Sample records for water analog model

  1. Air-water analogy and the study of hydraulic models

    NASA Technical Reports Server (NTRS)

    Supino, Giulio

    1953-01-01

    The author first sets forth some observations about the theory of models. Then he established certain general criteria for the construction of dynamically similar models in water and in air, through reference to the perfect fluid equations and to the ones pertaining to viscous flow. It is, in addition, pointed out that there are more cases in which the analogy is possible than is commonly supposed.

  2. Electrical Circuits and Water Analogies

    ERIC Educational Resources Information Center

    Smith, Frederick A.; Wilson, Jerry D.

    1974-01-01

    Briefly describes water analogies for electrical circuits and presents plans for the construction of apparatus to demonstrate these analogies. Demonstrations include series circuits, parallel circuits, and capacitors. (GS)

  3. Stream simulation in an analog model of the ground-water system on Long Island, New York

    USGS Publications Warehouse

    Harbaugh, Arlen W.; Getzen, Rufus T.

    1977-01-01

    The stream circuits of an electric analog model of the ground-water system of Long Island were modified to more accurately represent the relationahip between streamflow and ground-water levels. Assumptions for use of the revised circuits are (1) that streams are strictly gaining, and (2) that ground-water seepage into the streams is proportional to the difference between streambed elevation and the average water-table elevation near the stream. No seepage into streams occurs when ground-water levels drop below the streambed elevation. Regional simulation of the 1962-68 drought on Long Island was significantly improved by use of the revised stream circuits.

  4. Analog-model studies of ground-water hydrology in the Houston District, Texas

    USGS Publications Warehouse

    Jorgensen, Donald G.

    1974-01-01

    The major water-bearing units in the Houston district are the Chicot and the Evangeline aquifers. The Chicot aquifer overlies the Evangeline aquifer, which is underlain by the Burkeville confining layer. Both aquifers consist of unconsolidated and discontinuous layers of sand and clay that dip toward the Gulf of Mexico. Heavy pumping of fresh water has caused large declines in the altitudes of the potentiometric surfaces in both aquifers and has created large cones of depression around Houston. The declines have caused compaction of clay layers, which has resulted in land surface subsidence and the movement of saline ground water toward the centers of the cones of depression. An electric analog model was used to study the hydrologic system and to simulate the declines in the altitudes of the potentiometric surfaces for several alternative plans of ground-water development. The results indicate that the largest part. of the pumped water comes from storage in the water-table part of the Chicot aquifer. Vertical leakage from the aquifers and water derived from the compaction of clay layers in the aquifers are also large sources of the water being pumped. The response of the system, as observed on the model, indicates that development of additional ground-water supplies from the water-table part of the Chicot aquifer north of Houston would result in a minimum decline of the altitudes of the potentiometric surfaces. Total withdrawals of about 1,000 million gallons (5.8 million cubic meters) per day may be possible without seriously, increasing subsidence or salt-water encroachment. Analyses of the recovery of water levels indicate that both land-surface subsidence and salt-water encroachment could be reduced by artificially recharging the artesian part of the aquifer.

  5. Sensitivity of snowpack storage to precipitation and temperature using spatial and temporal analog models

    NASA Astrophysics Data System (ADS)

    Luce, Charles H.; Lopez-Burgos, Viviana; Holden, Zachary

    2014-12-01

    Empirical sensitivity analyses are important for evaluation of the effects of a changing climate on water resources and ecosystems. Although mechanistic models are commonly applied for evaluation of climate effects for snowmelt, empirical relationships provide a first-order validation of the various postulates required for their implementation. Previous studies of empirical sensitivity for April 1 snow water equivalent (SWE) in the western United States were developed by regressing interannual variations in SWE to winter precipitation and temperature. This offers a temporal analog for climate change, positing that a warmer future looks like warmer years. Spatial analogs are used to hypothesize that a warmer future may look like warmer places, and are frequently applied alternatives for complex processes, or states/metrics that show little interannual variability (e.g., forest cover). We contrast spatial and temporal analogs for sensitivity of April 1 SWE and the mean residence time of snow (SRT) using data from 524 Snowpack Telemetry (SNOTEL) stations across the western U.S. We built relatively strong models using spatial analogs to relate temperature and precipitation climatology to snowpack climatology (April 1 SWE, R2=0.87, and SRT, R2=0.81). Although the poorest temporal analog relationships were in areas showing the highest sensitivity to warming, spatial analog models showed consistent performance throughout the range of temperature and precipitation. Generally, slopes from the spatial relationships showed greater thermal sensitivity than the temporal analogs, and high elevation stations showed greater vulnerability using a spatial analog than shown in previous modeling and sensitivity studies. The spatial analog models provide a simple perspective to evaluate potential futures and may be useful in further evaluation of snowpack with warming.

  6. Electrical-analog analysis of ground-water depletion in central Arizona

    USGS Publications Warehouse

    Anderson, T.W.

    1968-01-01

    The Salt River Valley and the lower Santa Cruz River basin are the two largest agricultural areas in Arizona. The extensive use of ground water for irrigation has resulted in the need for a thorough appraisal of the present and future ground-water resources. The ground-water reservoir provides 80 percent (3.2 million acre-feet) of the total annual water supply. The amount of water pumped greatly exceeds the rate at which the ground-water supply is being replenished and has resulted in water-level declines of as much as 20 feet per year in some places. The depletion problem is of economic importance because ground water will become more expensive as pumping lifts increase and well yields decrease. The use of electrical-analog modeling techniques has made it possible to predict future ground-water levels under conditions of continued withdrawal in excess of the rate of replenishment. The electrical system is a representation of the hydrologic system: resistors and capacitors represent transmissibility and storage coefficients. The analogy between the two systems is accepted when the data obtained from the model closely match the field data in this instance, measured water-level change since 1923. The prediction of future water-table conditions is accomplished by a simple extension of the pumping trends to determine the resultant effect on the regional water levels. The results of this study indicate the probable depths to water in central Arizona in 1974 and 1984 if the aquifer characteristics are accurately modeled and if withdrawal of ground water continues at the same rate and under the tame areal distribution as existed between 1958 and 1964. The greatest depths to water in 1984 will be more than 700 feet near Stanfield and more than 650 feet in Deer Valley and northeast of Gilbert. South of Eloy and northwest of Litchfield Park, a static water level of more than 550 feet is predicted. The total water-level decline in the 20-year period 1964-84 at the deepest

  7. A comparison of analog and digital modeling techniques for simulating three-dimensional ground-water flow on Long Island, New York

    USGS Publications Warehouse

    Reilly, Thomas E.; Harbaugh, Arlen W.

    1980-01-01

    A three-dimensional electric-analog model of the Long Island, NY , groundwater system constructed by the U.S. Geological Survey in the early 1970 's was used as the basis for developing a digital, three-dimensional finite-difference model. The digital model was needed to provide faster modifications and more rapid solutions to water-management questions. Results generated by the two models are depicted as potentiometric-surface maps of the upper glacial and Magothy aquifers. Results compare favorably for all parts of Long Island except the northwestern part, where hydrologic discontinuities are most prevalent and which the two models represent somewhat differently. The mathematical and hydrologic principles used in development of ground-water models, and the procedures for calibration and acceptance, are presented in nontechnical terms. (USGS)

  8. Potential development and recharge of ground water in Mill Creek Valley, Butler and Hamilton Counties, Ohio, based on analog model analysis

    USGS Publications Warehouse

    Fidler, Richard E.

    1971-01-01

    Mill Creek valley is part of the greater Cincinnati industrial area in southwestern Ohio. In 1964, nearly 30 percent of the water supply in the study area of about 27 square miles was obtained from wells in the glacial-outwash aquifer underlying the valley. Ground-water demand has increased steadily since the late 1800's, and excessive pumpage during the years of World War II caused water levels to decline to critical levels. Natural recharge to the aquifer, from precipitation, is about 8.5 mgd (million gallons per day). In 1964, the total water use was about 30 mgd, of which 8.1 mgd was obtained from wells in Mill Creek valley, and the remainder was imported from outside the basin. With rapid industrial expansion and population growth, demand for ground water is continuing to increase. By the year 2000 ground-water pumpage is expected to exceed 25 mgd. At a public hearing before the Ohio Water Commission in 1961, artificial recharge of the aquifer through injection wells was proposed as a possible solution to the Mill Creek valley water-supply problem. The present study attempts to determine the feasibility of injection-well recharge systems in the Mill Creek valley. Although basically simple, the hydrologic system in Mill Creek valley is complex in detail and is difficult to evaluate using conventional quantitative methods. Because of this complexity, an electric analog model was used to test specific development plans. Three hypothetical pumping plans were developed by projecting past pumpage data to the years 1980 and 2000. Various combinations of injection wells were tested on the model under different hypothetical conditions of pumpage. Based on analog model analysis, from three to eight inject-ion wells, with an approximate input of 2 mgd each, would reverse the trend in declining groundwater levels and provide adequate water to meet anticipated future demands.

  9. Water immersion and its computer simulation as analogs of weightlessness

    NASA Technical Reports Server (NTRS)

    Leonard, J. I.

    1982-01-01

    Experimental studies and computer simulations of water immersion are summarized and discussed with regard to their utility as analogs of weightlessness. Emphasis is placed on describing and interpreting the renal, endocrine, fluid, and circulatory changes that take place during immersion. A mathematical model, based on concepts of fluid volume regulation, is shown to be well suited to simulate the dynamic responses to water immersion. Further, it is shown that such a model provides a means to study specific mechanisms and pathways involved in the immersion response. A number of hypotheses are evaluated with the model related to the effects of dehydration, venous pressure disturbances, the control of ADH, and changes in plasma-interstitial volume. By inference, it is suggested that most of the model's responses to water immersion are plausible predictions of the acute changes expected, but not yet measured, during space flight. One important prediction of the model is that previous attempts to measure a diuresis during space flight failed because astronauts may have been dehydrated and urine samples were pooled over 24-hour periods.

  10. Self-Generated Analogical Models of Respiratory Pathways

    ERIC Educational Resources Information Center

    Lee, Yeung Chung

    2015-01-01

    Self-generated analogical models have emerged recently as alternatives to teacher-supplied analogies and seem to have good potential to promote deep learning and scientific thinking. However, studies of the ways and contexts in which students generate these models are still too limited to allow a fuller appraisal of these models' effectiveness in…

  11. Electrical-analog-model study of water resources of the Columbus area, Bartholomew County, Indiana

    USGS Publications Warehouse

    Watkins, Frank A.; Heisel, J.E.

    1970-01-01

    The Columbus study area is in part of a glacial outwash sand and gravel aquifer that was deposited in a preglacial bedrock valley. The study area extends from the north line of Bartholomew County to the south county line and includes a small part of Jackson County south of Sand Creek and east of the East Fork White River. This report area includes about 100 square miles of the aquifer. In the Columbus area, ground water in the outwash aquifer is unconfined. Results of pumping tests and estimates derived from specific-capacity data indicate that the average horizontal permeability for this aquifer is about 3,500 gallons per day per square foot. An average coefficient of storage of about 0.2 was determined from pumping tests. Transmissibilities range from near zero in some places along the boundary to about 500,000 gallons per day per foot in the thicker parts of the aquifer. About 800,000 acre-feet of water is in storage in the aquifer. This storage is equivalent to an average yield of 34 million gallons per day for about 21 years without recharge. An electrical-analog model was built to analyze the aquifer system and determine the effects of development. Analysis of the model indicates that there is more than enough water to meet the estimated needs of the city of Columbus without seriously depleting the aquifer. Additional withdrawals will affect the flow in the Flatrock River, but if the withdrawals are made south of the city, they will not affect the river any more than present pumping. Future pumping should be confined to the deepest part of the outwash aquifer and (or) to the area adjacent to the streams. On the basis of an hypothesized amount and distribution of pumping, the decline in water levels in the Columbus area as predicted by the model for the period 1970-2015 ranged from about 20 feet in the center of the areas of pumping to 3 feet or less in the areas upstream and downstream from these areas of pumping.

  12. Predicting Naming Latencies with an Analogical Model

    ERIC Educational Resources Information Center

    Chandler, Steve

    2008-01-01

    Skousen's (1989, Analogical modeling of language, Kluwer Academic Publishers, Dordrecht) Analogical Model (AM) predicts behavior such as spelling pronunciation by comparing the characteristics of a test item (a given input word) to those of individual exemplars in a data set of previously encountered items. While AM and other exemplar-based models…

  13. Analog model study of the ground-water basin of the Upper Coachella Valley, California

    USGS Publications Warehouse

    Tyley, Stephen J.

    1974-01-01

    An analog model of the ground-water basin of the upper Coachella Valley was constructed to determine the effects of imported water on ground-water levels. The model was considered verified when the ground-water levels generated by the model approximated the historical change in water levels of the ground-water basin caused by man's activities for the period 1986-67. The ground-water basin was almost unaffected by man's activities until about 1945 when ground-water development caused the water levels to begin to decline. The Palm Springs area has had the largest water-level decline, 75 feet since 1986, because of large pumpage, reduced natural inflow from the San Gorgonio Pass area, and diversions of natural inflows at Snow and Falls Creeks and Chino Canyon starting in 1945. The San Gorgonio Pass inflow had been reduced from about 18,000 acre-feet in 1986 to about 9,000 acre-feet by 1967 because of increased ground-water pumpage in the San Gorgonio Pass area, dewatering of the San Gorgonio Pass area that took place when the tunnel for the Metropolitan Water District of Southern California was drilled, and diversions of surface inflow at Snow and Falls Creeks. In addition, 1944-64 was a period of below-normal precipitation which, in part, contributed to the declines in water levels in the Coachella Valley. The Desert Hot Springs, Garnet Hill, and Mission Creek subbasins have had relatively little development; consequently, the water-level declines have been small, ranging from 5 to 15 feet since 1986. In the Point Happy area a decline of about 2 feet per year continued until 1949 when delivery of Colorado River water to the lower valley through the Coachella Canal was initiated. Since 1949 the water levels in the Point Happy area have been rising and by 1967 were above their 1986 levels. The Whitewater River subbasin includes the largest aquifer in the basin, having sustained ground-water pumpage of about 740,000 acre-feet from 1986 to 1967, and will probably

  14. Geophysical Investigations of Hypersaline Subglacial Water Systems in the Canadian Arctic: A Planetary Analog

    NASA Astrophysics Data System (ADS)

    Rutishauser, A.; Sharp, M. J.; Blankenship, D. D.; Skidmore, M. L.; Grima, C.; Schroeder, D. M.; Greenbaum, J. S.; Dowdeswell, J. A.; Young, D. A.

    2017-12-01

    Robotic exploration and remote sensing of the solar system have identified the presence of liquid water beneath ice on several planetary bodies, with evidence for elevated salinity in certain cases. Subglacial water systems beneath Earth's glaciers and ice sheets may provide terrestrial analogs for microbial habitats in such extreme environments, especially those with higher salinity. Geological data suggest that several ice caps and glaciers in the eastern Canadian High Arctic are partially underlain by evaporite-rich sedimentary rocks, and subglacial weathering of these rocks is potentially conducive to the formation of hypersaline subglacial waters. Here, we combine airborne geophysical data with geological constraints to identify and characterize hypersaline subglacial water systems beneath ice caps in Canada's Queen Elizabeth Islands. High relative bedrock reflectivity and specularity anomalies that are apparent in radio-echo sounding data indicate multiple locations where subglacial water is present in areas where modeled ice temperatures at the glacier bed are well below the pressure melting point. This suggests that these water systems are hypersaline, with solute concentrations that significantly depress the freezing point of water. From combined interpretations of geological and airborne-magnetic data, we define the geological context within which these systems have developed, and identify possible solute-sources for the inferred brine-rich water systems. We also derive subglacial hydraulic potential gradients using airborne laser altimetry and ice thickness data, and apply water routing models to derive subglacial drainage pathways. These allow us to identify marine-terminating glaciers where outflow of the brine-rich waters may be anticipated. These hypersaline subglacial water systems beneath Canadian Arctic ice caps and glaciers may represent robust microbial habitats, and potential analogs for brines that may exist beneath ice masses on planetary

  15. Pancreatic cholera syndrome: effect of a synthetic somatostatin analog on intestinal water and ion transport.

    PubMed

    Santangelo, W C; O'Dorisio, T M; Kim, J G; Severino, G; Krejs, G J

    1985-09-01

    The effect of a synthetic somatostatin analog was studied in a patient with severe secretory diarrhea due to pancreatic cholera syndrome. Basal intestinal perfusion studies indicated an absence of water and sodium absorption, and active chloride secretion in the small bowel. Intravenous administration of the somatostatin analog (1 microgram/kg.h) changed zero net water movement to absorption (122 mL/30 cm of the jejunum per hour). Chloride secretion changed to absorption (5.0 to 7.9 meq/30 cm.h), and plasma vasoactive intestinal polypeptide concentration was reduced from 330 to 45 pmol/L (normal, less than 51). When the analog was given subcutaneously, 100 micrograms twice daily, stool weight decreased, and plasma vasoactive intestinal polypeptide concentration fell toward the normal range (67 pmol/L). Plasma concentration of pancreatic polypeptide was initially elevated and dropped during intravenous infusion of somatostatin analog but returned to baseline on maintenance therapy with the analog delivered subcutaneously. The patient has not had further diarrhea during 9 months of therapy.

  16. A Simple Hydraulic Analog Model of Oxidative Phosphorylation.

    PubMed

    Willis, Wayne T; Jackman, Matthew R; Messer, Jeffrey I; Kuzmiak-Glancy, Sarah; Glancy, Brian

    2016-06-01

    Mitochondrial oxidative phosphorylation is the primary source of cellular energy transduction in mammals. This energy conversion involves dozens of enzymatic reactions, energetic intermediates, and the dynamic interactions among them. With the goal of providing greater insight into the complex thermodynamics and kinetics ("thermokinetics") of mitochondrial energy transduction, a simple hydraulic analog model of oxidative phosphorylation is presented. In the hydraulic model, water tanks represent the forward and back "pressures" exerted by thermodynamic driving forces: the matrix redox potential (ΔGredox), the electrochemical potential for protons across the mitochondrial inner membrane (ΔGH), and the free energy of adenosine 5'-triphosphate (ATP) (ΔGATP). Net water flow proceeds from tanks with higher water pressure to tanks with lower pressure through "enzyme pipes" whose diameters represent the conductances (effective activities) of the proteins that catalyze the energy transfer. These enzyme pipes include the reactions of dehydrogenase enzymes, the electron transport chain (ETC), and the combined action of ATP synthase plus the ATP-adenosine 5'-diphosphate exchanger that spans the inner membrane. In addition, reactive oxygen species production is included in the model as a leak that is driven out of the ETC pipe by high pressure (high ΔGredox) and a proton leak dependent on the ΔGH for both its driving force and the conductance of the leak pathway. Model water pressures and flows are shown to simulate thermodynamic forces and metabolic fluxes that have been experimentally observed in mammalian skeletal muscle in response to acute exercise, chronic endurance training, and reduced substrate availability, as well as account for the thermokinetic behavior of mitochondria from fast- and slow-twitch skeletal muscle and the metabolic capacitance of the creatine kinase reaction.

  17. Application of the Analogy Between Water Flow with a Free Surface and Two-dimensional Compressible Gas Flow

    NASA Technical Reports Server (NTRS)

    Orlin, W James; Lindner, Norman J; Bitterly, Jack G

    1947-01-01

    The theory of hydraulic analogy, that is, the analogy between water flow with a free surface and two-dimensional compressible gas flow and the limitations and conditions of the analogy are discussed. A test run was made using the hydraulic analogy as applied to the flow about circular cylinders at various diameters at subsonic velocities extending to the super critical range. The apparatus and techniques used in this application are described and criticized. Reasonably satisfactory agreement of pressure distributions and flow fields existed between water and airflow about corresponding bodies. This agreement indicated the possibility of extending experimental compressibility research by new methods.

  18. Application of the Analogy Between Water Flow with a Free Surface and Two-Dimensional Compressible Gas Flow

    NASA Technical Reports Server (NTRS)

    Orlin, W James; Lindner, Norman J; Butterly, Jack G

    1947-01-01

    The theory of the hydraulic analogy -- that is, the analogy between water flow with a free surface and two-dimensional compressible gas flow -- and the limitations and conditions of the analogy are discussed. A test was run using the hydraulic analogy as applied to the flow about circular cylinders of various diameters at subsonic velocities extending into the supercritical range. The apparatus and techniques used in this application are described and criticized. Reasonably satisfactory agreement of pressure distributions and flow fields existed between water and air flow about corresponding bodies. This agreement indicated the possibility of extending experimental compressibility research by new methods.

  19. Processing-optimised imaging of analog geological models by electrical capacitance tomography

    NASA Astrophysics Data System (ADS)

    Ortiz Alemán, C.; Espíndola-Carmona, A.; Hernández-Gómez, J. J.; Orozco Del Castillo, MG

    2017-06-01

    In this work, the electrical capacitance tomography (ECT) technique is applied in monitoring internal deformation of geological analog models, which are used to study structural deformation mechanisms, in particular for simulating migration and emplacement of allochtonous salt bodies. A rectangular ECT sensor was used for internal visualization of analog geologic deformation. The monitoring of analog models consists in the reconstruction of permittivity images from the capacitance measurements obtained by introducing the model inside the ECT sensor. A simulated annealing (SA) algorithm is used as a reconstruction method, and is optimized by taking full advantage of some special features in a linearized version of this inverse approach. As a second part of this work our SA image reconstruction algorithm is applied to synthetic models, where its performance is evaluated in comparison to other commonly used algorithms such as linear back-projection and iterative Landweber methods. Finally, the SA method is applied to visualise two simple geological analog models. Encouraging results were obtained in terms of the quality of the reconstructed images, as interfaces corresponding to main geological units in the analog model were clearly distinguishable in them. We found reliable results quite useful for real time non-invasive monitoring of internal deformation of analog geological models.

  20. Analogical scaffolding: Making meaning in physics through representation and analogy

    NASA Astrophysics Data System (ADS)

    Podolefsky, Noah Solomon

    This work reviews the literature on analogy, introduces a new model of analogy, and presents a series of experiments that test and confirm the utility of this model to describe and predict student learning in physics with analogy. Pilot studies demonstrate that representations (e.g., diagrams) can play a key role in students' use of analogy. A new model of analogy, Analogical Scaffolding, is developed to explain these initial empirical results. This model will be described in detail, and then applied to describe and predict the outcomes of further experiments. Two large-scale (N>100) studies will demonstrate that: (1) students taught with analogies, according to the Analogical Scaffolding model, outperform students taught without analogies on pre-post assessments focused on electromagnetic waves; (2) the representational forms used to teach with analogy can play a significant role in student learning, with students in one treatment group outperforming students in other treatment groups by factors of two or three. It will be demonstrated that Analogical Scaffolding can be used to predict these results, as well as finer-grained results such as the types of distracters students choose in different treatment groups, and to describe and analyze student reasoning in interviews. Abstraction in physics is reconsidered using Analogical Scaffolding. An operational definition of abstraction is developed within the Analogical Scaffolding framework and employed to explain (a) why physicists consider some ideas more abstract than others in physics, and (b) how students conceptions of these ideas can be modeled. This new approach to abstraction suggests novel approaches to curriculum design in physics using Analogical Scaffolding.

  1. Exploring the use of multiple analogical models when teaching and learning chemical equilibrium

    NASA Astrophysics Data System (ADS)

    Harrison, Allan G.; de Jong, Onno

    2005-12-01

    This study describes the multiple analogical models used to introduce and teach Grade 12 chemical equilibrium. We examine the teacher's reasons for using models, explain each model's development during the lessons, and analyze the understandings students derived from the models. A case study approach was used and the data were drawn from the observation of three consecutive Grade 12 lessons on chemical equilibrium, pre- and post-lesson interviews, and delayed student interviews. The key analogical models used in teaching were: the school dance; the sugar in a teacup; the pot of curry; and the busy highway. The lesson and interview data were subject to multiple, independent analyses and yielded the following outcomes: The teacher planned to use the students' prior knowledge wherever possible and he responded to student questions with stories and extended and enriched analogies. He planned to discuss where each analogy broke down but did not. The students enjoyed the teaching but built variable mental models of equilibrium and some of their analogical mappings were unreliable. A female student disliked masculine analogies, other students tended to see elements of the multiple models in isolation, and some did not recognize all the analogical mappings embedded in the teaching plan. Most students learned that equilibrium reactions are dynamic, occur in closed systems, and the forward and reverse reactions are balanced. We recommend the use of multiple analogies like these and insist that teachers always show where the analogy breaks down and carefully negotiate the conceptual outcomes.

  2. Hydrologic analysis of Mojave River Basin, California, using electric analog model

    USGS Publications Warehouse

    Hardt, W.F.

    1971-01-01

    The water needs of the Mojave River basin will increase because of population and industrial growth. The Mojave Water Agency is responsible for providing sufficient water of good quality for the full economic development of the area. The U.S. Geological Survey suggested an electric analog model of the basin as a predictive tool to aid management. About 1,375 square miles of the alluvial basin was simulated by a passive resistor-capacitor network. The Mojave River, the main source of recharge, was simulated by subdividing the river into 13 reaches, depending on intermittent or perennial flow and on phreatophytes. The water loss to the aquifer was based on records at five gaging stations. The aquifer system depends on river recharge to maintain the water table as most of the ground-water pumping and development is adjacent to the river. The accuracy and reliability of the model was assessed by comparing the water-level changes computed by the model for the period 1930-63 with the changes determined from field data for the same period. The model was used to predict the effects on the physical system by determining basin-wide water-level changes from 1930-2000 under different pumping rates and extremes in flow of the Mojave River. Future pumping was based on the 1960-63 rate, on an increase of 20 percent from this rate, and on population projections to 2000 in the Barstow area. For future predictions, the Mojave River was modeled as average flow based on 1931-65 records and also as high flow, 1937-46, and low flow, 1947-65. Other model runs included water-level change 1930-63 assuming aquifer depletion only and no recharge, effects of a well field pumping 10,000 acre-feet in 4 months north of Victorville and southeast of Yermo, and effects of importing 10,000, 35,000, and 50,800 acre-feet of water per year from the California Water Project into the Mojave River for conveyance downstream.

  3. An investigation of fluid flow during induction stroke of a water analog model of an IC engine using an innovative optical velocimetry concept: LIPA

    NASA Technical Reports Server (NTRS)

    Stier, Bernd; Falco, R. E.

    1994-01-01

    Optical measurements on an axisymmetrical quartz component engine research model were made to evaluate the flow field encountered during induction. The measurement technique is LIPA (Laser Induced Photochemical Anemometry), a non-intrusive velocimetry concept that provides an investigator of fluid flow with a tool to attain planar information about three-dimensional velocity and vorticity vectors in a single measurement step. The goal of this investigation is to further develop this measurement technique and apply it to study the induction stroke of a water analog model of a four-stroke internal combustion engine. The research conducted in the water analog model is a fundamental scientific inquiry into the flow fields that develop in the induction stroke of an engine at idling engine speeds. As this is the first investigation of its kind using LIPA technique, our goal has been to quantify, in a preliminary manner, the flow field features that develop during the intake stroke. In the process a more comprehensive understanding of the flow field features was developed, and tied to the quantification. The study evaluated the flow field of the intake stroke by estimating fields of velocity and vorticity. On the basis of these data, information about fluid dynamics during induction at engine speeds of 10, 20, and 30 RPM (corresponding to 170, 340, and 510 RPM respectively, when air is the flowing medium) for three different valve lifts was obtained. The overall development of the flow field, its energy content (kinetic, fluctuation) for the different settings of the engine parameters, vorticity information, and cyclic variations have been quantified. These have been discussed in terms of mixing performance.

  4. New cytotoxic benzosuberene analogs. Synthesis, molecular modeling and biological evaluation.

    PubMed

    Chen, Zecheng; Maderna, Andreas; Sukuru, Sai Chetan K; Wagenaar, Melissa; O'Donnell, Christopher J; Lam, My-Hanh; Musto, Sylvia; Loganzo, Frank

    2013-12-15

    In this Letter we describe the synthesis and biological evaluation of new benzosuberene analogs with structural modifications on the B-ring. The focus was initially to probe the chemical space around the B-ring C-8 position. This position was readily available for derivatization chemistry using our recently developed new synthesis for this compound class. Furthermore, we describe two new B-ring analogs, one containing a diene and the other a cyclic ether group. Both new analogs show excellent potencies in tumor cell proliferation assays. In addition, we describe molecular modeling studies that provide a binding rationale for reference compound 8 in the colchicine binding site using the known colchicine crystal structure. We also examine whether the cell based potency data obtained with selected new analogs are supported by modeling results. Copyright © 2013 Elsevier Ltd. All rights reserved.

  5. Using Analogy and Model to Enhance Conceptual Change in Thai Middle School Students

    ERIC Educational Resources Information Center

    Wichaidit, Sittichai; Wongyounoi, Somson; Dechsri, Precharn; Chaivisuthangkura, Parin

    2011-01-01

    This study examined conceptual change of Thai middle school students after learning photosynthesis with analogy and model. The analogy mapped key features from the analog (cooking food) to the target concept (photosynthesis). Modeling photosynthesis activity provided the opportunity for students to understand how plants use sugar to synthesize…

  6. A SPICE2 Model for the M732 Analog Timer Integrated Circuit.

    DTIC Science & Technology

    1982-06-01

    I AD-All? 019 ARMY ARMAMENT RESEARCH AND DEVELOPMENT C01MAND DOVER-ETC F/ S 1/ I A SPICES MODEL FOR THE M739 ANALOG TIMER INTEGRATED CIRCUIT. (U) I...JUN $I .J P TOBAK UNCLASSIFIED AR ID-20Di S I-AD-E06 3 NL ADI- A SPICE2 MODEL FOR THE M3 ANALOG TIMR INTERNATED CIRCIT, JOHN P. TOMA DTIC JUNE 1992 13...ARrIID-TR-82001 -;AZ/ 4 " 4. TITLE (and Subtitle) S . TYPE OF REPORT & PERIOD COVERED A SPICE2 MODEL FOR THE M732 ANALOG TIMER Final INTEGRATED CIRCUIT

  7. NASA Software Cost Estimation Model: An Analogy Based Estimation Model

    NASA Technical Reports Server (NTRS)

    Hihn, Jairus; Juster, Leora; Menzies, Tim; Mathew, George; Johnson, James

    2015-01-01

    The cost estimation of software development activities is increasingly critical for large scale integrated projects such as those at DOD and NASA especially as the software systems become larger and more complex. As an example MSL (Mars Scientific Laboratory) developed at the Jet Propulsion Laboratory launched with over 2 million lines of code making it the largest robotic spacecraft ever flown (Based on the size of the software). Software development activities are also notorious for their cost growth, with NASA flight software averaging over 50% cost growth. All across the agency, estimators and analysts are increasingly being tasked to develop reliable cost estimates in support of program planning and execution. While there has been extensive work on improving parametric methods there is very little focus on the use of models based on analogy and clustering algorithms. In this paper we summarize our findings on effort/cost model estimation and model development based on ten years of software effort estimation research using data mining and machine learning methods to develop estimation models based on analogy and clustering. The NASA Software Cost Model performance is evaluated by comparing it to COCOMO II, linear regression, and K-­ nearest neighbor prediction model performance on the same data set.

  8. Discrete stochastic analogs of Erlang epidemic models.

    PubMed

    Getz, Wayne M; Dougherty, Eric R

    2018-12-01

    Erlang differential equation models of epidemic processes provide more realistic disease-class transition dynamics from susceptible (S) to exposed (E) to infectious (I) and removed (R) categories than the ubiquitous SEIR model. The latter is itself is at one end of the spectrum of Erlang SE[Formula: see text]I[Formula: see text]R models with [Formula: see text] concatenated E compartments and [Formula: see text] concatenated I compartments. Discrete-time models, however, are computationally much simpler to simulate and fit to epidemic outbreak data than continuous-time differential equations, and are also much more readily extended to include demographic and other types of stochasticity. Here we formulate discrete-time deterministic analogs of the Erlang models, and their stochastic extension, based on a time-to-go distributional principle. Depending on which distributions are used (e.g. discretized Erlang, Gamma, Beta, or Uniform distributions), we demonstrate that our formulation represents both a discretization of Erlang epidemic models and generalizations thereof. We consider the challenges of fitting SE[Formula: see text]I[Formula: see text]R models and our discrete-time analog to data (the recent outbreak of Ebola in Liberia). We demonstrate that the latter performs much better than the former; although confining fits to strict SEIR formulations reduces the numerical challenges, but sacrifices best-fit likelihood scores by at least 7%.

  9. Analogies and the 5E Model

    ERIC Educational Resources Information Center

    Orgill, Mary Kay; Thomas, Megan

    2007-01-01

    Science classes are full of abstract or challenging concepts that are easier to understand if an analogy is used to illustrate the points. Effective analogies motivate students, clarify students' thinking, help students overcome misconceptions, and give students ways to visualize abstract concepts. When they are used appropriately, analogies can…

  10. Experiments in Sound and Structural Vibrations Using an Air-Analog Model Ducted Propulsion System

    DTIC Science & Technology

    2007-08-01

    Department of Aerospace S~and Mechanical Engineering I 20070904056 I EXPERIMENTS IN SOUND AND STRUCTURAL VIBRATIONS USING AN AIR -ANALOG MODEL DUCTED...SOUND AND STRUCTURAL * VIBRATIONS USING AN AIR -ANALOG MODEL DUCTED PROPULSION SYSTEM FINAL TECHNICAL REPORT Prepared by: Scott C. Morris Assistant...Vibration Using Air - 5b. GRANT NUMBER Analog Model Ducted Propulsion Systems N00014-1-0522 5C. PROGRAM ELEMENT NUMBER 6. AUTHOR(S) 5d. PROJECT NUMBER

  11. Digital-analog quantum simulation of generalized Dicke models with superconducting circuits

    NASA Astrophysics Data System (ADS)

    Lamata, Lucas

    2017-03-01

    We propose a digital-analog quantum simulation of generalized Dicke models with superconducting circuits, including Fermi- Bose condensates, biased and pulsed Dicke models, for all regimes of light-matter coupling. We encode these classes of problems in a set of superconducting qubits coupled with a bosonic mode implemented by a transmission line resonator. Via digital-analog techniques, an efficient quantum simulation can be performed in state-of-the-art circuit quantum electrodynamics platforms, by suitable decomposition into analog qubit-bosonic blocks and collective single-qubit pulses through digital steps. Moreover, just a single global analog block would be needed during the whole protocol in most of the cases, superimposed with fast periodic pulses to rotate and detune the qubits. Therefore, a large number of digital steps may be attained with this approach, providing a reduced digital error. Additionally, the number of gates per digital step does not grow with the number of qubits, rendering the simulation efficient. This strategy paves the way for the scalable digital-analog quantum simulation of many-body dynamics involving bosonic modes and spin degrees of freedom with superconducting circuits.

  12. Digital-analog quantum simulation of generalized Dicke models with superconducting circuits

    PubMed Central

    Lamata, Lucas

    2017-01-01

    We propose a digital-analog quantum simulation of generalized Dicke models with superconducting circuits, including Fermi- Bose condensates, biased and pulsed Dicke models, for all regimes of light-matter coupling. We encode these classes of problems in a set of superconducting qubits coupled with a bosonic mode implemented by a transmission line resonator. Via digital-analog techniques, an efficient quantum simulation can be performed in state-of-the-art circuit quantum electrodynamics platforms, by suitable decomposition into analog qubit-bosonic blocks and collective single-qubit pulses through digital steps. Moreover, just a single global analog block would be needed during the whole protocol in most of the cases, superimposed with fast periodic pulses to rotate and detune the qubits. Therefore, a large number of digital steps may be attained with this approach, providing a reduced digital error. Additionally, the number of gates per digital step does not grow with the number of qubits, rendering the simulation efficient. This strategy paves the way for the scalable digital-analog quantum simulation of many-body dynamics involving bosonic modes and spin degrees of freedom with superconducting circuits. PMID:28256559

  13. Basic Electricity--a Novel Analogy.

    ERIC Educational Resources Information Center

    Grant, Richard

    1996-01-01

    Uses the analogy of water flow to introduce concepts in basic electricity. Presents a demonstration that uses this analogy to help students grasp the relationship between current, voltage, and resistance. (JRH)

  14. Teaching Einsteinian physics at schools: part 1, models and analogies for relativity

    NASA Astrophysics Data System (ADS)

    Kaur, Tejinder; Blair, David; Moschilla, John; Stannard, Warren; Zadnik, Marjan

    2017-11-01

    The Einstein-First project aims to change the paradigm of school science teaching through the introduction of modern Einsteinian concepts of space and time, gravity and quanta at an early age. These concepts are rarely taught to school students despite their central importance to modern science and technology. The key to implementing the Einstein-First curriculum is the development of appropriate models and analogies. This paper is the first part of a three-paper series. It presents the conceptual foundation of our approach, based on simple physical models and analogies, followed by a detailed description of the models and analogies used to teach concepts of general and special relativity. Two accompanying papers address the teaching of quantum physics (Part 2) and research outcomes (Part 3).

  15. Models for Models: An Introduction to Polymer Models Employing Simple Analogies

    NASA Astrophysics Data System (ADS)

    Tarazona, M. Pilar; Saiz, Enrique

    1998-11-01

    An introduction to the most common models used in the calculations of conformational properties of polymers, ranging from the freely jointed chain approximation to Monte Carlo or molecular dynamics methods, is presented. Mathematical formalism is avoided and simple analogies, such as human chains, gases, opinion polls, or marketing strategies, are used to explain the different models presented. A second goal of the paper is to teach students how models required for the interpretation of a system can be elaborated, starting with the simplest model and introducing successive improvements until the refinements become so sophisticated that it is much better to use an alternative approach.

  16. Maxwell's contrived analogy: An early version of the methodology of modeling

    NASA Astrophysics Data System (ADS)

    Hon, Giora; Goldstein, Bernard R.

    2012-11-01

    The term "analogy" stands for a variety of methodological practices all related in one way or another to the idea of proportionality. We claim that in his first substantial contribution to electromagnetism James Clerk Maxwell developed a methodology of analogy which was completely new at the time or, to borrow John North's expression, Maxwell's methodology was a "newly contrived analogue". In his initial response to Michael Faraday's experimental researches in electromagnetism, Maxwell did not seek an analogy with some physical system in a domain different from electromagnetism as advocated by William Thomson; rather, he constructed an entirely artificial one to suit his needs. Following North, we claim that the modification which Maxwell introduced to the methodology of analogy has not been properly appreciated. In view of our examination of the evidence, we argue that Maxwell gave a new meaning to analogy; in fact, it comes close to modeling in current usage.

  17. Digital-analog quantum simulation of generalized Dicke models with superconducting circuits

    NASA Astrophysics Data System (ADS)

    Lamata, Lucas

    We propose a digital-analog quantum simulation of generalized Dicke models with superconducting circuits, including Fermi-Bose condensates, biased and pulsed Dicke models, for all regimes of light-matter coupling. We encode these classes of problems in a set of superconducting qubits coupled with a bosonic mode implemented by a transmission line resonator. Via digital-analog techniques, an efficient quantum simulation can be performed in state-of-the-art circuit quantum electrodynamics platforms, by suitable decomposition into analog qubit-bosonic blocks and collective single-qubit pulses through digital steps. Moreover, just a single global analog block would be needed during the whole protocol in most of the cases, superimposed with fast periodic pulses to rotate and detune the qubits. Therefore, a large number of digital steps may be attained with this approach, providing a reduced digital error. Additionally, the number of gates per digital step does not grow with the number of qubits, rendering the simulation efficient. This strategy paves the way for the scalable digital-analog quantum simulation of many-body dynamics involving bosonic modes and spin degrees of freedom with superconducting circuits. The author wishes to acknowledge discussions with I. Arrazola, A. Mezzacapo, J. S. Pedernales, and E. Solano, and support from Ramon y Cajal Grant RYC-2012-11391, Spanish MINECO/FEDER FIS2015-69983-P, UPV/EHU UFI 11/55 and Project EHUA14/04.

  18. Embedding Analogical Reasoning into 5E Learning Model: A Study of the Solar System

    ERIC Educational Resources Information Center

    Devecioglu-Kaymakci, Yasemin

    2016-01-01

    The purpose of this study was to investigate how the 5E learning model affects learning about the Solar System when an analogical model is utilized in teaching. The data were gathered in an urban middle school 7th grade science course while teaching relevant astronomy topics. The analogical model developed by the researchers was administered to 20…

  19. A novel prediction method about single components of analog circuits based on complex field modeling.

    PubMed

    Zhou, Jingyu; Tian, Shulin; Yang, Chenglin

    2014-01-01

    Few researches pay attention to prediction about analog circuits. The few methods lack the correlation with circuit analysis during extracting and calculating features so that FI (fault indicator) calculation often lack rationality, thus affecting prognostic performance. To solve the above problem, this paper proposes a novel prediction method about single components of analog circuits based on complex field modeling. Aiming at the feature that faults of single components hold the largest number in analog circuits, the method starts with circuit structure, analyzes transfer function of circuits, and implements complex field modeling. Then, by an established parameter scanning model related to complex field, it analyzes the relationship between parameter variation and degeneration of single components in the model in order to obtain a more reasonable FI feature set via calculation. According to the obtained FI feature set, it establishes a novel model about degeneration trend of analog circuits' single components. At last, it uses particle filter (PF) to update parameters for the model and predicts remaining useful performance (RUP) of analog circuits' single components. Since calculation about the FI feature set is more reasonable, accuracy of prediction is improved to some extent. Finally, the foregoing conclusions are verified by experiments.

  20. Prevention of acetic acid-induced colitis by desferrithiocin analogs in a rat model.

    PubMed

    Bergeron, Raymond J; Wiegand, Jan; Weimar, William R; Nguyen, John Nhut; Sninsky, Charles A

    2003-02-01

    Iron contributes significantly to the formation of reactive oxygen species via the Fenton reaction. Therefore, we assessed whether a series of desferrithiocin analogs, both carboxylic acids and hydroxamates, could (1) either promote or diminish the iron-mediated oxidation of ascorbate, (2) quench a model radical species, 2,2'-azinobis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS+), and (3) when applied topically, prevent acetic acid-induced colitis in rats. Surprisingly, most of the desferrithiocin analogs inhibited the Fenton reaction to an approximately equivalent degree; however, substantial differences were observed in the capacity of the analogs to scavenge the model radical cation. Four carboxylic acid desferrithiocin analogs and their respective N-methylhydroxamates were tested along with desferrioxamine and Rowasa, a currently accepted topical therapeutic agent for inflammatory bowel disease (IBD), in a rodent model of acetic acid-induced colitis. The colonic damage was quantitated by two independent measurements. Although neither radical scavenging nor prevention of Fenton chemistry was a definitive predictor of in vivo efficacy, the overall trend is that desferrithiocin analogs substituted with an N-methylhydroxamate in the place of the carboxylic acid are both better free radical scavengers and more active against acetic acid-induced colitis. These results represent an intriguing alternative avenue to the development of improved IBD therapeutic agents.

  1. Analogs of microgravity: head-down tilt and water immersion.

    PubMed

    Watenpaugh, Donald E

    2016-04-15

    This article briefly reviews the fidelity of ground-based methods used to simulate human existence in weightlessness (spaceflight). These methods include horizontal bed rest (BR), head-down tilt bed rest (HDT), head-out water immersion (WI), and head-out dry immersion (DI; immersion with an impermeable elastic cloth barrier between subject and water). Among these, HDT has become by far the most commonly used method, especially for longer studies. DI is less common but well accepted for long-duration studies. Very few studies exist that attempt to validate a specific simulation mode against actual microgravity. Many fundamental physical, and thus physiological, differences exist between microgravity and our methods to simulate it, and between the different methods. Also, although weightlessness is the salient feature of spaceflight, several ancillary factors of space travel complicate Earth-based simulation. In spite of these discrepancies and complications, the analogs duplicate many responses to 0 G reasonably well. As we learn more about responses to microgravity and spaceflight, investigators will continue to fine-tune simulation methods to optimize accuracy and applicability. Copyright © 2016 the American Physiological Society.

