskan boreal forest are characterised using 24 fires. First, the relationship between burn severity and area burned is quantified using a linear regression. Second, the spatial correlation of burn severity as a function of topography is modelled using a variogram analysis. Finally, the relationship between vegetation type and spatial patterns of burn severity is quantified using linear models where variograms account for spatial correlation. These results show that: 1) average burn severity increases with the natural logarithm of the area of the wildfire, 2) burn severity is more variable in topographically complex landscapes than in flat landscapes, and 3) there is a significant relationship between burn severity and vegetation type in flat landscapes but not in topographically complex landscapes. These results strengthen the argument that differential flammability of vegetation exists in some boreal landscapes of Alaska. Additionally, these results suggest that through feedbacks between vegetation and burn severity, the distribution of forest vegetation through time is likely more stable in flat terrain than it is in areas with more complex topography. ?? IAWF 2007.
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Villarreal, Miguel L.; Norman, Laura M.; Webb, Robert H.; Turner, Raymond M.
2013-01-01
Vegetation and land-cover changes are not always directional but follow complex trajectories over space and time, driven by changing anthropogenic and abiotic conditions. We present a multi-observational approach to land-change analysis that addresses the complex geographic and temporal variability of vegetation changes related to climate and land use. Using land-ownership data as a proxy for land-use practices, multitemporal land-cover maps, and repeat photography dating to the late 19th century, we examine changing spatial and temporal distributions of two vegetation types with high conservation value in the southwestern United States: grasslands and riparian vegetation. In contrast to many reported vegetation changes, notably shrub encroachment in desert grasslands, we found an overall increase in grassland area and decline of xeroriparian and riparian vegetation. These observed change patterns were neither temporally directional nor spatially uniform over the landscape. Historical data suggest that long-term vegetation changes coincide with broad climate fluctuations while fine-scale patterns are determined by land-management practices. In some cases, restoration and active management appear to weaken the effects of climate on vegetation; therefore, if land managers in this region act in accord with on-going directional changes, the current drought and associated ecological reorganization may provide an opportunity to achieve desired restoration endpoints.
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Modest validity and fair reproducibility of dietary patterns derived by cluster analysis.
Funtikova, Anna N; Benítez-Arciniega, Alejandra A; Fitó, Montserrat; Schröder, Helmut
2015-03-01
Cluster analysis is widely used to analyze dietary patterns. We aimed to analyze the validity and reproducibility of the dietary patterns defined by cluster analysis derived from a food frequency questionnaire (FFQ). We hypothesized that the dietary patterns derived by cluster analysis have fair to modest reproducibility and validity. Dietary data were collected from 107 individuals from population-based survey, by an FFQ at baseline (FFQ1) and after 1 year (FFQ2), and by twelve 24-hour dietary recalls (24-HDR). Repeatability and validity were measured by comparing clusters obtained by the FFQ1 and FFQ2 and by the FFQ2 and 24-HDR (reference method), respectively. Cluster analysis identified a "fruits & vegetables" and a "meat" pattern in each dietary data source. Cluster membership was concordant for 66.7% of participants in FFQ1 and FFQ2 (reproducibility), and for 67.0% in FFQ2 and 24-HDR (validity). Spearman correlation analysis showed reasonable reproducibility, especially in the "fruits & vegetables" pattern, and lower validity also especially in the "fruits & vegetables" pattern. κ statistic revealed a fair validity and reproducibility of clusters. Our findings indicate a reasonable reproducibility and fair to modest validity of dietary patterns derived by cluster analysis. Copyright © 2015 Elsevier Inc. All rights reserved.
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Marshall, Eleanor; Costa, Liliana M; Gutierrez-Marcos, Jose
2011-03-01
Cell-cell communication in plants is essential for the correct co-ordination of reproduction, growth, and development. Studies to dissect this mode of communication have previously focussed primarily on the action of plant hormones as mediators of intercellular signalling. In animals, peptide signalling is a well-documented intercellular communication system, however, relatively little is known about this system in plants. In recent years, numerous reports have emerged about small, secreted peptides controlling different aspects of plant reproduction. Interestingly, most of these peptides are cysteine-rich, and there is convincing evidence suggesting multiple roles for related cysteine-rich peptides (CRPs) as signalling factors in developmental patterning as well as during plant pathogen responses and symbiosis. In this review, we discuss how CRPs are emerging as key signalling factors in regulating multiple aspects of vegetative growth and reproductive development in plants.
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Gordon, Christopher E; Price, Owen F; Tasker, Elizabeth M
2017-07-01
There is a public perception that large high-severity wildfires decrease biodiversity and increase fire hazard by homogenizing vegetation composition and increasing the cover of mid-story vegetation. But a growing literature suggests that vegetation responses are nuanced. LiDAR technology provides a promising remote sensing tool to test hypotheses about post-fire vegetation regrowth because vegetation cover can be quantified within different height strata at fine scales over large areas. We assess the usefulness of airborne LiDAR data for measuring post-fire mid-story vegetation regrowth over a range of spatial resolutions (10 × 10 m, 30 × 30 m, 50 × 50 m, 100 × 100 m cell size) and investigate the effect of fire severity on regrowth amount and spatial pattern following a mixed severity wildfire in Warrumbungle National Park, Australia. We predicted that recovery would be more vigorous in areas of high fire severity, because park managers observed dense post-fire regrowth in these areas. Moderate to strong positive associations were observed between LiDAR and field surveys of mid-story vegetation cover between 0.5-3.0 m. Thus our LiDAR survey was an apt representation of on-ground vegetation cover. LiDAR-derived mid-story vegetation cover was 22-40% lower in areas of low and moderate than high fire severity. Linear mixed-effects models showed that fire severity was among the strongest biophysical predictors of mid-story vegetation cover irrespective of spatial resolution. However much of the variance associated with these models was unexplained, presumably because soil seed banks varied at finer scales than our LiDAR maps. Dense patches of mid-story vegetation regrowth were small (median size 0.01 ha) and evenly distributed between areas of low, moderate and high fire severity, demonstrating that high-severity fires do not homogenize vegetation cover. Our results are relevant for ecosystem conservation and fire management because they: indicate that native vegetation are responsive and resilient to high-severity fire, and show the usefulness of remote sensing tools such as LiDAR to monitor post-fire vegetation recovery over large areas in situ. © 2017 by the Ecological Society of America.
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Ingression-type cell migration drives vegetal endoderm internalisation in the Xenopus gastrula
Wen, Jason WH
2017-01-01
During amphibian gastrulation, presumptive endoderm is internalised as part of vegetal rotation, a large-scale movement that encompasses the whole vegetal half of the embryo. It has been considered a gastrulation process unique to amphibians, but we show that at the cell level, endoderm internalisation exhibits characteristics reminiscent of bottle cell formation and ingression, known mechanisms of germ layer internalisation. During ingression proper, cells leave a single-layered epithelium. In vegetal rotation, the process occurs in a multilayered cell mass; we refer to it as ingression-type cell migration. Endoderm cells move by amoeboid shape changes, but in contrast to other instances of amoeboid migration, trailing edge retraction involves ephrinB1-dependent macropinocytosis and trans-endocytosis. Moreover, although cells are separated by wide gaps, they are connected by filiform protrusions, and their migration depends on C-cadherin and the matrix protein fibronectin. Cells move in the same direction but at different velocities, to rearrange by differential migration. PMID:28826499
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Shafer, Sarah L; Bartlein, Patrick J; Gray, Elizabeth M; Pelltier, Richard T
2015-01-01
Future climate change may significantly alter the distributions of many plant taxa. The effects of climate change may be particularly large in mountainous regions where climate can vary significantly with elevation. Understanding potential future vegetation changes in these regions requires methods that can resolve vegetation responses to climate change at fine spatial resolutions. We used LPJ, a dynamic global vegetation model, to assess potential future vegetation changes for a large topographically complex area of the northwest United States and southwest Canada (38.0-58.0°N latitude by 136.6-103.0°W longitude). LPJ is a process-based vegetation model that mechanistically simulates the effect of changing climate and atmospheric CO2 concentrations on vegetation. It was developed and has been mostly applied at spatial resolutions of 10-minutes or coarser. In this study, we used LPJ at a 30-second (~1-km) spatial resolution to simulate potential vegetation changes for 2070-2099. LPJ was run using downscaled future climate simulations from five coupled atmosphere-ocean general circulation models (CCSM3, CGCM3.1(T47), GISS-ER, MIROC3.2(medres), UKMO-HadCM3) produced using the A2 greenhouse gases emissions scenario. Under projected future climate and atmospheric CO2 concentrations, the simulated vegetation changes result in the contraction of alpine, shrub-steppe, and xeric shrub vegetation across the study area and the expansion of woodland and forest vegetation. Large areas of maritime cool forest and cold forest are simulated to persist under projected future conditions. The fine spatial-scale vegetation simulations resolve patterns of vegetation change that are not visible at coarser resolutions and these fine-scale patterns are particularly important for understanding potential future vegetation changes in topographically complex areas.
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Hydrogeomorphic processes drive riparian vegetation establishment, growth, and longevity. The stage of vegetation development (e.g. age, composition, height, density) affects its degree of functionality with respect to hydrology, nutrient cycling, and terrestrial and aquatic hab...
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Chapter 7 - Mapping potential vegetation type for the LANDFIRE Prototype Project
Tracey S. Frescino; Matthew G. Rollins
2006-01-01
Mapped potential vegetation functioned as a key component in the Landscape Fire and Resource Management Planning Tools Prototype Project (LANDFIRE Prototype Project). Disturbance regimes, vegetation response and succession, and wildland fuel dynamics across landscapes are controlled by patterns of the environmental factors (biophysical settings) that entrain the...
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Ras proteins have multiple functions in vegetative cells of Dictyostelium.
Bolourani, Parvin; Spiegelman, George; Weeks, Gerald
2010-11-01
During the aggregation of Dictyostelium cells, signaling through RasG is more important in regulating cyclic AMP (cAMP) chemotaxis, whereas signaling through RasC is more important in regulating the cAMP relay. However, RasC is capable of substituting for RasG for chemotaxis, since rasG⁻ cells are only partially deficient in chemotaxis, whereas rasC⁻/rasG⁻ cells are totally incapable of chemotaxis. In this study we have examined the possible functional overlap between RasG and RasC in vegetative cells by comparing the vegetative cell properties of rasG⁻, rasC⁻, and rasC⁻/rasG⁻ cells. In addition, since RasD, a protein not normally found in vegetative cells, is expressed in vegetative rasG⁻ and rasC⁻/rasG⁻ cells and appears to partially compensate for the absence of RasG, we have also examined the possible functional overlap between RasG and RasD by comparing the properties of rasG⁻ and rasC⁻/rasG⁻ cells with those of the mutant cells expressing higher levels of RasD. The results of these two lines of investigation show that RasD is capable of totally substituting for RasG for cytokinesis and growth in suspension, whereas RasC is without effect. In contrast, for chemotaxis to folate, RasC is capable of partially substituting for RasG, but RasD is totally without effect. Finally, neither RasC nor RasD is able to substitute for the role that RasG plays in regulating actin distribution and random motility. These specificity studies therefore delineate three distinct and none-overlapping functions for RasG in vegetative cells.
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Taehee Hwang; James M. Vose; Christina Tague
2012-01-01
Lateral water flow in catchments can produce important patterns in water and nutrient fluxes and stores and also influences the long-term spatial development of forest ecosystems. Specifically, patterns of vegetation type and density along hydrologic flow paths can represent a signal of the redistribution of water and nitrogen mediated by lateral hydrologic flow. This...
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Can landscape memory affect vegetation recovery in drylands?
NASA Astrophysics Data System (ADS)
Baartman, Jantiene; Garcia Mayor, Angeles; Temme, Arnaud; Rietkerk, Max
2016-04-01
Dryland ecosystems are water-limited and therefore vegetation typically forms banded or patchy patterns with high vegetation cover, interspersed with bare soil areas. In these systems, a runoff-runon system is often observed with bare areas acting as sources and vegetation patches acting as sinks of water, sediment and other transported substances. These fragile ecosystems are easily disturbed by overgrazing, removing above-ground vegetation. To avoid desertification, vegetation recovery after a disturbance is crucial. This poster discusses the potential of 'landscape memory' to affect the vegetation recovery potential. Landscape memory, originating in geomorphology, is the concept that a landscape is the result of its past history, which it 'remembers' through imprints left in the landscape. For example, a past heavy rainstorm may leave an erosion gully. These imprints affect the landscape's contemporary functioning, for example through faster removal of water from the landscape. In dryland ecosystems vegetation is known to affect the soil properties of the soil they grow in, e.g. increasing porosity, infiltration, organic matter content and soil structure. After a disturbance of the banded ecosystem, e.g. by overgrazing, this pattern of soil properties - favourable for regrowth, stays in the landscape. However, removal of the above-ground vegetation also leads to longer runoff pathways and increased rill and gully erosion, which may hamper vegetation regrowth. I hypothesize that vegetation recovery after a disturbance, depends on the balance between these two contrasting types of landscape memory (i.e. favourable soil properties and erosion rills/gullies).
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Floodplain-wide coupling of flooding and vegetation patterns in the Tonle Sap of the Mekong River
NASA Astrophysics Data System (ADS)
Arias, M. E.; Haberstroh, C.
2017-12-01
Floodplain vegetation is one of the prime drivers of ecosystem productivity, thus floodplain-wide monitoring is critical to ensure the well-being of these ecosystems and the important services they provide to riparian societies. Therefore, the objective of this presentation is to introduce a novel methodology to monitor long-term and large-scale patterns of rooted vegetation in seasonally inundated floodplains. We applied this methodology to an floodplain area of ac. 18,000 km2 in the Tonle Sap (Cambodia), a complex hydro-ecological system directly connected to the Mekong River. The overall hypothesis of this study is that floodplain vegetation condition is dictated by gradients of disturbance from the uplands and from the flood-pulse itself. We first demonstrate that spatial vegetation patterns represented by the normalized difference vegetation index (NDVI) during the dry season -when interference from cloud cover and partial inundation is minimal- correspond well to meaningful land use/land cover groups as well as canopy cover data collected in the field. Annual trends (2000-2016) in NDVI spatial distribution showed that the modality of dry season NDVI is largely governed by the magnitude of flooding in the antecedent hydrological year. Indeed, we found a significant relationship between flood duration -defined as the number of months annually a floodplain pixel remains flooded- and floodplain-wide NDVI. We also determined that ac. 115 km2 yr-1 of the highest quality vegetation, were replaced by fallow land during the period of study. This research has important insights on the main drivers of floodplain vegetation in the Tonle Sap, and the proposed methodology, using data from freely available worldwide satellite imagery (MODIS), promises to be an effective method to monitor ecosystem change in large floodplains across the world.
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NASA Astrophysics Data System (ADS)
Ma, X.; Huete, A.; Yu, Q.; Davies, K.; Coupe, N. R.
2012-07-01
Phenology is receiving increasing interest in the area of climate change and vegetation adaptation to climate. The phenology of a landscape can be used as a key parameter in land surface models and dynamic global vegetation models to more accurately simulate carbon, water and energy exchanges between land cover and atmosphere. However, the characterisation of phenology is lacking in tropical savannas which cover more than 30% of global land area, and are highly vulnerable to climate change. The objective of this study is to investigate the spatial pattern of vegetation phenology along the Northern Australia Tropical Transect (NATT) where the major biomes are wet and dry tropical savannas. For this analysis we used more than 11 years Moderate Resolution Imaging Spectroradiometer (MODIS) Enhanced Vegetation Index (EVI) product from 2000 to 2011. Eight phenological metrics were derived: Start of Season (SOS), End of Season (EOS), Length of Season (LOS), Maximum EVI (MaxG), Minimum EVI (MinG), annual amplitude (AMP), large integral (LIG), and small integral (SIG) were generated for each year and each pixel. Our results showed there are significant spatial patterns and considerable interannual variations of vegetation phenology along the NATT study area. Generally speaking, vegetation growing season started and ended earlier in the north, and started and ended later in the south, resulting in a southward decrease of growing season length (LOS). Vegetation productivity, which was represented by annual integral EVI (LIG), showed a significant descending trend from the northern part of NATT to the southern part. Segmented regression analysis showed that there exists a distinguishable breakpoint along the latitudinal gradient, at least in terms of annual minimum EVI (EVI), which is located between 18.84°S to 20.04°S.
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NASA Astrophysics Data System (ADS)
A, G.; Velicogna, I.; Kimball, J. S.; Du, J.; Kim, Y.; Njoku, E. G.; Colliander, A.
2016-12-01
We combine soil moisture (SM) data from AMSR-E, AMSR-2 and SMAP, terrestrial water storage (TWS) changes from GRACE and precipitation measurements from GPCP to delineate and characterize drought and water supply pattern and its impact on vegetation growth. GRACE TWS provides spatially continuous observations of total terrestrial water storage changes and regional drought extent, persistence and severity, while satellite derived soil moisture estimates provide enhanced delineation of plant-available soil moisture. Together these data provide complementary metrics quantifying available plant water supply and have important implications for water resource management. We use these data to investigate the supply changes from different water components in relation to satellite based vegetation productivity metrics from MODIS, before, during and following the major drought events observed in the continental US during the past 13 years. We observe consistent trends and significant correlations between monthly time series of TWS, SM, and vegetation productivity. In Texas and surrounding semi-arid areas, we find that the spatial pattern of the vegetation-moisture relation follows the gradient in mean annual precipitation. In Texas, GRACE TWS and surface SM show strong coupling and similar characteristic time scale in relatively normal years, while during the 2011 onward hydrological drought, GRACE TWS manifests a longer time scale than that of surface SM, implying stronger drought persistence in deeper water storage. In the Missouri watershed, we find a spatially varying vegetation-moisture relationship where in the drier northwestern portion of the basin, the inter-annual variability in summer vegetation productivity is closely associated with changes in carry-on GRACE TWS from spring, whereas in the moist southeastern portion of the basin, summer precipitation is the dominant controlling factor on vegetation growth.
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Riediger, Natalie Diane; Shooshtari, Shahin; Moghadasian, Mohammed Hassan
2007-09-01
Poor dietary habits may increase risk for obesity and chronic diseases among Canadian adolescents. The aims of the present study were to: (a) establish the patterns of fruit and vegetable intake by Canadian adolescents, and (b) identify the impact of sociodemographic factors-including age, household income, household education, ethnicity, living arrangement, and location-on the pattern of fruit and vegetable intake in this population. This is a cross-sectional study using the data from the Canadian Community Health Survey, Cycle 2.1, Public Use File. The survey used questions similar to a food frequency questionnaire. Total fruit and vegetable intake of 18,524 Canadian adolescents (12 to 19 years old) was cross-tabulated between two age groups (12 to 14 years old [n=7,410] and 15 to 19 years old [n=11,114]) by sex, level of household education, total household income, ethnicity, living arrangement, and geographical location. The data revealed that a 38.3% of Canadian adolescents in this study consumed fruits and vegetables five to 10 times per day; fewer older adolescents (15- to 19-year-olds) reported eating fruits and vegetables at that frequency as compared with the younger subgroup (12- to 14-year-olds) (P<0.001). Household education and income independently had a significant (P<0.001) positive impact on fruit and vegetable consumption. Females reported a significantly (P<0.05) higher frequency of intake than did males. Adolescents living in homes with only one parent reported a significantly (P<0.005) lower frequency of intake, as compared with adolescents living with two parents. These results may help to identify adolescent groups at risk for poor eating habits and support the implementation of programs to encourage higher fruit and vegetable intakes.
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Costes, Evelyne; Crespel, Laurent; Denoyes, Béatrice; Morel, Philippe; Demene, Marie-Noëlle; Lauri, Pierre-Eric; Wenden, Bénédicte
2014-01-01
Branching in temperate plants is closely linked to bud fates, either floral or vegetative. Here, we review how the fate of meristematic tissues contained in buds and their position along a shoot imprint specific branching patterns which differ among species. Through examples chosen in closely related species in different genera of the Rosaceae family, a panorama of patterns is apparent. Patterns depend on whether vegetative and floral buds are borne individually or together in mixed buds, develop as the shoot grows or after a rest period, and are located in axillary or terminal positions along the parent shoot. The resulting branching patterns are conserved among varieties in a given species but progressively change with the parent shoot length during plant ontogeny. They can also be modulated by agronomic and environmental conditions. The existence of various organizations in the topology and fate of meristematic tissues and their appendages in closely related species questions the between-species conservation of physiological and molecular mechanisms leading to bud outgrowth vs. quiescence and to floral induction vs. vegetative development. PMID:25520729
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NASA Astrophysics Data System (ADS)
Zhang, Xiaoyang; Friedl, Mark A.; Schaaf, Crystal B.
2006-12-01
In the last two decades the availability of global remote sensing data sets has provided a new means of studying global patterns and dynamics in vegetation. The vast majority of previous work in this domain has used data from the Advanced Very High Resolution Radiometer, which until recently was the primary source of global land remote sensing data. In recent years, however, a number of new remote sensing data sources have become available that have significantly improved the capability of remote sensing to monitor global ecosystem dynamics. In this paper, we describe recent results using data from NASA's Moderate Resolution Imaging Spectroradiometer to study global vegetation phenology. Using a novel new method based on fitting piecewise logistic models to time series data from MODIS, key transition dates in the annual cycle(s) of vegetation growth can be estimated in an ecologically realistic fashion. Using this method we have produced global maps of seven phenological metrics at 1-km spatial resolution for all ecosystems exhibiting identifiable annual phenologies. These metrics include the date of year for (1) the onset of greenness increase (greenup), (2) the onset of greenness maximum (maturity), (3) the onset of greenness decrease (senescence), and (4) the onset of greenness minimum (dormancy). The three remaining metrics are the growing season minimum, maximum, and summation of the enhanced vegetation index derived from MODIS. Comparison of vegetation phenology retrieved from MODIS with in situ measurements shows that these metrics provide realistic estimates of the four transition dates identified above. More generally, the spatial distribution of phenological metrics estimated from MODIS data is qualitatively realistic, and exhibits strong correspondence with temperature patterns in mid- and high-latitude climates, with rainfall seasonality in seasonally dry climates, and with cropping patterns in agricultural areas.
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NASA Astrophysics Data System (ADS)
Pavlick, R.; Schimel, D.
2014-12-01
Dynamic Global Vegetation Models (DGVMs) typically employ only a small set of Plant Functional Types (PFTs) to represent the vast diversity of observed vegetation forms and functioning. There is growing evidence, however, that this abstraction may not adequately represent the observed variation in plant functional traits, which is thought to play an important role for many ecosystem functions and for ecosystem resilience to environmental change. The geographic distribution of PFTs in these models is also often based on empirical relationships between present-day climate and vegetation patterns. Projections of future climate change, however, point toward the possibility of novel regional climates, which could lead to no-analog vegetation compositions incompatible with the PFT paradigm. Here, we present results from the Jena Diversity-DGVM (JeDi-DGVM), a novel traits-based vegetation model, which simulates a large number of hypothetical plant growth strategies constrained by functional tradeoffs, thereby allowing for a more flexible temporal and spatial representation of the terrestrial biosphere. First, we compare simulated present-day geographical patterns of functional traits with empirical trait observations (in-situ and from airborne imaging spectroscopy). The observed trait patterns are then used to improve the tradeoff parameterizations of JeDi-DGVM. Finally, focusing primarily on the simulated leaf traits, we run the model with various amounts of trait diversity. We quantify the effects of these modeled biodiversity manipulations on simulated ecosystem fluxes and stocks for both present-day conditions and transient climate change scenarios. The simulation results reveal that the coarse treatment of plant functional traits by current PFT-based vegetation models may contribute substantial uncertainty regarding carbon-climate feedbacks. Further development of trait-based models and further investment in global in-situ and spectroscopic plant trait observations are needed.
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Vegetation ecogeomorphology, dynamic equilibrium, and disturbance: chapter 7
Hupp, Cliff R.
2013-01-01
Early ecologists understood the need to document geomorphic form and process to explain plant species distributions. Although this relationship has been acknowledged for over a century, with the exception of a few landmark papers, only the past few decades have experienced intensive research on this interdisciplinary topic. Here the authors provide a summary of the intimate relations between vegetation and geomorphic/process on hillslopes and fluvial systems. These relations are separated into systems (primarily fluvial) in dynamic equilibrium and those that are in nonequilibrium conditions including the impacts of various human disturbances affecting landforms, geomorphic processes, and interrelated, attendant vegetation patterns and processes. The authors conclude with a conceptual model of stream regime focusing on sediment deposition, erosion, and equilibrium that can be expanded to organize and predict vegetation patterns and life history strategies.
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NASA Astrophysics Data System (ADS)
Oliveira, Vanessa; Santos, Ana L.; Aguiar, Claúdia; Santos, Luisa; Salvador, Ângelo C.; Gomes, Newton C. M.; Silva, Helena; Rocha, Sílvia M.; Almeida, Adelaide; Cunha, Ângela
2012-09-01
The aim of this study was to investigate the influence of monospecific colonization of sediment stands by Spartina maritima or Halimione portulacoides on benthic prokaryote assemblages in a salt marsh located in Ria de Aveiro (Portugal). The distribution of Bacteria, Archaea and sulfate-reducing bacteria (SRB) in sediments with monospecific plant stands and in unvegetated sediments was characterized by Fluorescence In Situ Hybridization (FISH). Total prokaryote abundance (0.4 × 109-1.7 × 109 cells gdw-1) was highest in sediments from the surface layer. The domain Bacteria comprised approximately 40% of total prokaryote communities with the highest percentages occurring in the surface layer. Archaeal cells corresponded to an average of 25% of total prokaryote population, with higher abundance in the vegetation banks, and displaying homogeneous vertical distribution. The relative abundance of SRB represented approximately 3% of total 4', 6-diamidino-2-phenylindole dihydrochloride (DAPI) stained cells at unvegetated sediment and H. portulacoides stand and 7% at S. maritima stand. Headspace solid-phase microextraction (HS-SPME) combined with Comprehensive Two-Dimensional Gas Chromatography-Time-of-Flight Mass Spectrometry (GC × GC-ToFMS) was used to analyse the volatile and semi-volatile fraction of root exudates. A total of 171 compounds were identified and Principal Component Analysis showed a clear separation between the chemical composition (volatile and semi-volatile organic compounds) of the exudates of the two plants. The patterns of vertical distribution and differences in the proportion of SRB and Archaea in the prokaryote communities developing in sediments colonized by Spartina maritima or Halimione portulacoides suggest the existence of plant-specific interactions between halophyte vegetation and estuarine sediment bacteria in Ria de Aveiro salt marshes, exerted via sediment lithology and root-derived exudates.
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Oron, Y; Gillo, B; Gershengorn, M C
1988-06-01
Xenopus laevis oocytes are giant cells suitable for studies of plasma membrane receptors and signal transduction pathways because of their capacity to express receptors after injection of heterologous mRNA. We studied depolarizing chloride currents evoked by acetylcholine (AcCho) in native oocytes ("intrinsic AcCho response"), by thyrotropin-releasing hormone (TRH) in oocytes injected with pituitary (GH3) cell RNA ("acquired TRH response"), and by AcCho in oocytes injected with rat brain RNA ("acquired AcCho response"). We found differences in the latencies and patterns of these responses and in the responsiveness to these agonists when applied to the animal or vegetal hemisphere, even though all of the responses are mediated by the same signal transduction pathway. The common intrinsic response to AcCho is characterized by minimal latency (0.86 +/- 0.05 sec), a rapid, transient depolarization followed by a distinct prolonged depolarization, and larger responses obtained after AcCho application at the vegetal rather than the animal hemisphere. By contrast, the acquired responses to TRH and AcCho are characterized by much longer latencies, 9.3 +/- 1.0 and 5.5 +/- 0.8 sec, respectively, and large rapid depolarizations followed by less distinct prolonged depolarizations. The responsiveness on the two hemispheres to TRH and AcCho in mRNA-injected oocytes is opposite to that for the common intrinsic AcCho response in that there is a much greater response when agonist is applied at the animal rather than the vegetal hemisphere. We suggest that the differences in these responses are caused by differences in the intrinsic properties of these receptors. Because different receptors appear to be segregated in the same oocyte in distinct localizations, Xenopus oocytes may be an important model system in which to study receptor sorting in polarized cells.
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Chen, Huei-Mei; Rosebrock, Adam P.; Khan, Sohail R.; Futcher, Bruce; Leatherwood, Janet K.
2012-01-01
In S. pombe, about 5% of genes are meiosis-specific and accumulate little or no mRNA during vegetative growth. Here we use Affymetrix tiling arrays to characterize transcripts in vegetative and meiotic cells. In vegetative cells, many meiotic genes, especially those induced in mid-meiosis, have abundant antisense transcripts. Disruption of the antisense transcription of three of these mid-meiotic genes allowed vegetative sense transcription. These results suggest that antisense transcription represses sense transcription of meiotic genes in vegetative cells. Although the mechanism(s) of antisense mediated transcription repression need to be further explored, our data indicates that RNAi machinery is not required for repression. Previously, we and others used non-strand specific methods to study splicing regulation of meiotic genes and concluded that 28 mid-meiotic genes are spliced only in meiosis. We now demonstrate that the “unspliced” signal in vegetative cells comes from the antisense RNA, not from unspliced sense RNA, and we argue against the idea that splicing regulates these mid-meiotic genes. Most of these mid-meiotic genes are induced in mid-meiosis by the forkhead transcription factor Mei4. Interestingly, deletion of a different forkhead transcription factor, Fkh2, allows low levels of sense expression of some mid-meiotic genes in vegetative cells. We propose that vegetative expression of mid-meiotic genes is repressed at least two independent ways: antisense transcription and Fkh2 repression. PMID:22238674
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NASA Astrophysics Data System (ADS)
Farid, A.; Goodrich, D.; Sartori, M.; Sorooshian, S.
2003-12-01
Quantification of vegetation patterns and properties is needed to determine their role in the landscape and to develop management plans to conserve natural resources. Vegetation patterns can be mapped from the ground, or by using aerial photography or satellite imagery. However, quantifying the physical properties of vegetation patterns with ground-based or remote sensing technology is difficult, time consuming, and often costly. Digital data from an airborne lidar (light detecting and ranging) instrument offers an alternative method for quantifying vegetation properties and patterns. Using lidar, a study was conducted in the San Pedro National Riparian Conservation Area in an attempt to differentiate young and old Cottonwood trees in southeastern Arizona as young and old cottonwoods have significantly different water use per unit area of canopy. The lidar data was acquired in June 2003, using Optech's ALTM (Airborne Laser Terrain Mapper), during flyovers conducted at an altitude of 750 m. It has been demonstrated that the height of old and young cottonwood canopies can be measured by using lidar. Canopy heights measured with the lidar show a good degree of correlation with ground-based measurements. Methodologically, the first step required is to differentiate old from young cottonwood canopies by the differences in canopy height obtained from lidar data. In addition to vegetation heights, spatial patterns of crown area, canopy cover, and intensity of return laser pulse are measured for both old and young cottonwood trees with the lidar data. The second stage of this study demonstrates that these other parameters of old and young cottonwood trees, when extrapolated from lidar, are significantly different. This study indicates the potential of airborne lidar data to distinguish between different ages of cottonwood forest canopy for large areas quickly and quantitatively.
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Larsen, Laurel G.; Harvey, Judson W.
2011-01-01
In general, the stability of different wetland pattern types is most strongly related to factors controlling the erosion and deposition of sediment at vegetation patch edges, the magnitude of sediment redistribution by flow, patch elevation relative to water level, and the variability of erosion rates in vegetation patches with low flow-resistance. As we exemplify in our case-study of the Everglades ridge and slough landscape, feedback between flow and vegetation also causes hysteresis in landscape evolution trajectories that will affect the potential for landscape restoration. Namely, even if the hydrologic conditions that historically produced higher flows are restored, degraded portions of the ridge and slough landscape are unlikely to revert to their former patterning. As wetlands and floodplains worldwide become increasingly threatened by climate change and urbanization, the greater mechanistic understanding of landscape pattern and process that our analysis provides will improve our ability to forecast and manage the behavior of these ecosystems.
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NASA Technical Reports Server (NTRS)
Liu, Yi; van Dijk, Albert I.J.M.; Owe, Manfred
2007-01-01
Spatiotemporal patterns in soil moisture and vegetation water content across mainland Australia were investigated from 1998 through 2005, using TRMMITMI passive microwave observations. The Empirical Orthogonal Function technique was used to extract dominant spatial and temporal patterns in retrieved estimates of moisture content for the top 1-cm of soil (theta) and vegetation moisture content (via optical depth tau). The dominant temporal theta and tau patterns were strongly correlated to El Nino/Southern Oscillation (ENSO) in spring (3 = 0.90), and to a progressively lesser extent autumn, summer and winter. The Indian Ocean Dipole (IOD) index also explained part of the variation in spring 8 and z. Cluster analysis suggested that the regions most affected by ENS0 are mainly located in eastern Australia. The results suggest that the drought conditions experienced in eastern Australia since 2000 an clearly expressed in these satellite observations have a strong connection with ENSO patterns.
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McCue, Andrea D; Cresti, Mauro; Feijó, José A; Slotkin, R Keith
2011-03-01
The male germ cells of angiosperm plants are neither free-living nor flagellated and therefore are dependent on the unique structure of the pollen grain for fertilization. During angiosperm male gametogenesis, an asymmetric mitotic division produces the generative cell, which is completely enclosed within the cytoplasm of the larger pollen grain vegetative cell. Mitotic division of the generative cell generates two sperm cells that remain connected by a common extracellular matrix with potential intercellular connections. In addition, one sperm cell has a cytoplasmic projection in contact with the vegetative cell nucleus. The shared extracellular matrix of the two sperm cells and the physical association of one sperm cell to the vegetative cell nucleus forms a linkage of all the genetic material in the pollen grain, termed the male germ unit. Found in species representing both the monocot and eudicot lineages, the cytoplasmic projection is formed by vesicle formation and microtubule elongation shortly after the formation of the generative cell and tethers the male germ unit until just prior to fertilization. The cytoplasmic projection plays a structural role in linking the male germ unit, but potentially plays other important roles. Recently, it has been speculated that the cytoplasmic projection and the male germ unit may facilitate communication between the somatic vegetative cell nucleus and the germinal sperm cells, via RNA and/or protein transport. This review focuses on the nature of the sperm cell cytoplasmic projection and the potential communicative function of the male germ unit.
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Kent, Rafi; Michael, Yaron; Shnerb, Nadav M.
2017-01-01
The process of desertification in the semi-arid climatic zone is considered by many as a catastrophic regime shift, since the positive feedback of vegetation density on growth rates yields a system that admits alternative steady states. Some support to this idea comes from the analysis of static patterns, where peaks of the vegetation density histogram were associated with these alternative states. Here we present a large-scale empirical study of vegetation dynamics, aimed at identifying and quantifying directly the effects of positive feedback. To do that, we have analyzed vegetation density across 2.5 × 106 km2 of the African Sahel region, with spatial resolution of 30 × 30 meters, using three consecutive snapshots. The results are mixed. The local vegetation density (measured at a single pixel) moves towards the average of the corresponding rainfall line, indicating a purely negative feedback. On the other hand, the chance of spatial clusters (of many “green” pixels) to expand in the next census is growing with their size, suggesting some positive feedback. We show that these apparently contradicting results emerge naturally in a model with positive feedback and strong demographic stochasticity, a model that allows for a catastrophic shift only in a certain range of parameters. Static patterns, like the double peak in the histogram of vegetation density, are shown to vary between censuses, with no apparent correlation with the actual dynamical features. Our work emphasizes the importance of dynamic response patterns as indicators of the state of the system, while the usefulness of static modality features appears to be quite limited. PMID:29261678
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NASA Astrophysics Data System (ADS)
Dubovyk, Olena; Landmann, Tobias; Erasmus, Barend F. N.; Tewes, Andreas; Schellberg, Jürgen
2015-06-01
Currently there is a lack of knowledge on spatio-temporal patterns of land surface dynamics at medium spatial scale in southern Africa, even though this information is essential for better understanding of ecosystem response to climatic variability and human-induced land transformations. In this study, we analysed vegetation dynamics across a large area in southern Africa using the 14-years (2000-2013) of medium spatial resolution (250 m) MODIS-EVI time-series data. Specifically, we investigated temporal changes in the time series of key phenometrics including overall greenness, peak and timing of annual greenness over the monitoring period and study region. In order to specifically capture spatial and per pixel vegetation changes over time, we calculated trends in these phenometrics using a robust trend analysis method. The results showed that interannual vegetation dynamics followed precipitation patterns with clearly differentiated seasonality. The earliest peak greenness during 2000-2013 occurred at the end of January in the year 2000 and the latest peak greenness was observed at the mid of March in 2012. Specifically spatial patterns of long-term vegetation trends allowed mapping areas of (i) decrease or increase in overall greenness, (ii) decrease or increase of peak greenness, and (iii) shifts in timing of occurrence of peak greenness over the 14-year monitoring period. The observed vegetation decline in the study area was mainly attributed to human-induced factors. The obtained information is useful to guide selection of field sites for detailed vegetation studies and land rehabilitation interventions and serve as an input for a range of land surface models.
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Weissmann, Haim; Kent, Rafi; Michael, Yaron; Shnerb, Nadav M
2017-01-01
The process of desertification in the semi-arid climatic zone is considered by many as a catastrophic regime shift, since the positive feedback of vegetation density on growth rates yields a system that admits alternative steady states. Some support to this idea comes from the analysis of static patterns, where peaks of the vegetation density histogram were associated with these alternative states. Here we present a large-scale empirical study of vegetation dynamics, aimed at identifying and quantifying directly the effects of positive feedback. To do that, we have analyzed vegetation density across 2.5 × 106 km2 of the African Sahel region, with spatial resolution of 30 × 30 meters, using three consecutive snapshots. The results are mixed. The local vegetation density (measured at a single pixel) moves towards the average of the corresponding rainfall line, indicating a purely negative feedback. On the other hand, the chance of spatial clusters (of many "green" pixels) to expand in the next census is growing with their size, suggesting some positive feedback. We show that these apparently contradicting results emerge naturally in a model with positive feedback and strong demographic stochasticity, a model that allows for a catastrophic shift only in a certain range of parameters. Static patterns, like the double peak in the histogram of vegetation density, are shown to vary between censuses, with no apparent correlation with the actual dynamical features. Our work emphasizes the importance of dynamic response patterns as indicators of the state of the system, while the usefulness of static modality features appears to be quite limited.
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Lee, Shoo Thien; Ng, Swee Ai; Khouw, Ilse; Poh, Bee Koon
2017-01-01
This study aimed to assess fruit and vegetable intake patterns and their associations with sociodemographic characteristics, anthropometric status and nutrient intake profiles among Malaysian children aged 1–6 years. Using the Malaysian dataset of South East Asian Nutrition Surveys (SEANUTS Malaysia), a total of 1307 children aged 1–6 years with complete datasets were included in this analysis. Dietary intake was assessed using age-specific, validated food frequency questionnaires. On average, Malaysian children consumed 0.91 and 1.07 servings of fruits and vegetables per day, respectively. Less than one-fifth of the children achieved the daily recommended servings of fruits (11.7%) and vegetables (15.8%). Fruit intake was associated with age, parental educational level and geographical region, and vegetable intake was associated with ethnicity and geographical region. There was little evidence of an association between fruit and vegetable intake and children’s anthropometric status, but an adequate intake of fruits and vegetables contributed significantly and differently to children’s micronutrient intake. Future nutrition interventions should focus on addressing the sociodemographic determinants and be tailored to the needs of the low consumers to more effectively promote and encourage the adequate intake of fruit and vegetables among young children. PMID:28758956
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Chong, Kar Hau; Lee, Shoo Thien; Ng, Swee Ai; Khouw, Ilse; Poh, Bee Koon
2017-07-31
This study aimed to assess fruit and vegetable intake patterns and their associations with sociodemographic characteristics, anthropometric status and nutrient intake profiles among Malaysian children aged 1-6 years. Using the Malaysian dataset of South East Asian Nutrition Surveys (SEANUTS Malaysia), a total of 1307 children aged 1-6 years with complete datasets were included in this analysis. Dietary intake was assessed using age-specific, validated food frequency questionnaires. On average, Malaysian children consumed 0.91 and 1.07 servings of fruits and vegetables per day, respectively. Less than one-fifth of the children achieved the daily recommended servings of fruits (11.7%) and vegetables (15.8%). Fruit intake was associated with age, parental educational level and geographical region, and vegetable intake was associated with ethnicity and geographical region. There was little evidence of an association between fruit and vegetable intake and children's anthropometric status, but an adequate intake of fruits and vegetables contributed significantly and differently to children's micronutrient intake. Future nutrition interventions should focus on addressing the sociodemographic determinants and be tailored to the needs of the low consumers to more effectively promote and encourage the adequate intake of fruit and vegetables among young children.
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Classifying and comparing spatial models of fire dynamics
Geoffrey J. Cary; Robert E. Keane; Mike D. Flannigan
2007-01-01
Wildland fire is a significant disturbance in many ecosystems worldwide and the interaction of fire with climate and vegetation over long time spans has major effects on vegetation dynamics, ecosystem carbon budgets, and patterns of biodiversity. Landscape-Fire-Succession Models (LFSMs) that simulate the linked processes of fire and vegetation development in a spatial...
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Predicting opportunities for greening and patterns of vegetation on private urban lands
Austin R. Troy; J. Morgan Grove; Jarlath P.M. O' Neil-Dunne; Steward T.A. Pickett; Mary L. Cadenasso
2007-01-01
This paper examines predictors of vegetative cover on private lands in Baltimore, Maryland. Using high-resolution spatial data, we generated two measures: "possible stewardship," which is the proportion of private land that does not have built structures on it and hence has the possibility of supporting vegetation, and "realized stewardship," which...
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USDA-ARS?s Scientific Manuscript database
Sichuan Basin in southwestern China is a region of great conservation concern due to poor vegetation recovery on steep roadside slopes, yet little is known about the influence of edaphic factors on plant community dynamics of disturbed slopes. A greater understanding of vegetation patterns across va...
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USDA-ARS?s Scientific Manuscript database
We examined vegetation selection patterns of nursing Angus X Hereford crossbred (AH) and Raramuri Criollo (RC) cows grazing Chihuahuan Desert vegetation during the growing season. Eleven cows of each group grazed separately in two large pastures (1190ha, 1165ha) from mid-July until mid-August 2015 (...
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NASA Astrophysics Data System (ADS)
Dick, Jonathan; Tetzlaff, Doerthe; Bradford, John; Soulsby, Chris
2018-04-01
As the relationship between vegetation and soil moisture is complex and reciprocal, there is a need to understand how spatial patterns in soil moisture influence the distribution of vegetation, and how the structure of vegetation canopies and root networks regulates the partitioning of precipitation. Spatial patterns of soil moisture are often difficult to visualise as usually, soil moisture is measured at point scales, and often difficult to extrapolate. Here, we address the difficulties in collecting large amounts of spatial soil moisture data through a study combining plot- and transect-scale electrical resistivity tomography (ERT) surveys to estimate soil moisture in a 3.2 km2 upland catchment in the Scottish Highlands. The aim was to assess the spatio-temporal variability in soil moisture under Scots pine forest (Pinus sylvestris) and heather moorland shrubs (Calluna vulgaris); the two dominant vegetation types in the Scottish Highlands. The study focussed on one year of fortnightly ERT surveys. The surveyed resistivity data was inverted and Archie's law was used to calculate volumetric soil moisture by estimating parameters and comparing against field measured data. Results showed that spatial soil moisture patterns were more heterogeneous in the forest site, as were patterns of wetting and drying, which can be linked to vegetation distribution and canopy structure. The heather site showed a less heterogeneous response to wetting and drying, reflecting the more uniform vegetation cover of the shrubs. Comparing soil moisture temporal variability during growing and non-growing seasons revealed further contrasts: under the heather there was little change in soil moisture during the growing season. Greatest changes in the forest were in areas where the trees were concentrated reflecting water uptake and canopy partitioning. Such differences have implications for climate and land use changes; increased forest cover can lead to greater spatial variability, greater growing season temporal variability, and reduced levels of soil moisture, whilst projected decreasing summer precipitation may alter the feedbacks between soil moisture and vegetation water use and increase growing season soil moisture deficits.
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Eating patterns and lipid levels in older adolescent girls.
Bradlee, M L; Singer, M R; Daniels, S R; Moore, L L
2013-03-01
Few studies have evaluated the effects of food-based eating patterns on adolescent lipid levels. This study examines whether usual adolescent eating patterns (ages 9-17 years) predict lipid levels at 18-20 years of age. This study uses previously collected data from the longitudinal NHLBI Growth and Health Study in which 2379 girls were enrolled at ages 9-10 years and followed for ten years. Food-based eating patterns were derived from multiple 3-day diet records. After adjusting for age, race, socioeconomic status, height, physical activity, and television viewing, girls with higher intakes of dairy, fruit and non-starchy vegetables had about a 40-50% reduced risk an LDL-C ≥ 170 mg/dL and non-HDL-C ≥ 145 mg/dL. Diets characterized by higher intakes of dairy and whole grains had similar benefits on TC and LDL-C. Girls consuming more fruits and non-starchy vegetables as well as more whole grains were much less likely to have high-risk lipid levels. Lean meat, poultry and fish when consumed in the context of other healthy eating patterns had no adverse effects on lipid levels in late adolescence. In fact when consumed with higher amounts of fruit and non-starchy vegetables, lean meat, poultry and fish had beneficial effects on HDL. Finally, dietary patterns that included more whole grains tended to be associated with lower TG levels. Healthy childhood eating patterns characterized by higher intakes of a variety of fruits, vegetables, whole grains, dairy, lean meat, poultry and fish are important modifiable predictors of lipid levels in late adolescence. Copyright © 2011 Elsevier B.V. All rights reserved.
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2010-01-01
Background Patterns of food intake and prevalent osteoarthritis of the hand, hip, and knee were studied using the twin design to limit the effect of confounding factors. Compounds found in associated food groups were further studied in vitro. Methods Cross-sectional study conducted in a large population-based volunteer cohort of twins. Food intake was evaluated using the Food Frequency Questionnaire; OA was determined using plain radiographs. Analyses were adjusted for age, BMI and physical activity. Subsequent in vitro studies examined the effects of allium-derived compounds on the expression of matrix-degrading proteases in SW1353 chondrosarcoma cells. Results Data were available, depending on phenotype, for 654-1082 of 1086 female twins (median age 58.9 years; range 46-77). Trends in dietary analysis revealed a specific pattern of dietary intake, that high in fruit and vegetables, showed an inverse association with hip OA (p = 0.022). Consumption of 'non-citrus fruit' (p = 0.015) and 'alliums' (p = 0.029) had the strongest protective effect. Alliums contain diallyl disulphide which was shown to abrogate cytokine-induced matrix metalloproteinase expression. Conclusions Studies of diet are notorious for their confounding by lifestyle effects. While taking account of BMI, the data show an independent effect of a diet high in fruit and vegetables, suggesting it to be protective against radiographic hip OA. Furthermore, diallyl disulphide, a compound found in garlic and other alliums, represses the expression of matrix-degrading proteases in chondrocyte-like cells, providing a potential mechanism of action. PMID:21143861
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Vegetation-induced spatial variability of soil redox properties in wetlands
NASA Astrophysics Data System (ADS)
Szalai, Zoltán; Jakab, Gergely; Kiss, Klaudia; Ringer, Marianna; Balázs, Réka; Zacháry, Dóra; Horváth Szabó, Kata; Perényi, Katalin
2016-04-01
Vegetation induced land patches may result spatial pattern of on soil Eh and pH. These spatial pattern are mainly emerged by differences of aeration and exudation of assimilates. Present paper focuses on vertical extent and temporal dynamics of these patterns in wetlands. Two study sites were selected: 1. a plain wetland on calcareous sandy parent material (Ceglédbercel, Danube-Tisza Interfluve, Hungary); 2. headwater wetland with calcareous loamy parent material (Bátaapáti, Hungary). Two vegetation patches were studied in site 1: sedgy (dominated by Carex riparia) and reedy (dominated by Phragmites australis). Three patches were studied in site2: sedgy1 (dominated by C vulpina), sedgy 2 (C. riparia); nettle-horsetail (Urtica dioica and Equisetum arvense). Boundaries between patches were studied separately. Soil redox, pH and temperature studied by automated remote controlled instruments. Three digital sensors (Ponsell) were installed in each locations: 20cm and 40cm sensors represent the solum and 100 cm sensor monitors the subsoil). Groundwater wells were installed near to triplets for soil water sampling. Soil Eh, pH and temperature values were recorded in each 10 minutes. Soil water sampling for iron and DOC were carried out during saturated periods. Spatial pattern of soil Eh is clearly caused by vegetation. We measured significant differences between Eh values of the studied patches in the solum. We did not find this kinds horizontal differences in the subsoil. Boundaries of the patches usually had more reductive soil environment than the core areas. We have found temporal dynamics of the spatial redox pattern. Differences were not so well expressed during wintertime. These spatial patterns had influence on the DOC and iron content of porewater, as well. Highest temporal dynamics of soil redox properties and porewater iron could be found in the boundaries. These observations refer to importance patchiness of vegetation on soil chemical properties in wetlands. Authors are grateful to Hungarian Scientific research Fund (K100180)
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Cynthia D. Huebner; Todd Hutchinson; Todd Ristau; Alejandro Royo; James Steinman
2012-01-01
Use of environmental variables as predictors of vegetation distribution patterns has long been a focus of ecology. However, the effect of edaphic factors on vegetation pattern is often measured using surrogates such as topography, because accurate measures of soil fertility and nutrients are unavailable or rare (Marage and Gégout 2009). Kalmia latifolia...
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Richard Tran Mills; Jitendra Kumar; Forrest M. Hoffman; William W. Hargrove; Joseph P. Spruce; Steven P. Norman
2013-01-01
We investigated the use of principal components analysis (PCA) to visualize dominant patterns and identify anomalies in a multi-year land surface phenology data set (231 m à 231 m normalized difference vegetation index (NDVI) values derived from the Moderate Resolution Imaging Spectroradiometer (MODIS)) used for detecting threats to forest health in the conterminous...
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G. Gonzalez; F.J. Rivera-Figueroa; W. Gould; S.A. Cantrell; J.R. Pérez-Jiménez
2014-01-01
In this study, we determine differences in total biomass of soil microorganisms and community structure (using the most probable number of bacteria (MPN) and the number of fungal genera) in patterned ground features (PGF) and adjacent vegetated soils (AVS) in mesic sites from three High Arctic islands in order to characterize microbial dynamics as affected by...
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Desert camouflage and what wildlife see
Kuhne, Wendy W.; Duff, Martine C.; Salvaggio, Katie; ...
2017-10-26
Desert, desert-scrub, savanna and sandy beach and lakeshore environments can be particularly tricky in terms of camouflage selection due to their low vegetative density. Therefore many companies focus on the development of paint color schemes that match the vegetation and the desert soils/sands. However another factor in the consideration of which camouflage to purchase may lie in what the animal can see. White-tailed deer and similar large mammals have been shown to have three classes of photo pigments that are sensitive to the range of blue to yellowgreen during day light hours and blue to blue-green at night. Six commercially-availablemore » camouflage patterns were investigated to determine if the reflectance characteristics measured in the laboratory and under field conditions were elevated in the blue range and perhaps more likely to be seen by wildlife. The camouflage patterns were evaluated against standard vegetation indices including NDVI, SAVI, EVI, and SR. Only two of the patterns (S4 and S5) possessed a reflectance more like vegetation. Patterns S4, S6, S3, and S2 all showed only slight elevations in the blue wavelength range which could only have been detected by NIR measurements instead of visual observation by the human eye.« less
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Desert camouflage and what wildlife see
DOE Office of Scientific and Technical Information (OSTI.GOV)
Kuhne, Wendy W.; Duff, Martine C.; Salvaggio, Katie
Desert, desert-scrub, savanna and sandy beach and lakeshore environments can be particularly tricky in terms of camouflage selection due to their low vegetative density. Therefore many companies focus on the development of paint color schemes that match the vegetation and the desert soils/sands. However another factor in the consideration of which camouflage to purchase may lie in what the animal can see. White-tailed deer and similar large mammals have been shown to have three classes of photo pigments that are sensitive to the range of blue to yellowgreen during day light hours and blue to blue-green at night. Six commercially-availablemore » camouflage patterns were investigated to determine if the reflectance characteristics measured in the laboratory and under field conditions were elevated in the blue range and perhaps more likely to be seen by wildlife. The camouflage patterns were evaluated against standard vegetation indices including NDVI, SAVI, EVI, and SR. Only two of the patterns (S4 and S5) possessed a reflectance more like vegetation. Patterns S4, S6, S3, and S2 all showed only slight elevations in the blue wavelength range which could only have been detected by NIR measurements instead of visual observation by the human eye.« less
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Global Analysis of Empirical Relationships Between Annual Climate and Seasonality of NDVI
NASA Technical Reports Server (NTRS)
Potter, C. S.