  2. Using record player demonstrations as analog models for geophysical fluids

    NASA Astrophysics Data System (ADS)

    Grannan, A. M.; Cheng, J. S.; Hawkins, E. K.; Ribeiro, A.; Aurnou, J. M.

    2015-12-01

    All celestial bodies, including stars, planets, satellites, and asteroids, rotate. The influence of rotation on the fluid layers in these bodies plays an important and diverse role, affecting many processes including oceanic and atmospheric circulation at the surface and magnetic field generation occurring in the interior. To better understand these large-scale processes, record players and containers of water are used as analog models to demonstrate the basic interplay between rotation and fluid motions. To contrast between rotating and non-rotating fluid motions, coffee creamer and food coloring are used as fluid tracers to provide a hands-on method of understanding the influence of rotation on the shapes of the planets, weather patterns, and the alignment of magnetic fields with rotational axes. Such simple demonstrations have been successfully employed for children in public outreach events and for adults in graduate level fluid dynamics courses.

  3. A Novel Prediction Method about Single Components of Analog Circuits Based on Complex Field Modeling

    PubMed Central

    Tian, Shulin; Yang, Chenglin

    2014-01-01

    Few researches pay attention to prediction about analog circuits. The few methods lack the correlation with circuit analysis during extracting and calculating features so that FI (fault indicator) calculation often lack rationality, thus affecting prognostic performance. To solve the above problem, this paper proposes a novel prediction method about single components of analog circuits based on complex field modeling. Aiming at the feature that faults of single components hold the largest number in analog circuits, the method starts with circuit structure, analyzes transfer function of circuits, and implements complex field modeling. Then, by an established parameter scanning model related to complex field, it analyzes the relationship between parameter variation and degeneration of single components in the model in order to obtain a more reasonable FI feature set via calculation. According to the obtained FI feature set, it establishes a novel model about degeneration trend of analog circuits' single components. At last, it uses particle filter (PF) to update parameters for the model and predicts remaining useful performance (RUP) of analog circuits' single components. Since calculation about the FI feature set is more reasonable, accuracy of prediction is improved to some extent. Finally, the foregoing conclusions are verified by experiments. PMID:25147853

  4. Remembering Places in Space: A Human Analog Study of the Morris Water Maze

    NASA Astrophysics Data System (ADS)

    Fitting, Sylvia; Allen, Gary L.; Wedell, Douglas H.

    We conducted a human analog study of the Morris Water Maze, with individuals indicating a remembered location in a 3 m diameter arena over different intervals of time and with different memory loads. The primary focus of the study was to test a theory of how varying cue location and number of cues affects memory for spatial location. As expected, memory performance, as measured by proximity to the actual location, was negatively affected by increasing memory load, increasing delay interval, and decreasing the number of cues. As memory performance decremented, bias effects increased and were in accordance with the cue-based memory model described by Fitting, Wedell and Allen (2005). Specifically, remembered locations were biased toward the nearest cue and error decreased with more cues. These results demonstrate that localization processes that apply to small two-dimensional task fields may generalize to a larger traversable task field.

  5. Acetyl analogs of combretastatin A-4: synthesis and biological studies.

    PubMed

    Babu, Balaji; Lee, Megan; Lee, Lauren; Strobel, Raymond; Brockway, Olivia; Nickols, Alexis; Sjoholm, Robert; Tzou, Samuel; Chavda, Sameer; Desta, Dereje; Fraley, Gregory; Siegfried, Adam; Pennington, William; Hartley, Rachel M; Westbrook, Cara; Mooberry, Susan L; Kiakos, Konstantinos; Hartley, John A; Lee, Moses

    2011-04-01

    The combretastatins have received significant attention because of their simple chemical structures, excellent antitumor efficacy and novel antivascular mechanisms of action. Herein, we report the synthesis of 20 novel acetyl analogs of CA-4 (1), synthesized from 3,4,5-trimethoxyphenylacetone that comprises the A ring of CA-4 with different aromatic aldehydes as the B ring. Molecular modeling studies indicate that these new compounds possess a 'twisted' conformation similar to CA-4. The new analogs effectively inhibit the growth of human and murine cancer cells. The most potent compounds 6k, 6s and 6t, have IC(50) values in the sub-μM range. Analog 6t has an IC(50) of 182 nM in MDA-MB-435 cells and has advantages over earlier analogs due to its enhanced water solubility (456 μM). This compound initiates microtubule depolymerization with an EC(50) value of 1.8 μM in A-10 cells. In a murine L1210 syngeneic tumor model 6t had antitumor activity and no apparent toxicity. Copyright © 2011 Elsevier Ltd. All rights reserved.

  6. An Analog Earth Climate Model

    NASA Astrophysics Data System (ADS)

    Varekamp, J. C.

    2010-12-01

    The earth climate is broadly governed by the radiative power of the sun as well as the heat retention and convective cooling of the atmosphere. I have constructed an analog earth model for an undergraduate climate class that simulates mean climate using these three parameters. The ‘earth’ is a hollow, black, bronze sphere (4 cm diameter) mounted on a thin insulated rod, and illuminated by two opposite optic fibers, with light focused on the sphere by a set of lenses. The sphere is encased in a large double-walled aluminum cylinder (34 cm diameter by 26 cm high) with separate water cooling jackets at the top, bottom, and sides. The cylinder can be filled with a gas of choice at a variety of pressures or can be run in vacuum. The exterior is cladded with insulation, and the temperature of the sphere, atmosphere and walls is monitored with thermocouples. The temperature and waterflow of the three cooling jackets can be monitored to establish the energy output of the whole system; the energy input is the energy yield of the two optic fibers. A small IR transmissive lens at the top provides the opportunity to hook up the fiber of a hyper spectrometer to monitor the emission spectrum of the black ‘earth’ sphere. A pressure gauge and gas inlet-outlet system for flushing of the cell completes it. The heat yield of the cooling water at the top is the sum of the radiative and convective components, whereas the bottom jacket only carries off the radiative heat of the sphere. Undergraduate E&ES students at Wesleyan University have run experiments with dry air, pure CO2, N2 and Ar at 1 atmosphere, and a low vacuum run was accomplished to calibrate the energy input. For each experiment, the lights are flipped on, the temperature acquisition routine is activated, and the sphere starts to warm up until an equilibrium temperature has been reached. The lights are then flipped off and the cooling sequence towards ambient is registered. The energy input is constant for a given

  7. Modeling visual problem solving as analogical reasoning.

    PubMed

    Lovett, Andrew; Forbus, Kenneth

    2017-01-01

    We present a computational model of visual problem solving, designed to solve problems from the Raven's Progressive Matrices intelligence test. The model builds on the claim that analogical reasoning lies at the heart of visual problem solving, and intelligence more broadly. Images are compared via structure mapping, aligning the common relational structure in 2 images to identify commonalities and differences. These commonalities or differences can themselves be reified and used as the input for future comparisons. When images fail to align, the model dynamically rerepresents them to facilitate the comparison. In our analysis, we find that the model matches adult human performance on the Standard Progressive Matrices test, and that problems which are difficult for the model are also difficult for people. Furthermore, we show that model operations involving abstraction and rerepresentation are particularly difficult for people, suggesting that these operations may be critical for performing visual problem solving, and reasoning more generally, at the highest level. (PsycINFO Database Record (c) 2016 APA, all rights reserved).

  8. The enhancement of mathematical analogical reasoning ability of university students through concept attainment model

    NASA Astrophysics Data System (ADS)

    Angraini, L. M.; Kusumah, Y. S.; Dahlan, J. A.

    2018-05-01

    This study aims to see the enhancement of mathematical analogical reasoning ability of the university students through concept attainment model learning based on overall and Prior Mathematical Knowledge (PMK) and interaction of both. Quasi experiments with the design of this experimental-controlled equivalent group involved 54 of second semester students at the one of State Islamic University. The instrument used is pretest-postest. Kolmogorov-Smirnov test, Levene test, t test, two-way ANOVA test were used to analyse the data. The result of this study includes: (1) The enhancement of the mathematical analogical reasoning ability of the students who gets the learning of concept attainment model is better than the enhancement of the mathematical analogical reasoning ability of the students who gets the conventional learning as a whole and based on PMK; (2) There is no interaction between the learning that is used and PMK on enhancing mathematical analogical reasoning ability.

  9. Utah Marbles and Mars Blueberries: Comparitive Terrestrial Analogs for Hematite Concretions on Mars

    NASA Astrophysics Data System (ADS)

    Chan, M. A.; Beitler, B.; Parry, W. T.; Ormö, J.; Komatsu, G.

    2005-03-01

    Compelling comparisons show why Utah iron oxide-cemented "marbles" are a good analog for Mars hematite "blueberries". Terrestrial examples offer valuable models for interpreting the diagenetic history and importance of water on Mars.

  10. Estimation of lake water - groundwater interactions in meromictic mining lakes by modelling isotope signatures of lake water.

    PubMed

    Seebach, Anne; Dietz, Severine; Lessmann, Dieter; Knoeller, Kay

    2008-03-01

    A method is presented to assess lake water-groundwater interactions by modelling isotope signatures of lake water using meteorological parameters and field data. The modelling of delta(18)O and deltaD variations offers information about the groundwater influx into a meromictic Lusatian mining lake. Therefore, a water balance model is combined with an isotope water balance model to estimate analogies between simulated and measured isotope signatures within the lake water body. The model is operated with different evaporation rates to predict delta(18)O and deltaD values in a lake that is only controlled by weather conditions with neither groundwater inflow nor outflow. Comparisons between modelled and measured isotope values show whether the lake is fed by the groundwater or not. Furthermore, our investigations show that an adaptation of the Craig and Gordon model [H. Craig, L.I. Gordon. Deuterium and oxygen-18 variations in the ocean and the marine atmosphere. In Stable Isotopes in Oceanographic Studies and Paleotemperature, Spoleto, E. Tongiorgi (Ed.), pp. 9-130, Consiglio Nazionale delle Ricerche, Laboratorio di Geologia Nucleare, Pisa (1965).] to specific conditions in temperate regions seems necessary.

  11. Salt-sparing diuretic action of a water-soluble urea analog inhibitor of urea transporters UT-A and UT-B in rats

    PubMed Central

    Cil, Onur; Esteva-Font, Cristina; Tas, Sadik Taskin; Su, Tao; Lee, Sujin; Anderson, Marc O.; Ertunc, Mert; Verkman, A. S.

    2015-01-01

    Inhibitors of kidney urea transporter (UT) proteins have potential use as salt-sparing diuretics (‘urearetics’) with a different mechanism of action than diuretics that target salt transporters. To study UT inhibition in rats, we screened about 10,000 drugs, natural products and urea analogs for inhibition of rat UT-A1. Drug and natural product screening found nicotine, sanguinarine and an indolcarbonylchromenone with IC50 of 10–20 μM. Urea analog screening found methylacetamide and dimethylthiourea (DMTU). DMTU fully and reversibly inhibited rat UT-A1 and UT-B by a noncompetitive mechanism with IC50 of 2–3 mM. Homology modeling and docking computations suggested DMTU binding sites on rat UT-A1. Following a single intraperitoneal injection of 500 mg/kg DMTU, peak plasma concentration was 9 mM with t1/2 of about 10 hours, and a urine concentration of 20–40 mM. Rats chronically treated with DMTU had a sustained, reversible reduction in urine osmolality from 1800 to 600 mOsm, a 3-fold increase in urine output, and mild hypokalemia. DMTU did not impair urinary concentrating function in rats on a low protein diet. Compared to furosemide-treated rats, the DMTU-treated rats had greater diuresis and reduced urinary salt loss. In a model of Syndrome of Inappropriate Antidiuretic Hormone secretion, DMTU treatment prevented hyponatremia and water retention produced by water-loading in dDAVP-treated rats. Thus, our results establish a rat model of UT inhibition and demonstrate the diuretic efficacy of UT inhibition. PMID:25993324

  12. Salt-sparing diuretic action of a water-soluble urea analog inhibitor of urea transporters UT-A and UT-B in rats.

    PubMed

    Cil, Onur; Esteva-Font, Cristina; Tas, Sadik Taskin; Su, Tao; Lee, Sujin; Anderson, Marc O; Ertunc, Mert; Verkman, Alan S

    2015-08-01

    Inhibitors of kidney urea transporter (UT) proteins have potential use as salt-sparing diuretics ('urearetics') with a different mechanism of action than diuretics that target salt transporters. To study UT inhibition in rats, we screened about 10,000 drugs, natural products and urea analogs for inhibition of rat UT-A1. Drug and natural product screening found nicotine, sanguinarine and an indolcarbonylchromenone with IC50 of 10-20 μM. Urea analog screening found methylacetamide and dimethylthiourea (DMTU). DMTU fully and reversibly inhibited rat UT-A1 and UT-B by a noncompetitive mechanism with IC50 of 2-3 mM. Homology modeling and docking computations suggested DMTU binding sites on rat UT-A1. Following a single intraperitoneal injection of 500 mg/kg DMTU, peak plasma concentration was 9 mM with t1/2 of about 10 h, and a urine concentration of 20-40 mM. Rats chronically treated with DMTU had a sustained, reversible reduction in urine osmolality from 1800 to 600 mOsm, a 3-fold increase in urine output, and mild hypokalemia. DMTU did not impair urinary concentrating function in rats on a low protein diet. Compared to furosemide-treated rats, the DMTU-treated rats had greater diuresis and reduced urinary salt loss. In a model of syndrome of inappropriate antidiuretic hormone secretion, DMTU treatment prevented hyponatremia and water retention produced by water-loading in dDAVP-treated rats. Thus, our results establish a rat model of UT inhibition and demonstrate the diuretic efficacy of UT inhibition.

  13. Analog-Based Postprocessing of Navigation-Related Hydrological Ensemble Forecasts

    NASA Astrophysics Data System (ADS)

    Hemri, S.; Klein, B.

    2017-11-01

    Inland waterway transport benefits from probabilistic forecasts of water levels as they allow to optimize the ship load and, hence, to minimize the transport costs. Probabilistic state-of-the-art hydrologic ensemble forecasts inherit biases and dispersion errors from the atmospheric ensemble forecasts they are driven with. The use of statistical postprocessing techniques like ensemble model output statistics (EMOS) allows for a reduction of these systematic errors by fitting a statistical model based on training data. In this study, training periods for EMOS are selected based on forecast analogs, i.e., historical forecasts that are similar to the forecast to be verified. Due to the strong autocorrelation of water levels, forecast analogs have to be selected based on entire forecast hydrographs in order to guarantee similar hydrograph shapes. Custom-tailored measures of similarity for forecast hydrographs comprise hydrological series distance (SD), the hydrological matching algorithm (HMA), and dynamic time warping (DTW). Verification against observations reveals that EMOS forecasts for water level at three gauges along the river Rhine with training periods selected based on SD, HMA, and DTW compare favorably with reference EMOS forecasts, which are based on either seasonal training periods or on training periods obtained by dividing the hydrological forecast trajectories into runoff regimes.

  14. A Budyko-type Model for Human Water Consumption

    NASA Astrophysics Data System (ADS)

    Lei, X.; Zhao, J.; Wang, D.; Sivapalan, M.

    2017-12-01

    With the expansion of human water footprint, water crisis is no longer only a conflict or competition for water between different economic sectors, but also increasingly between human and the environment. In order to describe the emergent dynamics and patterns of the interaction, a theoretical framework that encapsulates the physical and societal controls impacting human water consumption is needed. In traditional hydrology, Budyko-type models are simple but efficient descriptions of vegetation-mediated hydrologic cycle in catchments, i.e., the partitioning of mean annual precipitation into runoff and evapotranspiration. Plant water consumption plays a crucial role in the process. Hypothesized similarities between human-water and vegetation-water interactions, including water demand, constraints and system functioning, give the idea of corresponding Budyko-type framework for human water consumption at the catchment scale. Analogous to variables of Budyko-type models for hydrologic cycle, water demand, water consumption, environmental water use and available water are corresponding to potential evaporation, actual evaporation, runoff and precipitation respectively. Human water consumption data, economic and hydro-meteorological data for 51 human-impacted catchments and 10 major river basins in China are assembled to look for the existence of a Budyko-type relationship for human water consumption, and to seek explanations for the spread in the observed relationship. Guided by this, a Budyko-type analytical model is derived based on application of an optimality principle, that of maximum water benefit. The model derived has the same functional form and mathematical features as those that apply for the original Budyko model. Parameters of the new Budyko-type model for human consumption are linked to economic and social factors. The results of this paper suggest that the functioning of both social and hydrologic subsystems within catchment systems can be explored within

  15. A multi criteria analog model for assessing the vulnerability of rural catchments to road spills of hazardous substances

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Siqueira, Hygor Evangelista; Pissarra, Teresa Cristina Tarlé; Farias do Valle Junior, Renato

    Protection Area (APA), located in the Uberaba region, state of Minas Gerais, Brazil. In this region, the risk of accidents causing chemical spills is preoccupying because large quantities of dangerous materials are transported in two important distribution highways while the APA is fundamental for the protection of water resources, the riverine ecosystems and remnants of native vegetation. In some tested scenarios, model results show 60% of vulnerable areas within the studied area. The most sensitive parameter to vulnerability is soil type. To prevent soils from contamination, specific measures were proposed involving minimization of land use conflicts that would presumably raise the soil's organic matter and in the sequel restore the soil's structural functions. Additionally, the present study proposed the preservation and reinforcement of riparian forests as one measure to protect the quality of surface water. - Highlights: • A multi criteria analog model was developed to assess rural catchment vulnerability along roads. • Model parameters were defined by analogy with urban wash-off equations and routing algorithms. • The model mixes up various biophysical and socio-economic parameters. • Model application was based on a scenario analysis. • The study is focused on the Environmental Protection Area of Uberaba River, Brazil.« less

  16. The emergence of understanding in a computer model of concepts and analogy-making

    NASA Astrophysics Data System (ADS)

    Mitchell, Melanie; Hofstadter, Douglas R.

    1990-06-01

    This paper describes Copycat, a computer model of the mental mechanisms underlying the fluidity and adaptability of the human conceptual system in the context of analogy-making. Copycat creates analogies between idealized situations in a microworld that has been designed to capture and isolate many of the central issues of analogy-making. In Copycat, an understanding of the essence of a situation and the recognition of deep similarity between two superficially different situations emerge from the interaction of a large number of perceptual agents with an associative, overlapping, and context-sensitive network of concepts. Central features of the model are: a high degree of parallelism; competition and cooperation among a large number of small, locally acting agents that together create a global understanding of the situation at hand; and a computational temperature that measures the amount of perceptual organization as processing proceeds and that in turn controls the degree of randomness with which decisions are made in the system.

  17. A generalized analog implementation of piecewise linear neuron models using CCII building blocks.

    PubMed

    Soleimani, Hamid; Ahmadi, Arash; Bavandpour, Mohammad; Sharifipoor, Ozra

    2014-03-01

    This paper presents a set of reconfigurable analog implementations of piecewise linear spiking neuron models using second generation current conveyor (CCII) building blocks. With the same topology and circuit elements, without W/L modification which is impossible after circuit fabrication, these circuits can produce different behaviors, similar to the biological neurons, both for a single neuron as well as a network of neurons just by tuning reference current and voltage sources. The models are investigated, in terms of analog implementation feasibility and costs, targeting large scale hardware implementations. Results show that, in order to gain the best performance, area and accuracy; these models can be compromised. Simulation results are presented for different neuron behaviors with CMOS 350 nm technology. Copyright © 2013 Elsevier Ltd. All rights reserved.

  18. UV IRRADIATION OF AROMATIC NITROGEN HETEROCYCLES IN INTERSTELLAR ICE ANALOGS

    NASA Technical Reports Server (NTRS)

    Elsila, J. E.; Bernstein, M. P.; Sanford, S. A.

    2005-01-01

    Here, we present information on the properties of the ANH quinoline frozen in interstellar water-ice analogs. Quinoline is a two-ring compound structurally analogous to the PAH naphthalene. In this work, binary mixtures of water and quinoline were frozen to create interstellar ice analogs, which were then subjected to ultraviolet photolysis. We will present the infrared spectra of the resulting ices at various temperatures, as well as chromatographic analysis of the residues remaining upon warm-up of these ices to room temperature.

  19. An Effective Model to Increase Student Attitude and Achievement: Narrative Including Analogies

    ERIC Educational Resources Information Center

    Akkuzu, Nalan; Akcay, Husamettin

    2011-01-01

    This study describes the analogical models and narratives used to introduce and teach Grade 9 chemical covalent compounds which are relatively abstract and difficult for students. We explained each model's development during the lessons and analyzed understanding students derived from these learning materials. In this context, achievement,…

  20. Analytical modeling of soliton interactions in a nonlocal nonlinear medium analogous to gravitational force

    NASA Astrophysics Data System (ADS)

    Zeng, Shihao; Chen, Manna; Zhang, Ting; Hu, Wei; Guo, Qi; Lu, Daquan

    2018-01-01

    We illuminate an analytical model of soliton interactions in lead glass by analogizing to a gravitational force system. The orbits of spiraling solitons under a long-range interaction are given explicitly and demonstrated to follow Newton's second law of motion and the Binet equation by numerical simulations. The condition for circular orbits is obtained and the oscillating orbits are proved not to be closed. We prove the analogy between the nonlocal nonlinear optical system and gravitational system and specify the quantitative relation of the quantity between the two models.

  1. Synthetic Analogs of Phospholipid Metabolites as Antimalarials.

    DTIC Science & Technology

    1979-07-01

    phosphatidic acid analogs containing ether and phosphonate groups; completely non-hydrolyzable lecithin analogs containing phosphinate and ether groups...The phosphatidic acid and lecithin target compounds were successfully synthesized and submitted, together with a number of intermediates. A model of a... Phosphatidic acid analogs ......................... 5 Z.Z Lecithin Analogs .................................. 6 2.3 Analogs of Cytidine Diphosphate

  2. Analog model for quantum gravity effects: phonons in random fluids.

    PubMed

    Krein, G; Menezes, G; Svaiter, N F

    2010-09-24

    We describe an analog model for quantum gravity effects in condensed matter physics. The situation discussed is that of phonons propagating in a fluid with a random velocity wave equation. We consider that there are random fluctuations in the reciprocal of the bulk modulus of the system and study free phonons in the presence of Gaussian colored noise with zero mean. We show that, in this model, after performing the random averages over the noise function a free conventional scalar quantum field theory describing free phonons becomes a self-interacting model.

  3. Analogies to Demonstrate the Effect of Roughness on Surface Wettability

    ERIC Educational Resources Information Center

    Yolcu, Hasan

    2017-01-01

    This article presents an analogy to illustrate the effect of surface roughness on surface wettability. I used a water-filled balloon to represent water droplet, a toothpick to represent surface roughness and Styrofoam as the surface. The analogies presented in this article will help visualize how roughness affects the wettability of the surface…

  4. Exploring the Use of Multiple Analogical Models when Teaching and Learning Chemical Equilibrium

    ERIC Educational Resources Information Center

    Harrison, Allan G.; De Jong, Onno

    2005-01-01

    This study describes the multiple analogical models used to introduce and teach Grade 12 chemical equilibrium. We examine the teacher's reasons for using models, explain each model's development during the lessons, and analyze the understandings students derived from the models. A case study approach was used and the data were drawn from the…

  5. Towards a Comprehensive Model of Jet Noise Using an Acoustic Analogy and Steady RANS Solutions

    NASA Technical Reports Server (NTRS)

    Miller, Steven A. E.

    2013-01-01

    An acoustic analogy is developed to predict the noise from jet flows. It contains two source models that independently predict the noise from turbulence and shock wave shear layer interactions. The acoustic analogy is based on the Euler equations and separates the sources from propagation. Propagation effects are taken into account by calculating the vector Green's function of the linearized Euler equations. The sources are modeled following the work of Tam and Auriault, Morris and Boluriaan, and Morris and Miller. A statistical model of the two-point cross-correlation of the velocity fluctuations is used to describe the turbulence. The acoustic analogy attempts to take into account the correct scaling of the sources for a wide range of nozzle pressure and temperature ratios. It does not make assumptions regarding fine- or large-scale turbulent noise sources, self- or shear-noise, or convective amplification. The acoustic analogy is partially informed by three-dimensional steady Reynolds-Averaged Navier-Stokes solutions that include the nozzle geometry. The predictions are compared with experiments of jets operating subsonically through supersonically and at unheated and heated temperatures. Predictions generally capture the scaling of both mixing noise and BBSAN for the conditions examined, but some discrepancies remain that are due to the accuracy of the steady RANS turbulence model closure, the equivalent sources, and the use of a simplified vector Green's function solver of the linearized Euler equations.

  6. Future evolution in a backreaction model and the analogous scalar field cosmology

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ali, Amna; Majumdar, A.S., E-mail: amnaalig@gmail.com, E-mail: archan@bose.res.in

    We investigate the future evolution of the universe using the Buchert framework for averaged backreaction in the context of a two-domain partition of the universe. We show that this approach allows for the possibility of the global acceleration vanishing at a finite future time, provided that none of the subdomains accelerate individually. The model at large scales is analogously described in terms of a homogeneous scalar field emerging with a potential that is fixed and free from phenomenological parametrization. The dynamics of this scalar field is explored in the analogous FLRW cosmology. We use observational data from Type Ia Supernovae,more » Baryon Acoustic Oscillations, and Cosmic Microwave Background to constrain the parameters of the model for a viable cosmology, providing the corresponding likelihood contours.« less

  7. Relating Derived Relations as a Model of Analogical Reasoning: Reaction Times and Event-Related Potentials

    PubMed Central

    Barnes-Holmes, Dermot; Regan, Donal; Barnes-Holmes, Yvonne; Commins, Sean; Walsh, Derek; Stewart, Ian; Smeets, Paul M; Whelan, Robert; Dymond, Simon

    2005-01-01

    The current study aimed to test a Relational Frame Theory (RFT) model of analogical reasoning based on the relating of derived same and derived difference relations. Experiment 1 recorded reaction time measures of similar–similar (e.g., “apple is to orange as dog is to cat”) versus different–different (e.g., “he is to his brother as chalk is to cheese”) derived relational responding, in both speed-contingent and speed-noncontingent conditions. Experiment 2 examined the event-related potentials (ERPs) associated with these two response patterns. Both experiments showed similar–similar responding to be significantly faster than different–different responding. Experiment 2 revealed significant differences between the waveforms of the two response patterns in the left-hemispheric prefrontal regions; different–different waveforms were significantly more negative than similar–similar waveforms. The behavioral and neurophysiological data support the RFT prediction that, all things being equal, similar–similar responding is relationally “simpler” than, and functionally distinct from, different–different analogical responding. The ERP data were fully consistent with findings in the neurocognitive literature on analogy. These findings strengthen the validity of the RFT model of analogical reasoning and supplement the behavior-analytic approach to analogy based on the relating of derived relations. PMID:16596974

  8. Genomics Analogy Model for Educators (GAME): From Jumping Genes to Alternative Splicing

    ERIC Educational Resources Information Center

    Corn, Joanie; Pittendrigh, Barry R.; Orvis, Kathryn S.

    2004-01-01

    Studies have shown that there is usually a lack of understanding concerning the fields of genetics and genomics among high school students (Lewis and Wood-Robinson, 2000). A recent article (Kirkpatrick et al, 2002) introduced the GAME (Genomics Analogy Model for Educators) model and two of its components: (1) explaining sequencing technology with…

  9. DAT/SERT Selectivity of Flexible GBR 12909 Analogs Modeled Using 3D-QSAR Methods

    PubMed Central

    Gilbert, Kathleen M.; Boos, Terrence L.; Dersch, Christina M.; Greiner, Elisabeth; Jacobson, Arthur E.; Lewis, David; Matecka, Dorota; Prisinzano, Thomas E.; Zhang, Ying; Rothman, Richard B.; Rice, Kenner C.; Venanzi, Carol A.

    2007-01-01

    The dopamine reuptake inhibitor GBR 12909 (1-{2-[bis(4-fluorophenyl)methoxy]ethyl}-4-(3-phenylpropyl)piperazine, 1) and its analogs have been developed as tools to test the hypothesis that selective dopamine transporter (DAT) inhibitors will be useful therapeutics for cocaine addiction. This 3D-QSAR study focuses on the effect of substitutions in the phenylpropyl region of 1. CoMFA and CoMSIA techniques were used to determine a predictive and stable model for the DAT/serotonin transporter (SERT) selectivity (represented by pKi (DAT/SERT)) of a set of flexible analogs of 1, most of which have eight rotatable bonds. In the absence of a rigid analog to use as a 3D-QSAR template, six conformational families of analogs were constructed from six pairs of piperazine and piperidine template conformers identified by hierarchical clustering as representative molecular conformations. Three models stable to y-value scrambling were identified after a comprehensive CoMFA and CoMSIA survey with Region Focusing. Test set correlation validation led to an acceptable model, with q2 = 0.508, standard error of prediction = 0.601, two components, r2 = 0.685, standard error of estimate = 0.481, F value = 39, percent steric contribution = 65, and percent electrostatic contribution = 35. A CoMFA contour map identified areas of the molecule that affect pKi (DAT/SERT). This work outlines a protocol for deriving a stable and predictive model of the biological activity of a set of very flexible molecules. PMID:17127069

  10. NaturAnalogs for the Unsaturated Zone

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    A. Simmons; A. Unger; M. Murrell

    2000-03-08

    The purpose of this Analysis/Model Report (AMR) is to document natural and anthropogenic (human-induced) analog sites and processes that are applicable to flow and transport processes expected to occur at the potential Yucca Mountain repository in order to build increased confidence in modeling processes of Unsaturated Zone (UZ) flow and transport. This AMR was prepared in accordance with ''AMR Development Plan for U0135, Natural Analogs for the UZ'' (CRWMS 1999a). Knowledge from analog sites and processes is used as corroborating information to test and build confidence in flow and transport models of Yucca Mountain, Nevada. This AMR supports the Unsaturatedmore » Zone (UZ) Flow and Transport Process Model Report (PMR) and the Yucca Mountain Site Description. The objectives of this AMR are to test and build confidence in the representation of UZ processes in numerical models utilized in the UZ Flow and Transport Model. This is accomplished by: (1) applying data from Boxy Canyon, Idaho in simulations of UZ flow using the same methodologies incorporated in the Yucca Mountain UZ Flow and Transport Model to assess the fracture-matrix interaction conceptual model; (2) Providing a preliminary basis for analysis of radionuclide transport at Pena Blanca, Mexico as an analog of radionuclide transport at Yucca Mountain; and (3) Synthesizing existing information from natural analog studies to provide corroborating evidence for representation of ambient and thermally coupled UZ flow and transport processes in the UZ Model.« less

  11. Subcritical water extraction of amino acids from Mars analog soils.

    PubMed

    Noell, Aaron C; Fisher, Anita M; Fors-Francis, Kisa; Sherrit, Stewart

    2018-01-18

    For decades, the Martian regolith has stymied robotic mission efforts to catalog the organic molecules present. Perchlorate salts, found widely throughout Mars, are the main culprit as they breakdown and react with organics liberated from the regolith during pyrolysis, the primary extraction technique attempted to date on Mars. This work further develops subcritical water extraction (SCWE) as a technique for extraction of amino acids on future missions. The effect of SCWE temperature (185, 200, and 215°C) and duration of extraction (10-120 min) on the total amount and distribution of amino acids recovered was explored for three Mars analog soils (JSC Mars-1A simulant, an Atacama desert soil, and an Antarctic Dry Valleys soil) and bovine serum albumin (as a control solution of known amino acid content). Total amounts of amino acids extracted increased with both time and temperature; however, the distribution shifted notably due to the destruction of the amino acids with charged or polar side chains at the higher temperatures. The pure bovine serum albumin solution and JSC Mars 1A also showed lower yields than the Atacama and Antarctic extractions suggesting that SCWE may be less effective at hydrolyzing large or aggregated proteins. Changing solvent from water to a dilute (10 mM) HCl solution allowed total extraction efficiencies comparable to the higher temperature/time combinations while using the lowest temperature/time (185°C/20 min). The dilute HCl extractions also did not lead to the shift in amino acid distribution observed at the higher temperatures. Additionally, adding sodium perchlorate salt to the extraction did not interfere with recoveries. Native magnetite in the JSC Mars-1A may have been responsible for destruction of glycine, as evidenced by its uncharacteristic decrease as the temperature/time of extraction increased. This work shows that SCWE can extract high yields of native amino acids out of Mars analog soils with minimal disruption of the

  12. Development of a New Analog Test System Capable of Modeling Tectonic Deformation Incorporating the Effects of Pore Fluid Pressure

    NASA Astrophysics Data System (ADS)

    Zhang, M.; Nakajima, H.; Takeda, M.; Aung, T. T.

    2005-12-01

    deep geological disposal concept, besides containing the wastes with engineering methods such as the glassification of the radioactive wastes, the geological formation itself is expected to serve as a natural barrier that retards migration of radionuclides. To evaluate the long-term safety of deep geological disposal, a better understanding of the fate and transport of radionuclides in a geologically heterogeneous environment is necessary. To meet such requirements, a new analog test sandbox model system was developed. This model system allows the pore fluid flows to be controlled during the model tests and permits the study of flow and transport phenomena in the deformed heterogeneous model. One- or two-dimensional fluid flow is controlled using a side-wall piston. Deformation processes can be observed through a transparent front panel, and pore fluid movement can be also visualized using a color tracer. In this study, the scaling requirements for analog modeling, including pore water pressure, are discussed based on the theory of dimensional analysis, supplemented by data from a series of laboratory shear tests, and a detailed description of the model system. Preliminary experimental results are presented.

  13. The Robustness of Acoustic Analogies

    NASA Technical Reports Server (NTRS)

    Freund, J. B.; Lele, S. K.; Wei, M.

    2004-01-01

    Acoustic analogies for the prediction of flow noise are exact rearrangements of the flow equations N(right arrow q) = 0 into a nominal sound source S(right arrow q) and sound propagation operator L such that L(right arrow q) = S(right arrow q). In practice, the sound source is typically modeled and the propagation operator inverted to make predictions. Since the rearrangement is exact, any sufficiently accurate model of the source will yield the correct sound, so other factors must determine the merits of any particular formulation. Using data from a two-dimensional mixing layer direct numerical simulation (DNS), we evaluate the robustness of two analogy formulations to different errors intentionally introduced into the source. The motivation is that since S can not be perfectly modeled, analogies that are less sensitive to errors in S are preferable. Our assessment is made within the framework of Goldstein's generalized acoustic analogy, in which different choices of a base flow used in constructing L give different sources S and thus different analogies. A uniform base flow yields a Lighthill-like analogy, which we evaluate against a formulation in which the base flow is the actual mean flow of the DNS. The more complex mean flow formulation is found to be significantly more robust to errors in the energetic turbulent fluctuations, but its advantage is less pronounced when errors are made in the smaller scales.

  14. Analog current mode analog/digital converter

    NASA Technical Reports Server (NTRS)

    Hadidi, Khayrollah (Inventor)

    1996-01-01

    An improved subranging or comparator circuit is provided for an analog-to-digital converter. As a subranging circuit, the circuit produces a residual signal representing the difference between an analog input signal and an analog of a digital representation. This is achieved by subdividing the digital representation into two or more parts and subtracting from the analog input signal analogs of each of the individual digital portions. In another aspect of the present invention, the subranging circuit comprises two sets of differential input pairs in which the transconductance of one differential input pair is scaled relative to the transconductance of the other differential input pair. As a consequence, the same resistor string may be used for two different digital-to-analog converters of the subranging circuit.

  15. An adaptive two-stage analog/regression model for probabilistic prediction of small-scale precipitation in France

    NASA Astrophysics Data System (ADS)

    Chardon, Jérémy; Hingray, Benoit; Favre, Anne-Catherine

    2018-01-01

    Statistical downscaling models (SDMs) are often used to produce local weather scenarios from large-scale atmospheric information. SDMs include transfer functions which are based on a statistical link identified from observations between local weather and a set of large-scale predictors. As physical processes driving surface weather vary in time, the most relevant predictors and the regression link are likely to vary in time too. This is well known for precipitation for instance and the link is thus often estimated after some seasonal stratification of the data. In this study, we present a two-stage analog/regression model where the regression link is estimated from atmospheric analogs of the current prediction day. Atmospheric analogs are identified from fields of geopotential heights at 1000 and 500 hPa. For the regression stage, two generalized linear models are further used to model the probability of precipitation occurrence and the distribution of non-zero precipitation amounts, respectively. The two-stage model is evaluated for the probabilistic prediction of small-scale precipitation over France. It noticeably improves the skill of the prediction for both precipitation occurrence and amount. As the analog days vary from one prediction day to another, the atmospheric predictors selected in the regression stage and the value of the corresponding regression coefficients can vary from one prediction day to another. The model allows thus for a day-to-day adaptive and tailored downscaling. It can also reveal specific predictors for peculiar and non-frequent weather configurations.

  16. Strigolactone analogs derived from ketones using a working model for germination stimulants as a blueprint.

    PubMed

    Mwakaboko, Alinanuswe S; Zwanenburg, Binne

    2011-04-01

    Strigolactones are important signaling compounds in the plant kingdom. Here we focus on their germination stimulatory effect on seeds of the parasitic weeds Striga and Orobanche spp. and more particularly on the design and synthesis of new active strigolactone analogs derived from simple cyclic ketones. New analogs derived from 1-indanone, 1-tetralone, cyclopentanone, cyclohexanone and a series of substituted cyclohexanones (including carvone and pulegone) are prepared by formylation of the ketones with ethyl formate followed by coupling with a halo butenolide. Both enantiomers of the analog derived from 1-tetralone have been prepared by employing a homochiral synthon for the coupling reaction. For three other strigolactone analogs the antipodes have been obtained by chromatography on a chiral column. All analogs have an appreciable germinating activity towards seeds of Striga hermomonthica and Orobanche crenata and O. cernua. Stereoisomers having the same configuration at the D-ring as in naturally occurring strigol have a higher stimulatory effect than the corresponding antipodes. The analogs obtained from 1-indanone and 1-tetralone have an activity comparable with that of the well known stimulant GR 24. Analogs derived from 2-phenyl-cylohexanone, carvone and pulegone also have a good germinating response. The results show that the working model for designing new bioactive strigolactones is applicable.

  17. Role of natural analogs in performance assessment of nuclear waste repositories

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sagar, B.; Wittmeyer, G.W.

    1995-09-01

    Mathematical models of the flow of water and transport of radionuclides in porous media will be used to assess the ability of deep geologic repositories to safely contain nuclear waste. These models must, in some sense, be validated to ensure that they adequately describe the physical processes occurring within the repository and its geologic setting. Inasmuch as the spatial and temporal scales over which these models must be applied in performance assessment are very large, validation of these models against laboratory and small-scale field experiments may be considered inadequate. Natural analogs may provide validation data that are representative of physico-chemicalmore » processes that occur over spatial and temporal scales as large or larger than those relevant to repository design. The authors discuss the manner in which natural analog data may be used to increase confidence in performance assessment models and conclude that, while these data may be suitable for testing the basic laws governing flow and transport, there is insufficient control of boundary and initial conditions and forcing functions to permit quantitative validation of complex, spatially distributed flow and transport models. The authors also express their opinion that, for collecting adequate data from natural analogs, resources will have to be devoted to them that are much larger than are devoted to them at present.« less

  18. Analogs of methyllycaconitine as novel noncompetitive inhibitors of nicotinic receptors: pharmacological characterization, computational modeling, and pharmacophore development.

    PubMed

    McKay, Dennis B; Chang, Cheng; González-Cestari, Tatiana F; McKay, Susan B; El-Hajj, Raed A; Bryant, Darrell L; Zhu, Michael X; Swaan, Peter W; Arason, Kristjan M; Pulipaka, Aravinda B; Orac, Crina M; Bergmeier, Stephen C

    2007-05-01

    As a novel approach to drug discovery involving neuronal nicotinic acetylcholine receptors (nAChRs), our laboratory targeted nonagonist binding sites (i.e., noncompetitive binding sites, negative allosteric binding sites) located on nAChRs. Cultured bovine adrenal cells were used as neuronal models to investigate interactions of 67 analogs of methyllycaconitine (MLA) on native alpha3beta4* nAChRs. The availability of large numbers of structurally related molecules presents a unique opportunity for the development of pharmacophore models for noncompetitive binding sites. Our MLA analogs inhibited nicotine-mediated functional activation of both native and recombinant alpha3beta4* nAChRs with a wide range of IC(50) values (0.9-115 microM). These analogs had little or no inhibitory effects on agonist binding to native or recombinant nAChRs, supporting noncompetitive inhibitory activity. Based on these data, two highly predictive 3D quantitative structure-activity relationship (comparative molecular field analysis and comparative molecular similarity index analysis) models were generated. These computational models were successfully validated and provided insights into the molecular interactions of MLA analogs with nAChRs. In addition, a pharmacophore model was constructed to analyze and visualize the binding requirements to the analog binding site. The pharmacophore model was subsequently applied to search structurally diverse molecular databases to prospectively identify novel inhibitors. The rapid identification of eight molecules from database mining and our successful demonstration of in vitro inhibitory activity support the utility of these computational models as novel tools for the efficient retrieval of inhibitors. These results demonstrate the effectiveness of computational modeling and pharmacophore development, which may lead to the identification of new therapeutic drugs that target novel sites on nAChRs.

  19. Feasibility Study of a Lunar Analog Bed Rest Model

    NASA Technical Reports Server (NTRS)

    Cromwell, Ronita L.; Platts, Steven H.; Yarbough, Patrice; Buccello-Stout, Regina

    2010-01-01

    The purpose of this study was to determine the feasibility of using a 9.5deg head-up tilt bed rest model to simulate the effects of the 1/6 g load to the human body that exists on the lunar surface. The lunar analog bed rest model utilized a modified hospital bed. The modifications included mounting the mattress on a sled that rolled on bearings to provide freedom of movement. The weight of the sled was off-loaded using a counterweight system to insure that 1/6 body weight was applied along the long axis (z-axis) of the body. Force was verified through use of a force plate mounted at the foot of the bed. A seating assembly was added to the bed to permit periods of sitting. Subjects alternated between standing and sitting positions throughout the day. A total of 35% of the day was spent in the standing position and 65% was spent sitting. In an effort to achieve physiologic fluid shifts expected for a 1/6 G environment, subjects wore compression stockings and performed unloaded foot and ankle exercises. Eight subjects (3 females and 5 males) participated in this study. Subjects spent 13 days in the pre-bed rest phase, 6 days in bed rest and 3 days post bed rest. Subjects consumed a standardized diet throughout the study. To determine feasibility, measures of subject comfort, force and plasma volume were collected. Subject comfort was assessed using a Likert scale. Subjects were asked to assess level of comfort (0-100) for 11 body regions and provide an overall rating. Results indicated minimal to no discomfort as most subjects reported scores of zero. Force measures were performed for each standing position and were validated against subject s calculated 1/6 body weight (r(sup 2) = 0.993). The carbon monoxide rebreathing technique was used to assess plasma volume during pre-bed rest and on the last day of bed rest. Plasma volume results indicated a significant decrease (p = 0.001) from pre to post bed rest values. Subjects lost on average 8.3% (sd = 6.1%) during the

  20. Where Concepts Meet Percepts: Stimulating Analogical Thought in Children.

    ERIC Educational Resources Information Center

    Flick, Larry

    1991-01-01

    Reports an instructional application of a theory of analogical reasoning. Uses the grinding of a sugar cube as an explanatory-predictive analogy for state transitions of water as a stimulus for promoting associations with other appropriate experiences in elementary school students. (PR)

  1. Laboratory analog and numerical study of groundwater flow and solute transport in a karst aquifer with conduit and matrix domains.