1997-01-01
This study describes the use of satellite data to calibrate a new climate-vegetation greenness function for global change studies. We examined statistical relationships between annual climate indexes (temperature, precipitation, and surface radiation) and seasonal attributes of the AVHRR Normalized Difference Vegetation Index (NDVI) time series for the mid-1980s in order to refine our empirical understanding of intraannual patterns and global abiotic controls on natural vegetation dynamics. Multiple linear regression results using global l(sup o) gridded data sets suggest that three climate indexes: growing degree days, annual precipitation total, and an annual moisture index together can account to 70-80 percent of the variation in the NDVI seasonal extremes (maximum and minimum values) for the calibration year 1984. Inclusion of the same climate index values from the previous year explained no significant additional portion of the global scale variation in NDVI seasonal extremes. The monthly timing of NDVI extremes was closely associated with seasonal patterns in maximum and minimum temperature and rainfall, with lag times of 1 to 2 months. We separated well-drained areas from l(sup o) grid cells mapped as greater than 25 percent inundated coverage for estimation of both the magnitude and timing of seasonal NDVI maximum values. Predicted monthly NDVI, derived from our climate-based regression equations and Fourier smoothing algorithms, shows good agreement with observed NDVI at a series of ecosystem test locations from around the globe. Regions in which NDVI seasonal extremes were not accurately predicted are mainly high latitude ecosystems and other remote locations where climate station data are sparse.
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Characteristics of vegetation phenology over the Alaskan landscape using AVHRR time-series data
Markon, Carl J.; Fleming, Michael D.; Binnian, Emily F.
1995-01-01
Advanced Very High Resolution Radiometer (AVHRR) satellite data were acquired and composited into twice-a-month periods from 1 May 1991 to 15 October 1991 in order to map vegetation characteristics of the Alaskan landscape. Unique spatial and temporal qualities of the AVHRR data provide information that leads to a better understanding of regional biophysical characteristics of vegetation communities and patterns. These data provided synoptic views of the landscape and depicted phenological diversity, temporal vegetation phenology (green-up, peak of green, and senescence), photosynthetic activity, and regional landscape patterns. Products generated from the data included a phenological class map, phenological composite maps (onset, peak, and duration), and photosynthetic activity maps (mean and maximum greenness). The time-series data provide opportunities to study phenological processes at small landscape scales over time periods of weeks, months, and years. Regional patterns identified on some of the maps are unique to specific areas; others correspond to biophysical or ecoregional boundaries. The data provide new insights to landscape processes, ecology, and landscape physiognomy that allow scientists to look at landscapes in ways that were previously difficult to achieve.
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Amini, Massoud; Esmaillzadeh, Ahmad; Shafaeizadeh, Shila; Behrooz, Jhila; Zare, Maryam
2010-10-01
Dietary habits have been associated with the prevalence of the metabolic syndrome and limited data are available in this field for individuals with impaired glucose tolerance. This study focused on the association between major dietary patterns and prevalence of the metabolic syndrome in individuals with impaired glucose tolerance. This cross-sectional study was done in 425 subjects 35 to 55 y of age. Dietary data were collected using a food-frequency questionnaire. Blood pressure, waist circumference, glucose, triacylglycerols, and high-density lipoprotein cholesterol were measured and metabolic syndrome was defined based on Adult Treatment Panel III guidelines. Five major dietary patterns were found: a western pattern (high in sweets, butter, soda, mayonnaise, sugar, cookies, tail of a lamb, hydrogenated fat, and eggs), a prudent pattern (high in fish, peas, honey, nuts, juice, dry fruits, vegetable oil, liver and organic meat, and coconuts and low in hydrogenated fat and non-leafy vegetables), a vegetarian pattern (high in potatoes, legumes, fruits rich in vitamin C, rice, green leafy vegetables, and fruits rich in vitamin A), a high-fat dairy pattern (high in high-fat yogurt and high-fat milk and low in low-fat yogurt, peas, and bread), and a chicken and plant pattern (high in chicken, fruits rich in vitamin A, green leafy vegetables, and mayonnaise and low in beef, liver, and organic meat). After adjusting for confounding variables, the western pattern was associated with greater odds of having increased triacylglycerol (odds ratio 1.76, 95% confidence interval 1.01-3.07) and blood pressure (odds ratio 2.62, 95% confidence interval 1.32-5.23). The prudent pattern was positively associated with a prevalence of low high-density lipoprotein cholesterol levels (odds ratio 0.55, 95% confidence interval 0.31-0.96). The vegetarian dietary pattern was inversely associated with a risk of an abnormal fasting blood glucose level (odds ratio 2.26, 95% confidence interval 1.25-4.06). Major dietary patterns were significantly associated with the risk of metabolic syndrome. Copyright © 2010 Elsevier Inc. All rights reserved.
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Major dietary patterns in relation to stunting among children in Tehran, Iran.
Esfarjani, Fatemeh; Roustaee, Roshanak; Mohammadi-Nasrabadi, Fatemeh; Esmaillzadeh, Ahmad
2013-06-01
To the best of our knowledge, no information is available to link major dietary patterns to stunting during childhood, although dietary patterns are associated with chronic diseases. This study was conducted to determine the relationship between major dietary patterns and stunting in the first grade pupils of Tehran in 2009. In this case-control study, 86 stunted children (defined as height-for-age of less than the 5th percentile of CDC2000 cutoff points) were enrolled from among 3,147 first grade pupils of Tehran, selected using a multistage cluster random-sampling method. Participants for the control group (n=308) were selected randomly from non-stunted children (height-for-age more than the 5th percentile of CDC2000 cutoff points), after matching for age, sex, and area of residence. Dietary data were collected using two 24-hour dietary recalls through face-to-face interview with mothers. Factor analysis was used for identifying major dietary patterns. Mean consumption of dairy products (308 +/- 167 vs 382 +/- 232 g/day, p < 0.05), dried fruits and nuts (2.5819 vs 7.15 +/- 26 g/day, p < 0.05) were significantly lower among stunted children than those in the control group. Three major dietary patterns were identified: 'traditional dietary pattern' that was dominated by bread, potato, fats, eggs, flavours, vegetables other than leafy ones, sugar, drinks, and fast food; 'mixed dietary pattern' that was dominated by leafy vegetables, fast foods, nuts, fats, cereals other than bread, fruits, legumes, visceral meats, sugars, eggs, and vegetables other than leafy vegetables; and 'carbohydrate-protein pattern' that was dominated by sweets and desserts, poultry, dairy, fruits, legumes, and visceral meats. No significant relationships were found between traditional and mixed dietary patterns and stunting. Individuals in the third quartile of carbohydrate-protein dietary pattern were less likely to be stunted compared to those in the bottom quartile (OR: 0.31, 95% CI 0.13-0.78, p < 0.05). Adherence to dietary patterns high in protein (e.g. dairy, legumes, and meat products) and carbohydrates (e.g. fruits, sweets, and desserts) might be associated with reduced odds of being stunted among children.
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Lau, Cathrine; Toft, Ulla; Tetens, Inge; Carstensen, Bendix; Jørgensen, Torben; Pedersen, Oluf; Borch-Johnsen, Knut
2009-03-01
We examined whether the adherence to major dietary patterns at baseline of 5824 nondiabetic Danes (30-60 y) enrolled in the nonpharmacological Inter99 intervention predicted changes in fasting plasma glucose (FPG) and postchallenge 2-h plasma glucose (2h-PG) concentrations during a 5 y period and whether a potential association was dependent on baseline glucose tolerance status. Through principal component analysis, a score for a traditional dietary pattern (characterized by higher intakes of high-fat sandwich spreads, red meat, potatoes, butter and lard, low-fat fish, sandwich meat, and sauces) and a score for a modern dietary pattern (characterized by higher intakes of vegetables, fruit, vegetable oil/vinegar dressing, poultry, pasta, rice, and cereals) were estimated for each person at baseline. Random effect models adjusting for relevant confounders were used to estimate changes in repetitive measures of FPG and 2h-PG. A higher modern score (of 1 SD) predicted an annual decrease in 2h-PG of 0.015 mmol/L (P < 0.01) regardless of glucose tolerance status. For individuals with isolated impaired glucose tolerance, a higher traditional score (of 1 SD) predicted an annual increase in 2h-PG of 0.083 mmol/L (P < 0.0001). In conclusion, glucose tolerance status did not, in general, affect the predictive effect of the dietary patterns. The study suggests that the risk of worsening 2h-PG concentrations may be smaller for individuals with a high modern dietary pattern score characterized by high intakes of vegetables, fruit, vegetable oil/vinegar dressing, poultry, pasta, rice, and cereals.
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NASA Astrophysics Data System (ADS)
Okie, J.; Gould, W. A.; González, G.
2006-12-01
Patterned ground is a ubiquitous feature in the Arctic and the related variation in microtopographic relief strongly affects biotic and abiotic patterns and processes. Patterned ground features are polygenic in origin and are often found superimposed in a complex pattern of multiple features. We investigated the relationship between thaw depth, micro-relief, the cover of vascular, bryophyte, cryptogamic crust and bare ground along transects traversing non-sorted circles and small non-sorted polygons at 8 research sites along a climatic gradient in bioclimatic subzones A-E in the North American Arctic. Non-sorted circles are the result of differential frost heave with circle centers typically showing greater heave during freezing than inter circle areas. Differential heave is a function of climate, soil texture, soil moisture, and vegetation cover. Differential heave and subsidence creates fine-scale gradients in microtopography that affect soil moisture, exposure to winds, and development of vegetation and soils. Non-sorted circles typically range from 20 to 200 cm in diameter and are most common in subzones C-E. Often superimposed on these features are the development of small non-sorted polygons 10-30 cm in diameter, and fine-scale desiccation cracking at a scale of less than 10 cm. These are most common in subzones A-C. We established three 20 m transects in zonal vegetation at each site. Thaw depth, micro-relief, and ground cover were measured at 10 cm intervals along each transect. Additionally, we measured vascular plant beta diversity in a set of 25 x 25 cm quadrates on 15 circles and 15 inter circles at each site. The resulting pattern of thaw depth and micro-relief is correlated with both summer temperatures and vegetation cover. The variability and degree of micro-relief decrease from the Low to the High Arctic. Non-sorted circle centers had deeper active layer than inter circle areas along the gradient. Thaw depths increase linearly with the degree of bare ground and nonlinearly with summer warmth. This unimodal pattern of shallower active layer at the warmest and coldest sites is due to the interaction of climate and the insulating vegetation layer. Greatest thaw depths are found on bare non-sorted circles in subzone C. Beta diversity is greatest in subzone D, where vegetated inter circle areas differ markedly from more barren non- sorted circles.
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Nozue, Shuho; Katayama, Mitsunori; Terazima, Masahide; Kumazaki, Shigeichi
2017-09-01
Heterocyst is a nitrogen-fixing cell differentiated from a cell for oxygen-evolving photosynthesis (vegetative cell) in some filamentous cyanobacteria when fixed nitrogen (e.g., ammonia and nitrate) is limited. Heterocysts appear at multiple separated positions in a single filament with an interval of 10-20 cells in some genera (including Anabaena variabilis). In other genera, a single heterocyst appears only at the basal terminal in a filament (including Rivularia M-261). Such morphological diversity may necessitate different properties of heterocysts. However, possible differences in heterocysts have largely remained unexplored due to the minority of heterocysts among major vegetative cells. Here, we have applied spectroscopic microscopy to Rivularia and A. variabilis to analyze their thylakoid membranes in individual cells. Absorption and fluorescence spectral imaging enabled us to estimate concentrations and interconnections of key photosynthetic components like photosystem I (PSI), photosystem II (PSII) and subunits of light-harvesting phycobilisome including phycocyanin (PC). The concentration of PC in heterocysts of Rivularia is far higher than that of A. variabilis. Fluorescence quantum yield of PC in Rivularia heterocysts was found to be virtually the same as those in its vegetative cells, while fluorescence quantum yield of PC in A. variabilis heterocysts was enhanced in comparison with its vegetative cells. PSI concentration in the thylakoid membranes of heterocysts seems to remain nearly the same as those of the vegetative cells in both the species. The average stoichiometric ratio between PSI monomer and PC hexamer in Rivularia heterocysts is estimated to be about 1:1. Copyright © 2017 Elsevier B.V. All rights reserved.
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Physically Modeling Stream Channel Adjustment to Woody Riparian Vegetation
NASA Astrophysics Data System (ADS)
Bennett, S. J.; Alonso, C. V.
2003-12-01
Stream restoration designs often use vegetation to promote bank and channel stability, to facilitate point-bar development, and to encourage natural colonization of riparian species. Here we examine the adjustment of an alluvial channel to in-stream and riparian vegetation using a distorted Froude-scale flume model with a movable boundary. A decimeter-scale trapezoidal channel comprised of 0.8-mm diameter sand was systematically vegetated with emergent, rigid dowels (3-mm in diameter) in rectangular and hemispherical patterns with varying vegetation densities while conserving the shape of the zone and the geometry of the vegetal patterns. Alternate sides of the channel were vegetated at the prescribed spacing of equilibrium alternate bars, ca. 5 to 7 times the channel width. Using flow conditions just below the threshold of sediment motion, flow obstruction, deflection, and acceleration caused bed erosion, bank failure, and morphologic channel adjustments that were wholly attributable to the managed plantings. As vegetation density increased, the magnitude and rate of scaled channel adjustment increased, which included increased channel widths, bankline steepening and meandering, and thalweg meandering. As the modeled channel began to meander, the stream bed aggraded and flow depth decreased markedly, creating a continuously connected, inter-reach complex of mid-channel bars. This study demonstrates the utility of using managed vegetations in stream corridor design and meander development, and it provides the practitioner with guidance on the magnitude of channel adjustment as it relates to vegetation density, shape, and spacing.
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NASA Technical Reports Server (NTRS)
Turcotte, Kevin M.; Kramber, William J.; Venugopal, Gopalan; Lulla, Kamlesh
1989-01-01
Previous studies have shown that a good relationship exists between AVHRR Normalized Difference Vegetation Index (NDVI) measurements, and both regional-scale patterns of vegetation seasonality and productivity. Most of these studies used known samples of vegetation types. An alternative approach, and the objective was to examine the above relationships by analyzing one year of AVHRR NDVI data that was stratified using a small-scale vegetation map of Mexico. The results show that there is a good relationship between AVHRR NDVI measurements and regional-scale vegetation dynamics of Mexico.
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Garzia, Aitor; Etxebeste, Oier; Rodríguez-Romero, Julio; Fischer, Reinhard; Espeso, Eduardo A.
2013-01-01
Morphogenesis encompasses programmed changes in gene expression that lead to the development of specialized cell types. In the model fungus Aspergillus nidulans, asexual development involves the formation of characteristic cell types, collectively known as the conidiophore. With the aim of determining the transcriptional changes that occur upon induction of asexual development, we have applied massive mRNA sequencing to compare the expression pattern of 19-h-old submerged vegetative cells (hyphae) with that of similar hyphae after exposure to the air for 5 h. We found that the expression of 2,222 (20.3%) of the predicted 10,943 A. nidulans transcripts was significantly modified after air exposure, 2,035 being downregulated and 187 upregulated. The activation during this transition of genes that belong specifically to the asexual developmental pathway was confirmed. Another remarkable quantitative change occurred in the expression of genes involved in carbon or nitrogen primary metabolism. Genes participating in polar growth or sexual development were transcriptionally repressed, as were those belonging to the HogA/SakA stress response mitogen-activated protein (MAP) kinase pathway. We also identified significant expression changes in several genes purportedly involved in redox balance, transmembrane transport, secondary metabolite production, or transcriptional regulation, mainly binuclear-zinc cluster transcription factors. Genes coding for these four activities were usually grouped in metabolic clusters, which may bring regulatory implications for the induction of asexual development. These results provide a blueprint for further stage-specific gene expression studies during conidiophore development. PMID:23264642
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Jung, Eunsun; Cho, Jae Youl; Park, Deokhoon; Kim, Min Hee; Park, Beomseok; Lee, Sang Yeol; Lee, Jongsung
2015-02-01
Skin aging appears to be principally attributed to a decrease in type I collagen level and the regeneration ability of dermal fibroblasts. We hypothesized that vegetable peptones promote cell proliferation and production of type I collagen in human dermal fibroblasts. Therefore, we investigated the effects of vegetable peptones on cell proliferation and type I collagen production and their possible mechanisms in human dermal fibroblasts. Vegetable peptones significantly promoted cell proliferation in a concentration-dependent manner. In addition, the human luciferase type I collagen α2 promoter and type I procollagen synthesis assays showed that the vegetable peptones induced type I procollagen production by activating the type I collagen α2 promoter. Moreover, the vegetable peptones activated p90 ribosomal s6 kinase, which was mediated by activating the Raf-p44/42 mitogen-activated protein kinase signaling pathway. Furthermore, the vegetable peptone-induced increase in cell proliferation and type I collagen production decreased upon treatment with the ERK inhibitor PD98059. Taken together, these findings suggest that increased proliferation of human dermal fibroblasts and enhanced production of type I collagen by vegetable peptones occur primarily by inducing the p90 ribosomal s6 kinase-CCAAT/enhancer binding protein β phosphorylation pathway, which is mediated by activating Raf-ERK signaling. Copyright © 2015 Elsevier Inc. All rights reserved.
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Leong, Misha; Roderick, George K
2015-01-01
Global change has led to shifts in phenology, potentially disrupting species interactions such as plant-pollinator relationships. Advances in remote sensing techniques allow one to detect vegetation phenological diversity between different land use types, but it is not clear how this translates to other communities in the ecosystem. Here, we investigated the phenological diversity of the vegetation across a human-altered landscape including urban, agricultural, and natural land use types. We found that the patterns of change in the vegetation indices (EVI and NDVI) of human-altered landscapes are out of synchronization with the phenology in neighboring natural California grassland habitat. Comparing these findings to a spatio-temporal pollinator distribution dataset, EVI and NDVI were significant predictors of total bee abundance, a relationship that improved with time lags. This evidence supports the importance of differences in temporal dynamics between land use types. These findings also highlight the potential to utilize remote sensing data to make predictions for components of biodiversity that have tight vegetation associations, such as pollinators.
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Temporal and spatial patterns in vegetation and atmospheric properties from AVIRIS
DOE Office of Scientific and Technical Information (OSTI.GOV)
Roberts, D.A.; Green, R.O.; Adams, J.B.
1997-12-01
Little research has focused on the use of imaging spectrometry for change detection. In this paper, the authors apply Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data to the monitoring of seasonal changes in atmospheric water vapor, liquid water, and surface cover in the vicinity of the Jasper Ridge, CA, for three dates in 1992. Apparent surface reflectance was retrieved and water vapor and liquid water mapped by using a radiative-transfer-based inversion that accounts for spatially variable atmospheres. Spectral mixture analysis (SMA) was used to model reflectance data as mixtures of green vegetation (GV), nonphotosynthetic vegetation (NPV), soil, and shade. Temporal andmore » spatial patterns in endmember fractions and liquid water were compared to the normalized difference vegetation index (NDVI). The reflectance retrieval algorithm was tested by using a temporally invariant target.« less
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Albert, Nick W; Lewis, David H; Zhang, Huaibi; Schwinn, Kathy E; Jameson, Paula E; Davies, Kevin M
2011-03-01
We present an investigation of anthocyanin regulation over the entire petunia plant, determining the mechanisms governing complex floral pigmentation patterning and environmentally induced vegetative anthocyanin synthesis. DEEP PURPLE (DPL) and PURPLE HAZE (PHZ) encode members of the R2R3-MYB transcription factor family that regulate anthocyanin synthesis in petunia, and control anthocyanin production in vegetative tissues and contribute to floral pigmentation. In addition to these two MYB factors, the basic helix-loop-helix (bHLH) factor ANTHOCYANIN1 (AN1) and WD-repeat protein AN11, are also essential for vegetative pigmentation. The induction of anthocyanins in vegetative tissues by high light was tightly correlated to the induction of transcripts for PHZ and AN1. Interestingly, transcripts for PhMYB27, a putative R2R3-MYB active repressor, were highly expressed during non-inductive shade conditions and repressed during high light. The competitive inhibitor PhMYBx (R3-MYB) was expressed under high light, which may provide feedback repression. In floral tissues DPL regulates vein-associated anthocyanin pigmentation in the flower tube, while PHZ determines light-induced anthocyanin accumulation on exposed petal surfaces (bud-blush). A model is presented suggesting how complex floral and vegetative pigmentation patterns are derived in petunia in terms of MYB, bHLH and WDR co-regulators. © 2011 The Authors. The Plant Journal © 2011 Blackwell Publishing Ltd.
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Li, Haidong; Jiang, Jiang; Chen, Bin; Li, Yingkui; Xu, Yuyue; Shen, Weishou
2016-03-01
The eastern Himalayas, especially the Yarlung Zangbo Grand Canyon Nature Reserve (YNR), is a global hotspot of biodiversity because of a wide variety of climatic conditions and elevations ranging from 500 to > 7000 m above sea level (a.s.l.). The mountain ecosystems at different elevations are vulnerable to climate change; however, there has been little research into the patterns of vegetation greening and their response to global warming. The objective of this paper is to examine the pattern of vegetation greening in different altitudinal zones in the YNR and its relationship with vegetation types and climatic factors. Specifically, the inter-annual change of the normalized difference vegetation index (NDVI) and its variation along altitudinal gradient between 1999 and 2013 was investigated using SPOT-VGT NDVI data and ASTER global digital elevation model (GDEM) data. We found that annual NDVI increased by 17.58% in the YNR from 1999 to 2013, especially in regions dominated by broad-leaved and coniferous forests at lower elevations. The vegetation greening rate decreased significantly as elevation increased, with a threshold elevation of approximately 3000 m. Rising temperature played a dominant role in driving the increase in NDVI, while precipitation has no statistical relationship with changes in NDVI in this region. This study provides useful information to develop an integrated management and conservation plan for climate change adaptation and promote biodiversity conservation in the YNR.
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Vegetation, plant biomass, and net primary productivity patterns in the Canadian Arctic
NASA Astrophysics Data System (ADS)
Gould, W. A.; Raynolds, M.; Walker, D. A.
2003-01-01
We have developed maps of dominant vegetation types, plant functional types, percent vegetation cover, aboveground plant biomass, and above and belowground annual net primary productivity for Canada north of the northern limit of trees. The area mapped covers 2.5 million km2 including glaciers. Ice-free land covers 2.3 million km2 and represents 42% of all ice-free land in the Circumpolar Arctic. The maps combine information on climate, soils, geology, hydrology, remotely sensed vegetation classifications, previous vegetation studies, and regional expertise to define polygons drawn using photo-interpretation of a 1:4,000,000 scale advanced very high resolution radiometer (AVHRR) color infrared image basemap. Polygons are linked to vegetation description, associated properties, and descriptive literature through a series of lookup tables in a graphic information systems (GIS) database developed as a component of the Circumpolar Arctic Vegetation Map (CAVM) project. Polygons are classified into 20 landcover types including 17 vegetation types. Half of the region is sparsely vegetated (<50% vegetation cover), primarily in the High Arctic (bioclimatic subzones A-C). Whereas most (86%) of the estimated aboveground plant biomass (1.5 × 1015 g) and 87% of the estimated above and belowground annual net primary productivity (2.28 × 1014 g yr-1) are concentrated in the Low Arctic (subzones D and E). The maps present more explicit spatial patterns of vegetation and ecosystem attributes than have been previously available, the GIS database is useful in summarizing ecosystem properties and can be easily updated and integrated into circumpolar mapping efforts, and the derived estimates fall within the range of current published estimates.
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NASA Astrophysics Data System (ADS)
Qiu, Bingwen; Chen, Gong; Tang, Zhenghong; Lu, Difei; Wang, Zhuangzhuang; Chen, Chongchen
2017-11-01
The Three-North Shelter Forest Program (TNSFP) in China has been intensely invested for approximately 40 years. However, the efficacy of the TNSFP has been debatable due to the spatiotemporal complexity of vegetation changes. A novel framework was proposed for characterizing vegetation changes in the TNSFP region through Combining Trend and Temporal Similarity trajectory (COTTS). This framework could automatically and continuously address the fundamental questions on where, what, how and when vegetation changes have occurred. Vegetation trend was measured by a non-parametric method. The temporal similarity trajectory was tracked by the Jeffries-Matusita (JM) distance of the inter-annual vegetation indices temporal profiles and modeled using the logistic function. The COTTS approach was applied to examine the afforestation efforts of the TNSFP using 500 m 8-day composites MODIS datasets from 2001 to 2015. Accuracy assessment from the 1109 reference sites reveals that the COTTS is capable of automatically determining vegetation dynamic patterns, with an overall accuracy of 90.08% and a kappa coefficient of 0.8688. The efficacy of the TNSFP was evaluated through comprehensive considerations of vegetation, soil and wetness. Around 45.78% areas obtained increasing vegetation trend, 2.96% areas achieved bare soil decline and 4.50% areas exhibited increasing surface wetness. There were 4.49% areas under vegetation degradation & desertification. Spatiotemporal heterogeneity of efficacy of the TNSFP was revealed: great vegetation gain through the abrupt dynamic pattern in the semi-humid and humid regions, bare soil decline & potential efficacy in the semi-arid region and remarkable efficacy in functional region of Eastern Ordos.
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Characterization of high hydrostatic pressure-injured Bacillus subtilis cells.
Inaoka, Takashi; Kimura, Keitarou; Morimatsu, Kazuya; Yamamoto, Kazutaka
2017-06-01
High hydrostatic pressure (HHP) affects various cellular processes. Using a sporulation-deficient Bacillus subtilis strain, we characterized the properties of vegetative cells subjected to HHP. When stationary-phase cells were exposed to 250 MPa of HHP for 10 min at 25 °C, approximately 50% of cells were viable, although they exhibited a prolonged growth lag. The HHP-injured cells autolyzed in the presence of NaCl or KCl (at concentrations ≥100 mM). Superoxide dismutase slightly protected the viability of HHP-treated cells, whereas vegetative catalases had no effect. Thus, unlike HHP-injured Escherichia coli, oxidative stress only slightly affected vegetative B. subtilis subjected to HHP.
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Mayén, Ana-Lucia; Bovet, Pascal; Marti-Soler, Helena; Viswanathan, Bharathi; Gedeon, Jude; Paccaud, Fred; Marques-Vidal, Pedro; Stringhini, Silvia
2016-01-01
In high income countries, low socioeconomic status (SES) is related to unhealthier dietary patterns, while evidence on the social patterning of diet in low and middle income countries is scarce. In this study, we assess dietary patterns in the general population of a middle income country in the African region, the Republic of Seychelles, and examine their distribution according to educational level and income. Data was drawn from two independent national surveys conducted in the Seychelles among adults aged 25-64 years in 2004 (n = 1236) and 2013 (n = 1240). Dietary patterns were assessed by principal component analysis (PCA). Educational level and income were used as SES indicators. Data from both surveys were combined as no interaction was found between SES and year. Three dietary patterns were identified: "snacks and drinks", "fruit and vegetables" and "fish and rice". No significant associations were found between SES and the "snacks and drinks" pattern. Low vs. high SES individuals had lower adherence to the "fruit and vegetables" pattern [prevalence ratio (95% CI) 0.71 (0.60-0.83)] but a higher adherence to the traditional "fish and rice" pattern [1.58 (1.32-1.88)]. Income modified the association between education and the "fish and rice" pattern (p = 0.02), whereby low income individuals had a higher adherence to this pattern in both educational groups. Low SES individuals have a lower consumption of fruit and vegetables, but a higher consumption of traditional foods like fish and rice. The Seychelles may be at a degenerative diseases stage of the nutrition transition.
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NASA Astrophysics Data System (ADS)
Sawei, Jelin; Sani, Norrakiah Abdullah
2016-11-01
Bacillus cereus is a spore-forming, facultative anaerobic, motile microorganism that has been identified as a causative agent of two types of gastrointestinal diseases such as emetic and diarrhea. This foodborne pathogen is found in both vegetative cells and endospores form in foods such as rice either raw or cooked. The aim of this study is to investigate and determine the prevalence, characterize and identify the isolation of vegetative cells and endospores of B. cereus in thirty varieties (n=3) of raw rice from Sabah, Sarawak and Peninsular Malaysia. A total of 90 (n=90) raw rice were examined and 84 (93.33%) samples were positive to vegetative cells of B. cereus. However, only 32 (35.56%) samples were positive for endospore cells that able to germinate after samples were heated at 75°C for 15 mins. The mean log cfu/g for vegetative cells were higher range (0.00 - 4.1533) than visible endospores (0.00 - 3.7533 mean log cfu/g). Sample of raw red rice (UKMRC9) had significantly higher contamination by both vegetative cells and endospores at p<0.05, than the other raw rice samples.
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Toyomaki, Atsuhito; Koga, Minori; Okada, Emiko; Nakai, Yukiei; Miyazaki, Akane; Tamakoshi, Akiko; Kiso, Yoshinobu; Kusumi, Ichiro
2017-01-01
Several studies indicate that dietary habits are associated with mental health. We are interested in identifying not a specific single nutrient/food group but the population preferring specific food combinations that can be related to mental health. Very few studies have examined relationships between dietary patterns and multifaceted mental states using cluster analysis. The purpose of this study was to investigate population-level dietary patterns associated with mental state using cluster analysis. We focused on depressive state, sleep quality, subjective well-being, and impulsive behaviors using rating scales. Two hundred and seventy-nine Japanese middle-aged people participated in the present study. Dietary pattern was estimated using a brief self-administered diet-history questionnaire (the BDHQ). We conducted K-means cluster analysis using thirteen BDHQ food groups: milk, meat, fish, egg, pulses, potatoes, green and yellow vegetables, other vegetables, mushrooms, seaweed, sweets, fruits, and grain. We identified three clusters characterized as "vegetable and fruit dominant," "grain dominant," and "low grain tendency" subgroups. The vegetable and fruit dominant group showed increases in several aspects of subjective well-being demonstrated by the SF-8. Differences in mean subject characteristics across clusters were tested using ANOVA. The low frequency intake of grain group showed higher impulsive behavior, demonstrated by BIS-11 deliberation and sum scores. The present study demonstrated that traditional Japanese dietary patterns, such as eating rice, can help with beneficial changes in mental health.
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Toyomaki, Atsuhito; Koga, Minori; Okada, Emiko; Nakai, Yukiei; Miyazaki, Akane; Tamakoshi, Akiko; Kiso, Yoshinobu; Kusumi, Ichiro
2017-01-01
Several studies indicate that dietary habits are associated with mental health. We are interested in identifying not a specific single nutrient/food group but the population preferring specific food combinations that can be related to mental health. Very few studies have examined relationships between dietary patterns and multifaceted mental states using cluster analysis. The purpose of this study was to investigate population-level dietary patterns associated with mental state using cluster analysis. We focused on depressive state, sleep quality, subjective well-being, and impulsive behaviors using rating scales. Two hundred and seventy-nine Japanese middle-aged people participated in the present study. Dietary pattern was estimated using a brief self-administered diet-history questionnaire (the BDHQ). We conducted K-means cluster analysis using thirteen BDHQ food groups: milk, meat, fish, egg, pulses, potatoes, green and yellow vegetables, other vegetables, mushrooms, seaweed, sweets, fruits, and grain. We identified three clusters characterized as “vegetable and fruit dominant,” “grain dominant,” and “low grain tendency” subgroups. The vegetable and fruit dominant group showed increases in several aspects of subjective well-being demonstrated by the SF-8. Differences in mean subject characteristics across clusters were tested using ANOVA. The low frequency intake of grain group showed higher impulsive behavior, demonstrated by BIS-11 deliberation and sum scores. The present study demonstrated that traditional Japanese dietary patterns, such as eating rice, can help with beneficial changes in mental health. PMID:28704469
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Comparison of AVHRR and SMMR data for monitoring vegetation phenology on a continental scale
NASA Technical Reports Server (NTRS)
Justice, C. O.; Townshend, J. R. G.; Choudhury, B. J.
1989-01-01
AVHRR normalized difference vegetation index (NDVI) data for a one-year period were compared with Scanning Multichannel Microwave Radiometer microwave polarization difference temperature (MPDT) data for the study of vegetation phenology. It is shown that the MPDT response differs considerably from the seasonal NDVI pattern. The results do not support the hypothetical relationship between MPDT and leaf water content. It is found that only vegetation types with a substantial seasonal variation in the areal extent of vegetated cover show strong seasonality in MPDT data.
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NASA Astrophysics Data System (ADS)
Zhang, G.; Hu, A.; Wang, J.
2016-12-01
Aboveground vegetation and underground microbes are tightly associated and form a systematic entity to maintain terrestrial ecosystem functions; however, the roles and relative importance of vegetation to corresponding underlying microbial community remain clearly unresolved. Here we studied the vegetation and corresponding underground microbial communities along an elevation range of 704-3,760 m a.s.l on the Tibetan Plateau, which covering from a tropical forest to frigid shrub meadow ecosystem. By substituting space for time, we explored how the alteration of vegetation and abiotic environments jointly affect the underlying microbial communities. We found that vegetation showed a hump-shaped elevational pattern in diversity, while microbial community exhibited a two-section elevational pattern at a tipping point of 2400m elevation where vegetation diversity approximately peaks. The statistical analyses and regression modelling of the measures of underground microbial community including biomass, diversity, phylogenetic structure and community composition provided evidences of this threshold. Our findings highlighted that vegetation is a good predictor of underground microbial communities. Further statistical analyses suggested that alteration of vegetation and environmental filtering processes might be the vital driving forces jointly structuring underground microbial communities along an elevational gradient. Specifically, vegetation is a major contributor to underground microbes primarily through soil pH below the threshold (that is, in tropical and subtropical zones), while vegetation could directly influence underground microbes and also partly through its effects on several abiotic factors such as soil pH and WSOC above the threshold (that is, in temperate and frigid zones). These insights into the alteration of vegetation types and corresponding underground microbial communities provide new perspective on the aboveground and belowground interactions in forest ecosystems.
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Munson, Seth M.; Long, A. Lexine; Wallace, Cynthia; Webb, Robert H.
2016-01-01
Question The decline and loss of perennial vegetation in dryland ecosystems due to global change pressures can alter ecosystem properties and initiate land degradation processes. We tracked changes of perennial vegetation using remote sensing to address the question of how prolonged drought and land-use intensification have affected perennial vegetation cover across a desert region in the early 21st century? Location Mojave Desert, southeastern California, southern Nevada, southwestern Utah and northwestern Arizona, USA. Methods We coupled the Moderate-Resolution Imaging Spectroradiometer Enhanced Vegetation Index (MODIS-EVI) with ground-based measurements of perennial vegetation cover taken in about 2000 and about 2010. Using the difference between these years, we determined perennial vegetation changes in the early 21st century and related these shifts to climate, soil and landscape properties, and patterns of land use. Results We found a good fit between MODIS-EVI and perennial vegetation cover (2000: R2 = 0.83 and 2010: R2 = 0.74). The southwestern, far southeastern and central Mojave Desert had large declines in perennial vegetation cover in the early 21st century, while the northeastern and southeastern portions of the desert had increases. These changes were explained by 10-yr precipitation anomalies, particularly in the cool season and during extreme dry or wet years. Areas heavily impacted by visitor use or wildfire lost perennial vegetation cover, and vegetation in protected areas increased to a greater degree than in unprotected areas. Conclusions We find that we can extrapolate previously documented declines of perennial plant cover to an entire desert, and demonstrate that prolonged water shortages coupled with land-use intensification create identifiable patterns of vegetation change in dryland regions.
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Dietary patterns and metabolic syndrome factors in a non-diabetic Italian population.
Leite, Maria Léa Corrêa; Nicolosi, Alfredo
2009-09-01
To examine the relationship between dietary patterns and metabolic syndrome. Population-based cross-sectional study. The K-means clustering method was used to identify dietary patterns and logistic regression models were used to compare the adjusted prevalence rates of metabolic syndrome factors, stratifying by obesity status. The 1992-3 Italian Bollate Eye Study, a population-based survey carried out in the town of Bollate (Milan), Italy. A total of 1052 non-diabetic Italian subjects, 527 men and 525 women, aged 42-74 years. Five dietary clusters were identified: common, animal products, starch, vegetal/fat and vitamin/fibre. After adjusting for potential confounders, the starch group showed the highest prevalence of metabolic syndrome (36%) followed by the animal products group (30%); the vitamin/fibre (20%) and vegetal/fat groups (19%) showed the lowest prevalence. The starch group had more dyslipidaemia (higher TAG and lower HDL cholesterol levels) and the animal products group had a higher prevalence of impaired fasting glucose. The vitamin/fibre group had the lowest prevalence of abdominal obesity. The beneficial effect of the vegetal/fat and vitamin/fibre dietary patterns seemed stronger among the obese. Our results confirm the deleterious effect of a very-low-fat, high-carbohydrate diet and also of high intakes of animal products. The consumption of a diet high in vegetal fats or rich in fruits and vegetables is associated with a healthier metabolic profile. Reducing obesity is essential to prevent metabolic syndrome, but even among the obese dietary habits are important for preserving healthy lipid and glycaemic profiles.
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Valladares, Ana; Flores, Enrique; Herrero, Antonia
2016-02-01
Many filamentous cyanobacteria respond to the external cue of nitrogen scarcity by the differentiation of heterocysts, cells specialized in the fixation of atmospheric nitrogen in oxic environments. Heterocysts follow a spatial pattern along the filament of two heterocysts separated by ca. 10-15 vegetative cells performing oxygenic photosynthesis. HetR is a transcriptional regulator that directs heterocyst differentiation. In the model strain Anabaena sp. PCC 7120, the HetR protein was observed in various oligomeric forms in vivo, including a tetramer that peaked with maximal hetR expression during differentiation. Tetramers were not detected in a hetR point mutant incapable of differentiation, but were conspicuous in an over-differentiating strain lacking the PatS inhibitor. In differentiated filaments the HetR tetramer was restricted to heterocysts, being undetectable in vegetative cells. HetR co-purified with RNA polymerase from Anabaena mainly as a tetramer. In vitro, purified recombinant HetR was distributed between monomers, dimers, trimers and tetramers, and it was phosphorylated when incubated with (γ-(32)P)ATP. Phosphorylation and PatS hampered the accumulation of HetR tetramers and impaired HetR binding to DNA. In summary, tetrameric HetR appears to represent a functionally relevant form of HetR, whose abundance in the Anabaena filament could be negatively regulated by phosphorylation and by PatS. © 2015 John Wiley & Sons Ltd.
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Vegetation patterns and dynamics within riparian corridors are controlled largely by geomorphic position, substrate characteristics and hydrologic regimes. Understanding management and restoration options for riparian meadow complexes exhibiting stream incision requires knowledge...
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Small mammal abundance in Mediterranean post-fire habitats: a role for predators?
NASA Astrophysics Data System (ADS)
Torre, I.; Díaz, M.
2004-05-01
We studied patterns of small mammal abundance and species richness in post-fire habitats by sampling 33 plots (225 m 2 each) representing different stages of vegetation recovery after fire. Small mammal abundance was estimated by live trapping during early spring 1999 and vegetation structure was sampled by visual estimation at the same plots. Recently-burnt areas were characterised by shrubby and herbaceous vegetation with low structural variability, and unburnt areas were characterised by well developed forest cover with high structural complexity. Small mammal abundance and species richness decreased with time elapsed since the last fire (from 5 to at least 50 years), and these differences were associated to the decreasing cover of short shrubs as the post-fire succession of plant communities advanced. However, relationships between vegetation structure and small mammals differed among areas burned in different times, with weak or negative relationship in recently burnt areas and positive and stronger relationship in unburnt areas. Furthermore, the abundance of small mammals was larger than expected from vegetation structure in plots burned recently whereas the contrary pattern was found in unburned areas. We hypothesised that the pattern observed could be related to the responses of small mammal predators to changes in vegetation and landscape structure promoted by fire. Fire-related fragmentation could have promoted the isolation of forest predators (owls and carnivores) in unburned forest patches, a fact that could have produced a higher predation pressure for small mammals. Conversely, small mammal populations would have been enhanced in early post-fire stages by lower predator numbers combined with better predator protection in areas covered by resprouting woody vegetation.
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Ellison, L.E.; Everette, A.L.; Bogan, M.A.
2005-01-01
We conducted a preliminary study using small field crews, a single Anabat II detector coupled with a laptop computer, and point transects to examine patterns of bat activity at a scale of interest to local resource managers. The study was conducted during summers of 1996–1998 in Bandelier National Monument in the Jemez Mountains of northern New Mexico, a landscape with distinct vegetation zones and high species richness of bats. We developed simple models that described general patterns of acoustic activity within 4 vegetation zones based primarily on nightly variation and a qualitative index of habitat complexity. Bat acoustic activity (number of bat passes&sol point) did not vary dramatically among a limited sample of transects within a vegetation zone during 1996. In 1997 and 1998, single transects within each vegetation zone were established, and bat activity did not vary annually within these zones. Acoustic activity differed among the 4 vegetation zones of interest, with the greatest activity occurring in riparian canyon bottomland, intermediate activity in coniferous forest and a 1977 burned zone, and lowest activity in piñon-juniper woodlands. We identified 68.5% of 2,529 bat passes recorded during point-transect surveys to species using an echolocation call reference library we established for the area and qualitative characteristics of bat calls. Bat species richness and composition differed among vegetation zones. Results of these efforts were consistent with general knowledge of where different bat species typically forage and with the natural history of bats of New Mexico, suggesting such a method might have value for drawing inferences about bat activity in different vegetation zones.
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Shafer, Sarah; Bartlein, Patrick J.; Gray, Elizabeth M.; Pelltier, Richard T.
2015-01-01
Future climate change may significantly alter the distributions of many plant taxa. The effects of climate change may be particularly large in mountainous regions where climate can vary significantly with elevation. Understanding potential future vegetation changes in these regions requires methods that can resolve vegetation responses to climate change at fine spatial resolutions. We used LPJ, a dynamic global vegetation model, to assess potential future vegetation changes for a large topographically complex area of the northwest United States and southwest Canada (38.0–58.0°N latitude by 136.6–103.0°W longitude). LPJ is a process-based vegetation model that mechanistically simulates the effect of changing climate and atmospheric CO2 concentrations on vegetation. It was developed and has been mostly applied at spatial resolutions of 10-minutes or coarser. In this study, we used LPJ at a 30-second (~1-km) spatial resolution to simulate potential vegetation changes for 2070–2099. LPJ was run using downscaled future climate simulations from five coupled atmosphere-ocean general circulation models (CCSM3, CGCM3.1(T47), GISS-ER, MIROC3.2(medres), UKMO-HadCM3) produced using the A2 greenhouse gases emissions scenario. Under projected future climate and atmospheric CO2 concentrations, the simulated vegetation changes result in the contraction of alpine, shrub-steppe, and xeric shrub vegetation across the study area and the expansion of woodland and forest vegetation. Large areas of maritime cool forest and cold forest are simulated to persist under projected future conditions. The fine spatial-scale vegetation simulations resolve patterns of vegetation change that are not visible at coarser resolutions and these fine-scale patterns are particularly important for understanding potential future vegetation changes in topographically complex areas.
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Shafer, Sarah L.; Bartlein, Patrick J.; Gray, Elizabeth M.; Pelltier, Richard T.
2015-01-01
Future climate change may significantly alter the distributions of many plant taxa. The effects of climate change may be particularly large in mountainous regions where climate can vary significantly with elevation. Understanding potential future vegetation changes in these regions requires methods that can resolve vegetation responses to climate change at fine spatial resolutions. We used LPJ, a dynamic global vegetation model, to assess potential future vegetation changes for a large topographically complex area of the northwest United States and southwest Canada (38.0–58.0°N latitude by 136.6–103.0°W longitude). LPJ is a process-based vegetation model that mechanistically simulates the effect of changing climate and atmospheric CO2 concentrations on vegetation. It was developed and has been mostly applied at spatial resolutions of 10-minutes or coarser. In this study, we used LPJ at a 30-second (~1-km) spatial resolution to simulate potential vegetation changes for 2070–2099. LPJ was run using downscaled future climate simulations from five coupled atmosphere-ocean general circulation models (CCSM3, CGCM3.1(T47), GISS-ER, MIROC3.2(medres), UKMO-HadCM3) produced using the A2 greenhouse gases emissions scenario. Under projected future climate and atmospheric CO2 concentrations, the simulated vegetation changes result in the contraction of alpine, shrub-steppe, and xeric shrub vegetation across the study area and the expansion of woodland and forest vegetation. Large areas of maritime cool forest and cold forest are simulated to persist under projected future conditions. The fine spatial-scale vegetation simulations resolve patterns of vegetation change that are not visible at coarser resolutions and these fine-scale patterns are particularly important for understanding potential future vegetation changes in topographically complex areas. PMID:26488750
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NASA Astrophysics Data System (ADS)
Brown, I.; Wennbom, M.
2013-12-01
Climate change, population growth and changes in traditional lifestyles have led to instabilities in traditional demarcations between neighboring ethic and religious groups in the Sahel region. This has resulted in a number of conflicts as groups resort to arms to settle disputes. Such disputes often centre on or are justified by competition for resources. The conflict in Darfur has been controversially explained by resource scarcity resulting from climate change. Here we analyse established methods of using satellite imagery to assess vegetation health in Darfur. Multi-decadal time series of observations are available using low spatial resolution visible-near infrared imagery. Typically normalized difference vegetation index (NDVI) analyses are produced to describe changes in vegetation ';greenness' or ';health'. Such approaches have been widely used to evaluate the long term development of vegetation in relation to climate variations across a wide range of environments from the Arctic to the Sahel. These datasets typically measure peak NDVI observed over a given interval and may introduce bias. It is furthermore unclear how the spatial organization of sparse vegetation may affect low resolution NDVI products. We develop and assess alternative measures of vegetation including descriptors of the growing season, wetness and resource availability. Expanding the range of parameters used in the analysis reduces our dependence on peak NDVI. Furthermore, these descriptors provide a better characterization of the growing season than the single NDVI measure. Using multi-sensor data we combine high temporal/moderate spatial resolution data with low temporal/high spatial resolution data to improve the spatial representativity of the observations and to provide improved spatial analysis of vegetation patterns. The approach places the high resolution observations in the NDVI context space using a longer time series of lower resolution imagery. The vegetation descriptors derived are evaluated using independent high spatial resolution datasets that reveal the pattern and health of vegetation at metre scales. We also use climate variables to support the interpretation of these data. We conclude that the spatio-temporal patterns in Darfur vegetation and climate datasets suggest that labelling the conflict a climate-change conflict is inaccurate and premature.
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Channel Patterns as the Result of Self-Organization Within the Flow-Sediment-Vegetation System
NASA Astrophysics Data System (ADS)
Tal, M.; Paola, C.
2003-12-01
The familiar patterns of braided and meandering rivers can be thought of as the result of self-organization within a "three-phase" system comprising fluid, sediment, and vegetation. Interactions between these three components are also largely responsible for the organization of river systems into separate and distinguishable channels and floodplains. Key elements of the self organization include the space and time characteristics of seed dispersal and plant growth as well as the statistics of occupation, abandonment, and reworking of the bed by the flow. Seeds are transported and dispersed readily by wind and water and opportunistically colonize areas of the channel that are abandoned or exposed at low flows. Vegetation increases bank stability through root reinforcement of the sediment and increases the threshold shear stress needed for erosion. In addition, vegetation offers resistance to the flow by increasing the drag and reducing the velocity, thus decreasing the stream power available for erosion and transport. Vegetation that is not removed while young will become stronger and increasingly resistant to erosion and removal by the flow. Thus a key organizing parameter in the flow-sediment-vegetation system is the time scale for establishment of the vegetation relative to a characteristic channel or bed mobility time. Experiments at the St. Anthony Falls Laboratory demonstrate how repeated cycling of vegetation seeding and water discharge changes an unvegetated braided channel morphology: the flow is gradually corralled into a single sinuous channel that largely tracks the thread of maximum velocity in the original braided network. The experiments are carried out in a large unconsolidated sand bed flume in which alfalfa sprouts are used to simulate riparian vegetation and offer the only form of cohesion in the system. An initial braided pattern is allowed to evolve freely in conjunction with alternating high and low discharges and repeated seedings. As the vegetation density and age increase with time, smaller and weaker channels are choked off leaving a single relatively narrow channel with a sinuous thalweg. This channel develops its own internal bar forms with smaller length scales than the original braid bars.
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Dietary patterns in infancy are associated with child diet and weight outcomes at 6 years.
Rose, C M; Birch, L L; Savage, J S
2017-05-01
To assess whether patterns of dietary exposures at 9 months are associated with child diet and weight at 6 years. Data for this study were from the Infant Feeding Practices Study II and Year 6 Follow-Up Studies. All data were self-reported monthly. Results of a previous latent class analysis revealed five dietary patterns varying in milk and solid food intake. These five infant dietary patterns were used in the current study to predict child diet and weight outcomes at 6 years, while controlling for confounding variables. Infants with dietary patterns higher in fruit and vegetable intake at 9 months had higher fruit and vegetable intake at 6 years. Similarly, infants with the dietary pattern characterized by foods high in energy density (that is, French Fries and sweet desserts) continued to have higher consumption of these foods at 6 years, and had a higher prevalence of overweight at 6 years (43%) compared with the other classes. Formula-fed infants had higher sugar-sweetened beverage intake and fewer met the dietary guidelines for fruit and vegetable intake at 6 years than breastfed infants, controlling for factors such as income. Early decisions about milk-feeding, and the types of solid foods offered in infancy can foreshadow dietary patterns and obesity risk later in childhood. Infants who were offered energy-dense foods had higher intake of these foods at 6 years of age.
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Miyake, Yoshihiro; Okubo, Hitomi; Sasaki, Satoshi; Tanaka, Keiko; Hirota, Yoshio
2011-11-01
Maternal diet during pregnancy might influence the development of childhood allergic disorders. This prospective study examined the relationship between maternal dietary patterns during pregnancy and the risk of wheeze and eczema in the offspring aged 16-24 months. Subjects were 763 mother-child pairs. Data on maternal intake during pregnancy were assessed with a diet history questionnaire. Dietary patterns were derived from factor analysis of 33 predefined food groups. Symptoms of wheeze and eczema were based on criteria of the International Study of Asthma and Allergies in Childhood. Adjustment was made for maternal age, gestation, residential municipality, family income, maternal and paternal education, maternal and paternal history of allergic disorders, changes in maternal diet in pregnancy, season at baseline, maternal smoking during pregnancy, baby's older siblings, sex, birth weight, age at the third survey, household smoking, and breastfeeding duration. Three dietary patterns were identified: 'healthy', characterized by high intake of green and yellow vegetables, seaweed, mushrooms, white vegetables, pulses, potatoes, fish, sea products, fruit, and shellfish; 'Western', characterized by high intake of vegetable oil, salt-containing seasonings, beef and pork, processed meat, eggs, chicken, and white vegetables; and 'Japanese', characterized by high intake of rice, miso soup, sea products, and fish. There was a tendency for an inverse exposure-response relationship between the maternal Western pattern during pregnancy and the risk of childhood wheeze by crude analysis. After adjustment for the confounding factors under study, the inverse relationship was strengthened: the adjusted OR between extreme quartiles was 0.59 (95% CI: 0.35-0.98, p for trend = 0.02). No such inverse association was observed for childhood eczema. Neither the maternal healthy pattern nor the Japanese pattern during pregnancy was related to childhood wheeze or eczema. The maternal Western pattern during pregnancy may be preventive against wheeze in the offspring. © 2011 John Wiley & Sons A/S.
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NASA Astrophysics Data System (ADS)
LIU, X.; Xu, Z.; Peng, D.
2017-12-01
Vegetation growth plays a significant role on runoff variation at high altitude, and precipitation and temperature are both key factors affecting vegetation conditions. As one of the greatest international rivers in China, the Yarlung Zangbo River in the southern Qinghai-Tibetan Plateau was selected, and the spatio-temporal patterns of vegetation were analyzed by using NDVI (Normalized Difference Vegetation Index) during 1998 2014. The relationship between NDVI and precipitation as well as temperature was also investigated in this study. Results showed that the value of NDVI increases with the decrease of elevation and the largest value appears in the broadleaf forest cover. Almost all annual NDVI variations exhibit an increasing tendency, particularly for the broadleaf forest cover. On the viewpoint of statistics, only 29% pixels of NDVI with increasing tendency are of significance for the other cover, while for cultivated vegetation cover, around 82% pixels of NDVI were detected with significant increasing tendency. In addition, vegetation growth showed lagging response to precipitation, and the lag time is around one month. Moreover, in the region with elevation over 5000 m, negative relationship between NDVI and precipitation for alpine vegetation was found. Approximately 75% of NDVI variations are dominated by precipitation and temperature. These findings may provide a reference to investigate runoff variations and strengthen ecological protection for similar high-altitude areas in the future.