    PubMed

    Faulkner, Jonathan; Hu, Bill X; Kish, Stephen; Hua, Fei

    2009-11-03

    New mathematical and laboratory methods have been developed for simulating groundwater flow and solute transport in karst aquifers having conduits imbedded in a porous medium, such as limestone. The Stokes equations are used to model the flow in the conduits and the Darcy equation is used for the flow in the matrix. The Beavers-Joseph interface boundary conditions are adopted to describe the flow exchange at the interface boundary between the two domains. A laboratory analog is used to simulate the conduit and matrix domains of a karst aquifer. The conduit domain is located at the bottom of the transparent plexiglas laboratory analog and glass beads occupy the remaining space to represent the matrix domain. Water flows into and out of the two domains separately and each has its own supply and outflow reservoirs. Water and solute are exchanged through an interface between the two domains. Pressure transducers located within the matrix and conduit domains of the analog provide data that is processed and stored in digital format. Dye tracing experiments are recorded using time-lapse imaging. The data and images produced are analyzed by a spatial analysis program. The experiments provide not only hydraulic head distribution but also capture solute front images and mass exchange measurements between the conduit and matrix domains. In the experiment, we measure and record pressures, and quantify flow rates and solute transport. The results present a plausible argument that laboratory analogs can characterize groundwater water flow, solute transport, and mass exchange between the conduit and matrix domains in a karst aquifer. The analog validates the predictions of a numerical model and demonstrates the need of laboratory analogs to provide verification of proposed theories and the calibration of mathematical models.

  2. The importance of explicitly mapping instructional analogies in science education

    NASA Astrophysics Data System (ADS)

    Asay, Loretta Johnson

    Analogies are ubiquitous during instruction in science classrooms, yet research about the effectiveness of using analogies has produced mixed results. An aspect seldom studied is a model of instruction when using analogies. The few existing models for instruction with analogies have not often been examined quantitatively. The Teaching With Analogies (TWA) model (Glynn, 1991) is one of the models frequently cited in the variety of research about analogies. The TWA model outlines steps for instruction, including the step of explicitly mapping the features of the source to the target. An experimental study was conducted to examine the effects of explicitly mapping the features of the source and target in an analogy during computer-based instruction about electrical circuits. Explicit mapping was compared to no mapping and to a control with no analogy. Participants were ninth- and tenth-grade biology students who were each randomly assigned to one of three conditions (no analogy module, analogy module, or explicitly mapped analogy module) for computer-based instruction. Subjects took a pre-test before the instruction, which was used to assign them to a level of previous knowledge about electrical circuits for analysis of any differential effects. After the instruction modules, students took a post-test about electrical circuits. Two weeks later, they took a delayed post-test. No advantage was found for explicitly mapping the analogy. Learning patterns were the same, regardless of the type of instruction. Those who knew the least about electrical circuits, based on the pre-test, made the most gains. After the two-week delay, this group maintained the largest amount of their gain. Implications exist for science education classrooms, as analogy use should be based on research about effective practices. Further studies are suggested to foster the building of research-based models for classroom instruction with analogies.

  3. Use of the FAR Guide to Present a Pedagogical Analogical Model of Gel Electrophoresis in Year 10 Science

    ERIC Educational Resources Information Center

    Davis, James

    2013-01-01

    This paper is a qualitative, practice based study describing the use of the Focus-Action-Reflection (FAR) Guide (Harrison & Treagust, 2000) to address the shortcomings of a pedagogical analogical model in Year 10 Science. The aim of this paper is to present my experience of the FAR Guide in relation to an analogical model that gave rise to…

  4. Bayesian analogy with relational transformations.

    PubMed

    Lu, Hongjing; Chen, Dawn; Holyoak, Keith J

    2012-07-01

    How can humans acquire relational representations that enable analogical inference and other forms of high-level reasoning? Using comparative relations as a model domain, we explore the possibility that bottom-up learning mechanisms applied to objects coded as feature vectors can yield representations of relations sufficient to solve analogy problems. We introduce Bayesian analogy with relational transformations (BART) and apply the model to the task of learning first-order comparative relations (e.g., larger, smaller, fiercer, meeker) from a set of animal pairs. Inputs are coded by vectors of continuous-valued features, based either on human magnitude ratings, normed feature ratings (De Deyne et al., 2008), or outputs of the topics model (Griffiths, Steyvers, & Tenenbaum, 2007). Bootstrapping from empirical priors, the model is able to induce first-order relations represented as probabilistic weight distributions, even when given positive examples only. These learned representations allow classification of novel instantiations of the relations and yield a symbolic distance effect of the sort obtained with both humans and other primates. BART then transforms its learned weight distributions by importance-guided mapping, thereby placing distinct dimensions into correspondence. These transformed representations allow BART to reliably solve 4-term analogies (e.g., larger:smaller::fiercer:meeker), a type of reasoning that is arguably specific to humans. Our results provide a proof-of-concept that structured analogies can be solved with representations induced from unstructured feature vectors by mechanisms that operate in a largely bottom-up fashion. We discuss potential implications for algorithmic and neural models of relational thinking, as well as for the evolution of abstract thought. Copyright 2012 APA, all rights reserved.

  5. Antarctic analogs for Enceladus

    NASA Astrophysics Data System (ADS)

    Murray, A. E.; Andersen, D. T.; McKay, C. P.

    2014-12-01

    Enceladus is a new world for Astrobiology. The Cassini discovery of the icy plume emanating from the South Polar region indicates an active world, where detection of water, organics, sodium, and nano-particle silica in the plume strongly suggests that the source is a subsurface salty ocean reservoir. Recent gravity data from Cassini confirms the presence of a regional sea extending north to 50°S. An ocean habitat under a thick ice cover is perhaps a recurring theme in the Outer Solar System, but what makes Enceladus unique is that the plume jetting out into space is carrying samples of this ocean. Therefore, through the study of Enceladus' plumes we can gain new insights not only of a possible habitable world in the Solar Systems, but also about the formation and evolution of other icy-satellites. Cassini has been able to fly through this plume - effectively sampling the ocean. It is time to plan for future missions that do more detailed analyses, possibly return samples back to Earth and search for evidence of life. To help prepare for such missions, the need for earth-based analog environments is essential for logistical, methodological (life detection) and theoretical development. We have undertaken studies of two terrestrial environments that are close analogs to Enceladus' ocean: Lake Vida and Lake Untersee - two ice-sealed Antarctic lakes that represent physical, chemical and possibly biological analogs for Enceladus. By studying the diverse biology and physical and chemical constraints to life in these two unique lakes we will begin to understand the potential habitability of Enceladus and other icy moons, including possible sources of nutrients and energy, which together with liquid water are the key ingredients for life. Analog research such as this will also enable us to develop and test new strategies to search for evidence of life on Enceladus.

  6. Does the PFC model of analogy account for decision making, problem solving, reasoning, flexibility, adaptability, and even creativity?

    PubMed

    Barutta, Joaquin; Guex, Raphael; Ibáñez, Agustín

    2010-06-01

    Abstract From everyday cognition to scientific discovery, analogical processes play an important role: bringing connection, integration, and interrelation of information. Recently, a PFC model of analogy has been proposed to explain many cognitive processes and integrate general functional properties of PFC. We argue here that analogical processes do not suffice to explain the cognitive processes and functions of PFC. Moreover the model does not satisfactorily integrate specific explanatory mechanisms required for the different processes involved. Its relevance would be improved if fewer cognitive phenomena were considered and more specific predictions and explanations about those processes were stated.

  7. Terrestrial Analogs to Mars

    NASA Astrophysics Data System (ADS)

    Farr, T. G.; Arcone, S.; Arvidson, R. W.; Baker, V.; Barlow, N. G.; Beaty, D.; Bell, M. S.; Blankenship, D. D.; Bridges, N.; Briggs, G.; Bulmer, M.; Carsey, F.; Clifford, S. M.; Craddock, R. A.; Dickerson, P. W.; Duxbury, N.; Galford, G. L.; Garvin, J.; Grant, J.; Green, J. R.; Gregg, T. K. P.; Guinness, E.; Hansen, V. L.; Hecht, M. H.; Holt, J.; Howard, A.; Keszthelyi, L. P.; Lee, P.; Lanagan, P. D.; Lentz, R. C. F.; Leverington, D. W.; Marinangeli, L.; Moersch, J. E.; Morris-Smith, P. A.; Mouginis-Mark, P.; Olhoeft, G. R.; Ori, G. G.; Paillou, P.; Reilly, J. F., II; Rice, J. W., Jr.; Robinson, C. A.; Sheridan, M.; Snook, K.; Thomson, B. J.; Watson, K.; Williams, K.; Yoshikawa, K.

    2002-08-01

    It is well recognized that interpretations of Mars must begin with the Earth as a reference. The most successful comparisons have focused on understanding geologic processes on the Earth well enough to extrapolate to Mars' environment. Several facets of terrestrial analog studies have been pursued and are continuing. These studies include field workshops, characterization of terrestrial analog sites, instrument tests, laboratory measurements (including analysis of Martian meteorites), and computer and laboratory modeling. The combination of all these activities allows scientists to constrain the processes operating in specific terrestrial environments and extrapolate how similar processes could affect Mars. The Terrestrial Analogs for Mars Community Panel has considered the following two key questions: (1) How do terrestrial analog studies tie in to the Mars Exploration Payload Assessment Group science questions about life, past climate, and geologic evolution of Mars, and (2) How can future instrumentation be used to address these questions. The panel has considered the issues of data collection, value of field workshops, data archiving, laboratory measurements and modeling, human exploration issues, association with other areas of solar system exploration, and education and public outreach activities.

  8. Spectral Study of Water Tracks as an Analog for Recurring Slope Lineae

    NASA Technical Reports Server (NTRS)

    Ojha, L.; Wilhelm, M. B.; Wray, J. J.

    2013-01-01

    Liquid water is a key requirement for life on Earth, and serves as an important constraint on present day habitability on Mars. Recurring Slope Lineae (RSL) are a unique phenomenon on Mars that may be formed by brine seeps. Their morphological, seasonal and temporal characteristics support this hypothesis; however, spectral evidence has been lacking. Ojha et al., 2013 recently analyzed CRISM images from all confirmed RSL in the southern mid-latitudes and equatorial regions and found no spectro-scopic evidence for water. Instead, enhanced abun-dances or distinct grain sizes of both ferric and ferrous minerals are observed at most sites. The strength of these spectral signatures changes as a function of sea-son, possibly indicating removal of a fine-grained sur-face component during RSL flow, precipitation of fer-ric oxides, and/or wetting of the substrate. Water tracks (WT) have been suggested as a terrestrial analog for RSL by Levy et al., 2011. WT are defined as dark surface features that extend downslope in a linear or branching fashion, usually oriented along the steepest local gradient, in the Dry Valleys of Antarctica. They can be 1-3 m in width and can have lengths up to 2 km. They share many morphological and seasonal characteristics with RSL including active growth during summer seasons and fading during winter. Snowmelt, ground ice melt and deliquescence by hygroscopic salts have been suggested as possible formation mechanisms for water tracks. No spectral work to date has been reported for water tracks.

  9. Spanish Velar-Insertion and Analogy: A Usage-Based Diachronic Analysis

    ERIC Educational Resources Information Center

    Fondow, Steven Richard

    2010-01-01

    The theory of Analogical and Exemplar Modeling (AEM) suggests renewed discussion of the formalization of analogy and its possible incorporation in linguistic theory. AEM is a usage-based model founded upon Exemplar Modeling (Bybee 2007, Pierrehumbert 2001) that utilizes several principles of the Analogical Modeling of Language (Skousen 1992, 1995,…

  10. Polar Lakes and Springs as Analogs for Mars

    NASA Technical Reports Server (NTRS)

    McKay, C. P.

    1995-01-01

    If we accept the fluvial features as evidence of liquid water on Mars we conclude that early in Martian history there was an extensive period during which liquid water was prevalent and stable. The duration of this epoch and the environmental conditions that allowed for water flow are uncertain but because liquid water is the most critical environmental requirement for life on Earth, the observation that there was liquid water on Mars during on early epoch is a strong motivation for considering the possibility of past life. Microbial ecosystems can thrive in polar lakes and springs on Earth, such as those in the Antarctic dry valleys, even when the mean temperatures are well below freezing. Mars need not have ever been above freezing for life to persist. These microbial ecosystems provide specific models for possible past martian ecosystems and can be used in the development of methods to locate and identify analogous Martian fossil forms, if they exist.

  11. Hygroscopicity of Early Earth and Titan Laboratory Aerosol Analogs

    NASA Astrophysics Data System (ADS)

    Hasenkopf, C. A.; Beaver, M. R.; Freedman, M. A.; Toon, O. B.; Tolbert, M. A.

    2009-12-01

    We have explored the ability of organic hazes, known to exist in the atmosphere of Titan and postulated to have existed in the Archean Earth atmosphere, to act as cloud condensation nuclei (CCN). These laboratory aerosol analogs are generated via UV-photolysis of early Earth and Titan analog gas mixtures and are designed to mimic the present day atmospheric conditions on Titan and the early Earth atmosphere before the rise of oxygen. Water uptake is observed to occur on the early Earth and Titan aerosol analogs at relative humidities of 80% - 90% via optical growth measurements using cavity ring-down aerosol extinction spectroscopy. We find the optical growth of these aerosols is similar to known slightly-soluble organic acids, such as phthalic and pyromellitic acids. On average, the optical growth of the early Earth analog is slightly larger than the Titan analog. In order to translate our measurements obtained in a subsaturated regime into the CCN ability of these particles, we rely on the hygroscopicity parameter κ, developed by Petters & Kreidenweis (2007). We retrieve κ = 0.17±0.03 and 0.06±0.01 for the early Earth and Titan analogs, respectively. This early Earth analog hygroscopicity value indicates that the aerosol could activate at reasonable water vapor supersaturations. We use previous aerosol mass spectrometry results to correlate the chemical structure of the two types of analog with their hygroscopicity. The hygroscopicity of the early Earth aerosol analog, coupled with the apparent lack of other good CCN during the Archean, helps explain the role of the organic haze in the indirect effect of clouds on the early Earth and indicates that it may have had a significant impact on the hydrological cycle.

  12. The Controlled Ecological Life Support System Antarctic Analog Project: Prototype Crop Production and Water Treatment System Performance

    NASA Technical Reports Server (NTRS)

    Bubenheim, David L.; Flynn, Michael T.; Bates, Maynard; Schlick, Greg; Kliss, Mark (Technical Monitor)

    1997-01-01

    The Controlled Ecological Life Support System (CELSS) Antarctic Analog Project (CAAP), is a joint endeavor between the National Science Foundation, Office of Polar Programs (NSF-OPP) and the NASA. The fundamental objective is to develop, deploy, and operate a testbed of advanced life support technologies at the Amundsen-Scott South Pole Station that enable the objectives of both the NSF and NASA. The functions of food production, water purification, and waste treatment, recycle and reduction provided by CAAP will improve the quality of life for the South Pole inhabitants, reduce logistics dependence, enhance safety and minimize environmental impacts associated with human presence on the polar plateau. Because of the analogous technical, scientific, and mission features with Planetary missions such as a mission to Mars, CAAP provides NASA with a method for validating technologies and overall approaches to supporting humans. Prototype systems for sewage treatment, water recycle and crop production are being evaluated at Ames Research Center. The product water from sewage treatment using a Wiped-Film Rotating Disk is suitable for input to the crop production system. The crop production system has provided an enhanced level of performance compared with projected performance for plant-based life support: an approximate 50% increase in productivity per unit area, more than a 65% decrease in power for plant lighting, and more than a 75% decrease in the total power requirement to produce an equivalent mass of edible biomass.

  13. An analog retina model for detecting dim moving objects against a bright moving background

    NASA Technical Reports Server (NTRS)

    Searfus, R. M.; Colvin, M. E.; Eeckman, F. H.; Teeters, J. L.; Axelrod, T. S.

    1991-01-01

    We are interested in applications that require the ability to track a dim target against a bright, moving background. Since the target signal will be less than or comparable to the variations in the background signal intensity, sophisticated techniques must be employed to detect the target. We present an analog retina model that adapts to the motion of the background in order to enhance targets that have a velocity difference with respect to the background. Computer simulation results and our preliminary concept of an analog 'Z' focal plane implementation are also presented.

  14. Analogy for Drude's Free Electron Model to Promote Students' Understanding of Electric Circuits in Lower Secondary School

    ERIC Educational Resources Information Center

    de Almeida, Maria José B. M.; Salvador, Andreia; Costa, Maria Margarida R. R.

    2014-01-01

    Aiming at a deep understanding of some basic concepts of electric circuits in lower secondary schools, this work introduces an analogy between the behavior of children playing in a school yard with a central lake, subject to different conditions, rules, and stimuli, and Drude's free electron model of metals. Using this analogy from the first…

  15. Crop modeling: Studying the effect of water stress on the driving forces governing plant water potential

    NASA Astrophysics Data System (ADS)

    van Emmerik, T. H. M.; Mirfenderesgi, G.; Bohrer, G.; Steele-Dunne, S. C.; Van De Giesen, N.

    2015-12-01

    Water stress is one of the most important environmental factors that influence plant water dynamics. To prevent excessive water loss and physiological damage, plants can regulate transpiration by adjusting the stomatal aperture. This enhances survival, but also reduced photosynthesis and productivity. During periods of low water availability, stomatal regulation is a trade-off between optimization of either survival or production. Water stress defence mechanisms lead to significant changes in plant dynamics, e.g. leaf and stem water content. Recent research has shown that water content in a corn canopy can change up to 30% diurnally as a result of water stress, which has a considerable influence on radar backscatter from a corn canopy [1]. This highlighted the potential of water stress detection using radar. To fully explore the potential of water stress monitoring using radar, we need to understand the driving forces governing plant water potential. For this study, the recently developed the Finite-Element Tree-Crown Hydrodynamic model version 2 (FETCH2) model is applied to a corn canopy. FETCH2 is developed to resolve the hydrodynamic processes within a plant using the porous media analogy, allowing investigation of the influence of environmental stress factors on plant dynamics such as transpiration, photosynthesis, stomatal conductance, and leaf and stem water content. The model is parameterized and evaluated using a detailed dataset obtained during a three-month field experiment in Flevoland, the Netherlands, on a corn canopy. [1] van Emmerik, T., S. Steele-Dunne, J. Judge and N. van de Giesen: "Impact of Diurnal Variation in Vegetation Water Content on Radar Backscatter of Maize During Water Stress", Geosciences and Remote Sensing, IEEE Transactions on, vol. 52, issue 7, doi: 10.1109/TGRS.2014.2386142, 2015.

  16. Modeling seasonal water balance based on catchments' hedging strategy on evapotranspiration for climate seasonality

    NASA Astrophysics Data System (ADS)

    Wu, S.; Zhao, J.; Wang, H.

    2017-12-01

    This paper develops a seasonal water balance model based on the hypothesis that natural catchments utilize hedging strategy on evapotranspiration for climate seasonality. According to the monthly aridity index, one year is split into wet season and dry season. A seasonal water balance model is developed by analogy to a two-stage reservoir operation model, in which seasonal rainfall infiltration, evapotranspiration and saturation-excess runoff is corresponding to the inflow, release and surplus of the catchment system. Then the optimal hedging between wet season and dry season evapotranspiration is analytically derived with marginal benefit principle. Water budget data sets of 320 catchments in the United States covering the period from 1980 to 2010 are used to evaluate the performance of this model. The Nash-Sutcliffe Efficiency coefficient for evapotranspiration is higher than 0.5 in 84% of the study catchments; while the runoff is 87%. This paper validates catchments' hedging strategy on evapotranspiration for climate seasonality and shows its potential application for seasonal water balance, which is valuable for water resources planning and management.

  17. Analog quantum simulation of generalized Dicke models in trapped ions

    NASA Astrophysics Data System (ADS)

    Aedo, Ibai; Lamata, Lucas

    2018-04-01

    We propose the analog quantum simulation of generalized Dicke models in trapped ions. By combining bicromatic laser interactions on multiple ions we can generate all regimes of light-matter coupling in these models, where here the light mode is mimicked by a motional mode. We present numerical simulations of the three-qubit Dicke model both in the weak field (WF) regime, where the Jaynes-Cummings behavior arises, and the ultrastrong coupling (USC) regime, where a rotating-wave approximation cannot be considered. We also simulate the two-qubit biased Dicke model in the WF and USC regimes and the two-qubit anisotropic Dicke model in the USC regime and the deep-strong coupling regime. The agreement between the mathematical models and the ion system convinces us that these quantum simulations can be implemented in the laboratory with current or near-future technology. This formalism establishes an avenue for the quantum simulation of many-spin Dicke models in trapped ions.

  18. Analogy, explanation, and proof

    PubMed Central

    Hummel, John E.; Licato, John; Bringsjord, Selmer

    2014-01-01

    People are habitual explanation generators. At its most mundane, our propensity to explain allows us to infer that we should not drink milk that smells sour; at the other extreme, it allows us to establish facts (e.g., theorems in mathematical logic) whose truth was not even known prior to the existence of the explanation (proof). What do the cognitive operations underlying the inference that the milk is sour have in common with the proof that, say, the square root of two is irrational? Our ability to generate explanations bears striking similarities to our ability to make analogies. Both reflect a capacity to generate inferences and generalizations that go beyond the featural similarities between a novel problem and familiar problems in terms of which the novel problem may be understood. However, a notable difference between analogy-making and explanation-generation is that the former is a process in which a single source situation is used to reason about a single target, whereas the latter often requires the reasoner to integrate multiple sources of knowledge. This seemingly small difference poses a challenge to the task of marshaling our understanding of analogical reasoning to understanding explanation. We describe a model of explanation, derived from a model of analogy, adapted to permit systematic violations of this one-to-one mapping constraint. Simulation results demonstrate that the resulting model can generate explanations for novel explananda and that, like the explanations generated by human reasoners, these explanations vary in their coherence. PMID:25414655

  19. Visualizing along-strike change in deformation style using analog modeling and digital visualization software

    NASA Astrophysics Data System (ADS)

    Burberry, C. M.

    2012-12-01

    It is a well-known phenomenon that deformation style varies in space; both along the strike of a deformed belt and along the strike of individual structures within that belt. This variation in deformation style is traditionally visualized with a series of closely spaced 2D cross-sections. However, the use of 2D section lines implies plane strain along those lines, and the true 3D nature of the deformation is not necessarily captured. By using a combination of remotely sensed data, analog modeling of field datasets and this remote data, and numerical and digital visualization of the finished model, a 3D understanding and restoration of the deformation style within the region can be achieved. The workflow used for this study begins by considering the variation in deformation style which can be observed from satellite images and combining this data with traditional field data, in order to understand the deformation in the region under consideration. The conceptual model developed at this stage is then modeled using a sand and silicone modeling system, where the kinematics and dynamics of the deformation processes can be examined. A series of closely-spaced cross-sections, as well as 3D images of the deformation, are created from the analog model, and input into a digital visualization and modeling system for restoration. In this fashion, a valid 3D model is created where the internal structure of the deformed system can be visualized and mined for information. The region used in the study is the Sawtooth Range, Montana. The region forms part of the Montana Disturbed Belt in the Front Ranges of the Rocky Mountains, along strike from the Alberta Syncline in the Canadian Rocky Mountains. Interpretation of satellite data indicates that the deformation front structures include both folds and thrust structures. The thrust structures vary from hinterland-verging triangle zones to foreland-verging imbricate thrusts along strike, and the folds also vary in geometry along

  20. The baby and the bath water: improving metaphors and analogies in high school biology texts

    NASA Astrophysics Data System (ADS)

    Shors, Luke

    This dissertation is concerned with understanding how metaphors and analogies function in biology education and whether some of the philosophical critiques of the language used in the field of biology -- and in particular its accompanying metaphors and analogies, have a basis in the educational materials used to teach the subject. This inquiry was carried out through examining the pedagogical features and content of metaphors and analogies from three high school biology textbooks. After identifying over two hundred and twenty-five verbal and pictorial metaphors and analogies, these figures of speech were coded based on prior research that establishes effective characteristics for their use. In tandem with this quantitative analysis, a philosophical analysis considers how well the content of these metaphors and analogies aligns with current scientific understanding and what misunderstandings may be engendered through the use of these metaphors and analogies. The major findings of the analysis include: 1) Textbook authors are much more likely to utilize metaphors and analogies as well as signal their presence to students compared with past analyses; 2) A number of metaphors and analogies either contain errors in analogical mapping or use source analogues that are too antiquated to support today's students; 3) The content of many metaphors and analogies is frequently outdated in reference to current scientific understanding; and 4) Many metaphors and analogies tend to reinforce tacit elements of past scientific paradigms - these are termed 'reinforcing metaphors' in the dissertation and include nature as machine, nature as blueprint or information, nature as business and nature as war. The present work submits several implications for students learning biology as well as the manner in which students come to understand the natural world. The work suggests ways to reduce ineffective metaphors and analogies as well as reliance on reinforcing metaphors. It offers new

  1. Analog quantum simulation of the Rabi model in the ultra-strong coupling regime.

    PubMed

    Braumüller, Jochen; Marthaler, Michael; Schneider, Andre; Stehli, Alexander; Rotzinger, Hannes; Weides, Martin; Ustinov, Alexey V

    2017-10-03

    The quantum Rabi model describes the fundamental mechanism of light-matter interaction. It consists of a two-level atom or qubit coupled to a quantized harmonic mode via a transversal interaction. In the weak coupling regime, it reduces to the well-known Jaynes-Cummings model by applying a rotating wave approximation. The rotating wave approximation breaks down in the ultra-strong coupling regime, where the effective coupling strength g is comparable to the energy ω of the bosonic mode, and remarkable features in the system dynamics are revealed. Here we demonstrate an analog quantum simulation of an effective quantum Rabi model in the ultra-strong coupling regime, achieving a relative coupling ratio of g/ω ~ 0.6. The quantum hardware of the simulator is a superconducting circuit embedded in a cQED setup. We observe fast and periodic quantum state collapses and revivals of the initial qubit state, being the most distinct signature of the synthesized model.An analog quantum simulation scheme has been explored with a quantum hardware based on a superconducting circuit. Here the authors investigate the time evolution of the quantum Rabi model at ultra-strong coupling conditions, which is synthesized by slowing down the system dynamics in an effective frame.

  2. Analog Model Study of Ground-Water Flow in the Rehoboth Bay Area, Delaware.

    DTIC Science & Technology

    The study concerns ground- water flow in the Rehoboth Bay area, Delaware, a coastal area which depends on ground water for its fresh- water supply...Increased pumping demands may threaten to lower the water table and allow salt- water intrusion into the wells. The study was conducted using a viscous...use two different glycerin solutions to make observations and predict interactions between fresh and salt water in nature. Results indicate the

  3. Analog Experiment for rootless cone eruption

    NASA Astrophysics Data System (ADS)

    Noguchi, R.; Hamada, A.; Suzuki, A.; Kurita, K.

    2017-09-01

    Rootless cone is a unique geomorphological landmark to specify igneous origin of investigated terrane, which is formed by magma-water interaction. To understand its formation mechanism we conducted analog experiment for heat-induced vesiculation by using hot syrup and sodium bicarbonate solution.

  4. Modelling the light-scattering properties of a planetary-regolith analog sample

    NASA Astrophysics Data System (ADS)

    Vaisanen, T.; Markkanen, J.; Hadamcik, E.; Levasseur-Regourd, A. C.; Lasue, J.; Blum, J.; Penttila, A.; Muinonen, K.

    2017-12-01

    Solving the scattering properties of asteroid surfaces can be made cheaper, faster, and more accurate with reliable physics-based electromagnetic scattering programs for large and dense random media. Existing exact methods fail to produce solutions for such large systems and it is essential to develop approximate methods. Radiative transfer (RT) is an approximate method which works for sparse random media such as atmospheres fails when applied to dense media. In order to make the method applicable to dense media, we have developed a radiative-transfer coherent-backscattering method (RT-CB) with incoherent interactions. To show the current progress with the RT-CB, we have modeled a planetary-regolith analog sample. The analog sample is a low-density agglomerate produced by random ballistic deposition of almost equisized silicate spheres studied using the PROGRA2-surf experiment. The scattering properties were then computed with the RT-CB assuming that the silicate spheres were equisized and that there were a Gaussian particle size distribution. The results were then compared to the measured data and the intensity plot is shown below. The phase functions are normalized to unity at the 40-deg phase angle. The tentative intensity modeling shows good match with the measured data, whereas the polarization modeling shows discrepancies. In summary, the current RT-CB modeling is promising, but more work needs to be carried out, in particular, for modeling the polarization. Acknowledgments. Research supported by European Research Council with Advanced Grant No. 320773 SAEMPL, Scattering and Absorption of ElectroMagnetic waves in ParticuLate media. Computational resources provided by CSC - IT Centre for Science Ltd, Finland.

  5. Electric analog of three-dimensional flow to wells and its application to unconfined aquifers

    USGS Publications Warehouse

    Stallman, Robert W.

    1963-01-01

    Electric-analog design criteria are established from the differential equations of ground-water flow for analyzing pumping-test data. A convenient analog design was obtained by transforming the cylindrical equation of flow to a rectilinear form. The design criteria were applied in the construction of an electric analog, which was used for studying pumping-test data collected near Grand Island, Nebr. Data analysis indicated (1) vertical flow components near pumping wells in unconfined aquifers may be much more significant in the control of water-table decline than radial flow components for as much as a day of pumping; (2) the specific yield during the first few minutes of pumping appears to be a very small fraction of that observed after pumping for more than 1 day; and (3) estimates of specific yield made from model studies seem much more sensitive to variations in assumed flow conditions than are estimates of permeability. Analysis of pumping-test data where vertical flow components are important requires that the degree of anisotropy be known. A procedure for computing anisotropy directly from drawdowns observed at five points was developed. Results obtained in the analog study emphasize the futility of calculating unconfined aquifer properties from pumping tests of short duration by means of equations based on the assumptions that vertical flow components are negligible and specific yield is constant.

  6. Lunar Analog

    NASA Technical Reports Server (NTRS)

    Cromwell, Ronita L.

    2009-01-01

    In this viewgraph presentation, a ground-based lunar analog is developed for the return of manned space flight to the Moon. The contents include: 1) Digital Astronaut; 2) Bed Design; 3) Lunar Analog Feasibility Study; 4) Preliminary Data; 5) Pre-pilot Study; 6) Selection of Stockings; 7) Lunar Analog Pilot Study; 8) Bed Design for Lunar Analog Pilot.

  7. Can Pupils Use Taught Analogies for Electric Current?

    ERIC Educational Resources Information Center

    Black, David; Solomon, Joan

    1987-01-01

    Discusses the use of analogies and models for teaching about electric current. Reports on a study in which one group of students used analogies to learn about electric current and one did not. Results indicate that, in this case, analogies did not play a significant role in student understanding. (TW)

  8. High energy density soft X-ray momentum coupling to comet analogs for NEO mitigation

    DOE PAGES

    Remo, J. L.; Lawrence, R. J.; Jacobsen, S. B.; ...

    2016-09-27

    Here, we applied MBBAY high fluence pulsed radiation intensity driven momentum transfer analysis to calculate X-ray momentum coupling coefficients C M=(Pa s)/(J/m 2) for two simplified comet analog materials: i) water ice, and ii) 70% water ice and 30% distributed olivine grains. The momentum coupling coefficients (C M) max of 50×10 –5 s/m, are about an order of magnitude greater than experimentally determined and computed MBBAY values for meteoritic materials that are analogs for asteroids. From the values for comet analog materials we infer applied energies (via momentum transfer) required to deflect an Earth crossing comet from impacting Earth bymore » a sufficient amount (~1 cm/s) to avert collision ~a year in advance. Comet model calculations indicate for C M = 5 × 10 –4 s/m the deflection of a 2 km comet with a density 600 kg/m 3 by 1 cm/s requires an applied energy on the target surface of 5 × 10 13 J, the equivalent of 12 kT of TNT. Depending on the geometrical configuration of the interaction the explosive yield required could be an order of magnitude higher.« less

  9. Cyber Analogies

    DTIC Science & Technology

    2014-02-28

    distribution is unlimited 13. SUPPLEMENTARY NOTES 14. ABSTRACT This anthology of cyber analogies will resonate with readers whose duties call for them...THIS PAGE INTENTIONALLY LEFT BLANK v ABSTRACT This anthology of cyber analogies will resonate with readers...fresh insights. THE CASE FOR ANALOGIES All of us on the cyber analogies team hope that this anthol- ogy will resonate with readers whose duties call

  10. Detecting Analogies Unconsciously

    PubMed Central

    Reber, Thomas P.; Luechinger, Roger; Boesiger, Peter; Henke, Katharina

    2014-01-01

    Analogies may arise from the conscious detection of similarities between a present and a past situation. In this functional magnetic resonance imaging study, we tested whether young volunteers would detect analogies unconsciously between a current supraliminal (visible) and a past subliminal (invisible) situation. The subliminal encoding of the past situation precludes awareness of analogy detection in the current situation. First, participants encoded subliminal pairs of unrelated words in either one or nine encoding trials. Later, they judged the semantic fit of supraliminally presented new words that either retained a previously encoded semantic relation (“analog”) or not (“broken analog”). Words in analogs versus broken analogs were judged closer semantically, which indicates unconscious analogy detection. Hippocampal activity associated with subliminal encoding correlated with the behavioral measure of unconscious analogy detection. Analogs versus broken analogs were processed with reduced prefrontal but enhanced medial temporal activity. We conclude that analogous episodes can be detected even unconsciously drawing on the episodic memory network. PMID:24478656

  11. A MEDL Collection Showcase: A Collection of Hands-on Physical Analog Models and Demonstrations From the Department of Geosciences MEDL at Virginia Tech

    NASA Astrophysics Data System (ADS)

    Glesener, G. B.

    2017-12-01

    The Geosciences Modeling and Educational Demonstrations Laboratory (MEDL) will present a suite of hands-on physical analog models from our curriculum materials collection used to teach about a wide range of geoscience processes. Many of the models will be equipped with Vernier data collection sensors, which visitors will be encouraged to explore on-site. Our goal is to spark interest and discussion around the affordances of these kinds of curriculum materials. Important topics to discuss will include: (1) How can having a collection of hands-on physical analog models be used to effectively produce successful broader impacts activities for research proposals? (2) What kinds of learning outcomes have instructors observed when teaching about temporally and spatially challenging concepts using physical analog models? (3) What does it take for an institution to develop their own MEDL collection? and (4) How can we develop a community of individuals who provide on-the-ground support for instructors who use physical analog models in their classroom.

  12. Teaching Einsteinian Physics at Schools: Part 2, Models and Analogies for Quantum Physics

    ERIC Educational Resources Information Center

    Kaur, Tejinder; Blair, David; Moschilla, John; Zadnik, Marjan

    2017-01-01

    The Einstein-First project approaches the teaching of Einsteinian physics through the use of physical models and analogies. This paper presents an approach to the teaching of quantum physics which begins by emphasising the particle-nature of light through the use of toy projectiles to represent photons. This allows key concepts including the…

  13. A unified model of bedforms in water, Earth and other planetary bodies

    NASA Astrophysics Data System (ADS)

    Duran Vinent, O.; Claudin, P.; Winter, C.; Andreotti, B.

    2017-12-01

    The emergence of bedforms as result of the coupling between a fluid flow and sediment transport is a remarkable example of self-organized natural patterns. Subaqueous bedforms generated by unidirectional water flows, like ripples, dunes or compound bedforms, have been shown to depend on grain size, water depth and flow velocity. However, this variety of morphologies, empirically classified according to their size, is still not understood in terms of mechanical and hydrodynamical mechanisms. We present a process-based model that simultaneously explain the scaling of bedforms for Water, Air, Mars and Venus, and can be potentially applied to other planetary bodies such as Titan or Pluto. The model couples hydrodynamics over a modulated bed to sediment transport and relaxation laws, and resolves pattern coarsening from initial to mature bedforms. We find two fundamental types of bedforms, called `laminar' and `turbulent' and analogous to water ripples and dunes, and the conditions leading to their formation. By relating morphology to hydrodynamic and sediment transport details, our model opens the way to extract hydrodynamic information from the stratigraphy record and shed a light to past and current planetary conditions.

  14. McMurdo Dry Valleys, Antarctica - A Mars Phoenix Mission Analog

    NASA Technical Reports Server (NTRS)

    Tamppari, L. K.; Anderson, R. M.; Archer, D.; Douglas, S.; Kounaves, S. P.; McKay, C. P.; Ming, Douglas W.; Moore, Q.; Quinn, J. E.; Smith, P. H.; hide

    2010-01-01

    The Phoenix mission (PHX; May 25 - Nov. 2, 2008) studied the north polar region of Mars (68deg N) to understand the history of water and potential for habitability. Phoenix carried with it a wet chemistry lab (WCL) capable of determining the basic solution chemistry of the soil and the pH value, a thermal and evolved-gas analyzer capable of determining the mineralogy of the soil and detecting ice, microscopes capable of seeing soil particle shapes, sizes and colors at very high resolution, and a soil probe (TECP) capable of detecting unfrozen water in the soil. PHX coincided with an international effort to study the Earth s polar regions named the International Polar Year (IPY; 2007-2008). The best known Earth analog to the Martian high-northern plains, where Phoenix landed, are the McMurdo Dry Valleys (MDV), Antarctica (Fig. 1). Thus, the IPY afforded a unique opportunity to study the MDV with the same foci - history of water and habitability - as PHX. In austral summer 2007, our team took engineering models of WCL and TECP into the MDV and performed analgous measurements. We also collected sterile samples and analyzed them in our home laboratories using state-of-the-art tools. While PHX was not designed to perform biologic analyses, we were able to do so with the MDV analog samples collected.

  15. Model, analysis, and evaluation of the effects of analog VLSI arithmetic on linear subspace-based image recognition.

    PubMed

    Carvajal, Gonzalo; Figueroa, Miguel

    2014-07-01

    Typical image recognition systems operate in two stages: feature extraction to reduce the dimensionality of the input space, and classification based on the extracted features. Analog Very Large Scale Integration (VLSI) is an attractive technology to achieve compact and low-power implementations of these computationally intensive tasks for portable embedded devices. However, device mismatch limits the resolution of the circuits fabricated with this technology. Traditional layout techniques to reduce the mismatch aim to increase the resolution at the transistor level, without considering the intended application. Relating mismatch parameters to specific effects in the application level would allow designers to apply focalized mismatch compensation techniques according to predefined performance/cost tradeoffs. This paper models, analyzes, and evaluates the effects of mismatched analog arithmetic in both feature extraction and classification circuits. For the feature extraction, we propose analog adaptive linear combiners with on-chip learning for both Least Mean Square (LMS) and Generalized Hebbian Algorithm (GHA). Using mathematical abstractions of analog circuits, we identify mismatch parameters that are naturally compensated during the learning process, and propose cost-effective guidelines to reduce the effect of the rest. For the classification, we derive analog models for the circuits necessary to implement Nearest Neighbor (NN) approach and Radial Basis Function (RBF) networks, and use them to emulate analog classifiers with standard databases of face and hand-writing digits. Formal analysis and experiments show how we can exploit adaptive structures and properties of the input space to compensate the effects of device mismatch at the application level, thus reducing the design overhead of traditional layout techniques. Results are also directly extensible to multiple application domains using linear subspace methods. Copyright © 2014 Elsevier Ltd. All rights

  16. Modeling selective attention using a neuromorphic analog VLSI device.

    PubMed

    Indiveri, G

    2000-12-01

    Attentional mechanisms are required to overcome the problem of flooding a limited processing capacity system with information. They are present in biological sensory systems and can be a useful engineering tool for artificial visual systems. In this article we present a hardware model of a selective attention mechanism implemented on a very large-scale integration (VLSI) chip, using analog neuromorphic circuits. The chip exploits a spike-based representation to receive, process, and transmit signals. It can be used as a transceiver module for building multichip neuromorphic vision systems. We describe the circuits that carry out the main processing stages of the selective attention mechanism and provide experimental data for each circuit. We demonstrate the expected behavior of the model at the system level by stimulating the chip with both artificially generated control signals and signals obtained from a saliency map, computed from an image containing several salient features.

  17. Modeling and Parameter Estimation of Spacecraft Fuel Slosh with Diaphragms Using Pendulum Analogs

    NASA Technical Reports Server (NTRS)

    Chatman, Yadira; Gangadharan, Sathya; Schlee, Keith; Ristow, James; Suderman, James; Walker, Charles; Hubert, Carl

    2007-01-01

    Prediction and control of liquid slosh in moving containers is an important consideration in the design of spacecraft and launch vehicle control systems. Even with modern computing systems, CFD type simulations are not fast enough to allow for large scale Monte Carlo analyses of spacecraft and launch vehicle dynamic behavior with slosh included. It is still desirable to use some type of simplified mechanical analog for the slosh to shorten computation time. Analytic determination of the slosh analog parameters has met with mixed success and is made even more difficult by the introduction of propellant management devices such as elastomeric diaphragms. By subjecting full-sized fuel tanks with actual flight fuel loads to motion similar to that experienced in flight and measuring the forces experienced by the tanks, these parameters can be determined experimentally. Currently, the identification of the model parameters is a laborious trial-and-error process in which the hand-derived equations of motion for the mechanical analog are evaluated and their results compared with the experimental results. This paper will describe efforts by the university component of a team comprised of NASA's Launch Services Program, Embry Riddle Aeronautical University, Southwest Research Institute and Hubert Astronautics to improve the accuracy and efficiency of modeling techniques used to predict these types of motions. Of particular interest is the effect of diaphragms and bladders on the slosh dynamics and how best to model these devices. The previous research was an effort to automate the process of slosh model parameter identification using a MATLAB/SimMechanics-based computer simulation. These results are the first step in applying the same computer estimation to a full-size tank and vehicle propulsion system. The introduction of diaphragms to this experimental set-up will aid in a better and more complete prediction of fuel slosh characteristics and behavior. Automating the

  18. Acoustic Analogy and Alternative Theories for Jet Noise Prediction

    NASA Technical Reports Server (NTRS)

    Morris, Philip J.; Farassat, F.

    2002-01-01

    Several methods for the prediction of jet noise are described. All but one of the noise prediction schemes are based on Lighthill's or Lilley's acoustic analogy, whereas the other is the jet noise generation model recently proposed by Tam and Auriault. In all of the approaches, some assumptions must be made concerning the statistical properties of the turbulent sources. In each case the characteristic scales of the turbulence are obtained from a solution of the Reynolds-averaged Navier-Stokes equation using a kappa-sigma turbulence model. It is shown that, for the same level of empiricism, Tam and Auriault's model yields better agreement with experimental noise measurements than the acoustic analogy. It is then shown that this result is not because of some fundamental flaw in the acoustic analogy approach, but instead is associated with the assumptions made in the approximation of the turbulent source statistics. If consistent assumptions are made, both the acoustic analogy and Tam and Auriault's model yield identical noise predictions. In conclusion, a proposal is presented for an acoustic analogy that provides a clearer identification of the equivalent source mechanisms, as is a discussion of noise prediction issues that remain to be resolved.

  19. Learning Plate Tectonics Using a Pre-Analogy Step

    NASA Astrophysics Data System (ADS)

    Glesener, G. B.; Sandoval, W. A.

    2011-12-01

    Previous research has shown that children tend to demonstrate lower performance on analogical reasoning tasks at a causal relations level compared to most adults (Gentner & Toupin, 1986). This tendency is an obstacle that geoscience educators must overcome because of the high frequency of analogies used in geoscience pedagogy. In particular, analog models are used to convey complex systems of non-everyday/non-observable events found in nature, such as plate tectonics. Key factors in successful analogical reasoning that have been suggested by researchers include knowledge of the causal relations in the base analog (Brown & Kane, 1988; Gentner, 1988; Gentner & Toupin, 1986), and development of learning strategies and metaconceptual competence(Brown & Kane, 1988). External factors, such as guiding cues and hints have been useful cognitive supports that help students reason through analogical problems (Gick & Holyoak, 1980). Cognitive supports have been seen by researchers to decrease processing demands on retrieval and working memory (Richland, Zur, & Holyoak, 2007). We observed third and fourth graders learning about plate tectonics beginning with a pre-analogy step-a cognitive support activity a student can do before working with an analogy to understand the target. This activity was designed to aid students in developing their understanding of object attributes and relations within an analog model so that more focus can be placed on mapping the corresponding higher-order relations between the base and target. Students learned targeted concepts of plate tectonics, as measured by pre to post gains on items adapted from the Geosciences Concept Inventory. Analyses of classroom interaction showed that students used the object attributes and higher-order relations highlighted in the pre-analogy activity as resources to reason about plate boundaries and plate movement during earthquakes.