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NASA Astrophysics Data System (ADS)
Zhang, Hui; Xue, Lianqing; Yang, Changbing; Chen, Xinfang; Zhang, Luochen; Wei, Guanghui
2018-01-01
The Tarim River (TR), as the longest inland river at an arid area in China, is a typical regions of vegetation variation research and plays a crucial role in the sustainable development of regional ecological environment. In this paper, the newest dataset of MODND1M NDVI, at a resolution of 500m, were applied to calculate vegetation index in growing season during the period 2000-2015. Using a vegetation coverage index, a trend line analysis, and the local spatial autocorrelation analysis, this paper investigated the landscape patterns and spatio-temporal variation of vegetation coverage at regional and pixel scales over mainstream of the Tarim River, Xinjiang. The results showed that (1) The bare land area on both sides of Tarim River appeared to have a fluctuated downward trend and there were two obvious valley values in 2005 and 2012. (2) Spatially, the vegetation coverage improved areas is mostly distributed in upstream and the degraded areas is mainly distributed in the left bank of midstream and the end of Tarim River during 2000-2005. (3) The local spatial auto-correlation analysis revealed that vegetation coverage was spatially positive autocorrelated and spatial concentrated. The high-high self-related areas are mainly distributed in upstream, where vegetation cover are relatively good, and the low-low self-related areas are mostly with lower vegetation cover in the lower reaches of Tarim River.
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Climatological determinants of woody cover in Africa.
Good, Stephen P; Caylor, Kelly K
2011-03-22
Determining the factors that influence the distribution of woody vegetation cover and resolving the sensitivity of woody vegetation cover to shifts in environmental forcing are critical steps necessary to predict continental-scale responses of dryland ecosystems to climate change. We use a 6-year satellite data record of fractional woody vegetation cover and an 11-year daily precipitation record to investigate the climatological controls on woody vegetation cover across the African continent. We find that-as opposed to a relationship with only mean annual rainfall-the upper limit of fractional woody vegetation cover is strongly influenced by both the quantity and intensity of rainfall events. Using a set of statistics derived from the seasonal distribution of rainfall, we show that areas with similar seasonal rainfall totals have higher fractional woody cover if the local rainfall climatology consists of frequent, less intense precipitation events. Based on these observations, we develop a generalized response surface between rainfall climatology and maximum woody vegetation cover across the African continent. The normalized local gradient of this response surface is used as an estimator of ecosystem vegetation sensitivity to climatological variation. A comparison between predicted climate sensitivity patterns and observed shifts in both rainfall and vegetation during 2009 reveals both the importance of rainfall climatology in governing how ecosystems respond to interannual fluctuations in climate and the utility of our framework as a means to forecast continental-scale patterns of vegetation shifts in response to future climate change.
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NASA Astrophysics Data System (ADS)
Will, R. M.; Li, A.; Glenn, N. F.; Benner, S. G.; Spaete, L.; Ilangakoon, N. T.
2015-12-01
Soil organic carbon distribution and the factors influencing this distribution are important for understanding carbon stores, vegetation dynamics, and the overall carbon cycle. Linking soil organic carbon (SOC) with aboveground vegetation biomass may provide a method to better understand SOC distribution in semiarid ecosystems. The Reynolds Creek Critical Zone Observatory (RC CZO) in Idaho, USA, is approximately 240 square kilometers and is situated in the semiarid Great Basin of the sagebrush-steppe ecosystem. Full waveform airborne lidar data and Next-Generation Airborne Visible/Infrared Imaging Spectrometer (AVIRIS-ng) collected in 2014 across the RC CZO are used to map vegetation biomass and SOC and then explore the relationships between them. Vegetation biomass is estimated by identifying vegetation species, and quantifying distribution and structure with lidar and integrating the field-measured biomass. Spectral data from AVIRIS-ng are used to differentiate non-photosynthetic vegetation (NPV) and soil, which are commonly confused in semiarid ecosystems. The information from lidar and AVIRIS-ng are then used to predict SOC by partial least squares regression (PLSR). An uncertainty analysis is provided, demonstrating the applicability of these approaches to improving our understanding of the distribution and patterns of SOC across the landscape.
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Urban vegetation and thermal patterns following city growth in different socio-economic contexts
NASA Astrophysics Data System (ADS)
Dronova, I.; Clinton, N.; Yang, J.; Radke, J.; Marx, S. S.; Gong, P.
2015-12-01
Urban expansion accompanied by losses of vegetated spaces and their ecological services raises significant concerns about the future of humans in metropolitan "habitats". Despite recent growth of urban studies globally, it is still not well understood how environmental effects of urbanization vary with the rate and socioeconomic context of development. Our study hypothesized that with urban development, spatial patterns of surface thermal properties and green plant cover would shift towards higher occurrence of relatively warmer and less vegetated spaces such as built-up areas, followed by losses of greener and cooler areas such as urban forests, and that these shifts would be more pronounced with higher rate of economic and/or population growth. To test these ideas, we compared 1992-2011 changes in remotely sensed patterns of green vegetation and surface temperature in three example cities that experienced peripheral growth under contrasting socio-economic context - Dallas, TX, USA, Beijing, China and Kyiv, Ukraine. To assess their transformation, we proposed a metric of thermal-vegetation angle (TVA) estimated from per-pixel proxies of vegetation greenness and surface temperature from Landsat satellite data and examined changes in TVA distributions within each city's core and two decadal zones of peripheral sprawl delineated from nighttime satellite data. We found that higher economic and population growth were coupled with more pronounced changes in TVA distributions, and more urbanized zones often exhibited higher frequencies of warmer, less green than average TVA values with novel patterns such as "cooler" clusters of building shadows. Although greener and cooler spaces generally diminished with development, they remained relatively prevalent in low-density residential areas of Dallas and peripheral zones of Kyiv with exurban subsistence farming. Overall, results indicate that the effects of modified green space and thermal patterns within growing cities highly vary depending on economy, population trends and historical legacies of planned green spaces. Remote sensing-based metrics such as TVA facilitate their comparisons and offer useful strategies to cost-effectively monitor urban transformation and inform more explicit environmental modeling of cities in the future.
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NASA Astrophysics Data System (ADS)
Dodd, N. H.; Baird, A. J.; Wainwright, J.; Dunn, S. M.
2011-12-01
There are obvious surface expressions - in terms of vegetation patterning - of ecohydrological feedbacks on dryland and peatland hillslopes. Much less is known about subsurface ecohydrological patterns, and whether or not they 'map onto' surface patterns. Likewise, few attempts have been made to investigate how such ecohydrological patterns affect whole-hillslope hydrological behaviour or how widespread they are in non-dryland and non-peatland hillslopes. In this study we investigate surface and near- surface patterning in temperate hillslopes, which to date have been the focus of much hydrological work but little ecohydrological work. In particular, we consider the extent to which the direct and the indirect effects of past and present plant assemblages on local and whole-hillslope soil moisture conditions may contribute to patterning. We have conducted a field study of two temperate upland hillslopes in Northern Scotland, UK, on one of which human intervention plays a major part in shaping the landscape. Repeat measurements have been made of near- surface soil-moisture content, taken at lag distances of 0.25 m to 20 m, under different antecedent hydrological conditions together with characterisation of plant assemblages at the same points through both ground-based vegetation surveys of 1 m × 1 m plots and kite aerial photography (KAP) of > 20 m2 plots. Results from this have indicated that changes in ecohydrological patterns can occur over small spatial scales (< 1 m2) and short time scales (< 1 day). Comparison of values of near-surface soil moisture content with topographic wetness indices, calculated using 1 -m resolution topographic data collected in the field, has highlighted that topography does not explain all of the spatial variation in soil moisture content at this scale. KAP images allowed detection of vegetation patterns not obvious from the ground. Comparison of KAP images and historic aerial photographs has highlighted the persistence of vegetation patterns over time at both sites, and that the current structure of the landscape is clearly related to current and past vegetation management practices. Evidence of sustained patterning under relatively steady environmental conditions has prompted us to consider how internal system dynamics such as competition and facilitation between different plant assemblages, and persistence of ecological memory at a range of timescales may lead to a range of ecohydrological behaviours at the scale of whole hillslopes. To help conceptualize ways in which patterning may arise, we have built a two-dimensional cellular automata-type model in which local interactions between biotic and abiotic components have the potential to lead to emergence of larger-scale patterns within the model landscape. Results from the field study have been used to gauge how well temperate hillslope ecohydrological dynamics are represented in our model, and to check that local neighbourhood patterns in the model outputs resemble real-world patterning. Key words: temperate upland ecohydrology, plant assemblage dynamics, ecological memory, kite aerial photography, cellular automata.
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Large scale spontaneous synchronization of cell cycles in amoebae
NASA Astrophysics Data System (ADS)
Segota, Igor; Boulet, Laurent; Franck, Carl
2014-03-01
Unicellular eukaryotic amoebae Dictyostelium discoideum are generally believed to grow in their vegetative state as single cells until starvation, when their collective aspect emerges and they differentiate to form a multicellular slime mold. While major efforts continue to be aimed at their starvation-induced social aspect, our understanding of population dynamics and cell cycle in the vegetative growth phase has remained incomplete. We show that substrate-growtn cell populations spontaneously synchronize their cell cycles within several hours. These collective population-wide cell cycle oscillations span millimeter length scales and can be completely suppressed by washing away putative cell-secreted signals, implying signaling by means of a diffusible growth factor or mitogen. These observations give strong evidence for collective proliferation behavior in the vegetative state and provide opportunities for synchronization theories beyond classic Kuramoto models.
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Spontaneous emergence of large-scale cell cycle synchronization in amoeba colonies
NASA Astrophysics Data System (ADS)
Segota, Igor; Boulet, Laurent; Franck, David; Franck, Carl
2014-06-01
Unicellular eukaryotic amoebae Dictyostelium discoideum are generally believed to grow in their vegetative state as single cells until starvation, when their collective aspect emerges and they differentiate to form a multicellular slime mold. While major efforts continue to be aimed at their starvation-induced social aspect, our understanding of population dynamics and cell cycle in the vegetative growth phase has remained incomplete. Here we show that cell populations grown on a substrate spontaneously synchronize their cell cycles within several hours. These collective population-wide cell cycle oscillations span millimeter length scales and can be completely suppressed by washing away putative cell-secreted signals, implying signaling by means of a diffusible growth factor or mitogen. These observations give strong evidence for collective proliferation behavior in the vegetative state.
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Zivkovic, Danica; Créton, Robbert; Dohmen, René
1991-08-01
During the first four mitotic division cycles of Lymnaea stagnalis embryos, we have detected cell cycle-dependent changes in the pattern of transcellular ionic currents and membrane-bound Ca 2+ -stimulated ATPase activity. Ionic currents ranging from 0.05 to 2.50 μA/cm 2 have been measured using the vibrating probe technique. Enzyme activity was detected using Ando's cytochemical method (Ando et al. 1981) which reveals Ca 2+ /Mg 2+ ATPase localization at the ultrastructural level, and under high-stringency conditions with respect to calcium availability, it reveals Ca 2+ -stimulated ATPase. The ionic currents and Ca 2+ -stimulated ATPase localization have in common that important changes occur during the M-phase of the cell cycles. Minimal outward current at the vegetal pole coincides with metaphase/anaphase. Maximal inward current at the animal pole coincides with the onset of cytokinesis at that pole. Ca 2+ -stimulated ATPase is absent from one half of the embryo at metaphase/anaphase of the two- and four-cell stage, whereas it is present in all cells during the remaining part of the cell cycle. Since fluctuations of cytosolic free calcium concentrations appear to correlate with both karyokinesis and cytokinesis, we speculate that part of the cyclic pattern of Ca 2+ -stimulated ATPase localization and of the transcellular ionic currents reflects the elevation of cytosolic free calcium concentration during the M-phase.
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White Vegetables: A Forgotten Source of Nutrients: Purdue Roundtable Executive Summary12
Weaver, Connie; Marr, Elizabeth T.
2013-01-01
Purdue University convened a scientific roundtable, “White Vegetables: A Forgotten Source of Nutrients,” in Chicago, IL, June 18–19, 2012, to bring together experts to address the contributions of white vegetables, including potatoes, as sources of key nutrients and other microconstituents within a dietary pattern supporting health and wellness. This paper summarizes the meeting and supplement papers, including discussion among participants. The group of researchers identified areas of ambiguity regarding classification of vegetables for research and dietary guidance, future research needs, and the imperative to draw on that research to enhance evidence-based dietary guidance about white vegetables, including potatoes. U.S. dietary guidance encourages consumption of a variety of fruits and vegetables, including at least 1 serving of a dark green and 1 orange vegetable daily. However, no such recommendation exists for white vegetables, such as potatoes, cauliflowers, turnips, onions, parsnips, mushrooms, corn, and kohlrabi. Vegetable subgrouping approaches need to be considered in the context of nutrients of concern and low fruits and vegetable consumption. This Roundtable and supplement provide a substantial body of evidence to demonstrate how the inclusion of white vegetables, such as potatoes, can increase shortfall nutrients, notably fiber, potassium, and magnesium, as well as help increase overall vegetable consumption among children, teens, and adults in the United States. In so doing, these increases can help consumers to effectively and economically meet the recommended 2010 Dietary Guidelines for Americans vegetable servings and improve nutrient intake for all age and sex categories. Although inclusion of many types of vegetables in the diet improves nutritional adequacy, a priority public health message is to increase vegetable consumption. Potatoes appear to be a pathway to increased vegetable consumption, thereby helping to meet the recommended 2010 Dietary Guidelines for Americans servings for vegetables provided the forms served limit the amount of added salt and fat. Potatoes, in all forms, when consumed in MyPlate serving sizes, can be part of health-promoting dietary patterns. More research is needed to determine the health contributions of white vegetables as a source of nutrients and bioactive constituents and their bioavailability beyond the isolated components. PMID:23674800
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Seasonal variations in phosphorus fractions in semiarid sandy soils under different vegetation types
Qiong Zhao; Dehui Zeng; Zhiping Fan; Zhanyuan Yu; Yalin Hu; Jianwei Zhang
2009-01-01
We investigated the seasonal patterns of soil phosphorus (P) fractions under five vegetation types – Ulmus macrocarpa savanna, grassland, Pinus sylvestris var. mongolica plantation, Pinus tabulaeformis plantation, and Populus simonii plantation ...
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Doughty, David M.; Hunter, Ryan C.; Summons, Roger E.; Newman, Dianne K.
2010-01-01
2-Methylhopanes, molecular fossils of 2-methylbacteriohopanepolyol (2-MeBHP) lipids, have been proposed as biomarkers for cyanobacteria, and by extension, oxygenic photosynthesis. However, the robustness of this interpretation is unclear, as 2-methylhopanoids occur in organisms besides cyanobacteria and their physiological functions are unknown. As a first step towards understanding the role of 2-MeBHP in cyanobacteria, we examined the expression and intercellular localization of hopanoids in the three cell types of Nostoc punctiforme: vegetative cells, akinetes, and heterocysts. Cultures in which N. punctiforme had differentiated into akinetes contained approximately 10-fold higher concentrations of 2-methylhopanoids than did cultures that contained only vegetative cells. In contrast, 2-methylhopanoids were only present at very low concentrations in heterocysts. Hopanoid production initially increased 3-fold in cells starved of nitrogen but returned to levels consistent with vegetative cells within two weeks. Vegetative and akinete cell types were separated into cytoplasmic, thylakoid, and outer membrane fractions; the increase in hopanoid expression observed in akinetes was due to a 34-fold enrichment of hopanoid content in their outer membrane relative to vegetative cells. Akinetes formed in response either to low light or phosphorus limitation, exhibited the same 2-methylhopanoid localization and concentration, demonstrating that 2-methylhopanoids are associated with the akinete cell type per se. Because akinetes are resting cells that are not photosynthetically active, 2-methylhopanoids cannot be functionally linked to oxygenic photosyntheis in N. punctiforme. PMID:19811542
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Lucas, R; Grande, M A J; Abriouel, H; Maqueda, M; Ben Omar, N; Valdivia, E; Martínez-Cañamero, M; Gálvez, A
2006-10-01
The enterococcal bacteriocin (enterocin) AS-48 is a broad-spectrum cyclic peptide. Enterocin AS-48 was tested against Bacillus coagulans in three vegetable canned foods: tomato paste (pH 4.64), syrup from canned peaches (pH 3.97), and juice from canned pineapple (pH 3.65). When vegetative cells of B. coagulans CECT (Spanish Type Culture Collection) 12 were inoculated in tomato paste supplemented with 6 microg/ml AS-48 and stored at different temperatures, viable cell counts were reduced by approximately 2.37 (4 degrees C), 4.3 (22 degrees C) and 3.0 (37 degrees C) log units within 24 h storage. After 15-days storage, no viable cells were detected in any sample. Strain B. coagulans CECT 561 showed a poor survival in tomato paste, but surviving cells were also killed by AS-48. The bacteriocin was also very active against B. coagulans CECT 12 vegetative cells in juice from canned pineapple stored at 22 degrees C, and slightly less active in syrup from canned peaches. In food samples supplemented with 1.5% lactic acid, enterocin AS-48 (6 microg/ml) rapidly reduced viable counts of vegetative cells below detection limits within 24 h storage. Addition of glucose and sucrose (10% and 20%) significantly increased bacteriocin activity against vegetative cells of B. coagulans CECT 12. Enterocin AS-48 had no significant effect on B. coagulans CECT 12 spores. However, the combined application of AS-48 and heat (80-95 degrees C for 5 min) significantly increased the effect of thermal treatments on spores.
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Wavelength selection beyond turing
NASA Astrophysics Data System (ADS)
Zelnik, Yuval R.; Tzuk, Omer
2017-06-01
Spatial patterns arising spontaneously due to internal processes are ubiquitous in nature, varying from periodic patterns of dryland vegetation to complex structures of bacterial colonies. Many of these patterns can be explained in the context of a Turing instability, where patterns emerge due to two locally interacting components that diffuse with different speeds in the medium. Turing patterns are multistable, meaning that many different patterns with different wavelengths are possible for the same set of parameters. Nevertheless, in a given region typically only one such wavelength is dominant. In the Turing instability region, random initial conditions will mostly lead to a wavelength that is similar to that of the leading eigenvector that arises from the linear stability analysis, but when venturing beyond, little is known about the pattern that will emerge. Using dryland vegetation as a case study, we use different models of drylands ecosystems to study the wavelength pattern that is selected in various scenarios beyond the Turing instability region, focusing on the phenomena of localized states and repeated local disturbances.
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Leighton, Patrick A; Horrocks, Julia A; Krueger, Barry H; Beggs, Jennifer A; Kramer, Donald L
2008-11-07
Because species respond differently to habitat boundaries and spatial overlap affects encounter rates, edge responses should be strong determinants of spatial patterns of species interactions. In the Caribbean, mongooses (Herpestes javanicus) prey on hawksbill sea turtle (Eretmochelys imbricata) eggs. Turtles nest in both open sand and vegetation patches, with a peak in nest abundance near the boundary between the two microhabitats; mongooses rarely leave vegetation. Using both artificial nests and hawksbill nesting data, we examined how the edge responses of these species predict the spatial patterns of nest mortality. Predation risk was strongly related to mongoose abundance but was not affected by nest density or habitat type. The product of predator and prey edge response functions accurately described the observed pattern of total prey mortality. Hawksbill preference for vegetation edge becomes an ecological trap in the presence of mongooses. This is the first study to predict patterns of predation directly from continuous edge response functions of interacting species, establishing a link between models of edge response and species interactions.
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Leighton, Patrick A; Horrocks, Julia A; Krueger, Barry H; Beggs, Jennifer A; Kramer, Donald L
2008-01-01
Because species respond differently to habitat boundaries and spatial overlap affects encounter rates, edge responses should be strong determinants of spatial patterns of species interactions. In the Caribbean, mongooses (Herpestes javanicus) prey on hawksbill sea turtle (Eretmochelys imbricata) eggs. Turtles nest in both open sand and vegetation patches, with a peak in nest abundance near the boundary between the two microhabitats; mongooses rarely leave vegetation. Using both artificial nests and hawksbill nesting data, we examined how the edge responses of these species predict the spatial patterns of nest mortality. Predation risk was strongly related to mongoose abundance but was not affected by nest density or habitat type. The product of predator and prey edge response functions accurately described the observed pattern of total prey mortality. Hawksbill preference for vegetation edge becomes an ecological trap in the presence of mongooses. This is the first study to predict patterns of predation directly from continuous edge response functions of interacting species, establishing a link between models of edge response and species interactions. PMID:18647718
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Lu Hao; Cen Pan; Peilong Liu; Decheng Zhou; Liangxia Zhang; Zhe Xiong; Yongqiang Liu; Ge Sun
2016-01-01
Accurate detection and quantification of vegetation dynamics and drivers of observed climatic and anthropogenic change in space and time is fundamental for our understanding of the atmosphereâbiosphere interactions at local and global scales. This case study examined the coupled spatial patterns of vegetation dynamics and climatic variabilities during the past...
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ERIC Educational Resources Information Center
Handforth, Kellyn M.; Gilboy, Mary Beth; Harris, Jeffrey; Melia, Nicole
2016-01-01
Purpose/Objectives: The purpose of this project was to assess fruit and vegetable plate waste, examine patterns of selection and consumption of specific fruit and vegetable subgroups, and analyze for differences across gender, grade level, and school. Methods: A previously-validated digital photography method was used to collect plate waste data…
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Comparison of North and South American biomes from AVHRR observations
NASA Technical Reports Server (NTRS)
Goward, Samuel N.; Dye, Dennis; Kerber, Arlene; Kalb, Virginia
1987-01-01
Previous analysis of the North American continent with AVHRR-derived vegetation index measurements showed a strong relation between known patterns of vegetation seasonality, productivity and the spectral vegetation index measurements. This study extends that analysis to South America to evaluate the degree to which these findings extend to tropical regions. The results show that the spectral vegetation index measurements provide a general indicator of vegetation activity across the major biomes of the Western Hemisphere of the earth, including tropical regions. The satellite-observed patterns are strongly related to the known climatology of the continents and may offer a means to improve understanding of global bioclimatology. For example, South America is shown to have a longer growing season with much earlier spring green-up than North America. The time integral of the measurements, computed from 12 composited monthly values, produces a value that is related to published net primary productivity data. However, limited net primary production data does not allow complete evaluation of satellite-observed contrasts between North and South American biomes. These results suggest that satellite-derived spectral vegetation index measurements are of great potential value in improving knowledge of the earth's biosphere.
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Cairo, Egypt/Nile River viewed from STS-66 Atlantis
1994-11-14
This close-up view of the intensively cultivated Nile River flood plain near Cairo presents a sharp color contrast to the virtually non-vegetated, sandy desert, located to the west of the vegetated area. Some rectangular cultivated field patterns, as well as circular center pivot irrigation patterns, can be observed northwest of the Nile River flood plain. The world famous Giza Pyramids are located near the center of this photography (see highly reflective sand surfaces).
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Zhang, Tianyi; Wang, Hesong
2015-01-01
We identified the spatiotemporal patterns of the Normalized Difference Vegetation Index (NDVI) for the years 1982–2008 in the desert areas of Northwest China and quantified the impacts of climate and non-climate factors on NDVI changes. The results indicate that although the mean NDVI has improved in 24.7% of the study region; 16.3% among the region has been stagnating in recent years and only 8.4% had a significantly increasing trend. Additionally, 45.3% of the region has maintained a stable trend over the study period and 30.0% has declined. A multiple regression model suggests that a wetter climate (quantified by the Palmer Drought Severity Index, PDSI) is associated with higher NDVI in most areas (18.1% of significance) but these historical changes in PDSI only caused an average improvement of approximately 0.4% over the study region. Contrasting the regression results under different trend patterns, no significant differences in PDSI impacts were detected among the four trend patterns. Therefore, we conclude that climate is not the primary driver for vegetative coverage in Northwest China. Future studies will be required to identify the impacts of specific non-climatic factors on vegetative coverage based on high-resolution data, which will be beneficial in creating an effective strategy to combat the recent desertification trend in China. PMID:25961563
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Gurdon, J B; Fairman, S; Mohun, T J; Brennan, S
1985-07-01
Muscle gene expression is induced a few hours after vegetal cells of a Xenopus blastula are placed in contact with animal cells that normally develop into epidermis and nerve cells. We have used a muscle-specific actin gene probe to determine the timing of gene activation in animal-vegetal conjugates. Muscle actin RNA is first transcribed in a minority of animal cells at a stage equivalent to late gastrula. The time of muscle gene activation is determined by the developmental stage of the responding (animal) cells, and not by the time when cells are first placed in contact. The minimal cell contact time required for induction is between 1 1/2 and 2 1/2 hr, and the minimal time for gene activation after induction is 5-7 hr.
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Cardoso, Letícia de Oliveira; Carvalho, Marilia Sá; Cruz, Oswaldo Gonçalves; Melere, Cristiane; Luft, Vivian Cristine; Molina, Maria Del Carmen Bisi; Faria, Carolina Perim de; Benseñor, Isabela M; Matos, Sheila Maria Alvim; Fonseca, Maria de Jesus Mendes da; Griep, Rosane Harter; Chor, Dóra
2016-01-01
The food consumption of 15,071 public employees was analyzed in six Brazilian cities participating in the baseline for Brazilian Longitudinal Study of Adult Health (ELSA-Brasil, 2008-2010) with the aim of identifying eating patterns and their relationship to socio-demographic variables. Multiple correspondence and cluster analysis were applied. Four patterns were identified, with their respective frequencies: "traditional" (48%); "fruits and vegetables" (25%); "pastry shop" (24%); and "diet/light" (5%) The "traditional" and "pastry shop" patterns were more frequent among men, younger individuals, and those with less schooling. "Fruits and vegetables" and "diet/light" were more frequent in women, older individuals, and those with more schooling. Our findings show the inclusion of new items in the "traditional" pattern and the appearance of the "low sugar/low fat" pattern among the eating habits of Brazilian workers, and signal socio-demographic and regional differences.
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Riparian vegetation controls on channels formed in non-cohesive sediment
NASA Astrophysics Data System (ADS)
Gran, K.; Tal, M.; Paola, C.
2002-05-01
Riparian vegetation can significantly influence the morphology of a river, affecting channel geometry and flow dynamics. In channels formed in non-cohesive material, vegetation is the main source of bank cohesion and could affect the overall behavior of the river, potentially constraining the flow from a multi-thread channel to a single-thread channel. To examine the effects of riparian vegetation on streams formed in non-cohesive material, we conducted a series of physical experiments at the St. Anthony Falls Laboratory. The first set of experiments examines the effects of varying densities of vegetation on braided stream dynamics. Water discharge, sediment discharge, and grain size were held constant. For each run, we allowed a braided system to develop, then halved the discharge, and seeded the flume with alfalfa (Medicago sativa). After ten to fourteen days of growth, we returned the discharge to its original value and continued the run for 30-36 hours. Our results show that the influence of vegetation on the overall river pattern varied systematically with the spatial density of plant stems. The vegetation reduced the number of active channels and increased bank stability, leading to lower lateral migration rates, narrower and deeper channels, and an increase in channel relief. All these effects increased with vegetation density. Vegetation also influenced flow dynamics, increasing the variance of flow direction in the vegetated runs, and increasing scour depths through strong downwelling where the flow collided with relatively resistant banks. This oblique bank collision provides a new mechanism for producing secondary flows. We found these bank collision driven secondary flows to be more important than the classical curvature-driven mechanism in the vegetated runs. The next set of experiments examines more closely how the channel pattern evolves through time, allowing for both channel migration and successive vegetation growth. In these on-going experiments, vegetation is reseeded following repeat high flow events, simulating the natural process of vegetation encroachment on the floodplain and channel.
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Evolutionarily conserved phenylpropanoid pattern on angiosperm pollen.
Fellenberg, Christin; Vogt, Thomas
2015-04-01
The male gametophyte of higher plants appears as a solid box containing the essentials to transmit genetic material to the next generation. These consist of haploid generative cells that are required for reproduction, and an invasive vegetative cell producing the pollen tube, both mechanically protected by a rigid polymer, the pollen wall, and surrounded by a hydrophobic pollen coat. This coat mediates the direct contact to the biotic and abiotic environments. It contains a mixture of compounds required not only for fertilization but also for protection against biotic and abiotic stressors. Among its metabolites, the structural characteristics of two types of phenylpropanoids, hydroxycinnamic acid amides and flavonol glycosides, are highly conserved in Angiosperm pollen. Structural and functional aspects of these compounds will be discussed. Copyright © 2015 Elsevier Ltd. All rights reserved.
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NASA Astrophysics Data System (ADS)
Hughes, M. L.; McDowell, P. F.
2017-12-01
The Umatilla River of northeastern Oregon is a gravel-bedded, mixed pattern, salmonid-bearing channel-floodplain system typical of the Interior Columbia River Basin. Efforts to restore native salmonids in this region since the 1980's coupled with increased scrutiny of flood- and erosion-control activities have prompted a need for better understanding of the biogemorphic implications of flood disturbances. The goals of this study are: (1) to re-examine results of earlier studies of flood impacts on the Umatilla River in light of more recent flow records, and (2) to investigate the degree to which large floods have influenced existing patterns of channel-floodplain geomorphology and vegetation. Mapping of flowing channels, bars, scoured surfaces, and vegetation within the active channel from of aerial photos bracketing flood and inter-flood periods since 1964 indicates complex and spatially variable channel changes. In general, channel scour was the most consistent response to flooding. The direction (gain/loss) and magnitude of changes in bars and vegetation within the active channel, as well as the amount of lateral channel movement and changes in sinuosity, were generally inconsistent across flood events. The removal of vegetation by scour during floods was in many areas compensated by the capture of vegetation from the floodplain by avulsion and activation of secondary channels. To date, the geomorphic impacts of the 1964-65 flood-of-record have not been replicated, despite an overall increase in the frequency of smaller floods. Expansion of riparian vegetation in recent decades has mainly occurred in areas disturbed by scour and bar deposition during the 1964-65 floods. Vegetative succession during this period has caused contraction of the active channel such that it now appears much as it did before the 1964-65 floods. These results underscore the importance of large floods as drivers of biogeormphic processes and patterns over timescales relevant to river management and restoration.
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Effects Of Spatial Variability In Marshes On Coastal Erosion Under Storm Conditions
NASA Astrophysics Data System (ADS)
Lunghino, B.; Suckale, J.; Fringer, O. B.; Maldonado, S.; Ferreira, C.; Marras, S.; Mandel, T.
2016-12-01
To quantify the contribution of marshes in protecting coastlines, engineers and planners need to evaluate how variability in marsh characteristics and storm conditions affect erosion in the inundation zone. Previous studies show that spatial patterns in marshes significantly affect flow and sediment transport under normal tidal conditions [1, 2]. This study investigates the effect of spatial variability on floodplain sediment transport under a range of extreme hydrodynamic conditions that occur during storm events. We model the hydrodynamics of storm surge conditions on an idealized coastal floodplain by solving the 2D shallow water equations. We approximate the effect of vegetation on hydrodynamics as a constant drag coefficient. The model calculates suspended sediment transport with the advection-diffusion equation and updates morphology with erosional and depositional fluxes. We conduct numerical experiments in which we vary both the scale of the storm event and the spatial patterns of vegetation and evaluate the impact on erosion and deposition on the floodplain. We find that the alongshore extent of the vegetation is the primary control on the net volume of sediment eroded. Scour occurs in narrow channels between vegetated areas, but this does not significantly alter the net volume of sediment transported. Deposition occurs in vegetated areas under the full range of flow velocities we test. These results suggest that resolving all variability in vegetation is not necessary to quantify net sediment transport volumes at the floodplain scale. Increasing the scale of the storm event does not alter the role of spatial variability. References [1] Meire, D. W., Kondziolka, J. M., and Nepf, H. M. Interaction between neighboring vegetation patches: Impact on flow and deposition. Water Resources Research 50, 5 (2014), 3809-3825. [2] Temmerman, S., Bouma, T., Govers, G., Wang, Z., De Vries, M., and Her- man, P. Impact of vegetation on flow routing and sedimentation patterns: Three-dimensional modeling for a tidal marsh. Journal of Geophysical Research: Earth Surface 110, F4 (2005).
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Aspect-related Vegetation Differences Amplify Soil Moisture Variability in Semiarid Landscapes
NASA Astrophysics Data System (ADS)
Yetemen, O.; Srivastava, A.; Kumari, N.; Saco, P. M.
2017-12-01
Soil moisture variability (SMV) in semiarid landscapes is affected by vegetation, soil texture, climate, aspect, and topography. The heterogeneity in vegetation cover that results from the effects of microclimate, terrain attributes (slope gradient, aspect, drainage area etc.), soil properties, and spatial variability in precipitation have been reported to act as the dominant factors modulating SMV in semiarid ecosystems. However, the role of hillslope aspect in SMV, though reported in many field studies, has not received the same degree of attention probably due to the lack of extensive large datasets. Numerical simulations can then be used to elucidate the contribution of aspect-driven vegetation patterns to this variability. In this work, we perform a sensitivity analysis to study on variables driving SMV using the CHILD landscape evolution model equipped with a spatially-distributed solar-radiation component that couples vegetation dynamics and surface hydrology. To explore how aspect-driven vegetation heterogeneity contributes to the SMV, CHILD was run using a range of parameters selected to reflect different scenarios (from uniform to heterogeneous vegetation cover). Throughout the simulations, the spatial distribution of soil moisture and vegetation cover are computed to estimate the corresponding coefficients of variation. Under the uniform spatial precipitation forcing and uniform soil properties, the factors affecting the spatial distribution of solar insolation are found to play a key role in the SMV through the emergence of aspect-driven vegetation patterns. Hence, factors such as catchment gradient, aspect, and latitude, define water stress and vegetation growth, and in turn affect the available soil moisture content. Interestingly, changes in soil properties (porosity, root depth, and pore-size distribution) over the domain are not as effective as the other factors. These findings show that the factors associated to aspect-related vegetation differences amplify the soil moisture variability of semi-arid landscapes.
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Park, Song-Yi; Murphy, Suzanne P; Wilkens, Lynne R; Yamamoto, Jennifer F; Sharma, Sangita; Hankin, Jean H; Henderson, Brian E; Kolonel, Laurence N
2005-04-01
Dietary patterns have been used to identify typical combinations of foods that may be associated with disease risks. We defined dietary patterns among 195,298 participants of the Multiethnic Cohort Study in Hawaii and Los Angeles in 1993-1996. Intakes of Food Guide Pyramid groups were calculated from a quantitative FFQ for subjects of 5 ethnic groups (African Americans, Hawaiians, Japanese Americans, Latinos, and whites). Three distinct dietary patterns, "Fat and Meat," "Vegetables," and "Fruit and Milk," were identified by exploratory factor analysis with a varimax rotation and validated by confirmatory factor analysis. Similar factor loadings were found for each of 10 ethnic-gender groups in stratified analyses. The odds ratios (OR) for being above the median scores for each factor were calculated. Age, gender, and ethnicity had relatively strong associations with dietary patterns whereas education showed only weak associations. BMI > or = 30 was strongly positively associated with the Fat and Meat pattern (OR = 2.14, 95% CI: 2.08-2.20, vs. BMI < 25). Current smokers showed a positive association with the Fat and Meat pattern (OR = 1.67, CI: 1.62-1.72, vs. nonsmokers) and inverse associations with the Vegetables (OR = 0.66, CI: 0.64-0.68) and Fruit and Milk patterns (OR = 0.53, CI: 0.52-0.55). Physical activity was positively associated with the Vegetables and Fruit and Milk patterns but not with the Fat and Meat pattern. These findings support the hypothesis that dietary patterns are influenced by interrelated sociocultural, demographic, and other lifestyle factors and may be useful in investigations of diet-disease relations.
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Territory and nest site selection patterns by Grasshopper Sparrows in southeastern Arizona
Ruth, Janet M.; Skagen, Susan K.
2017-01-01
Grassland bird populations are showing some of the greatest rates of decline of any North American birds, prompting measures to protect and improve important habitat. We assessed how vegetation structure and composition, habitat features often targeted for management, affected territory and nest site selection by Grasshopper Sparrows (Ammodramus savannarum ammolegus) in southeastern Arizona. To identify features important to males establishing territories, we compared vegetation characteristics of known territories and random samples on 2 sites over 5 years. We examined habitat selection patterns of females by comparing characteristics of nest sites with territories over 3 years. Males selected territories in areas of sparser vegetation structure and more tall shrubs (>2 m) than random plots on the site with low shrub densities. Males did not select territories based on the proportion of exotic grasses. Females generally located nest sites in areas with lower small shrub (1–2 m tall) densities than territories overall when possible and preferentially selected native grasses for nest construction. Whether habitat selection was apparent depended upon the range of vegetation structure that was available. We identified an upper threshold above which grass structure seemed to be too high and dense for Grasshopper Sparrows. Our results suggest that some management that reduces vegetative structure may benefit this species in desert grasslands at the nest and territory scale. However, we did not assess initial male habitat selection at a broader landscape scale where their selection patterns may be different and could be influenced by vegetation density and structure outside the range of values sampled in this study.
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Seasonal habitat use and selection by grizzly bears in Northern British Columbia
Milakovic, B.; Parker, K.L.; Gustine, D.D.; Lay, R.J.; Walker, A.B.D.; Gillingham, M.P.
2012-01-01
We defined patterns of habitat use and selection by female grizzly bears (Ursus arctos) in the Besa-Prophet watershed of northern British Columbia. We fitted 13 adult females with Geographic Positioning System (GPS) radio-collars and monitored them between 2001 and 2004. We examined patterns of habitat selection by grizzly bears relative to topographical attributes and 3 potential surrogates of food availability: land-cover class, vegetation biomass or quality (as measured by the Normalized Difference Vegetation Index), and selection value for prey species themselves (moose [Alces alces], elk [Cervus elaphus], woodland caribou [Rangifer tarandus], Stone's sheep [Ovis dalli stonei]). Although vegetation biomass and quality, and selection values for prey were important in seasonal selection by some individual bears, land-cover class, elevation, aspect, and vegetation diversity most influenced patterns of habitat selection across grizzly bears, which rely on availability of plant foods and encounters with ungulate prey. Grizzly bears as a group avoided conifer stands and areas of low vegetation diversity, and selected for burned land-cover classes and high vegetation diversity across seasons. They also selected mid elevations from what was available within seasonal ranges. Quantifying relative use of different attributes helped place selection patterns within the context of the landscape. Grizzly bears used higher elevations (1,595??31 m SE) in spring and lower elevations (1,436??27 m) in fall; the range of average elevations used among individuals was highest (500 m) during the summer. During all seasons, grizzly bears most frequented aspects with high solar gain. Use was distributed across 10 land-cover classes and depended on season. Management and conservation actions must maintain a diverse habitat matrix distributed across a large elevational gradient to ensure persistence of grizzly bears as levels of human access increase in the northern Rocky Mountains. ?? 2011 The Wildlife Society. Copyright ?? The Wildlife Society, 2011.
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On the use of satellite VEGETATION time series for monitoring post fire vegetation recovery
NASA Astrophysics Data System (ADS)
de Santis, F.; Didonna, I.
2009-04-01
Fire is one of the most critical factors of disturbance in worldwide ecosystems. The effects of fires on soil, plants, landscape and ecosystems depend on many factors, among them fire frequency, fire severity and plant resistance. The characterization of vegetation post-fire behaviour is a fundamental issue to model and evaluate the fire resilience, which the ability of vegetation to recover after fire. Recent changes in fire regime, due to abandonment of local land use practice and climate change, can induce significant variations in vegetation fire resilience. In the Mediterranean-type communities, post fire vegetation trends have been analysed in a wide range of habitats, although pre- and post-fire investigation has been widely performed at stand level. But, factors controlling regeneration at the landscape scale are less well known. In this study, a time series of normalized difference vegetation index (NDVI) data derived from SPOT-VEGETATION was used to examine the recovery characteristics of fire affected vegetation in some test areas of the Mediterranean ecosystems of Southern Italy. The vegetation indices operate by contrasting intense chlorophyll pigment absorption in the red against the high reflectance of leaf mesophyll in the near infrared. SPOT-VEGETATION Normalized Difference Vegetation Index (NDVI) data from 1998 to 2005 were analyzed in order to evaluate the resilient effects in a some significant test sites of southern Italy. In particular, we considered: (i) one stable area site, one site affected by one fire during the investigated time window, (iii) one site affected by two consecutive fires during the investigated time window. In order to eliminate the phenological fluctuations, for each decadal composition of each pixel, we focused on the departure NDVId = [NDVI -
]/, where is the decadal mean and is the decadal standard deviation. The decadal mean and the standard deviation were calculated for each decade, e.g. 1st decade of January, by averaging over all years in the record. We analyzed both: 1) Time variation of NDVI from 1998 to 2005 of pixels for the fire affected and fire unaffected areas. 2) Post-fire NDVI spatial patterns on each image date were compared to the pre-fire pattern to determine the extent to which the pre-fire pattern was re-established, and the rate of this recovery. Results show the ability of vegetation to recovery after a single fire. Nevertheless, such ability can be strongly reduced by successive fires. The recursive fire occurrence can significantly diminish the green biomass especially when disturbances occur at short intervals of time. -
Hanschen, Franziska S; Herz, Corinna; Schlotz, Nina; Kupke, Franziska; Bartolomé Rodríguez, María M; Schreiner, Monika; Rohn, Sascha; Lamy, Evelyn
2015-11-01
Glucosinolates are secondary metabolites present in Brassica vegetables. Alkenyl glucosinolates are enzymatically degraded forming nitriles or isothiocyanates, but in the presence of epithiospecifier protein, epithionitriles are released. However, studies on the occurrence of epithionitriles in Brassica food and knowledge about their biological effects are scarce. Epithionitrile formation from glucosinolates of seven Brassica vegetables was analyzed using GC-MS and HPLC-DAD. Bioactivity of synthetic and plant-derived 1-cyano-2,3-epithiopropane (CETP) - the predominant epithionitrile in Brassica vegetables - in three human hepatocellular carcinoma (HCC) cell lines and primary murine hepatocytes was also evaluated. The majority of the Brassica vegetables were producers of nitriles or epithionitriles as hydrolysis products and not of isothiocyanates. For example, Brussels sprouts and savoy cabbage contained up to 0.8 μmol CETP/g vegetable. Using formazan dye assays, concentrations of 380-1500 nM CETP were observed to inhibit the mitochondrial dehydrogenase activity of human HCC cells without impairment of cell growth. At 100-fold higher CETP concentrations, cell death was observed. Presence of plant matrix increased CETP-based toxicity. These in vitro data provide no indication that epithionitriles will severely affect human health by Brassica consumption. In contrast to isothiocyanates, no evidence of selective toxicity against HCC cells was found. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
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Promotion of stem cell proliferation by vegetable peptone.
Lee, J; Lee, J; Hwang, H; Jung, E; Huh, S; Hyun, J; Park, D
2009-10-01
Technical limitations and evolution of therapeutic applications for cell culture-derived products have accelerated elimination of animal-derived constituents from such products to minimize inadvertent introduction of microbial contaminants, such as fungi, bacteria or viruses. The study described here was conducted to investigate the proliferative effect of vegetable peptone on adult stem cells in the absence of serum, and its possible mechanisms of action. Cell viability and proliferation were determined using the MTT assay and Click-iT EdU flow cytometry, respectively. In addition, changes in expression of cytokine genes were analysed using MILLIPLEX human cytokine enzyme-linked immunosorbent assay kit. Viability of cord blood-derived mesenchymal stem cells (CB-MSC) and adipose tissue-derived stem cells (ADSC) increased significantly when treated with the peptone. In addition, median value of the group treated with peptone shifted to the right when compared to the untreated control group. Furthermore, quantitative analysis of the cytokines revealed that production of vascular endothelial growth factor (VEGF), transforming growth factor-beta1 (TGF-beta1), and interleukin-6 (IL-6) increased significantly in response to treatment with our vegetable peptone in both CB-MSCs and ADSCs. Our findings revealed that the vegetable peptone promotes proliferation of CB-MSCs and ADSCs. In addition, results of this study suggest that induction of stem cell proliferation by vegetable peptone is likely to be related to its induction of VEGF, TGF-beta1, and IL-6 expression.
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NASA Astrophysics Data System (ADS)
Erfanifard, Y.; Rezayan, F.
2014-10-01
Vegetation heterogeneity biases second-order summary statistics, e.g., Ripley's K-function, applied for spatial pattern analysis in ecology. Second-order investigation based on Ripley's K-function and related statistics (i.e., L- and pair correlation function g) is widely used in ecology to develop hypothesis on underlying processes by characterizing spatial patterns of vegetation. The aim of this study was to demonstrate effects of underlying heterogeneity of wild pistachio (Pistacia atlantica Desf.) trees on the second-order summary statistics of point pattern analysis in a part of Zagros woodlands, Iran. The spatial distribution of 431 wild pistachio trees was accurately mapped in a 40 ha stand in the Wild Pistachio & Almond Research Site, Fars province, Iran. Three commonly used second-order summary statistics (i.e., K-, L-, and g-functions) were applied to analyse their spatial pattern. The two-sample Kolmogorov-Smirnov goodness-of-fit test showed that the observed pattern significantly followed an inhomogeneous Poisson process null model in the study region. The results also showed that heterogeneous pattern of wild pistachio trees biased the homogeneous form of K-, L-, and g-functions, demonstrating a stronger aggregation of the trees at the scales of 0-50 m than actually existed and an aggregation at scales of 150-200 m, while regularly distributed. Consequently, we showed that heterogeneity of point patterns may bias the results of homogeneous second-order summary statistics and we also suggested applying inhomogeneous summary statistics with related null models for spatial pattern analysis of heterogeneous vegetations.
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Identification and reproducibility of dietary patterns in a Danish cohort: the Inter99 study.
Lau, Cathrine; Glümer, Charlotte; Toft, Ulla; Tetens, Inge; Carstensen, Bendix; Jørgensen, Torben; Borch-Johnsen, Knut
2008-05-01
We aimed to identify dietary patterns in a Danish adult population and assess the reproducibility of the dietary patterns identified. Baseline data of 3,372 women and 3,191 men (30-60 years old) from the population-based survey Inter99 was used. Food intake, assessed by a FFQ, was aggregated into thirty-four separate food groups. Dietary patterns were identified by principal component analysis. Confirmatory factor analysis and Bland Altman plots were used to assess the reproducibility of the dietary patterns identified. The Bland Altman plots were used as an alternative and new method. Two factors were retained for both women and men, which accounted for 15.1-17.4 % of the total variation. The 'Traditional' pattern was characterised by high loadings ( > or = 0.40) on paté or high-fat meat for sandwiches, mayonnaise salads, red meat, potatoes, butter and lard, low-fat fish, low-fat meat for sandwiches, and sauces. The 'Modern' pattern was characterised by high loadings on vegetables, fruit, mixed vegetable dishes, vegetable oil and vinegar dressing, poultry, and pasta, rice and wheat kernels. Small differences were observed between patterns identified for women and men. The root mean square error approximation from the confirmatory factor analysis was 0.08. The variation observed from the Bland Altman plots of factors from explorative v. confirmative analyses and explorative analyses from two sub-samples was between 18.8 and 47.7 %. Pearson's correlation was >0.89 (P < 0.0001). The reproducibility was better for women than for men. We conclude that the 'Traditional' and 'Modern' dietary patterns identified were reproducible.
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DOE Office of Scientific and Technical Information (OSTI.GOV)
Beaver, Laura M., E-mail: beaverl@onid.orst.edu; School of Biological and Population Health Sciences, Oregon State University, 103 Milam Hall, Corvallis, OR 97331; Yu, Tian-Wei, E-mail: david.yu@oregonstate.edu
2012-09-15
Increased consumption of cruciferous vegetables is associated with a reduced risk of developing prostate cancer. Indole-3-carbinol (I3C) and 3,3′-diindolylmethane (DIM) are phytochemicals derived from cruciferous vegetables that have shown promise in inhibiting prostate cancer in experimental models. Histone deacetylase (HDAC) inhibition is an emerging target for cancer prevention and therapy. We sought to examine the effects of I3C and DIM on HDACs in human prostate cancer cell lines: androgen insensitive PC-3 cells and androgen sensitive LNCaP cells. I3C modestly inhibited HDAC activity in LNCaP cells by 25% but no inhibition of HDAC activity was detected in PC-3 cells. In contrast,more » DIM significantly inhibited HDAC activity in both cell lines by as much as 66%. Decreases in HDAC activity correlated with increased expression of p21, a known target of HDAC inhibitors. DIM treatment caused a significant decrease in the expression of HDAC2 protein in both cancer cell lines but no significant change in the protein levels of HDAC1, HDAC3, HDAC4, HDAC6 or HDAC8 was detected. Taken together, these results show that inhibition of HDAC activity by DIM may contribute to the phytochemicals' anti-proliferative effects in the prostate. The ability of DIM to target aberrant epigenetic patterns, in addition to its effects on detoxification of carcinogens, may make it an effective chemopreventive agent by targeting multiple stages of prostate carcinogenesis. -- Highlights: ► DIM inhibits HDAC activity and decreases HDAC2 expression in prostate cancer cells. ► DIM is significantly more effective than I3C at inhibiting HDAC activity. ► I3C has no effect on HDAC protein expression. ► Inhibition of HDAC activity by DIM is associated with increased p21 expression. ► HDAC inhibition may be a novel epigenetic mechanism for cancer prevention with DIM.« less
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APPLYING SATELLITE IMAGERY TO TRIAGE ASSESSMENT OF ECOSYSTEM HEALTH
Considerable evidence documents that certain changes in vegetation and soils result in irreversibly degraded rangeland ecosystems. We used Advanced Very High Resolution Radiometer (AVHRR)imagery to develop calibration patterns of change in the Normalized Difference Vegetation Ind...
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Alados, C.L.; Pueyo, Y.; Giner, M.L.; Navarro, T.; Escos, J.; Barroso, F.; Cabezudo, B.; Emlen, J.M.
2003-01-01
We studied the effect of grazing on the degree of regression of successional vegetation dynamic in a semi-arid Mediterranean matorral. We quantified the spatial distribution patterns of the vegetation by fractal analyses, using the fractal information dimension and spatial autocorrelation measured by detrended fluctuation analyses (DFA). It is the first time that fractal analysis of plant spatial patterns has been used to characterize the regressive ecological succession. Plant spatial patterns were compared over a long-term grazing gradient (low, medium and heavy grazing pressure) and on ungrazed sites for two different plant communities: A middle dense matorral of Chamaerops and Periploca at Sabinar-Romeral and a middle dense matorral of Chamaerops, Rhamnus and Ulex at Requena-Montano. The two communities differed also in the microclimatic characteristics (sea oriented at the Sabinar-Romeral site and inland oriented at the Requena-Montano site). The information fractal dimension increased as we moved from a middle dense matorral to discontinuous and scattered matorral and, finally to the late regressive succession, at Stipa steppe stage. At this stage a drastic change in the fractal dimension revealed a change in the vegetation structure, accurately indicating end successional vegetation stages. Long-term correlation analysis (DFA) revealed that an increase in grazing pressure leads to unpredictability (randomness) in species distributions, a reduction in diversity, and an increase in cover of the regressive successional species, e.g. Stipa tenacissima L. These comparisons provide a quantitative characterization of the successional dynamic of plant spatial patterns in response to grazing perturbation gradient. ?? 2002 Elsevier Science B.V. All rights reserved.
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Teo, Cherlyen; Chia, Ai-Ru; Colega, Marjorelee T; Chen, Ling-Wei; Fok, Doris; Pang, Wei Wei; Godfrey, Keith M; Tan, Kok Hian; Yap, Fabian; Shek, Lynette Pei-Chi; Chong, Yap-Seng; Meaney, Michael; Chen, Helen; Chong, Mary Foong-Fong
2018-03-02
Diet in the first month postpartum, otherwise known as "the confinement diet" in Asia, has unique characteristics that are influenced by traditions, cultures, and beliefs. We aimed to characterize dietary patterns during confinement period in a multi-ethnic Asian cohort and examined their associations with postpartum depression (PPD) and anxiety (PPA). Dietary intakes of 490 women were ascertained in the first month postpartum using 3-day food diaries and dietary patterns were derived by factor analysis. Participants completed the Edinburgh Postnatal Depression Scale (EPDS) and State-Trait Anxiety Inventory (STAI) at three months' postpartum; higher scores are indicative of more depressive and anxiety symptoms, respectively. Four dietary patterns were identified: Traditional-Chinese-Confinement diet, Traditional-Indian-Confinement diet, Eat-Out diet and Soup-Vegetables-Fruits diet. The Traditional-Indian-Confinement diet was associated with less PPD symptoms [β (95% CI) -0.62 (-1.16, -0.09) EPDS score per SD increase in diet score] and a non-significant trend with reduced probable PPD (EPDS scores ≥ 13) [OR (95% CI) 0.56 (0.31, 1.01)]. The Soup-Vegetables-Fruits diet was associated with less PPA symptoms [β (95% CI) -1.49 (-2.56, -0.42) STAI-state score]. No associations were observed for other dietary patterns. Independent of ethnicity, adherence to the Traditional-Indian-Confinement diet that is characterized by intake of herbs and legumes, and Soup-Vegetables-Fruits diet high in fruits, vegetables and fish during the postpartum period were associated with less PPD and PPA symptoms, respectively.
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Liu, Da; Cui, Yue; Walcott, Ronald; Chen, Jinru
2018-01-01
Vegetable seeds contaminated with bacterial pathogens have been linked to fresh-produce-associated outbreaks of gastrointestinal infections. This study was undertaken to observe the physiological behavior of Salmonella enterica and enterohemorrhagic Escherichia coli (EHEC) cells artificially internalized into vegetable seeds during the germination process. Surface-decontaminated seeds of alfalfa, fenugreek, lettuce, and tomato were vacuum-infiltrated with four individual strains of Salmonella or EHEC. Contaminated seeds were germinated at 25°C for 9 days, and different sprout/seedling tissues were microbiologically analyzed every other day. The internalization of Salmonella and EHEC cells into vegetable seeds was confirmed by the absence of pathogens in seed-rinsing water and the presence of pathogens in seed homogenates after postinternalization seed surface decontamination. Results show that 317 (62%) and 343 (67%) of the 512 collected sprout/seedling tissue samples were positive for Salmonella and EHEC, respectively. The average Salmonella populations were significantly larger ( P < 0.05) than the EHEC populations. Significantly larger Salmonella populations were recovered from the cotyledon and seed coat tissues, followed by the root tissues, but the mean EHEC populations from all sampled tissue sections were statistically similar, except in pregerminated seeds. Three Salmonella and two EHEC strains had significantly larger cell populations on sprout/seedling tissues than other strains used in the study. Salmonella and EHEC populations from fenugreek and alfalfa tissues were significantly larger than those from tomato and lettuce tissues. The study showed the fate of internalized human pathogens on germinating vegetable seeds and sprout/seedling tissues and emphasized the importance of using pathogen-free seeds for sprout production. IMPORTANCE The internalization of microorganisms into vegetable seeds could occur naturally and represents a possible pathway of vegetable seed contamination by human pathogens. The present study investigated the ability of two important bacterial pathogens, Salmonella and enterohemorrhagic Escherichia coli (EHEC), when artificially internalized into vegetable seeds, to grow and disseminate along vegetable sprouts/seedlings during germination. The data from the study revealed that the pathogen cells artificially internalized into vegetable seeds caused the contamination of different tissues of sprouts/seedlings and that pathogen growth on germinating seeds is bacterial species and vegetable seed-type dependent. These results further stress the necessity of using pathogen-free vegetable seeds for edible sprout production. Copyright © 2017 American Society for Microbiology.
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Molecular bases for phyllomorph development in a one-leaf plant, Monophyllaea glabra.
Ishikawa, Naoko; Takahashi, Hirokazu; Nakazono, Mikio; Tsukaya, Hirokazu
2017-02-01
The aboveground part of one-leaf plants (Gesneriaceae) consists of a unique shoot-like unit called a phyllomorph, which is composed of a growing lamina and one petiolode (a stem- and petiole-like organ). The phyllomorph has three meristems: a basal meristem (BM; involved in lamina growth), a petiolode meristem (PM; required for midrib and petiolode growth), and a groove meristem (GM; contributes to inflorescence and new phyllomorph development). Although the GM has a tunica-corpus structure like a conventional shoot apical meristem (SAM), the vegetative GM of a one-leaf plant does not form any organ primordia and has been considered a defective or suppressed SAM. In this study, we evaluated the nature of the three meristems to reconsider their roles in phyllomorph development in the one-leaf species Monophyllaea glabra . Mitotic activities of meristem cells were monitored by incorporation of a thymidine analog (EdU) into DNA. Orthologs of SHOOTMERISTEMLESS ( STM ) and PHANTASTICA , ROUGH SHEATH2 , ASYMMETRIC LEAVES1 ( PHAN / RS2 / AS1 ) were isolated from M . glabra , and their expression patterns were investigated by quantitative reverse transcription polymerase chain reaction in combination with a laser microdissection technique. Mitotic activities were detected in all three phyllomorph meristems. Strong expression of the STM and PHAN / RS2 / AS1 orthologs was detected in the vegetative GM and BM, respectively. The vegetative GM is an active meristem that expresses the STM ortholog. We postulate that the GM is required for growth of a phyllomorph by providing undifferentiated cells and/or growth regulators to the BM and/or PM. © 2017 Botanical Society of America.
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Assessing global vegetation activity using spatio-temporal Bayesian modelling
NASA Astrophysics Data System (ADS)
Mulder, Vera L.; van Eck, Christel M.; Friedlingstein, Pierre; Regnier, Pierre A. G.
2016-04-01
This work demonstrates the potential of modelling vegetation activity using a hierarchical Bayesian spatio-temporal model. This approach allows modelling changes in vegetation and climate simultaneous in space and time. Changes of vegetation activity such as phenology are modelled as a dynamic process depending on climate variability in both space and time. Additionally, differences in observed vegetation status can be contributed to other abiotic ecosystem properties, e.g. soil and terrain properties. Although these properties do not change in time, they do change in space and may provide valuable information in addition to the climate dynamics. The spatio-temporal Bayesian models were calibrated at a regional scale because the local trends in space and time can be better captured by the model. The regional subsets were defined according to the SREX segmentation, as defined by the IPCC. Each region is considered being relatively homogeneous in terms of large-scale climate and biomes, still capturing small-scale (grid-cell level) variability. Modelling within these regions is hence expected to be less uncertain due to the absence of these large-scale patterns, compared to a global approach. This overall modelling approach allows the comparison of model behavior for the different regions and may provide insights on the main dynamic processes driving the interaction between vegetation and climate within different regions. The data employed in this study encompasses the global datasets for soil properties (SoilGrids), terrain properties (Global Relief Model based on SRTM DEM and ETOPO), monthly time series of satellite-derived vegetation indices (GIMMS NDVI3g) and climate variables (Princeton Meteorological Forcing Dataset). The findings proved the potential of a spatio-temporal Bayesian modelling approach for assessing vegetation dynamics, at a regional scale. The observed interrelationships of the employed data and the different spatial and temporal trends support our hypothesis. That is, the change of vegetation in space and time may be better understood when modelling vegetation change as both a dynamic and multivariate process. Therefore, future research will focus on a multivariate dynamical spatio-temporal modelling approach. This ongoing research is performed within the context of the project "Global impacts of hydrological and climatic extremes on vegetation" (project acronym: SAT-EX) which is part of the Belgian research programme for Earth Observation Stereo III.
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Biochemical processes in sagebrush ecosystems: Interactions with terrain
NASA Technical Reports Server (NTRS)
Matson, P. (Principal Investigator); Reiners, W.; Strong, L.
1985-01-01
The objectives of a biogeochemical study of sagebrush ecosystems in Wyoming and their interactions with terrain are as follows: to describe the vegetational pattern on the landscape and elucidate controlling variables, to measure the soil properties and chemical cycling properties associated with the vegetation units, to associate soil properties with vegetation properties as measured on the ground, to develop remote sensing capabilities for vegetation and surface characteristics of the sagebrush landscape, to develop a system of sensing snow cover and indexing seasonal soil to moisture; and to develop relationships between temporal Thematic Mapper (TM) data and vegetation phenological state.
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Tank, Jigna G; Thaker, Vrinda S
2014-01-01
Molecular mechanism regulated by auxin and cytokinin during endoreduplication, cell division, and elongation process is studied by using Allium cepa roots as a model system. The activity of CDK genes modulated by auxin and cytokinin during cell division, elongation, and endoreduplication process is explained in this research work. To study the significance of auxin and cytokinin in the management of cell division and endoreduplication process in plant meristematic cells at molecular level endoreduplication was developed in root tips of Allium cepa by giving colchicine treatment. There were inhibition of vegetative growth, formation of c-tumor at root tip, and development of endoreduplicated cells after colchicine treatment. This c-tumor was further treated with NAA and BAP to reinitiate vegetative growth in roots. BAP gave positive response in reinitiation of vegetative growth of roots from center of c-tumor. However, NAA gave negative response in reinitiation of vegetative growth of roots from c-tumor. Further, CDKs gene expression analysis from normal, endoreduplicated, and phytohormone (NAA or BAP) treated root tip was done and remarkable changes in transcription level of CDK genes in normal, endoreduplicated, and phytohormones treated cells were observed.
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Tank, Jigna G.; Thaker, Vrinda S.
2014-01-01
Molecular mechanism regulated by auxin and cytokinin during endoreduplication, cell division, and elongation process is studied by using Allium cepa roots as a model system. The activity of CDK genes modulated by auxin and cytokinin during cell division, elongation, and endoreduplication process is explained in this research work. To study the significance of auxin and cytokinin in the management of cell division and endoreduplication process in plant meristematic cells at molecular level endoreduplication was developed in root tips of Allium cepa by giving colchicine treatment. There were inhibition of vegetative growth, formation of c-tumor at root tip, and development of endoreduplicated cells after colchicine treatment. This c-tumor was further treated with NAA and BAP to reinitiate vegetative growth in roots. BAP gave positive response in reinitiation of vegetative growth of roots from center of c-tumor. However, NAA gave negative response in reinitiation of vegetative growth of roots from c-tumor. Further, CDKs gene expression analysis from normal, endoreduplicated, and phytohormone (NAA or BAP) treated root tip was done and remarkable changes in transcription level of CDK genes in normal, endoreduplicated, and phytohormones treated cells were observed. PMID:24955358
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NASA Astrophysics Data System (ADS)
Krell, N.; DeCarlo, K. F.; Caylor, K. K.
2015-12-01
Microrelief formations ("gilgai"), which form due to successive wetting-drying cycles typical of swelling soils, provide ecological hotspots for local fauna and flora, including higher and more robust vegetative growth. The distribution of these gilgai suggests a remarkable degree of regularity. However, it is unclear to what extent the mechanisms that drive gilgai formation are physical, such as desiccation-induced fracturing, or biological in nature, namely antecedent vegetative clustering. We investigated gilgai genesis and pattern formation in a 100 x 100 meter study area with swelling soils in a semiarid grassland at the Mpala Research Center in central Kenya. Our ongoing experiment is composed of three 9m2 treatments: we removed gilgai and limited vegetative growth by herbicide application in one plot, allowed for unrestricted seed dispersal in another, and left gilgai unobstructed in a control plot. To estimate the spatial frequencies of the repeating patterns of gilgai, we obtained ultra-high resolution (0.01-0.03m/pixel) images with an unmanned aerial vehicle (UAV) from which digital elevation models were also generated. Geostatistical analyses using wavelet and fourier methods in 1- and 2-dimensions were employed to characterize gilgai size and distribution. Preliminary results support regular spatial patterning across the gilgaied landscape and heterogeneities may be related to local soil properties and biophysical influences. Local data on gilgai and fracture characteristics suggest that gilgai form at characteristic heights and spacing based on fracture morphology: deep, wide cracks result in large, highly vegetated mounds whereas shallow cracks, induced by animal trails, are less correlated with gilgai size and shape. Our experiments will help elucidate the links between shrink-swell processes and gilgai-vegetation patterning in high activity clay soils and advance our understanding of the mechanisms of gilgai formation in drylands.
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Atmospheric teleconnection influence on North American land surface phenology
NASA Astrophysics Data System (ADS)
Dannenberg, Matthew P.; Wise, Erika K.; Janko, Mark; Hwang, Taehee; Kolby Smith, W.
2018-03-01
Short-term forecasts of vegetation activity are currently not well constrained due largely to our lack of understanding of coupled climate-vegetation dynamics mediated by complex interactions between atmospheric teleconnection patterns. Using ecoregion-scale estimates of North American vegetation activity inferred from remote sensing (1982-2015), we examined seasonal and spatial relationships between land surface phenology and the atmospheric components of five teleconnection patterns over the tropical Pacific, north Pacific, and north Atlantic. Using a set of regression experiments, we also tested for interactions among these teleconnection patterns and assessed predictability of vegetation activity solely based on knowledge of atmospheric teleconnection indices. Autumn-to-winter composites of the Southern Oscillation Index (SOI) were strongly correlated with start of growing season timing, especially in the Pacific Northwest. The two leading modes of north Pacific variability (the Pacific-North American, PNA, and West Pacific patterns) were significantly correlated with start of growing season timing across much of southern Canada and the upper Great Lakes. Regression models based on these Pacific teleconnections were skillful predictors of spring phenology across an east-west swath of temperate and boreal North America, between 40°N-60°N. While the North Atlantic Oscillation (NAO) was not strongly correlated with start of growing season timing on its own, we found compelling evidence of widespread NAO-SOI and NAO-PNA interaction effects. These results suggest that knowledge of atmospheric conditions over the Pacific and Atlantic Oceans increases the predictability of North American spring phenology. A more robust consideration of the complexity of the atmospheric circulation system, including interactions across multiple ocean basins, is an important step towards accurate forecasts of vegetation activity.
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Alexandrium minutum resting cyst distribution dynamics in a confined site
NASA Astrophysics Data System (ADS)
Anglès, Sílvia; Jordi, Antoni; Garcés, Esther; Basterretxea, Gotzon; Palanques, Albert
2010-02-01
The life cycle of the toxic dinoflagellate Alexandrium minutum consists of an asexual stage, characterized by motile vegetative cells, and a sexual stage, a resting cyst that once formed remains dormant in the sediment. Insight into the factors that determine the distribution and abundance of resting cysts is essential to understanding the dynamics of the vegetative phase. In investigations carried out between January 2005 and January 2008 in Arenys de Mar harbor (northwestern Mediterranean Sea), the spatial and temporal distribution patterns of A. minutum resting cysts and of the sediments were studied during different bloom stages of the vegetative population. Maximum cyst abundance was recorded mainly in the innermost part of the harbor while the lowest abundance always occurred near the harbor entrance, consistent with the distribution of silt-clay sediment fractions. The tendency of cysts in sediments to increase after bloom periods was clearly associated with new cyst formation, while cyst abundance decreased during non-bloom periods. Exceptions to this trend were observed in stations dominated by the deposition of coarse sediments. High correlation between the presence of cysts and clays during non-bloom periods indicates that cysts behave as passive sediment particles and are influenced by the same hydrodynamic processes as clays. In Arenys de Mar, the main physical forcing affecting sediment resuspension is the seiche, which was studied using in situ measurements and numerical models to interpret the observed distribution patterns. During non-bloom periods, cyst losses were smaller when the seiche was more active and at the station where the seiche-induced current was larger. Thus, seiche-forced resuspension appears to reduce cyst losses by reallocating cysts back to the sediment surface such that their burial in the sediment is avoided. The observed vertical profiles of the cysts were consistent with this process.
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Ulva blooms in the southwestern Gulf of California: Reproduction and biomass
NASA Astrophysics Data System (ADS)
Chávez-Sánchez, Tonatiuh; Piñón-Gimate, Alejandra; Serviere-Zaragoza, Elisa; López-Bautista, Juan Manuel; Casas-Valdez, Margarita
2018-01-01
Ulvacean blooms are generally characterized by one or more Ulva species, some of which are common to blooms across a broad geographic range. In tropical environments the identified stimuli that induce reproductive development of Ulva are restricted to temperature, salinity, dehydration and fragmentation. Culture studies have been prolific in describing the reproduction of Ulva species, but its reproductive changes in natural environment have not been described yet. Hence, seasonal changes were described in reproductive stages and their relationship with biomass and environmental factors of Ulva species at four macroalgal blooms in a subtropical bay. Eight Ulva species were found: U. acanthophora, U. clathrata, U. flexuosa, U. intestinalis, U. lactuca, U. lobata, U. nematoidea and U. rigida. Reproductive stage and biomass varied according to site and season. Five species showed four reproductive stages (vegetative, thallus with fully differentiated zooids in formation and empty cells after zooids release); for the remaining species only vegetative thalli were found. Ulva rigida showed the highest biomass values, followed by U. acanthophora, following a seasonal pattern.
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NASA Astrophysics Data System (ADS)
Piégay, H.; Bornette, G.; Citterio, A.; Hérouin, E.; Moulin, B.; Statiotis, C.
2000-10-01
Many authors have shown that the sedimentology of former channels and subsequent vegetation changes are controlled by temporal (flood events and successional processes) and spatial (e.g. distance to the main channel) factors. River channel instability can disrupt these associations. The Ain River, France, has undergone a fluvial metamorphosis during the past 100 years, its braided pattern being replaced by a sinuous single-thread pattern. As a consequence, former channels have different geometrical characteristics and sediment trap efficiencies. Former meandering channels experience more frequent backflows and are more rapidly silted than the older former braided channels. The recently abandoned channels are characterized by the development of large-sized vegetation species with a relatively slow colonization rate, whereas the older channels are colonized predominantly by flood-tolerant aquatic plants. The locally derived discharge of former channels (from groundwater or from their own basin) may reduce or prevent sediment entry during flood events and thus may decrease the sedimentation rate. In such cases, the oligotrophic component of the water from the hillslope aquifer is high and the former channel is usually nutrient-poor, characterized by oligotrophic species. The main river channel also has experienced local incision, aggradation and horizontal displacement during recent decades, so that the dynamics of the former channels strongly depend on the dynamics of the reach in which they are located. In degraded reaches, former channels are often dry, and helophyte species have been replaced by mesophytes. The frequency and magnitude of flow connection between the river channel and the former channel can increase or decrease owing to the movement of the active river channel within the fluvial corridor, inducing varying modifications of former channel vegetation patterns. River channel instability at various time-scales is a key-factor controlling process diversity and thus biodiversity in the fluvial corridor. It can modify the geometry of abandoned channels, groundwater fluxes, the amount, mobilization and deposition of sediment within the corridor, and consequently the vegetation community patterns. This increases the complexity of successional patterns, because an old former channel may be characterized by pioneer species whereas a younger one can become quickly filled and colonized by terrestrial species.
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Gustafson, Alison; Jilcott Pitts, Stephanie; McDonald, Jordan; Ford, Hannah; Connelly, Paige; Gillespie, Rachel; Liu, Emily; Bush, Heather; Brancato, Candace; Babatande, Toyin; Mullins, Janet
2017-01-01
Background: Obesity rates are higher among rural versus urban adolescents. To examine possible mechanisms for the rural-urban adolescent obesity disparity, we examined the direct and indirect effects of food purchasing patterns, and the home, school, and consumer food environments on dietary intake among rural adolescents. Methods: A baseline survey was conducted among adolescents in eight rural high schools (four in Eastern Kentucky, and four in Eastern North Carolina). Participants answered questions about food purchasing patterns, dietary intake, home food availability, and demographics. The school and consumer food environments were assessed using validated measures from the School Meals Cost Study (United States Department of Agriculture-Mathematica) and the Nutrition Environment Measurement Survey for Stores, Restaurants, and Corner Stores. Results: Of 432 adolescents, 55% were normal weight, 24% were overweight, and 21% were obese. There was a direct association between unhealthy food purchasing patterns (shopping frequently at gas stations, fast food, and dollar stores) and consuming more added sugars, when compared to those with a healthy shopping pattern (shopping less frequently at gas stations, fast food, and dollar stores) [Odds Ratio = 2.41 (95% CI (confidence interval) 0.99, 3.82)]. Those who reported always having fruits and vegetables in the home consumed more servings of fruits and vegetables [OR = 0.31 cups (95% CI 0.22, 0.44)] compared to those who reported never having fruits and vegetables in the home. Adolescents attending a school with a low healthy food availability score consumed fewer servings of fruits and vegetables [−0.001 (95% CI −0.001, 0.0001)] compared to those attending a school with a high healthy food availability score. Conclusions: There are direct associations between food purchasing patterns, the home and school food environments, and dietary intake among rural adolescents. These cross-sectional results informed the development of the “Go Big and Bring it Home” program, a text messaging intervention to improve adolescents’ fruit, vegetable, and healthy beverage intake. PMID:29065444
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Gustafson, Alison; Jilcott Pitts, Stephanie; McDonald, Jordan; Ford, Hannah; Connelly, Paige; Gillespie, Rachel; Liu, Emily; Bush, Heather; Brancato, Candace; Babatande, Toyin; Mullins, Janet
2017-10-21
Background : Obesity rates are higher among rural versus urban adolescents. To examine possible mechanisms for the rural-urban adolescent obesity disparity, we examined the direct and indirect effects of food purchasing patterns, and the home, school, and consumer food environments on dietary intake among rural adolescents. Methods : A baseline survey was conducted among adolescents in eight rural high schools (four in Eastern Kentucky, and four in Eastern North Carolina). Participants answered questions about food purchasing patterns, dietary intake, home food availability, and demographics. The school and consumer food environments were assessed using validated measures from the School Meals Cost Study (United States Department of Agriculture-Mathematica) and the Nutrition Environment Measurement Survey for Stores, Restaurants, and Corner Stores. Results : Of 432 adolescents, 55% were normal weight, 24% were overweight, and 21% were obese. There was a direct association between unhealthy food purchasing patterns (shopping frequently at gas stations, fast food, and dollar stores) and consuming more added sugars, when compared to those with a healthy shopping pattern (shopping less frequently at gas stations, fast food, and dollar stores) [Odds Ratio = 2.41 (95% CI (confidence interval) 0.99, 3.82)]. Those who reported always having fruits and vegetables in the home consumed more servings of fruits and vegetables [OR = 0.31 cups (95% CI 0.22, 0.44)] compared to those who reported never having fruits and vegetables in the home. Adolescents attending a school with a low healthy food availability score consumed fewer servings of fruits and vegetables [-0.001 (95% CI -0.001, 0.0001)] compared to those attending a school with a high healthy food availability score. Conclusions : There are direct associations between food purchasing patterns, the home and school food environments, and dietary intake among rural adolescents. These cross-sectional results informed the development of the "Go Big and Bring it Home" program, a text messaging intervention to improve adolescents' fruit, vegetable, and healthy beverage intake.
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The new reports on life cycle of Heterosigma akashiwo (Raphidophyceae)
NASA Astrophysics Data System (ADS)
Kim, J. H.
2016-02-01
Heterosigma akashiwo (Hada) Hada (Raphidophyceae) is a noxious bloom-forming algal species that has damaged many fish farms in coastal waters during recent decades. Consequently, many studies focused on the population dynamics of H. akashiwo, while its life cycle was not well studied. In this study, we investigated veiled life cycle of H. akashiwo through culture based method. We cultured eight H. akashiwostrains originated from Korea, Japan, USA under various conditions (water temp., light intensity, salinity, pH). Morphological diversity of cells were observed via light microscopy and scanning electron microscopy. To observe nucleus of living cell, cells were stained with Hoechst and changes of cells in culture were observed through time-lapse. For observation of cysts and their germination process, cysts were isolated from sediment. Different from the previous knowledge, H. akashiwo has only vegetative cell stage and cyst stage, we discovered that H. akashiwo has extra small cell stage and large cell stage. Large cells are much bigger (20-45 µm) than vegetative cells. Large cell formation was resulted from fusion of vegetative cells. Small cells were very small (6.88 ± 0.85 µm), these cell divided from large cell or formed in germination process of cysts rarely. Small cells have lower motility than vegetative cells. These results improved the study of life stages of H. akashiwo and this fundamental investigation provide important new information and improve our understanding of the life cycle of H. akashiwo.
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Remote Sensing Field Guide - Desert
1991-09-01
rcatching on fire. Caution is advised against thorns on acacia trees, spikey Spinifex n•shes, and several different types of venomous snakes, as well as...e.g., mesquite, many acacias, Spinifex . DESERT PROCESSES WORKING GROUP PATTERN INDICATOR SHFET - DESERT DUNES PHOTOS: GROUND VEGETATION MOUNDS LOCATION...deliberate burning of natural vegetation is done episodically by the abo- rginal inhabitants. They burn the mature vegetation (primarily Spinifex ), which is
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The influence of parent material on vegetation response 15 years after the Dude Fire, Arizona
Jackson M. Leonard; Alvin L. Medina; Daniel G. Neary; Aregai Tecle
2015-01-01
This study examined the effects of two types of parent material, sandstone and limestone, on the response of vegetation growth after the 1990 Dude Fire in central Arizona. The operating hypothesis of the study was that, given the right conditions, severe wildfire can trigger vegetation type conversion. Overall, three patterns emerged: (1) oak density increased by 413%...
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Negative plant soil feedback explaining ring formation in clonal plants.
Cartenì, Fabrizio; Marasco, Addolorata; Bonanomi, Giuliano; Mazzoleni, Stefano; Rietkerk, Max; Giannino, Francesco
2012-11-21
Ring shaped patches of clonal plants have been reported in different environments, but the mechanisms underlying such pattern formation are still poorly explained. Water depletion in the inner tussocks zone has been proposed as a possible cause, although ring patterns have been also observed in ecosystems without limiting water conditions. In this work, a spatially explicit model is presented in order to investigate the role of negative plant-soil feedback as an additional explanation for ring formation. The model describes the dynamics of the plant biomass in the presence of toxicity produced by the decomposition of accumulated litter in the soil. Our model qualitatively reproduces the emergence of ring patterns of a single clonal plant species during colonisation of a bare substrate. The model admits two homogeneous stationary solutions representing bare soil and uniform vegetation cover which depend only on the ratio between the biomass death and growth rates. Moreover, differently from other plant spatial patterns models, but in agreement with real field observations of vegetation dynamics, we demonstrated that the pattern dynamics always lead to spatially homogeneous vegetation covers without creation of stable Turing patterns. Analytical results show that ring formation is a function of two main components, the plant specific susceptibility to toxic compounds released in the soil by the accumulated litter and the decay rate of these same compounds, depending on environmental conditions. These components act at the same time and their respective intensities can give rise to the different ring structures observed in nature, ranging from slight reductions of biomass in patch centres, to the appearance of marked rings with bare inner zones, as well as the occurrence of ephemeral waves of plant cover. Our results highlight the potential role of plant-soil negative feedback depending on decomposition processes for the development of transient vegetation patterns. Copyright © 2012 Elsevier Ltd. All rights reserved.
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Range and variation in landscape patch dynamics: Implications for ecosystem management
Robert E. Keane; Janice L. Garner; Casey Teske; Cathy Stewart; Paul Hessburg
2001-01-01
Northern Rocky Mountain landscape patterns are shaped primarily by fire and succession, and conversely, these vegetation patterns influence burning patterns and plant colonization processes. Historical range and variability (HRV) of landscape pattern can be quantified from three sources: (1) historical chronosequences, (2) spatial series, and (3) simulated...
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Exploring the patterns of alpine vegetation of Eastern Bhutan: a case study from the Merak Himalaya.
Jamtsho, Karma; Sridith, Kitichate
2015-01-01
A survey was conducted from March to September 2012 along the altitudinal gradient of the Jomokungkhar trail in the Merak Himalaya of Sakteng Wildlife Sanctuary to study the floristic compositions and the patterns of alpine vegetation of Eastern Bhutan. The vegetation of the sampled plots is classified into five types of communities based on the hierarchical cluster analysis at similarity index 63% viz., (1) Riverine Community; (2) Abies-Rhododendron Woodland Community; (3) Juniperus Scrub Community; (4) Rhododendron Krummholz and (5) Alpine Meadow, based on the floristic compositions. In addition, it was noticed that the fragile alpine environment of the Merak Himalaya has high plant diversity and important plants that are susceptible to the anthropogenic pressures.
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Velie, Ellen M; Schairer, Catherine; Flood, Andrew; He, Jian-Ping; Khattree, Ravindra; Schatzkin, Arthur
2005-12-01
Inconsistent associations have been reported between diet and breast cancer. We prospectively examined the association between dietary patterns and postmenopausal breast cancer risk in a US-wide cohort study. Data were analyzed from 40 559 women who completed a self-administered 61-item Block food-frequency questionnaire in the Breast Cancer Detection Demonstration Project, 1987-1998; 1868 of those women developed breast cancer. Dietary patterns were defined by using principal components factor analysis. Cox proportional hazard regression was used to assess breast cancer risk. Three major dietary patterns emerged: vegetable-fish/poultry-fruit, beef/pork-starch, and traditional southern. The vegetable-fish/poultry-fruit pattern was associated with higher education than were the other patterns, but was similar in nutrient intake to the traditional southern pattern. After adjustment for confounders, there was no significant association between the vegetable-fish/poultry-fruit and beef/pork-starch patterns and breast cancer. The traditional southern pattern, however, was associated with a nonsignificantly reduced breast cancer risk among all cases (in situ and invasive) that was significant for invasive breast cancer (relative hazard = 0.78; 95% CI = 0.65, 0.95; P for trend = 0.003). This diet was also associated with a reduced risk in women without a family history of breast cancer (P = 0.05), who were underweight or normal weight [body mass index (in kg/m(2)) < 25; P = 0.02], or who had tumors positive for estrogen receptor (P = 0.01) or progesterone receptor (P = 0.003). Foods in the traditional southern pattern associated with reduced breast cancer risk were legumes, low mayonnaise-salad dressing intake, and possibly cabbage. The traditional southern diet or its components are associated with a reduced risk of invasive breast cancer in postmenopausal women.
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Dietary patterns and weight change: 15-year longitudinal study in Australian adults.
Arabshahi, Simin; Ibiebele, Torukiri I; Hughes, Maria Celia B; Lahmann, Petra H; Williams, Gail M; van der Pols, Jolieke C
2017-06-01
Dietary intake is one of the most modifiable risk factors associated with obesity. However, data on the relationship between dietary patterns and long-term weight change are limited. We therefore investigated the association between dietary patterns and 15-year weight change in a sample of 1186 Australian adults (1992-2007). We measured body weight and collected data on socio-demographic and lifestyle characteristics in 1992 and 2007. Applying principal component analysis to 38 food groups from a food frequency questionnaire collected at baseline, we identified two dietary patterns: 'meat-and-fat' and 'fruit-and-vegetable.' Using generalized estimating equations, multivariable regression models, stratified by sex, were adjusted for concurrent changes in socio-demographic and lifestyle variables. The average increase in body weight of men in the highest tertile of the meat-and-fat pattern was more than twice that of men in the lowest tertile; mean weight change (95 % CI): 4.8 (-0.1, 9.7) kg versus 2.3 (-2.6, 7.1) kg, P-for-trend = 0.02. In contrast, average weight gain of men in the highest tertile of the fruit-and-vegetable pattern was only about half that of men in the lowest tertile; mean weight change (95 % CI): 2.9 (-2.0, 7.8) kg versus 5.4 (-1.5, 10.4) kg, P-for-trend = 0.02. Among women, dietary patterns were not related to weight change. These dietary patterns predict change in body weight in men, but not in women. In this cohort, a dietary pattern high in fruit and vegetables was related to less weight gain in men than a dietary pattern high in meat and fat.
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Disinfection of Vegetative Cells of Bacillus anthracis
2016-03-01
1. INTRODUCTION Disinfection of Bacillus anthracis spores in drinking water is well documented in peer-reviewed literature (Adcock et al., 2004... Disinfection kinetics of vegetative cells of Bacillus anthracis in water with free available chlorine ([FAC] 2 mg/L) and monochloramine ([MC] 2 mg/L) were...anthracis. Bacillus anthracis cells Drinking water Chlorine demand-free (CDF
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DETECTING TEMPORAL CHANGE IN WATERSHED NUTRIENT YIELDS
Meta-analyses reveal that nutrient yields tend to be higher for watersheds dominated by anthropogenic uses (e.g., urban, agriculture) and lower for watersheds dominated by natural vegetation. One implication of this pattern is that loss of natural vegetation will produce increase...
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Genetically engineered plants with increased vegetative oil content
Benning, Christoph
2017-05-23
The invention relates to genetically modified agricultural plants with increased oil content in vegetative tissues, as well as to expression systems, plant cells, seeds and vegetative tissues related thereto.
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NASA Technical Reports Server (NTRS)
Hsu, Wei-Chen; Remar, Alex; McClure, Adam; Williams, Emily; Kannan, Soumya; Steers, Robert; Schmidt, Cindy; Skiles, Joseph W.; Hsu, Wei-Chen
2011-01-01
The land-ocean interface along the central coast of California is one of the most diverse biogeographic regions of the state. This area is composed of a species-rich mosaic of coastal grassland, shrubland, and forest vegetation types. An acceleration of conifer encroachment into shrublands and shrub encroachment into grasslands along the coast has been recently documented. These vegetation changes are believed to be driven primarily by fire suppression and changing grazing patterns. Climatic variables such as precipitation, fog, cloud cover, temperature, slope, and elevation also play an important role in vegetation succession. Our study area is located along the central California coast, which is characterized by a precipitation gradient from the relatively wetter and cooler north to the drier and warmer south. Some studies indicate changing fog patterns along this coast, which may greatly impact vegetation. A decrease in water availability could slow succession processes. The primary objective of this project is to determine if vegetation succession rates are changing for the study area and to identify climate and ecosystem variables which contribute to succession, specifically the transition among grassland, shrubland, and forest. To identify vegetation types and rates of succession, we classified two Landsat TM 5 scenes from 1985 to 2010 with a resulting overall accuracy of 82.4%. Vegetation succession was correlated to changes in maximum and minimum temperatures, precipitation, and elevation for each sub-region of the study area. Fog frequency was then compared between the northern and southern regions of the study area for determining the spatial relation between fog frequency and the percent of vegetation change.
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Geoghegan, Ivey A.
2017-01-01
Summary Chitin deacetylation results in the formation of chitosan, a polymer of β1,4‐linked glucosamine. Chitosan is known to have important functions in the cell walls of a number of fungal species, but its role during hyphal growth has not yet been investigated. In this study, we have characterized the role of chitin deacetylation during vegetative hyphal growth in the filamentous phytopathogen Magnaporthe oryzae. We found that chitosan localizes to the septa and lateral cell walls of vegetative hyphae and identified 2 chitin deacetylases expressed during vegetative growth—CDA1 and CDA4. Deletion strains and fluorescent protein fusions demonstrated that CDA1 is necessary for chitin deacetylation in the septa and lateral cell walls of mature hyphae in colony interiors, whereas CDA4 deacetylates chitin in the hyphae at colony margins. However, although the Δcda1 strain was more resistant to cell wall hydrolysis, growth and pathogenic development were otherwise unaffected in the deletion strains. The role of chitosan hydrolysis was also investigated. A single gene encoding a putative chitosanase (CSN) was discovered in M. oryzae and found to be expressed during vegetative growth. However, chitosan localization, vegetative growth, and pathogenic development were unaffected in a CSN deletion strain, rendering the role of this enzyme unclear. PMID:28371146
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NASA Astrophysics Data System (ADS)
Georgopoulou, Danai; Koutsias, Nikos
2015-04-01
Vegetation phenology is an important element of vegetation characteristics that can be useful in vegetation monitoring especially when satellite remote sensing observations are used. In that sense temporal profiles extracted from spectral signal of time series MODIS and LANDSAT satellite images can be used to characterize vegetation phenology and thus to be helpful for monitoring vegetation recovery in fire-affected areas. The aim of this study is to explore the vegetation recovery pattern of the catastrophic wildfires that occurred in Peloponnisos, southern Greece, in 2007. These fires caused the loss of 67 lives and were recognized as the most extreme natural disaster in the country's recent history. Satellite remote sensing data from MODIS and LANDSAT satellites in the period from 2000 to 2014 were acquired and processed to extract the temporal profiles of the spectral signal for selected areas within the fire-affected areas. This dataset and time period analyzed together with the time that these fires occurred gave the opportunity to create temporal profiles seven years before and seven years after the fire. The different scale of the data used gave us the chance to understand how vegetation phenology and therefore the recovery patterns are influenced by the spatial resolution of the satellite data used. Different metrics linked to key phenological events have been created and used to assess vegetation recovery in the fire-affected areas. Our analysis was focused in the main land cover types that were mostly affected by the 2007 wildland fires. Based on CORINE land-cover maps these were agricultural lands highly interspersed with large areas of natural vegetation followed by sclerophyllous vegetation, transitional woodland shrubs, complex cultivation patterns and olive groves. Apart of the use of the original spectral data we estimated and used vegetation indices commonly found in vegetation studies as well as in burned area mapping studies. In this study we explore the strength and the use of these time series satellite data to characterize vegetation phenology as an a aid to monitor vegetation recovery in fire affected-areas. In a recent study we found that the original spectral channels, based on which these indices are estimated, are sensitive to external vegetation parameters such as the spectral reflectance of the background soil. In such cases, the influence of the soil in the reflectance values is different in the various spectral regions depending on its type. The use of such indices is also justified according to a recent study on the sensitivity of spectral reflectance values to different burn and vegetation ratios, who concluded that the Near Infrared (NIR) and Short-Wave Infrared (SWIR) are the most important channels to estimate the percentage of burned area, whereas the NIR and red channels are the most important to estimate the percentage of vegetation in fire-affected areas. Additionally, it has been found that semi-burned classes are spectrally more consistent to their different fractions of scorched and non-scorched vegetation, than the original spectral channels based on which these indices are estimated.
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Nakov, Teofil; Beaulieu, Jeremy M; Alverson, Andrew J
2018-04-06
Patterns of species richness are commonly linked to life history strategies. In diatoms, an exceptionally diverse lineage of photosynthetic heterokonts important for global photosynthesis and burial of atmospheric carbon, lineages with different locomotory and reproductive traits differ dramatically in species richness, but any potential association between life history strategy and diversification has not been tested in a phylogenetic framework. We constructed a time-calibrated, 11-gene, 1151-taxon phylogeny of diatoms - the most inclusive diatom species tree to date. We used this phylogeny, together with a comprehensive inventory of first-last occurrences of Cenozoic fossil diatoms, to estimate ranges of expected species richness, diversification and its variation through time and across lineages. Diversification rates varied with life history traits. Although anisogamous lineages diversified faster than oogamous ones, this increase was restricted to a nested clade with active motility in the vegetative cells. We propose that the evolution of motility in vegetative cells, following an earlier transition from oogamy to anisogamy, facilitated outcrossing and improved utilization of habitat complexity, ultimately leading to enhanced opportunity for adaptive divergence across a variety of novel habitats. Together, these contributed to a species radiation that gave rise to the majority of present-day diatom diversity. © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.
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Serum plant sterols as surrogate markers of dietary compliance in familial dyslipidemias.
Mateo-Gallego, Rocío; Baila-Rueda, Lucía; Mouratidou, Theodora; De Castro-Orós, Isabel; Bea, Ana M; Perez-Calahorra, Sofía; Cenarro, Ana; Moreno, Luis A; Civeira, Fernando
2015-06-01
A well-balanced diet is the first-line treatment in hyperlipidemia. The objective was to study the association between serum phytosterols and dietary patterns to use them as surrogate markers of dietary compliance in primary dyslipidemias. 288 patients with primary hyperlipidemias (192 autosomal dominant hypercholesterolemia (ADH) and 96 familial combined hyperlipidemia (FCHL)) were included. Principal factor analysis identified 2 major dietary patterns using a 137-item food frequency questionnaire. "Vegetable & Fruits pattern" was characterized by higher intake of fruits, green beans, nuts, tomatoes, roasted or boiled potatoes, lettuce and chard and lower of processed baked goods, pizza and beer. "Western pattern" was positively characterized by hamburgers, pasta, sunflower oil, rice, chickpeas, whole milk, veal, red beans and negatively with white fish. Serum non-cholesterol sterols were determined by HPLC-MS/MS. Plant sterols to-total cholesterol (TC) levels were lower with a higher adherence to a "Vegetable & Fruits pattern" (P = 0.009), mainly in ADH subjects (R(2) = 0.019). Their concentration was greater with higher compliance to "Western pattern" especially in FCHL (P = 0.014). Higher levels of synthesis markers-to-TC with a greater adherence to "Vegetable & Fruits pattern" were found (P = 0.001) (R(2) = 0.033 and R(2) = 0.109 in ADH and FCHL respectively). In subjects with primary dislipidemia, dietary patterns associate with serum absorption and synthesis markers, but no with lipid concentrations. The influence of diet on non-cholesterol sterols levels is not powerful enough to use them as subrogate markers. Copyright © 2014 Elsevier Ltd and European Society for Clinical Nutrition and Metabolism. All rights reserved.
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Nonlocal grazing in patterned ecosystems.
Siero, E
2018-01-07
Many ecosystems exhibit gapped, labyrinthine, striped or spotted patterns. Important examples are vegetation patterns in drylands: these patterns are viewed as precursors of a catastrophic transition to a degraded state. A possible source of degradation is overgrazing, but many current spatially extended models include grazing in a local linear way. In this article nonlocal grazing responses are derived, taking into account (1) how many consumers there are (demographic response) (2) where they are (aggregative response) and (3) how much they forage (functional response). Different assumptions lead to different grazing responses, the type of grazing has a large influence on how ecosystems adapt to changing environmental conditions. In dryland simulations the different types of grazing are shown to alter the desertification process driven by decreasing rainfall. A sufficiently strong aggregative response leads to the suppression of vegetation patterns, nuancing their role as generic early warning signals. Copyright © 2017 Elsevier Ltd. All rights reserved.
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NASA Astrophysics Data System (ADS)
Larsen, L. E.; Harvey, J. W.; Crimaldi, J. P.
2007-12-01
The ridge and slough landscape is a patterned peatland within the Florida Everglades in which elevated ridges of emergent vegetation are regularly interspersed among open-water sloughs with floating and submerged vegetation. Landscape features are aligned parallel to the historic flow direction. Degradation of patterning over the past 100 years coincides with diminished flow resulting from drainage and construction of levees and canals. A goal of restoration is to increase flow velocities and redistribution of particles and solutes in attempt to preserve remnant patterning and restore degraded portions of the ridge and slough landscape. To explore different management strategies that could induce sediment redistribution in the ridge and slough landscape, we simulated velocity profiles and bed shear stresses for different combinations of surface water stage, water surface slope, and vegetation community structure, based on field measurements and laboratory experiments. A mixing length approach, in which the minimum of stem spacing and distance from a solid boundary determined eddy scale, was used to simulate velocity profiles and bed shear stress in vegetated arrays. Simplified velocity profiles based only on vegetation frontal area above the bed and the Karman-Prandtl logarithmic law near the bed closely were used to approximate solutions of the one-dimensional Navier-Stokes equations for large-scale simulation. Estimates of bed shear stress were most sensitive to bed roughness, vegetation community structure, and energy slope. Importantly, our simulations illustrate that velocity and bed shear stress cannot be increased substantially in the Everglades simply by increasing surface-water stage. This result comes directly from the dependence of velocity and shear stress on vegetation frontal area and the fact that emergent vegetation stems protrude through the water column even during times of relatively deep water in the Everglades. Since merely increasing water depth is not likely to increase water velocity and entrainment, it is necessary instead that restoration focus on increasing energy slope as a means to entrain sediment within sloughs and redistribute it to ridges. Surface-water gravity waves caused by hurricanes or pulsed releases of water from impounded areas may be the most effective mechanism for achieving sediment redistribution in the Everglades and other wetland and riparian environments with abundant emergent vegetation.
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Burnat, Mireia; Herrero, Antonia; Flores, Enrique
2014-01-01
Heterocyst-forming cyanobacteria are multicellular organisms in which growth requires the activity of two metabolically interdependent cell types, the vegetative cells that perform oxygenic photosynthesis and the dinitrogen-fixing heterocysts. Vegetative cells provide the heterocysts with reduced carbon, and heterocysts provide the vegetative cells with fixed nitrogen. Heterocysts conspicuously accumulate polar granules made of cyanophycin [multi-L-arginyl-poly (L-aspartic acid)], which is synthesized by cyanophycin synthetase and degraded by the concerted action of cyanophycinase (that releases β-aspartyl-arginine) and isoaspartyl dipeptidase (that produces aspartate and arginine). Cyanophycin synthetase and cyanophycinase are present at high levels in the heterocysts. Here we created a deletion mutant of gene all3922 encoding isoaspartyl dipeptidase in the model heterocyst-forming cyanobacterium Anabaena sp. strain PCC 7120. The mutant accumulated cyanophycin and β-aspartyl-arginine, and was impaired specifically in diazotrophic growth. Analysis of an Anabaena strain bearing an All3922-GFP (green fluorescent protein) fusion and determination of the enzyme activity in specific cell types showed that isoaspartyl dipeptidase is present at significantly lower levels in heterocysts than in vegetative cells. Consistently, isolated heterocysts released substantial amounts of β-aspartyl-arginine. These observations imply that β-aspartyl-arginine produced from cyanophycin in the heterocysts is transferred intercellularly to be hydrolyzed, producing aspartate and arginine in the vegetative cells. Our results showing compartmentalized metabolism of cyanophycin identify the nitrogen-rich molecule β-aspartyl-arginine as a nitrogen vehicle in the unique multicellular system represented by the heterocyst-forming cyanobacteria. PMID:24550502
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Burnat, Mireia; Herrero, Antonia; Flores, Enrique
2014-03-11
Heterocyst-forming cyanobacteria are multicellular organisms in which growth requires the activity of two metabolically interdependent cell types, the vegetative cells that perform oxygenic photosynthesis and the dinitrogen-fixing heterocysts. Vegetative cells provide the heterocysts with reduced carbon, and heterocysts provide the vegetative cells with fixed nitrogen. Heterocysts conspicuously accumulate polar granules made of cyanophycin [multi-L-arginyl-poly (L-aspartic acid)], which is synthesized by cyanophycin synthetase and degraded by the concerted action of cyanophycinase (that releases β-aspartyl-arginine) and isoaspartyl dipeptidase (that produces aspartate and arginine). Cyanophycin synthetase and cyanophycinase are present at high levels in the heterocysts. Here we created a deletion mutant of gene all3922 encoding isoaspartyl dipeptidase in the model heterocyst-forming cyanobacterium Anabaena sp. strain PCC 7120. The mutant accumulated cyanophycin and β-aspartyl-arginine, and was impaired specifically in diazotrophic growth. Analysis of an Anabaena strain bearing an All3922-GFP (green fluorescent protein) fusion and determination of the enzyme activity in specific cell types showed that isoaspartyl dipeptidase is present at significantly lower levels in heterocysts than in vegetative cells. Consistently, isolated heterocysts released substantial amounts of β-aspartyl-arginine. These observations imply that β-aspartyl-arginine produced from cyanophycin in the heterocysts is transferred intercellularly to be hydrolyzed, producing aspartate and arginine in the vegetative cells. Our results showing compartmentalized metabolism of cyanophycin identify the nitrogen-rich molecule β-aspartyl-arginine as a nitrogen vehicle in the unique multicellular system represented by the heterocyst-forming cyanobacteria.
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Opportunities and challenges for the use of molecular proxies in environmental reconstructions
NASA Astrophysics Data System (ADS)
Jansen, Boris
2017-04-01
The last decades have seen a dramatic increase in the use of organic matter from soils and sediments as molecular proxy for reconstructing past dynamics of vegetation and climate. Applications range from the use of changes in preserved leaf wax lipid patterns or d13C signatures of organic matter to reconstruct shifts in vegetation composition, to the use of changes in d2H patterns as a past humidity / precipitation proxy. Particularly exciting in this respect are recent developments with respect to combining various molecular proxies. For instance by compound specific d13C and d2H analysis of selected lipids that themselves are used as vegetation proxy. However, as with all scientific development, all that glitters is not gold. Together with great promise, successful application of molecular proxies to reconstruct past environmental change also comes with several important challenges. For instance, to what extent are plant lipid patterns used for vegetation reconstruction affected by genotypic plasticity of the producing plant species? How might the heterogeneity of environmental and biochemical processes on/in different plant species interfere with the successful use of d2H and d13C patterns? What is the influence of differences in input routes into a soil or sedimentary archive, e.g. aboveground vs. belowground, on the desired reconstruction? In this presentation I will discuss both the opportunities and the challenges of the use of organic matter as molecular proxy in environmental reconstructions, using several recent examples of research from our group.
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Delgado Sandoval, Silvia del Carmen; Abraham Juárez, María Jazmín; Simpson, June
2012-03-01
Agave tequilana is a monocarpic perennial species that flowers after 5-8 years of vegetative growth signaling the end of the plant's life cycle. When fertilization is unsuccessful, vegetative bulbils are induced on the umbels of the inflorescence near the bracteoles from newly formed meristems. Although the regulation of inflorescence and flower development has been described in detail for monocarpic annuals and polycarpic species, little is known at the molecular level for these processes in monocarpic perennials, and few studies have been carried out on bulbils. Histological samples revealed the early induction of umbel meristems soon after the initiation of the vegetative to inflorescence transition in A. tequilana. To identify candidate genes involved in the regulation of floral induction, a search for MADS-box transcription factor ESTs was conducted using an A. tequilana transcriptome database. Seven different MIKC MADS genes classified into 6 different types were identified based on previously characterized A. thaliana and O. sativa MADS genes and sequences from non-grass monocotyledons. Quantitative real-time PCR analysis of the seven candidate MADS genes in vegetative, inflorescence, bulbil and floral tissues uncovered novel patterns of expression for some of the genes in comparison with orthologous genes characterized in other species. In situ hybridization studies using two different genes showed expression in specific tissues of vegetative meristems and floral buds. Distinct MADS gene regulatory patterns in A. tequilana may be related to the specific reproductive strategies employed by this species.
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Shiozawa, J A; Jelenska, M M; Jacobson, B S
1987-07-28
Through the application of a unique method for isolating plasma membranes, it was possible to specifically iodinate cytoplasm-exposed plasma membrane proteins in vegetative cells of the cellular slime mold Dictyostelium discoideum. The original procedure [Chaney, L. K., & Jacobson, B. S. (1983) J. Biol. Chem. 258, 10062] which involved coating cells with colloidal silica has been modified to yield a more pure preparation. The presence of the continuous and dense silica pellicle on the outside surface of the isolated plasma membrane permitted the specific labeling of cytoplasm-exposed membrane proteins. Lactoperoxidase-catalyzed iodination was employed to label cell-surface and cytoplasm-exposed membrane proteins. The isolated and radioiodinated membranes were then compared and analyzed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The cell-surface and cytoplasmic face labeling patterns were distinct. A total of 65 proteins were found to be accessible to at least one surface of the membrane. Sixteen intermolecular disulfide bond complexes were observed in the plasma membrane of Dictyostelium; most of these complexes involved glycoproteins and, hence, were exposed to the cell surface.
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John D. Alexander; Nathaniel E. Seavy; C Ralph; Bill Hogoboom
2006-01-01
We used vegetation data collected in areas before they were burned by the 2500 ha Quartz fire in southern Oregon and the 50 600 ha Big Bar complex in northern California to evaluate the ability of vegetation and topographic characteristics to predict patterns of fire severity. Fire severity was characterized as high, moderate, or low based on crown scorch and...
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Mark H. Huff; Roger D. Ottmar; Ernesto Alvarado; Robert E. Vihnanek; John F. Lehmkuhl; Paul F. Hessburg; Richard L. Everett
1995-01-01
We compared the potential fire behavior and smoke production of historical and current time periods based on vegetative conditions in forty-nine 5100- to 13 5OO-hectare watersheds in six river basins in eastern Oregon and Washington. Vegetation composition, structure, and patterns were attributed and mapped from aerial photographs taken from 1932 to 1959 (historical)...
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Lem G. Butler; Knut Kielland; T. Scott Rupp; Thomas A. Hanley
2007-01-01
We examined the interactive effects of mammalian herbivory and fluvial dynamics on vegetation dynamics and composition along the Tanana River in interior Alaska between Fairbanks and Manley Hot Springs. We used a spatially explicit model of landscape dynamics (ALFRESCO) to simulate vegetation changes on a 1-year time-step. The model was run for 250 years and was...
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Petrakis, Roy; van Leeuwen, Willem J.D.; Villarreal, Miguel; Tashjian, Paul; Dello Russo, Regina; Scott, Christopher A.
2017-01-01
Riparian ecosystems are valuable to the ecological and human communities that depend on them. Over the past century, they have been subject to shifting management practices to maximize human use and ecosystem services, creating a complex relationship between water policy, management, and the natural ecosystem. This has necessitated research on the spatial and temporal dynamics of riparian vegetation change. The San Acacia Reach of the Middle Rio Grande has experienced multiple management and river flow fluctuations, resulting in threats to its riparian and aquatic ecosystems. This research uses remote sensing data, GIS, a review of management decisions, and an assessment of climate to both quantify how riparian vegetation has been altered over time and provide interpretations of the relationships between riparian change and shifting climate and management objectives. This research focused on four management phases from 1935 to 2014, each highlighting different management practices and climate-driven river patterns, providing unique opportunities to observe a direct relationship between river management, climate, and riparian response. Overall, we believe that management practices coupled with reduced surface river-flows with limited overbank flooding influenced the compositional and spatial patterns of vegetation, including possibly increasing non-native vegetation coverage. However, recent restoration efforts have begun to reduce non-native vegetation coverage.
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VanBuren, Robert; Wai, Ching Man; Zhang, Qingwei; Song, Xiaomin; Edger, Patrick P; Bryant, Doug; Michael, Todd P; Mockler, Todd C; Bartels, Dorothea
2017-10-01
Resurrection plants desiccate during periods of prolonged drought stress, then resume normal cellular metabolism upon water availability. Desiccation tolerance has multiple origins in flowering plants, and it likely evolved through rewiring seed desiccation pathways. Oropetium thomaeum is an emerging model for extreme drought tolerance, and its genome, which is the smallest among surveyed grasses, was recently sequenced. Combining RNA-seq, targeted metabolite analysis and comparative genomics, we show evidence for co-option of seed-specific pathways during vegetative desiccation. Desiccation-related gene co-expression clusters are enriched in functions related to seed development including several seed-specific transcription factors. Across the metabolic network, pathways involved in programmed cell death inhibition, ABA signalling and others are activated during dehydration. Oleosins and oil bodies that typically function in seed storage are highly abundant in desiccated leaves and may function for membrane stability and storage. Orthologs to seed-specific LEA proteins from rice and maize have neofunctionalized in Oropetium with high expression during desiccation. Accumulation of sucrose, raffinose and stachyose in drying leaves mirrors sugar accumulation patterns in maturing seeds. Together, these results connect vegetative desiccation with existing seed desiccation and drought responsive pathways and provide some key candidate genes for engineering improved drought tolerance in crop plants. © 2017 John Wiley & Sons Ltd.