  20. Hybrid MC/QC simulations of water-assisted proton transfer in nucleosides. Guanosine and its analog acyclovir.

    PubMed

    Markova, Nadezhda; Pejov, Ljupco; Stoyanova, Nina; Enchev, Venelin

    2017-05-01

    To provide an in-depth insight into the molecular basis of spontaneous tautomerism in DNA and RNA base pairs, a hybrid Monte Carlo (MC)-quantum chemical (QC) methodology is implemented to map two-dimensional potential energy surfaces along the reaction coordinates of solvent-assisted proton transfer processes in guanosine and its analog acyclovir in aqueous solution. The solvent effects were simulated by explicit inclusion of water molecules that model the relevant part of the first hydration shell around the solute. The position of these water molecules was estimated by carrying out a classical Metropolis Monte Carlo simulation of dilute water solutions of the guanosine (Gs) and acyclovir (ACV) and subsequently analyzing solute-solvent intermolecular interactions in the statistically-independent MC-generated configurations. The solvent-assisted proton transfer processes were further investigated using two different ab initio MP2 quantum chemical approaches. In the first one, potential energy surfaces of the 'bare' finite solute-solvent clusters containing Gs/ACV and four water molecules (MP2/6-31+G(d,p) level) were explored, while within the second approach, these clusters were embedded in 'bulk' solvent treated as polarizable continuum (C-PCM/MP2/6-31+G(d,p) level of theory). It was found that in the gas phase and in water solution, the most stable tautomer for guanosine and acyclovir is the 1H-2-amino-6-oxo form followed by the 2-amino-6-(sZ)-hydroxy form. The energy barriers of the water-assisted proton transfer reaction in guanosine and in acyclovir are found to be very similar - 11.74 kcal mol -1 for guanosine and 11.16 kcal mol -1 for acyclovir, and the respective rate constants (k = 1.5 × 10 1 s -1 , guanosine and k = 4.09 × 10 1 s -1 , acyclovir), are sufficiently large to generate the 2-amino-6-(sZ)-hydroxy tautomer. The analysis of the reaction profiles in both compounds shows that the proton transfer processes occur through the

  1. [Interpretative method as a synthesis of explicative, teleologic and analogic models].

    PubMed

    Yáñez Cortés, R

    1980-06-01

    To establish the basis of the interpretative method is congruous with finding a solid basis--epistemologically speaking--to the analytic theory. This basis would be the means to transform this theory into a real science with its necessary adecuation among method, act and object of knowledge. It is only from a scientific stand that the psychoanalytic theory will be able to face successfully the reductionisms that menace it, be it the biologist-naturalism with its explanations of the psychic phenomena by means of mechanisms and biologic models or be it the speculative ideologies with their nucleus of technical praxis which make it impossible for the social-factic sciences to become real sciences. We propose as interpretative method the union of two models: the teleologic one which makes possible the appearance of intelligible, contingent and variable explanations between an antecedent and a consequent on one side, and on the other, the analogic model with its two moments: the comparative and the symbolic one. These moments makes possible the comparison and the union between antecedent and consequent baring in mind the "natural" ambiguity of the subject-object in question. The principal objective of the method--as a regulative idea in the Kantian sense--would be the search of univocity as regards the choice of one and only one sense from all the possible senses that "explain" the motive relationship or motive-end relationship in order to make the interpretation scientific. This status of scientificity should obey the rules of explanation: that the interpretations be derived effectively from the presupposed theory, that they really explain what they claim to explain, that they are not contradictory or contrary in the same ontologic level. We postulate that the synthesis of the two mentioned models, the teleologic-explanative and the analogic one allows us to find a possibility to make clear the "dark" sense of the noun interpretation and in this way the factibility of

  2. Physicochemical analog for modeling superimposed and coded memories

    NASA Astrophysics Data System (ADS)

    Ensanian, Minas

    1992-07-01

    The mammalian brain is distinguished by a life-time of memories being stored within the same general region of physicochemical space, and having two extraordinary features. First, memories to varying degrees are superimposed, as well as coded. Second, instantaneous recall of past events can often be affected by relatively simple, and seemingly unrelated sensory clues. For the purposes of attempting to mathematically model such complex behavior, and for gaining additional insights, it would be highly advantageous to be able to simulate or mimic similar behavior in a nonbiological entity where some analogical parameters of interest can reasonably be controlled. It has recently been discovered that in nonlinear accumulative metal fatigue memories (related to mechanical deformation) can be superimposed and coded in the crystal lattice, and that memory, that is, the total number of stress cycles can be recalled (determined) by scanning not the surfaces but the `edges' of the objects. The new scanning technique known as electrotopography (ETG) now makes the state space modeling of metallic networks possible. The author provides an overview of the new field and outlines the areas that are of immediate interest to the science of artificial neural networks.

  3. The interplay of conflict and analogy in multidisciplinary teams.

    PubMed

    Paletz, Susannah B F; Schunn, Christian D; Kim, Kevin H

    2013-01-01

    Creative teamwork in multidisciplinary teams is a topic of interest to cognitive psychologists on the one hand, and to both social and organizational psychologists on the other. However, the interconnections between cognitive and social layers have been rarely explored. Drawing on mental models and dissonance theories, the current study takes a central variable studied by cognitive psychologists-analogy-and examines its relationship to a central variable examined by social psychologists-conflict. In an observational, field study, over 11h of audio-video data from conversations of the Mars Exploration Rover scientists were coded for different types of analogy and micro-conflicts that reveal the character of underlying psychological mechanisms. Two different types of time-lagged logistic models applied to these data revealed asymmetric patterns of associations between analogy and conflict. Within-domain analogies, but not within-discipline or outside-discipline analogies, preceded science and work process conflicts, suggesting that in multidisciplinary teams, representational gaps in very close domains will be more likely to spark conflict. But analogies also occurred in reaction to conflict: Process and negative conflicts, but not task conflicts, preceded within-discipline analogies, but not to within-domain or outside-discipline analogies. This study demonstrates ways in which cognition can be bidirectionally tied to social processes and discourse. Copyright © 2012 Elsevier B.V. All rights reserved.

  4. In vivo testing of Renilla luciferase substrate analogs in an orthotopic murine model of human glioblastoma.

    PubMed

    Otto-Duessel, Maya; Khankaldyyan, Vazgen; Gonzalez-Gomez, Ignacio; Jensen, Michael C; Laug, Walter E; Rosol, Michael

    2006-01-01

    In vivo bioluminescent imaging using cells expressing Renilla luciferase is becoming increasingly common. Hindrances to the more widespread use of Renilla luciferase are the high autoluminescence of its natural substrate, coelenterazine, in plasma, the relatively high absorbance by tissue of the light emitted by the enzyme-substrate reaction; rapid clearance of the substrate; and significant cost. These factors, save for the cost, which has its own limiting effect on use, can combine to reduce the sensitivity of in vivo assays utilizing this reporter system, and methods of increasing light output or decreasing autoluminescence could be of great benefit. A number of analogs of coelenterazine are being investigated may accomplish one or both of these goals. In this study that we report on the testing of two new substrate analogs, EnduRen and ViViren, manufactured by Promega Corporation, in an orthotopic murine model of human glioblastoma expressing Renilla luciferase. We have tested these analogs in this cell line both in vitro and in vivo, and find that the substrate viviren results in significantly greater light output than the natural substrate or the other analog EnduRen. This new substrate could be valuable for studies where greater sensitivity is important.

  5. Exobiology site selection for future Mars missions: Martian paleolake sediments and terrestrial analogs

    NASA Technical Reports Server (NTRS)

    Wharton, Robert A., Jr.

    1989-01-01

    This research was conducted to establish the scientific framework for the exobiological study of sediments on Mars and to encourage the selection of these sedimentary deposits as sampling sites for future Mars missions. A study was completed on the Antarctic Dry Valley Lakes (terrestrial analogs of the purported Martian paleolakes) and their sediments that allowed the development of quantitative models relating environmental factors to the nature of the biological community and sediment forming processes. The publications presented include: (1) Diversity of micro-fungi isolated in an Antarctic dry valley; (2) Lake Hoare, Antarctica--sedimentation through a thick perennial ice cover; (3) The possibility of life on Mars during a water-rich past; (4) An Antarctic research outpost as a model for planetary exploration; (5) Early Martian environments--the Antarctic and other terrestrial analogs; (6) Lipophilic pigments from the benthos of a perennially ice-covered Antarctic lake; and (7) Perennially ice-covered Lake Hoare, Antarctica--physical environment, biology, and sedimentation.

  6. Analog synthetic biology.

    PubMed

    Sarpeshkar, R

    2014-03-28

    We analyse the pros and cons of analog versus digital computation in living cells. Our analysis is based on fundamental laws of noise in gene and protein expression, which set limits on the energy, time, space, molecular count and part-count resources needed to compute at a given level of precision. We conclude that analog computation is significantly more efficient in its use of resources than deterministic digital computation even at relatively high levels of precision in the cell. Based on this analysis, we conclude that synthetic biology must use analog, collective analog, probabilistic and hybrid analog-digital computational approaches; otherwise, even relatively simple synthetic computations in cells such as addition will exceed energy and molecular-count budgets. We present schematics for efficiently representing analog DNA-protein computation in cells. Analog electronic flow in subthreshold transistors and analog molecular flux in chemical reactions obey Boltzmann exponential laws of thermodynamics and are described by astoundingly similar logarithmic electrochemical potentials. Therefore, cytomorphic circuits can help to map circuit designs between electronic and biochemical domains. We review recent work that uses positive-feedback linearization circuits to architect wide-dynamic-range logarithmic analog computation in Escherichia coli using three transcription factors, nearly two orders of magnitude more efficient in parts than prior digital implementations.

  7. Extending the surrogacy analogy: applying the advance directive model to biobanks.

    PubMed

    Solomon, Stephanie; Mongoven, Ann

    2015-01-01

    Biobank donors and biobank governance face a conceptual challenge akin to clinical patients and their designated surrogate decision-makers, the necessity of making decisions and policies now that must be implemented under future unknown circumstances. We propose that biobanks take advantage of this parallel to learn lessons from the historical trajectory of advance directives and develop models analogous to current 'best practice' advance directives such as Values Histories and TheFive Wishes. We suggest how such models could improve biobanks' engagement both with communities and with individual donors by being more honest about the limits of current disclosure and eliciting information to ensure the protection of donor interests more robustly through time than current 'informed consent' processes in biobanking. © 2014 S. Karger AG, Basel.

  8. The Acoustic Analogy and Alternative Theories for Jet Noise Prediction

    NASA Technical Reports Server (NTRS)

    Morris, Philip J.; Farassat, F.; Morris, Philip J.

    2002-01-01

    This paper describes several methods for the prediction of jet noise. All but one of the noise prediction schemes are based on Lighthill's or Lilley's acoustic analogy while the other is the jet noise generation model recently proposed by Tam and Auriault. In all the approaches some assumptions must be made concerning the statistical properties of the turbulent sources. In each case the characteristic scales of the turbulence are obtained from a solution of the Reynolds-averaged Navier Stokes equation using a k-epsilon turbulence model. It is shown that, for the same level of empiricism, Tam and Auriault's model yields better agreement with experimental noise measurements than the acoustic analogy. It is then shown that this result is not because of some fundamental flaw in the acoustic analogy approach: but, is associated with the assumptions made in the approximation of the turbulent source statistics. If consistent assumptions are made, both the acoustic analogy and Tam and Auriault's model yield identical noise predictions. The paper concludes with a proposal for an acoustic analogy that provides a clearer identification of the equivalent source mechanisms and a discussion of noise prediction issues that remain to be resolved.

  9. The Acoustic Analogy and Alternative Theories for Jet Noise Prediction

    NASA Technical Reports Server (NTRS)

    Morris, Philip J.; Farassat, F.

    2002-01-01

    This paper describes several methods for the prediction of jet noise. All but one of the noise prediction schemes are based on Lighthill's or Lilley's acoustic analogy while the other is the jet noise generation model recently proposed by Tam and Auriault. In all the approaches some assumptions must be made concerning the statistical properties of the turbulent sources. In each case the characteristic scales of the turbulence are obtained from a solution of the Reynolds-averaged Navier Stokes equation using a k - epsilon turbulence model. It is shown that, for the same level of empiricism, Tam and Auriault's model yields better agreement with experimental noise measurements than the acoustic analogy. It is then shown that this result is not because of some fundamental flaw in the acoustic analogy approach: but, is associated with the assumptions made in the approximation of the turbulent source statistics. If consistent assumptions are made, both the acoustic analogy and Tam and Auriault's model yield identical noise predictions. The paper concludes with a proposal for an acoustic analogy that provides a clearer identification of the equivalent source mechanisms and a discussion of noise prediction issues that remain to be resolved.

  10. Exploring the binding mechanisms of diaminopimelic acid analogs to meso-diaminopimelate dehydrogenase by molecular modeling.

    PubMed

    Wang, Huiqun; Kellogg, Glen E; Xu, Ping; Zhang, Yan

    2018-06-02

    Meso-Diaminopimelic acid (meso-2,6-diamino-heptanedioic acid, DAP) is an important component of the cell wall of many bacteria. Meso-diaminopimelate dehydrogenase (m-Ddh) is a critical enzyme in the process of converting tetrahydrodipicolinate to DAP. Here, we are proposing that DAP analogs targeting m-Ddh may be considered as potential antibiotics. Four DAP analogs without significant structural change from DAP have been obtained and their inhibitory potencies against m-Ddh from the P. gingivalis strain W83 show significant differences from that of DAP. However, their inhibitory mechanisms as for how simple structural change influences the inhibitory potency remain unknown. Therefore, we employed molecular modeling methods to obtain insight into the inhibitory mechanisms of DAP and analogs with m-Ddh. The predicted binding mode of DAP was highly consistent with the experimental structural data and disclosed the important roles played by the binding pocket residues. According to our predictions, the isoxazoline ring of compounds 1 and 2 and the double bonds in compounds 3 and 4 had distinct influences on these compounds' binding to m-Ddh. This enriched understanding of the inhibitory mechanisms of DAP and these four analogs to m-Ddh has provided new and relevant information for future rational development of potent inhibitors targeting m-Ddh. Copyright © 2018. Published by Elsevier Inc.

  11. Licancabur Volcano, Bolivia and life in the Atacama: Environmental physics and analogies to Mars

    NASA Astrophysics Data System (ADS)

    Hock, Andrew Nelson

    Although there is no perfect environmental analog to Mars on Earth, quantitative study of relevant terrestrial field sites can serve as the basis for physical models and technology development to aid future exploration. This dissertation describes original field and laboratory research on two terrestrial analog sites: Licancabur Volcano, Bolivia, and the Atacama Desert, Chile. Atop Licancabur, at an elevation of nearly 6,000 meters above sea level, sits the highest volcanic lake on Earth. Prior to this work, little was known about the lake, its waters, the role of volcanism or its potential relationship to locales on Mars. In the first part of this work, I describe observations of the lake resulting from several years of field study, including data on meteorological conditions and solar irradiance. These and other measurements provide the basis for (1) the first quantitative mass and energy balance model of the lake, and (2) the first determination of the altitude effect on solar visible and ultraviolet flux from the high altitude summit. Under the observed conditions, model results indicate: lake waters are primarily meteoric in origin and evaporating rapidly; volcanic input is not required to explain observations of lake water temperature or year-end model results. Nearby, Chile's Atacama Desert is known to be one of the driest, most inhospitable environments on Earth. There, environmental similarities to Mars provide an apt testing ground for new astrobiological exploration technologies. In the latter part of this work, I present results from my work with the Life In The Atacama (LITA) Mars rover field experiment. In particular, I report on the development of a new data analysis tool named the LITA Data Scoring System (DSS). Subject to the user-defined constraints, the DSS was used to facilitate targeting, analysis and mapping of rover science results relevant to potential habitability and evidence for life at three desert field sites. Although experimental in

  12. Estimates of ground-water recharge rates for two small basins in central Nevada

    USGS Publications Warehouse

    Lichty, R.W.; McKinley, P.W.

    1995-01-01

    Estimates of ground-water recharge rates developed from hydrologic modeling studies are presented for 3-Springs and East Stewart basins. two small basins (analog sites) located in central Nevada. The analog-site studies were conducted to aid in the estimation of recharge to the paleohydrologic regime associated with ground water in the vicinity of Yucca Mountain under wetter climatic conditions. The two analog sites are located to the north and at higher elevations than Yucca Mountain, and the prevailing (current) climatic conditions at these sites is thought to be representative of the possible range of paleoclimatic conditions in the general area of Yucca Mountain during the Quaternary. Two independent modeling approaches were conducted at each of the analog sites using observed hydrologic data on precipitation, temperature, solar radiation stream discharge, and chloride-ion water chemistry for a 6-year study period (October 1986 through September 1992). Both models quantify the hydrologic water-balance equation and yield estimates of ground-water recharge, given appropriate input data. The first model uses a traditional approach to quantify watershed hydrology through a precipitation-runoff modeling system that accounts for the spatial variability of hydrologic inputs, processes, and responses (outputs) using a dailycomputational time step. The second model is based on the conservative nature of the dissolved chloride ion in selected hydrologic environments, and its use as a natural tracer allows the computation of acoupled, water and chloride-ion, mass-balance system of equations to estimate available water (sum ofsurface runoff and groundwater recharge). Results of the modeling approaches support the conclusion that reasonable estimates of average-annual recharge to ground water range from about 1 to 3 centimeters per year for 3-Springs basin (the drier site), and from about 30 to 32 centimeters per year for East Stewart basin (the wetter site). The most

  13. Analogical and category-based inference: a theoretical integration with Bayesian causal models.

    PubMed

    Holyoak, Keith J; Lee, Hee Seung; Lu, Hongjing

    2010-11-01

    A fundamental issue for theories of human induction is to specify constraints on potential inferences. For inferences based on shared category membership, an analogy, and/or a relational schema, it appears that the basic goal of induction is to make accurate and goal-relevant inferences that are sensitive to uncertainty. People can use source information at various levels of abstraction (including both specific instances and more general categories), coupled with prior causal knowledge, to build a causal model for a target situation, which in turn constrains inferences about the target. We propose a computational theory in the framework of Bayesian inference and test its predictions (parameter-free for the cases we consider) in a series of experiments in which people were asked to assess the probabilities of various causal predictions and attributions about a target on the basis of source knowledge about generative and preventive causes. The theory proved successful in accounting for systematic patterns of judgments about interrelated types of causal inferences, including evidence that analogical inferences are partially dissociable from overall mapping quality.

  14. Insulin analogs with improved pharmacokinetic profiles.

    PubMed

    Brange; Vølund

    1999-02-01

    The aim of insulin replacement therapy is to normalize blood glucose in order to reduce the complications of diabetes. The pharmacokinetics of the traditional insulin preparations, however, do not match the profiles of physiological insulin secretion. The introduction of the rDNA technology 20 years ago opened new ways to create insulin analogs with altered properties. Fast-acting analogs are based on the idea that an insulin with less tendency to self-association than human insulin would be more readily absorbed into the systemic circulation. Protracted-acting analogs have been created to mimic the slow, steady rate of insulin secretion in the fasting state. The present paper provides a historical review of the efforts to change the physicochemical and pharmacological properties of insulin in order to improve insulin therapy. The available clinical studies of the new insulins are surveyed and show, together with modeling results, that new strategies for optimal basal-bolus treatment are required for utilization of the new fast-acting analogs.

  15. Analog synthetic biology

    PubMed Central

    Sarpeshkar, R.

    2014-01-01

    We analyse the pros and cons of analog versus digital computation in living cells. Our analysis is based on fundamental laws of noise in gene and protein expression, which set limits on the energy, time, space, molecular count and part-count resources needed to compute at a given level of precision. We conclude that analog computation is significantly more efficient in its use of resources than deterministic digital computation even at relatively high levels of precision in the cell. Based on this analysis, we conclude that synthetic biology must use analog, collective analog, probabilistic and hybrid analog–digital computational approaches; otherwise, even relatively simple synthetic computations in cells such as addition will exceed energy and molecular-count budgets. We present schematics for efficiently representing analog DNA–protein computation in cells. Analog electronic flow in subthreshold transistors and analog molecular flux in chemical reactions obey Boltzmann exponential laws of thermodynamics and are described by astoundingly similar logarithmic electrochemical potentials. Therefore, cytomorphic circuits can help to map circuit designs between electronic and biochemical domains. We review recent work that uses positive-feedback linearization circuits to architect wide-dynamic-range logarithmic analog computation in Escherichia coli using three transcription factors, nearly two orders of magnitude more efficient in parts than prior digital implementations. PMID:24567476

  16. Analogical acts as conceptual strategies in science, engineering and the humanities

    NASA Technical Reports Server (NTRS)

    Winkler, V. M.

    1981-01-01

    The composing models which operate by means of analogy are identified. The importance of analogical acts in the prewriting stage of the composing process is discussed. The relations between analogical acts and concept formation are explored. A basic correspondence between the analogical thinking employed in successful learning and analogical thinking as a composing strategy is discussed. Teaching analogical acts as conceptual strategies for exploring problems and generating the form and content of discourse is presented in support of the contention that writing is a unique mode of learning.

  17. Application of natural analog studies to exploration for ore deposits

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gustafson, D.L.

    1995-09-01

    Natural analogs are viewed as similarities in nature and are routinely utilized by exploration geologists in their search for economic mineral deposits. Ore deposit modeling is undertaken by geologists to direct their exploration activities toward favorable geologic environments and, therefore, successful programs. Two types of modeling are presented: (i) empirical model development based on the study of known ore deposit characteristics, and (ii) concept model development based on theoretical considerations and field observations that suggest a new deposit type, not known to exist in nature, may exist and justifies an exploration program. Key elements that are important in empirical modelmore » development are described, and examples of successful applications of these natural analogs to exploration are presented. A classical example of successful concept model development, the discovery of the McLaughlin gold mine in California, is presented. The utilization of natural analogs is an important facet of mineral exploration. Natural analogs guide explorationists in their search for new discoveries, increase the probability of success, and may decrease overall exploration expenditure.« less

  18. Glass Microbeads in Analog Models of Thrust Wedges.

    PubMed

    D'Angelo, Taynara; Gomes, Caroline J S

    2017-01-01

    Glass microbeads are frequently used in analog physical modeling to simulate weak detachment zones but have been neglected in models of thrust wedges. Microbeads differ from quartz sand in grain shape and in low angle of internal friction. In this study, we compared the structural characteristics of microbeads and sand wedges. To obtain a better picture of their mechanical behavior, we determined the physical and frictional properties of microbeads using polarizing and scanning electron microscopy and ring-shear tests, respectively. We built shortening experiments with different basal frictions and measured the thickness, slope and length of the wedges and also the fault spacings. All the microbeads experiments revealed wedge geometries that were consistent with previous studies that have been performed with sand. However, the deformation features in the microbeads shortened over low to intermediate basal frictions were slightly different. Microbeads produced different fault geometries than sand as well as a different grain flow. In addition, they produced slip on minor faults, which was associated with distributed deformation and gave the microbeads wedges the appearance of disharmonic folds. We concluded that the glass microbeads may be used to simulate relatively competent rocks, like carbonates, which may be characterized by small-scale deformation features.

  19. Reliability of analog quantum simulation

    DOE PAGES

    Sarovar, Mohan; Zhang, Jun; Zeng, Lishan

    2017-01-03

    Analog quantum simulators (AQS) will likely be the first nontrivial application of quantum technology for predictive simulation. However, there remain questions regarding the degree of confidence that can be placed in the results of AQS since they do not naturally incorporate error correction. Specifically, how do we know whether an analog simulation of a quantum model will produce predictions that agree with the ideal model in the presence of inevitable imperfections? At the same time there is a widely held expectation that certain quantum simulation questions will be robust to errors and perturbations in the underlying hardware. Resolving these twomore » points of view is a critical step in making the most of this promising technology. In this paper we formalize the notion of AQS reliability by determining sensitivity of AQS outputs to underlying parameters, and formulate conditions for robust simulation. Our approach naturally reveals the importance of model symmetries in dictating the robust properties. Finally, to demonstrate the approach, we characterize the robust features of a variety of quantum many-body models.« less

  20. IADE: a system for intelligent automatic design of bioisosteric analogs

    NASA Astrophysics Data System (ADS)

    Ertl, Peter; Lewis, Richard

    2012-11-01

    IADE, a software system supporting molecular modellers through the automatic design of non-classical bioisosteric analogs, scaffold hopping and fragment growing, is presented. The program combines sophisticated cheminformatics functionalities for constructing novel analogs and filtering them based on their drug-likeness and synthetic accessibility using automatic structure-based design capabilities: the best candidates are selected according to their similarity to the template ligand and to their interactions with the protein binding site. IADE works in an iterative manner, improving the fitness of designed molecules in every generation until structures with optimal properties are identified. The program frees molecular modellers from routine, repetitive tasks, allowing them to focus on analysis and evaluation of the automatically designed analogs, considerably enhancing their work efficiency as well as the area of chemical space that can be covered. The performance of IADE is illustrated through a case study of the design of a nonclassical bioisosteric analog of a farnesyltransferase inhibitor—an analog that has won a recent "Design a Molecule" competition.

  1. IADE: a system for intelligent automatic design of bioisosteric analogs.

    PubMed

    Ertl, Peter; Lewis, Richard

    2012-11-01

    IADE, a software system supporting molecular modellers through the automatic design of non-classical bioisosteric analogs, scaffold hopping and fragment growing, is presented. The program combines sophisticated cheminformatics functionalities for constructing novel analogs and filtering them based on their drug-likeness and synthetic accessibility using automatic structure-based design capabilities: the best candidates are selected according to their similarity to the template ligand and to their interactions with the protein binding site. IADE works in an iterative manner, improving the fitness of designed molecules in every generation until structures with optimal properties are identified. The program frees molecular modellers from routine, repetitive tasks, allowing them to focus on analysis and evaluation of the automatically designed analogs, considerably enhancing their work efficiency as well as the area of chemical space that can be covered. The performance of IADE is illustrated through a case study of the design of a nonclassical bioisosteric analog of a farnesyltransferase inhibitor--an analog that has won a recent "Design a Molecule" competition.

  2. Analog modeling of the deformation and kinematics of the Calabrian accretionary wedge

    NASA Astrophysics Data System (ADS)

    Dellong, David; Gutscher, Marc-Andre; Klingelhoefer, Frauke; Graindorge, David; Kopp, Heidrun; Mercier de Lepinay, Bernard; Dominguez, Stephane; Malavieille, Jacques

    2017-04-01

    The Calabrian accretionary wedge in the Ionian Sea, is the site of slow, deformation related to the overall convergence between Africa and Eurasia and the subduction zone beneath Calabria. High-resolution swath bathymetric data and seismic profiling image a complex network of compressional and strike-slip structures. Major Mesozoic rift structures (Malta Escarpment) are also present and appear to be reactivated in places by normal faulting. Ongoing normal faulting also occurs in the straits of Messina area (1908 M7.2 earthquake). We applied analog modeling using granular materials as well as ductile (silicone) in some experiments. The objective was to test the predictions of certain kinematic models regarding the location and kinematics of a major lateral slab edge tear fault. One experiment, using two independently moving backstops, demonstrates that the relative kinematics of the Calabrian and Peloritan blocks can produce a zone of dextral transtension and subsidence which corresponds well to the asymmetric rift observed in seismic data in the southward prolongation of the straits of Messina faults. However, the expected dextral offset in the deformation front of the accretionary wedge is not observed in bathymetry. In fact sinistral motion is observed along the boundary between two lobes of the accretionary wedge suggesting the dextral motion is absorbed along a network of transcurrent faults within the eastern lobe. Bathymetric and seismic observations indicate that the major dextral boundary along the western boundary of the accretionary wedge is the Alfeo fault system, whose southern termination is the focal point of a striking set of radial slip-lines. Further analog modeling experiments attempted to reproduce these structures, with mixed results.

  3. Community Decadal Panel for Terrestrial Analogs to Mars

    NASA Astrophysics Data System (ADS)

    Barlow, N. G.; Farr, T.; Baker, V. R.; Bridges, N.; Carsey, F.; Duxbury, N.; Gilmore, M. S.; Green, J. R.; Grin, E.; Hansen, V.; Keszthelyi, L.; Lanagan, P.; Lentz, R.; Marinangeli, L.; Morris, P. A.; Ori, G. G.; Paillou, P.; Robinson, C.; Thomson, B.

    2001-11-01

    It is well recognized that interpretations of Mars must begin with the Earth as a reference. The most successful comparisons have focused on understanding geologic processes on the Earth well enough to extrapolate to Mars' environment. Several facets of terrestrial analog studies have been pursued and are continuing. These studies include field workshops, characterization of terrestrial analog sites for Mars, instrument tests, laboratory measurements (including analysis of martian meteorites), and computer and laboratory modeling. The combination of all these activities allows scientists to constrain the processes operating in specific terrestrial environments and extrapolate how similar processes could affect Mars. The Terrestrial Analogs for Mars Community Panel is considering the following two key questions: (1) How do terrestrial analog studies tie in to the MEPAG science questions about life, past climate, and geologic evolution of Mars, and (2) How can future instrumentation be used to address these questions. The panel is considering the issues of data collection, value of field workshops, data archiving, laboratory measurements and modeling, human exploration issues, association with other areas of solar system exploration, and education and public outreach activities.

  4. Molecular dynamics in drug design: new generations of compstatin analogs.

    PubMed

    Tamamis, Phanourios; López de Victoria, Aliana; Gorham, Ronald D; Bellows-Peterson, Meghan L; Pierou, Panayiota; Floudas, Christodoulos A; Morikis, Dimitrios; Archontis, Georgios

    2012-05-01

    We report the computational and rational design of new generations of potential peptide-based inhibitors of the complement protein C3 from the compstatin family. The binding efficacy of the peptides is tested by extensive molecular dynamics-based structural and physicochemical analysis, using 32 atomic detail trajectories in explicit water for 22 peptides bound to human, rat or mouse target protein C3, with a total of 257 ns. The criteria for the new design are: (i) optimization for C3 affinity and for the balance between hydrophobicity and polarity to improve solubility compared to known compstatin analogs; and (ii) development of dual specificity, human-rat/mouse C3 inhibitors, which could be used in animal disease models. Three of the new analogs are analyzed in more detail as they possess strong and novel binding characteristics and are promising candidates for further optimization. This work paves the way for the development of an improved therapeutic for age-related macular degeneration, and other complement system-mediated diseases, compared to known compstatin variants. © 2012 John Wiley & Sons A/S.

  5. Analogical Scaffolding and the Learning of Abstract Ideas in Physics: An Example from Electromagnetic Waves

    ERIC Educational Resources Information Center

    Podolefsky, Noah S.; Finkelstein, Noah D.

    2007-01-01

    This paper describes a model of analogy, analogical scaffolding, which explains present and prior results of student learning with analogies. We build on prior models of representation, blending, and layering of ideas. Extending this model's explanatory power, we propose ways in which the model can be applied to design a curriculum directed at…

  6. Nonvolatile Analog Memory

    NASA Technical Reports Server (NTRS)

    MacLeod, Todd C. (Inventor)

    2007-01-01

    A nonvolatile analog memory uses pairs of ferroelectric field effect transistors (FFETs). Each pair is defined by a first FFET and a second FFET. When an analog value is to be stored in one of the pairs, the first FFET has a saturation voltage applied thereto, and the second FFET has a storage voltage applied thereto that is indicative of the analog value. The saturation and storage voltages decay over time in accordance with a known decay function that is used to recover the original analog value when the pair of FFETs is read.

  7. On the interest of combining an analog model to a regression model for the adaptation of the downscaling link. Application to probabilistic prediction of precipitation over France.

    NASA Astrophysics Data System (ADS)

    Chardon, Jérémy; Hingray, Benoit; Favre, Anne-Catherine

    2016-04-01

    Scenarios of surface weather required for the impact studies have to be unbiased and adapted to the space and time scales of the considered hydro-systems. Hence, surface weather scenarios obtained from global climate models and/or numerical weather prediction models are not really appropriated. Outputs of these models have to be post-processed, which is often carried out thanks to Statistical Downscaling Methods (SDMs). Among those SDMs, approaches based on regression are often applied. For a given station, a regression link can be established between a set of large scale atmospheric predictors and the surface weather variable. These links are then used for the prediction of the latter. However, physical processes generating surface weather vary in time. This is well known for precipitation for instance. The most relevant predictors and the regression link are also likely to vary in time. A better prediction skill is thus classically obtained with a seasonal stratification of the data. Another strategy is to identify the most relevant predictor set and establish the regression link from dates that are similar - or analog - to the target date. In practice, these dates can be selected thanks to an analog model. In this study, we explore the possibility of improving the local performance of an analog model - where the analogy is applied to the geopotential heights 1000 and 500 hPa - using additional local scale predictors for the probabilistic prediction of the Safran precipitation over France. For each prediction day, the prediction is obtained from two GLM regression models - for both the occurrence and the quantity of precipitation - for which predictors and parameters are estimated from the analog dates. Firstly, the resulting combined model noticeably allows increasing the prediction performance by adapting the downscaling link for each prediction day. Secondly, the selected predictors for a given prediction depend on the large scale situation and on the

  8. Submarine Volcanic Eruptions and Potential Analogs for Venus

    NASA Technical Reports Server (NTRS)

    Wilson, L.; Mouginismark, P. J.; Fryer, P.; Gaddis, L. R.

    1985-01-01

    As part of an analysis program to better understand the diversity of volcanic processes on the terrestrial planets, an investigation of the volcanic landforms which exist on the Earth's ocean floor was initiated. In part, this analysis is focused toward gaining a better understanding of submarine volcanic landforms in their own right, but also it is hoped that these features may show similarities to volcanic landforms on Venus, due to the high ambient water (Earth) and atmospheric (Venus) pressures. A series of numerical modelling experiments was performed to investigate the relative importance of such attributes as water pressure and temperature on the eruption process, and to determine the rate of cooling and emplacement of lava flows in the submarine environment. Investigations to date show that the confining water pressure and the buoyancy effects of the surrounding water significantly affect the styles of volcanism on the ocean floor. In the case of Venusian volcanism, confining pressures will not be as great as that found at the ocean's abyssal plains, but nevertheless the general trend toward reducing magma vesiculation will hold true for Venus as well as the ocean floor. Furthermore, other analogs may also be found between submarine volcanism and Venusian activity.

  9. Ground-water models for water resource planning

    USGS Publications Warehouse

    Moore, J.E.

    1983-01-01

    In the past decade hydrogeologists have emphasized the development of computer-based mathematical models to aid in the understanding of flow, the transport of solutes, transport of heat, and deformation in the ground-water system. These models have been used to provide information and predictions for water managers. Too frequently, ground-water was neglected in water resource planning because managers believed that it could not be adequately evaluated in terms of availability, quality, and effect of development on surface-water supplies. Now, however, with newly developed digital ground-water models, effects of development can be predicted. Such models have been used to predict hydrologic and quality changes under different stresses. These models have grown in complexity over the last ten years from simple one-layer models to three-dimensional simulations of ground-water flow, which may include solute transport, heat transport, effects of land subsidence, and encroachment of saltwater. Case histories illustrate how predictive ground-water models have provided the information needed for the sound planning and management of water resources in the USA. ?? 1983 D. Reidel Publishing Company.

  10. The role of models/and analogies in science education: implications from research

    NASA Astrophysics Data System (ADS)

    Coll, Richard K.; France, Bev; Taylor, Ian

    2005-02-01

    Models and modelling are key tools for scientists, science teachers and science learners. In this paper we argue that classroom-based research evidence demonstrates that the use of models and analogies within the pedagogy of science education may provide a route for students to gain some understanding of the nature of science. A common theme to emerge from the literature reviewed here is that in order to successfully develop conceptual understandings in science, learners need to be able to reflect on and discuss their understandings of scientific concepts as they are developing them. Pedagogies that involve various types of modelling are most effective when students are able to construct and critique their own and scientists' models. Research also suggests that group work and peer discussion are important ways of enhancing students' cognitive and metacognitive thinking skills. Further we argue that an understanding of science models and the modelling process enables students to develop a metacognitive awareness of knowledge development within the science community, as well as providing the tools to reflect on their own scientific understanding.

  11. Visible and near-infrared reflectance spectroscopy of planetary analog materials. Experimental facility at Laboratoire de Planetologie de Grenoble.

    NASA Astrophysics Data System (ADS)

    Pommerol, A.; Brissaud, O.; Schmitt, B.; Quirico, E.; Doute, S.

    2007-08-01

    solid samples and samples diluted in KBr pellets, infrared imaging microscope, numerical modeling of bidirectional reflectance spectra using laboratory-measured optical constants. We will present different examples of experimental results obtained on the reflectance spectroscopy facility: - Effects of particle size, mixtures between samples with different albedo and measurement geometries on the water-of-hydration near-infrared absorption signatures with implications for the Martian regolith water content. - BRDF of regolith analogs and natural snow. - Hydration and dehydration of planetary analogs. - Spectra of different kinds of mixtures between water ice and minerals. We will briefly discuss the planetary implications of each of these measurements and detail the future investigations that will be undertaken on our experimental facility.

  12. Analysis of melamine and analogs in complex matrices: Advances and trends.

    PubMed

    Wang, Tingting; Ma, Junfeng; Chen, Yihui; Li, Ying; Zhang, Lihua; Zhang, Yukui

    2017-01-01

    The analysis of melamine and its analogs is of increasing research interest. Owing to their high nitrogen content and low price, they were deliberately added to artificially enhance protein concentration in a number of different types of human and animal food sources. In addition, environmental water might also be contaminated by melamine due to its use in the chemical industry and the degradation of the pesticide cyromazine. Herein we provide a detailed overview of recently developed materials and techniques for the analysis of melamine and its analogs in complex matrices, especially in dairy products (e.g., milk and powdered milk) and environmental water. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  13. Transition metal carbides, nitrides and borides, and their oxygen containing analogs useful as water gas shift catalysts

    DOEpatents

    Thompson, Levi T.; Patt, Jeremy; Moon, Dong Ju; Phillips, Cory

    2003-09-23

    Mono- and bimetallic transition metal carbides, nitrides and borides, and their oxygen containing analogs (e.g. oxycarbides) for use as water gas shift catalysts are described. In a preferred embodiment, the catalysts have the general formula of M1.sub.A M2.sub.B Z.sub.C O.sub.D, wherein M1 is selected from the group consisting of Mo, W, and combinations thereof; M2 is selected from the group consisting of Fe, Ni, Cu, Co, and combinations thereof; Z is selected from the group consisting of carbon, nitrogen, boron, and combinations thereof; A is an integer; B is 0 or an integer greater than 0; C is an integer; O is oxygen; and D is 0 or an integer greater than 0. The catalysts exhibit good reactivity, stability, and sulfur tolerance, as compared to conventional water shift gas catalysts. These catalysts hold promise for use in conjunction with proton exchange membrane fuel cell powered systems.

  14. Sustainability assessment through analogical models: The approach of aerobic living-organism

    NASA Astrophysics Data System (ADS)

    Dassisti, Michele

    2014-10-01

    The most part of scientific discoveries of human being borrow ideas and inspiration from nature. This point gives the rationale of the sustainability assessment approach presented here and based on the aerobic living organism (ALO) already developed by the author, which funds on the basic assumption that it is reasonable and effective to refer to the analogy between an system organized by human (say, manufacturing system, enterprise, etc.) for several decision-making scopes. The critical review of the ALO conceptual model already developed is here discussed through an example of an Italian small enterprise manufacturing metal components for civil furniture to assess its feasibility for sustainability appraisal.

  15. Probing Water Ice for Trace Organics using Raman Scattering in the Laboratory and Terrestrial Field Analogs

    NASA Astrophysics Data System (ADS)

    Winebrenner, D. P.; Kirby, J. P.; Marquardt, B.

    2013-12-01

    Trace constituents in (predominantly) water ice are key to understanding planetary and astrobiological processes on a wide variety of solar system bodies, including Europa, Enceladus, Titan, Ceres, Mars, and comets. Organic traces are of particular interest not only for astrobiology but also, for example, for understanding the fates of abiotic organics delivered by meteorites. Raman scattering is known for specificity in identifying bonds and compounds, but has generally been considered relatively insensitive to concentrations characteristic of trace constituents. Here we test in doped water ice a Raman probe system that was developed for industrial and environmental applications and that has characterized select traces at ppm-levels near a deep-sea hydrothermal vent. We report in particular results for 17 amino acids and for aromatic hydrocarbons. Finally, based on physically robust Raman optics developed for industrial environments, we proposal a concept for subsurface investigation of traces in terrestrial analog environments such as glaciers and ice sheets, by means of integrating a Raman probe with a thermal ice melt probe recently field-tested in Greenland.

  16. On the Role of Water Models in Quantifying the Binding Free Energy of Highly Conserved Water Molecules in Proteins: The Case of Concanavalin A.

    PubMed

    Fadda, Elisa; Woods, Robert J

    2011-10-11

    The ability of ligands to displace conserved water molecules in protein binding sites is of significant interest in drug design and is particularly pertinent in the case of glycomimetic drugs. This concept was explored in previous work [ Clarke et al. J. Am. Chem. Soc. 2001 , 123 , 12238 - 12247 and Kadirvelraj et al. J. Am. Chem. Soc. 2008 , 130 , 16933 - 16942 ] for a highly conserved water molecule located in the binding site of the prototypic carbohydrate-binding protein Concanavalin A (Con A). A synthetic ligand was designed with the aim of displacing such water. While the synthetic ligand bound to Con A in an analogous manner to that of the natural ligand, crystallographic analysis demonstrated that it did not displace the conserved water. In order to quantify the affinity of this particular water for the Con A surface, we report here the calculated standard binding free energy for this water in both ligand-bound and free Con A, employing three popular water models: TIP3P, TIP4P, and TIP5P. Although each model was developed to perform well in simulations of bulk-phase water, the computed binding energies for the isolated water molecule displayed a high sensitivity to the model. Both molecular dynamics simulation and free energy results indicate that the choice of water model may greatly influence the characterization of surface water molecules as conserved (TIP5P) or not (TIP3P) in protein binding sites, an observation of considerable significance to rational drug design. Structural and theoretical aspects at the basis of the different behaviors are identified and discussed.

  17. Elucidating the neurotoxic effects of MDMA and its analogs.

    PubMed

    Karuppagounder, Senthilkumar S; Bhattacharya, Dwipayan; Ahuja, Manuj; Suppiramaniam, Vishnu; Deruiter, Jack; Clark, Randall; Dhanasekaran, Muralikrishnan

    2014-04-17

    There is a rapid increase in the use of methylenedioxymethamphetamine (MDMA) and its structural congeners/analogs globally. MDMA and MDMA-analogs have been synthesized illegally in furtive dwellings and are abused due to its addictive potential. Furthermore, MDMA and MDMA-analogs have shown to have induced several adverse effects. Hence, understanding the mechanisms mediating this neurotoxic insult of MDMA-analogs is of immense importance for the public health in the world. We synthesized and investigated the neurotoxic effects of MDMA and its analogs [4-methylenedioxyamphetamine (MDA), 2, 6-methylenedioxyamphetamine (MDMA), and N-ethyl-3, 4-methylenedioxyamphetamine (MDEA)]. The stimulatory or the dopaminergic agonist effects of MDMA and MDMA-analogs were elucidated using the established 6-hydroxydopamine lesioned animal model. Additionally, we also investigated the neurotoxic mechanisms of MDMA and MDMA-analogs on mitochondrial complex-I activity and reactive oxygen species generation. MDMA and MDMA-analogs exhibited stimulatory activity as compared to amphetamines and also induced several behavioral changes in the rodents. MDMA and MDMA-analogs enhanced the reactive oxygen generation and inhibited mitochondrial complex-I activity which can lead to neurodegeneration. Hence the mechanism of neurotoxicity, MDMA and MDMA-analogs can enhance the release of monoamines, alter the monoaminergic neurotransmission, and augment oxidative stress and mitochondrial abnormalities leading to neurotoxicity. Thus, our study will help in developing effective pharmacological and therapeutic approaches for the treatment of MDMA and MDMA-analog abuse. Copyright © 2014 Elsevier Inc. All rights reserved.