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Diet and proinflammatory cytokine levels in head and neck squamous cell carcinoma
Arthur, Anna E.; Peterson, Karen E.; Shen, Jincheng; Djuric, Zora; Taylor, Jeremy M.G.; Hebert, James R.; Duffy, Sonia A.; Peterson, Lisa A.; Bellile, Emily L.; Whitfield, Joel R.; Chepeha, Douglas B.; Schipper, Matthew J.; Wolf, Gregory T.; Rozek, Laura S.
2014-01-01
Background Proinflammatory cytokine levels may be associated with cancer stage, recurrence, and survival. A study was undertaken to determine if cytokine levels were associated with dietary patterns and fat-soluble micronutrients in previously untreated head and neck squamous cell carcinoma (HNSCC) patients. Methods This was a cross-sectional study of 160 newly diagnosed HNSCC patients who completed pretreatment food frequency questionnaires (FFQ) and health surveys. Dietary patterns were derived from FFQs using principal component analysis. Pretreatment serum levels of the proinflammatory cytokines IL-6, TNF-α, and IFN-γ were measured by ELISA and serum carotenoid and tocopherol levels by HPLC. Multivariable ordinal logistic regression models examined associations between cytokines and quartiles of reported and serum dietary variables. Results Three dietary patterns emerged: whole foods, Western, and convenience foods. In multivariable analyses, higher whole foods pattern scores were significantly associated with lower levels of IL-6, TNF-α, and IFN-γ (P = <0.001, P = 0.008, and P = 0.03, respectively). Significant inverse associations were reported between IL-6, TNF-α, and IFN-γ levels and quartiles of total reported carotenoid intake (P = 0.006, P = 0.04, and P = 0.04, respectively). There was an inverse association between IFN-γ levels and serum α-tocopherol levels (P = 0.03). Conclusions Consuming a pretreatment diet rich in vegetables, fruit, fish, poultry and whole grains may be associated with lower proinflammatory cytokine levels in patients with HNSCC. PMID:24830761
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NASA Astrophysics Data System (ADS)
Lief, Aram Parrish
In 2005, Hurricane Katrina's diverse impacts on the Greater New Orleans area included damaged and destroyed trees, and other despoiled vegetation, which also increased the exposure of artificial and bare surfaces, known factors that contribute to the climatic phenomenon known as the urban heat island (UHI). This is an investigation of UHI in the aftermath of Hurricane Katrina, which entails the analysis of pre and post-hurricane Katrina thermal imagery of the study area, including changes to surface heat patterns and vegetative cover. Imagery from Landsat TM was used to show changes to the pattern and intensity of the UHI effect, caused by an extreme weather event. Using remote sensing visualization methods, in situ data, and local knowledge, the author found there was a measurable change in the pattern and intensity of the New Orleans UHI effect, as well as concomitant changes to vegetative land cover. This finding may be relevant for urban planners and citizens, especially in the context of recovery from a large-scale disaster of a coastal city, regarding future weather events, and other natural and human impacts.
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Snacking patterns, diet quality, and cardiovascular risk factors in adults.
Nicklas, Theresa A; O'Neil, Carol E; Fulgoni, Victor L
2014-04-23
The relationship of snacking patterns on nutrient intake and cardiovascular risk factors (CVRF) in adults is unknown. The aim of this study was to examine the associations of snacking patterns with nutrient intake, diet quality, and a selection of CVRF in adults participating in the 2001-2008 National Health and Nutrition Examination Survey. 24-hour dietary recalls were used to determine intake and cluster analysis was used to identify the snacking patterns. Height and weight were obtained and the health indices that were evaluated included diastolic and systolic blood pressure, high density lipoprotein-cholesterol, low density lipoprotein cholesterol, triacylglycerides, blood glucose, and insulin. The sample was participants (n = 18,988) 19+ years (50% males; 11% African-Americans; 72% white, 12% Hispanic-Americans, and 5% other). Cluster analyses generated 12 distinct snacking patterns, explaining 61% of the variance in snacking. Comparisons of snacking patterns were made to the no snack pattern. It was found that miscellaneous snacks constituted the most common snacking pattern (17%) followed by cakes/cookies/pastries (12%) and sweets (9%). Most snacking patterns were associated with higher energy intakes. Snacking patterns cakes/cookies/pastries, vegetables/legumes, crackers/salty snacks, other grains and whole fruit were associated with lower intakes of saturated fatty acids. Added sugars intakes were higher in the cakes/cookies/pastries, sweets, milk desserts, and soft drinks patterns. Five snack patterns (cakes/cookies/pastries, sweets, vegetable/legumes, milk desserts, soft drinks) were associated with lower sodium intakes. Several snack patterns were associated with higher intakes of potassium, calcium, fiber, vitamin A, and magnesium. Five snacking patterns (miscellaneous snacks; vegetables/legumes; crackers/salty snacks; other grains; and whole fruit) were associated with better diet quality scores. Alcohol was associated with a lower body mass index and milk desserts were associated with a lower waist circumference. No snack patterns were associated with other CVRF studied. Overall, several snacking patterns were associated with better diet quality than those consuming no snacks. Yet, the majority of the snacking patterns were not associated with CVRF. Education is needed to improve snacking patterns in terms of nutrients to limit in the diet along with more nutrient-dense foods to be included in snacks.
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Geologic information from satellite images
NASA Technical Reports Server (NTRS)
Lee, K.; Knepper, D. H.; Sawatzky, D. L.
1974-01-01
Extracting geologic information from ERTS and Skylab/EREP images is best done by a geologist trained in photo-interpretation. The information is at a regional scale, and three basic types are available: rock and soil, geologic structures, and landforms. Discrimination between alluvium and sedimentary or crystalline bedrock, and between units in thick sedimentary sequences is best, primarily because of topographic expression and vegetation differences. Discrimination between crystalline rock types is poor. Folds and fractures are the best displayed geologic features. They are recognizable by topographic expression, drainage patterns, and rock or vegetation tonal patterns. Landforms are easily discriminated by their familiar shapes and patterns. Several examples demonstrate the applicability of satellite images to tectonic analysis and petroleum and mineral exploration.
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Pierce, John P; Natarajan, Loki; Caan, Bette J; Flatt, Shirley W; Kealey, Sheila; Gold, Ellen B; Hajek, Richard A; Newman, Vicky A; Rock, Cheryl L; Pu, Minya; Saquib, Nazmus; Stefanick, Marcia L; Thomson, Cynthia A; Parker, Barbara
2009-01-01
Background: A diet high in vegetables, fruit, and fiber and low in fat decreased additional risk of secondary breast cancer events in women without hot flashes (HF−) compared with that in women with hot flashes (HF+), possibly through lowered concentrations of circulating estrogens. Objective: The objective was to investigate the intervention effect by baseline quartiles of dietary pattern among breast cancer survivors in the HF− subgroup of the Women's Healthy Eating and Living Study. Design: A randomized controlled trial compared a putative cancer prevention diet with a diet of 5 servings of vegetables and fruit daily in early-stage breast cancer survivors. Participants did not experience hot flashes at baseline (n = 896). We confirmed cancer status for 96% of participants ≈7.3 y after enrollment. Results: The study intervention achieved a large between-group difference in dietary pattern that, at 4 y, was not significantly different across baseline quartiles of dietary pattern. The intervention group experienced fewer breast cancer events than did the comparison group for all of the baseline quartiles. This difference was significant only in upper baseline quartiles of intake of vegetables, fruit, and fiber and in the lowest quartile of fat. A significant trend for fewer breast cancer events was observed across quartiles of vegetable-fruit and fiber consumption. Conclusions: The secondary analysis showing the decreased risk in the HF− subgroup was not explained by amount of change in dietary pattern achieved. The difference was strongest in the quartile with the most putatively cancer-preventive dietary pattern at baseline. PMID:19339393
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Teo, Cherlyen; Colega, Marjorelee T.; Chen, Ling-Wei; Fok, Doris; Pang, Wei Wei; Yap, Fabian; Shek, Lynette Pei-Chi; Chong, Yap-Seng; Meaney, Michael; Chen, Helen; Chong, Mary Foong-Fong
2018-01-01
Diet in the first month postpartum, otherwise known as “the confinement diet” in Asia, has unique characteristics that are influenced by traditions, cultures, and beliefs. We aimed to characterize dietary patterns during confinement period in a multi-ethnic Asian cohort and examined their associations with postpartum depression (PPD) and anxiety (PPA). Dietary intakes of 490 women were ascertained in the first month postpartum using 3-day food diaries and dietary patterns were derived by factor analysis. Participants completed the Edinburgh Postnatal Depression Scale (EPDS) and State-Trait Anxiety Inventory (STAI) at three months’ postpartum; higher scores are indicative of more depressive and anxiety symptoms, respectively. Four dietary patterns were identified: Traditional-Chinese-Confinement diet, Traditional-Indian-Confinement diet, Eat-Out diet and Soup-Vegetables-Fruits diet. The Traditional-Indian-Confinement diet was associated with less PPD symptoms [β (95% CI) −0.62 (−1.16, −0.09) EPDS score per SD increase in diet score] and a non-significant trend with reduced probable PPD (EPDS scores ≥ 13) [OR (95% CI) 0.56 (0.31, 1.01)]. The Soup-Vegetables-Fruits diet was associated with less PPA symptoms [β (95% CI) −1.49 (−2.56, −0.42) STAI-state score]. No associations were observed for other dietary patterns. Independent of ethnicity, adherence to the Traditional-Indian-Confinement diet that is characterized by intake of herbs and legumes, and Soup-Vegetables-Fruits diet high in fruits, vegetables and fish during the postpartum period were associated with less PPD and PPA symptoms, respectively. PMID:29498695
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Wang, Siyuan; Wang, Xiaoyue; Chen, Guangsheng; Yang, Qichun; Wang, Bin; Ma, Yuanxu; Shen, Ming
2017-09-01
Snow cover dynamics are considered to play a key role on spring phenological shifts in the high-latitude, so investigating responses of spring phenology to snow cover dynamics is becoming an increasingly important way to identify and predict global ecosystem dynamics. In this study, we quantified the temporal trends and spatial variations of spring phenology and snow cover across the Tibetan Plateau by calibrating and analyzing time series of the NOAA AVHRR-derived normalized difference vegetation index (NDVI) during 1983-2012. We also examined how snow cover dynamics affect the spatio-temporal pattern of spring alpine vegetation phenology over the plateau. Our results indicated that 52.21% of the plateau experienced a significant advancing trend in the beginning of vegetation growing season (BGS) and 34.30% exhibited a delaying trend. Accordingly, the snow cover duration days (SCD) and snow cover melt date (SCM) showed similar patterns with a decreasing trend in the west and an increasing trend in the southeast, but the start date of snow cover (SCS) showed an opposite pattern. Meanwhile, the spatial patterns of the BGS, SCD, SCS and SCM varied in accordance with the gradients of temperature, precipitation and topography across the plateau. The response relationship of spring phenology to snow cover dynamics varied within different climate, terrain and alpine plant community zones, and the spatio-temporal response patterns were primarily controlled by the long-term local heat-water conditions and topographic conditions. Moreover, temperature and precipitation played a profound impact on diverse responses of spring phenology to snow cover dynamics. Copyright © 2017 Elsevier B.V. All rights reserved.
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NASA Astrophysics Data System (ADS)
Flantua, S. G. A.; Hooghiemstra, H.; Vuille, M.; Behling, H.; Carson, J. F.; Gosling, W. D.; Hoyos, I.; Ledru, M. P.; Montoya, E.; Mayle, F.; Maldonado, A.; Rull, V.; Tonello, M. S.; Whitney, B. S.; González-Arango, C.
2016-02-01
An improved understanding of present-day climate variability and change relies on high-quality data sets from the past 2 millennia. Global efforts to model regional climate modes are in the process of being validated against, and integrated with, records of past vegetation change. For South America, however, the full potential of vegetation records for evaluating and improving climate models has hitherto not been sufficiently acknowledged due to an absence of information on the spatial and temporal coverage of study sites. This paper therefore serves as a guide to high-quality pollen records that capture environmental variability during the last 2 millennia. We identify 60 vegetation (pollen) records from across South America which satisfy geochronological requirements set out for climate modelling, and we discuss their sensitivity to the spatial signature of climate modes throughout the continent. Diverse patterns of vegetation response to climate change are observed, with more similar patterns of change in the lowlands and varying intensity and direction of responses in the highlands. Pollen records display local-scale responses to climate modes; thus, it is necessary to understand how vegetation-climate interactions might diverge under variable settings. We provide a qualitative translation from pollen metrics to climate variables. Additionally, pollen is an excellent indicator of human impact through time. We discuss evidence for human land use in pollen records and provide an overview considered useful for archaeological hypothesis testing and important in distinguishing natural from anthropogenically driven vegetation change. We stress the need for the palynological community to be more familiar with climate variability patterns to correctly attribute the potential causes of observed vegetation dynamics. This manuscript forms part of the wider LOng-Term multi-proxy climate REconstructions and Dynamics in South America - 2k initiative that provides the ideal framework for the integration of the various palaeoclimatic subdisciplines and palaeo-science, thereby jump-starting and fostering multidisciplinary research into environmental change on centennial and millennial timescales.
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Suepa, Tanita; Qi, Jiaguo; Lawawirojwong, Siam; Messina, Joseph P
2016-05-01
The spatio-temporal characteristics of remote sensing are considered to be the primary advantage in environmental studies. With long-term and frequent satellite observations, it is possible to monitor changes in key biophysical attributes such as phenological characteristics, and relate them to climate change by examining their correlations. Although a number of remote sensing methods have been developed to quantify vegetation seasonal cycles using time-series of vegetation indices, there is limited effort to explore and monitor changes and trends of vegetation phenology in the Monsoon Southeast Asia, which is adversely affected by changes in the Asian monsoon climate. In this study, MODIS EVI and TRMM time series data, along with field survey data, were analyzed to quantify phenological patterns and trends in the Monsoon Southeast Asia during 2001-2010 period and assess their relationship with climate change in the region. The results revealed a great regional variability and inter-annual fluctuation in vegetation phenology. The phenological patterns varied spatially across the region and they were strongly correlated with climate variations and land use patterns. The overall phenological trends appeared to shift towards a later and slightly longer growing season up to 14 days from 2001 to 2010. Interestingly, the corresponding rainy season seemed to have started earlier and ended later, resulting in a slightly longer wet season extending up to 7 days, while the total amount of rainfall in the region decreased during the same time period. The phenological shifts and changes in vegetation growth appeared to be associated with climate events such as EL Niño in 2005. Furthermore, rainfall seemed to be the dominant force driving the phenological changes in naturally vegetated areas and rainfed croplands, whereas land use management was the key factor in irrigated agricultural areas. Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.
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Sammy L. King; Terry J. Antrobus; Sarah Billups
2000-01-01
A disturbance can be defined as "any relatively discrete event in time that disrupts ecosystem, community, or population structure and changes resources, substrate availability, or the physical environment" (Pickett and White 1985). Vegetation dynamics are a function of the temporal and spatial patterns of the disturbance regime. Natural disturbance regimes...
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Successional forest dynamics 30 years following clearcutting
Lindsay R. Boring; Katherine J. Elliott; Wayne T. Swank
2014-01-01
For the past several decades, clearcuts on experimental watersheds have provided an opportunity to examine how these large-scale forest disturbances influence various ecosystem processes, including stream hydrology, soil eriosion, nutrient cycling, and vegetation diversity and successional patterns. For the investigation of vegetation diversity and successional...
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A Guide to Energy Savings - For the Vegetable Producer.
ERIC Educational Resources Information Center
Wynn, N. A.
This booklet gives a brief overview of energy use patterns in vegetable production and gives examples of cutting the cost of energy in fertilization, weed management, insect pest management, irrigation, harvesting, use of equipment, and greenhouses. Finally, energy use recordkeeping is discussed. (BB)
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Forage quantity estimation from MERIS using band depth parameters
NASA Astrophysics Data System (ADS)
Ullah, Saleem; Yali, Si; Schlerf, Martin
Saleem Ullah1 , Si Yali1 , Martin Schlerf1 Forage quantity is an important factor influencing feeding pattern and distribution of wildlife. The main objective of this study was to evaluate the predictive performance of vegetation indices and band depth analysis parameters for estimation of green biomass using MERIS data. Green biomass was best predicted by NBDI (normalized band depth index) and yielded a calibration R2 of 0.73 and an accuracy (independent validation dataset, n=30) of 136.2 g/m2 (47 % of the measured mean) compared to a much lower accuracy obtained by soil adjusted vegetation index SAVI (444.6 g/m2, 154 % of the mean) and by other vegetation indices. This study will contribute to map and monitor foliar biomass over the year at regional scale which intern can aid the understanding of bird migration pattern. Keywords: Biomass, Nitrogen density, Nitrogen concentration, Vegetation indices, Band depth analysis parameters 1 Faculty of Geo-Information Science and Earth Observation (ITC), University of Twente, The Netherlands
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Golezardy, Habib; Oosthuizen, Marinda C; Penzhorn, Barend L
2016-07-01
Ticks were collected from 191 cheetahs at three breeding centres in North West and Limpopo Provinces, South Africa. Haemaphysalis elliptica, a common tick of large felids, was the most abundant species collected, while Amblyomma hebraeum and Rhipicephalus simus occurred in lower numbers. In addition to these three species, drag-sampling of the vegetation revealed the presence of Amblyomma marmoreum, Rhipicephalus (B.) decoloratus and Rhipicephalus zambeziensis. The presence of free-ranging antelopes, murid rodents and tortoises at the breeding centres probably contributed to the availability of immature tick stages on the vegetation. Diurnal and seasonal questing patterns of ixodid ticks were investigated at monthly intervals at the largest cheetah-breeding centre. Questing ticks were most abundant on the vegetation during the warm summer months. Most questing H. elliptica larvae and nymphs were collected from the vegetation in the early morning and late afternoon and fewest during the middle of the day. Copyright © 2016 Elsevier GmbH. All rights reserved.
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DOE Office of Scientific and Technical Information (OSTI.GOV)
Zolbrod, A.N.; Peterson, D.L.
1995-06-01
Subalpine and alpine vegetation may be particularly sensitive to climatic change, such as expected temperature increases and altered precipitation patterns with global warming. The gap replacement model ZELIG was modified and used to examine transient and steady-state changes in altitudinal treeline, tree species distribution, and forest structure and composition along elevation gradients in the Olympic Mountains, Washington, under a range of temperature and precipitation changes. Changes in vegetation pattern were examined for north vs. south aspects, and wet (southwest) vs. dry (northeast) regions of the mountains. The seedling establishment subroutine in ZELIG was improved to specifically model the complexities ofmore » tree invasion in subalpine meadows and include empirical data. A function allowing for stand replacement fire was also added in order to examine the role of altered disturbance regimes on vegetation change. Results indicate that distribution of tree species will change under various climate change scenarios, but future elevation of treeline depends greatly on precipitation levels, disturbance frequency, and aspect.« less
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Dewey, M.R.; Richardson, W.B.; Zigler, S.J.
1997-01-01
We studied the trophic interactions and spatial distributions of bluegills Lepomis macrochirus and largemouth bass Micropterus salmoides in a macrophyte bed in Lake Onalaska, a backwater lake in the upper Mississippi River. The diets of adult and age-0 bluegills were similar and changed seasonally probably in response to changes in life stages of macroinvertebrates (i.e. emergence of winged adults). Diets and diel patterns of abundance of bluegill suggest that age-0 and adults were feeding in the vegetated, littoral zone. Predation by age-0 largemouth bass appears to influence use of vegetated habitat by age-0 bluegills. In summer, when most age-0 bluegills were vulnerable to predation by age-0 largemouth bass, bluegill abundance was strongly correlated with vegetation biomass. In October and November, piscivory by age-0 largemouth bass was limited by gape. Consequently, the relationship between the abundance of age-0 bluegills and vegetation biomass was weakened because predation risk by age-0 largemouth bass was reduced.
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Habitat selection by a focal predator (Canis lupus) in a multiprey ecosystem of the northern Rockies
Milakovic, B.; Parker, K.L.; Gustine, D.D.; Lay, R.J.; Walker, A.B.D.; Gillingham, M.P.
2011-01-01
Large predators respond to land cover and physiography that maximize the likelihood of encountering prey. Using locations from global positioning system-collared wolves (Canis lupus), we examined whether land cover, vegetation productivity or change, or habitat-selection value for ungulate prey species themselves most influenced patterns of selection by wolves in a large, intact multiprey system of northern British Columbia. Selection models based on land cover, in combination with topographical features, consistently outperformed models based on indexes of vegetation quantity and quality (using normalized difference vegetation index) or on selection value to prey species (moose [Alces americanus], elk [Cervus elaphus], woodland caribou [Rangifer tarandus], and Stone's sheep [Ovis dalli stonei]). Wolves generally selected for shrub communities and high diversity of cover across seasons and avoided conifer stands and non-vegetated areas and west aspects year-round. Seasonal selection strategies were not always reflected in use patterns, which showed highest frequency of use in riparian, shrub, and conifer classes. Patterns of use and selection for individual wolf packs did not always conform to global models, and appeared related to the distribution of land cover and terrain within respective home ranges. Our findings corroborate the biological linkages between wolves and their habitat related to ease of movement and potential prey associations. ?? American 2011 Society of Mammalogists.
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The pace of Holocene vegetation change - testing for synchronous developments
NASA Astrophysics Data System (ADS)
Giesecke, Thomas; Bennett, K. D.; Birks, H. John B.; Bjune, Anne E.; Bozilova, Elisaveta; Feurdean, Angelica; Finsinger, Walter; Froyd, Cynthia; Pokorný, Petr; Rösch, Manfred; Seppä, Heikki; Tonkov, Spasimir; Valsecchi, Verushka; Wolters, Steffen
2011-09-01
Mid to high latitude forest ecosystems have undergone several major compositional changes during the Holocene. The temporal and spatial patterns of these vegetation changes hold potential information to their causes and triggers. Here we test the hypothesis that the timing of vegetation change was synchronous on a sub-continental scale, which implies a common trigger or a step-like change in climate parameters. Pollen diagrams from selected European regions were statistically divided into assemblage zones and the temporal pattern of the zone boundaries analysed. The results show that the temporal pattern of vegetation change was significantly different from random. Times of change cluster around 8.2, 4.8, 3.7, and 1.2 ka, while times of higher than average stability were found around 2.1 and 5.1 ka. Compositional changes linked to the expansion of Corylus avellana and Alnus glutinosa centre around 10.6 and 9.5 ka, respectively. A climatic trigger initiating these changes may have occurred 0.5 to 1 ka earlier, respectively. The synchronous expansion of C. avellana and A. glutinosa exemplify that dispersal is not necessarily followed by population expansion. The partly synchronous, partly random expansion of A. glutinosa in adjacent European regions exemplifies that sudden synchronous population expansions are not species specific traits but vary regionally.
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Immigration and dietary patterns in South Asian Canadians at risk for diabetes.
Kandola, Kirandeep; Sandhu, Supna; Tang, Tricia
To examine the relationship between immigration and dietary patterns among South Asian adults at risk for diabetes and living in Canada. We recruited 428 South Asian adults affiliated with Sikh and Hindu temples in Metro Vancouver. Of the total sample, 422 completed self-report surveys including demographic background information, and two brief food screeners (fruit/vegetable/fiber intake and fat intake). Food screeners were culturally tailored to include traditional foods consumed in the South Asian community. Multiple linear regressions examined the relationship between diet and immigration. All models were adjusted for age, sex, marital status, education, income, and employment. Participants reported low levels of meat, fruit and vegetable consumption. Intake of whole milk products, traditional South Asian desserts and snacks were relatively high in comparison to other fat-containing food items. Specific trends in diet were seen in relation to time following immigration with the longer duration of years living in Canada the greater consumption of fruit/vegetable/fiber, non-starchy vegetables, total fat and meat reported; and lower intake of whole milk. Acculturation appears to influence some dietary patterns in our sample of South Asian Canadian adults. These findings should be considered when designing culturally tailored lifestyle modification interventions for this community. Copyright © 2016 Elsevier Inc. All rights reserved.
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Leatham, Gary F.
1985-01-01
Although the commercially important mushroom Lentinus (= Lentinula) edodes (Berk.) Sing. can be rapidly cultivated on supplemented wood particles, fruiting is not reliable. This study addressed the problem by developing more information about growth and development on a practical oakwood-oatmeal medium. The study determined (i) the components degraded during a 150-day incubation at 22°C, (ii) the apparent vegetative growth pattern, (iii) the likely growth-limiting nutrient, and (iv) assays that can be used to study key extracellular enzymes. All major components of the medium were degraded, lignin selectively so. The vegetative growth rate was most rapid during the initial 90 days, during which weight loss correlated with glucosamine accumulation (assayed after acid hydrolysis). The rate then slowed; in apparent preparation for fruiting, the cultures rapidly accumulated glucosamine (or its oligomer or polymer). Nitrogen was growth limiting. Certain enzyme activities were associated with the pattern of medium degradation, with growth, or with development. They included cellulolytic system enzymes, hemicellulases, the ligninolytic system, (gluco-)amylase, pectinase, acid protease, cell wall lytic enzymes (laminarinase, 1,4-β-d-glucosidase, β-N-acetyl-d-glucosaminidase, α-d-galactosidase, β-d-mannosidase), acid phosphatase, and laccase. Enzyme activities over the 150-day incubation period with and without a fruiting stimulus are reported. These results provide a basis for future investigations into the physiology and biochemistry of growth and fruiting. PMID:16346918
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Mueller, Thomas; Olson, K.A.; Dressler, G.; Leimgruber, Peter; Fuller, Todd K.; Nicholson, Craig; Novaro, A.J.; Bolgeri, M.J.; Wattles, David W.; DeStefano, Stephen; Calabrese, J.M.; Fagan, William F.
2011-01-01
Aim To demonstrate how the interrelations of individual movements form large-scale population-level movement patterns and how these patterns are associated with the underlying landscape dynamics by comparing ungulate movements across species.Locations Arctic tundra in Alaska and Canada, temperate forests in Massachusetts, Patagonian Steppes in Argentina, Eastern Steppes in Mongolia.Methods We used relocation data from four ungulate species (barren-ground caribou, Mongolian gazelle, guanaco and moose) to examine individual movements and the interrelation of movements among individuals. We applied and developed a suite of spatial metrics that measure variation in movement among individuals as population dispersion, movement coordination and realized mobility. Taken together, these metrics allowed us to quantify and distinguish among different large-scale population-level movement patterns such as migration, range residency and nomadism. We then related the population-level movement patterns to the underlying landscape vegetation dynamics via long-term remote sensing measurements of the temporal variability, spatial variability and unpredictability of vegetation productivity.Results Moose, which remained in sedentary home ranges, and guanacos, which were partially migratory, exhibited relatively short annual movements associated with landscapes having very little broad-scale variability in vegetation. Caribou and gazelle performed extreme long-distance movements that were associated with broad-scale variability in vegetation productivity during the peak of the growing season. Caribou exhibited regular seasonal migration in which individuals were clustered for most of the year and exhibited coordinated movements. In contrast, gazelle were nomadic, as individuals were independently distributed and moved in an uncoordinated manner that relates to the comparatively unpredictable (yet broad-scale) vegetation dynamics of their landscape.Main conclusions We show how broad-scale landscape unpredictability may lead to nomadism, an understudied type of long-distance movement. In contrast to classical migration where landscapes may vary at broad scales but in a predictable manner, long-distance movements of nomadic individuals are uncoordinated and independent from other such individuals. Landscapes with little broad-scale variability in vegetation productivity feature smaller-scale movements and allow for range residency. Nomadism requires distinct integrative conservation strategies that facilitate long-distance movements across the entire landscape and are not limited to certain migration corridors.
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Mueller, T.; Olson, K.A.; Dressler, G.; Leimgruber, P.; Fuller, T.K.; Nicolson, C.; Novaro, A.J.; Bolgeri, M.J.; Wattles, David W.; DeStefano, S.; Calabrese, J.M.; Fagan, W.F.
2011-01-01
Aim To demonstrate how the interrelations of individual movements form large-scale population-level movement patterns and how these patterns are associated with the underlying landscape dynamics by comparing ungulate movements across species. Locations Arctic tundra in Alaska and Canada, temperate forests in Massachusetts, Patagonian Steppes in Argentina, Eastern Steppes in Mongolia. Methods We used relocation data from four ungulate species (barren-ground caribou, Mongolian gazelle, guanaco and moose) to examine individual movements and the interrelation of movements among individuals. We applied and developed a suite of spatial metrics that measure variation in movement among individuals as population dispersion, movement coordination and realized mobility. Taken together, these metrics allowed us to quantify and distinguish among different large-scale population-level movement patterns such as migration, range residency and nomadism. We then related the population-level movement patterns to the underlying landscape vegetation dynamics via long-term remote sensing measurements of the temporal variability, spatial variability and unpredictability of vegetation productivity. Results Moose, which remained in sedentary home ranges, and guanacos, which were partially migratory, exhibited relatively short annual movements associated with landscapes having very little broad-scale variability in vegetation. Caribou and gazelle performed extreme long-distance movements that were associated with broad-scale variability in vegetation productivity during the peak of the growing season. Caribou exhibited regular seasonal migration in which individuals were clustered for most of the year and exhibited coordinated movements. In contrast, gazelle were nomadic, as individuals were independently distributed and moved in an uncoordinated manner that relates to the comparatively unpredictable (yet broad-scale) vegetation dynamics of their landscape. Main conclusions We show how broad-scale landscape unpredictability may lead to nomadism, an understudied type of long-distance movement. In contrast to classical migration where landscapes may vary at broad scales but in a predictable manner, long-distance movements of nomadic individuals are uncoordinated and independent from other such individuals. Landscapes with little broad-scale variability in vegetation productivity feature smaller-scale movements and allow for range residency. Nomadism requires distinct integrative conservation strategies that facilitate long-distance movements across the entire landscape and are not limited to certain migration corridors. ?? 2011 Blackwell Publishing Ltd.
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Diverse Responses of Global Vegetation to Climate Changes: Spatial Patterns and Time-lag Effects
NASA Astrophysics Data System (ADS)
Wu, D.; Zhao, X.; Zhou, T.; Huang, K.; Xu, W.
2014-12-01
Global climate changes have enormous influences on vegetation growth, meanwhile, response of vegetation to climate express space diversity and time-lag effects, which account for spatial-temporal disparities of climate change and spatial heterogeneity of ecosystem. Revelation of this phenomenon will help us further understanding the impact of climate change on vegetation. Assessment and forecast of global environmental change can be also improved under further climate change. Here we present space diversity and time-lag effects patterns of global vegetation respond to three climate factors (temperature, precipitation and solar radiation) based on quantitative analysis of satellite data (NDVI) and Climate data (Climate Research Unit). We assessed the time-lag effects of global vegetation to main climate factors based on the great correlation fitness between NDVI and the three climate factors respectively among 0-12 months' temporal lags. On this basis, integrated response model of NDVI and the three climate factors was built to analyze contribution of different climate factors to vegetation growth with multiple regression model and partial correlation model. In the result, different vegetation types have distinct temporal lags to the three climate factors. For the precipitation, temporal lags of grasslands are the shortest while the evergreen broad-leaf forests are the longest, which means that grasslands are more sensitive to precipitation than evergreen broad-leaf forests. Analysis of different climate factors' contribution to vegetation reveal that vegetation are dominated by temperature in the high northern latitudes; they are mainly restricted by precipitation in arid and semi-arid areas (Australia, Western America); in humid areas of low and intermediate latitudes (Amazon, Eastern America), vegetation are mainly influenced by solar radiation. Our results reveal the time-lag effects and major driving factors of global vegetation growth and explain the spatiotemporal variations of global vegetation in last 30 years. Significantly, it is as well as in forecasting and assessing the influences of future climate change on the vegetation dynamics. This work was supported by the High Technology Research and Development Program of China (Grant NO.2013AA122801).
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Petrik, Deborah L.; Cass, Cynthia L.; Padmakshan, Dharshana; ...
2016-02-04
Utility vectors with promoters that confer desired spatial and temporal expression patterns are useful tools for studying gene and cellular function and for industrial applications. To target the expression of DNA sequences of interest to cells forming plant secondary cell walls, which generate most of the vegetative biomass, upstream regulatory sequences of the Brachypodium distachyon lignin biosynthetic gene BdPMT and the cellulose synthase genes BdCESA7 and BdCESA8 were isolated and cloned into binary vectors designed for Agrobacterium-mediated transformation of monocots. Expression patterns were assessed using the β-glucuronidase gene GUSPlus and X-glucuronide staining. All three promoters showed strong expression levels inmore » stem tissue at the base of internodes where cell wall deposition is most active, in both vascular bundle xylem vessels and tracheids, and in interfascicular tissues, with expression less pronounced in developmentally older tissues. In leaves, BdCESA7 and BdCESA8 promoter-driven expression was strongest in leaf veins, leaf margins, and trichomes; relatively weaker and patchy expression was observed in the epidermis. BdPMT promoter-driven expression was similar to the BdCESA promoters expression patterns, including strong expression in trichomes. The intensity and extent of GUS staining varied considerably between transgenic lines, suggesting that positional effects influenced promoter activity. Introducing the BdPMT and BdCESA8 Open Reading Frames into BdPMT and BdCESA8 utility promoter binary vectors, respectively, and transforming those constructs into Brachypodium pmt and cesa8 loss-of-function mutants resulted in rescue of the corresponding mutant phenotypes. This work therefore validates the functionality of these utility promoter binary vectors for use in Brachypodium and likely other grass species. Lastly, the identification, in Bdcesa8-1 T-DNA mutant stems, of an 80% reduction in crystalline cellulose levels confirms that the BdCESA8 gene is a secondary-cell-wall-forming cellulose synthase.« less
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DOE Office of Scientific and Technical Information (OSTI.GOV)
Petrik, Deborah L.; Cass, Cynthia L.; Padmakshan, Dharshana
Utility vectors with promoters that confer desired spatial and temporal expression patterns are useful tools for studying gene and cellular function and for industrial applications. To target the expression of DNA sequences of interest to cells forming plant secondary cell walls, which generate most of the vegetative biomass, upstream regulatory sequences of the Brachypodium distachyon lignin biosynthetic gene BdPMT and the cellulose synthase genes BdCESA7 and BdCESA8 were isolated and cloned into binary vectors designed for Agrobacterium-mediated transformation of monocots. Expression patterns were assessed using the β-glucuronidase gene GUSPlus and X-glucuronide staining. All three promoters showed strong expression levels inmore » stem tissue at the base of internodes where cell wall deposition is most active, in both vascular bundle xylem vessels and tracheids, and in interfascicular tissues, with expression less pronounced in developmentally older tissues. In leaves, BdCESA7 and BdCESA8 promoter-driven expression was strongest in leaf veins, leaf margins, and trichomes; relatively weaker and patchy expression was observed in the epidermis. BdPMT promoter-driven expression was similar to the BdCESA promoters expression patterns, including strong expression in trichomes. The intensity and extent of GUS staining varied considerably between transgenic lines, suggesting that positional effects influenced promoter activity. Introducing the BdPMT and BdCESA8 Open Reading Frames into BdPMT and BdCESA8 utility promoter binary vectors, respectively, and transforming those constructs into Brachypodium pmt and cesa8 loss-of-function mutants resulted in rescue of the corresponding mutant phenotypes. This work therefore validates the functionality of these utility promoter binary vectors for use in Brachypodium and likely other grass species. Lastly, the identification, in Bdcesa8-1 T-DNA mutant stems, of an 80% reduction in crystalline cellulose levels confirms that the BdCESA8 gene is a secondary-cell-wall-forming cellulose synthase.« less
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Unravelling spatio-temporal evapotranspiration patterns in topographically complex landscapes
NASA Astrophysics Data System (ADS)
Metzen, Daniel; Sheridan, Gary; Nyman, Petter; Lane, Patrick
2016-04-01
Vegetation co-evolves with soils and topography under a given long-term climatic forcing. Previous studies demonstrated a strong eco-hydrologic feedback between topography, vegetation and energy and water fluxes. Slope orientation (aspect and gradient) alter the magnitude of incoming solar radiation resulting in larger evaporative losses and less water availability on equator-facing slopes. Furthermore, non-local water inputs from upslope areas potentially contribute to available water at downslope positions. The combined effect of slope orientation and drainage position creates complex spatial patterns in biological productivity and pedogenesis, which in turn alter the local hydrology. In complex upland landscapes, topographic alteration of incoming radiation can cause substantial aridity index (ratio of potential evapotranspiration to precipitation) variations over small spatial extents. Most of the upland forests in south-east Australia are located in an aridity index (AI) range of 1-2, around the energy limited to water limited boundary, where forested systems are expected to be most sensitive to AI changes. In this research we aim to improve the fundamental understanding of spatio-temporal evolution of evapotranspiration (ET) patterns in complex terrain, accounting for local topographic effects on system properties (e.g. soil depth, sapwood area, leaf area) and variation in energy and water exchange processes due to slope orientation and drainage position. Six measurement plots were set-up in a mixed species eucalypt forest on a polar and equatorial-facing hillslope (AI ˜1.3 vs. 1.8) at varying drainage position (ridge, mid-slope, gully), while minimizing variations in other factors, e.g. geology and weather patterns. Sap flow, soil water content, incoming solar radiation and throughfall were continuously monitored at field sites spanning a wide range of soil depth (0.5 - >3m), maximum tree heights (17 - 51m) and LAI (1.2 - 4.6). Site-specific response curves of vapour pressure deficit and sap velocity emerged in relation to landscape position from spring until autumn, while the relationship collapsed into a single curve in winter. These patterns were amplified by more sapwood area per ha in wetter locations compared to drier locations. Topographically downscaled (20x20m pixels) monthly AI values were significantly correlated with monthly observations of sap velocity (R2 of 0.54 - 0.91) for all landscape positions except the equator-facing ridge position. Moreover, spatial vegetation and sap velocity patterns could be predicted using AI, topographic wetness index and elevation above stream (R2 of 0.67 and 0.59, respectively). Our findings emphasise the co-dependence of climate, topography and vegetation, and the need of a more holistic approach that includes terrain and vegetation characteristics to explain ET patterns. Our strong correlations with vegetation patterns and sap velocities demonstrate the potential use of spatially mappable climatic and topographic information to scale ET fluxes in complex terrain, and we anticipate that this approach is applicable across a wide range of ecosystems.
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NASA Astrophysics Data System (ADS)
Brooks, P. D.; Swetnam, T. L.; Barnard, H. R.; Singha, K.; Harpold, A.; Litvak, M. E.
2017-12-01
Spatial patterns in vegetation long have been used to scale both landsurface-atmosphere exchanges of water and carbon as well as to infer subsurface structure. These pursuits typical proceed in isolation and rarely do inferences gained from one community propagate to related efforts in another. Perhaps more importantly, vegetation often is treated as an emergent property of landscape-climate interactions rather than an active modifier of both critical zone structure and energy fluxes. We posit that vegetation structure and activity are under utilized as a tool towards understanding landscape evolution and present examples that begin to disentangle the role of vegetation as both an emergent property and an active control on critical zone structure and function. As climate change, population growth, and land use changes threaten water resources worldwide, the need for the new insights vegetation can provide becomes not just a basic science priority, but a pressing applied science question with clear societal importance. This presentation will provide an overview of recent efforts to address the dual role of vegetation in both modifying and reflecting critical zone structure in the western North American forests. For example, interactions between topography and stand scale vegetation structure influence both solar radiation and turbulence altering landscape scale partitioning of evaporation vs transpiration with major impacts of surface water supply. Similarly, interactions between topographic shading, lateral redistribution of plant available water, and subsurface storage create a mosaic of drought resistance and resilience across complex terrain. These complex interactions between geophysical and vegetation components of critical zone structure result in predictable patterns in catchment scale hydrologic partitioning within individual watersheds while simultaneously suggesting testable hypotheses for why catchments under similar climate regimes respond so differently to drought stress.
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Kent, Rafi; Levanoni, Oded; Banker, Eran; Pe'er, Guy; Kark, Salit
2013-01-01
Mountains provide an opportunity to examine changes in biodiversity across environmental gradients and areas of transition (ecotones). Mountain ecotones separate vegetation belts. Here, we aimed to examine whether transition areas for birds and butterflies spatially correspond with ecotones between three previously described altitudinal vegetation belts on Mt. Hermon, northern Israel. These include the Mediterranean Maquis, xero-montane open forest and Tragacanthic mountain steppe vegetation belts. We sampled the abundance of bird and butterfly species in 34 sampling locations along an elevational gradient between 500 and 2200 m. We applied wombling, a boundary-detection technique, which detects rapid changes in a continuous variable, in order to locate the transition areas for bird and butterfly communities and compare the location of these areas with the location of vegetation belts as described in earlier studies of Mt. Hermon. We found some correspondence between the areas of transition of both bird and butterfly communities and the ecotones between vegetation belts. For birds and butterflies, important transitions occurred at the lower vegetation ecotone between Mediterranean maquis and the xero-montane open forest vegetation belts, and between the xero-montane open forest and the mountain steppe Tragacanthic belts. While patterns of species turnover with elevation were similar for birds and butterflies, the change in species richness and diversity with elevation differed substantially between the two taxa. Birds and butterflies responded quite similarly to the elevational gradient and to the shift between vegetation belts in terms of species turnover rates. While the mechanisms generating these patterns may differ, the resulting areas of peak turnover in species show correspondence among three different taxa (plants, birds and butterflies).
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[Influences of land using patterns on the anti-wind erosion of meadow grassland].
Zhou, Yao-Zhi; Wang-Xu; Yang, Gui-Xia; Xin, Xiao-Ping
2008-05-01
In order to analyse the effects of the human disturbances to the ability of anti-wind erosion of the Hulunbuir meadow grassland, the methods of vegetation investigation and the wind tunnel experiment were made to research the changes of vegetation and the abilities of anti-wind erosion of meadow grassland under different using patterns of meadow grassland. The results indicate that, under different grazing intensities of meadow grassland, the critical wind velocity of soil erosion (v) changes with the vegetation cover according to the relation of second power function. Along with the grazing intensities increasing and the vegetation cover reducing, the velocity of soil erosion rapidly increased on the condition of similar wind velocity which is speedier than the critical wind velocity of soil erosion. When the meadow grassland is mildly grazed which the vegetation cover maintains 63%, the velocity of soil erosion is small even there is gale that the wind velocity reach 25 m/s. When the vegetation cover of meadow grassland reduced to less than 35%, the velocity of soil erosion rapidly increased with the vegetation cover's reducing on the condition of the wind velocity is among 20-25 m/s. And owing to the no-tillage cropland of meadow grassland is completely far from the protection of the vegetation, the soil wind erosion quantity achieves 682.1 kg/hm2 in a minute when the wind velocity is 25 m/s, which approaches the average formation quantity of soil (1 000 kg/hm2) in a year.
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Geoghegan, Ivey A; Gurr, Sarah J
2017-09-01
Chitin deacetylation results in the formation of chitosan, a polymer of β1,4-linked glucosamine. Chitosan is known to have important functions in the cell walls of a number of fungal species, but its role during hyphal growth has not yet been investigated. In this study, we have characterized the role of chitin deacetylation during vegetative hyphal growth in the filamentous phytopathogen Magnaporthe oryzae. We found that chitosan localizes to the septa and lateral cell walls of vegetative hyphae and identified 2 chitin deacetylases expressed during vegetative growth-CDA1 and CDA4. Deletion strains and fluorescent protein fusions demonstrated that CDA1 is necessary for chitin deacetylation in the septa and lateral cell walls of mature hyphae in colony interiors, whereas CDA4 deacetylates chitin in the hyphae at colony margins. However, although the Δcda1 strain was more resistant to cell wall hydrolysis, growth and pathogenic development were otherwise unaffected in the deletion strains. The role of chitosan hydrolysis was also investigated. A single gene encoding a putative chitosanase (CSN) was discovered in M. oryzae and found to be expressed during vegetative growth. However, chitosan localization, vegetative growth, and pathogenic development were unaffected in a CSN deletion strain, rendering the role of this enzyme unclear. © 2017 The Authors Cellular Microbiology Published by John Wiley & Sons Ltd.
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Estimating urban vegetation fraction across 25 cities in pan-Pacific using Landsat time series data
NASA Astrophysics Data System (ADS)
Lu, Yuhao; Coops, Nicholas C.; Hermosilla, Txomin
2017-04-01
Urbanization globally is consistently reshaping the natural landscape to accommodate the growing human population. Urban vegetation plays a key role in moderating environmental impacts caused by urbanization and is critically important for local economic, social and cultural development. The differing patterns of human population growth, varying urban structures and development stages, results in highly varied spatial and temporal vegetation patterns particularly in the pan-Pacific region which has some of the fastest urbanization rates globally. Yet spatially-explicit temporal information on the amount and change of urban vegetation is rarely documented particularly in less developed nations. Remote sensing offers an exceptional data source and a unique perspective to map urban vegetation and change due to its consistency and ubiquitous nature. In this research, we assess the vegetation fractions of 25 cities across 12 pan-Pacific countries using annual gap-free Landsat surface reflectance products acquired from 1984 to 2012, using sub-pixel, spectral unmixing approaches. Vegetation change trends were then analyzed using Mann-Kendall statistics and Theil-Sen slope estimators. Unmixing results successfully mapped urban vegetation for pixels located in urban parks, forested mountainous regions, as well as agricultural land (correlation coefficient ranging from 0.66 to 0.77). The greatest vegetation loss from 1984 to 2012 was found in Shanghai, Tianjin, and Dalian in China. In contrast, cities including Vancouver (Canada) and Seattle (USA) showed stable vegetation trends through time. Using temporal trend analysis, our results suggest that it is possible to reduce noise and outliers caused by phenological changes particularly in cropland using dense new Landsat time series approaches. We conclude that simple yet effective approaches of unmixing Landsat time series data for assessing spatial and temporal changes of urban vegetation at regional scales can provide critical information for urban planners and anthropogenic studies globally.
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Hope, A.S.; Boynton, W.L.; Stow, D.A.; Douglas, David C.
2003-01-01
Interannual above-ground production patterns are characterized for three tundra ecosystems in the Kuparuk River watershed of Alaska using NOAA-AVHRR Normalized Difference Vegetation Index (NDVI) data. NDVI values integrated over each growing season (SINDVI) were used to represent seasonal production patterns between 1989 and 1996. Spatial differences in ecosystem production were expected to follow north-south climatic and soil gradients, while interannual differences in production were expected to vary with variations in seasonal precipitation and temperature. It was hypothesized that the increased vegetation growth in high latitudes between 1981 and 1991 previously reported would continue through the period of investigation for the study watershed. Zonal differences in vegetation production were confirmed but interannual variations did not covary with seasonal precipitation or temperature totals. A sharp reduction in the SINDVI in 1992 followed by a consistent increase up to 1996 led to a further hypothesis that the interannual variations in SINDVI were associated with variations in stratospheric optical depth. Using published stratospheric optical depth values derived from the SAGE and SAGE-II satellites, it is demonstrated that variations in these depths are likely the primary cause of SINDVI interannual variability.
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Sunyer, Pau; Boixadera, Ester; Muñoz, Alberto; Bonal, Raúl; Espelta, Josep Maria
2015-01-01
The patterns of seedling recruitment in animal-dispersed plants result from the interactions among environmental and behavioral variables. However, we know little on the contribution and combined effect of both kinds of variables. We designed a field study to assess the interplay between environment (vegetation structure, seed abundance, rodent abundance) and behavior (seed dispersal and predation by rodents, and rooting by wild boars), and their contribution to the spatial patterns of seedling recruitment in a Mediterranean mixed-oak forest. In a spatially explicit design, we monitored intensively all environmental and behavioral variables in fixed points at a small spatial scale from autumn to spring, as well as seedling emergence and survival. Our results revealed that the spatial patterns of seedling emergence were strongly related to acorn availability on the ground, but not by a facilitation effect of vegetation cover. Rodents changed seed shadows generated by mother trees by dispersing most seeds from shrubby to open areas, but the spatial patterns of acorn dispersal/predation had no direct effect on recruitment. By contrast, rodents had a strong impact on recruitment as pilferers of cached seeds. Rooting by wild boars also reduced recruitment by reducing seed abundance, but also by changing rodent's behavior towards higher consumption of acorns in situ. Hence, seed abundance and the foraging behavior of scatter-hoarding rodents and wild boars are driving the spatial patterns of seedling recruitment in this mature oak forest, rather than vegetation features. The contribution of vegetation to seedling recruitment (e.g. facilitation by shrubs) may be context dependent, having a little role in closed forests, or being overridden by directed seed dispersal from shrubby to open areas. We warn about the need of using broad approaches that consider the combined action of environment and behavior to improve our knowledge on the dynamics of natural regeneration in forests.
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Boixadera, Ester; Bonal, Raúl
2015-01-01
The patterns of seedling recruitment in animal-dispersed plants result from the interactions among environmental and behavioral variables. However, we know little on the contribution and combined effect of both kinds of variables. We designed a field study to assess the interplay between environment (vegetation structure, seed abundance, rodent abundance) and behavior (seed dispersal and predation by rodents, and rooting by wild boars), and their contribution to the spatial patterns of seedling recruitment in a Mediterranean mixed-oak forest. In a spatially explicit design, we monitored intensively all environmental and behavioral variables in fixed points at a small spatial scale from autumn to spring, as well as seedling emergence and survival. Our results revealed that the spatial patterns of seedling emergence were strongly related to acorn availability on the ground, but not by a facilitationeffect of vegetation cover. Rodents changed seed shadows generated by mother trees by dispersing most seeds from shrubby to open areas, but the spatial patterns of acorn dispersal/predation had no direct effect on recruitment. By contrast, rodents had a strong impact on recruitment as pilferers of cached seeds. Rooting by wild boars also reduced recruitment by reducing seed abundance, but also by changing rodent’s behavior towards higher consumption of acorns in situ. Hence, seed abundance and the foraging behavior of scatter-hoarding rodents and wild boars are driving the spatial patterns of seedling recruitment in this mature oak forest, rather than vegetation features. The contribution of vegetation to seedling recruitment (e.g. facilitation by shrubs) may be context dependent, having a little role in closed forests, or being overridden by directed seed dispersal from shrubby to open areas. We warn about the need of using broad approaches that consider the combined action of environment and behavior to improve our knowledge on the dynamics of natural regeneration in forests. PMID:26070129
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NASA Astrophysics Data System (ADS)
Bedford, D.
2012-12-01
We studied the effects of small-scale roughness on overland flow/runoff and the spatial pattern of infiltration. Our semi-arid sites include a grassland and shrubland in Central New Mexico and a shrubland in the Eastern Mojave Desert. Vegetation exerts strong controls on small-scale surface roughness in the form of plant mounds and other microtopography such as depressions and rills. We quantified the effects of densely measured soil surface heterogeneity using model simulations of runoff and infiltration. Microtopographic roughness associated with vegetation patterns, on the scale of mm-cm's in height, has a larger effect on runoff and infiltration than spatially correlated saturated conductivity. The magnitude and pattern of the effect of roughness largely depends on the vegetation and landform type, and rainfall depth and intensity. In all cases, runoff and infiltration amount and patterns were most strongly affected by depression storage. In the grassland we studied in central New Mexico, soil surface roughness had a large effect on runoff and infiltration where vegetation mounds coalesced, forming large storage volumes that require filling and overtopping in order for overland flow to concentrate into runoff. Total discharge over rough surfaces was reduced 100-200% compared to simulations in which no surface roughness was accounted for. For shrublands, total discharge was reduced 30-40% by microtopography on gently sloping alluvial fans and only 10-20% on steep hillslopes. This difference is largely due to the lack of storage elements on steep slopes. For our sites, we found that overland flow can increase infiltration by up to 2.5 times the total rainfall by filling depressions. The redistribution of water via overland flow can affect up to 20% of an area but varies with vegetation type and landform. This infiltration augmentation by overland flow tends to occur near the edges of vegetation canopies where overland flow depths are deep and infiltration rates are moderate. Infiltration augmentation is greatest in microtopographic depressions and flow threads. These results show that some vegetation-landform settings are efficient at trapping and concentrating the primary limiting resource, and demonstrate the importance of micro-scale soil characteristics for the ecohydrologic function of semi-arid environments. Since other essential attributes for plant ecosystems, such as nutrients, likely co-vary with water availability, further research is needed to elucidate ecosystem dynamics that may lead to self-organized behavior and determine thresholds for ecosystem stability.
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Giotto, Nina; Gerard, Jean-François; Ziv, Alon; Bouskila, Amos; Bar-David, Shirli
2015-01-01
The way in which animals move and use the landscape is influenced by the spatial distribution of resources, and is of importance when considering species conservation. We aimed at exploring how landscape-related factors affect a large herbivore's space-use patterns by using a combined approach, integrating movement (displacement and recursions) and habitat selection analyses. We studied the endangered Asiatic wild ass (Equus hemionus) in the Negev Desert, Israel, using GPS monitoring and direct observation. We found that the main landscape-related factors affecting the species' space-use patterns, on a daily and seasonal basis, were vegetation cover, water sources and topography. Two main habitat types were selected: high-elevation sites during the day (specific microclimate: windy on warm summer days) and streambed surroundings during the night (coupled with high vegetation when the animals were active in summer). Distribution of recursion times (duration between visits) revealed a 24-hour periodicity, a pattern that could be widespread among large herbivores. Characterizing frequently revisited sites suggested that recursion movements were mainly driven by a few landscape features (water sources, vegetation patches, high-elevation points), but also by social factors, such as territoriality, which should be further explored. This study provided complementary insights into the space-use patterns of E. hemionus. Understanding of the species' space-use patterns, at both large and fine spatial scale, is required for developing appropriate conservation protocols. Our approach could be further applied for studying the space-use patterns of other species in heterogeneous landscapes.