  18. Relating Derived Relations as a Model of Analogical Reasoning: Reaction Times and Event-Related Potentials

    ERIC Educational Resources Information Center

    Barnes-Holmes, Dermot; Regan, Donal; Barnes-Holmes, Yvonne; Commins, Sean; Walsh, Derek; Stewart, Ian; Smeets, Paul M.; Whelan, Robert; Dymond, Simon

    2005-01-01

    The current study aimed to test a Relational Frame Theory (RFT) model of analogical reasoning based on the relating of derived same and derived difference relations. Experiment 1 recorded reaction time measures of similar-similar (e.g., "apple is to orange as dog is to cat") versus different-different (e.g., "he is to his brother as…

  19. New size-expanded RNA nucleobase analogs: a detailed theoretical study.

    PubMed

    Zhang, Laibin; Zhang, Zhenwei; Ren, Tingqi; Tian, Jianxiang; Wang, Mei

    2015-04-05

    Fluorescent nucleobase analogs have attracted much attention in recent years due to their potential applications in nucleic acids research. In this work, four new size-expanded RNA base analogs were computationally designed and their structural, electronic, and optical properties are investigated by means of DFT calculations. The results indicate that these analogs can form stable Watson-Crick base pairs with natural counterparts and they have smaller ionization potentials and HOMO-LUMO gaps than natural ones. Particularly, the electronic absorption spectra and fluorescent emission spectra are calculated. The calculated excitation maxima are greatly red-shifted compared with their parental and natural bases, allowing them to be selectively excited. In gas phase, the fluorescence from them would be expected to occur around 526, 489, 510, and 462 nm, respectively. The influences of water solution and base pairing on the relevant absorption spectra of these base analogs are also examined. Copyright © 2015 Elsevier B.V. All rights reserved.

  20. A case study analysing the process of analogy-based learning in a teaching unit about simple electric circuits

    NASA Astrophysics Data System (ADS)

    Paatz, Roland; Ryder, James; Schwedes, Hannelore; Scott, Philip

    2004-09-01

    The purpose of this case study is to analyse the learning processes of a 16-year-old student as she learns about simple electric circuits in response to an analogy-based teaching sequence. Analogical thinking processes are modelled by a sequence of four steps according to Gentner's structure mapping theory (activate base domain, postulate local matches, connect them to a global match, draw candidate inferences). We consider whether Gentner's theory can be used to account for the details of this specific teaching/learning context. The case study involved video-taping teaching and learning activities in a 10th-grade high school course in Germany. Teaching used water flow through pipes as an analogy for electrical circuits. Using Gentner's theory, relational nets were created from the student's statements at different stages of her learning. Overall, these nets reflect the four steps outlined earlier. We also consider to what extent the learning processes revealed by this case study are different from previous analyses of contexts in which no analogical knowledge is available.

  1. Electric Circuit Model Analogy for Equilibrium Lattice Relaxation in Semiconductor Heterostructures

    NASA Astrophysics Data System (ADS)

    Kujofsa, Tedi; Ayers, John E.

    2018-01-01

    The design and analysis of semiconductor strained-layer device structures require an understanding of the equilibrium profiles of strain and dislocations associated with mismatched epitaxy. Although it has been shown that the equilibrium configuration for a general semiconductor strained-layer structure may be found numerically by energy minimization using an appropriate partitioning of the structure into sublayers, such an approach is computationally intense and non-intuitive. We have therefore developed a simple electric circuit model approach for the equilibrium analysis of these structures. In it, each sublayer of an epitaxial stack may be represented by an analogous circuit configuration involving an independent current source, a resistor, an independent voltage source, and an ideal diode. A multilayered structure may be built up by the connection of the appropriate number of these building blocks, and the node voltages in the analogous electric circuit correspond to the equilibrium strains in the original epitaxial structure. This enables analysis using widely accessible circuit simulators, and an intuitive understanding of electric circuits can easily be extended to the relaxation of strained-layer structures. Furthermore, the electrical circuit model may be extended to continuously-graded epitaxial layers by considering the limit as the individual sublayer thicknesses are diminished to zero. In this paper, we describe the mathematical foundation of the electrical circuit model, demonstrate its application to several representative structures involving In x Ga1- x As strained layers on GaAs (001) substrates, and develop its extension to continuously-graded layers. This extension allows the development of analytical expressions for the strain, misfit dislocation density, critical layer thickness and widths of misfit dislocation free zones for a continuously-graded layer having an arbitrary compositional profile. It is similar to the transition from circuit

  2. Echo Source Discrimination in Airborne Radar Sounding Data for Mars Analog Studies, Dry Valleys, Antarctica

    NASA Technical Reports Server (NTRS)

    Holt, J. W.; Blankenship, D. D.; Peters, M. E.; Kempf, S. D.; Morse, D. L.; Williams, B. J.

    2003-01-01

    The recent identification of features on Mars exhibiting morphologies consistent with ice/rock mixtures, near-surface ice bodies and near-surface liquid water [1,2], and the importance of such features to the search for water on Mars, highlights the need for appropriate terrestrial analogs in order to prepare for upcoming radar missions targeting these and other water-related features. Climatic, hydrological, and geological conditions in the McMurdo Dry Valleys of Antarctica are analogous in many ways to those on Mars, and a number of ice-related features in the Dry Valleys may have direct morphologic and compositional counterparts on Mars.

  3. Analog Signal Correlating Using an Analog-Based Signal Conditioning Front End

    NASA Technical Reports Server (NTRS)

    Prokop, Norman; Krasowski, Michael

    2013-01-01

    This innovation is capable of correlating two analog signals by using an analog-based signal conditioning front end to hard-limit the analog signals through adaptive thresholding into a binary bit stream, then performing the correlation using a Hamming "similarity" calculator function embedded in a one-bit digital correlator (OBDC). By converting the analog signal into a bit stream, the calculation of the correlation function is simplified, and less hardware resources are needed. This binary representation allows the hardware to move from a DSP where instructions are performed serially, into digital logic where calculations can be performed in parallel, greatly speeding up calculations.

  4. Simplified contaminant source depletion models as analogs of multiphase simulators

    NASA Astrophysics Data System (ADS)

    Basu, Nandita B.; Fure, Adrian D.; Jawitz, James W.

    2008-04-01

    Four simplified dense non-aqueous phase liquid (DNAPL) source depletion models recently introduced in the literature are evaluated for the prediction of long-term effects of source depletion under natural gradient flow. These models are simple in form (a power function equation is an example) but are shown here to serve as mathematical analogs to complex multiphase flow and transport simulators. The spill and subsequent dissolution of DNAPLs was simulated in domains having different hydrologic characteristics (variance of the log conductivity field = 0.2, 1 and 3) using the multiphase flow and transport simulator UTCHEM. The dissolution profiles were fitted using four analytical models: the equilibrium streamtube model (ESM), the advection dispersion model (ADM), the power law model (PLM) and the Damkohler number model (DaM). All four models, though very different in their conceptualization, include two basic parameters that describe the mean DNAPL mass and the joint variability in the velocity and DNAPL distributions. The variability parameter was observed to be strongly correlated with the variance of the log conductivity field in the ESM and ADM but weakly correlated in the PLM and DaM. The DaM also includes a third parameter that describes the effect of rate-limited dissolution, but here this parameter was held constant as the numerical simulations were found to be insensitive to local-scale mass transfer. All four models were able to emulate the characteristics of the dissolution profiles generated from the complex numerical simulator, but the one-parameter PLM fits were the poorest, especially for the low heterogeneity case.

  5. Simplified contaminant source depletion models as analogs of multiphase simulators.

    PubMed

    Basu, Nandita B; Fure, Adrian D; Jawitz, James W

    2008-04-28

    Four simplified dense non-aqueous phase liquid (DNAPL) source depletion models recently introduced in the literature are evaluated for the prediction of long-term effects of source depletion under natural gradient flow. These models are simple in form (a power function equation is an example) but are shown here to serve as mathematical analogs to complex multiphase flow and transport simulators. The spill and subsequent dissolution of DNAPLs was simulated in domains having different hydrologic characteristics (variance of the log conductivity field=0.2, 1 and 3) using the multiphase flow and transport simulator UTCHEM. The dissolution profiles were fitted using four analytical models: the equilibrium streamtube model (ESM), the advection dispersion model (ADM), the power law model (PLM) and the Damkohler number model (DaM). All four models, though very different in their conceptualization, include two basic parameters that describe the mean DNAPL mass and the joint variability in the velocity and DNAPL distributions. The variability parameter was observed to be strongly correlated with the variance of the log conductivity field in the ESM and ADM but weakly correlated in the PLM and DaM. The DaM also includes a third parameter that describes the effect of rate-limited dissolution, but here this parameter was held constant as the numerical simulations were found to be insensitive to local-scale mass transfer. All four models were able to emulate the characteristics of the dissolution profiles generated from the complex numerical simulator, but the one-parameter PLM fits were the poorest, especially for the low heterogeneity case.

  6. Electrostatic analogy for symmetron gravity

    NASA Astrophysics Data System (ADS)

    Ogden, Lillie; Brown, Katherine; Mathur, Harsh; Rovelli, Kevin

    2017-12-01

    The symmetron model is a scalar-tensor theory of gravity with a screening mechanism that suppresses the effect of the symmetron field at high densities characteristic of the Solar System and laboratory scales but allows it to act with gravitational strength at low density on the cosmological scale. We elucidate the screening mechanism by showing that in the quasistatic Newtonian limit there are precise analogies between symmetron gravity and electrostatics for both strong and weak screening. For strong screening we find that large dense bodies behave in a manner analogous to perfect conductors in electrostatics. Based on this analogy we find that the symmetron field exhibits a lightning rod effect wherein the field gradients are enhanced near the ends of pointed or elongated objects. An ellipsoid placed in a uniform symmetron gradient is shown to experience a torque. By symmetry there is no gravitational torque in this case. Hence this effect unmasks the symmetron and might serve as the basis for future laboratory experiments. The symmetron force between a point mass and a large dense body includes a component corresponding to the interaction of the point mass with its image in the larger body. None of these effects have counterparts in the Newtonian limit of Einstein gravity. We discuss the similarities between symmetron gravity and the chameleon model as well as the differences between the two.

  7. Qualitative Differences in Real-Time Solution of Standardized Figural Analogies.

    ERIC Educational Resources Information Center

    Schiano, Diane J.; And Others

    Performance on standardized figural analogy tests is considered highly predictive of academic success. While information-processing models of analogy solution attribute performance differences to quantitative differences in processing parameters, the problem-solving literature suggests that qualitative differences in problem representation and…

  8. Implementation of structure-mapping inference by event-file binding and action planning: a model of tool-improvisation analogies.

    PubMed

    Fields, Chris

    2011-03-01

    Structure-mapping inferences are generally regarded as dependent upon relational concepts that are understood and expressible in language by subjects capable of analogical reasoning. However, tool-improvisation inferences are executed by members of a variety of non-human primate and other species. Tool improvisation requires correctly inferring the motion and force-transfer affordances of an object; hence tool improvisation requires structure mapping driven by relational properties. Observational and experimental evidence can be interpreted to indicate that structure-mapping analogies in tool improvisation are implemented by multi-step manipulation of event files by binding and action-planning mechanisms that act in a language-independent manner. A functional model of language-independent event-file manipulations that implement structure mapping in the tool-improvisation domain is developed. This model provides a mechanism by which motion and force representations commonly employed in tool-improvisation structure mappings may be sufficiently reinforced to be available to inwardly directed attention and hence conceptualization. Predictions and potential experimental tests of this model are outlined.

  9. The Efficacy of Interactive Analogical Models in the Instruction of Bond Energy Curves in Undergraduate Chemistry

    ERIC Educational Resources Information Center

    Shahani, Vijay M.; Jenkinson, Jodie

    2016-01-01

    We explored analogies used for introducing students to the concept of potential energy wells. Two analogy systems were developed, a spring system and a novel system consisting of electrostatic spheres. These two, distinct analogies were housed within an interactive tool that allowed students to manipulate the analogous systems and witness changes…

  10. A Comparison between Physics-based and Polytropic MHD Models for Stellar Coronae and Stellar Winds of Solar Analogs

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cohen, O.

    The development of the Zeeman–Doppler Imaging (ZDI) technique has provided synoptic observations of surface magnetic fields of low-mass stars. This led the stellar astrophysics community to adopt modeling techniques that have been used in solar physics using solar magnetograms. However, many of these techniques have been neglected by the solar community due to their failure to reproduce solar observations. Nevertheless, some of these techniques are still used to simulate the coronae and winds of solar analogs. Here we present a comparative study between two MHD models for the solar corona and solar wind. The first type of model is amore » polytropic wind model, and the second is the physics-based AWSOM model. We show that while the AWSOM model consistently reproduces many solar observations, the polytropic model fails to reproduce many of them, and in the cases where it does, its solutions are unphysical. Our recommendation is that polytropic models, which are used to estimate mass-loss rates and other parameters of solar analogs, must first be calibrated with solar observations. Alternatively, these models can be calibrated with models that capture more detailed physics of the solar corona (such as the AWSOM model) and that can reproduce solar observations in a consistent manner. Without such a calibration, the results of the polytropic models cannot be validated, but they can be wrongly used by others.« less

  11. Electrical Evolution of a Dust Plume from a Low Energy Lunar Impact: A Model Analog to LCROSS

    NASA Technical Reports Server (NTRS)

    Farrell, W. M.; Stubbs, T. J.; Jackson, T. L.; Colaprete, A.; Heldmann, J. L.; Schultz, P. H.; Killen, R. M.; Delory, G. T.; Halekas, J. S.; Marshall, J. R.; hide

    2011-01-01

    A Monte Carlo test particle model was developed that simulates the charge evolution of micron and sub-micron sized dust grains ejected upon low-energy impact of a moderate-size object onto a lunar polar crater floor. Our analog is the LCROSS impact into Cabeus crater. Our primary objective is to model grain discharging as the plume propagates upwards from shadowed crater into sunlight.

  12. Promoting Learning through the Use of Analogies in High School Biology Textbooks.

    ERIC Educational Resources Information Center

    Radford, David L.

    A model for developing instructional analogies was used to produce experimental treatments that included text from a high school biology textbook to which was added extended verbal analogies written by the researcher linking each of two biology concepts to analogous familiar concepts. The control treatment was text from the biology textbook…

  13. Periglacial and glacial analogs for Martian landforms

    NASA Technical Reports Server (NTRS)

    Rossbacher, Lisa A.

    1992-01-01

    The list of useful terrestrial analogs for Martian landforms has been expanded to include: features developed by desiccation processes; catastrophic flood features associated with boulder-sized materials; and sorted ground developed at a density boundary. Quantitative analytical techniques developed for physical geography have been adapted and applied to planetary studies, including: quantification of the patterns of polygonally fractured ground to describe pattern randomness independent of pattern size, with possible correlation to the mechanism of origin and quantification of the relative area of a geomorphic feature or region in comparison to planetary scale. Information about Martian geomorphology studied in this project was presented at professional meetings world-wide, at seven colleges and universities, in two interactive televised courses, and as part of two books. Overall, this project has expanded the understanding of the range of terrestrial analogs for Martian landforms, including identifying several new analogs. The processes that created these terrestrial features are characterized by both cold temperatures and low humidity, and therefore both freeze-thaw and desiccation processes are important. All these results support the conclusion that water has played a significant role in the geomorphic history of Mars.

  14. Evaluation of the Therapeutic Potential of a CNP Analog in a Fgfr3 Mouse Model Recapitulating Achondroplasia

    PubMed Central

    Lorget, Florence; Kaci, Nabil; Peng, Jeff; Benoist-Lasselin, Catherine; Mugniery, Emilie; Oppeneer, Todd; Wendt, Dan J.; Bell, Sean M.; Bullens, Sherry; Bunting, Stuart; Tsuruda, Laurie S.; O'Neill, Charles A.; Di Rocco, Federico; Munnich, Arnold; Legeai-Mallet, Laurence

    2012-01-01

    Achondroplasia (ACH), the most common form of dwarfism, is an inherited autosomal-dominant chondrodysplasia caused by a gain-of-function mutation in fibroblast-growth-factor-receptor 3 (FGFR3). C-type natriuretic peptide (CNP) antagonizes FGFR3 downstream signaling by inhibiting the pathway of mitogen-activated protein kinase (MAPK). Here, we report the pharmacological activity of a 39 amino acid CNP analog (BMN 111) with an extended plasma half-life due to its resistance to neutral-endopeptidase (NEP) digestion. In ACH human growth-plate chondrocytes, we demonstrated a decrease in the phosphorylation of extracellular-signal-regulated kinases 1 and 2, confirming that this CNP analog inhibits fibroblast-growth-factor-mediated MAPK activation. Concomitantly, we analyzed the phenotype of Fgfr3Y367C/+ mice and showed the presence of ACH-related clinical features in this mouse model. We found that in Fgfr3Y367C/+ mice, treatment with this CNP analog led to a significant recovery of bone growth. We observed an increase in the axial and appendicular skeleton lengths, and improvements in dwarfism-related clinical features included flattening of the skull, reduced crossbite, straightening of the tibias and femurs, and correction of the growth-plate defect. Thus, our results provide the proof of concept that BMN 111, a NEP-resistant CNP analog, might benefit individuals with ACH and hypochondroplasia. PMID:23200862

  15. Analogy for Drude's free electron model to promote students' understanding of electric circuits in lower secondary school

    NASA Astrophysics Data System (ADS)

    de Almeida, Maria José BM; Salvador, Andreia; Costa, Maria Margarida RR

    2014-12-01

    Aiming at a deep understanding of some basic concepts of electric circuits in lower secondary schools, this work introduces an analogy between the behavior of children playing in a school yard with a central lake, subject to different conditions, rules, and stimuli, and Drude's free electron model of metals. Using this analogy from the first school contacts with electric phenomena, one can promote students' understanding of concepts such as electric current, the role of generators, potential difference effects, energy transfer, open and closed circuits, resistances, and their combinations in series and parallel. One believes that through this analogy well-known previous misconceptions of young students about electric circuit behaviors can be overcome. Furthermore, students' understanding will enable them to predict, and justify with self-constructed arguments, the behavior of different elementary circuits. The students' predictions can be verified—as a challenge of self-produced understanding schemes—using laboratory experiments. At a preliminary stage, our previsions were confirmed through a pilot study with three classrooms of 9th level Portuguese students.

  16. Novel C-1 Substituted Cocaine Analogs Unlike Cocaine or Benztropine

    PubMed Central

    Ali, Solav; Hashim, Audrey; Sheikh, Imran S.; Theddu, Naresh; Gaddiraju, Narendra V.; Mehrotra, Suneet; Schmitt, Kyle C.; Murray, Thomas F.; Sershen, Henry; Unterwald, Ellen M.; Davis, Franklin A.

    2012-01-01

    Despite a wealth of information on cocaine-like compounds, there is no information on cocaine analogs with substitutions at C-1. Here, we report on (R)-(−)-cocaine analogs with various C-1 substituents: methyl (2), ethyl (3), n-propyl (4), n-pentyl (5), and phenyl (6). Analog 2 was equipotent to cocaine as an inhibitor of the dopamine transporter (DAT), whereas 3 and 6 were 3- and 10-fold more potent, respectively. None of the analogs, however, stimulated mouse locomotor activity, in contrast to cocaine. Pharmacokinetic assays showed compound 2 occupied mouse brain rapidly, as cocaine itself; moreover, 2 and 6 were behaviorally active in mice in the forced-swim test model of depression and the conditioned place preference test. Analog 2 was a weaker inhibitor of voltage-dependent Na+ channels than cocaine, although 6 was more potent than cocaine, highlighting the need to assay future C-1 analogs for this activity. Receptorome screening indicated few significant binding targets other than the monoamine transporters. Benztropine-like “atypical” DAT inhibitors are known to display reduced cocaine-like locomotor stimulation, presumably by their propensity to interact with an inward-facing transporter conformation. However, 2 and 6, like cocaine, but unlike benztropine, exhibited preferential interaction with an outward-facing conformation upon docking in our DAT homology model. In summary, C-1 cocaine analogs are not cocaine-like in that they are not stimulatory in vivo. However, they are not benztropine-like in binding mechanism and seem to interact with the DAT similarly to cocaine. The present data warrant further consideration of these novel cocaine analogs for antidepressant or cocaine substitution potential. PMID:22895898

  17. Bayesian Analogy with Relational Transformations

    ERIC Educational Resources Information Center

    Lu, Hongjing; Chen, Dawn; Holyoak, Keith J.

    2012-01-01

    How can humans acquire relational representations that enable analogical inference and other forms of high-level reasoning? Using comparative relations as a model domain, we explore the possibility that bottom-up learning mechanisms applied to objects coded as feature vectors can yield representations of relations sufficient to solve analogy…

  18. Application of the Analog Method to Modelling Heat Waves: A Case Study with Power Transformers

    DTIC Science & Technology

    2017-04-21

    UNCLASSIFIED Massachusetts Institute of Technology Lincoln Laboratory APPLICATION OF THE ANALOG METHOD TO MODELLING HEAT WAVES: A CASE STUDY WITH...18 2 Calibration and validation statistics with the use of five atmospheric vari- ables to construct analogue diagnostics for JJA of transformer T2...electrical grid as a series of nodes (transformers) and edges (transmission lines) so that basic mathematical anal- ysis can be performed. The mathematics

  19. Characterization and Modeling of Nonfilamentary Ta/TaOx/TiO2/Ti Analog Synaptic Device

    PubMed Central

    Wang, Yu-Fen; Lin, Yen-Chuan; Wang, I-Ting; Lin, Tzu-Ping; Hou, Tuo-Hung

    2015-01-01

    A two-terminal analog synaptic device that precisely emulates biological synaptic features is expected to be a critical component for future hardware-based neuromorphic computing. Typical synaptic devices based on filamentary resistive switching face severe limitations on the implementation of concurrent inhibitory and excitatory synapses with low conductance and state fluctuation. For overcoming these limitations, we propose a Ta/TaOx/TiO2/Ti device with superior analog synaptic features. A physical simulation based on the homogeneous (nonfilamentary) barrier modulation induced by oxygen ion migration accurately reproduces various DC and AC evolutions of synaptic states, including the spike-timing-dependent plasticity and paired-pulse facilitation. Furthermore, a physics-based compact model for facilitating circuit-level design is proposed on the basis of the general definition of memristor devices. This comprehensive experimental and theoretical study of the promising electronic synapse can facilitate realizing large-scale neuromorphic systems. PMID:25955658

  20. The scattering analog for infiltration in porous media

    NASA Astrophysics Data System (ADS)

    Philip, J. R.

    1989-11-01

    This review takes the form of a set of Chinese boxes. The outermost box gives a brief general account of modem developments in the mathematical physics of unsaturated flow in soils and porous media. This provides the necessary foundations for the second box, which describes the quasi-linear analysis of steady multidimensional unsaturated flow, which is an essential prerequisite to the analog. Only then can we proceed to the innermost box, devoted to our major theme. An exact analog exists between steady quasi-linear flow in unsaturated soils and porous media and the scattering of plane pulses, and the analog carries over to the scattering of plane harmonic waves. Numerous established results, and powerful techniques such as Watson transforms, far-field scattering functions, and optical theorems, become available for the solution and understanding of problems of multidimensional infiltration. These are needed, in particular, to provide the asymptotics of the physically interesting and practically important limit of flows strongly dominated by gravity, with capillary effects weak but nonzero. This is the limit of large s, where s is a characteristic length of the water supply surface normalized with respect to the sorptive length of the soil. These problems are singular in the sense that ignoring capillarity gives a totally incorrect picture of the wetted region. In terms of the optical analog, neglecting capillarity is equivalent to using geometrical optics, with coherent shadows projected to infinity. When exact solutions involve exotic functions, difficulties of both analysis and series summation may be avoided through use of small-s and large-s expansions provided by the analog. Numerous examples are given of solutions obtained through the analog. The scope for extending the application to flows from surface sources, to anisotropic and heterogeneous media, to unsteady flows, and to linear convection-diffusion processes in general is described briefly.

  1. Comparing administered and market-based water allocation systems through a consistent agent-based modeling framework.

    PubMed

    Zhao, Jianshi; Cai, Ximing; Wang, Zhongjing

    2013-07-15

    Water allocation can be undertaken through administered systems (AS), market-based systems (MS), or a combination of the two. The debate on the performance of the two systems has lasted for decades but still calls for attention in both research and practice. This paper compares water users' behavior under AS and MS through a consistent agent-based modeling framework for water allocation analysis that incorporates variables particular to both MS (e.g., water trade and trading prices) and AS (water use violations and penalties/subsidies). Analogous to the economic theory of water markets under MS, the theory of rational violation justifies the exchange of entitled water under AS through the use of cross-subsidies. Under water stress conditions, a unique water allocation equilibrium can be achieved by following a simple bargaining rule that does not depend upon initial market prices under MS, or initial economic incentives under AS. The modeling analysis shows that the behavior of water users (agents) depends on transaction, or administrative, costs, as well as their autonomy. Reducing transaction costs under MS or administrative costs under AS will mitigate the effect that equity constraints (originating with primary water allocation) have on the system's total net economic benefits. Moreover, hydrologic uncertainty is shown to increase market prices under MS and penalties/subsidies under AS and, in most cases, also increases transaction, or administrative, costs. Copyright © 2013 Elsevier Ltd. All rights reserved.

  2. Laboratory investigations of Mars - Chemical and spectroscopic characteristics of a suite of clays as Mars soil analogs

    NASA Technical Reports Server (NTRS)

    Banin, Amos; Carle, Glenn C.; Chang, Sherwood; Coyne, Lelia M.; Orenberg, James B.

    1988-01-01

    A model system of Mars soil analog materials (MSAMs) was prepared, and the properties of these clays, such as chemical composition, surface-ion composition, water adsorption isotherms, and reflectance spectra, were examined. The results of these studies, performed along with simulations of the Viking Labeled Release Experiement using MSAMs, indicate that surface iron and adsorbed water are important determinants of clay behavior, as evidenced by changes in reflectance, water absorption, and clay surface reactions. The paper discusses the relevance of these results to the two major questions raised by prior explorations of Mars: has there ever been abundant water on Mars, and why is the iron found in the Martian soil not readily seen in the reflectance spectra of the surface?

  3. Analog earthquakes

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hofmann, R.B.

    1995-09-01

    Analogs are used to understand complex or poorly understood phenomena for which little data may be available at the actual repository site. Earthquakes are complex phenomena, and they can have a large number of effects on the natural system, as well as on engineered structures. Instrumental data close to the source of large earthquakes are rarely obtained. The rare events for which measurements are available may be used, with modfications, as analogs for potential large earthquakes at sites where no earthquake data are available. In the following, several examples of nuclear reactor and liquified natural gas facility siting are discussed.more » A potential use of analog earthquakes is proposed for a high-level nuclear waste (HLW) repository.« less

  4. Putting Thought in Accordance with Things: The Demise of Animal-Based Analogies for Plant Functions

    NASA Astrophysics Data System (ADS)

    Barker, Miles

    Scientists' attempts to understand plant functions by ascribing animal functions to plants - the analogist tradition, derived from Aristotle - began to be superseded in Europe by an experimentalist tradition in the seventeenth century. In classrooms today, science students learning about plant functions (exemplified here by the topic of transpiration) face a parallel dilemma: the pitching of their own habitual mental processes of analogy building (enhanced by the suggestive morphology of plants)and the persuasiveness of everyday language (for example, about plants and water)against the new experimental evidence presented by the teacher. In the case oftranspiration, six practical suggestions whereby teachers can support students in thisstruggle to put their thoughts (especially everyday mental models) in accordance withthings (classroom experimental evidence) are advanced. The wider implications forhow we teach about Living Things, and how we view the status of analogies in sciencegenerally, are discussed.

  5. Towards a category theory approach to analogy: Analyzing re-representation and acquisition of numerical knowledge.

    PubMed

    Navarrete, Jairo A; Dartnell, Pablo

    2017-08-01

    Category Theory, a branch of mathematics, has shown promise as a modeling framework for higher-level cognition. We introduce an algebraic model for analogy that uses the language of category theory to explore analogy-related cognitive phenomena. To illustrate the potential of this approach, we use this model to explore three objects of study in cognitive literature. First, (a) we use commutative diagrams to analyze an effect of playing particular educational board games on the learning of numbers. Second, (b) we employ a notion called coequalizer as a formal model of re-representation that explains a property of computational models of analogy called "flexibility" whereby non-similar representational elements are considered matches and placed in structural correspondence. Finally, (c) we build a formal learning model which shows that re-representation, language processing and analogy making can explain the acquisition of knowledge of rational numbers. These objects of study provide a picture of acquisition of numerical knowledge that is compatible with empirical evidence and offers insights on possible connections between notions such as relational knowledge, analogy, learning, conceptual knowledge, re-representation and procedural knowledge. This suggests that the approach presented here facilitates mathematical modeling of cognition and provides novel ways to think about analogy-related cognitive phenomena.

  6. Towards a category theory approach to analogy: Analyzing re-representation and acquisition of numerical knowledge

    PubMed Central

    2017-01-01

    Category Theory, a branch of mathematics, has shown promise as a modeling framework for higher-level cognition. We introduce an algebraic model for analogy that uses the language of category theory to explore analogy-related cognitive phenomena. To illustrate the potential of this approach, we use this model to explore three objects of study in cognitive literature. First, (a) we use commutative diagrams to analyze an effect of playing particular educational board games on the learning of numbers. Second, (b) we employ a notion called coequalizer as a formal model of re-representation that explains a property of computational models of analogy called “flexibility” whereby non-similar representational elements are considered matches and placed in structural correspondence. Finally, (c) we build a formal learning model which shows that re-representation, language processing and analogy making can explain the acquisition of knowledge of rational numbers. These objects of study provide a picture of acquisition of numerical knowledge that is compatible with empirical evidence and offers insights on possible connections between notions such as relational knowledge, analogy, learning, conceptual knowledge, re-representation and procedural knowledge. This suggests that the approach presented here facilitates mathematical modeling of cognition and provides novel ways to think about analogy-related cognitive phenomena. PMID:28841643

  7. Analogical Scaffolding and the Learning of Abstract Ideas in Physics: Empirical Studies

    ERIC Educational Resources Information Center

    Podolefsky, Noah S.; Finkelstein, Noah D.

    2007-01-01

    Previously, we proposed a model of student reasoning which combines the roles of representation, analogy, and layering of meaning--analogical scaffolding [Podolefsky and Finkelstein, Phys. Rev. ST Phys. Educ. Res. 3, 010109 (2007)]. The present empirical studies build on this model to examine its utility and demonstrate the vital intertwining of…

  8. Established Stem Cell Model of Spinal Muscular Atrophy Is Applicable in the Evaluation of the Efficacy of Thyrotropin-Releasing Hormone Analog

    PubMed Central

    Ohuchi, Kazuki; Kato, Zenichiro; Seki, Junko; Kawase, Chizuru; Tamai, Yuya; Ono, Yoko; Nagahara, Yuki; Noda, Yasuhiro; Kameyama, Tsubasa; Ando, Shiori; Tsuruma, Kazuhiro; Shimazawa, Masamitsu; Hara, Hideaki; Kaneko, Hideo

    2016-01-01

    Spinal muscular atrophy (SMA) is an autosomal recessive neuromuscular disorder characterized by the degeneration of spinal motor neurons. This disease is mainly caused by mutation or deletion of the survival motor neuron 1 (SMN1) gene. Currently, no effective treatment is available, and only symptomatic treatment can be provided. Our purpose in the present study was to establish a human SMA-derived induced pluripotent stem cell (SMA-iPSC) disease model and assay a therapeutic drug in preparation for the development of a novel treatment of SMA. We generated iPSCs from the skin fibroblasts of a patient with SMA and confirmed that they were pluripotent and undifferentiated. The neural differentiation of SMA-iPSCs shortened the dendrite and axon length and increased the apoptosis of the spinal motor neurons. In addition, we found activated astrocytes in differentiated SMA-iPSCs. Using this model, we confirmed that treatment with the thyrotropin-releasing hormone (TRH) analog, 5-oxo-l-prolyl-l-histidyl-l-prolinamide, which had marginal effects in clinical trials, increases the SMN protein level. This increase was mediated through the transcriptional activation of the SMN2 gene and inhibition of glycogen synthase kinase-3β activity. Finally, the TRH analog treatment resulted in dendrite and axon development of spinal motor neurons in differentiated SMA-iPSCs. These results suggest that this human in vitro disease model stimulates SMA pathology and reveal the potential efficacy of TRH analog treatment for SMA. Therefore, we can screen novel therapeutic drugs such as TRH for SMA easily and effectively using the human SMA-iPSC model. Significance Platelet-derived growth factor (PDGF) has recently been reported to produce the greatest increase in survival motor neuron protein levels by inhibiting glycogen synthase kinase (GSK)-3β; however, motor neurons lack PDGF receptors. A human in vitro spinal muscular atrophy-derived induced pluripotent stem cell model was established

  9. Established Stem Cell Model of Spinal Muscular Atrophy Is Applicable in the Evaluation of the Efficacy of Thyrotropin-Releasing Hormone Analog.

    PubMed

    Ohuchi, Kazuki; Funato, Michinori; Kato, Zenichiro; Seki, Junko; Kawase, Chizuru; Tamai, Yuya; Ono, Yoko; Nagahara, Yuki; Noda, Yasuhiro; Kameyama, Tsubasa; Ando, Shiori; Tsuruma, Kazuhiro; Shimazawa, Masamitsu; Hara, Hideaki; Kaneko, Hideo

    2016-02-01

    Spinal muscular atrophy (SMA) is an autosomal recessive neuromuscular disorder characterized by the degeneration of spinal motor neurons. This disease is mainly caused by mutation or deletion of the survival motor neuron 1 (SMN1) gene. Currently, no effective treatment is available, and only symptomatic treatment can be provided. Our purpose in the present study was to establish a human SMA-derived induced pluripotent stem cell (SMA-iPSC) disease model and assay a therapeutic drug in preparation for the development of a novel treatment of SMA. We generated iPSCs from the skin fibroblasts of a patient with SMA and confirmed that they were pluripotent and undifferentiated. The neural differentiation of SMA-iPSCs shortened the dendrite and axon length and increased the apoptosis of the spinal motor neurons. In addition, we found activated astrocytes in differentiated SMA-iPSCs. Using this model, we confirmed that treatment with the thyrotropin-releasing hormone (TRH) analog, 5-oxo-l-prolyl-l-histidyl-l-prolinamide, which had marginal effects in clinical trials, increases the SMN protein level. This increase was mediated through the transcriptional activation of the SMN2 gene and inhibition of glycogen synthase kinase-3β activity. Finally, the TRH analog treatment resulted in dendrite and axon development of spinal motor neurons in differentiated SMA-iPSCs. These results suggest that this human in vitro disease model stimulates SMA pathology and reveal the potential efficacy of TRH analog treatment for SMA. Therefore, we can screen novel therapeutic drugs such as TRH for SMA easily and effectively using the human SMA-iPSC model. Significance: Platelet-derived growth factor (PDGF) has recently been reported to produce the greatest increase in survival motor neuron protein levels by inhibiting glycogen synthase kinase (GSK)-3β; however, motor neurons lack PDGF receptors. A human in vitro spinal muscular atrophy-derived induced pluripotent stem cell model was

  10. A Coral Reef as an Analogical Model to Promote Collaborative Learning on Cultural & Ethnic Diversity in Science

    ERIC Educational Resources Information Center

    Yost, Robert W.; Gonzalez, Edward L. F.

    2008-01-01

    Analogical reasoning is integral to everyday living. The diversity associated with a coral reef provides a familiar model for initiating discussions focusing on cultural diversity and gender of past and present scientists with non-western science endeavors. These concepts are strengthened through the use of scientific biographical and historical…

  11. Spaceflight Sensorimotor Analogs: Simulating Acute and Adaptive Effects

    NASA Technical Reports Server (NTRS)

    Taylor, Laura C.; Harm, Deborah L.; Kozlovskaya, Inessa; Reschke, Millard F.; Wood, Scott J.

    2009-01-01

    Adaptive changes in sensorimotor function during spaceflight are reflected by spatial disorientation, motion sickness, gaze destabilization and decrements in balance, locomotion and eye-hand coordination that occur during and following transitions between different gravitational states. The purpose of this study was to conduct a meta-synthesis of data from spaceflight analogs to evaluate their effectiveness in simulating adaptive changes in sensorimotor function. METHODS. The analogs under review were categorized as either acute analogs used to simulate performance decrements accompanied with transient changes, or adaptive analogs used to drive sensorimotor learning to altered sensory feedback. The effectiveness of each analog was evaluated in terms of mechanisms of action, magnitude and time course of observed deficits compared to spaceflight data, and the effects of amplitude and exposure duration. RESULTS. Parabolic flight has been used extensively to examine effects of acute variation in gravitational loads, ranging from hypergravity to microgravity. More recently, galvanic vestibular stimulation has been used to elicit acute postural, locomotor and gaze dysfunction by disrupting vestibular afferents. Patient populations, e.g., with bilateral vestibular loss or cerebellar dysfunction, have been proposed to model acute sensorimotor dysfunction. Early research sponsored by NASA involved living onboard rotating rooms, which appeared to approximate the time course of adaptation and post-exposure recovery observed in astronauts following spaceflight. Exposure to different bed-rest paradigms (6 deg head down, dry immersion) result in similar motor deficits to that observed following spaceflight. Shorter adaptive analogs have incorporated virtual reality environments, visual distortion paradigms, exposure to conflicting tilt-translation cues, and exposure to 3Gx centrifugation. As with spaceflight, there is considerable variability in responses to most of the analogs

  12. Terrestrial Analogs to Mars: NRC Community Panel Decadal Report

    NASA Astrophysics Data System (ADS)

    Farr, T. G.

    2002-12-01

    A report was completed recently by a Community Panel for the NRC Decadal Study of Solar System Exploration. The desire was for a review of the current state of knowledge and for recommendations for action over the next decade. The topic of this panel, Terrestrial Analogs to Mars, was chosen to bring attention to the need for an increase in analog studies in support of the increased pace of Mars exploration. It is well recognized that interpretations of Mars must begin with the Earth as a reference. The most successful comparisons have focused on understanding geologic processes on the Earth well enough to extrapolate to Mars' environment. Several facets of terrestrial analog studies have been pursued and are continuing. These studies include field workshops, characterization of terrestrial analog sites, instrument tests, laboratory measurements (including analysis of martian meteorites), and computer and laboratory modeling. The combination of all of these activities allows scientists to constrain the processes operating in specific terrestrial environments and extrapolate how similar processes could affect Mars. The Terrestrial Analogs for Mars Community Panel has considered the following two key questions: (1) How do terrestrial analog studies tie in to the overarching science questions about life, past climate, and geologic evolution of Mars, and (2) How can future instrumentation be used to address these questions. The panel considered the issues of data collection and archiving, value of field workshops, laboratory measurements and modeling, human exploration issues, association with other areas of solar system exploration, and education and public outreach activities. Parts of this work were performed under contract to NASA.

  13. Automatic Generation of Analogy Questions for Student Assessment: An Ontology-Based Approach

    ERIC Educational Resources Information Center

    Alsubait, Tahani; Parsia, Bijan; Sattler, Uli

    2012-01-01

    Different computational models for generating analogies of the form "A is to B as C is to D" have been proposed over the past 35 years. However, analogy generation is a challenging problem that requires further research. In this article, we present a new approach for generating analogies in Multiple Choice Question (MCQ) format that can be used…

  14. Organization of fluorescent cholesterol analogs in lipid bilayers - lessons from cyclodextrin extraction.

    PubMed

    Milles, Sigrid; Meyer, Thomas; Scheidt, Holger A; Schwarzer, Roland; Thomas, Lars; Marek, Magdalena; Szente, Lajos; Bittman, Robert; Herrmann, Andreas; Günther Pomorski, Thomas; Huster, Daniel; Müller, Peter

    2013-08-01

    To characterize the structure and dynamics of cholesterol in membranes, fluorescent analogs of the native molecule have widely been employed. The cholesterol content in membranes is in general manipulated by using water-soluble cyclodextrins. Since the interactions between cyclodextrins and fluorescent-labeled cholesterol have not been investigated in detail so far, we have compared the cyclodextrin-mediated membrane extraction of three different fluorescent cholesterol analogs (one bearing a NBD and two bearing BODIPY moieties). Extraction of these analogs was followed by measuring the Förster resonance energy transfer between a rhodamine moiety linked to phosphatidylethanolamine and the labeled cholesterol. The extraction kinetics revealed that the analogs are differently extracted from membranes. We examined the orientation of the analogs within the membrane and their influence on lipid condensation using NMR and EPR spectroscopies. Our data indicate that the extraction of fluorescent sterols from membranes is determined by several parameters, including their impact on lipid order, their hydrophobicity, their intermolecular interactions with surrounding lipids, their orientation within the bilayer, and their affinity with the exogenous acceptor. Copyright © 2013 Elsevier B.V. All rights reserved.

  15. Analogical Reasoning in Geometry Education

    ERIC Educational Resources Information Center

    Magdas, Ioana

    2015-01-01

    The analogical reasoning isn't used only in mathematics but also in everyday life. In this article we approach the analogical reasoning in Geometry Education. The novelty of this article is a classification of geometrical analogies by reasoning type and their exemplification. Our classification includes: analogies for understanding and setting a…

  16. Analog modelling of obduction processes

    NASA Astrophysics Data System (ADS)

    Agard, P.; Zuo, X.; Funiciello, F.; Bellahsen, N.; Faccenna, C.; Savva, D.

    2012-04-01

    Obduction corresponds to one of plate tectonics oddities, whereby dense, oceanic rocks (ophiolites) are presumably 'thrust' on top of light, continental ones, as for the short-lived, almost synchronous Peri-Arabic obduction (which took place along thousands of km from Turkey to Oman in c. 5-10 Ma). Analog modelling experiments were performed to study the mechanisms of obduction initiation and test various triggering hypotheses (i.e., plate acceleration, slab hitting the 660 km discontinuity, ridge subduction; Agard et al., 2007). The experimental setup comprises (1) an upper mantle, modelled as a low-viscosity transparent Newtonian glucose syrup filling a rigid Plexiglas tank and (2) high-viscosity silicone plates (Rhodrosil Gomme with PDMS iron fillers to reproduce densities of continental or oceanic plates), located at the centre of the tank above the syrup to simulate the subducting and the overriding plates - and avoid friction on the sides of the tank. Convergence is simulated by pushing on a piston at one end of the model with velocities comparable to those of plate tectonics (i.e., in the range 1-10 cm/yr). The reference set-up includes, from one end to the other (~60 cm): (i) the piston, (ii) a continental margin containing a transition zone to the adjacent oceanic plate, (iii) a weakness zone with variable resistance and dip (W), (iv) an oceanic plate - with or without a spreading ridge, (v) a subduction zone (S) dipping away from the piston and (vi) an upper, active continental margin, below which the oceanic plate is being subducted at the start of the experiment (as is known to have been the case in Oman). Several configurations were tested and over thirty different parametric tests were performed. Special emphasis was placed on comparing different types of weakness zone (W) and the extent of mechanical coupling across them, particularly when plates were accelerated. Displacements, together with along-strike and across-strike internal deformation in all

  17. Combinatorially-generated library of 6-fluoroquinolone analogs as potential novel antitubercular agents: a chemometric and molecular modeling assessment.

    PubMed

    Minovski, Nikola; Perdih, Andrej; Solmajer, Tom

    2012-05-01

    The virtual combinatorial chemistry approach as a methodology for generating chemical libraries of structurally-similar analogs in a virtual environment was employed for building a general mixed virtual combinatorial library with a total of 53.871 6-FQ structural analogs, introducing the real synthetic pathways of three well known 6-FQ inhibitors. The druggability properties of the generated combinatorial 6-FQs were assessed using an in-house developed drug-likeness filter integrating the Lipinski/Veber rule-sets. The compounds recognized as drug-like were used as an external set for prediction of the biological activity values using a neural-networks (NN) model based on an experimentally-determined set of active 6-FQs. Furthermore, a subset of compounds was extracted from the pool of drug-like 6-FQs, with predicted biological activity, and subsequently used in virtual screening (VS) campaign combining pharmacophore modeling and molecular docking studies. This complex scheme, a powerful combination of chemometric and molecular modeling approaches provided novel QSAR guidelines that could aid in the further lead development of 6-FQs agents.

  18. Ground-water models for water resources planning

    USGS Publications Warehouse

    Moore, John E.

    1980-01-01

    In the past decade hydrologists have emphasized the development of computer-based mathematical models to aid in the understanding of flow, the transport of solutes, transport of heat, and deformation in the groundwater system. These models have been used to provide information and predictions for water managers. Too frequently, groundwater was neglected in water-resource planning because managers believed that it could not be adequately evaluated in terms of availability, quality, and effect of development on surface water supplies. Now, however, with newly developed digital groundwater models, effects of development can be predicted. Such models have been used to predict hydrologic and quality changes under different stresses. These models have grown in complexity over the last 10 years from simple one-layer flow models to three-dimensional simulations of groundwater flow which may include solute transport, heat transport, effects of land subsidence, and encroachment of salt water. This paper illustrates, through case histories, how predictive groundwater models have provided the information needed for the sound planning and management of water resources in the United States. (USGS)

  19. [The function of analogies in natural sciences, also in contrast to metaphors and models].

    PubMed

    Hentschel, Klaus

    2010-01-01

    This introduction surveys the various functions of analogies in science, medicine and technology. The focus is on their heuristic importance. The productiveness of analogies is linked to the systematic depth and breadth of the established connections. Various examples are presented from different periods in the history of science, most notably Galileo; such late-Victorian Maxwellians as George Francis FitzGerald and Oliver Lodge; and Heinrich HERTZ and Niels BOHR. These examples are examined in terms of the specific differing temporal ranges of their claimed validities. They serve as evidence or counterevidence for various systematic analyses of analogies as put forward by various philosophers of science, most notably Francis Bacon, John Stuart Mill, Ernst Mach, Harald Høffding, Ernest Nagel, Mary Hesse and Peter Achinstein. The analytic framework for analogies supported here is what the cognitive scientist Dedre Gentner has termed structure-mapping.

  20. Transistor analogs of emergent iono-neuronal dynamics.

    PubMed

    Rachmuth, Guy; Poon, Chi-Sang

    2008-06-01

    Neuromorphic analog metal-oxide-silicon (MOS) transistor circuits promise compact, low-power, and high-speed emulations of iono-neuronal dynamics orders-of-magnitude faster than digital simulation. However, their inherently limited input voltage dynamic range vs power consumption and silicon die area tradeoffs makes them highly sensitive to transistor mismatch due to fabrication inaccuracy, device noise, and other nonidealities. This limitation precludes robust analog very-large-scale-integration (aVLSI) circuits implementation of emergent iono-neuronal dynamics computations beyond simple spiking with limited ion channel dynamics. Here we present versatile neuromorphic analog building-block circuits that afford near-maximum voltage dynamic range operating within the low-power MOS transistor weak-inversion regime which is ideal for aVLSI implementation or implantable biomimetic device applications. The fabricated microchip allowed robust realization of dynamic iono-neuronal computations such as coincidence detection of presynaptic spikes or pre- and postsynaptic activities. As a critical performance benchmark, the high-speed and highly interactive iono-neuronal simulation capability on-chip enabled our prompt discovery of a minimal model of chaotic pacemaker bursting, an emergent iono-neuronal behavior of fundamental biological significance which has hitherto defied experimental testing or computational exploration via conventional digital or analog simulations. These compact and power-efficient transistor analogs of emergent iono-neuronal dynamics open new avenues for next-generation neuromorphic, neuroprosthetic, and brain-machine interface applications.

  1. Meat analog: a review.

    PubMed

    Malav, O P; Talukder, S; Gokulakrishnan, P; Chand, S

    2015-01-01

    The health-conscious consumers are in search of nutritious and convenient food item which can be best suited in their busy life. The vegetarianism is the key for the search of such food which resembles the meat in respect of nutrition and sensory characters, but not of animal origin and contains vegetable or its modified form, this is the point when meat analog evolved out and gets shape. The consumers gets full satisfaction by consumption of meat analog due to its typical meaty texture, appearance and the flavor which are being imparted during the skilled production of meat analog. The supplement of protein in vegetarian diet through meat alike food can be fulfilled by incorporating protein-rich vegetative food grade materials in meat analog and by adopting proper technological process which can promote the proper fabrication of meat analog with acceptable meat like texture, appearance, flavor, etc. The easily available vegetables, cereals, and pulses in India have great advantages and prospects to be used in food products and it can improve the nutritional and functional characters of the food items. The various form and functional characters of food items are available world over and attracts the meat technologists and the food processors to bring some innovativeness in meat analog and its presentation and marketability so that the acceptability of meat analog can be overgrown by the consumers.

  2. Digital and analog communication systems

    NASA Technical Reports Server (NTRS)

    Shanmugam, K. S.

    1979-01-01

    The book presents an introductory treatment of digital and analog communication systems with emphasis on digital systems. Attention is given to the following topics: systems and signal analysis, random signal theory, information and channel capacity, baseband data transmission, analog signal transmission, noise in analog communication systems, digital carrier modulation schemes, error control coding, and the digital transmission of analog signals.

  3. Novel Vitamin K analogs suppress seizures in zebrafish and mouse models of epilepsy.

    PubMed

    Rahn, J J; Bestman, J E; Josey, B J; Inks, E S; Stackley, K D; Rogers, C E; Chou, C J; Chan, S S L

    2014-02-14

    Epilepsy is a debilitating disease affecting 1-2% of the world's population. Despite this high prevalence, 30% of patients suffering from epilepsy are not successfully managed by current medication suggesting a critical need for new anti-epileptic drugs (AEDs). In an effort to discover new therapeutics for the management of epilepsy, we began our study by screening drugs that, like some currently used AEDs, inhibit histone deacetylases (HDACs) using a well-established larval zebrafish model. In this model, 7-day post fertilization (dpf) larvae are treated with the widely used seizure-inducing compound pentylenetetrazol (PTZ) which stimulates a rapid increase in swimming behavior previously determined to be a measurable manifestation of seizures. In our first screen, we tested a number of different HDAC inhibitors and found that one, 2-benzamido-1 4-naphthoquinone (NQN1), significantly decreased swim activity to levels equal to that of valproic acid, 2-n-propylpentanoic acid (VPA). We continued to screen structurally related compounds including Vitamin K3 (VK3) and a number of novel Vitamin K (VK) analogs. We found that VK3 was a robust inhibitor of the PTZ-induced swim activity, as were several of our novel compounds. Three of these compounds were subsequently tested on mouse seizure models at the National Institute of Neurological Disorders and Stroke (NINDS) Anticonvulsant Screening Program. Compound 2h reduced seizures particularly well in the minimal clonic seizure (6Hz) and corneal-kindled mouse models of epilepsy, with no observable toxicity. As VK3 affects mitochondrial function, we tested the effects of our compounds on mitochondrial respiration and ATP production in a mouse hippocampal cell line. We demonstrate that these compounds affect ATP metabolism and increase total cellular ATP. Our data indicate the potential utility of these and other VK analogs for the prevention of seizures and suggest the potential mechanism for this protection may lie in the

  4. The Community Water Model (CWATM) / Development of a community driven global water model

    NASA Astrophysics Data System (ADS)

    Burek, Peter; Satoh, Yusuke; Greve, Peter; Kahil, Taher; Wada, Yoshihide

    2017-04-01

    With a growing population and economic development, it is expected that water demands will increase significantly in the future, especially in developing regions. At the same time, climate change is expected to alter spatial patterns of hydrological cycle and will have global, regional and local impacts on water availability. Thus, it is important to assess water supply, water demand and environmental needs over time to identify the populations and locations that will be most affected by these changes linked to water scarcity, droughts and floods. The Community Water Model (CWATM) will be designed for this purpose in that it includes an accounting of how future water demands will evolve in response to socioeconomic change and how water availability will change in response to climate. CWATM represents one of the new key elements of IIASA's Water program. It has been developed to work flexibly at both global and regional level at different spatial resolutions. The model is open source and community-driven to promote our work amongst the wider water community worldwide and is flexible enough linking to further planned developments such as water quality and hydro-economic modules. CWATM will be a basis to develop a next-generation global hydro-economic modeling framework that represents the economic trade-offs among different water management options over a basin looking at water supply infrastructure and demand managements. The integrated modeling framework will consider water demand from agriculture, domestic, energy, industry and environment, investment needs to alleviate future water scarcity, and will provide a portfolio of economically optimal solutions for achieving future water management options under the Sustainable Development Goals (SDG) for example. In addition, it will be able to track the energy requirements associated with the water supply system e.g., pumping, desalination and interbasin transfer to realize the linkage with the water-energy economy. In

  5. Progress on the Use of Combined Analog and Photon Counting Detection for Raman Lidar

    NASA Technical Reports Server (NTRS)

    Newsom, Rob; Turner, Dave; Clayton, Marian; Ferrare, Richard

    2008-01-01

    The Atmospheric Radiation Measurement (ARM) program Raman Lidar (CARL) was upgraded in 2004 with a new data system that provides simultaneous measurements of both the photomultiplier analog output voltage and photon counts. The so-called merge value added procedure (VAP) was developed to combine the analog and count-rate signals into a single signal with improved dynamic range. Earlier versions of this VAP tended to cause unacceptably large biases in the water vapor mixing ratio during the daytime as a result of improper matching between the analog and count-rate signals in the presence of elevated solar background levels. We recently identified several problems and tested a modified version of the merge VAP by comparing profiles of water vapor mixing ratio derived from CARL with simultaneous sonde data over a six month period. We show that the modified merge VAP significantly reduces the daytime bias, and results in mean differences that are within approximately 1% for both nighttime and daytime measurements.

  6. On the Suitability of Lanthanides as Actinide Analogs

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Szigethy, Geza; Raymond, Kenneth N.

    2008-04-11

    With the current level of actinide materials used in civilian power generation and the need for safe and efficient methods for the chemical separation of these species from their daughter products and for long-term storage requirements, a detailed understanding of actinide chemistry is of great importance. Due to the unique bonding properties of the f-elements, the lanthanides are commonly used as structural and chemical models for the actinides, but differences in the bonding between these 4f and 5f elements has become a question of immediate applicability to separations technology. This brief overview of actinide coordination chemistry in the Raymond groupmore » at UC Berkeley/LBNL examines the validity of using lanthanide analogs as structural models for the actinides, with particular attention paid to single crystal X-ray diffraction structures. Although lanthanides are commonly accepted as reasonable analogs for the actinides, these comparisons suggest the careful study of actinide materials independent of their lanthanide analogs to be of utmost importance to present and future efforts in nuclear industries.« less

  7. On the suitability of lanthanides as actinide analogs

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Raymond, Kenneth; Szigethy, Geza

    2008-07-01

    With the current level of actinide materials used in civilian power generation and the need for safe and efficient methods for the chemical separation of these species from their daughter products and for long-term storage requirements, a detailed understanding of actinide chemistry is of great importance. Due to the unique bonding properties of the f-elements, the lanthanides are commonly used as structural and chemical models for the actinides, but differences in the bonding between these 4f and 5f elements has become a question of immediate applicability to separations technology. This brief overview of actinide coordination chemistry in the Raymond groupmore » at UC Berkeley/LBNL examines the validity of using lanthanide analogs as structural models for the actinides, with particular attention paid to single crystal X-ray diffraction structures. Although lanthanides are commonly accepted as reasonable analogs for the actinides, these comparisons suggest the careful study of actinide materials independent of their lanthanide analogs to be of utmost importance to present and future efforts in nuclear industries. (authors)« less

  8. Obduction: Why, how and where. Clues from analog models

    NASA Astrophysics Data System (ADS)

    Agard, P.; Zuo, X.; Funiciello, F.; Bellahsen, N.; Faccenna, C.; Savva, D.

    2014-05-01

    Obduction is an odd geodynamic process characterized by the emplacement of dense oceanic “ophiolites” atop light continental plates in convergent settings. We herein present analog models specifically designed to explore the conditions (i.e., sharp increase of plate velocities - herein coined as ‘acceleration’, slab interaction with the 660 km discontinuity, ridge subduction) under which obduction may develop as a result of subduction initiation. The experimental setup comprises an upper mantle modeled as a low-viscosity transparent Newtonian glucose syrup filling a rigid Plexiglas tank and high-viscosity silicone plates. Convergence is simulated by pushing a piston with plate tectonics like velocities (1-10 cm/yr) onto a model comprising a continental margin, a weakness zone with variable resistance and dip (W), an oceanic plate (with or without a spreading ridge), a preexisting subduction zone (S) dipping away from the piston and an upper active continental margin, below which the oceanic plate is being subducted at the start of the model (as for the Neotethyan natural example). Several configurations were tested over thirty-five parametric models, with special emphasis on comparing different types of weakness zone and the degree of mechanical coupling across them. Measurements of displacements and internal deformation allow for a precise and reproducible tracking of deformation. Models consistently demonstrate that once conditions to initiate subduction are reached, obduction may develop further depending on the effective strength of W. Results (1) constrain the range of physical conditions required for obduction to develop/nucleate and (2) underline the key role of such perturbations for triggering obduction, particularly plate ‘acceleration’. They provide an explanation to the short-lived Peri-Arabic obduction, which took place along thousands of km almost synchronously (within ∼50-10 Myr), from Turkey to Oman, while the subduction zone beneath

  9. Effects of Bisphenol A and its Analogs on Reproductive Health: A Mini Review.

    PubMed

    Siracusa, Jacob Steven; Yin, Lei; Measel, Emily; Liang, Shenuxan; Yu, Xiaozhong

    2018-06-17

    Known endocrine disruptor bisphenol A (BPA) has been shown to be a reproductive toxicant in animal models. Its structural analogs: bisphenol S (BPS), bisphenol F (BPF), bisphenol AF (BPAF), and tetrabromobisphenol A (TBBPA) are increasingly being used in consumer products. However, these analogs may exert similar adverse effects on the reproductive system, and their toxicological data are still limited. This mini-review examined studies on both BPA and BPA analog exposure and reproductive toxicity. It outlines the current state of knowledge on human exposure, toxicokinetics, endocrine activities, and reproductive toxicities of BPA and its analogs. BPA analogs showed similar endocrine potencies when compared to BPA, and emerging data suggest they may pose threats as reproductive hazards in animal models. While evidence based on epidemiological studies is still weak, we have utilized current studies to highlight knowledge gaps and research needs for future risk assessments. Copyright © 2018. Published by Elsevier Inc.

  10. Hydraulic Capacitor Analogy

    ERIC Educational Resources Information Center

    Baser, Mustafa

    2007-01-01

    Students have difficulties in physics because of the abstract nature of concepts and principles. One of the effective methods for overcoming students' difficulties is the use of analogies to visualize abstract concepts to promote conceptual understanding. According to Iding, analogies are consistent with the tenets of constructivist learning…

  11. The Analog (Computer) As a Physiology Adjunct.

    ERIC Educational Resources Information Center

    Stewart, Peter A.

    1979-01-01

    Defines and discusses the analog computer and its use in a physiology laboratory. Includes two examples: (1) The Respiratory Control Function and (2) CO-Two Control in the Respiratory System. Presents diagrams and mathematical models. (MA)

  12. In vivo screening and discovery of novel candidate thalidomide analogs in the zebrafish embryo and chicken embryo model systems

    PubMed Central

    Beedie, Shaunna L.; Rore, Holly M.; Barnett, Shelby; Chau, Cindy H.; Luo, Weiming; Greig, Nigel H.; Figg, William D.; Vargesson, Neil

    2016-01-01

    Thalidomide, a drug known for its teratogenic side-effects, is used successfully to treat a variety of clinical conditions including leprosy and multiple myeloma. Intense efforts are underway to synthesize and identify safer, clinically relevant analogs. Here, we conduct a preliminary in vivo screen of a library of new thalidomide analogs to determine which agents demonstrate activity, and describe a cohort of compounds with anti-angiogenic properties, anti-inflammatory properties and some compounds which exhibited both. The combination of the in vivo zebrafish and chicken embryo model systems allows for the accelerated discovery of new, potential therapies for cancerous and inflammatory conditions. PMID:27120781

  13. Mound Spring Complexes in Central Australia: An Analog for Martian Groundwater Fed Outflow Channels?

    NASA Technical Reports Server (NTRS)

    Clarke, J. D. A.; Stoker, C.

    2003-01-01

    The arid inland of Australia contains a diversity of landscapes and landscape processes, often of great antiquity, extending back to the Mesozoic and Paleozoic. The potential of this landscape as a source of Mars analogs has, however, been little explored. The few examples studied so far include radiation-tolerant microbes in thermal springs and hematite-silica hydrothermal alteration near Arkaroola in the Finders Ranges, and aeolian landforms at Gurra Gurra water hole the north east of Arkaroola. Further Australian Mars analog studies were provided by the studies of Bourke and Zimbelman of the paleoflood record of the Todd and Hale Rivers in central Australia. To facilitate study of such analogues, Mars Society Australia has embarked on a project to construct a Mars Analog Research Station near Arkaroola. The international scientific community will soon have the opportunity to participate in Mars analog studies in central Australia utilizing this facility. An area of considerable Mars analog potential is the mound spring complexes that occur at the margins of the Great Artesian Basin (GAB) which underlies 22% of the Australian continent and covers 1.7 million km2. The mound springs are formed when ground water flows to a topographic low, and subsurface strata dips up causing a hydrological head at the surface. Minerals precipitated at the spring discharge zone form low mesas or "mounds", the height of which are controlled by the hydrological head. This paper describes the Dalhousie Mound Spring Complex (DMC) in the northern part of South Australia (Figure 1), and its potential as a Mars analog. Hydrogeology: The DMC consists of a cluster of more than 60 active springs formed by natural discharge from the GAB). Total measured discharge from the GAB is 1.74 GL per day, estimated unfocussed natural leakage through the aquaclude is thought be approximately equal to this figure. Some 54 ML per day are currently discharged by the DMC, 3% of the measured total. The

  14. E. coli survival in waters: temperature dependence

    USDA-ARS?s Scientific Manuscript database

    Knowing the survival rates of water-borne Escherichia coli is important for evaluating microbial contamination and in making appropriate management decisions. E. coli survival rates are dependent on temperature; this dependency is routinely expressed using an analog of the Q10 model. This suggestion...

  15. Antarctic Analog for Dilational Bands on Europa

    NASA Technical Reports Server (NTRS)

    Hurford, T. A.; Brunt, K. M.

    2014-01-01

    Europa's surface shows signs of extension, which is revealed as lithospheric dilation expressed along ridges, dilational bands and ridged bands. Ridges, the most common tectonic feature on Europa, comprise a central crack flanked by two raised banks a few hundred meters high on each side. Together these three classes may represent a continuum of formation. In Tufts' Dilational Model ridge formation is dominated by daily tidal cycling of a crack, which can be superimposed with regional secular dilation. The two sources of dilation can combine to form the various band morphologies observed. New GPS data along a rift on the Ross Ice Shelf, Antarctica is a suitable Earth analog to test the framework of Tufts' Dilational Model. As predicted by Tufts' Dilational Model, tensile failures in the Ross Ice Shelf exhibit secular dilation, upon which a tidal signal can be seen. From this analog we conclude that Tufts' Dilational Model for Europan ridges and bands may be credible and that the secular dilation is most likely from a regional source and not tidally driven.

  16. Analog pulse processor

    DOEpatents

    Wessendorf, Kurt O.; Kemper, Dale A.

    2003-06-03

    A very low power analog pulse processing system implemented as an ASIC useful for processing signals from radiation detectors, among other things. The system incorporates the functions of a charge sensitive amplifier, a shaping amplifier, a peak sample and hold circuit, and, optionally, an analog to digital converter and associated drivers.

  17. The predictability of Iowa's hydroclimate through analog forecasts

    NASA Astrophysics Data System (ADS)

    Rowe, Scott Thomas

    Iowa has long been affected by periods characterized by extreme drought and flood. In 2008, Cedar Rapids, Iowa was devastated by a record flood with damages around 3 billion. Several years later, Iowa was affected by severe drought in 2012, causing upwards of 30 billion in damages and losses across the United States. These climatic regimes can quickly transition from one regime to another, as was observed in the June 2013 major floods to the late summer 2013 severe drought across eastern Iowa. Though it is not possible to prevent a natural disaster from occurring, we explore how predictable these events are by using forecast models and analogs. Iowa's climate records are analyzed from 1950 to 2012 to determine if there are specific surface and upper-air pressure patterns linked to climate regimes (i.e., cold/hot and dry/wet conditions for a given month). We found that opposing climate regimes in Iowa have reversed anomalies in certain geographical regions of the northern hemisphere. These defined patterns and waves suggested to us that it could be possible to forecast extreme temperature and precipitation periods over Iowa if given a skillful forecast system. We examined the CMC, COLA, and GFDL models within the National Multi-Model Ensemble suite to create analog forecasts based on either surface or upper-air pressure forecasts. The verification results show that some analogs have predictability skill at the 0.5-month lead time exceeding random chance, but our overall confidence in the analog forecasts is not high enough to allow us to issue statewide categorical temperature and precipitation climate forecasts.

  18. Are Scientific Analogies Metaphors?

    DTIC Science & Technology

    1981-02-01

    attraction is certainly familiar, but its rules are unfortunately unclear; so this analogy does not tell the student precisely what to map from the...seriously. The rules of analogical mappings are such that, unless there is a principled reason to exempt a given predicate, it must be mapped if it belongs...contributes to their richness, for no possible mapping need be ruled out. Mutually contradictory inferences can co-exist. These analogies derive much

  19. Determination of an organic-acid analog of DOC for use in copper toxicity studies on salmonids

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    MacRae, R.K.; Meyer, J.S.; Hansen, J.A.

    1995-12-31

    Concentrations of dissolved copper in streams draining mine sites often exceed concentrations shown to cause acute and chronic mortality in salmonids. However, toxicity and impaired behaviors may be modified by dissolved organic carbon (DOC) and other inorganic components present in the site water. The effects of DOC on copper speciation, and thus bioavailability and toxicity, were determined by titrating stream waters with copper, using a cupric ion-specific electrode to detect free copper concentrations. Effects of various competing cations (e.g., Ca{sup +2}, Co{sup +2}) on copper-DOC binding were also evaluated. Titration results were evaluated using Scatchard and non-linear regression analyses tomore » quantify the strength and capacity of copper-DOC binding. Inorganic speciation was determined using the geochemical model MINEQL{sup +}. Results of these titrations indicated the presence of two or three distinct copper binding components in site water DOC. Three commercially available organic acids where then chosen to mimic the binding characteristics of natural DOC. This DOC-analog was used successfully in fish toxicity studies to evaluate the influence of DOC on copper bioavailability. Geochemical models were developed to predict copper speciation in both laboratory test waters and site waters, for any typical combination of water chemistry parameters (pH, alkalinity, [DOC], etc.). A combined interpretation of fish toxicity and modeling results indicate that some DOC-bound copper was bioavailable.« less

  20. Retrospective Analog Year Analyses Using NASA Satellite Precipitation and Soil Moisture Data to Improve USDA's World Agricultural Supply and Demand Estimates

    NASA Astrophysics Data System (ADS)

    Teng, W. L.; Shannon, H.

    2010-12-01

    The USDA World Agricultural Outlook Board (WAOB) coordinates the development of the monthly World Agricultural Supply and Demand Estimates (WASDE) for the U.S. and major foreign producing countries. Given the significant effect of weather on crop progress, conditions, and production, WAOB prepares frequent agricultural weather assessments in the Global Agricultural Decision Support Environment (GLADSE). Because the timing of the precipitation is often as important as the amount, in their effects on crop production, WAOB frequently examines precipitation time series to estimate crop productivity. An effective method for such assessment is the use of analog year comparisons, where precipitation time series, based on surface weather stations, from several historical years are compared with the time series from the current year. Once analog years are identified, crop yields can be estimated for the current season based on observed yields from the analog years, because of the similarities in the precipitation patterns. In this study, NASA satellite precipitation and soil moisture time series are used to identify analog years. Given that soil moisture often has a more direct effect than does precipitation on crop water availability, the time series of soil moisture could be more effective than that of precipitation, in identifying those years with similar crop yields. Retrospective analyses of analogs will be conducted to determine any reduction in the level of uncertainty in identifying analog years, and any reduction in false negatives or false positives. The comparison of analog years could potentially be improved by quantifying the selection of analogs, instead of the current visual inspection method. Various approaches to quantifying are currently being evaluated. This study is part of a larger effort to improve WAOB estimates by integrating NASA remote sensing soil moisture observations and research results into GLADSE, including (1) the integration of the Land

  1. [Development of the soft independent modelling of class analogies model to discrimination Vibrio parahemolyticus by Smartongue].

    PubMed

    Huang, Jianfeng; Zhao, Guangying; Dou, Wenchao

    2011-04-01

    To explore a new rapid detection method for detecting of Food pathogens. We used the Smartongue, to determine the composition informations of the liquid culture samples and combined with soft independent modelling of class analogies (SIMCA) to analyze their respective species, then set up a Smartongue -SIMCA model to discriminate the V. parahaemolyticus. The Smartongue has 6 working electrodes and three frequency segments, we can built 18 discrimination models in one detection. After comparing all the 18 discrimination models, the optimal working electrodes and frequency segments were selected out, they were: palladium electrode in 1 Hz frequency segment, tungsten electrode in 100 Hz and silver electrode in 100 Hz. Then 10 species of pathogenic Vibrio were discriminated by the 3 models. The V. damsela, V. metschnikovii, V. alginalyticus, V. cincinnatiensis, V. metschnikovii and V. cholerae O serogroup samples could be discriminated by the SIMCA model of V. parahaemolyticus with palladium electrode 1 Hz frequency segment; V. mimicus and V. vulnincus samples could be discriminated by the SIMCA model of V. parahaemolyticus with tungsten electrode 100 Hz frequency segment; V. carcariae and V. cholerae non-O serogroup samples could be discriminated with the SIMCA model of V. parahaemolyticus in silver electrode 100 Hz frequency segment. The accurate discrimination of ten species of Vibrio samples is 100%. The Smartongue combined with SIMCA can discriminate V. parahaemolyticus with other pathogenic Vibrio effectively. It has a promising future as a new rapid detection method for V. parahaemolyticus.

  2. The design of a research water table

    NASA Technical Reports Server (NTRS)

    Fike, R. L.; Kinney, R. B.; Perkins, H. C.

    1973-01-01

    A complete design for a research water table is presented. Following a brief discussion of the analogy between water and compressible-gas flows (hydraulic analogy), the components of the water table and their function are described. The major design considerations are discussed, and the final design is presented.

  3. Emergent Verbal Behavior and Analogy: Skinnerian and Linguistic Approaches

    PubMed Central

    Matos, Maria Amelia; de Lourdes Passos, Maria

    2010-01-01

    The production of verbal operants not previously taught is an important aspect of language productivity. For Skinner, new mands, tacts, and autoclitics result from the recombination of verbal operants. The relation between these mands, tacts, and autoclitics is what linguists call analogy, a grammatical pattern that serves as a foundation on which a speaker might emit new linguistic forms. Analogy appears in linguistics as a regularity principle that characterizes language and has been related to how languages change and also to creativity. The approaches of neogrammarians like Hermann Paul, as well as those of Jespersen and Bloomfield, appear to have influenced Skinner's understanding of verbal creativity. Generalization and stimulus equivalence are behavioral processes related to the generative grammatical behavior described in the analogy model. Linguistic forms and grammatical patterns described in analogy are part of the contingencies of reinforcement that produce generalization and stimulus equivalence. The analysis of verbal behavior needs linguistic analyses of the constituents of linguistic forms and their combination patterns. PMID:22479127

  4. Inhibition of Delta-induced Notch signaling using fucose analogs

    PubMed Central

    Schneider, Michael; Kumar, Vivek; Nordstrøm, Lars Ulrik; Feng, Lei; Takeuchi, Hideyuki; Hao, Huilin; Luca, Vincent C.; Garcia, K. Christopher; Stanley, Pamela; Wu, Peng; Haltiwanger, Robert S.

    2017-01-01

    Notch is a cell-surface receptor that controls cell fate decisions and is regulated by O-glycans attached to epidermal growth factor-like (EGF) repeats in its extracellular domain. Protein O-fucosyltransferase 1 (Pofut1) modifies EGF repeats with O-fucose and is essential for Notch signaling. Constitutive activation of Notch signaling has been associated with a variety of human malignancies. Therefore, tools for inhibiting Notch activity are being developed as cancer therapeutics. Towards this end, we screened L-fucose analogs for their effects on Notch signaling. Two analogs, 6-alkynyl and 6-alkenyl fucose, were substrates of Pofut1 and were incorporated directly into Notch EGF repeats in cells. Both analogs were potent inhibitors of binding to and activation of Notch1 by Notch ligands Dll1 and Dll4, but not by Jag1. Mutagenesis and modeling studies suggest that incorporation of the analogs into EGF8 of Notch1 markedly reduces the ability of Delta ligands to bind and activate Notch1. PMID:29176671

  5. The Pulley Analogy Does Not Work for Every Siphon

    ERIC Educational Resources Information Center

    Planinsic, Gorazd; Slisko, Josip

    2010-01-01

    How do siphons work? Some see atmospheric pressure, explicitly or implicitly, as a crucial factor in siphon action. Others explain that a siphon works due to a difference of water weights in unequal arms. According to the latter view, siphon action is analogous to the action of a pulley or to the behaviour of a chain that is moving over a tube. In…

  6. Using analog flow experiments to model morphologies developed during episodic dome growth: A case study of Mount St Helens, 1980-1986

    NASA Astrophysics Data System (ADS)

    Altman, K. M.; Teasdale, R.

    2009-12-01

    From 1980 to 1986 the dacite dome at Mount St. Helens was emplaced as a series of 17 events, identified by different growth rates, volumes, height to diameter ratios, emplacement rates, surface textures and dome morphologies (Swanson, 1989). Rates of emplacement characterize three periods; between October 18, 1980 and the end of 1981 the growth rate was 1.8 x 10^6 m^3/month; between March 1982 and March 1984 the growth rate was 1.3 x 10^6 m^3/month; followed by a growth rate of 0.62 x 10^6 m^3/month until the end of the emplacement events in 1986 (Swanson, 1989). The shape of the dome changed from 1980 to 1986 as a function of magma viscosity, tensile strength of the hot core, and thickness of the outer shell (Swanson, 1989). The height to diameter ratios (h:d) recorded throughout the growth of the dome have been used to quantify the changes in the shape of the dome. The dome was flatter during the first period of emplacement when larger volumes kept the dome hotter and hindered the formation of a thick, cool outer crust (Swanson, 1989). Once the growth rate slowed by June 1981, a thick skin had formed and allowed the dome to steepen (Swanson, 1989). Analog models presented here aim to reproduce the emplacement of the domes based on observations and data recorded at Mount St. Helens from 1980 to 1986. Flow experiments use a slurry of PEG (poly-ethelyne glycol) mixed with kaolin powder that is pumped into a tank of cold water (Fink and Griffiths, 1998). PEG is used because it is liquid at room temperature and solidifies in the cold water. Kaolin powder is added to the PEG to simulate the viscosity of the dacite domes. The observed and recorded data from Mount St. Helens are used to constrain analog flow model parameters such as slope, effusion rate, and PEG viscosity in an attempt to recreate the dome morphologies observed in the 1980 to 1986 episodes. As expected, dome morphology in experiments varies with the crustal thickness developed during experiments. The

  7. A CLASSICAL ANALOG FOR RELATIVISTIC CONTRACTION

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Epstein, L.

    1963-12-01

    It is possible to construct a mechanical model that demonstrates the Fitzgerald contraction. An equation is derived to describe the shape of a dimple moving across an elastic membrane, clearly showing the analogy to the field of a point charge in free space, including the relativistic contraction in the direction of motion. This model should suggest some reason to the inquiring mind that persists in wondering---- what really makes it shrink.'' (auth)

  8. Analogy Just Looks Like High Level Perception: Why a Domain-General Approach to Analogical Mapping is Right

    DTIC Science & Technology

    1998-01-01

    rerepresentation processes) will be able to use analogy better than those who have not. There is some psychological evidence for this gentrification of knowledge... useful as a technical proposal. We focus on five issues: (1) how perception relates to analogy, (2) how flexibility arises in analogical processing, (3...whether analogy is a domain-general process, (4) how should micro-worlds be used in the study of analogy, and (5) how best to assess the psychological

  9. Fast Rotational Diffusion of Water Molecules in a 2D Hydrogen Bond Network at Cryogenic Temperatures

    NASA Astrophysics Data System (ADS)

    Prisk, T. R.; Hoffmann, C.; Kolesnikov, A. I.; Mamontov, E.; Podlesnyak, A. A.; Wang, X.; Kent, P. R. C.; Anovitz, L. M.

    2018-05-01

    Individual water molecules or small clusters of water molecules contained within microporous minerals present an extreme case of confinement where the local structure of hydrogen bond networks are dramatically altered from bulk water. In the zinc silicate hemimorphite, the water molecules form a two-dimensional hydrogen bond network with hydroxyl groups in the crystal framework. Here, we present a combined experimental and theoretical study of the structure and dynamics of water molecules within this network. The water molecules undergo a continuous phase transition in their orientational configuration analogous to a two-dimensional Ising model. The incoherent dynamic structure factor reveals two thermally activated relaxation processes, one on a subpicosecond timescale and another on a 10-100 ps timescale, between 70 and 130 K. The slow process is an in-plane reorientation of the water molecule involving the breaking of hydrogen bonds with a framework that, despite the low temperatures involved, is analogous to rotational diffusion of water molecules in the bulk liquid. The fast process is a localized motion of the water molecule with no apparent analogs among known bulk or confined phases of water.

  10. Fast Rotational Diffusion of Water Molecules in a 2D Hydrogen Bond Network at Cryogenic Temperatures

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Prisk, Timothy; Hoffmann, Christina; Kolesnikov, Alexander I.

    Individual water molecules or small clusters of water molecules contained within microporous minerals present an extreme case of confinement where the local structure of hydrogen bond networks are dramatically altered from bulk water. In the zinc silicate hemimorphite, the water molecules form a two-dimensional hydrogen bond network with hydroxyl groups in the crystal framework. Here in this paper, we present a combined experimental and theoretical study of the structure and dynamics of water molecules within this network. The water molecules undergo a continuous phase transition in their orientational configuration analogous to a two-dimensional Ising model. The incoherent dynamic structure factormore » reveals two thermally activated relaxation processes, one on a subpicosecond timescale and another on a 10–100 ps timescale, between 70 and 130 K. The slow process is an in-plane reorientation of the water molecule involving the breaking of hydrogen bonds with a framework that, despite the low temperatures involved, is analogous to rotational diffusion of water molecules in the bulk liquid. The fast process is a localized motion of the water molecule with no apparent analogs among known bulk or confined phases of water.« less

  11. Fast Rotational Diffusion of Water Molecules in a 2D Hydrogen Bond Network at Cryogenic Temperatures

    DOE PAGES

    Prisk, Timothy; Hoffmann, Christina; Kolesnikov, Alexander I.; ...

    2018-05-09

    Individual water molecules or small clusters of water molecules contained within microporous minerals present an extreme case of confinement where the local structure of hydrogen bond networks are dramatically altered from bulk water. In the zinc silicate hemimorphite, the water molecules form a two-dimensional hydrogen bond network with hydroxyl groups in the crystal framework. Here in this paper, we present a combined experimental and theoretical study of the structure and dynamics of water molecules within this network. The water molecules undergo a continuous phase transition in their orientational configuration analogous to a two-dimensional Ising model. The incoherent dynamic structure factormore » reveals two thermally activated relaxation processes, one on a subpicosecond timescale and another on a 10–100 ps timescale, between 70 and 130 K. The slow process is an in-plane reorientation of the water molecule involving the breaking of hydrogen bonds with a framework that, despite the low temperatures involved, is analogous to rotational diffusion of water molecules in the bulk liquid. The fast process is a localized motion of the water molecule with no apparent analogs among known bulk or confined phases of water.« less

  12. Structural modelling and comparative analysis of homologous, analogous and specific proteins from Trypanosoma cruzi versus Homo sapiens: putative drug targets for chagas' disease treatment.

    PubMed

    Capriles, Priscila V S Z; Guimarães, Ana C R; Otto, Thomas D; Miranda, Antonio B; Dardenne, Laurent E; Degrave, Wim M

    2010-10-29

    Trypanosoma cruzi is the etiological agent of Chagas' disease, an endemic infection that causes thousands of deaths every year in Latin America. Therapeutic options remain inefficient, demanding the search for new drugs and/or new molecular targets. Such efforts can focus on proteins that are specific to the parasite, but analogous enzymes and enzymes with a three-dimensional (3D) structure sufficiently different from the corresponding host proteins may represent equally interesting targets. In order to find these targets we used the workflows MHOLline and AnEnΠ obtaining 3D models from homologous, analogous and specific proteins of Trypanosoma cruzi versus Homo sapiens. We applied genome wide comparative modelling techniques to obtain 3D models for 3,286 predicted proteins of T. cruzi. In combination with comparative genome analysis to Homo sapiens, we were able to identify a subset of 397 enzyme sequences, of which 356 are homologous, 3 analogous and 38 specific to the parasite. In this work, we present a set of 397 enzyme models of T. cruzi that can constitute potential structure-based drug targets to be investigated for the development of new strategies to fight Chagas' disease. The strategies presented here support the concept of structural analysis in conjunction with protein functional analysis as an interesting computational methodology to detect potential targets for structure-based rational drug design. For example, 2,4-dienoyl-CoA reductase (EC 1.3.1.34) and triacylglycerol lipase (EC 3.1.1.3), classified as analogous proteins in relation to H. sapiens enzymes, were identified as new potential molecular targets.

  13. Analogical reasoning in children with specific language impairment: Evidence from a scene analogy task.

    PubMed

    Krzemien, Magali; Jemel, Boutheina; Maillart, Christelle

    2017-01-01

    Analogical reasoning is a human ability that maps systems of relations. It develops along with relational knowledge, working memory and executive functions such as inhibition. It also maintains a mutual influence on language development. Some authors have taken a greater interest in the analogical reasoning ability of children with language disorders, specifically those with specific language impairment (SLI). These children apparently have weaker analogical reasoning abilities than their aged-matched peers without language disorders. Following cognitive theories of language acquisition, this deficit could be one of the causes of language disorders in SLI, especially those concerning productivity. To confirm this deficit and its link to language disorders, we use a scene analogy task to evaluate the analogical performance of SLI children and compare them to controls of the same age and linguistic abilities. Results show that children with SLI perform worse than age-matched peers, but similar to language-matched peers. They are more influenced by increased task difficulty. The association between language disorders and analogical reasoning in SLI can be confirmed. The hypothesis of limited processing capacity in SLI is also being considered.

  14. Science Teachers' Analogical Reasoning

    ERIC Educational Resources Information Center

    Mozzer, Nilmara Braga; Justi, Rosária

    2013-01-01

    Analogies can play a relevant role in students' learning. However, for the effective use of analogies, teachers should not only have a well-prepared repertoire of validated analogies, which could serve as bridges between the students' prior knowledge and the scientific knowledge they desire them to understand, but also know how to…

  15. Conformational analysis of endomorphin-2 analogs with phenylalanine mimics by NMR and molecular modeling.

    PubMed

    Shao, Xuan; Gao, Yanfeng; Zhu, Chuanjun; Liu, Xuehui; Yao, Jinlong; Cui, Yuxin; Wang, Rui

    2007-05-15

    We investigated a series of conformations of endomorphin-2 (EM-2) analogs substituted by phenylglycine (Phg) and homophenylalanine (Hfe) in the position 3 or 4 by two-dimensional (1)H NMR spectroscopy and molecular modeling. Evaluating the aromatic interactions and the dihedral angles in these phenylalanine mimics, we have observed that the conformations in trans isomer have varied from extended to folded as bioactivity decreases. It is suggested that the flexibility of aromatic side chain affects the backbone of EM-2 to adopt folded structures, which may block the ligands in binding to micro-opioid receptor.

  16. Architecture of PFC supports analogy, but PFC is not an analogy machine.

    PubMed

    Speed, Ann

    2010-06-01

    In the preceding discussion paper, I proposed a theory of prefrontal cortical organization that was fundamentally intended to address the question: How does prefrontal cortex (PFC) support the various functions for which it seems to be selectively recruited? In so doing, I chose to focus on a particular function, analogy, that seems to have been largely ignored in the theoretical treatments of PFC, but that does underlie many other cognitive functions (Hofstadter, 2001 ; Holyoak & Thagard, 1997 ). At its core, this paper was intended to use analogy as a foundation for exploring one possibility for prefrontal function in general, although it is easy to see how the analogy-specific interpretation arises (as in the comment by Ibáñez). In an attempt to address this more foundational question, this response will step away from analogy as a focus, and will address first the various comments from the perspective of the initial motivation for developing this theory, and then specific issues raised by the commentators.

  17. Lessons from Natural Analog Studies for Geologic Disposal of High-Level Nuclear Waste (Invited)

    NASA Astrophysics Data System (ADS)

    Murphy, W. M.

    2009-12-01

    For over fifty years natural analog studies have provided lessons addressing scientific, technical, and social problems concerning geologic disposal of high-level nuclear waste. Idealized concepts for permanent disposal environments evolved from an understanding of the geological, geochemical and hydrological characteristics of analogous rocks including natural salt deposits (as advocated by the US National Academy of Sciences in 1957), ancient cratonic rocks (as investigated at Lac du Bonnet, Canada, Aspö, Sweden, and Vienne, France), and marine sedimentary rock formations (as studied at Mol, Belgium, and Bure, France). Additional multidisciplinary studies have been conducted at natural sites that bear characteristics analogous to potential repository systems, notably at natural uranium (and thorium) deposits including Poços de Caldas, Brazil, Alligator Rivers, Australia, Peña Blanca, Mexico, and Oklo, Gabon. Researchers of natural analogs for geologic disposal have addressed technical uncertainties regarding processes that have transpired over large time and space scales, which are generally inaccessible to laboratory studies. Principal questions for nuclear waste disposal include the geochemical stability and alteration rates of radionuclide bearing minerals and the mechanisms and rates of transport of radionuclides in groundwater. In their most direct applications, natural analogs studies have been devoted to testing specific models for repository performance and the experimental data that support those models. Parameters used in predictive performance assessment modeling have been compared to natural system data, including mineral solubilities, sorption coefficients, diffusion rates, and colloid transport properties. For example, the rate of uraninite oxidation and the natural paragenesis of uranium mineral alteration at Peña Blanca have been compared favorably to results of experimental studies of spent fuel alteration related to the proposed repository

  18. All-optical analog comparator.

    PubMed

    Li, Pu; Yi, Xiaogang; Liu, Xianglian; Zhao, Dongliang; Zhao, Yongpeng; Wang, Yuncai

    2016-08-23

    An analog comparator is one of the core units in all-optical analog-to-digital conversion (AO-ADC) systems, which digitizes different amplitude levels into two levels of logical '1' or '0' by comparing with a defined decision threshold. Although various outstanding photonic ADC approaches have been reported, almost all of them necessitate an electrical comparator to carry out this binarization. The use of an electrical comparator is in contradiction to the aim of developing all-optical devices. In this work, we propose a new concept of an all-optical analog comparator and numerically demonstrate an implementation based on a quarter-wavelength-shifted distributed feedback laser diode (QWS DFB-LD) with multiple quantum well (MQW) structures. Our results show that the all-optical comparator is very well suited for true AO-ADCs, enabling the whole digital conversion from an analog optical signal (continuous-time signal or discrete pulse signal) to a binary representation totally in the optical domain. In particular, this all-optical analog comparator possesses a low threshold power (several mW), high extinction ratio (up to 40 dB), fast operation rate (of the order of tens of Gb/s) and a step-like transfer function.