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Giotto, Nina; Gerard, Jean-François; Ziv, Alon; Bouskila, Amos; Bar-David, Shirli
2015-01-01
The way in which animals move and use the landscape is influenced by the spatial distribution of resources, and is of importance when considering species conservation. We aimed at exploring how landscape-related factors affect a large herbivore’s space-use patterns by using a combined approach, integrating movement (displacement and recursions) and habitat selection analyses. We studied the endangered Asiatic wild ass (Equus hemionus) in the Negev Desert, Israel, using GPS monitoring and direct observation. We found that the main landscape-related factors affecting the species’ space-use patterns, on a daily and seasonal basis, were vegetation cover, water sources and topography. Two main habitat types were selected: high-elevation sites during the day (specific microclimate: windy on warm summer days) and streambed surroundings during the night (coupled with high vegetation when the animals were active in summer). Distribution of recursion times (duration between visits) revealed a 24-hour periodicity, a pattern that could be widespread among large herbivores. Characterizing frequently revisited sites suggested that recursion movements were mainly driven by a few landscape features (water sources, vegetation patches, high-elevation points), but also by social factors, such as territoriality, which should be further explored. This study provided complementary insights into the space-use patterns of E. hemionus. Understanding of the species’ space-use patterns, at both large and fine spatial scale, is required for developing appropriate conservation protocols. Our approach could be further applied for studying the space-use patterns of other species in heterogeneous landscapes. PMID:26630393
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Calder, W John; Shuman, Bryan
2017-10-01
Ecosystems may shift abruptly when the effects of climate change and disturbance interact, and landscapes with regularly patterned vegetation may be especially vulnerable to abrupt shifts. Here we use a fossil pollen record from a regularly patterned ribbon forest (alternating bands of forests and meadows) in Colorado to examine whether past changes in wildfire and climate produced abrupt vegetation shifts. Comparing the percentages of conifer pollen with sedimentary δ 18 O data (interpreted as an indicator of temperature or snow accumulation) indicates a first-order linear relationship between vegetation composition and climate change with no detectable lags over the past 2,500 yr (r = 0.55, P < 0.001). Additionally, however, we find that the vegetation changed abruptly within a century of extensive wildfires, which were recognized in a previous study to have burned approximately 80% of the surrounding 1,000 km 2 landscape 1,000 yr ago when temperatures rose ~0.5°C. The vegetation change was larger than expected from the effects of climate change alone. Pollen assemblages changed from a composition associated with closed subalpine forests to one similar to modern ribbon forests. Fossil pollen assemblages then remained like those from modern ribbon forests for the following ~1,000 yr, providing a clear example of how extensive disturbances can trigger persistent new vegetation states and alter how vegetation responds to climate. © 2017 by the Ecological Society of America.
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The spectral changes of deforestation in the Brazilian tropical savanna.
Trancoso, Ralph; Sano, Edson E; Meneses, Paulo R
2015-01-01
The Cerrado is a biome in Brazil that is experiencing the most rapid loss in natural vegetation. The objective of this study was to analyze the changes in the spectral response in the red, near infrared (NIR), middle infrared (MIR), and normalized difference vegetation index (NDVI) when native vegetation in the Cerrado is deforested. The test sites were regions of the Cerrado located in the states of Bahia, Minas Gerais, and Mato Grosso. For each region, a pair of Landsat Thematic Mapper (TM) scenes from 2008 (before deforestation) and 2009 (after deforestation) was compared. A set of 1,380 samples of deforested polygons and an equal number of samples of native vegetation have their spectral properties statistically analyzed. The accuracy of deforestation detections was also evaluated using high spatial resolution imagery. Results showed that the spectral data of deforested areas and their corresponding native vegetation were statistically different. The red band showed the highest difference between the reflectance data from deforested areas and native vegetation, while the NIR band showed the lowest difference. A consistent pattern of spectral change when native vegetation in the Cerrado is deforested was identified regardless of the location in the biome. The overall accuracy of deforestation detections was 97.75%. Considering both the marked pattern of spectral changes and the high deforestation detection accuracy, this study suggests that deforestation in Cerrado can be accurately monitored, but a strong seasonal and spatial variability of spectral changes might be expected.
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Visualization of channels connecting cells in filamentous nitrogen-fixing cyanobacteria.
Omairi-Nasser, Amin; Haselkorn, Robert; Austin, Jotham
2014-07-01
Cyanobacteria, formerly called blue-green algae, are abundant bacteria that carry out green plant photosynthesis, fixing CO2 and generating O2. Many species can also fix N2 when reduced nitrogen sources are scarce. Many studies imply the existence of intracellular communicating channels in filamentous cyanobacteria, in particular, the nitrogen-fixing species. In a species such as Anabaena, growth in nitrogen-depleted medium, in which ∼10% of the cells differentiate into anaerobic factories for nitrogen fixation (heterocysts), requires the transport of amino acids from heterocysts to vegetative cells, and reciprocally, the transport of sugar from vegetative cells to heterocysts. Convincing physical evidence for such channels has been slim. Using improved preservation of structure by high-pressure rapid freezing of samples for electron microscopy, coupled with high-resolution 3D tomography, it has been possible to visualize and measure the dimensions of channels that breach the peptidoglycan between vegetative cells and between heterocysts and vegetative cells. The channels appear to be straight tubes, 21 nm long and 14 nm in diameter for the latter and 12 nm long and 12 nm in diameter for the former.-Omairi-Nasser, A., Haselkorn, R., Austin, J. II. Visualization of channels connecting cells in filamentous nitrogen-fixing cyanobacteria. © FASEB.
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NASA Astrophysics Data System (ADS)
Wolf, N.; Siegmund, A.; del Río, C.; Osses, P.; García, J. L.
2016-06-01
In the coastal Atacama Desert in Northern Chile plant growth is constrained to so-called `fog oases' dominated by monospecific stands of the genus Tillandsia. Adapted to the hyperarid environmental conditions, these plants specialize on the foliar uptake of fog as main water and nutrient source. It is this characteristic that leads to distinctive macro- and micro-scale distribution patterns, reflecting complex geo-ecological gradients, mainly affected by the spatiotemporal occurrence of coastal fog respectively the South Pacific Stratocumulus clouds reaching inlands. The current work employs remote sensing, machine learning and spatial pattern/GIS analysis techniques to acquire detailed information on the presence and state of Tillandsia spp. in the Tarapacá region as a base to better understand the bioclimatic and topographic constraints determining the distribution patterns of Tillandsia spp. Spatial and spectral predictors extracted from WorldView-3 satellite data are used to map present Tillandsia vegetation in the Tarapaca region. Regression models on Vegetation Cover Fraction (VCF) are generated combining satellite-based as well as topographic variables and using aggregated high spatial resolution information on vegetation cover derived from UAV flight campaigns as a reference. The results are a first step towards mapping and modelling the topographic as well as bioclimatic factors explaining the spatial distribution patterns of Tillandsia fog oases in the Atacama, Chile.
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Elsbernd, S L; Reicks, M M; Mann, T L; Redden, J P; Mykerezi, E; Vickers, Z M
2016-01-01
Vegetable consumption in the United States is low despite the wealth of evidence that vegetables play an important role in reducing risk of various chronic diseases. Because eating patterns developed in childhood continue through adulthood, we need to form healthy eating habits in children. The objective of this study was to determine if offering vegetables before other meal components would increase the overall consumption of vegetables at school lunch. We served kindergarten through fifth-grade students a small portion (26-33 g) of a raw vegetable (red and yellow bell peppers) while they waited in line to receive the rest of their lunch meal. They then had the options to take more of the bell peppers, a different vegetable, or no vegetable from the lunch line. We measured the amount of each vegetable consumed by each child. Serving vegetables first greatly increased the number of students eating vegetables. On intervention days most of the vegetables consumed came from the vegetables-first portions. Total vegetable intake per student eating lunch was low because most students chose to not eat vegetables, but the intervention significantly increased this value. Serving vegetables first is a viable strategy to increase vegetable consumption in elementary schools. Long-term implementation of this strategy may have an important impact on healthy eating habits, vegetable consumption, and the health consequences of vegetable intake. Copyright © 2015 Elsevier Ltd. All rights reserved.
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Parent outcome expectancies for purchasing fruit and vegetables: a validation.
Baranowski, Tom; Watson, Kathy; Missaghian, Mariam; Broadfoot, Alison; Baranowski, Janice; Cullen, Karen; Nicklas, Theresa; Fisher, Jennifer; O'Donnell, Sharon
2007-03-01
To validate four scales -- outcome expectancies for purchasing fruit and for purchasing vegetables, and comparative outcome expectancies for purchasing fresh fruit and for purchasing fresh vegetables versus other forms of fruit and vegetables (F&V). Survey instruments were administered twice, separated by 6 weeks. Recruited in front of supermarkets and grocery stores; interviews conducted by telephone. One hundred and sixty-one food shoppers with children (18 years or younger). Single dimension scales were specified for fruit and for vegetable purchasing outcome expectancies, and for comparative (fresh vs. other) fruit and vegetable purchasing outcome expectancies. Item Response Theory parameter estimates revealed easily interpreted patterns in the sequence of items by difficulty of response. Fruit and vegetable purchasing and fresh fruit comparative purchasing outcome expectancy scales were significantly correlated with home F&V availability, after controlling for social desirability of response. Comparative fresh vegetable outcome expectancy scale was significantly bivariately correlated with home vegetable availability, but not after controlling for social desirability. These scales are available to help better understand family F&V purchasing decisions.
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Vegetation-terrain feature relationships in southeast Arizona
NASA Technical Reports Server (NTRS)
Schrumpf, B. J. (Principal Investigator); Mouat, D. A.
1972-01-01
There are no author-identified significant results in this report. Studies of relationships of vegetation distribution to geomorphic characteristics of the landscape and of plant phenological patterns to vegetation identification of satellite imagery indicate that there exists positive relationships between certain plant species and certain terrain features. Not all species were found to exhibit positive relationships with all terrain feature variables, but enough positive relationships seem to exist to indicate that terrain feature variable-vegetation relationship studies have a definite place in plant ecological investigations. Even more importantly, the vegetation groups examined appeared to be successfully discriminated by the terrain feature variables. This would seem to indicate that spatial interpretations of vegetation groups may be possible. While vegetational distributions aren't determined by terrain feature differences, terrain features do mirror factors which directly influence vegetational response and hence distribution. As a result, those environmental features which can be readily and rapidly ascertained on relatively small-scale imagery may prove to be valuable indicators of vegetation distribution.
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USDA-ARS?s Scientific Manuscript database
Technical Abstract Occurrence of a wetter and cooler climate associated with humid vegetation had been inferred for the Caatinga region during the late Pleistocene and early Holocene. The existence of rainforest migration routes in northeastern Brazil is widely recognized. Present-day rainforest nat...
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1973-01-01
This EREP photograph of the Uncompahgre Plateau area of Colorado illustrates the land use classification using the hierarchical numbering system to depict land forms and vegetative patterns. The numerator is a three-digit number with decimal components identifying the vegetation analog or land use conditions. The denominator uses a three-component decimal system for landscape characterization.
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Brian Miranda; Brian R. Sturtevant; Isabelle Schmelzer; Frederik Doyon; Peter Wolter
2016-01-01
Understanding vegetation recovery patterns following wildfire and logging disturbance is essential for long-term planning in sustainable forestry. Plot-scale studies indicate differences in revegetation rates and postdisturbance composition in Labrador, Canada, following fire in comparison with harvest but do not necessarily capture the...
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Vegetation productivity responds to sub-annual climate conditions across semiarid biomes
USDA-ARS?s Scientific Manuscript database
In the Southwestern United States (SW), the current prolonged warm drought is similar to the predicted future climate change scenarios for the region. This study aimed to determine patterns in vegetation response to the early 21st century drought across multiple biomes. We hypothesized that differen...
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Invasive plants in Arizona's forests and woodlands
Alix Rogstad; Tom DeGomez; Carol Hull Sieg
2007-01-01
Climate is critically linked to vegetation dynamics at many different spatial and temporal scales across the desert Southwest. Small-scale, short duration monsoon season thunderstorms can bring much needed precipitation to small patches of vegetation or can initiate widespread flooding. Long-term variations in climate related to ocean circulation patterns can create...
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Amy C. Ganguli; Johathan B. Haufler; Carolyn A. Mehl; Jimmie D. Chew
2011-01-01
Understanding historical ecosystem diversity and wildlife habitat quality can provide a useful reference for managing and restoring rangeland ecosystems. We characterized historical ecosystem diversity using available empirical data, expert opinion, and the spatially explicit vegetation dynamics model SIMPPLLE (SIMulating Vegetative Patterns and Processes at Landscape...
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Zhang, Xinfang; Xu, Shijian; Li, Changming; Zhao, Lin; Feng, Huyuan; Yue, Guangyang; Ren, Zhengwei; Cheng, Guogdong
2014-01-01
In the Tibetan permafrost region, vegetation types and soil properties have been affected by permafrost degradation, but little is known about the corresponding patterns of their soil microbial communities. Thus, we analyzed the effects of vegetation types and their covariant soil properties on bacterial and fungal community structure and membership and bacterial community-level physiological patterns. Pyrosequencing and Biolog EcoPlates were used to analyze 19 permafrost-affected soil samples from four principal vegetation types: swamp meadow (SM), meadow (M), steppe (S) and desert steppe (DS). Proteobacteria, Acidobacteria, Bacteroidetes and Actinobacteria dominated bacterial communities and the main fungal phyla were Ascomycota, Basidiomycota and Mucoromycotina. The ratios of Proteobacteria/Acidobacteria decreased in the order: SM>M>S>DS, whereas the Ascomycota/Basidiomycota ratios increased. The distributions of carbon and nitrogen cycling bacterial genera detected were related to soil properties. The bacterial communities in SM/M soils degraded amines/amino acids very rapidly, while polymers were degraded rapidly by S/DS communities. UniFrac analysis of bacterial communities detected differences among vegetation types. The fungal UniFrac community patterns of SM differed from the others. Redundancy analysis showed that the carbon/nitrogen ratio had the main effect on bacteria community structures and their diversity in alkaline soil, whereas soil moisture was mainly responsible for structuring fungal communities. Thus, microbial communities and their functioning are probably affected by soil environmental change in response to permafrost degradation. Copyright © 2014 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.
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NASA Astrophysics Data System (ADS)
Nudurupati, S. S.; Istanbulluoglu, E.; Adams, J. M.; Hobley, D. E. J.; Gasparini, N. M.; Tucker, G. E.; Hutton, E. W. H.
2014-12-01
Topography plays a commanding role on the organization of ecohydrologic processes and resulting vegetation patterns. In southwestern United States, climate conditions lead to terrain aspect- and elevation-controlled ecosystems, with mesic north-facing and xeric south-facing vegetation types; and changes in biodiversity as a function of elevation from shrublands in low desert elevations, to mixed grass/shrublands in mid elevations, and forests at high elevations and ridge tops. These observed patterns have been attributed to differences in topography-mediated local soil moisture availability, micro-climatology, and life history processes of plants that control chances of plant establishment and survival. While ecohydrologic models represent local vegetation dynamics in sufficient detail up to sub-hourly time scales, plant life history and competition for space and resources has not been adequately represented in models. In this study we develop an ecohydrologic cellular automata model within the Landlab component-based modeling framework. This model couples local vegetation dynamics (biomass production, death) and plant establishment and competition processes for resources and space. This model is used to study the vegetation organization in a semiarid New Mexico catchment where elevation and hillslope aspect play a defining role on plant types. Processes that lead to observed plant types across the landscape are examined by initializing the domain with randomly assigned plant types and systematically changing model parameters that couple plant response with soil moisture dynamics. Climate perturbation experiments are conducted to examine the plant response in space and time. Understanding the inherently transient ecohydrologic systems is critical to improve predictions of climate change impacts on ecosystems.
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Kumar, S.; Simonson, S.E.; Stohlgren, T.J.
2009-01-01
We investigated butterfly responses to plot-level characteristics (plant species richness, vegetation height, and range in NDVI [normalized difference vegetation index]) and spatial heterogeneity in topography and landscape patterns (composition and configuration) at multiple spatial scales. Stratified random sampling was used to collect data on butterfly species richness from seventy-six 20 ?? 50 m plots. The plant species richness and average vegetation height data were collected from 76 modified-Whittaker plots overlaid on 76 butterfly plots. Spatial heterogeneity around sample plots was quantified by measuring topographic variables and landscape metrics at eight spatial extents (radii of 300, 600 to 2,400 m). The number of butterfly species recorded was strongly positively correlated with plant species richness, proportion of shrubland and mean patch size of shrubland. Patterns in butterfly species richness were negatively correlated with other variables including mean patch size, average vegetation height, elevation, and range in NDVI. The best predictive model selected using Akaike's Information Criterion corrected for small sample size (AICc), explained 62% of the variation in butterfly species richness at the 2,100 m spatial extent. Average vegetation height and mean patch size were among the best predictors of butterfly species richness. The models that included plot-level information and topographic variables explained relatively less variation in butterfly species richness, and were improved significantly after including landscape metrics. Our results suggest that spatial heterogeneity greatly influences patterns in butterfly species richness, and that it should be explicitly considered in conservation and management actions. ?? 2008 Springer Science+Business Media B.V.
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Cui, Yue; Walcott, Ronald
2017-01-01
ABSTRACT Vegetable seeds have the potential to disseminate and transmit foodborne bacterial pathogens. This study was undertaken to assess the abilities of selected Salmonella and enterohemorrhagic Escherichia coli (EHEC) strains to attach to fungicide-treated versus untreated, and intact versus mechanically damaged, seeds of alfalfa, fenugreek, lettuce, and tomato. Surface-sanitized seeds (2 g) were exposed to four individual strains of Salmonella or EHEC at 20°C for 5 h. Contaminated seeds were rinsed twice, each with 10 ml of sterilized water, before being soaked overnight in 5 ml of phosphate-buffered saline at 4°C. The seeds were then vortexed vigorously for 1 min, and pathogen populations in seed rinse water and soaking buffer were determined using a standard plate count assay. In general, the Salmonella cells had higher attachment ratios than the EHEC cells. Lettuce seeds by unit weight had the highest numbers of attached Salmonella or EHEC cells, followed by tomato, alfalfa, and fenugreek seeds. In contrast, individual fenugreek seeds had more attached pathogen cells, followed by lettuce, alfalfa, and tomato seeds. Significantly more Salmonella and EHEC cells attached to mechanically damaged seeds than to intact seeds (P < 0.05). Although, on average, significantly more Salmonella and EHEC cells were recovered from untreated than fungicide-treated seeds (P < 0.05), fungicide treatment did not significantly affect the attachment of individual bacterial strains to vegetable seeds (P > 0.05), with a few exceptions. This study fills gaps in the current body of literature and helps explain bacterial interactions with vegetable seeds with differing surface characteristics. IMPORTANCE Vegetable seeds, specifically sprout seeds, have the potential to disseminate and transmit foodborne bacterial pathogens. This study investigated the interaction between two important bacterial pathogens, i.e., Salmonella and EHEC, and vegetable seeds with differing surface characteristics. This research helps understand whether seed surface structure, integrity, and fungicide treatment affect the interaction between bacterial cells and vegetable seeds. PMID:28130295
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Cui, Yue; Walcott, Ronald; Chen, Jinru
2017-04-01
Vegetable seeds have the potential to disseminate and transmit foodborne bacterial pathogens. This study was undertaken to assess the abilities of selected Salmonella and enterohemorrhagic Escherichia coli (EHEC) strains to attach to fungicide-treated versus untreated, and intact versus mechanically damaged, seeds of alfalfa, fenugreek, lettuce, and tomato. Surface-sanitized seeds (2 g) were exposed to four individual strains of Salmonella or EHEC at 20°C for 5 h. Contaminated seeds were rinsed twice, each with 10 ml of sterilized water, before being soaked overnight in 5 ml of phosphate-buffered saline at 4°C. The seeds were then vortexed vigorously for 1 min, and pathogen populations in seed rinse water and soaking buffer were determined using a standard plate count assay. In general, the Salmonella cells had higher attachment ratios than the EHEC cells. Lettuce seeds by unit weight had the highest numbers of attached Salmonella or EHEC cells, followed by tomato, alfalfa, and fenugreek seeds. In contrast, individual fenugreek seeds had more attached pathogen cells, followed by lettuce, alfalfa, and tomato seeds. Significantly more Salmonella and EHEC cells attached to mechanically damaged seeds than to intact seeds ( P < 0.05). Although, on average, significantly more Salmonella and EHEC cells were recovered from untreated than fungicide-treated seeds ( P < 0.05), fungicide treatment did not significantly affect the attachment of individual bacterial strains to vegetable seeds ( P > 0.05), with a few exceptions. This study fills gaps in the current body of literature and helps explain bacterial interactions with vegetable seeds with differing surface characteristics. IMPORTANCE Vegetable seeds, specifically sprout seeds, have the potential to disseminate and transmit foodborne bacterial pathogens. This study investigated the interaction between two important bacterial pathogens, i.e., Salmonella and EHEC, and vegetable seeds with differing surface characteristics. This research helps understand whether seed surface structure, integrity, and fungicide treatment affect the interaction between bacterial cells and vegetable seeds. Copyright © 2017 American Society for Microbiology.
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Nakanishi, Koichi; Kogure, Akinori; Fujii, Takenao; Kokawa, Ryohei; Deuchi, Keiji; Kuwana, Ritsuko; Takamatsu, Hiromu
2013-10-09
If a fixed stress is applied to the three-dimensional z-axis of a solid material, followed by heating, the amount of thermal expansion increases according to a fixed coefficient of thermal expansion. When expansion is plotted against temperature, the transition temperature at which the physical properties of the material change is at the apex of the curve. The composition of a microbial cell depends on the species and condition of the cell; consequently, the rate of thermal expansion and the transition temperature also depend on the species and condition of the cell. We have developed a method for measuring the coefficient of thermal expansion and the transition temperature of cells using a nano thermal analysis system in order to study the physical nature of the cells. The tendency was seen that among vegetative cells, the Gram-negative Escherichia coli and Pseudomonas aeruginosa have higher coefficients of linear expansion and lower transition temperatures than the Gram-positive Staphylococcus aureus and Bacillus subtilis. On the other hand, spores, which have low water content, overall showed lower coefficients of linear expansion and higher transition temperatures than vegetative cells. Comparing these trends to non-microbial materials, vegetative cells showed phenomenon similar to plastics and spores showed behaviour similar to metals with regards to the coefficient of liner thermal expansion. We show that vegetative cells occur phenomenon of similar to plastics and spores to metals with regard to the coefficient of liner thermal expansion. Cells may be characterized by the coefficient of linear expansion as a physical index; the coefficient of linear expansion may also characterize cells structurally since it relates to volumetric changes, surface area changes, the degree of expansion of water contained within the cell, and the intensity of the internal stress on the cellular membrane. The coefficient of linear expansion holds promise as a new index for furthering the understanding of the characteristics of cells. It is likely to be a powerful tool for investigating changes in the rate of expansion and also in understanding the physical properties of cells.
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2013-01-01
Background If a fixed stress is applied to the three-dimensional z-axis of a solid material, followed by heating, the amount of thermal expansion increases according to a fixed coefficient of thermal expansion. When expansion is plotted against temperature, the transition temperature at which the physical properties of the material change is at the apex of the curve. The composition of a microbial cell depends on the species and condition of the cell; consequently, the rate of thermal expansion and the transition temperature also depend on the species and condition of the cell. We have developed a method for measuring the coefficient of thermal expansion and the transition temperature of cells using a nano thermal analysis system in order to study the physical nature of the cells. Results The tendency was seen that among vegetative cells, the Gram-negative Escherichia coli and Pseudomonas aeruginosa have higher coefficients of linear expansion and lower transition temperatures than the Gram-positive Staphylococcus aureus and Bacillus subtilis. On the other hand, spores, which have low water content, overall showed lower coefficients of linear expansion and higher transition temperatures than vegetative cells. Comparing these trends to non-microbial materials, vegetative cells showed phenomenon similar to plastics and spores showed behaviour similar to metals with regards to the coefficient of liner thermal expansion. Conclusions We show that vegetative cells occur phenomenon of similar to plastics and spores to metals with regard to the coefficient of liner thermal expansion. Cells may be characterized by the coefficient of linear expansion as a physical index; the coefficient of linear expansion may also characterize cells structurally since it relates to volumetric changes, surface area changes, the degree of expansion of water contained within the cell, and the intensity of the internal stress on the cellular membrane. The coefficient of linear expansion holds promise as a new index for furthering the understanding of the characteristics of cells. It is likely to be a powerful tool for investigating changes in the rate of expansion and also in understanding the physical properties of cells. PMID:24107328
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NASA Technical Reports Server (NTRS)
Jacobberger, P. A.; Hooper, D. M.
1991-01-01
Seasonal reflectance variations in semigrid environments provide a means of assessing vegetation health and density as well as monitoring landform processes. Multitemporal Landsat Thematic Mapper scenes with field measurements are used to map geomorphology and vegetation density in a stabilized dune environment and to measure seasonal reflectance changes for a series of ten geomorphological and vegetation units on the Kalahari-age linear dunes. Units were chosen based on differences in landform and proportion of trees, forbs and bare soil. Reflectance curves and normalized-difference vegetation indices (NDVI) show that dune crests have the strongest seasonal variability in color and brightness. The geomorphological link with reflectance and NDVI values are linked to biomass production and zoning of vegetation with slope, drainage and subtle soil differences.
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Montane ecosystem productivity responds more to global circulation patterns than climatic trends.
Desai, A R; Wohlfahrt, G; Zeeman, M J; Katata, G; Eugster, W; Montagnani, L; Gianelle, D; Mauder, M; Schmid, H-P
2016-02-01
Regional ecosystem productivity is highly sensitive to inter-annual climate variability, both within and outside the primary carbon uptake period. However, Earth system models lack sufficient spatial scales and ecosystem processes to resolve how these processes may change in a warming climate. Here, we show, how for the European Alps, mid-latitude Atlantic ocean winter circulation anomalies drive high-altitude summer forest and grassland productivity, through feedbacks among orographic wind circulation patterns, snowfall, winter and spring temperatures, and vegetation activity. Therefore, to understand future global climate change influence to regional ecosystem productivity, Earth systems models need to focus on improvements towards topographic downscaling of changes in regional atmospheric circulation patterns and to lagged responses in vegetation dynamics to non-growing season climate anomalies.
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Montane ecosystem productivity responds more to global circulation patterns than climatic trends
NASA Astrophysics Data System (ADS)
Desai, A. R.; Wohlfahrt, G.; Zeeman, M. J.; Katata, G.; Eugster, W.; Montagnani, L.; Gianelle, D.; Mauder, M.; Schmid, H.-P.
2016-02-01
Regional ecosystem productivity is highly sensitive to inter-annual climate variability, both within and outside the primary carbon uptake period. However, Earth system models lack sufficient spatial scales and ecosystem processes to resolve how these processes may change in a warming climate. Here, we show, how for the European Alps, mid-latitude Atlantic ocean winter circulation anomalies drive high-altitude summer forest and grassland productivity, through feedbacks among orographic wind circulation patterns, snowfall, winter and spring temperatures, and vegetation activity. Therefore, to understand future global climate change influence to regional ecosystem productivity, Earth systems models need to focus on improvements towards topographic downscaling of changes in regional atmospheric circulation patterns and to lagged responses in vegetation dynamics to non-growing season climate anomalies.
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Using Landscape metrics to analyze the landscape evolution under land abandonment
NASA Astrophysics Data System (ADS)
Pelorosso, Raffaele; Della Chiesa, Stefano; Gobattoni, Federica; Leone, Antonio
2010-05-01
The human actions and the human-linked land use changes are the main responsible of the present landscapes and vegetation patterns (Antrop, 2005; Pelorosso et al., 2009). Hence, revised concept of potential natural vegetation has been developed in landscape ecology. In fact, it cannot more be considered as the optimum for a certain landscape, but only as a general indication never widely reached. In particular Ingegnoli and Pignatti (2007) introduced the concept of fittest vegetation as "the most suitable or suited vegetation for the specific climate and geomorphic conditions, in a limited period of time and in a certain defined place with a particular range of incorporable disturbances (including man's) under natural or not natural conditions". Anthropic exploitation of land and its resources to obtain goods and services (Willemen et al, 2008) can be considered therefore the main cause of landscape change as an integrant part of nature, not external. The abandon of the land by farmers or other users it is one of the more felt problems for the marginal territories of Mediterranean basin. It is therefore caused by socio-economic changes of last decades and cause several impact on biodiversity (Geri et al. 2010) and hydro-geological assessment. A mountain landscape has however the capacity to provide goods like timber and services like aesthetic pleasure or regulation of water system. The necessity of a conservation strategy and the development of sustainable socio-economic management plan play a very important role in governing land and quality of life for people and ecosystems also for marginal territory. After a land abandonment, soil conditions and several climatic and orographic characteristic plus human disturbance affect the length of time required by secondary succession, throwing the establishment of vegetation with different association, structure and composition until a (stable or meta-stable) equilibrium is reached (Ingegnoli and Pignatti, 2007). In this view, therefore, not all the abandoned land will be covered by woods also after a reasonable time (e.g 20-30 years); open areas patches can resist over time as a consequence of different (more o less natural) disturbances, pointing out a landscape mosaic and vegetation pattern almost never completely homogeneous. This spatial and temporal differentiation of landscape pattern, therefore, require both the individuation of disturbances and their effect on land abandonment process to be analyzed for each different landscape. Many types of analysis and models were developed and used to understand the reason of abandonment, its evolution, likelihood future landscape scenarios and the leading consequences on environment and population in order to establish right land-uses to obtain suitable and sustainable goods and services from landscape itself. One of these analysis recurs to landscape metrics. Landscape metrics have been widely applied in ecology and landscape ecology (Rainis, 2003; Romero-Calcerrada and Perry, 2004 ; Narumalani et al., 2004; Rocchini et al., 2006) because they allow an objective description of the temporal pattern of landscape change and a comparison with other landscapes (Turner et al., 2001). Furthermore, a description of the shape, size and spatial arrangement of patches of vegetation can be used to link the observed pattern with the ecological processes that may have generated it (Rocchini et al., 2006). So these metrics can be used to see how an abandoned landscape can evolve under the effects of different constrictions that, also if not completely knew, have been affecting the present assessment. Through historical and recent aerial photos (1954-1985-1999) and several landscape metrics, the evolution of marginal municipality of central Apennine under abandonment is presented here. Temporal evolution of landscape metrics was discussed to underline the importance of such descriptors of vegetation pattern dynamics and the key role played by these useful tools for the evaluation of reachable future vegetation pattern equilibriums.
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Environmental factors explaining the vegetation patterns in a temperate peatland.
Pellerin, Stéphanie; Lagneau, Louis-Adrien; Lavoie, Martin; Larocque, Marie
2009-08-01
Although ombrotrophic temperate peatlands are important ecosystems for maintaining biodiversity in eastern North America, the environmental factors influencing their flora are only partly understood. The relationships between plant species distribution and environmental factors were thus studied within the oldest temperate peatland of Québec. Plant assemblages were identified by cluster analysis while CCA was used to related vegetation gradients to environmental factors. Five assemblages were identified; three typical of open bog and two characterized by more minerotrophic vegetation. Thicker peat deposit was encounter underlying the bog assemblages while higher water table level and percentage of free surface water distinguished the minerotrophic assemblages. Overall, the floristic patterns observed were spatially structured along the margins and the expanse. The most important environmental factors explaining this spatial gradient were the percentage of free surface water and the highest water-table level.
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NASA Astrophysics Data System (ADS)
Hupp, C. R.; Rinaldi, M.
2010-12-01
Many, if not most, streams have been mildly to severely affected by human disturbance, which complicates efforts to understand riparian ecosystems. Mediterranean regions have a long history of human influences including: dams, stream channelization, mining of sediment, and levee /canal construction. Typically these alterations reduce the ecosystem services that functioning floodplains provide and may negatively impact the natural ecology of floodplains through reductions in suitable habitats, biodiversity, and nutrient cycling. Additionally, human alterations typically shift affected streams away from a state of natural dynamic equilibrium, where net sediment deposition is approximately in balance with net erosion. Lack of equilibrium typically affects the degree to which floodplain ecosystems are connected to streamflow regime. Low connectivity, usually from human- or climate-induced incision, may result in reduced flow on floodplains and lowered water tables. High connectivity may result in severe sediment deposition. Connectivity has a direct impact on vegetation communities. Riparian vegetation distribution patterns and diversity relative to various fluvial geomorphic channel patterns, landforms, and processes are described and interpreted for selected rivers of Tuscany, Central Italy; with emphasis on channel evolution following human impacts. Multivariate analysis reveals distinct quantitative vegetation patterns related to six fluvial geomorphic surfaces. Analysis of vegetation data also shows distinct associations of plants with adjustment processes related to the stage of channel evolution. Plant distribution patterns coincide with disturbance/landform/soil moisture gradients. Species richness increases from channel bed to terrace and on heterogeneous riparian areas, while species richness decreases from moderate to intense incision and from low to intense narrowing. As a feedback mechanism, woody vegetation in particular may facilitate geomorphic recovery of floodplains by affecting sedimentation dynamics. Identification and understanding of critical fluvial parameters related to floodplain connectivity (e.g. stream gradient, grain-size, and hydrography) and spatial and temporal sediment deposition/erosion process trajectories should facilitate management efforts to retain and/or regain important ecosystem services.
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Hu, Ziye; Meng, Han; Shi, Jin-Huan; Bu, Nai-Shun; Fang, Chang-Ming; Quan, Zhe-Xue
2014-01-01
Global nitrogen cycling is mainly mediated by the activity of microorganisms. Nitrogen cycle processes are mediated by functional groups of microorganisms that are affected by constantly changing environmental conditions and substrate availability. In this study, we investigated the temporal and spatial patterns of nitrifier and denitrifier communities in an intertidal wetland. Soil samples were collected over four distinct seasons from three locations with different vegetative cover. Multiple environmental factors and process rates were measured and analyzed together with the community size and composition profiles. We observed that the community size and composition of the nitrifiers and denitrifiers are affected significantly by seasonal factors, while vegetative cover affected the community composition. The seasonal impacts on the community size of ammonia oxidizing archaea (AOA) are much higher than that of ammonia oxidizing bacteria (AOB). The seasonal change was a more important indicator for AOA community composition patterns, while vegetation was more important for the AOB community patterns. The microbial process rates were correlated with both the community size and composition. PMID:25101072
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Do ecohydrology and community dynamics feed back to banded-ecosystem structure and productivity?
NASA Astrophysics Data System (ADS)
Callegaro, Chiara; Ursino, Nadia
2016-04-01
Mixed communities including grass, shrubs and trees are often reported to populate self-organized vegetation patterns. Patterns of survey data suggest that species diversity and complementarity strengthen the dynamics of banded environments. Resource scarcity and local facilitation trigger self organization, whereas coexistence of multiple species in vegetated self-organizing patches, implying competition for water and nutrients and favorable reproduction sites, is made possible by differing adaptation strategies. Mixed community spatial self-organization has so far received relatively little attention, compared with local net facilitation of isolated species. We assumed that soil moisture availability is a proxy for the environmental niche of plant species according to Ursino and Callegaro (2016). Our modelling effort was focused on niche differentiation of coexisting species within a tiger bush type ecosystem. By minimal numerical modelling and stability analysis we try to answer a few open scientific questions: Is there an adaptation strategy that increases biodiversity and ecosystem functioning? Does specific adaptation to environmental niches influence the structure of self-organizing vegetation pattern? What specific niche distribution along the environmental gradient gives the highest global productivity?
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Hypothalamic integration of body fluid regulation.
Denton, D A; McKinley, M J; Weisinger, R S
1996-01-01
The progression of animal life from the paleozoic ocean to rivers and diverse econiches on the planet's surface, as well as the subsequent reinvasion of the ocean, involved many different stresses on ionic pattern, osmotic pressure, and volume of the extracellular fluid bathing body cells. The relatively constant ionic pattern of vertebrates reflects a genetic "set" of many regulatory mechanisms--particularly renal regulation. Renal regulation of ionic pattern when loss of fluid from the body is disproportionate relative to the extracellular fluid composition (e.g., gastric juice with vomiting and pancreatic secretion with diarrhea) makes manifest that a mechanism to produce a biologically relatively inactive extracellular anion HCO3- exists, whereas no comparable mechanism to produce a biologically inactive cation has evolved. Life in the ocean, which has three times the sodium concentration of extracellular fluid, involves quite different osmoregulatory stress to that in freshwater. Terrestrial life involves risk of desiccation and, in large areas of the planet, salt deficiency. Mechanisms integrated in the hypothalamus (the evolutionary ancient midbrain) control water retention and facilitate excretion of sodium, and also control the secretion of renin by the kidney. Over and above the multifactorial processes of excretion, hypothalamic sensors reacting to sodium concentration, as well as circumventricular organs sensors reacting to osmotic pressure and angiotensin II, subserve genesis of sodium hunger and thirst. These behaviors spectacularly augment the adaptive capacities of animals. Instinct (genotypic memory) and learning (phenotypic memory) are melded to give specific behavior apt to the metabolic status of the animal. The sensations, compelling emotions, and intentions generated by these vegetative systems focus the issue of the phylogenetic emergence of consciousness and whether primal awareness initially came from the interoreceptors and vegetative systems rather than the distance receptors. Images Fig. 1 Fig. 2 Fig. 3 PMID:8693005
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Dietary patterns and risk of death and progression to ESRD in individuals with CKD: a cohort study.
Gutiérrez, Orlando M; Muntner, Paul; Rizk, Dana V; McClellan, William M; Warnock, David G; Newby, P K; Judd, Suzanne E
2014-08-01
Nutrition is linked strongly with health outcomes in chronic kidney disease (CKD). However, few studies have examined relationships between dietary patterns and health outcomes in persons with CKD. Observational cohort study. 3,972 participants with CKD (defined as estimated glomerular filtration rate < 60 mL/min/1.73 m2 or albumin-creatinine ratio ≥ 30 mg/g at baseline) from the Reasons for Geographic and Racial Differences in Stroke (REGARDS) Study, a prospective cohort study of 30,239 black and white adults at least 45 years of age. 5 empirically derived dietary patterns identified by factor analysis: "convenience" (Chinese and Mexican foods, pizza, and other mixed dishes), "plant-based" (fruits and vegetables), "sweets/fats" (sugary foods), "Southern" (fried foods, organ meats, and sweetened beverages), and "alcohol/salads" (alcohol, green-leafy vegetables, and salad dressing). All-cause mortality and end-stage renal disease (ESRD). 816 deaths and 141 ESRD events were observed over approximately 6 years of follow-up. There were no statistically significant associations of convenience, sweets/fats, or alcohol/salads pattern scores with all-cause mortality after multivariable adjustment. In Cox regression models adjusted for sociodemographic factors, energy intake, comorbid conditions, and baseline kidney function, higher plant-based pattern scores (indicating greater consistency with the pattern) were associated with lower risk of mortality (HR comparing fourth to first quartile, 0.77; 95% CI, 0.61-0.97), whereas higher Southern pattern scores were associated with greater risk of mortality (HR comparing fourth to first quartile, 1.51; 95% CI, 1.19-1.92). There were no associations of dietary patterns with incident ESRD in multivariable-adjusted models. Missing dietary pattern data, potential residual confounding from lifestyle factors. A Southern dietary pattern rich in processed and fried foods was associated independently with mortality in persons with CKD. In contrast, a diet rich in fruits and vegetables appeared to be protective. Copyright © 2014 National Kidney Foundation, Inc. Published by Elsevier Inc. All rights reserved.
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Barroso, Monica; Beth, Sytske A; Voortman, Trudy; Jaddoe, Vincent W V; van Zelm, Menno C; Moll, Henriette A; Kiefte-de Jong, Jessica C
2018-06-01
There have been many studies of associations between infant feeding practices and development of celiac disease during childhood, but few studies have focused on overall diets of young children after the weaning period. We aimed to examine the association between common dietary patterns in infants and the occurrence of celiac disease autoimmunity during childhood. We performed a prospective analysis of data from the Generation R Study that comprised 1997 children born from April 2002 through January 2006 in Rotterdam, the Netherlands. Food consumption around 1 year of age was assessed with a validated food-frequency questionnaire. Dietary data were examined using a priori (based on existing guidelines) and a posteriori (principal component analysis and reduced rank regression) dietary pattern analyses. Five dietary patterns were compared. Celiac disease autoimmunity, determined on the basis of serum concentration of transglutaminase-2 autoantibody (ie, TG2A) below or above 7 U/mL, was evaluated at 6 years. Associations between dietary pattern adherence scores and celiac disease autoimmunity were examined using multivariable logistic regression models. Higher adherence to the a posteriori-derived prudent dietary pattern (high intake of vegetables, vegetable oils, pasta, and grains and low consumption of refined cereals and sweet beverages) at 1 year was significantly associated with lower odds of celiac disease autoimmunity at 6 years (odds ratio, 0.67; 95% confidence interval, 0.53-0.84). No significant associations were found for the 4 remaining dietary patterns. In a prospective study of dietary patterns of young children in the Netherlands, we associated a dietary pattern characterized by high consumption of vegetables and grains and low consumption of refined cereals and sweet beverages, with lower odds of celiac disease autoimmunity. Early-life dietary patterns might therefore be involved in the development of celiac disease during childhood. Copyright © 2018 AGA Institute. Published by Elsevier Inc. All rights reserved.
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Dietary patterns and household food insecurity in rural populations of Kilosa district, Tanzania.
Ntwenya, Julius Edward; Kinabo, Joyce; Msuya, John; Mamiro, Peter; Majili, Zahara Saidi
2015-01-01
Few studies have investigated the relationship between dietary pattern and household food insecurity. The objective of the present analysis was to describe the food consumption patterns and to relate these with the prevalence of food insecurity in the context of a rural community. Three hundred and seven (307) randomly selected households in Kilosa district participated in the study. Data were collected during the rainy season (February-May) and post harvest season (September-October) in the year 2011. Food consumption pattern was determined using a 24-h dietary recall method. Food insecurity data were based on the 30 day recall experience to food insecurity in the household. Factor analysis method using Principal Components extraction function was used to derive the dietary patterns and correlation analysis was used to establish the existing relationship between household food insecurity and dietary patterns factor score. Four food consumption patterns namely (I) Meat and milk; (II) Pulses, legumes, nuts and cooking oils; (III) fish (and other sea foods), roots and tubers; (IV) Cereals, vegetables and fruits consumption patterns were identified during harvest season. Dietary patterns identified during the rainy season were as follows: (I) Fruits, cooking oils, fats, roots and tubers (II) Eggs, meat, milk and milk products (III) Fish, other sea foods, vegetables, roots and tubers and (IV) Pulses, legumes, nuts, cereals and vegetables. Household food insecurity was 80% and 69% during rainy and harvest-seasons, respectively (P = 0.01). Household food insecurity access scale score was negatively correlated with the factor scores on household dietary diversity. Food consumption patterns and food insecurity varied by seasons with worst scenarios most prevalent during the rainy season. The risk for inadequate dietary diversity was higher among food insecure households compared to food secure households. Effort geared at alleviating household food insecurity could contribute to consumption of a wide range of food items at the household level.
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Nettleton, Jennifer A; Steffen, Lyn M; Mayer-Davis, Elizabeth J; Jenny, Nancy S; Jiang, Rui; Herrington, David M; Jacobs, David R
2010-01-01
Background Dietary patterns may influence cardiovascular disease risk through effects on inflammation and endothelial activation. Objective We examined relations between dietary patterns and markers of inflammation and endothelial activation. Design At baseline, diet (food-frequency questionnaire) and concentrations of C-reactive protein (CRP), interleukin 6 (IL-6), homocysteine, soluble intercellular adhesion molecule-1 (sICAM-1), and soluble E selectin were assessed in 5089 nondiabetic participants in the Multi-Ethnic Study of Atherosclerosis. Results Four dietary patterns were derived by using factor analysis. The fats and processed meats pattern (fats, oils, processed meats, fried potatoes, salty snacks, and desserts) was positively associated with CRP (P for trend < 0.001), IL-6 (P for trend < 0.001), and homocysteine (P for trend = 0.002). The beans, tomatoes, and refined grains pattern (beans, tomatoes, refined grains, and high-fat dairy products) was positively related to sICAM-1 (P for trend = 0.007). In contrast, the whole grains and fruit pattern (whole grains, fruit, nuts, and green leafy vegetables) was inversely associated with CRP, IL-6, homocysteine (P for trend ≤ 0.001), and sICAM-1 (P for trend = 0.034), and the vegetables and fish pattern (fish and dark-yellow, cruciferous, and other vegetables) was inversely related to IL-6 (P for trend = 0.009). CRP, IL-6, and homocysteine relations across the fats and processed meats and whole grains and fruit patterns were independent of demographics and lifestyle factors and were not modified by race-ethnicity. CRP and homocysteine relations were independent of waist circumference. Conclusions These results corroborate previous findings that empirically derived dietary patterns are associated with inflammation and show that these relations in an ethnically diverse population with unique dietary habits are similar to findings in more homogeneous populations. PMID:16762949
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Dye, Dennis G.; Middleton, Barry R.; Vogel, John M.; Wu, Zhuoting; Velasco, Miguel G.
2016-01-01
We developed and evaluated a methodology for subpixel discrimination and large-area mapping of the perennial warm-season (C4) grass component of vegetation cover in mixed-composition landscapes of the southwestern United States and northern Mexico. We describe the methodology within a general, conceptual framework that we identify as the differential vegetation phenology (DVP) paradigm. We introduce a DVP index, the Normalized Difference Phenometric Index (NDPI) that provides vegetation type-specific information at the subpixel scale by exploiting differential patterns of vegetation phenology detectable in time-series spectral vegetation index (VI) data from multispectral land imagers. We used modified soil-adjusted vegetation index (MSAVI2) data from Landsat to develop the NDPI, and MSAVI2 data from MODIS to compare its performance relative to one alternate DVP metric (difference of spring average MSAVI2 and summer maximum MSAVI2), and two simple, conventional VI metrics (summer average MSAVI2, summer maximum MSAVI2). The NDPI in a scaled form (NDPIs) performed best in predicting variation in perennial C4 grass cover as estimated from landscape photographs at 92 sites (R2 = 0.76, p < 0.001), indicating improvement over the alternate DVP metric (R2 = 0.73, p < 0.001) and substantial improvement over the two conventional VI metrics (R2 = 0.62 and 0.56, p < 0.001). The results suggest DVP-based methods, and the NDPI in particular, can be effective for subpixel discrimination and mapping of exposed perennial C4 grass cover within mixed-composition landscapes of the Southwest, and potentially for monitoring of its response to drought, climate change, grazing and other factors, including land management. With appropriate adjustments, the method could potentially be used for subpixel discrimination and mapping of grass or other vegetation types in other regions where the vegetation components of the landscape exhibit contrasting seasonal patterns of phenology.
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NASA Astrophysics Data System (ADS)
A, Geruo; Velicogna, Isabella; Kimball, John S.; Du, Jinyang; Kim, Youngwook; Colliander, Andreas; Njoku, Eni
2017-05-01
We combine soil moisture (SM) data from AMSR-E and AMSR-2, and changes in terrestrial water storage (TWS) from time-variable gravity data from GRACE to delineate and characterize the evolution of drought and its impact on vegetation growth. GRACE-derived TWS provides spatially continuous observations of changes in overall water supply and regional drought extent, persistence and severity, while satellite-derived SM provides enhanced delineation of shallow-depth soil water supply. Together these data provide complementary metrics quantifying available plant water supply. We use these data to investigate the supply changes from water components at different depths in relation to satellite-based enhanced vegetation index (EVI) and gross primary productivity (GPP) from MODIS and solar-induced fluorescence (SIF) from GOME-2, during and following major drought events observed in the state of Texas, USA and its surrounding semiarid area for the past decade. We find that in normal years the spatial pattern of the vegetation-moisture relationship follows the gradient in mean annual precipitation. However since the 2011 hydrological drought, vegetation growth shows enhanced sensitivity to surface SM variations in the grassland area located in central Texas, implying that the grassland, although susceptible to drought, has the capacity for a speedy recovery. Vegetation dependency on TWS weakens in the shrub-dominated west and strengthens in the grassland and forest area spanning from central to eastern Texas, consistent with changes in water supply pattern. We find that in normal years GRACE TWS shows strong coupling and similar characteristic time scale to surface SM, while in drier years GRACE TWS manifests stronger persistence, implying longer recovery time and prolonged water supply constraint on vegetation growth. The synergistic combination of GRACE TWS and surface SM, along with remote-sensing vegetation observations provides new insights into drought impact on vegetation-moisture relationship, and unique information regarding vegetation resilience and the recovery of hydrological drought.
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Community food pattern and nutrition among toddlers in district of Pacitan, East Java, Indonesia
NASA Astrophysics Data System (ADS)
Lestari, A.; Hanim, D.; Listyaningsih, E.; Supriyadi
2017-04-01
Aim of this study was to asses and formulate food consumption patterns among under five children in accordance with the desirable dietary pattern score and Recommended Dietary Allowances to the target of East Java’s desirable dietary pattern. Toddlers who have nutritional status less than normal are 29.44%. Toddlers with good nutritional status are 59.39% and obesity toddlers are 11.16 %. Families of respondents were able to provide the food of the crop and compound (p = 0.81; r = 0.11). The ability of the respondent’s family to buy vegetables with p = 0.06; r = 0.19. Animal side dish food spending patterns showed that the family of respondents who consume meat poultry, including eggs was 92.1%. Families fruits spending patterns of respondents was 70.8% had a habit of eating fresh fruit so that every day can be provided. The pattern of food consumption in Pacitan already reflected the pattern of nutritionally balanced food, especially in the fulfillment of carbohydrates, vegetable-sourced protein, animal-sourced protein. Nutritional status of toddlers was ideal. The main driving factor for the improvement of nutritional status of toddlers was nutrition awareness against food diversification.
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Griffith, J.A.; Martinko, E.A.; Whistler, J.L.; Price, K.P.
2002-01-01
We explored relationships of water quality parameters with landscape pattern metrics (LPMs), land use-land cover (LULC) proportions, and the advanced very high resolution radiometer (AVHRR) normalized difference vegetation index (NDVI) or NDVI-derived metrics. Stream sites (271) in Nebraska, Kansas, and Missouri were sampled for water quality parameters, the index of biotic integrity, and a habitat index in either 1994 or 1995. Although a combination of LPMs (interspersion and juxtaposition index, patch density, and percent forest) within Ozark Highlands watersheds explained >60% of the variation in levels of nitrite-nitrate nitrogen and conductivity, in most cases the LPMs were not significantly correlated with the stream data. Several problems using landscape pattern metrics were noted: small watersheds having only one or two patches, collinearity with LULC data, and counterintuitive or inconsistent results that resulted from basic differences in land use-land cover patterns among ecoregions or from other factors determining water quality. The amount of variation explained in water quality parameters using multiple regression models that combined LULC and LPMs was generally lower than that from NDVI or vegetation phenology metrics derived from time-series NDVI data. A comparison of LPMs and NDVI indicated that NDVI had greater promise for monitoring landscapes for stream conditions within the study area.
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Techniques for spatio-temporal analysis of vegetation fires in the topical belt of Africa
DOE Office of Scientific and Technical Information (OSTI.GOV)
Brivio, P.A.; Ober, G.; Koffi, B.
1995-12-31
Biomass burning of forests and savannas is a phenomenon of continental or even global proportions, capable of causing large scale environmental changes. Satellite space observations, in particular from NOAA-AVHRR GAC data, are the only source of information allowing one to document burning patterns at regional and continental scale and over long periods of time. This paper presents some techniques, such as clustering and rose-diagram, useful in the spatial-temporal analysis of satellite derived fires maps to characterize the evolution of spatial patterns of vegetation fires at regional scale. An automatic clustering approach is presented which enables one to describe and parameterizemore » spatial distribution of fire patterns at different scales. The problem of geographical distribution of vegetation fires with respect to some location of interest, point or line, is also considered and presented. In particular rose-diagrams are used to relate fires patterns to some reference point, as experimental sites of tropospheric chemistry measurements. Different temporal data-sets in the tropical belt of Africa, covering both Northern and Southern Hemisphere dry seasons, using these techniques were analyzed and showed very promising results when compared with data from rain chemistry studies at different sampling sites in the equatorial forest.« less
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Griffith, Jerry A; Martinko, Edward A; Whistler, Jerry L; Price, Kevin P
2002-01-01
We explored relationships of water quality parameters with landscape pattern metrics (LPMs), land use-land cover (LULC) proportions, and the advanced very high resolution radiometer (AVHRR) normalized difference vegetation index (NDVI) or NDVI-derived metrics. Stream sites (271) in Nebraska, Kansas, and Missouri were sampled for water quality parameters, the index of biotic integrity, and a habitat index in either 1994 or 1995. Although a combination of LPMs (interspersion and juxtaposition index, patch density, and percent forest) within Ozark Highlands watersheds explained >60% of the variation in levels of nitrite-nitrate nitrogen and conductivity, in most cases the LPMs were not significantly correlated with the stream data. Several problems using landscape pattern metrics were noted: small watersheds having only one or two patches, collinearity with LULC data, and counterintuitive or inconsistent results that resulted from basic differences in land use-land cover patterns among ecoregions or from other factors determining water quality. The amount of variation explained in water quality parameters using multiple regression models that combined LULC and LPMs was generally lower than that from NDVI or vegetation phenology metrics derived from time-series NDVI data. A comparison of LPMs and NDVI indicated that NDVI had greater promise for monitoring landscapes for stream conditions within the study area.