  19. Varieties of noise: analogical reasoning in synthetic biology.

    PubMed

    Knuuttila, Tarja; Loettgers, Andrea

    2014-12-01

    The picture of synthetic biology as a kind of engineering science has largely created the public understanding of this novel field, covering both its promises and risks. In this paper, we will argue that the actual situation is more nuanced and complex. Synthetic biology is a highly interdisciplinary field of research located at the interface of physics, chemistry, biology, and computational science. All of these fields provide concepts, metaphors, mathematical tools, and models, which are typically utilized by synthetic biologists by drawing analogies between the different fields of inquiry. We will study analogical reasoning in synthetic biology through the emergence of the functional meaning of noise, which marks an important shift in how engineering concepts are employed in this field. The notion of noise serves also to highlight the differences between the two branches of synthetic biology: the basic science-oriented branch and the engineering-oriented branch, which differ from each other in the way they draw analogies to various other fields of study. Moreover, we show that fixing the mapping between a source domain and the target domain seems not to be the goal of analogical reasoning in actual scientific practice.

  20. The Nitty Gritty: How We Make Analogs Work

    NASA Technical Reports Server (NTRS)

    Self, A. L.; Huppman, S. R.; Spence, L. A.

    2017-01-01

    NASA's Human Research Program (HRP) is becoming increasingly reliant on Isolated, Confined and Controlled (ICC) analogs to accomplish many of its research objectives. Compared to other research platforms, ICC analogs present a unique set of operational challenges that must be addressed in order to ensure a high fidelity research environment. In particular, the Human Exploration Research Analog (HERA) habitat, which is classified as an ICC environment, has been developed over the past three years to accommodate the operational needs of research investigations from each of the HRP Elements. During the development period, various types of requirements have contributed to the current operational model, which strives to achieve the highest possible level of mission fidelity with limited resources. This presentation will focus on the operational aspects of the HERA habitat, with emphasis on how we develop the analog research environment to meet researchers' needs. Specific discussion topics include mission scenario development, operational tasks, mission timeline integration, stressor implementation, console support, and improvements based on lessons learned. The information is intended to help investigators better understand the details behind HERA operations and the benefits to their research goals.

  1. Benchmarking test of empirical root water uptake models

    NASA Astrophysics Data System (ADS)

    dos Santos, Marcos Alex; de Jong van Lier, Quirijn; van Dam, Jos C.; Freire Bezerra, Andre Herman

    2017-01-01

    Detailed physical models describing root water uptake (RWU) are an important tool for the prediction of RWU and crop transpiration, but the hydraulic parameters involved are hardly ever available, making them less attractive for many studies. Empirical models are more readily used because of their simplicity and the associated lower data requirements. The purpose of this study is to evaluate the capability of some empirical models to mimic the RWU distribution under varying environmental conditions predicted from numerical simulations with a detailed physical model. A review of some empirical models used as sub-models in ecohydrological models is presented, and alternative empirical RWU models are proposed. All these empirical models are analogous to the standard Feddes model, but differ in how RWU is partitioned over depth or how the transpiration reduction function is defined. The parameters of the empirical models are determined by inverse modelling of simulated depth-dependent RWU. The performance of the empirical models and their optimized empirical parameters depends on the scenario. The standard empirical Feddes model only performs well in scenarios with low root length density R, i.e. for scenarios with low RWU compensation. For medium and high R, the Feddes RWU model cannot mimic properly the root uptake dynamics as predicted by the physical model. The Jarvis RWU model in combination with the Feddes reduction function (JMf) only provides good predictions for low and medium R scenarios. For high R, it cannot mimic the uptake patterns predicted by the physical model. Incorporating a newly proposed reduction function into the Jarvis model improved RWU predictions. Regarding the ability of the models to predict plant transpiration, all models accounting for compensation show good performance. The Akaike information criterion (AIC) indicates that the Jarvis (2010) model (JMII), with no empirical parameters to be estimated, is the best model. The

  2. A versatile method for the preparation of conjugates of peptides with DNA/PNA/analog by employing chemo-selective click reaction in water

    PubMed Central

    Gogoi, Khirud; Mane, Meenakshi V.; Kunte, Sunita S.; Kumar, Vaijayanti A.

    2007-01-01

    The specific 1,3 dipolar Hüisgen cycloaddition reaction known as ‘click-reaction’ between azide and alkyne groups is employed for the synthesis of peptide–oligonucleotide conjugates. The peptide nucleic acids (PNA)/DNA and peptides may be appended either by azide or alkyne groups. The cycloaddition reaction between the azide and alkyne appended substrates allows the synthesis of the desired conjugates in high purity and yields irrespective of the sequence and functional groups on either of the two substrates. The versatile approach could also be employed to generate the conjugates of peptides with thioacetamido nucleic acid (TANA) analog. The click reaction is catalyzed by Cu (I) in either water or in organic medium. In water, ∼3-fold excess of the peptide-alkyne/azide drives the reaction to completion in 2 h with no side products. PMID:17981837

  3. Students' Pre- and Post-Teaching Analogical Reasoning when They Draw Their Analogies

    ERIC Educational Resources Information Center

    Mozzer, Nilmara Braga; Justi, Rosaria

    2012-01-01

    Analogies are parts of human thought. From them, we can acquire new knowledge or change that which already exists in our cognitive structure. In this sense, understanding the analogical reasoning process becomes an essential condition to understand how we learn. Despite the importance of such an understanding, there is no general agreement in…

  4. Physiological water model development

    NASA Technical Reports Server (NTRS)

    Doty, Susan

    1993-01-01

    The water of the human body can be categorized as existing in two main compartments: intracellular water and extracellular water. The intracellular water consists of all the water within the cells and constitutes over half of the total body water. Since red blood cells are surrounded by plasma, and all other cells are surrounded by interstitial fluid, the intracellular compartment has been subdivided to represent these two cell types. The extracellular water, which includes all of the fluid outside of the cells, can be further subdivided into compartments which represent the interstitial fluid, circulating blood plasma, lymph, and transcellular water. The interstitial fluid surrounds cells outside of the vascular system whereas plasma is contained within the blood vessels. Avascular tissues such as dense connective tissue and cartilage contain interstitial water which slowly equilibrates with tracers used to determine extracellular fluid volume. For this reason, additional compartments are sometimes used to represent these avascular tissues. The average size of each compartment, in terms of percent body weight, has been determined for adult males and females. These compartments and the forces which cause flow between them are presented. The kidneys, a main compartment, receive about 25 percent of the cardiac output and filters out a fluid similar to plasma. The composition of this filtered fluid changes as it flows through the kidney tubules since compounds are continually being secreted and reabsorbed. Through this mechanism, the kidneys eliminate wastes while conserving body water, electrolytes, and metabolites. Since sodium accounts for over 90 percent of the cations in the extracellular fluid, and the number of cations is balanced by the number of anions, considering the renal handling sodium and water only should sufficiently describe the relationship between the plasma compartment and kidneys. A kidney function model is presented which has been adapted from a

  5. Structural modelling and comparative analysis of homologous, analogous and specific proteins from Trypanosoma cruzi versus Homo sapiens: putative drug targets for chagas' disease treatment

    PubMed Central

    2010-01-01

    Background Trypanosoma cruzi is the etiological agent of Chagas' disease, an endemic infection that causes thousands of deaths every year in Latin America. Therapeutic options remain inefficient, demanding the search for new drugs and/or new molecular targets. Such efforts can focus on proteins that are specific to the parasite, but analogous enzymes and enzymes with a three-dimensional (3D) structure sufficiently different from the corresponding host proteins may represent equally interesting targets. In order to find these targets we used the workflows MHOLline and AnEnΠ obtaining 3D models from homologous, analogous and specific proteins of Trypanosoma cruzi versus Homo sapiens. Results We applied genome wide comparative modelling techniques to obtain 3D models for 3,286 predicted proteins of T. cruzi. In combination with comparative genome analysis to Homo sapiens, we were able to identify a subset of 397 enzyme sequences, of which 356 are homologous, 3 analogous and 38 specific to the parasite. Conclusions In this work, we present a set of 397 enzyme models of T. cruzi that can constitute potential structure-based drug targets to be investigated for the development of new strategies to fight Chagas' disease. The strategies presented here support the concept of structural analysis in conjunction with protein functional analysis as an interesting computational methodology to detect potential targets for structure-based rational drug design. For example, 2,4-dienoyl-CoA reductase (EC 1.3.1.34) and triacylglycerol lipase (EC 3.1.1.3), classified as analogous proteins in relation to H. sapiens enzymes, were identified as new potential molecular targets. PMID:21034488

  6. WaterSense Program: Methodology for National Water Savings Analysis Model Indoor Residential Water Use

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Whitehead, Camilla Dunham; McNeil, Michael; Dunham_Whitehead, Camilla

    2008-02-28

    The U.S. Environmental Protection Agency (EPA) influences the market for plumbing fixtures and fittings by encouraging consumers to purchase products that carry the WaterSense label, which certifies those products as performing at low flow rates compared to unlabeled fixtures and fittings. As consumers decide to purchase water-efficient products, water consumption will decline nationwide. Decreased water consumption should prolong the operating life of water and wastewater treatment facilities.This report describes the method used to calculate national water savings attributable to EPA?s WaterSense program. A Microsoft Excel spreadsheet model, the National Water Savings (NWS) analysis model, accompanies this methodology report. Version 1.0more » of the NWS model evaluates indoor residential water consumption. Two additional documents, a Users? Guide to the spreadsheet model and an Impacts Report, accompany the NWS model and this methodology document. Altogether, these four documents represent Phase One of this project. The Users? Guide leads policy makers through the spreadsheet options available for projecting the water savings that result from various policy scenarios. The Impacts Report shows national water savings that will result from differing degrees of market saturation of high-efficiency water-using products.This detailed methodology report describes the NWS analysis model, which examines the effects of WaterSense by tracking the shipments of products that WaterSense has designated as water-efficient. The model estimates market penetration of products that carry the WaterSense label. Market penetration is calculated for both existing and new construction. The NWS model estimates savings based on an accounting analysis of water-using products and of building stock. Estimates of future national water savings will help policy makers further direct the focus of WaterSense and calculate stakeholder impacts from the program.Calculating the total gallons of

  7. Connecting long distance: semantic distance in analogical reasoning modulates frontopolar cortex activity.

    PubMed

    Green, Adam E; Kraemer, David J M; Fugelsang, Jonathan A; Gray, Jeremy R; Dunbar, Kevin N

    2010-01-01

    Solving problems often requires seeing new connections between concepts or events that seemed unrelated at first. Innovative solutions of this kind depend on analogical reasoning, a relational reasoning process that involves mapping similarities between concepts. Brain-based evidence has implicated the frontal pole of the brain as important for analogical mapping. Separately, cognitive research has identified semantic distance as a key characteristic of the kind of analogical mapping that can support innovation (i.e., identifying similarities across greater semantic distance reveals connections that support more innovative solutions and models). However, the neural substrates of semantically distant analogical mapping are not well understood. Here, we used functional magnetic resonance imaging (fMRI) to measure brain activity during an analogical reasoning task, in which we parametrically varied the semantic distance between the items in the analogies. Semantic distance was derived quantitatively from latent semantic analysis. Across 23 participants, activity in an a priori region of interest (ROI) in left frontopolar cortex covaried parametrically with increasing semantic distance, even after removing effects of task difficulty. This ROI was centered on a functional peak that we previously associated with analogical mapping. To our knowledge, these data represent a first empirical characterization of how the brain mediates semantically distant analogical mapping.

  8. All-optical analog comparator

    PubMed Central

    Li, Pu; Yi, Xiaogang; Liu, Xianglian; Zhao, Dongliang; Zhao, Yongpeng; Wang, Yuncai

    2016-01-01

    An analog comparator is one of the core units in all-optical analog-to-digital conversion (AO-ADC) systems, which digitizes different amplitude levels into two levels of logical ‘1’ or ‘0’ by comparing with a defined decision threshold. Although various outstanding photonic ADC approaches have been reported, almost all of them necessitate an electrical comparator to carry out this binarization. The use of an electrical comparator is in contradiction to the aim of developing all-optical devices. In this work, we propose a new concept of an all-optical analog comparator and numerically demonstrate an implementation based on a quarter-wavelength-shifted distributed feedback laser diode (QWS DFB-LD) with multiple quantum well (MQW) structures. Our results show that the all-optical comparator is very well suited for true AO-ADCs, enabling the whole digital conversion from an analog optical signal (continuous-time signal or discrete pulse signal) to a binary representation totally in the optical domain. In particular, this all-optical analog comparator possesses a low threshold power (several mW), high extinction ratio (up to 40 dB), fast operation rate (of the order of tens of Gb/s) and a step-like transfer function. PMID:27550874

  9. All-optical analog comparator

    NASA Astrophysics Data System (ADS)

    Li, Pu; Yi, Xiaogang; Liu, Xianglian; Zhao, Dongliang; Zhao, Yongpeng; Wang, Yuncai

    2016-08-01

    An analog comparator is one of the core units in all-optical analog-to-digital conversion (AO-ADC) systems, which digitizes different amplitude levels into two levels of logical ‘1’ or ‘0’ by comparing with a defined decision threshold. Although various outstanding photonic ADC approaches have been reported, almost all of them necessitate an electrical comparator to carry out this binarization. The use of an electrical comparator is in contradiction to the aim of developing all-optical devices. In this work, we propose a new concept of an all-optical analog comparator and numerically demonstrate an implementation based on a quarter-wavelength-shifted distributed feedback laser diode (QWS DFB-LD) with multiple quantum well (MQW) structures. Our results show that the all-optical comparator is very well suited for true AO-ADCs, enabling the whole digital conversion from an analog optical signal (continuous-time signal or discrete pulse signal) to a binary representation totally in the optical domain. In particular, this all-optical analog comparator possesses a low threshold power (several mW), high extinction ratio (up to 40 dB), fast operation rate (of the order of tens of Gb/s) and a step-like transfer function.

  10. Preliminary ECLSS waste water model

    NASA Technical Reports Server (NTRS)

    Carter, Donald L.; Holder, Donald W., Jr.; Alexander, Kevin; Shaw, R. G.; Hayase, John K.

    1991-01-01

    A preliminary waste water model for input to the Space Station Freedom (SSF) Environmental Control and Life Support System (ECLSS) Water Processor (WP) has been generated for design purposes. Data have been compiled from various ECLSS tests and flight sample analyses. A discussion of the characterization of the waste streams comprising the model is presented, along with a discussion of the waste water model and the rationale for the inclusion of contaminants in their respective concentrations. The major objective is to establish a methodology for the development of a waste water model and to present the current state of that model.

  11. A one-dimensional diffusion analogy model for estimation of tide heights in selected tidal marshes in Connecticut

    USGS Publications Warehouse

    Bjerklie, David M.; O’Brien, Kevin; Rozsa, Ron

    2013-01-01

    A one-dimensional diffusion analogy model for estimating tide heights in coastal marshes was developed and calibrated by using data from previous tidal-marsh studies. The method is simpler to use than other one- and two-dimensional hydrodynamic models because it does not require marsh depth and tidal prism information; however, the one-dimensional diffusion analogy model cannot be used to estimate tide heights, flow velocities, and tide arrival times for tide conditions other than the highest tide for which it is calibrated. Limited validation of the method indicates that it has an accuracy within 0.3 feet. The method can be applied with limited calibration information that is based entirely on remote sensing or geographic information system data layers. The method can be used to estimate high-tide heights in tidal wetlands drained by tide gates where tide levels cannot be observed directly by opening the gates without risk of flooding properties and structures. A geographic information system application of the method is demonstrated for Sybil Creek marsh in Branford, Connecticut. The tidal flux into this marsh is controlled by two tide gates that prevent full tidal inundation of the marsh. The method application shows reasonable tide heights for the gates-closed condition (the normal condition) and the one-gate-open condition on the basis of comparison with observed heights. The condition with all tide gates open (two gates) was simulated with the model; results indicate where several structures would be flooded if the gates were removed as part of restoration efforts or if the tide gates were to fail.

  12. Resistive RAMs as analog trimming elements

    NASA Astrophysics Data System (ADS)

    Aziza, H.; Perez, A.; Portal, J. M.

    2018-04-01

    This work investigates the use of Resistive Random Access Memory (RRAM) as an analog trimming device. The analog storage feature of the RRAM cell is evaluated and the ability of the RRAM to hold several resistance states is exploited to propose analog trim elements. To modulate the memory cell resistance, a series of short programming pulses are applied across the RRAM cell allowing a fine calibration of the RRAM resistance. The RRAM non volatility feature makes the analog device powers up already calibrated for the system in which the analog trimmed structure is embedded. To validate the concept, a test structure consisting of a voltage reference is evaluated.

  13. Analog to digital workflow improvement: a quantitative study.

    PubMed

    Wideman, Catherine; Gallet, Jacqueline

    2006-01-01

    This study tracked a radiology department's conversion from utilization of a Kodak Amber analog system to a Kodak DirectView DR 5100 digital system. Through the use of ProModel Optimization Suite, a workflow simulation software package, significant quantitative information was derived from workflow process data measured before and after the change to a digital system. Once the digital room was fully operational and the radiology staff comfortable with the new system, average patient examination time was reduced from 9.24 to 5.28 min, indicating that a higher patient throughput could be achieved. Compared to the analog system, chest examination time for modality specific activities was reduced by 43%. The percentage of repeat examinations experienced with the digital system also decreased to 8% vs. the level of 9.5% experienced with the analog system. The study indicated that it is possible to quantitatively study clinical workflow and productivity by using commercially available software.

  14. Individual differences in spontaneous analogical transfer.

    PubMed

    Kubricht, James R; Lu, Hongjing; Holyoak, Keith J

    2017-05-01

    Research on analogical problem solving has shown that people often fail to spontaneously notice the relevance of a semantically remote source analog when solving a target problem, although they are able to form mappings and derive inferences when given a hint to recall the source. Relatively little work has investigated possible individual differences that predict spontaneous transfer, or how such differences may interact with interventions that facilitate transfer. In this study, fluid intelligence was measured for participants in an analogical problem-solving task, using an abridged version of the Raven's Progressive Matrices (RPM) test. In two experiments, we systematically compared the effect of augmenting verbal descriptions of the source with animations or static diagrams. Solution rates to Duncker's radiation problem were measured across varying source presentation conditions, and participants' understanding of the relevant source material was assessed. The pattern of transfer was best fit by a moderated mediation model: the positive impact of fluid intelligence on spontaneous transfer was mediated by its influence on source comprehension; however, this path was in turn modulated by provision of a supplemental animation via its influence on comprehension of the source. Animated source depictions were most beneficial in facilitating spontaneous transfer for those participants with low scores on the fluid intelligence measure.

  15. Synthetic analog computation in living cells.

    PubMed

    Daniel, Ramiz; Rubens, Jacob R; Sarpeshkar, Rahul; Lu, Timothy K

    2013-05-30

    A central goal of synthetic biology is to achieve multi-signal integration and processing in living cells for diagnostic, therapeutic and biotechnology applications. Digital logic has been used to build small-scale circuits, but other frameworks may be needed for efficient computation in the resource-limited environments of cells. Here we demonstrate that synthetic analog gene circuits can be engineered to execute sophisticated computational functions in living cells using just three transcription factors. Such synthetic analog gene circuits exploit feedback to implement logarithmically linear sensing, addition, ratiometric and power-law computations. The circuits exhibit Weber's law behaviour as in natural biological systems, operate over a wide dynamic range of up to four orders of magnitude and can be designed to have tunable transfer functions. Our circuits can be composed to implement higher-order functions that are well described by both intricate biochemical models and simple mathematical functions. By exploiting analog building-block functions that are already naturally present in cells, this approach efficiently implements arithmetic operations and complex functions in the logarithmic domain. Such circuits may lead to new applications for synthetic biology and biotechnology that require complex computations with limited parts, need wide-dynamic-range biosensing or would benefit from the fine control of gene expression.

  16. Consecutive Short-Scan CT for Geological Structure Analog Models with Large Size on In-Situ Stage.

    PubMed

    Yang, Min; Zhang, Wen; Wu, Xiaojun; Wei, Dongtao; Zhao, Yixin; Zhao, Gang; Han, Xu; Zhang, Shunli

    2016-01-01

    For the analysis of interior geometry and property changes of a large-sized analog model during a loading or other medium (water or oil) injection process with a non-destructive way, a consecutive X-ray computed tomography (XCT) short-scan method is developed to realize an in-situ tomography imaging. With this method, the X-ray tube and detector rotate 270° around the center of the guide rail synchronously by switching positive and negative directions alternately on the way of translation until all the needed cross-sectional slices are obtained. Compared with traditional industrial XCTs, this method well solves the winding problems of high voltage cables and oil cooling service pipes during the course of rotation, also promotes the convenience of the installation of high voltage generator and cooling system. Furthermore, hardware costs are also significantly decreased. This kind of scanner has higher spatial resolution and penetrating ability than medical XCTs. To obtain an effective sinogram which matches rotation angles accurately, a structural similarity based method is applied to elimination of invalid projection data which do not contribute to the image reconstruction. Finally, on the basis of geometrical symmetry property of fan-beam CT scanning, a whole sinogram filling a full 360° range is produced and a standard filtered back-projection (FBP) algorithm is performed to reconstruct artifacts-free images.

  17. Neuron Bifurcations in an Analog Electronic Burster

    NASA Astrophysics Data System (ADS)

    Savino, Guillermo V.; Formigli, Carlos M.

    2007-05-01

    Although bursting electrical activity is typical in some brain neurons and biological excitable systems, its functions and mechanisms of generation are yet unknown. In modeling such complex oscillations, analog electronic models are faster than mathematical ones, whether phenomenologically or theoretically based. We show experimentally that bursting oscillator circuits can be greatly simplified by using the nonlinear characteristics of two bipolar transistors. Since our circuit qualitatively mimics Hodgkin and Huxley model neurons bursting activity, and bifurcations originating neuro-computational properties, it is not only a caricature but a realistic model.

  18. Design by Analogy: Achieving More Patentable Ideas from One Creative Design

    NASA Astrophysics Data System (ADS)

    Jia, Li-Zhen; Wu, Chun-Long; Zhu, Xue-Hong; Tan, Run-Hua

    2018-12-01

    A patent is a kind of technical document to protect intellectual property for individuals or enterprises. Patentable idea generation is a crucial step for patent application and analogy is confirmed to be an effective technique to inspire creative ideas. Analogy-based design usually starts from representation of an analogy source and is followed by the retrieval of appropriate analogs, mapping of design knowledge and adaptation of target solution. To diffuse one core idea into other new contexts and achieve more patentable ideas, this paper mainly centered on the first two stages of analogy-based design and proposed a patentable ideation framework. The analogical information of the source system, including source design problems and solution, was mined comprehensively through International Patent Classification analysis and represented in the form of function, behavior and structure. Three heuristics were suggested for searching the set of candidate target systems with a similar design problem, where the source design could be transferred. To systematize the process of source representation, analogs retrieval, idea transfer, and solution generation, an ideation model was put forward. Finally, the bladeless fan was selected as a source design to illustrate the application of this work. The design output shows that the representation and heuristics are beneficial, and this systematic ideation method can help the engineer or designer enhance creativity and discover more patentable opportunities.

  19. Novel designed VmCT1 analogs with increased antimicrobial activity.

    PubMed

    Pedron, Cibele Nicolaski; Torres, Marcelo Der Torossian; Lima, Julia Aparecida da Silva; Silva, Pedro Ismael; Silva, Fernanda Dias; Oliveira, Vani Xavier

    2017-01-27

    Antimicrobial peptides are biologically active molecules produced by a wide range of organisms as an essential component of the innate immune response. They have recently attracted great interest, since they have antimicrobial activity against a broad spectrum of microorganisms. VmCT1 is a cationic peptide from the venom of Vaejovis mexicanus smithi scorpions, which presents antibacterial activity and tends to helical structures. Its analogs were synthesized, characterized and the conformational studies were performed by circular dichroism. The peptides were designed to verify if the single and double substitutions proposed at the hydrophilic and hydrophobic portions of the amphipathic structure would alter antimicrobial activity against Gram-negative and Gram-positive bacteria, yeast and filamentous fungus, besides the hemolytic activity in human erythrocytes. Total charge of the peptides were modified from +2 to +3 by the introduction of a Lysine residue in the hydrophilic face of the amphiphilic helical structure leading to enhanced antimicrobial activity. [K] 11 -VmCT1-NH 2 presented the lower MIC value against the microorganisms (from 0.39 to 6.25 μmol L -1 ), however it showed higher hemolytic activity. The other Lysine-substituted analogs presented also lower MIC values ranging from 0.39 to 25 μmol L -1 for the microorganisms assessed. The circular dichroism spectra analyses suggest that the Lysine-substituted analogs tend to adopt helical structures in trifluoroethanol solution and vesicles (f H : 0.43-1), however they were coiled in water. Alanine substitution by a Glutamic acid residue in the hydrophilic face promotes the increase of polar angle in [E] 4 -VmCT1-NH 2 analog, which was important to led lower hemolytic activity (MHC value = 25 μmol L -1 ). [W] 9 -VmCT1-NH 2 and [E] 4 [W] 9 -VmCT1-NH 2 were designed to favors hydrophobic interactions by the introduction of Tryptophan residue. [W] 9 -VmCT1-NH 2 presented MIC values lower or

  20. Analog Nonvolatile Computer Memory Circuits

    NASA Technical Reports Server (NTRS)

    MacLeod, Todd

    2007-01-01

    , between the positive and negative FFET saturation values. This signal value would represent a numerical value of interest corresponding to multiple bits: for example, if the memory circuit were designed to distinguish among 16 different analog values, then each cell could store 4 bits. Simultaneously with writing the signal value in the storage FFET, a negative saturation signal value would be stored in the control FFET. The decay of this control-FFET signal from the saturation value would serve as a model of the decay, for use in regenerating the numerical value of interest from its decaying analog signal value. The memory circuit would include addressing, reading, and writing circuitry that would have features in common with the corresponding parts of other memory circuits, but would also have several distinctive features. The writing circuitry would include a digital-to-analog converter (DAC); the reading circuitry would include an analog-to-digital converter (ADC). For writing a numerical value of interest in a given cell, that cell would be addressed, the saturation value would be written in the control FFET in that cell, and the non-saturation analog value representing the numerical value of interest would be generated by use of the DAC and stored in the storage FFET in that cell. For reading the numerical value of interest stored in a given cell, the cell would be addressed, the ADC would convert the decaying control and storage analog signal values to digital values, and an associated fast digital processing circuit would regenerate the numerical value from digital values.

  1. [Magician nature and human magician: on a fundamental analogy of alchemy].

    PubMed

    Schott, Heinz

    2010-01-01

    This contribution discusses Paracelsism-influenced early-modern alchemy. There are notably two forms of analogy, each hierarchically arranged: a vertically ordered analogy ("as above, thus below") in which Nature is situated as mediator between God and man, and a horizontally ordered analogy ("as without, thus within") in which Nature's magic is regarded as a model for man, particularly expressed in the metaphor of "Vulcan" (smith) and doctor (e.g., Nature as inner healer). In alchemy the conventional "healing power of Nature" is pin-pointed: The doctor (as alchemist, magician) must unravel Nature's secrets and emulate her magic to perfect her work -particularly medicine production. Diagrams and historical depictions illustrate this.

  2. Inviting Argument by Analogy: Analogical-Mapping-Based Comparison Activities as a Scaffold for Small-Group Argumentation

    ERIC Educational Resources Information Center

    Emig, Brandon R.; McDonald, Scott; Zembal-Saul, Carla; Strauss, Susan G.

    2014-01-01

    This study invited small groups to make several arguments by analogy about simple machines. Groups were first provided training on analogical (structure) mapping and were then invited to use analogical mapping as a scaffold to make arguments. In making these arguments, groups were asked to consider three simple machines: two machines that they had…

  3. Accounting for Water Insecurity in Modeling Domestic Water Demand

    NASA Astrophysics Data System (ADS)

    Galaitsis, S. E.; Huber-lee, A. T.; Vogel, R. M.; Naumova, E.

    2013-12-01

    Water demand management uses price elasticity estimates to predict consumer demand in relation to water pricing changes, but studies have shown that many additional factors effect water consumption. Development scholars document the need for water security, however, much of the water security literature focuses on broad policies which can influence water demand. Previous domestic water demand studies have not considered how water security can affect a population's consumption behavior. This study is the first to model the influence of water insecurity on water demand. A subjective indicator scale measuring water insecurity among consumers in the Palestinian West Bank is developed and included as a variable to explore how perceptions of control, or lack thereof, impact consumption behavior and resulting estimates of price elasticity. A multivariate regression model demonstrates the significance of a water insecurity variable for data sets encompassing disparate water access. When accounting for insecurity, the R-squaed value improves and the marginal price a household is willing to pay becomes a significant predictor for the household quantity consumption. The model denotes that, with all other variables held equal, a household will buy more water when the users are more water insecure. Though the reasons behind this trend require further study, the findings suggest broad policy implications by demonstrating that water distribution practices in scarcity conditions can promote consumer welfare and efficient water use.

  4. Challenges in Using Analogies

    ERIC Educational Resources Information Center

    Lin, Shih-Yin; Singh, Chandralekha

    2011-01-01

    Learning physics requires understanding the applicability of fundamental principles in a variety of contexts that share deep features. One way to help students learn physics is via analogical reasoning. Students can be taught to make an analogy between situations that are more familiar or easier to understand and another situation where the same…

  5. The Effect of Contrasting Analogies on Understanding of and Reasoning about Natural Selection

    ERIC Educational Resources Information Center

    Sota, Melinda

    2012-01-01

    Analogies play significant roles in communication as well as in problem solving and model building in science domains. Analogies have also been incorporated into several different instructional strategies--most notably in science domains where the concepts and principles to be learned are abstract or complex. Although several instructional models…

  6. Spectroscopy and reactivity of mineral analogs of the Martian soil

    NASA Technical Reports Server (NTRS)

    Banin, A.; Orenberg, J.; Roush, T.

    1991-01-01

    To answer the question of why life occurred on Earth but not on Mars requires a study of the geochemical and physical aspects of the Martian soil. Some of the best Mars analog mineral models of the soil have been prepared and justified according to known constraints of chemical composition, reflectance spectroscopy, and chemical reactivity. Detailed laboratory reflectance spectra in the ultraviolet, visible, and near infrared (.30 to 2.5 microns) and the infrared (2.5 to 25 microns) regions have been obtained for the pure candidate minerals and some analog mixtures and compared to Mars reflectance spectra. Modeling of the reflectance spectra from optical constraints determined for the analog minerals has begun and will be interpreted in terms of the effects of particle size variation, component mixing, and soil packing upon remotely sensed reflectance spectra. This has implications not only for Mars, but for other planets and planetoids. The ratio of Fe(II)/Fe(III) in the Martian soil analog materials on spectral reflectance in the visible range has begun, and the results will be evaluated according to conformity with the visible Mars reflectance spectrum. Some initial LR and GEX data have been collected for the mineral samples and their mixtures, which can be compared with the Viking data and interpreted in terms of the redox (Fe(II)/Fe(III) environment.

  7. Working memory predicts children's analogical reasoning.

    PubMed

    Simms, Nina K; Frausel, Rebecca R; Richland, Lindsey E

    2018-02-01

    Analogical reasoning is the cognitive skill of drawing relationships between representations, often between prior knowledge and new representations, that allows for bootstrapping cognitive and language development. Analogical reasoning proficiency develops substantially during childhood, although the mechanisms underlying this development have been debated, with developing cognitive resources as one proposed mechanism. We explored the role of executive function (EF) in supporting children's analogical reasoning development, with the goal of determining whether predicted aspects of EF were related to analogical development at the level of individual differences. We assessed 5- to 11-year-old children's working memory, inhibitory control, and cognitive flexibility using measures from the National Institutes of Health Toolbox Cognition battery. Individual differences in children's working memory best predicted performance on an analogical mapping task, even when controlling for age, suggesting a fundamental interrelationship between analogical reasoning and working memory development. These findings underscore the need to consider cognitive capacities in comprehensive theories of children's reasoning development. Copyright © 2017 Elsevier Inc. All rights reserved.

  8. Optical analog-to-digital converter

    DOEpatents

    Vawter, G Allen [Corrales, NM; Raring, James [Goleta, CA; Skogen, Erik J [Albuquerque, NM

    2009-07-21

    An optical analog-to-digital converter (ADC) is disclosed which converts an input optical analog signal to an output optical digital signal at a sampling rate defined by a sampling optical signal. Each bit of the digital representation is separately determined using an optical waveguide interferometer and an optical thresholding element. The interferometer uses the optical analog signal and the sampling optical signal to generate a sinusoidally-varying output signal using cross-phase-modulation (XPM) or a photocurrent generated from the optical analog signal. The sinusoidally-varying output signal is then digitized by the thresholding element, which includes a saturable absorber or at least one semiconductor optical amplifier, to form the optical digital signal which can be output either in parallel or serially.

  9. NOAA's National Water Model - Integration of National Water Model with Geospatial Data creating Water Intelligence

    NASA Astrophysics Data System (ADS)

    Clark, E. P.; Cosgrove, B.; Salas, F.

    2016-12-01

    As a significant step forward to transform NOAA's water prediction services, NOAA plans to implement a new National Water Model (NWM) Version 1.0 in August 2016. A continental scale water resources model, the NWM is an evolution of the WRF-Hydro architecture developed by the National Center for Atmospheric Research (NCAR). The NWM will provide analyses and forecasts of flow for the 2.7 million stream reaches nationwide in the National Hydrography Dataset Plus v2 (NHDPlusV2) jointly developed by the USGS and EPA. The NWM also produces high-resolution water budget variables of snow, soil moisture, and evapotranspiration on a 1-km grid. NOAA's stakeholders require additional decision support application to be built on these data. The Geo-intelligence division of the Office of Water Prediction is building new products and services that integrate output from the NWM with geospatial datasets such as infrastructure and demographics to better estimate the impacts dynamic water resource states on community resiliency. This presentation will detail the methods and underlying information to produce prototypes water resources intelligence that is timely, actionable and credible. Moreover, it will to explore the NWM capability to support sector-specific decision support services.

  10. A C-terminal Aldehyde Analog of the Insect Kinins Inhibits Diuresis in the Housefly

    DTIC Science & Technology

    2006-09-21

    p e p t i d e s 2 8 ( 2 0 0 7 ) 1 4 6 – 1 5 2A C-terminal aldehyde analog of the insect kinins inhibits diuresis in the housefly Ronald J. Nachman a...secretion in crickets, but shows inhibition of both in vitro and in vivo diuresis in the housefly . R-LK-CHO reduced the total amount of urine voided over 3 h...from flies injected with 1 mL of distilled water by almost 50%. The analog not only inhibits stimulation of housefly fluid secretion by the native

  11. In Pursuit of Analogs for Europa's Dynamics & Potential Habitats

    NASA Astrophysics Data System (ADS)

    Schmidt, Britney E.; Blankenship, D. D.; Greenbaum, J. S.; Young, D. A.

    2010-10-01

    Future Europa exploration will seek to characterize the distribution of shallow subsurface water as well as to understand the formation of surface features through dynamic ice-shell processes. Radar sounding will be a critical tool for imaging these features, and should be of primary interest to the astrobiology community for understanding how and where life might arise on Europa. To develop successful instrumentation and data interpretation techniques for exploring Europa, we must leverage analogous terrestrial environments and processes. Airborne ice penetrating radar is now a mature tool in terrestrial studies of Earth's ice sheets, and orbital examples have been successfully deployed at Earth's Moon and Mars. It is a distinct possibility that water within or just below the ice on Europa has played a role in forming some of its dynamic terrain. Observations of rotated blocks and dark floor materials may suggest that brines existed in the near subsurface and enabled the formation of such features. The University of Texas High Capability Airborne Radar Sounder (HiCARS) developed to study Antarctic ice sheet dynamics has been configured to test observation scenarios for Europa. We discuss recent results from the 60 MHz HiCARS system over brine infiltrated Antarctic marine ice as an analog for processes affecting the formation of pits and chaos. Basal melt occurring below terrestrial marine ice is directly analogous to processes that may operate on Europa if the shell is "thin,” and will be similar to processes occurring instead within the ice sheet in the case of a thicker, multi-layer ice sheet where enriched brines may remain liquid within the shell. A key site for further investigation of conductive and "convective” ices is found in the polythermal glaciers in the Arctic, and the case for this exploration will be illuminated.

  12. Morphometry of Left Frontal and Temporal Poles Predicts Analogical Reasoning Abilities.

    PubMed

    Aichelburg, Clarisse; Urbanski, Marika; Thiebaut de Schotten, Michel; Humbert, Frederic; Levy, Richard; Volle, Emmanuelle

    2016-03-01

    Analogical reasoning is critical for making inferences and adapting to novelty. It can be studied experimentally using tasks that require creating similarities between situations or concepts, i.e., when their constituent elements share a similar organization or structure. Brain correlates of analogical reasoning have mostly been explored using functional imaging that has highlighted the involvement of the left rostrolateral prefrontal cortex (rlPFC) in healthy subjects. However, whether inter-individual variability in analogical reasoning ability in a healthy adult population is related to differences in brain architecture is unknown. We investigated this question by employing linear regression models of performance in analogy tasks and voxel-based morphometry in 54 healthy subjects. Our results revealed that the ability to reason by analogy was associated with structural variability in the left rlPFC and the anterior part of the inferolateral temporal cortex. Tractography of diffusion-weighted images suggested that these 2 regions have a different set of connections but may exchange information via the arcuate fasciculus. These results suggest that enhanced integrative and semantic abilities supported by structural variation in these areas (or their connectivity) may lead to more efficient analogical reasoning. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

  13. Evaporation pathways and solubility of Fe-Ca-Mg-rich salts in acid sulfate waters. A model for Martian ancient surface waters

    NASA Astrophysics Data System (ADS)

    Sobron, P.; Sansano, A.; Sanz, A.

    2011-12-01

    It has been suggested that Martian iron rich sulfate and oxyhydroxide deposits were precipitated from meltwaters[1], thought to have been acidic. Alternatively, iron(III)-rich hydrated sulfates from oxidized sulfides observed in the outcrops may occur as a result of long-term reactions[4]. Recent analysis of Martian materials support that they come from hydrothermal activity[5], which is highly consistent with the observation of enriched in iron, magnesium, silicon and calcium materials[2]. Independently of the nature of the sulfate formation paths on Mars, characterizing the interaction of saline mineral assemblages and the aqueous solutions necessary for their formation is significance in assessing Mars' hydrological and mineralogical evolution history. In this work we have characterized a layered deposit(Fig. 1) formed from the evaporation of stream water from Rio Tinto, Spain, a relevant Mars analog site[6]. The minerals detected in-situ, confirmed later via high resolution laser Raman spectroscopy in the laboratory, are, from bottom to top: (A) mixture of goethite and probably schwermannite; (B) goethite; (C) mixture of gypsum and highly hydrated ferric sulfates; (D) hexahydrite; and (E) mixture of hexahydrite and epsomite. What we observed in this deposit is the precipitation of relatively insoluble hydroxysulfates (schwermannite admixed with goethite), followed by the precipitation of other relatively insoluble ferric and gypsum, and finally the occurrence of the very soluble Mg-sulfates. We are currently investigating the correlation of this evaporite deposit with the hydrochemistry of the stream water from which it evaporated through dedicated laboratory analysis of natural mineral and aqueous samples. A solubility model including the minerals identified in this work will be reported at the conference. The study of this particular acid sulfate system (with analog mineralogy to that observed in Meridiani[3]) provides constraints on the evaporation pathways

  14. Is the Link from Working Memory to Analogy Causal? No Analogy Improvements following Working Memory Training Gains

    PubMed Central

    Richey, J. Elizabeth; Phillips, Jeffrey S.; Schunn, Christian D.; Schneider, Walter

    2014-01-01

    Analogical reasoning has been hypothesized to critically depend upon working memory through correlational data [1], but less work has tested this relationship through experimental manipulation [2]. An opportunity for examining the connection between working memory and analogical reasoning has emerged from the growing, although somewhat controversial, body of literature suggests complex working memory training can sometimes lead to working memory improvements that transfer to novel working memory tasks. This study investigated whether working memory improvements, if replicated, would increase analogical reasoning ability. We assessed participants’ performance on verbal and visual analogy tasks after a complex working memory training program incorporating verbal and spatial tasks [3], [4]. Participants’ improvements on the working memory training tasks transferred to other short-term and working memory tasks, supporting the possibility of broad effects of working memory training. However, we found no effects on analogical reasoning. We propose several possible explanations for the lack of an impact of working memory improvements on analogical reasoning. PMID:25188356

  15. Development of Ensemble Model Based Water Demand Forecasting Model

    NASA Astrophysics Data System (ADS)

    Kwon, Hyun-Han; So, Byung-Jin; Kim, Seong-Hyeon; Kim, Byung-Seop

    2014-05-01

    In recent years, Smart Water Grid (SWG) concept has globally emerged over the last decade and also gained significant recognition in South Korea. Especially, there has been growing interest in water demand forecast and optimal pump operation and this has led to various studies regarding energy saving and improvement of water supply reliability. Existing water demand forecasting models are categorized into two groups in view of modeling and predicting their behavior in time series. One is to consider embedded patterns such as seasonality, periodicity and trends, and the other one is an autoregressive model that is using short memory Markovian processes (Emmanuel et al., 2012). The main disadvantage of the abovementioned model is that there is a limit to predictability of water demands of about sub-daily scale because the system is nonlinear. In this regard, this study aims to develop a nonlinear ensemble model for hourly water demand forecasting which allow us to estimate uncertainties across different model classes. The proposed model is consist of two parts. One is a multi-model scheme that is based on combination of independent prediction model. The other one is a cross validation scheme named Bagging approach introduced by Brieman (1996) to derive weighting factors corresponding to individual models. Individual forecasting models that used in this study are linear regression analysis model, polynomial regression, multivariate adaptive regression splines(MARS), SVM(support vector machine). The concepts are demonstrated through application to observed from water plant at several locations in the South Korea. Keywords: water demand, non-linear model, the ensemble forecasting model, uncertainty. Acknowledgements This subject is supported by Korea Ministry of Environment as "Projects for Developing Eco-Innovation Technologies (GT-11-G-02-001-6)

  16. GSFLOW - Coupled Ground-Water and Surface-Water Flow Model Based on the Integration of the Precipitation-Runoff Modeling System (PRMS) and the Modular Ground-Water Flow Model (MODFLOW-2005)

    USGS Publications Warehouse

    Markstrom, Steven L.; Niswonger, Richard G.; Regan, R. Steven; Prudic, David E.; Barlow, Paul M.