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Beaver assisted river valley formation
Westbrook, Cherie J.; Cooper, D.J.; Baker, B.W.
2011-01-01
We examined how beaver dams affect key ecosystem processes, including pattern and process of sediment deposition, the composition and spatial pattern of vegetation, and nutrient loading and processing. We provide new evidence for the formation of heterogeneous beaver meadows on riverine system floodplains and terraces where dynamic flows are capable of breaching in-channel beaver dams. Our data show a 1.7-m high beaver dam triggered overbank flooding that drowned vegetation in areas deeply flooded, deposited nutrient-rich sediment in a spatially heterogeneous pattern on the floodplain and terrace, and scoured soils in other areas. The site quickly de-watered following the dam breach by high stream flows, protecting the deposited sediment from future re-mobilization by overbank floods. Bare sediment either exposed by scouring or deposited by the beaver flood was quickly colonized by a spatially heterogeneous plant community, forming a beaver meadow. Many willow and some aspen seedlings established in the more heavily disturbed areas, suggesting the site may succeed to a willow carr plant community suitable for future beaver re-occupation. We expand existing theory beyond the beaver pond to include terraces within valleys. This more fully explains how beavers can help drive the formation of alluvial valleys and their complex vegetation patterns as was first postulated by Ruedemann and Schoonmaker in 1938. ?? 2010 John Wiley & Sons, Ltd.
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Response of animal and vegetative cells to the effect of a typical magnetic storm
NASA Astrophysics Data System (ADS)
Talikina, M. G.; Izyumov, Yu. G.; Krylov, V. V.
2013-12-01
Experimentally reproduced fluctuations of a low-frequency magnetic field in a nanotesla range (magnetic storm) affect the mitosis of animals and vegetative cells. Action of this factor during twenty four hours leads to a significant increase in the proliferative activity of embryo cells in roach ( Rutilus rutilus L.) and meristem cells of onion rootlets ( Allium cepa). The clastogenic effect statistically confirmed only in the Allium test seems to reflect the species specificity of the response and higher sensitivity of the cell association of the onion meristem to magnetic storm.
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NASA Astrophysics Data System (ADS)
Prescott, C. L.; Dolan, A. M.; Haywood, A. M.; Hunter, S. J.; Tindall, J. C.
2018-02-01
Regional climate and environmental variability in response to orbital forcing during interglacial events within the mid-Piacenzian (Pliocene) Warm Period (mPWP; 3.264-3.025 Ma) has been rarely studied using climate and vegetation models. Here we use climate and vegetation model simulations to predict changes in regional vegetation patterns in response to orbital forcing for four different interglacial events within the mPWP (Marine Isotope Stages (MIS) G17, K1, KM3 and KM5c). The efficacy of model-predicted changes in regional vegetation is assessed by reference to selected high temporal resolution palaeobotanical studies that are theoretically capable of discerning vegetation patterns for the selected interglacial stages. Annual mean surface air temperatures for the studied interglacials are between 0.4 °C to 0.7 °C higher than a comparable Pliocene experiment using modern orbital parameters. Increased spring/summer and reduced autumn/winter insolation in the Northern Hemisphere during MIS G17, K1 and KM3 enhances seasonality in surface air temperature. The two most robust and notable regional responses to this in vegetation cover occur in North America and continental Eurasia, where forests are replaced by more open-types of vegetation (grasslands and shrubland). In these regions our model results appear to be inconsistent with local palaeobotanical data. The orbitally driven changes in seasonal temperature and precipitation lead to a 30% annual reduction in available deep soil moisture (2.0 m from surface), a critical parameter for forest growth, and subsequent reduction in the geographical coverage of forest-type vegetation; a phenomenon not seen in comparable simulations of Pliocene climate and vegetation run with a modern orbital configuration. Our results demonstrate the importance of examining model performance under a range of realistic orbital forcing scenarios within any defined time interval (e.g. mPWP). Additional orbitally resolved records of regional vegetation are needed to further examine the validity of model-predicted regional climate and vegetation responses in greater detail.
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Stress-driven buckling patterns in spheroidal core/shell structures.
Yin, Jie; Cao, Zexian; Li, Chaorong; Sheinman, Izhak; Chen, Xi
2008-12-09
Many natural fruits and vegetables adopt an approximately spheroidal shape and are characterized by their distinct undulating topologies. We demonstrate that various global pattern features can be reproduced by anisotropic stress-driven buckles on spheroidal core/shell systems, which implies that the relevant mechanical forces might provide a template underpinning the topological conformation in some fruits and plants. Three dimensionless parameters, the ratio of effective size/thickness, the ratio of equatorial/polar radii, and the ratio of core/shell moduli, primarily govern the initiation and formation of the patterns. A distinct morphological feature occurs only when these parameters fall within certain ranges: In a prolate spheroid, reticular buckles take over longitudinal ridged patterns when one or more parameters become large. Our results demonstrate that some universal features of fruit/vegetable patterns (e.g., those observed in Korean melons, silk gourds, ribbed pumpkins, striped cavern tomatoes, and cantaloupes, etc.) may be related to the spontaneous buckling from mechanical perspectives, although the more complex biological or biochemical processes are involved at deep levels.
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Numerical approaches to model perturbation fire in turing pattern formations
NASA Astrophysics Data System (ADS)
Campagna, R.; Brancaccio, M.; Cuomo, S.; Mazzoleni, S.; Russo, L.; Siettos, K.; Giannino, F.
2017-11-01
Turing patterns were observed in chemical, physical and biological systems described by coupled reaction-diffusion equations. Several models have been formulated proposing the water as the causal mechanism of vegetation pattern formation, but this isn't an exhaustive hypothesis in some natural environments. An alternative explanation has been related to the plant-soil negative feedback. In Marasco et al. [1] the authors explored the hypothesis that both mechanisms contribute in the formation of regular and irregular vegetation patterns. The mathematical model consists in three partial differential equations (PDEs) that take into account for a dynamic balance between biomass, water and toxic compounds. A numerical approach is mandatory also to investigate on the predictions of this kind of models. In this paper we start from the mathematical model described in [1], set the model parameters such that the biomass reaches a stable spatial pattern (spots) and present preliminary studies about the occurrence of perturbing events, such as wildfire, that can affect the regularity of the biomass configuration.
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NASA Astrophysics Data System (ADS)
Sitzia, T.; Picco, L.; Ravazzolo, D.; Comiti, F.; Mao, L.; Lenzi, M. A.
2016-07-01
We compared three gravel-bed rivers in north-eastern Italy (Brenta, Piave, Tagliamento) having similar bioclimate, geology and fluvial morphology, but affected by different intensities of anthropogenic disturbance related particularly to hydropower dams, training works and instream gravel mining. Our aim was to test whether a corresponding difference in the interactions between vegetation and geomorphological patterns existed among the three rivers. In equally spaced and sized plots (n = 710) we collected descriptors of geomorphic conditions, and presence-absence of woody species. In the less disturbed river (Tagliamento), spatial succession of woody communities from the floodplain to the channel followed a profile where higher elevation floodplains featured more developed tree communities, and lower elevation islands and bars were covered by pioneer communities. In the intermediate-disturbed river (Piave), islands and floodplains lay at similar elevation and both showed species indicators of mature developed communities. In the most disturbed river (Brenta), all these patterns were simplified, all geomorphic units lay at similar elevations, were not well characterized by species composition, and presented similar persistence age. This indicates that in human-disturbed rivers, channel and vegetation adjustments are closely linked in the long term, and suggests that intermediate levels of anthropogenic disturbance, such as those encountered in the Piave River, could counteract the natural, more dynamic conditions that may periodically fragment vegetated landscapes in natural rivers.
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Xu, Cailin; Li, Zizhen
2003-09-01
Focusing on the artificial vegetation protection system of the Shapotou section of Baotou-Lanzhou railway in the arid desert region of China, this paper examined the dynamics of dominant plant species and the succession pattern of artificial plant community in the process of establishing and developing regional artificial vegetation. It also studied the driving force and the ecologically intrinsic mechanism of the community succession. The results demonstrated that the species composition of the artificial vegetation dramatically changed after 40 years of succession, from original artificial plant community of shrub and semi-shrub to artificial-natural desert plant community with annual herb dominated. During the process of succession, the importance values of artificial shrubs, such as Caragana korshinskii and Hedysarum scoparius, decreased and gradually retreated from the artificial plant community, while the naturally multiplied annual herb, such as Eragrostis poaeoides, Bassia dasyphylla, Salsola ruthenica, Chloris virgata and etc., were presented one after another and gradually became dominant. Besides, Artemisia ordosica always played a key role in the community due to its ability of naturally sowing and self-replacement. This type of succession pattern was closely related to the shortage of precipitation resource in this region and the formation of soil crust which inhibited the reproduction of shrub and perennial herb with deep root systems. This study provided a theoretical ground for realizing persistent development of artificial plant community.
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Sivan, Arun; Shriram, A N; Sunish, I P; Vidhya, P T
2015-09-01
Mosquito foraging behavior is a determinant of host-vector contact and has an impact on the risk of arboviral epidemics. Therefore, blood-feeding patterns is a useful tool for assessing the role in pathogen transmission by vector mosquitoes. Competent vectors of dengue and chikungunya viz. Aedes aegypti and Aedes albopictus are widely prevalent in the Andaman and Nicobar archipelago. Considering the vector potential, medical importance of both these mosquito species and lack of information on host-feeding patterns, blood meal analysis of both these vector mosquitoes was undertaken. Biogents Sentinel traps were used for sampling blooded mosquitoes, for identifying the source of blood meal by agar gel-precipitin test. We identified vertebrate source of 147 and 104 blood meals in Ae. aegypti and Ae. albopictus from heterogeneous landscapes in South Andaman district. Results revealed that Ae. aegypti (88 %) and Ae. albopictus (49 %) fed on human and a small proportion on mammals and fowls, indicative of predominance of anthropophilism. Ae. aegypti predominantly fed on human blood (94.2 %-densely built urban, 89.8 %-low vegetation coverage, and 78.3 %-medium vegetation coverage). Anthropophilism in Ae. albopictus was maximal in densely built urban (90.5 %) and progressively decreased from low vegetation-vegetation/forested continuum (66.7, 36.4, and 8.7 %), indicating plasticity in feeding across these landscapes. Epidemiological significance of the findings is discussed.
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Using NDVI to assess vegetative land cover change in central Puget Sound.
Morawitz, Dana F; Blewett, Tina M; Cohen, Alex; Alberti, Marina
2006-03-01
We used the Normalized Difference Vegetation Index (NDVI) in the rapidly growing Puget Sound region over three 5-year time blocks between 1986-1999 at three spatial scales in 42 Watershed Administrative Units (WAUs) to assess changes in the amounts and patterns of green vegetation. On average, approximately 20% of the area in each WAU experienced significant NDVI change over each 5-year time block. Cumulative NDVI change over 15 years (summing change over each 5-year time block) was an average of approximately 60% of each WAU, but was as high as 100% in some. At the regional scale, seasonal weather patterns and green-up from logging were the primary drivers of observed increases in NDVI values. At the WAU scale, anthropogenic factors were important drivers of both positive and negative NDVI change. For example, population density was highly correlated with negative NDVI change over 15 years (r = 0.66, P < 0.01), as was road density (r = 0.71, P < 0.01). At the smallest scale (within 3 case study WAUs) land use differences such as preserving versus harvesting forest lands drove vegetation change. We conclude that large areas within most watersheds are continually and heavily impacted by the high levels of human use and development over short time periods. Our results indicate that varying patterns and processes can be detected at multiple scales using changes in NDVIa values.
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Fruits and vegetables consumption and depressive symptoms: A population-based study in Peru
Wolniczak, Isabella; Cáceres-DelAguila, José A.; Maguiña, Jorge L.
2017-01-01
Objectives Among different factors, diet patterns seem to be related to depression. The aim of this study was to evaluate the association between the consumption of fruits and/or vegetables and depressive symptoms. Methodology/Principal findings A secondary data analysis was conducted using information from a population-based survey from 25 regions from Peru. The outcome was the presence of depressive symptoms according to the Patient Health Questionnaire (cutoff ≥15 to define major depressive syndrome); whereas the exposure was the self-reported consumption of fruits and/or vegetables (in tertiles and using WHO recommendation ≥5 servings/day). The association of interest was evaluated using Poisson regression models controlling for the complex-sample survey design and potential confounders. Data from 25,901 participants were analyzed, mean age 44.2 (SD: 17.7) and 13,944 (54.0%) women. Only 910 (3.8%; 95%CI: 3.5%–4.2%) individuals reported consuming ≥5 servings of fruits and/or vegetables/day; whereas 819 (2.8%; 95%CI: 2.5%–3.1%) had depressive symptoms. Those in the lowest tertile of fruits and/or vegetables consumption had greater prevalence of depressive symptoms (PR = 1.88; 95%CI: 1.39–2.55) than those in the highest tertile. This association was stronger with fruits (PR = 1.92; 95%CI: 1.46–2.53) than vegetables (PR = 1.42; 95%CI: 1.05–1.93) alone. Conclusions An inverse relationship between consumption of fruits and/or vegetables and depressive symptoms is reported. Less than 5% of subjects reported consuming the amount of fruits and vegetables recommended by the WHO. There is a need to implement strategies to promote better diet patterns with potential impact on mental health. PMID:29023513
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NASA Technical Reports Server (NTRS)
Gamon, John A.; Huemmrich, K. Fred; Stone, Robert S.; Tweedie, Craig E.
2015-01-01
In the Arctic, earlier snowmelt and longer growing seasons due to warming have been hypothesized to increase vegetation productivity. Using the Normalized Difference Vegetation Index (NDVI) from both field and satellite measurements as an indicator of vegetation phenology and productivity, we monitored spatial and temporal patterns of vegetation growth for a coastal wet sedge tundra site near Barrow, Alaska over three growing seasons (2000-2002). Contrary to expectation, earlier snowmelt did not lead to increased productivity. Instead, productivity was associated primarily with precipitation and soil moisture, and secondarily with growing degree days, which, during this period, led to reduced growth in years with earlier snowmelt. Additional moisture effects on productivity and species distribution, operating over a longer time scale, were evident in spatial NDVI patterns associated with microtopography. Lower, wetter regions dominated by graminoids were more productive than higher, drier locations having a higher percentage of lichens and mosses, despite the earlier snowmelt at the more elevated sites. These results call into question the oft-stated hypothesis that earlier arctic growing seasons will lead to greater vegetation productivity. Rather, they agree with an emerging body of evidence from recent field studies indicating that early-season, local environmental conditions, notably moisture and temperature, are primary factors determining arctic vegetation productivity. For this coastal arctic site, early growing season conditions are strongly influenced by microtopography, hydrology, and regional sea ice dynamics, and may not be easily predicted from snowmelt date or seasonal average air temperatures alone. Our comparison of field to satellite NDVI also highlights the value of in-situ monitoring of actual vegetation responses using field optical sampling to obtain detailed information on surface conditions not possible from satellite observations alone.
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Fruits and vegetables consumption and depressive symptoms: A population-based study in Peru.
Wolniczak, Isabella; Cáceres-DelAguila, José A; Maguiña, Jorge L; Bernabe-Ortiz, Antonio
2017-01-01
Among different factors, diet patterns seem to be related to depression. The aim of this study was to evaluate the association between the consumption of fruits and/or vegetables and depressive symptoms. A secondary data analysis was conducted using information from a population-based survey from 25 regions from Peru. The outcome was the presence of depressive symptoms according to the Patient Health Questionnaire (cutoff ≥15 to define major depressive syndrome); whereas the exposure was the self-reported consumption of fruits and/or vegetables (in tertiles and using WHO recommendation ≥5 servings/day). The association of interest was evaluated using Poisson regression models controlling for the complex-sample survey design and potential confounders. Data from 25,901 participants were analyzed, mean age 44.2 (SD: 17.7) and 13,944 (54.0%) women. Only 910 (3.8%; 95%CI: 3.5%-4.2%) individuals reported consuming ≥5 servings of fruits and/or vegetables/day; whereas 819 (2.8%; 95%CI: 2.5%-3.1%) had depressive symptoms. Those in the lowest tertile of fruits and/or vegetables consumption had greater prevalence of depressive symptoms (PR = 1.88; 95%CI: 1.39-2.55) than those in the highest tertile. This association was stronger with fruits (PR = 1.92; 95%CI: 1.46-2.53) than vegetables (PR = 1.42; 95%CI: 1.05-1.93) alone. An inverse relationship between consumption of fruits and/or vegetables and depressive symptoms is reported. Less than 5% of subjects reported consuming the amount of fruits and vegetables recommended by the WHO. There is a need to implement strategies to promote better diet patterns with potential impact on mental health.
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Glade, Francisco E; Miranda, Marcelo D; Meza, Francisco J; van Leeuwen, Willem J D
2016-12-01
Time series of vegetation indices and remotely sensed phenological data offer insights about the patterns in vegetation dynamics. Both are useful sources of information for analyzing and monitoring ecosystem responses to environmental variations caused by natural and anthropogenic drivers. In the semi-arid region of Chile, climate variability and recent severe droughts in addition to land-use changes pose threats to the stability of local ecosystems. Normalized difference vegetation index time series (2000-2013) data from the moderate resolution imaging spectroradiometer (MODIS) was processed to monitor the trends and patterns of vegetation productivity and phenology observed over the last decade. An analysis of the relationship between (i) vegetation productivity and (ii) precipitation and temperature data for representative natural land-use cover classes was made. Using these data and ground measurements, productivity estimates were projected for two climate change scenarios (RCP2.6 and RCP8.5) at two altitudinal levels. Results showed negative trends of vegetation productivity below 2000 m a.s.l. and positive trends for higher elevations. Phenology analysis suggested that mountainous ecosystems were starting their growing period earlier in the season, coinciding with a decreased productivity peak during the growing season. The coastal shrubland/grassland land cover class had a significant positive relation with rainfall and a significant negative relation with temperature, suggesting that these ecosystems are vulnerable to climate change. Future productivity projections indicate that under an RCP8.5 climate change scenario, productivity could decline by 12% in the period of 2060-2100, leading to a severe vegetation degradation at lower altitudes and in drier areas.
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Zellman, Kristine L.
2014-01-01
San Miguel Island is the westernmost of the California Channel Islands and one of the windiest areas on the west coast of North America. The majority of the island is covered by coastal sand dunes, which were stripped of vegetation and subsequently mobilized due to droughts and sheep ranching during the late 19th century and early 20th century. Since the removal of grazing animals, vegetation and biological soil crusts have once again stabilized many of the island's dunes. In this study, historical aerial photographs and field surveys were used to develop a chronosequence of the pattern of change in vegetation communities and biological soil crust levels of development (LOD) along a gradient of dune stabilization. Historical aerial photographs from 1929, 1954, 1977, and 2009 were georeferenced and used to delineate changes in vegetation canopy cover and active (unvegetated) dune extent among 5 historical periods (pre-1929, 1929–1954, 1954–1977, 1977–2009, and 2009–2011). During fieldwork, vegetation and biological soil crust communities were mapped along transects distributed throughout San Miguel Island's central dune field on land forms that had stabilized during the 5 time periods of interest. Analyses in a geographic information system (GIS) quantified the pattern of changes that vegetation and biological soil crust communities have exhibited on the San Miguel Island dunes over the past 80 years. Results revealed that a continuing increase in total vegetation cover and a complex pattern of change in vegetation communities have taken place on the San Miguel Island dunes since the removal of grazing animals. The highly specialized native vascular vegetation (sea rocket, dunedelion, beach-bur, and locoweed) are the pioneer stabilizers of the dunes. This pioneer community is replaced in later stages by communities that are dominated by native shrubs (coastal goldenbush, silver lupine, coyote-brush, and giant coreopsis), with apparently overlapping or cyclical succession pathways. Many of the dunes that have been stabilized the longest (since before 1929) are dominated by exotic grasses. Stands of biological soil crusts (cyanobacteria) are found only on dunes where vascular vegetation is already present. Biological soil crusts are not found on dunes exhibiting a closed vascular plant canopy, which may indicate that the role of soil crusts in dune stabilization on the island is transitory. Particle-size analyses of soil samples from the study area reveal that higher biological soil crust LOD is positively correlated with increasing fine grain content. The findings indicate that changes in vegetation communities may be the most rapid at earlier and later stages of dune stabilization and that regular monitoring of dunes may help to identify the interactions between vegetation and soil crusts, as well as the potential transitions between native and exotic plant communities.
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Iimuro, Satoshi; Yoshimura, Yukio; Umegaki, Hiroyuki; Sakurai, Takashi; Araki, Atsushi; Ohashi, Yasuo; Iijima, Katsuya; Ito, Hideki
2012-04-01
To assess the effect of dietary patterns on all deaths and diabetes-related deaths in the Japanese Elderly Diabetes Intervention Trial (J-EDIT). We investigated relationships between that of overall mortality and dietary pattern, and diabetes-related deaths and dietary pattern as observed among 912 registered cases of the J-EDIT study, which is a prospective follow-up study of elderly Japanese type 2 diabetic patients. Factor analysis with the factor number 3 led to deriving three dietary patterns (healthy type, snack type and greasy type). The relationship between these patterns and overall mortality or diabetes-related death was investigated. Although not statistically significant, there was a lower tendency of overall mortality and diabetes-related deaths for the healthy type dietary pattern. When the tendencies of overall mortality were analyzed for "young-old," who are younger than 75 years-of age, and "old-old" of over 75 years-of-age, the mortality rate for the greasy type and healthy type dietary patterns were nearly the same and higher than the snack type dietary pattern in young-old. In contrast, in old-old, a higher mortality rate was reported for the greasy type dietary pattern and a lower mortality rate was reported for the healthy type dietary pattern. The hazard ratio by Cox regression analysis for greasy type to healthy type in old-old was 3.03 (P = 0.04, CI 1.07-8.57). Furthermore, in old-old, as vegetable consumption increased, the lower the tendency foroverall mortality, and the more fish that was consumed, the overall mortality significantly decreased (P = 0.020) in the tertile. The greasy type dietary pattern with an increased amount of sugar, fat and meat led to poor life prognosis for elderly Japanese type 2 diabetic patients. The healthy type dietary pattern rich in vegetable and fish, which is similar to the Mediterranean diet and Dietary Approach to Stop Hypertension diet, was suggested to improve life prognosis. © 2012 Japan Geriatrics Society.
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Snacking patterns, diet quality, and cardiovascular risk factors in adults
2014-01-01
Background The relationship of snacking patterns on nutrient intake and cardiovascular risk factors (CVRF) in adults is unknown. The aim of this study was to examine the associations of snacking patterns with nutrient intake, diet quality, and a selection of CVRF in adults participating in the 2001-2008 National Health and Nutrition Examination Survey. Methods 24-hour dietary recalls were used to determine intake and cluster analysis was used to identify the snacking patterns. Height and weight were obtained and the health indices that were evaluated included diastolic and systolic blood pressure, high density lipoprotein-cholesterol, low density lipoprotein cholesterol, triacylglycerides, blood glucose, and insulin. Results The sample was participants (n = 18,988) 19+ years (50% males; 11% African-Americans; 72% white, 12% Hispanic-Americans, and 5% other). Cluster analyses generated 12 distinct snacking patterns, explaining 61% of the variance in snacking. Comparisons of snacking patterns were made to the no snack pattern. It was found that miscellaneous snacks constituted the most common snacking pattern (17%) followed by cakes/cookies/pastries (12%) and sweets (9%). Most snacking patterns were associated with higher energy intakes. Snacking patterns cakes/cookies/pastries, vegetables/legumes, crackers/salty snacks, other grains and whole fruit were associated with lower intakes of saturated fatty acids. Added sugars intakes were higher in the cakes/cookies/pastries, sweets, milk desserts, and soft drinks patterns. Five snack patterns (cakes/cookies/pastries, sweets, vegetable/legumes, milk desserts, soft drinks) were associated with lower sodium intakes. Several snack patterns were associated with higher intakes of potassium, calcium, fiber, vitamin A, and magnesium. Five snacking patterns (miscellaneous snacks; vegetables/legumes; crackers/salty snacks; other grains; and whole fruit) were associated with better diet quality scores. Alcohol was associated with a lower body mass index and milk desserts were associated with a lower waist circumference. No snack patterns were associated with other CVRF studied. Conclusions Overall, several snacking patterns were associated with better diet quality than those consuming no snacks. Yet, the majority of the snacking patterns were not associated with CVRF. Education is needed to improve snacking patterns in terms of nutrients to limit in the diet along with more nutrient-dense foods to be included in snacks. PMID:24754905
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Miyake, Yoshihiro; Tanaka, Keiko; Okubo, Hitomi; Sasaki, Satoshi; Furukawa, Shinya; Arakawa, Masashi
2018-01-01
Only one Brazilian study has examined the association between dietary patterns and depressive symptoms during pregnancy. The current cross-sectional study examined this issue in Japan. Study subjects were 1744 pregnant women. Between April 2007 and March 2008, information under study was obtained. Dietary patterns were derived from a factor analysis of 33 predefined food groups based on a self-administered diet history questionnaire. Depressive symptoms were defined as a Center for Epidemiological Studies Depression Scale score ≥ 16. Adjustment was made for age, gestation, region of residence, number of children, family structure, history of depression, family history of depression, smoking, secondhand smoke exposure, employment, household income, education, and body mass index. Three dietary patterns were identified: 'healthy', characterized by high intake of green and yellow vegetables, other vegetables, mushrooms, pulses, seaweed, potatoes, fish, sea products, miso soup, sugar, and shellfish; 'Japanese', characterized by high intake of rice and miso soup; and 'Western', characterized by high intake of beef and pork, processed meat, vegetable oil, chicken, eggs, shellfish, and salt-containing seasonings. The healthy and Japanese patterns were independently inversely associated with depressive symptoms during pregnancy: the adjusted prevalence ratios (95% confidence intervals, P for trend) between extreme quartiles were 0.56 (0.43-0.73, < 0.0001) and 0.72 (0.55-0.94, 0.008), respectively. No association was observed between the Western pattern and depressive symptoms during pregnancy. Information was obtained between the 5th and 39th week of pregnancy. The healthy and Japanese dietary patterns may be inversely associated with depressive symptoms during pregnancy. Copyright © 2017 Elsevier B.V. All rights reserved.
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Steve Sutherland; Todd F. Hutchinson; Jennifer L. Windus
2003-01-01
This chapter documents patterns of species composition and diversity within the understory vegetation layer and provides a species list for the four study areas in southern Ohio. Within each of 108 plots, we recorded the frequency of all vascular plant species in sixteen 2-m² quadrats. We recorded 297 species, including 187 forbs (176 perennials, 9 annuals, 2...
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Detecting temporal change in watershed nutrient yields
James D. Wickham; Timothy G. Wade; Kurt H. Riitters
2008-01-01
Meta-analyses reveal that nutrient yields tend to be higher for watersheds dominated by anthropogenic uses (e.g., urban, agriculture) and lower for watersheds dominated by natural vegetation. One implication of this pattern is that loss of natural vegetation will produce increases in watershed nutrient yields. Yet, the same meta-analyses also reveal that, absent land-...
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Detecting Temporal Change in Watershed Nutrient Yields
James D. Wickham; Timothy G. Wade; Kurt H. Riitters
2008-01-01
Meta-analyses reveal that nutrient yields tend to be higher for watersheds dominated by anthropogenic uses (e.g., urban, agriculture) and lower for watersheds dominated by natural vegetation. One implication of this pattern is that loss of natural vegetation will produce increases in watershed nutrient yields. Yet, the same meta-analyses also reveal that, absent land-...
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Influence of environment, disturbance, and ownership on forest vegetation of coastal Oregon.
J.L. Ohmann; M.J. Gregory; T.A. Spies
2007-01-01
We used spatial predictions from gradient models to examine the influence of environment, disturbance, and ownership on patterns of forest vegetation biodiversity across a large forested region, the Oregon Coast Range (USA). Gradients in tree species composition were strongly associated with physical environment, especially climate, and insensitive to disturbance. In...
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Topography-mediated controls on local vegetation phenology estimated from MODIS vegetation index
Taehee Hwang; Conghe Song; James Vose; Lawrence Band
2011-01-01
Forest canopy phenology is an important constraint on annual water and carbon budgets, and responds to regional interannual climate variation. In steep terrain, there are complex spatial variations in phenology due to topographic influences on microclimate, community composition, and available soil moisture. In this study, we investigate spatial patterns of phenology...
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Sandstorms are frequent in the northern Chihuahuan Desert in New Mexico, an area characterized by open areas lacking vegetation, individual mesquite bushes, and mesquite coppice dunes. Field measurements of sand fluxes and wind velocities over a two year period provided a descri...
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Nürnberg, Dennis J.; Mariscal, Vicente; Bornikoel, Jan; Nieves-Morión, Mercedes; Krauß, Norbert; Herrero, Antonia
2015-01-01
ABSTRACT Many filamentous cyanobacteria produce specialized nitrogen-fixing cells called heterocysts, which are located at semiregular intervals along the filament with about 10 to 20 photosynthetic vegetative cells in between. Nitrogen fixation in these complex multicellular bacteria depends on metabolite exchange between the two cell types, with the heterocysts supplying combined-nitrogen compounds but dependent on the vegetative cells for photosynthetically produced carbon compounds. Here, we used a fluorescent tracer to probe intercellular metabolite exchange in the filamentous heterocyst-forming cyanobacterium Anabaena sp. strain PCC 7120. We show that esculin, a fluorescent sucrose analog, is incorporated by a sucrose import system into the cytoplasm of Anabaena cells. The cytoplasmic esculin is rapidly and reversibly exchanged across vegetative-vegetative and vegetative-heterocyst cell junctions. Our measurements reveal the kinetics of esculin exchange and also show that intercellular metabolic communication is lost in a significant fraction of older heterocysts. SepJ, FraC, and FraD are proteins located at the intercellular septa and are suggested to form structures analogous to gap junctions. We show that a ΔsepJ ΔfraC ΔfraD triple mutant shows an altered septum structure with thinner septa but a denser peptidoglycan layer. Intercellular diffusion of esculin and fluorescein derivatives is impaired in this mutant, which also shows a greatly reduced frequency of nanopores in the intercellular septal cross walls. These findings suggest that FraC, FraD, and SepJ are important for the formation of junctional structures that constitute the major pathway for feeding heterocysts with sucrose. PMID:25784700
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Morris, Angela D; McCombs, Gayle B; Akan, Tamer; Hynes, Wayne; Laroussi, Mounir; Tolle, Susan L
2009-01-01
Cold plasma, also known as Low Temperature Atmospheric Pressure Plasma (LTAPP) is a novel technology consisting of neutral and charged particles, including free radicals, which can be used to destroy or inactivate microorganisms. Research has been conducted regarding the effect of cold plasma on gram-positive bacteria; however, there is limited research regarding its ability to inactivate the spore-formers Geobacillus stearothermophilus and Bacillus cereus. The purpose of this study was to determine if cold plasma inactivates G. stearothermophilus and B. cereus vegetative cells and spores. Nine hundred eighty-one samples were included in this study (762 experimental and 219 controls). Experimental samples were exposed indirectly or directly to cold plasma, before plating and incubating for 16 hours. Control samples were not exposed to cold plasma. The percentage-kill and cell number reductions were calculated from Colony Forming Units (CFU). Data were statistically analyzed at the .05 level using one-way ANOVA, Kruskal Wallis and Tukey's tests. There was a statistically significant difference in the inactivation of G. stearothermophilus vegetative cells receiving indirect and direct exposure (p=0.0001 and p=0.0013, respectively), as well as for B. cereus vegetative cells and spores (p=0.0001 for direct and indirect). There was no statistically significant difference in the inactivation of G. stearothermophilus spores receiving indirect exposure (p=0.7208) or direct exposure (p=0.0835). Results demonstrate that cold plasma exposure effectively kills G. stearothermophilus vegetative cells and B. cereus vegetative cells and spores; however, G. stearothermophilus spores were not significantly inactivated.
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Terrestrial ecosystems: national inventory of vegetation and land use
Gergely, Kevin J.; McKerrow, Alexa
2013-11-12
The Gap Analysis Program (GAP)/Landscape Fire and Resource Management Planning Tools (LANDFIRE) National Terrestrial Ecosystems Data represents detailed data on the vegetation and land-use patterns of the United States, including Alaska, Hawaii, and Puerto Rico. This national dataset combines detailed land cover data generated by the GAP with LANDFIRE data (http://www.landfire.gov/). LANDFIRE is an interagency vegetation, fire, and fuel characteristics mapping program sponsored by the U.S. Department of the Interior (DOI) and the U.S. Department of Agriculture Forest Service.
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Analysis of terrestrial conditions and dynamics
NASA Technical Reports Server (NTRS)
Goward, S. N. (Principal Investigator)
1984-01-01
Land spectral reflectance properties for selected locations, including the Goddard Space Flight Center, the Wallops Flight Facility, a MLA test site in Cambridge, Maryland, and an acid test site in Burlington, Vermont, were measured. Methods to simulate the bidirectional reflectance properties of vegetated landscapes and a data base for spatial resolution were developed. North American vegetation patterns observed with the Advanced Very High Resolution Radiometer were assessed. Data and methods needed to model large-scale vegetation activity with remotely sensed observations and climate data were compiled.
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NASA Astrophysics Data System (ADS)
Sarkar, S.; Peters-Lidard, C.; Chiu, L.; Kafatos, M.
2005-12-01
Increasing population and urbanization have created stress on developing nations. The quickly shifting patterns of vegetation change in different parts of the world have given rise to the pertinent question of feedback on the climate prevailing on local to regional scales. It is now known with some certainty, that vegetation changes can affect the climate by influencing the heat and water balance. The hydrological cycle particularly is susceptible to changes in vegetation. The Monsoon rainfall forms a vital link in the hydrological cycle prevailing over South East Asia This work examines the variability of vegetation over South East Asia and assesses its impact on the monsoon rainfall. We explain the role of changing vegetation and show how this change has affected the heat and energy balance. We demonstrate the role of vegetation one season earlier in influencing rainfall intensity over specific areas in South East Asia and show the ramification of vegetation change on the summer rainfall behavior. The vegetation variability study specifically focuses on India and China, two of the largest and most populous nations. We have done an assessment to find out the key meteorological and human induced parameters affecting vegetation over the study area through a spatial analysis of monthly NDVI values. This study highlights the role of monsoon rainfall, regional climate dynamics and large scale human induced pollution to be the crucial factors governing the vegetation and vegetation distribution. The vegetation is seen to follow distinct spatial patterns that have been found to be crucial in its eventual impact on monsoon rainfall. We have carried out a series of sensitivity experiments using a land surface hydrologic modeling scheme. The vital energy and water balance parameters are identified and the daily climatological cycles are examined for possible change in behavior for different boundary conditions. It is found that the change from native deciduous forest vegetation to crop land affects monsoon rainfall in two ways: 1) The presence of cropland increases the sensible heat release from ground, increasing the chances for development of forced convection; 2) Large scale irrigation associated with spring crop development creates a moister lower boundary layer thus inducing more moist instability and free convection in the succeeding season.
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Mesodermal and axial determinants contribute to mesoderm regionalization in Bufo arenarum embryos.
Manes, Mario E; Campos Casal, Fernando H
2002-09-01
The existence of mesodermal determinants in the equator of Bufo arenarum embryos has been previously demonstrated. In this work, their role in dorso-ventral regionalization of mesoderm was studied by transferring the determinants to animal blastomeres. The transfer was performed by cleavage reorientation and cytoplasmic microinjection. Forced inclination during early cleavage caused deviation of the third cleavage plane and annexation of equatorial cytoplasm into animal quartets. Animal blastomeres from embryos oriented with the dorsal side up, incorporated ventro-equatorial cytoplasm and formed blood cells, mesenchyme, and coelomic epithelium. In contrast, animal blastomeres from embryos oriented with the ventral side up, acquired dorso-equatorial cytoplasm and developed notochord, somites, mesenchyme, coelomic epithelium and nervous tissue. In order to investigate if this dorso-ventral differentiation pattern responds to an interaction of mesodermal and axial factors, isolated 8-cell-stage animal quartets were microinjected with subcortical cytoplasm from: (a) the ventro-equatorial region of synchronous embryos; (b) the vegetal pole of uncleaved eggs; (c) a combination of both cytoplasms. As expected, the implanted ventro-equatorial cytoplasm promoted ventral mesoderm differentiation. Conversely, the joint transfer of ventro-equatorial cytoplasm and vegetal pole cytoplasm behaved as the dorso-equatorial cytoplasm, promoting dorso-lateral mesoderm and neural formation. Thus, mesoderm regionalization in B. arenarum embryos seems to be caused by a concurrent action of both mesodermal and axial determinants.
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Soltero, Sandra M.; Palacios, Cristina
2012-01-01
Objective Obesity is a public health problem in Puerto Rico. Dietary patterns that include high intakes of energy and sweetened drinks and low consumption of fruits, vegetables and fiber are associated with obesity. The aim of this study is to relate dietary patterns with body composition in obese subjects. Methods Dietary patterns were evaluated using 3-day food records. Body composition was assessed by body weight, hip and waist circumferences and % body fat, and then used to classify subjects by obesity stages using BMI and by low or high risk using WHR or % body fat. The resulting comparison groups were associated with energy, macronutrients, fruits, vegetables, fiber, and sweetened drinks intake and with meal energy density and meal frequency intake. Kruskal Wallis and Mann Whitney tests were used to compare groups and Spearman correlations were used for continuous variables. Results Thirty subjects completed the study. By BMI, 30% were obese type I, 33% type II and 37% type III; by WHR, 43% were low risk and 57% high risk; by % body fat, all were high risk. Dietary patterns were similar between groups. WHR was positively correlated with fiber consumption (r=0.42; p<0.05) and CHO intake (r=0.35; p=0.057). Conclusion In this pilot study, dietary patterns appeared similar between groups and sound with nutritional recommendations; however, we observed a poor quality of the diet due to very low intakes of fruits, vegetables and fiber and high intakes of sweetened drinks. PMID:21449494
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Chastain, R.A.; Struckhoff, M.A.; He, H.S.; Larsen, D.R.
2008-01-01
A vegetation community map was produced for the Ozark National Scenic Riverways consistent with the association level of the National Vegetation Classification System. Vegetation communities were differentiated using a large array of variables derived from remote sensing and topographic data, which were fused into independent mathematical functions using a discriminant analysis classification approach. Remote sensing data provided variables that discriminated vegetation communities based on differences in color, spectral reflectance, greenness, brightness, and texture. Topographic data facilitated differentiation of vegetation communities based on indirect gradients (e.g., landform position, slope, aspect), which relate to variations in resource and disturbance gradients. Variables derived from these data sources represent both actual and potential vegetation community patterns on the landscape. A hybrid combination of statistical and photointerpretation methods was used to obtain an overall accuracy of 63 percent for a map with 49 vegetation community and land-cover classes, and 78 percent for a 33-class map of the study area.
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Fate study of water-borne gram positive vegetative bacterial cells with Raman microscopy
NASA Astrophysics Data System (ADS)
Guicheteau, Jason; Tripathi, Ashish; Minter, Jennifer; Wilcox, Phillip; Christesen, Steven
2010-04-01
We present an initial bacterial fate study of Gram positive vegetative cells suspended in water and stored at ambient room temperature via Raman spectroscopy monitoring. Two types of cells were considered for this study: vegetative cells of Bacillus cereus, Bacillus thuringiensis which contain the polyhydroxybutyric acid (PHBA) as an energy storage compound and Bacillus subtlilis cells which do not. The cells were cultured specifically for this project. Immediately following the culturing phase, the bacteria were extracted, cleaned and at the onset of the study were suspended in de-ionized water and stored at room temperature. Aliquots of suspensions were deposited onto aluminum slides at different times and allowed to dry for Raman analysis. Spectra from multiple regions of each dried spot and each deposit time were acquired along with the bright-field and fluorescence images. Results were examined to investigate the effect of suspension time on the spectral signatures as well as the fate behavior of the three types of cells investigated. The cells were monitored daily for over a 14 period during which time the onset of starvation induced sporulation was observed.
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The spatial expression and regulation of transcription factors IDEF1 and IDEF2
Kobayashi, Takanori; Ogo, Yuko; Aung, May Sann; Nozoye, Tomoko; Itai, Reiko Nakanishi; Nakanishi, Hiromi; Yamakawa, Takashi; Nishizawa, Naoko K.
2010-01-01
Background and Aims Under conditions of low iron availability, rice plants induce genes involved in iron uptake and utilization. The iron deficiency-responsive cis-acting element binding factors 1 and 2 (IDEF1 and IDEF2) regulate transcriptional response to iron deficiency in rice roots. Clarification of the functions of IDEF1 and IDEF2 could uncover the gene regulation mechanism. Methods Spatial patterns of IDEF1 and IDEF2 expression were analysed by histochemical staining of IDEF1 and IDEF2 promoter-GUS transgenic rice lines. Expression patterns of the target genes of IDEF1 and IDEF2 were analysed using transformants with induced or repressed expression of IDEF1 or IDEF2 grown in iron-rich or in iron-deficient solutions for 1 d. Key Results IDEF1 and IDEF2 were highly expressed in the basal parts of the lateral roots and vascular bundles. IDEF1 and IDEF2 expression was dominant in leaf mesophyll and vascular cells, respectively. These expression patterns were similar under both iron-deficient and iron-sufficient conditions. IDEF1 was strongly expressed in pollen, ovaries, the aleurone layer and embryo. IDEF2 was expressed in pollen, ovaries and the dorsal vascular region of the endosperm. During seed germination, IDEF1 and IDEF2 were expressed in the endosperm and embryo. Expression of IDEF1 target genes was regulated in iron-rich roots similar to early iron-deficiency stages. In addition, the expression patterns of IDEF2 target genes were similar between iron-rich conditions and early or subsequent iron deficiency. Conclusions IDEF1 and IDEF2 are constitutively expressed during both vegetative and reproductive stages. The spatial expression patterns of IDEF1 and IDEF2 overlap with their target genes in restricted cell types, but not in all cells. The spatial expression patterns and gene regulation of IDEF1 and IDEF2 in roots are generally conserved under conditions of iron sufficiency and deficiency, suggesting complicated interactions with unknown factors for sensing and transmitting iron-deficiency signals. PMID:20197292
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Cummins, Steven; Smith, Dianna M; Taylor, Mathew; Dawson, John; Marshall, David; Sparks, Leigh; Anderson, Annie S
2009-11-01
Neighbourhood differences in access to fresh fruit and vegetables may explain social inequalities in diet. Investigations have focused on variations in cost and availability as barriers to the purchase and consumption of fresh produce; investigations of quality have been neglected. Here we investigate whether produce quality systematically varies by food store type, rural-urban location and neighbourhood deprivation in a selection of communities across Scotland. Cross-sectional survey of twelve fresh fruit and vegetable items in 288 food stores in ten communities across Scotland. Communities were selected to reflect a range of urban-rural settings and a food retail census was conducted in each location. The quality of twelve fruit and vegetable items within each food store was evaluated. Data from the Scottish Executive were used to characterise each small area by deprivation and urban-rural classification. Scotland. Quality of fruit and vegetables within the surveyed stores was high. Medium-sized stores, stores in small town and rural areas, and stores in more affluent areas tended to have the highest-quality fresh fruit and vegetables. Stores where food is secondary, stores in urban settings and stores in more deprived areas tended have the lowest-quality fresh produce. Although differences in quality were not always statistically significant, patterns were consistent for the majority of fruit and vegetable items. The study provides evidence that variations in food quality may plausibly be a micro-environmental mediating variable in food purchase and consumption and help partially explain neighbourhood differences in food consumption patterns.
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2009-02-01
EEM spectra of Micrococcus lysodeikticus vegetative cells, dry............................... 24 Figure 18. EEM spectra of Micrococcus lysodeikticus...tryptophan, B. subtilis (vegetative cells) ATCC 6633, Pseudomonas fluorescens, Micrococcus lysodeikticus, Staphylococcus aureus, and Clostridium...present the EEM spectra of Pseudomonas fluorescens (dry), Yersinia pestis (dry and in water), Micrococcus lysodeikticus (dry and in water
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Application of remote sensing in the study of vegetation and soils in Idaho
NASA Technical Reports Server (NTRS)
Tisdale, E. W. (Principal Investigator)
1973-01-01
The author has identified the following significant results. Comparison of ERTS-1 imagery and USGS 1:250,000 scale maps of study areas with known ground points revealed significant map errors. These errors were sufficient to render impractical the projection of ERTS-1 imagery directly onto maps of the area. Marked differences were found in the delineation of ground features by different MSS bands. Generally, Band 4 was least useful, while Band 5 proved valuable for indicating patterns of native vegetation, cultivated areas - both dry and irrigated, lava fields, drainage basins, and deep bodies of water. Band 6 was better for landforms and drainages and for shallow bodies of water than Band 5 but inferior for indicating patterns in native vegetation and most types of cultivated land. Band 7 was best of all for indicating lava flows, water bodies, and landform features. Use of a additive color viewer-projector aided greatly in separation of images. A combination of Bands 5 and 7 with appropriate color filters proved best for separating most types of native vegetation and cultivated crops. Landform features and water bodies also showed well with this combination. The addition of Band 4 imagery to these further enhanced the identification of semi-dormant vegetation.
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Jimenez-Alfaro, Borja; Chytry, Milan; Mucina, Ladislav; Grace, James B.; Rejmanek, Marcel
2016-01-01
Broad-scale animal diversity patterns have been traditionally explained by hypotheses focused on climate–energy and habitat heterogeneity, without considering the direct influence of vegetation structure and composition. However, integrating these factors when considering plant–animal correlates still poses a major challenge because plant communities are controlled by abiotic factors that may, at the same time, influence animal distributions. By testing whether the number and variation of plant community types in Europe explain country-level diversity in six animal groups, we propose a conceptual framework in which vegetation diversity represents a bridge between abiotic factors and animal diversity. We show that vegetation diversity explains variation in animal richness not accounted for by altitudinal range or potential evapotranspiration, being the best predictor for butterflies, beetles, and amphibians. Moreover, the dissimilarity of plant community types explains the highest proportion of variation in animal assemblages across the studied regions, an effect that outperforms the effect of climate and their shared contribution with pure spatial variation. Our results at the country level suggest that vegetation diversity, as estimated from broad-scale classifications of plant communities, may contribute to our understanding of animal richness and may be disentangled, at least to a degree, from climate–energy and abiotic habitat heterogeneity.
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NASA Astrophysics Data System (ADS)
Osunmadewa, Babatunde Adeniyi; Gebrehiwot, Worku Zewdie; Csaplovics, Elmar; Adeofun, Olabinjo Clement
2018-03-01
Time series data are of great importance for monitoring vegetation phenology in the dry sub-humid regions where change in land cover has influence on biomass productivity. However few studies have inquired into examining the impact of rainfall and land cover change on vegetation phenology. This study explores Seasonal Trend Analysis (STA) approach in order to investigate overall greenness, peak of annual greenness and timing of annual greenness in the seasonal NDVI cycle. Phenological pattern for the start of season (SOS) and end of season (EOS) was also examined across different land cover types in four selected locations. A significant increase in overall greenness (amplitude 0) and a significant decrease in other greenness trend maps (amplitude 1 and phase 1) was observed over the study period. Moreover significant positive trends in overall annual rainfall (amplitude 0) was found which follows similar pattern with vegetation trend. Variation in the timing of peak of greenness (phase 1) was seen in the four selected locations, this indicate a change in phenological trend. Additionally, strong relationship was revealed by the result of the pixel-wise regression between NDVI and rainfall. Change in vegetation phenology in the study area is attributed to climatic variability than anthropogenic activities.
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Venuti, J M; Gan, L; Kozlowski, M T; Klein, W H
1993-04-01
During sea urchin development, esophageal muscle arises from secondary mesenchyme cells, descendants of the vegetal plate that delaminate from the coelomic epithelium at the end of gastrulation. In lithium-induced exogastrulae, where vegetal plate descendants evert rather than invaginate, myogenesis occurs normally, indicating that myocyte progenitors do not have to be near the future stomodeum for differentiation to occur. Vegetal plate descendants isolated along with the extracellular matrix at different times during gastrulation produce differentiated myocytes in culture as monitored by staining with a myosin heavy chain antibody. Vegetal isolates prepared at mid-gastrulation or later consistently produce differentiated myocytes whose form and position resembled their counterparts in the intact embryo, whereas vegetal isolates prepared a few hours earlier while capable of gut differentiation, as evidenced by the de novo synthesis of the endodermal surface marker Endo 1, did not produce differentiated myocytes. These results suggest that sometime after early gastrulation, a subset of secondary mesenchyme cells are competent to differentiate into muscle cells. RNase protection assays showed that the accumulation of sea urchin myogenic factor (SUM-1) mRNA is likely to be coincident with the earliest demonstrable commitment of myogenic precursors. Premature expression of SUM-1 coding sequences in mesenchyme blastulae resulted in the activation of muscle-specific enhancer elements, demonstrating that SUM-1 can function precociously in the early embryo. However, SUM-1 expressed in this manner did not activate the endogenous MHC gene, nor induce premature or ectopic production of muscle cells.
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Effect of grazing on vegetation and soil of the heuweltjieveld in the Succulent Karoo, South Africa
NASA Astrophysics Data System (ADS)
Schmiedel, Ute; Röwer, Inga Ute; Luther-Mosebach, Jona; Dengler, Jürgen; Oldeland, Jens; Gröngröft, Alexander
2016-11-01
We asked how historical and recent grazing intensity affect the patchy landscape of the heuweltjieveld in the semi-arid biodiversity hotspot Succulent Karoo. The study was carried out on a communal farmland 80 km south-west of Springbok, in Namaqualand. Heuweltjies are roughly circular earth mounds that are regularly distributed in this landscape. We sampled plant species and life-form composition, diversity measures, habitat and soil variables in 100 m2 plots, placed in three visually distinguishable heuweltjie zones (centre, fringe, and matrix) and distributed across grazing camps with different recent and historic grazing intensities. Differences between heuweltjie zones were assessed with ANOVAs and multiple linear regressions. The effect of past and recent grazing intensity on soil and plant variables was analysed by Generalized Linear Models for each heuweltjie zone separately. The three zones constituted clearly distinguishable units in terms of vegetation and soil characteristics. Soil pH and cover of annual plants increased from matrix to centres, while total vegetation cover, species richness and perennial plant cover decreased in the same direction. Historic (pre-2000) grazing patterns had the strongest effects on fringes, showing the strongest soil and vegetation-related signs of overutilization with increased stocking density. Centres showed signs of overutilization irrespective of the stocking density. The much shorter exposure to recent grazing pattern (post-2000), which was nearly inverse to the historic grazing pattern, showed increase of vegetation cover (centres) and species richness (matrix) with recent grazing intensity. We interpret these effects as still visible responses of the lower grazing intensity in these camps during the historic period. No recovery under recent grazing was observed at any of the zones. We conclude that irrespective of their conducive growing conditions, once transformed to a disturbed state, heuweltjie centres recover slowly, whereas the less impacted soil and vegetation of fringes are more responsive than centres and matrix.
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Wu, Feitong; Wills, Karen; Laslett, Laura L; Oldenburg, Brian; Jones, Graeme; Winzenberg, Tania
2017-10-01
Influences of dietary patterns on musculoskeletal health are poorly understood in middle-aged women. This cross-sectional analysis from a cohort of 347 women (aged 36-57 years) aimed to examine associations between dietary patterns and musculoskeletal health outcomes in middle-aged women. Diet was measured by the Cancer Council of Victoria FFQ. Total body bone mineral content (TB BMC), femoral neck and lumbar spine bone density (dual-energy X-ray absorptiometry), lower limbs muscle strength (LMS) and balance tests (timed up and go test, step test, functional reach test (FRT) and lateral reach test) were also measured. Exploratory factor analysis was used to identify dietary patterns and scores for each pattern generated using factor loadings with absolute values ≥0·20. Associations between food pattern scores and musculoskeletal outcomes were assessed using multivariable linear regression. Three dietary patterns were identified: 'Healthy' (high consumption of a plant-based diet - vegetables, legumes, fruit, tomatoes, nuts, snacks, garlic, whole grains and low intake of high-fat dairy products), 'high protein, high fat' (red meats, poultry, processed meats, potatoes, cruciferous and dark-yellow vegetables, fish, chips, spirits and high-fat dairy products) and 'Processed foods' (high intakes of meat pies, hamburgers, beer, sweets, fruit juice, processed meats, snacks, spirits, pizza and low intake of cruciferous vegetables). After adjustment for confounders, Healthy pattern was positively associated with LMS, whereas Processed foods pattern was inversely associated with TB BMC and FRT. The associations were not significant after accounting for multiple comparisons. There were no associations with any other outcomes. These results suggest that maintaining a healthy diet could contribute to bone acquisition, muscle strength and balance in adult life. However, while they provide some support for further investigating dietary strategies for prevention of age-related loss of muscle and deterioration in balance, the exploratory nature of the analyses means that confirmation in longitudinal studies and/or trials with pre-specified hypotheses is needed.
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NASA Astrophysics Data System (ADS)
Blichner, Sara Marie; Koren Berntsen, Terje; Stordal, Frode
2017-04-01
As our understanding of the earth system improves, it is becoming increasingly clear that vegetation and ecosystems are not only influenced by the atmosphere, but that changes in these also feed back to the atmosphere and induce changes here. One such feedback involves the emission of biogenic volatile organic compounds (BVOCs) emitted from vegetation. As BVOCs are oxidized, they become less volatile and contribute to aerosol growth and formation in the atmosphere, and can thus change the radiative balance of the atmosphere through both the direct and indirect aerosol effects. The amount and type of BVOCs emitted by vegetation depends on a myriad of variables; temperature, leaf area index (LAI), species, water availability and various types of stress (e.g. insects attacks). They generally increase with higher temperatures and under stress. These factors beg the question of how emissions will change in the future in response to both temperature increase and changes to vegetation patterns and densities. The boreal region is of particular interest because forest cover in general has been thought to have a warming effect due to trees reducing the albedo, especially when snow covers the ground. We investigate feedbacks through BVOC emissions related to the expected northward expansion of boreal forests in response to global warming with a development version of the Norwegian Earth System Model (NorESM). BVOC emissions are computed by the Model of Emissions of Gases and Aerosols from Nature 2.1 (MEGAN2.1) which is incorporated into the Community Land Model v4.5 (CLM4.5). The atmospheric component is CAM5.3-Oslo. We will present preliminary results of effects on clouds and aerosol concentrations resulting from a fixed poleward shift in boreal forests and compare the radiative effects of this to changes in surface energy fluxes. CO2-concentrations and sea surface temperatures are kept fixed in order to isolate the effects of the change in vegetation patterns. Finally, these results are compared to simulations of a future climate (corresponding to 2xCO2-concentrations) both with present-day and shifted vegetation patterns.
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Patterns of glacial-interglacial vegetation and climate variability in eastern South Africa
NASA Astrophysics Data System (ADS)
Dupont, Lydie; Caley, Thibaut; Malaizé, Bruno; Giraudeau, Jacques
2010-05-01
Vegetation is an integrated part of the earth system and our understanding needs records of its glacial-interglacial variability. Although the data coverage for South Africa is slightly better than for some other parts of Africa, there are only very few records that allow us a glimpse of the vegetation history and development through one or more late Quaternary climate cycles. The existing evidence is fragmentary and in some cases contradictory. Marine sediments can offer here continuous sequences that cover large periods of time and provide a record of a signal that integrates rather large continental regions. Core MD96-2048 has been cored off the Limpopo River mouth at 26°10'S 34°01'E in 660 m water depth. This area is under the double influence of continental discharge and Agulhas current water advection. The sedimentation is slow and continuous. The upper 5 meter (down till 250 ka) have been analysed for pollen and spores at millennial resolution. The terrestrial pollen assemblages indicate that during interglacials the vegetation of eastern South Africa and southern Mozambique largely consisted of evergreen and deciduous forests with an increase of dry deciduous forest and open woodland during interglacial optima. During glacials open mountainous shrubland extended. The pattern strongly suggests a shifting of altitudinal vegetation belts in the mountains primarily depending on temperature, although the decline of forested areas during glacial times might also be the effect of low atmospheric carbon dioxide concentrations. This pattern in eastern South Africa differs from that suggested for western South Africa, where extension of the winter rain climate seems likely, and corroborates findings of increased C4 vegetation during the Glacial of eastern South Africa. The spread of dry deciduous forest and open woodland suggests a hot and dry climate during interglacial optima. The vegetation and climate of eastern South Africa seems to follow a mid to high latitude rhythm, in which the glacial-interglacial contrast is more important than the precessional forced monsoon system of tropical Africa.
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Potential land use adjustment for future climate change adaptation in revegetated regions.
Peng, Shouzhang; Li, Zhi
2018-05-22
To adapt to future climate change, appropriate land use patterns are desired. Potential natural vegetation (PNV) emphasizing the dominant role of climate can provide a useful baseline to guide the potential land use adjustment. This work is particularly important for the revegetated regions with intensive human perturbation. However, it has received little attention. This study chose China's Loess Plateau, a typical revegetated region, as an example study area to generate the PNV patterns with high spatial resolution over 2071-2100 with a process-based dynamic vegetation model (LPJ-GUESS), and further investigated the potential land use adjustment through comparing the simulated and observed land use patterns. Compared with 1981-2010, the projected PNV over 2071-2100 would have less forest and more steppe because of drier climate. Subsequently, 25.3-55.0% of the observed forests and 79.3-91.9% of the observed grasslands in 2010 can be kept over 2071-2100, and the rest of the existing forested area and grassland were expected to be more suitable for steppes and forests, respectively. To meet the request of China's Grain for Green Project, 60.9-84.8% of the existing steep farmland could be converted to grassland and the other for forest. Our results highlight the importance in adjusting the existing vegetation pattern to adapt to climate change. The research approach is extendable and provides a framework to evaluate the sustainability of the existing land use pattern under future climate. Copyright © 2018 Elsevier B.V. All rights reserved.
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Haire-Joshu, Debra; Kreuter, Matthew K; Holt, Cheryl; Steger-May, Karen
2004-01-01
This exploratory study examined how estimates of one's fruit and vegetable intake in childhood are related to 3 current dietary behaviors among African American women: intake of fruits and vegetables, exposure to and preference for fruits and vegetables, and preference for trying new foods. Baseline data from a randomized dietary intervention trial. Ten urban public health centers in St. Louis, Missouri. 1227 African American women. A 33-item fruit and vegetable food frequency questionnaire, items measuring estimates of childhood fruit and vegetable intake, adult fruit and vegetable intake, exposure to and preference for fruit and vegetable, and preference for trying new foods. Linear regression evaluated the association between predictors and continuous measures; logistic regression determined the association between predictors and categorical measures. Estimates of one's vegetable intake as a child were significantly related to exposure and preference for both fruits and vegetables, trying of new foods, and intake of both fruits and vegetables in adulthood. Estimates of eating fruit as a child were not significantly associated with these adult dietary behaviors. Developmental influences on adult dietary patterns may be stronger for vegetables than fruits among African American women. Additional emphasis is needed regarding exposure to and preference for vegetable intake in childhood.
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de Jonge, Ester Al; Kiefte-de Jong, Jessica C; Hofman, Albert; Uitterlinden, André G; Kieboom, Brenda Ct; Voortman, Trudy; Franco, Oscar H; Rivadeneira, Fernando
2017-01-01
Evidence on the association between dietary patterns, measures of hip bone geometry, and subsequent fracture risk are scarce. The objective of this study was to evaluate whether dietary patterns that explain most variation in bone mineral density (BMD) and hip bone geometry are associated with fracture risk. We included 4028 subjects aged ≥55 y from the Rotterdam study. Intake of 28 food groups was assessed with the use of food-frequency questionnaires. BMD, bone width, section modulus (SM; reflecting bending strength) and cortical buckling ratio (BR; reflecting bone instability) were measured with the use of dual-energy X-ray absorptiometry. BMD and geometry-specific dietary patterns were identified with the use of reduced rank regression. Fracture data were reported by general practitioners (median follow-up 14.8 y). We identified 4 dietary patterns. Of the 4, we named 2 patterns "fruit, vegetables, and dairy" and "sweets, animal fat, and low meat," respectively. These 2 patterns were used for further analysis. Independently of confounders, adherence to the fruit, vegetables, and dairy pattern was associated with high BMD, high SM, low BR, and low risk of fractures [HR (95% CI) for osteoporotic fractures: 0.90 (0.83, 0.96); for hip fractures: 0.85 (0.81, 0.89) per z score of dietary pattern adherence]. Adherence to the sweets, animal fat, and low meat pattern was associated with high bone width, high SM, high BR, and high risk of fractures [HR (95% CI) for osteoporotic fractures: 1.08 (1.00, 1.06); for hip fractures: 1.06 (1.02, 1.12) per z score]. The fruit, vegetables, and dairy pattern might be associated with lower fracture risk because of high BMD, high bending strength, and more stable bones. The sweets, animal fat, and low meat pattern might be associated with higher fracture risk because of widened, unstable bones, independently of BMD. Dietary recommendations associated with bone geometry in addition to BMD might influence risk of fractures. © 2017 American Society for Nutrition.
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Riparian vegetation recovery patterns following stream channelization: a geomorphic perspective
Hupp, C.R.
1992-01-01
Hundreds of kilometres of West Tennessee streams have been channelized since the turn of the century. After a stream is straightened, dredged, or cleared, basin-wide ecologic, hydrologic, and geomorphic processes bring about an integrated, characteristic recovery sequence. The rapid pace of channel responses to channelization provides an opportunity to document and interpret vegetation recovery patterns relative to otherwise long-term, concomitant evolution of river geomorphology. The linkage of channel bed aggradation, woody vegetation establishment, and bank accretion all lead to recovery of the channel. Pioneer species are hardy and fast growing, and can tolerate moderate amounts of slope instability and sediment deposition; these species include river birch (Betula nigra), black willow (Salix nigra), boxelder (Acer negundo), and silver maple (Acer saccharinum). High stem densities and root-mass development appear to enhance bank stability. Tree-ring analyses suggest that on average 65 yr may be required for recovery after channelization. -from Author
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NASA Astrophysics Data System (ADS)
Martinez-Garcia, Ricardo; Calabrese, Justin M.; Hernandez-Garcia, Emilio; Lopez, Cristobal
2014-05-01
Regular patterns and spatial organization of vegetation have been observed in many arid and semiarid ecosystems worldwide, covering a diverse range of plant taxa and soil types. A key common ingredient in these systems is that plant growth is severely limited by water availability, and thus plants likely compete strongly for water. The study of such patterns is especially interesting because their features may reveal much about the underlying physical and biological processes that generated them in addition to giving information on the characteristics of the ecosystem. It is possible, for instance, to infer their resilience against anthropogenic disturbances or climatic changes that could cause abrupt shifts in the system and lead it to a desert state. Therefore much research has focused on identifying the underlying mechanisms that can produce spatial patterning in water-limited systems (Klausmeier, 1999). They are believed to arise from the interplay between long-range competition and facilitation processes acting at smaller distances (Borgogno et al., 2009). This combination of mechanisms is justified by arguing that water percolates more readily through the soil in vegetated areas (short range), and that plants compete for water resources over greater distances via long lateral roots (long range). However, recent studies have shown that even in the limit of local facilitation patterns may still appear (Martinez-Garcia et al., 2013). In this work (Martinez-Garcia et al., 2013b), we show that, under rather general conditions, long-range competition alone is the minimal ingredient to shape gapped and stripped vegetation patterns typical of models that also account for facilitation in addition to competition. To this end we propose a simple, general model for the dynamics of vegetation, which includes only long-range competition between plants. Competition is introduced through a nonlocal term, where the kernel function quantifies the intensity of the interaction and its range. When the finite range of the competitive interaction is considered used kernel functions with a finite range, whose Fourier transform may have negative values, patterns emerge in the system. This is a rather general condition if we consider the finite length of the roots responsible of long-range competition for water in plant ecosystems.Therefore, our findings support the notion that, under fairly broad conditions, only competition is required for patterns to occur and suggest that the role of short-range facilitation mechanisms may not be as fundamental to pattern formation as has previously been thought. REFERENCES: C.A. Klausmeier, Science, 284, 1826-1828 (1999). F. Borgogno, P. D'Odorico, F. Laio and L. Ridolfi, Reviews of Geophysics, 4, RG1005 (2009). R. Martinez-Garcia, J.M. Calabrese, and C. Lopez, Journal of Theoretical Biology, 333, 156-165 (2013). R. Martinez-Garcia, J. M. Calabrese, E. Hernandez-Garcia, and C. Lopez, Geophysical Research Letters, 40, 6143-6147,(2013).
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Evolving soils and hydrologic connectivity in semiarid hillslopes
NASA Astrophysics Data System (ADS)
Saco, Patricia M.
2015-04-01
Soil moisture availability is essential for the stability and resilience of semiarid ecosystems. In these ecosystems the amount of soil moisture available for vegetation growth and survival is intrinsically related to the way water is redistributed, that is from source to sink areas, and therefore prescribed by the hydrologic connectivity of the landscape. Recent studies have shown that hydrologic connectivity is highly dynamic and linked to the coevolution of geomorphic, soil and vegetation structures at a variety of spatial and temporal scales. This study investigates the effect of evolving soil depths on hydrologic connectivity using a modelling framework. The focus is on Australian semiarid hillslopes with patterned vegetation that result from coevolving landforms, soils, water redistribution, and vegetation patterns. We present and analyse results from simulations using a coupled landform evolution-dynamic vegetation model, which includes a soil depth evolution module and accounts for soil production and sediment erosion and deposition processes. We analyse the effect of soils depths on surface connectivity for a range of biotic (plant functional type strategies) and abiotic (slope and erodibility) conditions. The analysis shows that different plant functional types, through their varying facilitation strategies, have a profound effect on soils depths and therefore affect hydrologic connectivity and soil moisture patterns. This interplay becomes particularly important for systems that coevolve to have very shallow soils. In this case soil depth becomes the key factor prescribing surface connectivity and available soil moisture for plants, which affect the recovery of the system after disturbance. Conditions for the existence of threshold behaviour for which small perturbations can trigger a sudden increase in hydrologic connectivity, reduced soil moisture availability and decrease in productivity leading to degraded states are investigated. Critical implications for effective restoration efforts are discussed.
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NASA Astrophysics Data System (ADS)
Flantua, S. G. A.; Hooghiemstra, H.; Vuille, M.; Behling, H.; Carson, J. F.; Gosling, W. D.; Hoyos, I.; Ledru, M. P.; Montoya, E.; Mayle, F.; Maldonado, A.; Rull, V.; Tonello, M. S.; Whitney, B. S.; González-Arango, C.
2015-07-01
An improved understanding of present-day climate variability and change relies on high-quality data sets from the past two millennia. Global efforts to reconstruct regional climate modes are in the process of validating and integrating paleo-proxies. For South America, however, the full potential of vegetation records for evaluating and improving climate models has hitherto not been sufficiently acknowledged due to its unknown spatial and temporal coverage. This paper therefore serves as a guide to high-quality pollen records that capture environmental variability during the last two millennia. We identify the pollen records with the required temporal characteristics for PAGES-2 ka climate modelling and we discuss their sensitivity to the spatial signature of climate modes throughout the continent. Diverse patterns of vegetation response to climate change are observed, with more similar patterns of change in the lowlands and varying intensity and direction of responses in the highlands. Pollen records display local scale responses to climate modes, thus it is necessary to understand how vegetation-climate interactions might diverge under variable settings. Additionally, pollen is an excellent indicator of human impact through time. Evidence for human land use in pollen records is useful for archaeological hypothesis testing and important in distinguishing natural from anthropogenically driven vegetation change. We stress the need for the palynological community to be more familiar with climate variability patterns to correctly attribute the potential causes of observed vegetation dynamics. The LOTRED-SA-2 k initiative provides the ideal framework for the integration of the various paleoclimatic sub-disciplines and paleo-science, thereby jumpstarting and fostering multi-disciplinary research into environmental change on centennial and millennial time scales.
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Ohri-Vachaspati, Punam; Turner, Lindsey; Chaloupka, Frank J
2012-06-01
Dietary intake among children in the United States falls short of national recommendations. Schools can play an important role in improving children's preferences and food consumption patterns. The US Department of Agriculture's Fresh Fruit and Vegetable Program (FFVP) aims to improve children's nutrient intake patterns by offering fresh fruits and vegetables as snacks outside the reimbursable meals programs in elementary schools that serve large numbers of low-income children. Using a nationally representative sample of public elementary schools, this cross-sectional study investigated FFVP participation patterns among schools by demographic and school characteristics. Further, the study investigated the association between FFVP participation and availability of fresh fruits, salads, and vegetables at lunch as reported by school administrators and foodservice staff. Data collected via a mail-back survey from 620 public elementary schools participating in the National School Lunch Program during 2009-2010 were analyzed. Almost 70% of the FFVP-participating schools had a majority of students (>50%) eligible for free and reduced-cost meals. Participating in US Department of Agriculture Team Nutrition Program and having a registered dietitian or a nutritionist on staff were significantly associated with FFVP participation. Based on the results from logistic regression analyses schools participating in the FFVP were significantly more likely (odds ratio 2.07; 95% CI 1.12 to 3.53) to serve fresh fruit during lunch meals. Slightly >25% of public elementary schools across the United States participated in the FFVP, and participation was associated with healthier food availability in school lunches. Copyright © 2012 Academy of Nutrition and Dietetics. Published by Elsevier Inc. All rights reserved.
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Choi, Kwanghun; Spohn, Marie; Park, Soo Jin; Huwe, Bernd; Ließ, Mareike
2017-01-01
Nitrogen (N) and phosphorus (P) in topsoils are critical for plant nutrition. Relatively little is known about the spatial patterns of N and P in the organic layer of mountainous landscapes. Therefore, the spatial distributions of N and P in both the organic layer and the A horizon were analyzed using a light detection and ranging (LiDAR) digital elevation model and vegetation metrics. The objective of the study was to analyze the effect of vegetation and topography on the spatial patterns of N and P in a small watershed covered by forest in South Korea. Soil samples were collected using the conditioned latin hypercube method. LiDAR vegetation metrics, the normalized difference vegetation index (NDVI), and terrain parameters were derived as predictors. Spatial explicit predictions of N/P ratios were obtained using a random forest with uncertainty analysis. We tested different strategies of model validation (repeated 2-fold to 20-fold and leave-one-out cross validation). Repeated 10-fold cross validation was selected for model validation due to the comparatively high accuracy and low variance of prediction. Surface curvature was the best predictor of P contents in the organic layer and in the A horizon, while LiDAR vegetation metrics and NDVI were important predictors of N in the organic layer. N/P ratios increased with surface curvature and were higher on the convex upper slope than on the concave lower slope. This was due to P enrichment of the soil on the lower slope and a more even spatial distribution of N. Our digital soil maps showed that the topsoils on the upper slopes contained relatively little P. These findings are critical for understanding N and P dynamics in mountainous ecosystems. PMID:28837590
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Jilcott Pitts, Stephanie B; Wu, Qiang; McGuirt, Jared T; Crawford, Thomas W; Keyserling, Thomas C; Ammerman, Alice S
2013-11-01
We examined associations between access to food venues (farmers’ markets and supermarkets), shopping patterns, fruit and vegetable consumption and health indicators among women of reproductive age in eastern North Carolina, U.S.A. Access to food venues was measured using a Geographic Information System incorporating distance, seasonality and business hours, to quantify access to farmers’ markets. Produce consumption was assessed by self-report of eating five or more fruits and vegetables daily. BMI and blood pressure were assessed by clinical measurements. Poisson regression with robust variance was used for dichotomous outcomes and multiple linear regression was used for continuous outcomes. As the study occurred in a university town and university students are likely to have different shopping patterns from non-students, we stratified analyses by student status. Eastern North Carolina. Low-income women of reproductive age (18–44 years) with valid address information accessing family planning services at a local health department (n 400). Over a quarter reported ever shopping at farmers’ markets (114/400). A larger percentage of women who shopped at farmers’ markets consumed five or more fruits and vegetables daily (42.1%) than those who did not (24.0%; P < 0.001). The mean objectively measured distance to the farmers’ markets where women reported shopping was 11.4 (SD 9.0) km (7.1 (SD 5.6) miles), while the mean distance to the farmers’ market closest to the residence was 4.0 (SD 3.7) km (2.5 (SD 2.3) miles). Among non-students, those who shopped at farmers’ markets were more likely to consume five or more servings of fruits and vegetables daily. Future research should further explore potential health benefits of farmers’ markets.
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Yang, Yuting; Guan, Huade; Shen, Miaogen; Liang, Wei; Jiang, Lei
2015-02-01
Vegetation phenology is a sensitive indicator of the dynamic response of terrestrial ecosystems to climate change. In this study, the spatiotemporal pattern of vegetation dormancy onset date (DOD) and its climate controls over temperate China were examined by analysing the satellite-derived normalized difference vegetation index and concurrent climate data from 1982 to 2010. Results show that preseason (May through October) air temperature is the primary climatic control of the DOD spatial pattern across temperate China, whereas preseason cumulative precipitation is dominantly associated with the DOD spatial pattern in relatively cold regions. Temporally, the average DOD over China's temperate ecosystems has delayed by 0.13 days per year during the past three decades. However, the delay trends are not continuous throughout the 29-year period. The DOD experienced the largest delay during the 1980s, but the delay trend slowed down or even reversed during the 1990s and 2000s. Our results also show that interannual variations in DOD are most significantly related with preseason mean temperature in most ecosystems, except for the desert ecosystem for which the variations in DOD are mainly regulated by preseason cumulative precipitation. Moreover, temperature also determines the spatial pattern of temperature sensitivity of DOD, which became significantly lower as temperature increased. On the other hand, the temperature sensitivity of DOD increases with increasing precipitation, especially in relatively dry areas (e.g. temperate grassland). This finding stresses the importance of hydrological control on the response of autumn phenology to changes in temperature, which must be accounted in current temperature-driven phenological models. © 2014 John Wiley & Sons Ltd.
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Nelson, Sarah J.; Webster, Katherine E.; Loftin, Cynthia S.; Weathers, Kathleen C.
2013-01-01
Major ion and mercury (Hg) inputs to terrestrial ecosystems include both wet and dry deposition (total deposition). Estimating total deposition to sensitive receptor sites is hampered by limited information regarding its spatial heterogeneity and seasonality. We used measurements of throughfall flux, which includes atmospheric inputs to forests and the net effects of canopy leaching or uptake, for ten major ions and Hg collected during 35 time periods in 1999–2005 at over 70 sites within Acadia National Park, Maine to (1) quantify coherence in temporal dynamics of seasonal throughfall deposition and (2) examine controls on these patterns at multiple scales. We quantified temporal coherence as the correlation between all possible site pairs for each solute on a seasonal basis. In the summer growing season and autumn, coherence among pairs of sites with similar vegetation was stronger than for site-pairs that differed in vegetation suggesting that interaction with the canopy and leaching of solutes differed in coniferous, deciduous, mixed, and shrub or open canopy sites. The spatial pattern in throughfall hydrologic inputs across Acadia National Park was more variable during the winter snow season, suggesting that snow re-distribution affects net hydrologic input, which consequently affects chemical flux. Sea-salt corrected calcium concentrations identified a shift in air mass sources from maritime in winter to the continental industrial corridor in summer. Our results suggest that the spatial pattern of throughfall hydrologic flux, dominant seasonal air mass source, and relationship with vegetation in winter differ from the spatial pattern of throughfall flux in these solutes in summer and autumn. The coherence approach applied here made clear the strong influence of spatial heterogeneity in throughfall hydrologic inputs and a maritime air mass source on winter patterns of throughfall flux. By contrast, vegetation type was the most important influence on throughfall chemical flux in summer and autumn.
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Das, Arundhati; Nagendra, Harini; Anand, Madhur; Bunyan, Milind
2015-01-01
The objective of this analysis was to identify topographic and bioclimatic factors that predict occurrence of forest and grassland patches within tropical montane forest-grassland mosaics. We further investigated whether interactions between topography and bioclimate are important in determining vegetation pattern, and assessed the role of spatial scale in determining the relative importance of specific topographic features. Finally, we assessed the role of elevation in determining the relative importance of diverse explanatory factors. The study area consists of the central and southern regions of the Western Ghats of Southern India, a global biodiversity hotspot. Random forests were used to assess prediction accuracy and predictor importance. Conditional inference classification trees were used to interpret predictor effects and examine potential interactions between predictors. GLMs were used to confirm predictor importance and assess the strength of interaction terms. Overall, topographic and bioclimatic predictors classified vegetation pattern with approximately 70% accuracy. Prediction accuracy was higher for grassland than forest, and for mosaics at higher elevations. Elevation was the most important predictor, with mosaics above 2000m dominated largely by grassland. Relative topographic position measured at a local scale (within a 300m neighbourhood) was another important predictor of vegetation pattern. In high elevation mosaics, northness and concave land surface curvature were important predictors of forest occurrence. Important bioclimatic predictors were: dry quarter precipitation, annual temperature range and the interaction between the two. The results indicate complex interactions between topography and bioclimate and among topographic variables. Elevation and topography have a strong influence on vegetation pattern in these mosaics. There were marked regional differences in the roles of various topographic and bioclimatic predictors across the range of study mosaics, indicating that the same pattern of grass and forest seems to be generated by different sets of mechanisms across the region, depending on spatial scale and elevation. PMID:26121353
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Das, Arundhati; Nagendra, Harini; Anand, Madhur; Bunyan, Milind
2015-01-01
The objective of this analysis was to identify topographic and bioclimatic factors that predict occurrence of forest and grassland patches within tropical montane forest-grassland mosaics. We further investigated whether interactions between topography and bioclimate are important in determining vegetation pattern, and assessed the role of spatial scale in determining the relative importance of specific topographic features. Finally, we assessed the role of elevation in determining the relative importance of diverse explanatory factors. The study area consists of the central and southern regions of the Western Ghats of Southern India, a global biodiversity hotspot. Random forests were used to assess prediction accuracy and predictor importance. Conditional inference classification trees were used to interpret predictor effects and examine potential interactions between predictors. GLMs were used to confirm predictor importance and assess the strength of interaction terms. Overall, topographic and bioclimatic predictors classified vegetation pattern with approximately 70% accuracy. Prediction accuracy was higher for grassland than forest, and for mosaics at higher elevations. Elevation was the most important predictor, with mosaics above 2000 m dominated largely by grassland. Relative topographic position measured at a local scale (within a 300 m neighbourhood) was another important predictor of vegetation pattern. In high elevation mosaics, northness and concave land surface curvature were important predictors of forest occurrence. Important bioclimatic predictors were: dry quarter precipitation, annual temperature range and the interaction between the two. The results indicate complex interactions between topography and bioclimate and among topographic variables. Elevation and topography have a strong influence on vegetation pattern in these mosaics. There were marked regional differences in the roles of various topographic and bioclimatic predictors across the range of study mosaics, indicating that the same pattern of grass and forest seems to be generated by different sets of mechanisms across the region, depending on spatial scale and elevation.
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Gao, Xiang; Tucker, Katherine L.
2014-01-01
OBJECTIVE To determine whether dietary patterns associated with food insecurity are associated with poor longitudinal glycemic control. RESEARCH DESIGN AND METHODS In a prospective, population-based, longitudinal cohort study, we ascertained food security (Food Security Survey Module), dietary pattern (Healthy Eating Index–2005 [HEI 2005]), and hemoglobin A1c (HbA1c) in Puerto Rican adults aged 45–75 years with diabetes at baseline (2004–2009) and HbA1c at ∼2 years follow-up (2006–2012). We determined associations between food insecurity and dietary pattern and assessed whether those dietary patterns were associated with poorer HbA1c concentration over time, using multivariable-adjusted repeated subjects mixed-effects models. RESULTS There were 584 participants with diabetes at baseline and 516 at follow-up. Food-insecure participants reported lower overall dietary quality and lower intake of fruit and vegetables. A food insecurity*HEI 2005 interaction (P < 0.001) suggested that better diet quality was more strongly associated with lower HbA1c in food-insecure than food-secure participants. In adjusted models, lower follow-up HbA1c was associated with greater HEI 2005 score (β = −0.01 HbA1c % per HEI 2005 point, per year, P = 0.003) and with subscores of total vegetables (β = −0.09, P = 0.04) and dark green and orange vegetables and legumes (β = −0.06, P = 0.048). Compared with the minimum total vegetable score, a participant with the maximum score showed relative improvements of HbA1c of 0.5% per year. CONCLUSIONS Food insecurity was associated with lower overall dietary quality and lower consumption of plant-based foods, which was associated with poor longitudinal glycemic control. PMID:24969578
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Berkowitz, Seth A; Gao, Xiang; Tucker, Katherine L
2014-09-01
To determine whether dietary patterns associated with food insecurity are associated with poor longitudinal glycemic control. In a prospective, population-based, longitudinal cohort study, we ascertained food security (Food Security Survey Module), dietary pattern (Healthy Eating Index-2005 [HEI 2005]), and hemoglobin A1c (HbA1c) in Puerto Rican adults aged 45-75 years with diabetes at baseline (2004-2009) and HbA1c at ∼2 years follow-up (2006-2012). We determined associations between food insecurity and dietary pattern and assessed whether those dietary patterns were associated with poorer HbA1c concentration over time, using multivariable-adjusted repeated subjects mixed-effects models. There were 584 participants with diabetes at baseline and 516 at follow-up. Food-insecure participants reported lower overall dietary quality and lower intake of fruit and vegetables. A food insecurity*HEI 2005 interaction (P < 0.001) suggested that better diet quality was more strongly associated with lower HbA1c in food-insecure than food-secure participants. In adjusted models, lower follow-up HbA1c was associated with greater HEI 2005 score (β = -0.01 HbA1c % per HEI 2005 point, per year, P = 0.003) and with subscores of total vegetables (β = -0.09, P = 0.04) and dark green and orange vegetables and legumes (β = -0.06, P = 0.048). Compared with the minimum total vegetable score, a participant with the maximum score showed relative improvements of HbA1c of 0.5% per year. Food insecurity was associated with lower overall dietary quality and lower consumption of plant-based foods, which was associated with poor longitudinal glycemic control. © 2014 by the American Diabetes Association. Readers may use this article as long as the work is properly cited, the use is educational and not for profit, and the work is not altered.
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LPJ-GUESS Simulated North America Vegetation for 21-0 ka Using the TraCE-21ka Climate Simulation
NASA Astrophysics Data System (ADS)
Shafer, S. L.; Bartlein, P. J.
2016-12-01
Transient climate simulations that span multiple millennia (e.g., TraCE-21ka) have become more common as computing power has increased, allowing climate models to complete long simulations in relatively short periods of time (i.e., months). These climate simulations provide information on the potential rate, variability, and spatial expression of past climate changes. They also can be used as input data for other environmental models to simulate transient changes for different components of paleoenvironmental systems, such as vegetation. Long, transient paleovegetation simulations can provide information on a range of ecological processes, describe the spatial and temporal patterns of changes in species distributions, and identify the potential locations of past species refugia. Paleovegetation simulations also can be used to fill in spatial and temporal gaps in observed paleovegetation data (e.g., pollen records from lake sediments) and to test hypotheses of past vegetation change. We used the TraCE-21ka transient climate simulation for 21-0 ka from CCSM3, a coupled atmosphere-ocean general circulation model. The TraCE-21ka simulated temperature, precipitation, and cloud data were regridded onto a 10-minute grid of North America. These regridded climate data, along with soil data and atmospheric carbon dioxide concentrations, were used as input to LPJ-GUESS, a general ecosystem model, to simulate North America vegetation from 21-0 ka. LPJ-GUESS simulates many of the processes controlling the distribution of vegetation (e.g., competition), although some important processes (e.g., dispersal) are not simulated. We evaluate the LPJ-GUESS-simulated vegetation (in the form of plant functional types and biomes) for key time periods and compare the simulated vegetation with observed paleovegetation data, such as data archived in the Neotoma Paleoecology Database. In general, vegetation simulated by LPJ-GUESS reproduces the major North America vegetation patterns (e.g., forest, grassland) with regional areas of disagreement between simulated and observed vegetation. We describe the regions and time periods with the greatest data-model agreement and disagreement, and discuss some of the strengths and weaknesses of both the simulated climate and simulated vegetation data.
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Saz, Çağdaş; Türe, Cengiz; Türker, Onur Can; Yakar, Anıl
2018-03-01
An operation of microcosm-constructed wetland modules combined with microbial fuel cell device (CW-MFC) was assessed for wastewater treatment and bioelectric generation. One of the crucial aims of the present experiment is also to determine effect of vegetation on wastewater treatment process and bioelectric production in wetland matrix with microbial fuel cell. Accordingly, CW-MFC modules with vegetation had higher treatment efficiency compared to unplanted wetland module, and average COD, NH 4 + , and TP removal efficiency in vegetated wetland modules were ranged from 85 to 88%, 95 to 97%, and 95 to 97%, respectively. However, the highest NO 3 - removal (63%) was achieved by unplanted control module during the experiment period. The maximum average output voltage, power density, and Coulombic efficiency were obtained in wetland module vegetated with Typha angustifolia for 1.01 ± 0.14 V, 7.47 ± 13.7 mWatt/m 2 , and 8.28 ± 10.4%, respectively. The results suggest that the presence of Typha angustifolia vegetation in the CW-MFC matrix provides the benefits for treatment efficiency and bioelectric production; thus, it increases microbial activities which are responsible for biodegradation of organic compounds and catalyzed to electron flow from anode to cathode. Consequently, we suggest that engineers can use vegetated wetland matrix with Typha angustifolia in CW-MFC module in order to maximize treatment efficiency and bioelectric production.
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Contamination of ready-to-eat raw vegetables with Clostridium difficile in France.
Eckert, Catherine; Burghoffer, Béatrice; Barbut, Frédéric
2013-09-01
The presence of Clostridium difficile in food like shellfish, vegetables and meat has been reported in several publications during the past few years. The objective of this study was to assess the prevalence of ready-to-eat raw vegetables contaminated with C. difficile in France. One hundred and four ready-to-eat salads and vegetables were studied. Toxigenic C. difficile strains were isolated in three samples (2.9 %): two ready-to-eat salads (one heart of lettuce and one lamb's lettuce salad) and one portion of pea sprouts. The strains belonged to three different PCR ribotypes: 001, 014/020/077 and 015. The detection thresholds for vegetative cells and spores cells varied between 1 and 3 c.f.u. in 20 g salad and between 6 and 15 c.f.u. in 20 g salad, respectively, for the method employed.
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Yin, Zhaoxue; Chen, Jing; Zhang, Jian; Ren, Zeping; Dong, Kui; Kraus, Virginia B; Wang, Zhuoqun; Zhang, Mei; Zhai, Yi; Song, Pengkun; Zhao, Yanfang; Pang, Shaojie; Mi, Shengquan; Zhao, Wenhua
2018-04-09
Although dietary patterns are crucial to cognitive function, associations of dietary patterns with cognitive function have not yet been fully understood. This cross-sectional study explored dietary patterns associated with cognitive function among the older adults in underdeveloped regions, using 1504 community-dwelling older adults aged 60 and over. Diet was assessed using a food frequency questionnaire and 24-h dietary recall. Factor analysis was used to extract dietary patterns. Global cognitive function was assessed using the Mini-Mental State Examination (MMSE). Two dietary patterns, a "mushroom, vegetable, and fruits" (MVF) pattern and a "meat and soybean products" (MS) pattern, were identified. The MVF pattern, characterized by high consumption of mushrooms, vegetables, and fruits was significantly positively associated with cognitive function ( p < 0.05), with an odds ratio of (95% CIs) 0.60 (0.38, 0.94) for cognitive impairment and β (95% CIs) 0.15 (0.02, 0.29) for -log (31-MMSE score). The MS pattern, characterized by high consumption of soybean products and meat, was also associated with better cognitive function, with an odds ratio of 0.47 (95% CIs 0.30, 0.74) for cognitive impairment and β (95% CIs) 0.34 (0.21, 0.47) for -log (31-MMSE score). Our results suggested that both the MVF and MS patterns were positively associated with better cognitive function among older adults in underdeveloped regions.
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NASA Astrophysics Data System (ADS)
Heuer, A.; Casper, M. C.; Vohland, M.
2009-04-01
Processes in natural systems and the resulting patterns occur in ecological space and time. To study natural structures and to understand the functional processes it is necessary to identify the relevant spatial and temporal space at which these all occur; or with other words to isolate spatial and temporal patterns. In this contribution we will concentrate on the spatial aspects of agro-ecological data analysis. Data were derived from two agricultural plots, each of about 5 hectares, in the area of Newel, located in Western Palatinate, Germany. The plots had been conventionally cultivated with a crop rotation of winter rape, winter wheat and spring barley. Data about physical and chemical soil properties, vegetation and topography were i) collected by measurements in the field during three vegetation periods (2005-2008) and/or ii) derived from hyperspectral image data, acquired by a HyMap airborne imaging sensor (2005). To detect spatial variability within the plots, we applied three different approaches that examine and describe relationships among data. First, we used variography to get an overview of the data. A comparison of the experimental variograms facilitated to distinguish variables, which seemed to occur in related or dissimilar spatial space. Second, based on data available in raster-format basic cell statistics were conducted, using a geographic information system. Here we could make advantage of the powerful classification and visualization tool, which supported the spatial distribution of patterns. Third, we used an approach that is being used for visualization of complex highly dimensional environmental data, the Kohonen self-organizing map. The self-organizing map (SOM) uses multidimensional data that gets further reduced in dimensionality (2-D) to detect similarities in data sets and correlation between single variables. One of SOM's advantages is its powerful visualization capability. The combination of the three approaches leads to comprehensive and reasonable results, which will be presented in detail. It can be concluded, that the chosen strategy made it possible to complement preliminary findings, to validate the results of a single approach and to clearly delineate spatial patterns.
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Patterns of host adaptation in Frankliniella occidentalis among vegetable crops
USDA-ARS?s Scientific Manuscript database
The current study examined the variation in life table characteristics, and physiological, biochemical, and molecular bases of western flower thrips, Frankliniella occidentalis (Pergande) host adaptation patterns. The main objective was to determine whether host availability affects insect preferenc...
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Guay, Kevin C; Beck, Pieter S A; Berner, Logan T; Goetz, Scott J; Baccini, Alessandro; Buermann, Wolfgang
2014-10-01
Satellite-derived indices of photosynthetic activity are the primary data source used to study changes in global vegetation productivity over recent decades. Creating coherent, long-term records of vegetation activity from legacy satellite data sets requires addressing many factors that introduce uncertainties into vegetation index time series. We compared long-term changes in vegetation productivity at high northern latitudes (>50°N), estimated as trends in growing season NDVI derived from the most widely used global NDVI data sets. The comparison included the AVHRR-based GIMMS-NDVI version G (GIMMSg ) series, and its recent successor version 3g (GIMMS3g ), as well as the shorter NDVI records generated from the more modern sensors, SeaWiFS, SPOT-VGT, and MODIS. The data sets from the latter two sensors were provided in a form that reduces the effects of surface reflectance associated with solar and view angles. Our analysis revealed large geographic areas, totaling 40% of the study area, where all data sets indicated similar changes in vegetation productivity over their common temporal record, as well as areas where data sets showed conflicting patterns. The newer, GIMMS3g data set showed statistically significant (α = 0.05) increases in vegetation productivity (greening) in over 15% of the study area, not seen in its predecessor (GIMMSg ), whereas the reverse was rare (<3%). The latter has implications for earlier reports on changes in vegetation activity based on GIMMSg , particularly in Eurasia where greening is especially pronounced in the GIMMS3g data. Our findings highlight both critical uncertainties and areas of confidence in the assessment of ecosystem-response to climate change using satellite-derived indices of photosynthetic activity. Broader efforts are required to evaluate NDVI time series against field measurements of vegetation growth, primary productivity, recruitment, mortality, and other biological processes in order to better understand ecosystem responses to environmental change over large areas. © 2014 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.
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de la Estrella, Manuel; Mateo, Rubén G.; Wieringa, Jan J.; Mackinder, Barbara; Muñoz, Jesús
2012-01-01
Objectives Species Distribution Models (SDMs) are used to produce predictions of potential Leguminosae diversity in West Central Africa. Those predictions are evaluated subsequently using expert opinion. The established methodology of combining all SDMs is refined to assess species diversity within five defined vegetation types. Potential species diversity is thus predicted for each vegetation type respectively. The primary aim of the new methodology is to define, in more detail, areas of species richness for conservation planning. Methodology Using Maxent, SDMs based on a suite of 14 environmental predictors were generated for 185 West Central African Leguminosae species, each categorised according to one of five vegetation types: Afromontane, coastal, non-flooded forest, open formations, or riverine forest. The relative contribution of each environmental variable was compared between different vegetation types using a nonparametric Kruskal-Wallis analysis followed by a post-hoc Kruskal-Wallis Paired Comparison contrast. Legume species diversity patterns were explored initially using the typical method of stacking all SDMs. Subsequently, five different ensemble models were generated by partitioning SDMs according to vegetation category. Ecological modelers worked with legume specialists to improve data integrity and integrate expert opinion in the interpretation of individual species models and potential species richness predictions for different vegetation types. Results/Conclusions Of the 14 environmental predictors used, five showed no difference in their relative contribution to the different vegetation models. Of the nine discriminating variables, the majority were related to temperature variation. The set of variables that played a major role in the Afromontane species diversity model differed significantly from the sets of variables of greatest relative important in other vegetation categories. The traditional approach of stacking all SDMs indicated overall centers of diversity in the region but the maps indicating potential species richness by vegetation type offered more detailed information on which conservation efforts can be focused. PMID:22911808
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Relations between Vegetation and Geologic Framework in Barrier Island
NASA Astrophysics Data System (ADS)
Smart, N. H.; Ferguson, J. B.; Lehner, J. D.; Taylor, D.; Tuttle, L. F., II; Wernette, P. A.
2017-12-01
Barrier islands provide valuable ecosystems and protective services to coastal communities. The longevity of barrier islands is threatened by sea-level rise, human impacts, and extreme storms. The purpose of this research is to evaluate how vegetation dynamics interact with the subsurface and offshore framework geology to influence the beach and dune morphology. Beach and dune morphology can be viewed as free and/or forced behavior, where free systems are stochastic and the morphology is dependent on variations in the storm surge run-up, aeolian sediment supply and transport potential, and vegetation dynamics and persistence. Forced systems are those where patterns in the coastal morphology are determined by some other structural control, such as the underlying and offshore framework geology. Previous studies have documented the effects of geologic framework or vegetation dynamics on the beach and dunes, although none have examined possible control by vegetation dynamics in context of the geologic framework (i.e. combined free and forced behavior). Padre Island National Seashore (PAIS) was used to examine the interaction of free and forced morphology because the subsurface framework geology and surface beach and dune morphology are variable along the island. Vegetation dynamics were assessed by classifying geographically referenced historical aerial imagery into areas with vegetation and areas without vegetation, as well as LiDAR data to verify this imagery. The subsurface geologic structure was assessed using a combination of geophysical surveys (i.e. electromagnetic induction, ground-penetrating radar, and offshore seismic surveys). Comparison of the observed vegetation patterns and geologic framework leads to a series of questions surrounding how mechanistically these two drivers of coastal morphology are related. Upcoming coring and geophysical surveys will enable us to validate new and existing geophysical data. Results of this paper will help us better understand how barrier islands have responded to environmental change in the past should be integrated into current models of barrier island evolution in order to more accurately predict how the island will change over time in response to continued climatic variability.
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Guay, Kevin C; Beck, Pieter S A; Berner, Logan T; Goetz, Scott J; Baccini, Alessandro; Buermann, Wolfgang
2014-01-01
Satellite-derived indices of photosynthetic activity are the primary data source used to study changes in global vegetation productivity over recent decades. Creating coherent, long-term records of vegetation activity from legacy satellite data sets requires addressing many factors that introduce uncertainties into vegetation index time series. We compared long-term changes in vegetation productivity at high northern latitudes (>50°N), estimated as trends in growing season NDVI derived from the most widely used global NDVI data sets. The comparison included the AVHRR-based GIMMS-NDVI version G (GIMMSg) series, and its recent successor version 3g (GIMMS3g), as well as the shorter NDVI records generated from the more modern sensors, SeaWiFS, SPOT-VGT, and MODIS. The data sets from the latter two sensors were provided in a form that reduces the effects of surface reflectance associated with solar and view angles. Our analysis revealed large geographic areas, totaling 40% of the study area, where all data sets indicated similar changes in vegetation productivity over their common temporal record, as well as areas where data sets showed conflicting patterns. The newer, GIMMS3g data set showed statistically significant (α = 0.05) increases in vegetation productivity (greening) in over 15% of the study area, not seen in its predecessor (GIMMSg), whereas the reverse was rare (<3%). The latter has implications for earlier reports on changes in vegetation activity based on GIMMSg, particularly in Eurasia where greening is especially pronounced in the GIMMS3g data. Our findings highlight both critical uncertainties and areas of confidence in the assessment of ecosystem-response to climate change using satellite-derived indices of photosynthetic activity. Broader efforts are required to evaluate NDVI time series against field measurements of vegetation growth, primary productivity, recruitment, mortality, and other biological processes in order to better understand ecosystem responses to environmental change over large areas. PMID:24890614
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Quesada, Carlos Alberto; Hodnett, Martin G; Breyer, Lacê M; Santos, Alexandre J B; Andrade, Sérgio; Miranda, Heloisa S; Miranda, Antonio Carlos; Lloyd, Jon
2008-03-01
Changes in soil water content were determined in two cerrado (sensu stricto) areas with contrasting fire history and woody vegetation density. The study was undertaken near Brasília, Brazil, from 1999 to 2001. Soil water content was measured with a neutron probe in three access tubes per site to a depth of 4.7 m. One site has been protected from fire for more than 30 years and, as a consequence, has a high density of woody plants. The other site had been frequently burned, and has a high herbaceous vegetation density and less woody vegetation. Soil water uptake patterns were strongly seasonal, and despite similarities in hydrological processes, the protected area systematically used more water than the burned area. Three temporarily contiguous patterns of water absorption were differentiated, characterized by variation in the soil depth from which water was extracted. In the early dry season, vegetation used water from throughout the soil profile but with a slight preference for water in the upper soil layers. Toward the peak of the dry season, vegetation had used most or all available water from the surface to a depth of 1.7 m, but continued to extract water from greater depths. Following the first rains, all water used was from the recently wetted upper soil layers only. Evaporation rates were a linear function of soil water availability, indicating a strong coupling of atmospheric water demand and the physiological response of the vegetation.
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NASA Astrophysics Data System (ADS)
Haberlandt, U.; Gerten, D.; Schaphoff, S.; Lucht, W.
Dynamic global vegetation models are developed with the main purpose to describe the spatio-temporal dynamics of vegetation at the global scale. Increasing concern about climate change impacts has put the focus of recent applications on the sim- ulation of the global carbon cycle. Water is a prime driver of biogeochemical and biophysical processes, thus an appropriate representation of the water cycle is crucial for their proper simulation. However, these models usually lack thorough validation of the water balance they produce. Here we present a hydrological validation of the current version of the LPJ (Lund- Potsdam-Jena) model, a dynamic global vegetation model operating at daily time steps. Long-term simulated runoff and evapotranspiration are compared to literature values, results from three global hydrological models, and discharge observations from various macroscale river basins. It was found that the seasonal and spatial patterns of the LPJ-simulated average values correspond well both with the measurements and the results from the stand-alone hy- drological models. However, a general underestimation of runoff occurs, which may be attributable to the low input dynamics of precipitation (equal distribution within a month), to the simulated vegetation pattern (potential vegetation without anthro- pogenic influence), and to some generalizations of the hydrological components in LPJ. Future research will focus on a better representation of the temporal variability of climate forcing, improved description of hydrological processes, and on the consider- ation of anthropogenic land use.
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Helicobacter pylori in Vegetables and Salads: Genotyping and Antimicrobial Resistance Properties
Yahaghi, Emad; Khamesipour, Faham; Mashayekhi, Fatemeh; Safarpoor Dehkordi, Farhad; Sakhaei, Mohammad Hossein; Masoudimanesh, Mojtaba; Khameneie, Maryam Khayyat
2014-01-01
From a clinical and epidemiological perspective, it is important to know which genotypes and antibiotic resistance patterns are present in H. pylori strains isolated from salads and vegetables. Therefore, the present investigation was carried out to find this purpose. Three hundred eighty washed and unwashed vegetable samples and fifty commercial and traditional salad samples were collected from Isfahan, Iran. Samples were cultured and those found positive for H. pylori were analyzed using PCR. Antimicrobial susceptibility testing was performed using disk diffusion method. Seven out of 50 (14%) salad and 52 out of 380 (13.68%) vegetable samples harbored H. pylori. In addition, leek, lettuce, and cabbage were the most commonly contaminated samples (30%). The most prevalent virulence genes were oipA (86.44%) and cagA (57.625). VacA s1a (37.28%) and iceA1 (47.45%) were the most prevalent genotypes. Forty different genotypic combinations were recognized. S1a/cagA+/iceA1/oipA+ (33.89%), s1a/cagA+/iceA2/oipA (30.50%), and m1a/cagA+/iceA1/oipA+ (28.81%) were the most prevalent combined genotypes. Bacterial strains had the highest levels of resistance against metronidazole (77.96%), amoxicillin (67.79%), and ampicillin (61.01%). High similarity in the genotyping pattern of H. pylori among vegetable and salad samples and human specimens suggests that vegetable and salads may be the sources of the bacteria. PMID:25184146
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BAG3 protects bovine papillomavirus type 1-transformed equine fibroblasts against pro-death signals.
Cotugno, Roberta; Gallotta, Dario; d'Avenia, Morena; Corteggio, Annunziata; Altamura, Gennaro; Roperto, Franco; Belisario, Maria Antonietta; Borzacchiello, Giuseppe
2013-07-22
In human cancer cells, BAG3 protein is known to sustain cell survival. Here, for the first time, we demonstrate the expression of BAG3 protein both in equine sarcoids in vivo and in EqS04b cells, a sarcoid-derived fully transformed cell line harbouring bovine papilloma virus (BPV)-1 genome. Evidence of a possible involvement of BAG3 in equine sarcoid carcinogenesis was obtained by immunohistochemistry analysis of tumour samples. We found that most tumour samples stained positive for BAG3, even though to a different grade, while normal dermal fibroblasts from healthy horses displayed very weak staining pattern for BAG3 expression. By siRNA technology, we demonstrate in EqS04b the role of BAG3 in counteracting basal as well as chemical-triggered pro-death signals. BAG3 down-modulation was indeed shown to promote cell death and cell cycle arrest in G0/G1. In addition, we found that BAG3 silencing sensitized EqS04b cells to phenethylisothiocyanate (PEITC), a promising cancer chemopreventive/chemotherapeutic agent present in edible cruciferous vegetables. Notably, such a pro-survival role of BAG3 was less marked in E. Derm cells, an equine BPV-negative fibroblast cell line taken as a normal counterpart. Altogether our findings might suggest a mutual cooperation between BAG3 and viral oncoproteins to sustain cell survival.
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BAG3 protects Bovine Papillomavirus type 1-transformed equine fibroblasts against pro-death signals
2013-01-01
In human cancer cells, BAG3 protein is known to sustain cell survival. Here, for the first time, we demonstrate the expression of BAG3 protein both in equine sarcoids in vivo and in EqS04b cells, a sarcoid-derived fully transformed cell line harbouring bovine papilloma virus (BPV)-1 genome. Evidence of a possible involvement of BAG3 in equine sarcoid carcinogenesis was obtained by immunohistochemistry analysis of tumour samples. We found that most tumour samples stained positive for BAG3, even though to a different grade, while normal dermal fibroblasts from healthy horses displayed very weak staining pattern for BAG3 expression. By siRNA technology, we demonstrate in EqS04b the role of BAG3 in counteracting basal as well as chemical-triggered pro-death signals. BAG3 down-modulation was indeed shown to promote cell death and cell cycle arrest in G0/G1. In addition, we found that BAG3 silencing sensitized EqS04b cells to phenethylisothiocyanate (PEITC), a promising cancer chemopreventive/chemotherapeutic agent present in edible cruciferous vegetables. Notably, such a pro-survival role of BAG3 was less marked in E. Derm cells, an equine BPV-negative fibroblast cell line taken as a normal counterpart. Altogether our findings might suggest a mutual cooperation between BAG3 and viral oncoproteins to sustain cell survival. PMID:23876161
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Stratification of habitats for identifying habitat selection by Merriam's turkeys
Mark A. Rumble; Stanley H. Anderson
1992-01-01
Habitat selection patterns of Merriamâs Turkeys were compared in hierarchical analyses of three levels of habitat stratification. Habitat descriptions in first-level analyses were based on dominant species of vegetation. Habitat descriptions in second-level analyses were based on dominant species of vegetation and overstory canopy cover. Habitat descriptions in third-...
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Julia I. Burton; Lisa M. Ganio; Klaus J. Puettmann
2014-01-01
Forest understory vegetation is influenced by broad-scale variation in climate, intermediate scale variation in topography, disturbance and neighborhood interactions. However, little is known about how these multi-scale controls interact to influence observed spatial patterns. We examined relationships between the aggregated cover of understory plant species (%...