    2008-01-01

    The need to assess the effects of variability in climate, biota, geology, and human activities on water availability and flow requires the development of models that couple two or more components of the hydrologic cycle. An integrated hydrologic model called GSFLOW (Ground-water and Surface-water FLOW) was developed to simulate coupled ground-water and surface-water resources. The new model is based on the integration of the U.S. Geological Survey Precipitation-Runoff Modeling System (PRMS) and the U.S. Geological Survey Modular Ground-Water Flow Model (MODFLOW). Additional model components were developed, and existing components were modified, to facilitate integration of the models. Methods were developed to route flow among the PRMS Hydrologic Response Units (HRUs) and between the HRUs and the MODFLOW finite-difference cells. This report describes the organization, concepts, design, and mathematical formulation of all GSFLOW model components. An important aspect of the integrated model design is its ability to conserve water mass and to provide comprehensive water budgets for a location of interest. This report includes descriptions of how water budgets are calculated for the integrated model and for individual model components. GSFLOW provides a robust modeling system for simulating flow through the hydrologic cycle, while allowing for future enhancements to incorporate other simulation techniques.

  17. Indentation tectonics in northern Taiwan: insights from field observations and analog models

    NASA Astrophysics Data System (ADS)

    Lu, Chia-Yu; Lee, Jian-Cheng; Malavieille, Jacques

    2017-04-01

    In northern Taiwan, contraction, extension, transcurrent shearing, and block rotation are four major tectonic deformation mechanisms involved in the progressive deformation of this arcuate mountain belt. The recent evolution of the orogen is controlled not only by the oblique convergence between the Eurasian plate and the Philippine Sea plate but also by the corner shape of the plate boundary. Based on field observations, analyses, geophysical data (mostly GPS) and results of experimental models, we interpret the curved shape of northern Taiwan as a result of contractional deformation (involving imbricate thrusting and folding, backthrusting and backfolding). The subsequent horizontal and vertical extrusion, combined with increasing transcurrent & rotational deformation (bookshelf-type strike-slip faulting and block rotation) induced transcurrent/ rotational extrusion and extrusion related extensional deformation. A special type of extrusional folds characterizes that complex deformation regime. The tectonics in northern Taiwan reflects a single, regional pattern of deformation. The crescent-shaped mountain belt develops in response to oblique indentation by an asymmetric wedge indenter, retreat of Ryukyu trench and opening of the Okinawa trough. Three sets of analog sandbox models are presented to illustrate the development of tectonic structures and their kinematic evolution

  18. Integrated water resources modelling for assessing sustainable water governance

    NASA Astrophysics Data System (ADS)

    Skoulikaris, Charalampos; Ganoulis, Jacques; Tsoukalas, Ioannis; Makropoulos, Christos; Gkatzogianni, Eleni; Michas, Spyros

    2015-04-01

    Climatic variations and resulting future uncertainties, increasing anthropogenic pressures, changes in political boundaries, ineffective or dysfunctional governance of natural resources and environmental degradation are some of the most fundamental challenges with which worldwide initiatives fostering the "think globally, act locally" concept are concerned. Different initiatives target the protection of the environment through sustainable development; Integrated Water Resources Management (IWRM) and Transboundary Water Resources Management (TWRM) in the case of internationally shared waters are frameworks that have gained wide political acceptance at international level and form part of water resources management planning and implementation on a global scale. Both concepts contribute in promoting economic efficiency, social equity and environmental sustainability. Inspired by these holistic management approaches, the present work describes an effort that uses integrated water resources modelling for the development of an integrated, coherent and flexible water governance tool. This work in which a sequence of computer based models and tools are linked together, aims at the evaluation of the sustainable operation of projects generating renewable energy from water as well as the sustainability of agricultural demands and environmental security in terms of environmental flow under various climatic and operational conditions. More specifically, catchment hydrological modelling is coupled with dams' simulation models and thereafter with models dedicated to water resources management and planning,while the bridging of models is conducted through geographic information systems and custom programming tools. For the case of Mesta/Nestos river basin different priority rules in the dams' operational schedule (e.g. priority given to power production as opposed to irrigation needs and vice versa), as well as different irrigation demands, e.g. current water demands as opposed to

  19. Integrating the simulation of domestic water demand behaviour to an urban water model using agent based modelling

    NASA Astrophysics Data System (ADS)

    Koutiva, Ifigeneia; Makropoulos, Christos

    2015-04-01

    The urban water system's sustainable evolution requires tools that can analyse and simulate the complete cycle including both physical and cultural environments. One of the main challenges, in this regard, is the design and development of tools that are able to simulate the society's water demand behaviour and the way policy measures affect it. The effects of these policy measures are a function of personal opinions that subsequently lead to the formation of people's attitudes. These attitudes will eventually form behaviours. This work presents the design of an ABM tool for addressing the social dimension of the urban water system. The created tool, called Urban Water Agents' Behaviour (UWAB) model, was implemented, using the NetLogo agent programming language. The main aim of the UWAB model is to capture the effects of policies and environmental pressures to water conservation behaviour of urban households. The model consists of agents representing urban households that are linked to each other creating a social network that influences the water conservation behaviour of its members. Household agents are influenced as well by policies and environmental pressures, such as drought. The UWAB model simulates behaviour resulting in the evolution of water conservation within an urban population. The final outcome of the model is the evolution of the distribution of different conservation levels (no, low, high) to the selected urban population. In addition, UWAB is implemented in combination with an existing urban water management simulation tool, the Urban Water Optioneering Tool (UWOT) in order to create a modelling platform aiming to facilitate an adaptive approach of water resources management. For the purposes of this proposed modelling platform, UWOT is used in a twofold manner: (1) to simulate domestic water demand evolution and (2) to simulate the response of the water system to the domestic water demand evolution. The main advantage of the UWAB - UWOT model

  20. Analogies: Explanatory Tools in Web-Based Science Instruction

    ERIC Educational Resources Information Center

    Glynn, Shawn M.; Taasoobshirazi, Gita; Fowler, Shawn

    2007-01-01

    This article helps designers of Web-based science instruction construct analogies that are as effective as those used in classrooms by exemplary science teachers. First, the authors explain what analogies are, how analogies foster learning, and what form analogies should take. Second, they discuss science teachers' use of analogies. Third, they…

  1. Coseismic and postseismic motion of a landslide: Observations, modeling, and analogy with tectonic faults

    NASA Astrophysics Data System (ADS)

    Lacroix, P.; Perfettini, H.; Taipe, E.; Guillier, B.

    2014-10-01

    We document the first time series of a landslide reactivation by an earthquake using continuous GPS measurements over the Maca landslide (Peru). Our survey shows a coseismic response of the landslide of about 2 cm, followed by a relaxation period of 5 weeks during which postseismic slip is 3 times greater than the coseismic displacement itself. Our results confirm the coseismic activation of landslides and provide the first observation of a postseismic displacement. These observations are consistent with a mechanical model where slip on the landslide basal interface is governed by rate and state friction, analogous to the mechanics of creeping tectonic faults, opening new perspectives to study the mechanics of landslides and active faults.

  2. NASA Cribs: Human Exploration Research Analog

    NASA Image and Video Library

    2017-07-20

    Follow along as interns at NASA’s Johnson Space Center show you around the Human Exploration Research Analog (HERA), a mission simulation environment located onsite at the Johnson Space Center in Houston. HERA is a unique three-story habitat designed to serve as an analog for isolation, confinement, and remote conditions in exploration scenarios. This video gives a tour of where crew members live, work, sleep, and eat during the analog missions. Find out more about HERA mission activities: https://www.nasa.gov/analogs/hera Find out how to be a HERA crew member: https://www.nasa.gov/analogs/hera/want-to-participate For more on NASA internships: https://intern.nasa.gov/ For Johnson Space Center specific internships: https://pathways.jsc.nasa.gov/ https://www.nasa.gov/centers/johnson/education/interns/index.html HD download link: https://archive.org/details/jsc2017m000730_NASA-Cribs-Human-Exploration-Research-Analog --------------------------------- FOLLOW JOHNSON SPACE CENTER INTERNS! Facebook: @NASA.JSC.Students https://www.facebook.com/NASA.JSC.Students/ Instagram: @nasajscstudents https://www.instagram.com/nasajscstudents/ Twitter: @NASAJSCStudents https://twitter.com/nasajscstudents

  3. A Proposed Model of Self-Generated Analogical Reasoning for the Concept of Translation in Protein Synthesis

    ERIC Educational Resources Information Center

    Salih, Maria

    2008-01-01

    This paper explored and described the analogical reasoning occurring in the minds of different science achievement groups for the concept of translation in protein synthesis. "What is the process of self-generated analogical reasoning?", "What types of matching was involved?" and "What are the consequences of the matching…

  4. FGF growth factor analogs

    DOEpatents

    Zamora, Paul O [Gaithersburg, MD; Pena, Louis A [Poquott, NY; Lin, Xinhua [Plainview, NY; Takahashi, Kazuyuki [Germantown, MD

    2012-07-24

    The present invention provides a fibroblast growth factor heparin-binding analog of the formula: ##STR00001## where R.sub.1, R.sub.2, R.sub.3, R.sub.4, R.sub.5, X, Y and Z are as defined, pharmaceutical compositions, coating compositions and medical devices including the fibroblast growth factor heparin-binding analog of the foregoing formula, and methods and uses thereof.

  5. D-piece modifications of the hemiasterlin analog HTI-286 produce potent tubulin inhibitors.

    PubMed

    Zask, Arie; Birnberg, Gary; Cheung, Katherine; Kaplan, Joshua; Niu, Chuan; Norton, Emily; Yamashita, Ayako; Beyer, Carl; Krishnamurthy, Girija; Greenberger, Lee M; Loganzo, Frank; Ayral-Kaloustian, Semiramis

    2004-08-16

    Modifications of the D-piece carboxylic acid group of the hemiasterlin analog HTI-286 gave tubulin inhibitors which were potent cytotoxic agents in taxol resistant cell lines expressing P-glycoprotein. Amides derived from proline had potency comparable to HTI-286. Reduction of the carboxylic acid to ketones and alcohols or its conversion to acidic heterocycles also gave potent analogs. Synthetic modifications of the carboxylic acid could be carried out selectively using a wide range of synthetic reagents. Proline analog 3 was found to be effective in a human xenograft model in athymic mice.

  6. New Model of Mapping Difficulties in Solving Analogical Problems among Adolescents and Adults with Intellectual Disability

    ERIC Educational Resources Information Center

    Lifshitz, Hefziba; Weiss, Itzhak; Tzuriel, David; Tzemach, Moran

    2011-01-01

    The main goal of the study was to map the difficulties and cognitive processes among adolescents (aged 13-21, N = 30) and adults (aged 25-66, N = 30) with mild and moderate intellectual disability (ID) when solving analogical problems. The participants were administered the "Conceptual and Perceptual Analogical Modifiability" test. A…

  7. Flocking from a quantum analogy: spin-orbit coupling in an active fluid

    NASA Astrophysics Data System (ADS)

    Loewe, Benjamin; Souslov, Anton; Goldbart, Paul M.

    2018-01-01

    Systems composed of strongly interacting self-propelled particles can form a spontaneously flowing polar active fluid. The study of the connection between the microscopic dynamics of a single such particle and the macroscopic dynamics of the fluid can yield insights into experimentally realizable active flows, but this connection is well understood in only a few select cases. We introduce a model of self-propelled particles based on an analogy with the motion of electrons that have strong spin-orbit coupling. We find that, within our model, self-propelled particles are subject to an analog of the Heisenberg uncertainty principle that relates translational and rotational noise. Furthermore, by coarse-graining this microscopic model, we establish expressions for the coefficients of the Toner-Tu equations—the hydrodynamic equations that describe an active fluid composed of these ‘active spins.’ The connection between stochastic self-propelled particles and quantum particles with spin may help realize exotic phases of matter using active fluids via analogies with systems composed of strongly correlated electrons.

  8. Fostering Multilateral Involvement in Analog Research

    NASA Technical Reports Server (NTRS)

    Cromwell, Ronita L.

    2015-01-01

    International collaboration in space flight research is an effective means for conducting investigations and utilizing limited resources to the fullest extent. Through these multilateral collaborations mutual research questions can be investigated and resources contributed by each international partner to maximize the scientific benefits to all parties. Recently the international partners embraced this approach to initiate collaborations in ground-based space flight analog environments. In 2011, the International Analog Research Working Group was established, and later named the International Human Space Flight Analog Research Coordination Group (HANA). Among the goals of this working group are to 1) establish a framework to coordinate research campaigns, as appropriate, to minimize duplication of effort and enhance synergy; 2) define what analogs are best to use for collaborative interests; and 3) facilitate interaction between discipline experts in order to have the full benefit of international expertise. To accomplish these goals, HANA is currently engaged in developing international research campaigns in ground-based analogs. Plans are being made for an international solicitation for proposals to address research of common interest to all international partners. This solicitation with identify an analog environment that will best accommodate the types of investigations requested. Once selected, studies will be integrated into a campaign and implemented at the analog site. Through these combined efforts, research beneficial to all partners will be conducted efficiently to further address human risks of space exploration.

  9. Curcumin analog cytotoxicity against breast cancer cells: exploitation of a redox-dependent mechanism.

    PubMed

    Sun, Aiming; Lu, Yang J; Hu, Haipeng; Shoji, Mamoru; Liotta, Dennis C; Snyder, James P

    2009-12-01

    A series of novel curcumin analogs, symmetrical dienones, were previously shown to possess cytotoxic, anti-angiogenic and anti-tumor activities. Analogs 1 (EF24) and 2 (EF31) share the dienone scaffold and serve as Michael acceptors. We propose that the anti-cancer effects of 1 and 2 are mediated in part by redox-mediated induction of apoptosis. In order to support this concept, 1 and 2 were treated with L-glutathione (GSH) and cysteine-containing dipeptides under mild conditions to form colorless water-soluble adducts, which were identified by LC/MS. Comparison of the cytotoxic action of 1, 2 and the corresponding conjugates, 1-(GSH)(2) and 2-(GSH)(2), illustrated that the two classes of compounds exhibit essentially identical cell killing capabilities. Compared with the yellow, somewhat light sensitive and nearly water insoluble compounds 1 and 2, the glutathione conjugates represent a promising new series of stable and soluble anti-tumor pro-drugs.

  10. Toward modular biological models: defining analog modules based on referent physiological mechanisms.

    PubMed

    Petersen, Brenden K; Ropella, Glen E P; Hunt, C Anthony

    2014-08-16

    Currently, most biomedical models exist in isolation. It is often difficult to reuse or integrate models or their components, in part because they are not modular. Modular components allow the modeler to think more deeply about the role of the model and to more completely address a modeling project's requirements. In particular, modularity facilitates component reuse and model integration for models with different use cases, including the ability to exchange modules during or between simulations. The heterogeneous nature of biology and vast range of wet-lab experimental platforms call for modular models designed to satisfy a variety of use cases. We argue that software analogs of biological mechanisms are reasonable candidates for modularization. Biomimetic software mechanisms comprised of physiomimetic mechanism modules offer benefits that are unique or especially important to multi-scale, biomedical modeling and simulation. We present a general, scientific method of modularizing mechanisms into reusable software components that we call physiomimetic mechanism modules (PMMs). PMMs utilize parametric containers that partition and expose state information into physiologically meaningful groupings. To demonstrate, we modularize four pharmacodynamic response mechanisms adapted from an in silico liver (ISL). We verified the modularization process by showing that drug clearance results from in silico experiments are identical before and after modularization. The modularized ISL achieves validation targets drawn from propranolol outflow profile data. In addition, an in silico hepatocyte culture (ISHC) is created. The ISHC uses the same PMMs and required no refactoring. The ISHC achieves validation targets drawn from propranolol intrinsic clearance data exhibiting considerable between-lab variability. The data used as validation targets for PMMs originate from both in vitro to in vivo experiments exhibiting large fold differences in time scale. This report demonstrates

  11. Postural Responses Following Space Flight and Ground Based Analogs

    NASA Technical Reports Server (NTRS)

    Kofman, Igor S.; Reschke, Millard F.; Cerisano, Jody M.; Fisher, Elizabeth A.; Tomilovskaya, Elena V.; Kozlovskaya, Inessa B.; Bloomberg, Jacob B.

    2013-01-01

    With the transition from the Shuttle program to the International Space Station (ISS), the opportunity to fly sensorimotor experiments in a weightless environment has become increasingly more difficult to obtain. As a result, more investigations have turned to ground-based analogs as a way of evaluating an experiment's viability. The two primary analogs available to most investigators are 6deg head down bed rest (HDBR) and dry immersion (DI). For the time being, HDBR investigations have been associated with studies conducted in the United States while the Russians and several other European Union states have concentrated their efforts on using DI as the space flight analog of choice. While either model may be viable for cardiovascular, bone and other system changes, vestibular and sensorimotor investigators have retained serious reservations of either analog's potential to serve as a replacement for a true weightless environment. These reservations have merit, but it is worthwhile to consider that not all changes associated with sensorimotor function during space flight are the result of top-down modifications, but may also be due to the lack, or change, of appropriate support surfaces applying force to the bottom of the feet. To this end we have compared quiet stance postural responses between short duration Space Shuttle flights, long duration ISS flights and HDBR of varying duration. Using these three platforms, representing different modifications of support we investigated postural ataxia using a quiet stance model. Quiet stance was obtained by asking the subjects to stand upright on a force plate, eyes open, arms at the side of the body for three min. From the force plate we obtained average sway velocity in two axes as well as length of line (stabilogram). These parameters were then related to EMG activity recorded from the medial gastrocnemius and lateral tibialis. It is significant to note that postural ataxia measured as quiet stance shows analogous

  12. Cryogenic Calcite: A Morphologic and Isotopic Analog to the ALH84001 Carbonates

    NASA Technical Reports Server (NTRS)

    Niles, P. B.; Leshin, L. A.; Socki, R. A.; Guan, Y.; Ming, D. W.; Gibson, E. K.

    2004-01-01

    Martian meteorite ALH84001 carbonates preserve large and variable microscale isotopic compositions, which in some way reflect their formation environment. These measurements show large variations (>20%) in the carbon and oxygen isotopic compositions of the carbonates on a 10-20 micron scale that are correlated with chemical composition. However, the utilization of these data sets for interpreting the formation conditions of the carbonates is complex due to lack of suitable terrestrial analogs and the difficulty of modeling under non-equilibrium conditions. Thus, the mechanisms and processes are largely unknown that create and preserve large microscale isotopic variations in carbonate minerals. Experimental tests of the possible environments and mechanisms that lead to large microscale isotopic variations can help address these concerns. One possible mechanism for creating large carbon isotopic variations in carbonates involves the freezing of water. Carbonates precipitate during extensive CO2 degassing that occurs during the freezing process as the fluid s decreasing volume drives CO2 out. This rapid CO2 degassing results in a kinetic isotopic fractionation where the CO2 gas has a much lighter isotopic composition causing an enrichment of 13C in the remaining dissolved bicarbonate. This study seeks to determine the suitability of cryogenically formed carbonates as analogs to ALH84001 carbonates. Specifically, our objective is to determine how accurately models using equilibrium fractionation factors approximate the isotopic compositions of cryogenically precipitated carbonates. This includes determining the accuracy of applying equilibrium fractionation factors during a kinetic process, and determining how isotopic variations in the fluid are preserved in microscale variations in the precipitated carbonates.

  13. Passive Electroreception in Fish: AN Analog Model of the Spike Generation Zone.

    NASA Astrophysics Data System (ADS)

    Harvey, James Robert

    Sensory transduction begins in receptor cells specialized to the sensory modality involved and proceeds to the more generalized stage of the first afferent fiber, converting the initial sensory information into neural spikes for transmittal to the central nervous system. We have developed a unique analog electronic model of the generalized step (also known as the spike generation zone (SGZ)) using a tunnel diode, an operational amplifier, resistors, and capacitors. With no externally applied simulated postsynaptic input current, our model represents a 10^{-3}cm^2 patch (100 times the typical in vivo area) of tonically active, nonadaptive, postsynaptic neural membrane that behaves as a pacemaker cell. Similar to the FitzHugh-Nagumo equations, our model is shown to be a simplification of the Hodgkin-Huxley parallel conductance model and can be analyzed by the methods of van der Pol. Measurements using the model yield results which compare favorably to physiological stimulus-response data gathered by Murray for elasmobranch electroreceptors. We then use the model to show that the main contribution to variance in the rate of neural spike output is provided by coincident inputs to the SGZ oscillator (i.e., by synaptic input noise) and not by inherent instability of the SGZ oscillator. Configured for maximum sensitivity, our model is capable of detecting stimulus changes as low as 50 fA in less than a second and this corresponds to a fractional frequency change of Delta f/f ~ 2 times 10^{-3}. Much data exists implying that in vivo detection of Delta f/f is limited to the range of one to ten percent (Weber-Fechner criterion). We propose the variance induced by the synaptic input noise provides a plausible physiological basis for the Weber-Fechner criterion.

  14. Generalized DSS shell for developing simulation and optimization hydro-economic models of complex water resources systems

    NASA Astrophysics Data System (ADS)

    Pulido-Velazquez, Manuel; Lopez-Nicolas, Antonio; Harou, Julien J.; Andreu, Joaquin

    2013-04-01

    Hydrologic-economic models allow integrated analysis of water supply, demand and infrastructure management at the river basin scale. These models simultaneously analyze engineering, hydrology and economic aspects of water resources management. Two new tools have been designed to develop models within this approach: a simulation tool (SIM_GAMS), for models in which water is allocated each month based on supply priorities to competing uses and system operating rules, and an optimization tool (OPT_GAMS), in which water resources are allocated optimally following economic criteria. The characterization of the water resource network system requires a connectivity matrix representing the topology of the elements, generated using HydroPlatform. HydroPlatform, an open-source software platform for network (node-link) models, allows to store, display and export all information needed to characterize the system. Two generic non-linear models have been programmed in GAMS to use the inputs from HydroPlatform in simulation and optimization models. The simulation model allocates water resources on a monthly basis, according to different targets (demands, storage, environmental flows, hydropower production, etc.), priorities and other system operating rules (such as reservoir operating rules). The optimization model's objective function is designed so that the system meets operational targets (ranked according to priorities) each month while following system operating rules. This function is analogous to the one used in the simulation module of the DSS AQUATOOL. Each element of the system has its own contribution to the objective function through unit cost coefficients that preserve the relative priority rank and the system operating rules. The model incorporates groundwater and stream-aquifer interaction (allowing conjunctive use simulation) with a wide range of modeling options, from lumped and analytical approaches to parameter-distributed models (eigenvalue approach). Such

  15. Photometric properties of Mars soils analogs

    USGS Publications Warehouse

    Pommerol, A.; Thomas, N.; Jost, B.; Beck, P.; Okubo, C.; McEwen, A.S.

    2013-01-01

    We have measured the bidirectional reflectance of analogs of dry, wet, and frozen Martian soils over a wide range of phase angles in the visible spectral range. All samples were produced from two geologic samples: the standard JSC Mars-1 soil simulant and Hawaiian basaltic sand. In a first step, experiments were conducted with the dry samples to investigate the effects of surface texture. Comparisons with results independently obtained by different teams with similar samples showed a satisfying reproducibility of the photometric measurements as well as a noticeable influence of surface textures resulting from different sample preparation procedures. In a second step, water was introduced to produce wet and frozen samples and their photometry investigated. Optical microscope images of the samples provided information about their microtexture. Liquid water, even in relatively low amount, resulted in the disappearance of the backscattering peak and the appearance of a forward-scattering peak whose intensity increases with the amount of water. Specular reflections only appeared when water was present in an amount large enough to allow water to form a film at the surface of the sample. Icy samples showed a wide variability of photometric properties depending on the physical properties of the water ice. We discuss the implications of these measurements in terms of the expected photometric behavior of the Martian surface, from equatorial to circum-polar regions. In particular, we propose some simple photometric criteria to improve the identification of wet and/or icy soils from multiple observations under different geometries.

  16. Not All Analogies Are Created Equal: Associative and Categorical Analogy Processing following Brain Damage

    ERIC Educational Resources Information Center

    Schmidt, Gwenda L.; Cardillo, Eileen R.; Kranjec, Alexander; Lehet, Matthew; Widick, Page; Chatterjee, Anjan

    2012-01-01

    Current research on analogy processing assumes that different conceptual relations are treated similarly. However, just as words and concepts are related in distinct ways, different kinds of analogies may employ distinct types of relationships. An important distinction in how words are related is the difference between associative (dog-bone) and…

  17. Higher-Order Hamiltonian Model for Unidirectional Water Waves

    NASA Astrophysics Data System (ADS)

    Bona, J. L.; Carvajal, X.; Panthee, M.; Scialom, M.

    2018-04-01

    Formally second-order correct, mathematical descriptions of long-crested water waves propagating mainly in one direction are derived. These equations are analogous to the first-order approximations of KdV- or BBM-type. The advantage of these more complex equations is that their solutions corresponding to physically relevant initial perturbations of the rest state may be accurate on a much longer timescale. The initial value problem for the class of equations that emerges from our derivation is then considered. A local well-posedness theory is straightforwardly established by a contraction mapping argument. A subclass of these equations possess a special Hamiltonian structure that implies the local theory can be continued indefinitely.

  18. Three-dimensional modeling of n+-nu-n+ and p+-pi-p+ semiconducting devices for analog ULSI microelectronics

    NASA Astrophysics Data System (ADS)

    Gillet, Jean-Numa; Degorce, Jean-Yves; Belisle, Jonathan; Meunier, Michel

    2004-03-01

    Three-dimensional modeling of n^+-ν -n^+ and p^+-π -p^+ semiconducting devices for analog ULSI microelectronics Jean-Numa Gillet,^a,b Jean-Yves Degorce,^a Jonathan Bélisle^a and Michel Meunier.^a,c ^a École Polytechnique de Montréal, Dept. of Engineering Physics, CP 6079, Succ. Centre-vile, Montréal, Québec H3C 3A7, Canada. ^b Corresponding author. Email: Jean-Numa.Gillet@polymtl.ca ^c Also with LTRIM Technologies, 140-440, boul. A.-Frappier, Laval, Québec H7V 4B4, Canada. We present for the first time three-dimensional (3-D) modeling of n^+-ν -n^+ and p^+-π -p^+ semiconducting resistors, which are fabricated by laser-induced doping in a gateless MOSFET and present significant applications for analog ULSI microelectronics. Our modeling software is made up of three steps. The two first concerns modeling of a new laser-trimming fabrication process. With the molten-silicon temperature distribution obtained from the first, we compute in the second the 3-D dopant distribution, which creates the electrical link through the device gap. In this paper the emphasis is on the third step, which concerns 3-D modeling of the resistor electronic behavior with a new tube multiplexing algorithm (TMA). The device current-voltage (I-V) curve is usually obtained by solving three coupled partial differential equations with a finite-element method. A 3-D device as our resistor cannot be modeled with this classical method owing to its prohibitive computational cost in three dimensions. This problem is however avoided by our TMA, which divides the 3-D device into one-dimensional (1-D) multiplexed tubes. In our TMA 1-D systems of three ordinary differential equations are solved to determine the 3-D device I-V curve, which substantially increases computation speed compared with the classical method. Numerical results show a good agreement with experiments.

  19. Enhancing programming logic thinking using analogy mapping

    NASA Astrophysics Data System (ADS)

    Sukamto, R. A.; Megasari, R.

    2018-05-01

    Programming logic thinking is the most important competence for computer science students. However, programming is one of the difficult subject in computer science program. This paper reports our work about enhancing students' programming logic thinking using Analogy Mapping for basic programming subject. Analogy Mapping is a computer application which converts source code into analogies images. This research used time series evaluation and the result showed that Analogy Mapping can enhance students' programming logic thinking.

  20. Urban-Water Harmony model to evaluate the urban water management.

    PubMed

    Ding, Yifan; Tang, Deshan; Wei, Yuhang; Yin, Sun

    2014-01-01

    Water resources in many urban areas are under enormous stress due to large-scale urban expansion and population explosion. The decision-makers are often faced with the dilemma of either maintaining high economic growth or protecting water resources and the environment. Simple criteria of water supply and drainage do not reflect the requirement of integrated urban water management. The Urban-Water Harmony (UWH) model is based on the concept of harmony and offers a more integrated approach to urban water management. This model calculates four dimensions, namely urban development, urban water services, water-society coordination, and water environment coordination. And the Analytic Hierarchy Process has been used to determine the indices weights. We applied the UWH model to Beijing, China for an 11-year assessment. Our findings show that, despite the severe stress inherent in rapid development and water shortage, the urban water relationship of Beijing is generally evolving in a positive way. The social-economic factors such as the water recycling technologies contribute a lot to this change. The UWH evaluation can provide a reasonable analysis approach to combine various urban and water indices to produce an integrated and comparable evaluation index. This, in turn, enables more effective water management in decision-making processes.

  1. Gemini analogs of vitamin D.

    PubMed

    Pazos, Gonzalo; Rivadulla, Marcos L; Pérez-García, Xenxo; Gandara, Zoila; Pérez, Manuel

    2014-01-01

    The Gemini analogs are the last significant contribution to the family of vitamin D derivatives in medicine, for the treatment of cancer. The first Gemini analog was characterized by two symmetric side chains at C-20. Following numerous modifications, the most active analog bears a C-23-triple bond, C-26, 27- hexafluoro substituents on one side chain and a terminal trideuteromethylhydroxy group on the other side chain. This progression was possible due to improvements in the synthetic methods for the preparation of these derivatives, which allowed for increasing molecular complexity and complete diastereoselective control at C-20 and the substituted sidechains.

  2. Education and Public Outreach and Engagement at NASA's Analog Missions in 2012

    NASA Technical Reports Server (NTRS)

    Watkins, Wendy L.; Janoiko, Barbara A.; Mahoney, Erin; Hermann, Nicole B.

    2013-01-01

    Analog missions are integrated, multi-disciplinary activities that test key features of future human space exploration missions in an integrated fashion to gain a deeper understanding of system-level interactions and operations early in conceptual development. These tests often are conducted in remote and extreme environments that are representative in one or more ways to that of future spaceflight destinations. They may also be conducted at NASA facilities, using advanced modeling and human-in-the-loop scenarios. As NASA develops a capability driven framework to transport crew to a variety of space environments, it will use analog missions to gather requirements and develop the technologies necessary to ensure successful exploration beyond low Earth orbit. NASA s Advanced Exploration Systems (AES) Division conducts these high-fidelity integrated tests, including the coordination and execution of a robust education and public outreach (EPO) and engagement program for each mission. Conducting these mission scenarios in unique environments not only provides an opportunity to test the EPO concepts for the particular future-mission scenario, such as the best methods for conducting events with a communication time delay, but it also provides an avenue to deliver NASA s human space exploration key messages. These analogs are extremely exciting to students and the public, and they are performed in such a way that the public can feel like part of the mission. They also provide an opportunity for crew members to obtain training in education and public outreach activities similar to what they would perform in space. The analog EPO team is responsible for the coordination and execution of the events, the overall social media component for each mission, and public affairs events such as media visits and interviews. They also create new and exciting ways to engage the public, manage and create website content, coordinate video footage for missions, and coordinate and integrate

  3. Comparison of Nootropic and Neuroprotective Features of Aryl-Substituted Analogs of Gamma-Aminobutyric Acid.

    PubMed

    Tyurenkov, I N; Borodkina, L E; Bagmetova, V V; Berestovitskaya, V M; Vasil'eva, O S

    2016-02-01

    GABA analogs containing phenyl (phenibut) or para-chlorophenyl (baclofen) substituents demonstrated nootropic activity in a dose of 20 mg/kg: they improved passive avoidance conditioning, decelerated its natural extinction, and exerted antiamnestic effect on the models of amnesia provoked by scopolamine or electroshock. Tolyl-containing GABA analog (tolibut, 20 mg/kg) exhibited antiamnestic activity only on the model of electroshock-induced amnesia. Baclofen and, to a lesser extent, tolibut alleviated seizures provoked by electroshock, i.e. both agents exerted anticonvulsant effect. All examined GABA aryl derivatives demonstrated neuroprotective properties on the maximum electroshock model: they shortened the duration of coma and shortened the period of spontaneous motor activity recovery. In addition, these agents decreased the severity of passive avoidance amnesia and behavioral deficit in the open field test in rats exposed to electroshock. The greatest neuroprotective properties were exhibited by phenyl-containing GABA analog phenibut.

  4. Multiple Analogies for Complex Concepts: Antidotes for Analogy-Induced Misconception in Advanced Knowledge Acquisition. Technical Report No. 439.

    ERIC Educational Resources Information Center

    Spiro, Rand J.; And Others

    This report argues that there exists a pervasive tendency for analogies to contribute to the development of entrenched misconceptions in the form of reducing complex new knowledge to the core of a source analogy. The report presents a taxonomy of ways that simple analogy induces conceptual error and an alternative approach involving integrated…

  5. Predictions of the physicochemical properties of amino acid side chain analogs using molecular simulation.

    PubMed

    Ahmed, Alauddin; Sandler, Stanley I

    2016-03-07

    A candidate drug compound is released for clinical trails (in vivo activity) only if its physicochemical properties meet desirable bioavailability and partitioning criteria. Amino acid side chain analogs play vital role in the functionalities of protein and peptides and as such are important in drug discovery. We demonstrate here that the predictions of solvation free energies in water, in 1-octanol, and self-solvation free energies computed using force field-based expanded ensemble molecular dynamics simulation provide good accuracy compared to existing empirical and semi-empirical methods. These solvation free energies are then, as shown here, used for the prediction of a wide range of physicochemical properties important in the assessment of bioavailability and partitioning of compounds. In particular, we consider here the vapor pressure, the solubility in both water and 1-octanol, and the air-water, air-octanol, and octanol-water partition coefficients of amino acid side chain analogs computed from the solvation free energies. The calculated solvation free energies using different force fields are compared against each other and with available experimental data. The protocol here can also be used for a newly designed drug and other molecules where force field parameters and charges are obtained from density functional theory.

  6. Modeling Wave Driven Non-linear Flow Oscillations: The Terrestrial QBO and a Solar Analog

    NASA Technical Reports Server (NTRS)

    Mayr, Hans G.; Bhartia, P. K. (Technical Monitor)

    2001-01-01

    The Quasi Biennial Oscillation (QBO) of the zonal circulation observed in the terrestrial atmosphere at low latitudes is driven by wave mean flow interaction as was demonstrated first by Lindzen and Holton (1968), shown in a laboratory experiment by Plumb and McEwan (1978), and modeled by others (e.g., Plumb, Dunkerton). Although influenced by the seasonal cycle of solar forcing, the QBO, in principle, represents a nonlinear flow oscillation that can be maintained by a steady source of upward propagating waves. The wave driven non-linearity is of third or odd order in the flow velocity, which regenerates the fundamental harmonic itself to keep the oscillation going - the fluid dynamical analog of the displacement mechanism in the mechanical clock. Applying Hines' Doppler Spread Parameterization (DSP) for gravity waves (GW), we discuss with a global-scale spectral model numerical experiments that elucidate some properties of the QBO and its possible effects on the climatology of the atmosphere. Depending on the period of the QBO, wave filtering can cause interaction with the seasonal variations to produce pronounced oscillations with beat periods around 10 years. Since the seasonal cycle and its variability influence the period of the QBO, it may also be a potent conduit of solar activity variations to lower altitudes. Analogous to the terrestrial QBO, we propose that a flow oscillation may account for the 22-year periodicity of the solar magnetic cycle, potentially answering Dicke (1978) who asked, "Is there a chronometer hidden deep inside the Sun?" The oscillation would occur below the convection region, where gravity waves can propagate. Employing a simplified, analytic model, Hines' DSP is applied to estimate the flow oscillation. Depending on the adopted horizontal wavelengths of GW's, wave amplitudes less than 10 m/s can be made to produce oscillating zonal flows of about 20 m/s that should be large enough to generate a significant oscillation in the magnetic

  7. The Effect of Analogy-Based Teaching on Students' Achievement and Students' Views about Analogies

    ERIC Educational Resources Information Center

    Genc, Murat

    2013-01-01

    The purpose of this study is to determine the effect of the analogy-based teaching on students' achievement and students' views about analogies. In this research, Solomon group design which is one of the experimental designs, was implemented. The sample of the research consists of 108 students in four 6th grade classes in Turkey. The achievement…

  8. Antibacterial and Antibiofilm Activities of Makaluvamine Analogs

    PubMed Central

    Nijampatnam, Bhavitavya; Nadkarni, Dwayaja H.; Wu, Hui; Velu, Sadanandan E.

    2014-01-01

    Streptococcus mutans is a key etiological agent in the formation of dental caries. The major virulence factor is its ability to form biofilms. Inhibition of S. mutans biofilms offers therapeutic prospects for the treatment and the prevention of dental caries. In this study, 14 analogs of makaluvamine, a marine alkaloid, were evaluated for their antibacterial activity against S. mutans and for their ability to inhibit S. mutans biofilm formation. All analogs contained the tricyclic pyrroloiminoquinone core of makaluvamines. The structural variations of the analogs are on the amino substituents at the 7-position of the ring and the inclusion of a tosyl group on the pyrrole ring N of the makaluvamine core. The makaluvamine analogs displayed biofilm inhibition with IC50 values ranging from 0.4 μM to 88 μM. Further, the observed bactericidal activity of the majority of the analogs was found to be consistent with the anti-biofilm activity, leading to the conclusion that the anti-biofilm activity of these analogs stems from their ability to kill S. mutans. However, three of the most potent N-tosyl analogs showed biofilm IC50 values at least an order of magnitude lower than that of bactericidal activity, indicating that the biofilm activity of these analogs is more selective and perhaps independent of bactericidal activity. PMID:25767719

  9. Mud volcanoes of trinidad as astrobiological analogs for martian environments.

    PubMed

    Hosein, Riad; Haque, Shirin; Beckles, Denise M

    2014-10-13

    Eleven onshore mud volcanoes in the southern region of Trinidad have been studied as analog habitats for possible microbial life on Mars. The profiles of the 11 mud volcanoes are presented in terms of their physical, chemical, mineralogical, and soil properties. The mud volcanoes sampled all emitted methane gas consistently at 3% volume. The average pH for the mud volcanic soil was 7.98. The average Cation Exchange Capacity (CEC) was found to be 2.16 kg/mol, and the average Percentage Water Content was 34.5%. Samples from three of the volcanoes, (i) Digity; (ii) Piparo and (iii) Devil's Woodyard were used to culture bacterial colonies under anaerobic conditions indicating possible presence of methanogenic microorganisms. The Trinidad mud volcanoes can serve as analogs for the Martian environment due to similar geological features found extensively on Mars in Acidalia Planitia and the Arabia Terra region.

  10. Mud Volcanoes of Trinidad as Astrobiological Analogs for Martian Environments

    PubMed Central

    Hosein, Riad; Haque, Shirin; Beckles, Denise M.

    2014-01-01

    Eleven onshore mud volcanoes in the southern region of Trinidad have been studied as analog habitats for possible microbial life on Mars. The profiles of the 11 mud volcanoes are presented in terms of their physical, chemical, mineralogical, and soil properties. The mud volcanoes sampled all emitted methane gas consistently at 3% volume. The average pH for the mud volcanic soil was 7.98. The average Cation Exchange Capacity (CEC) was found to be 2.16 kg/mol, and the average Percentage Water Content was 34.5%. Samples from three of the volcanoes, (i) Digity; (ii) Piparo and (iii) Devil’s Woodyard were used to culture bacterial colonies under anaerobic conditions indicating possible presence of methanogenic microorganisms. The Trinidad mud volcanoes can serve as analogs for the Martian environment due to similar geological features found extensively on Mars in Acidalia Planitia and the Arabia Terra region. PMID:25370529

  11. CI-WATER HPC Model: Cyberinfrastructure to Advance High Performance Water Resources Modeling in the Intermountain Western U.S

    NASA Astrophysics Data System (ADS)

    Ogden, F. L.; Lai, W.; Douglas, C. C.; Miller, S. N.; Zhang, Y.

    2012-12-01

    The CI-WATER project is a cooperative effort between the Utah and Wyoming EPSCoR jurisdictions, and is funded through a cooperative agreement with the U.S. National Science Foundation EPSCoR. The CI-WATER project is acquiring hardware and developing software cyberinfrastructure (CI) to enhance accessibility of High Performance Computing for water resources modeling in the Western U.S. One of the components of the project is development of a large-scale, high-resolution, physically-based, data-driven, integrated computational water resources model, which we call the CI-WATER HPC model. The objective of this model development is to enable evaluation of integrated system behavior to guide and support water system planning and management by individual users, cities, or states. The model is first being tested in the Green River basin of Wyoming, which is the largest tributary to the Colorado River. The model will ultimately be applied to simulate the entire Upper Colorado River basin for hydrological studies, watershed management, economic analysis, as well as evaluation of potential changes in environmental policy and law, population, land use, and climate. In addition to hydrologically important processes simulated in many hydrological models, the CI-WATER HPC model will emphasize anthropogenic influences such as land use change, water resources infrastructure, irrigation practices, trans-basin diversions, and urban/suburban development. The model operates on an unstructured mesh, employing adaptive mesh at grid sizes as small as 10 m as needed- particularly in high elevation snow melt regions. Data for the model are derived from remote sensing sources, atmospheric models and geophysical techniques. Monte-Carlo techniques and ensemble Kalman filtering methodologies are employed for data assimilation. The model includes application programming interface (API) standards to allow easy substitution of alternative process-level simulation routines, and provide post

  12. An Analysis Model for Water Cone Subsidence in Bottom Water Drive Reservoirs

    NASA Astrophysics Data System (ADS)

    Wang, Jianjun; Xu, Hui; Wu, Shucheng; Yang, Chao; Kong, lingxiao; Zeng, Baoquan; Xu, Haixia; Qu, Tailai

    2017-12-01

    Water coning in bottom water drive reservoirs, which will result in earlier water breakthrough, rapid increase in water cut and low recovery level, has drawn tremendous attention in petroleum engineering field. As one simple and effective method to inhibit bottom water coning, shut-in coning control is usually preferred in oilfield to control the water cone and furthermore to enhance economic performance. However, most of the water coning researchers just have been done on investigation of the coning behavior as it grows up, the reported studies for water cone subsidence are very scarce. The goal of this work is to present an analytical model for water cone subsidence to analyze the subsidence of water cone when the well shut in. Based on Dupuit critical oil production rate formula, an analytical model is developed to estimate the initial water cone shape at the point of critical drawdown. Then, with the initial water cone shape equation, we propose an analysis model for water cone subsidence in bottom water reservoir reservoirs. Model analysis and several sensitivity studies are conducted. This work presents accurate and fast analytical model to perform the water cone subsidence in bottom water drive reservoirs. To consider the recent interests in development of bottom drive reservoirs, our approach provides a promising technique for better understanding the subsidence of water cone.

  13. Subduction initiation and Obduction: insights from analog models

    NASA Astrophysics Data System (ADS)

    Agard, P.; Zuo, X.; Funiciello, F.; Bellahsen, N.; Faccenna, C.; Savva, D.

    2013-12-01

    Subduction initiation and obduction are two poorly constrained geodynamic processes which are interrelated in a number of natural settings. Subduction initiation can be viewed as the result of a regional-scale change in plate convergence partitioning between the set of existing subduction (and collision or obduction) zones worldwide. Intraoceanic subduction initiation may also ultimately lead to obduction of dense oceanic "ophiolites" atop light continental plates. A classic example is the short-lived Peri-Arabic obduction, which took place along thousands of km almost synchronously (within ~5-10 myr), from Turkey to Oman, while the subduction zone beneath Eurasia became temporarily jammed. We herein present analog models designed to study both processes and more specifically (1) subduction initiation through the partitioning of deformation between two convergent zones (a preexisting and a potential one) and, as a consequence, (2) the possible development of obduction, which has so far never been modeled. These models explore the mechanisms of subduction initiation and obduction and test various triggering hypotheses (i.e., plate acceleration, slab crossing the 660 km discontinuity, ridge subduction; Agard et al., 2007). The experimental setup comprises an upper mantle modelled as a low-viscosity transparent Newtonian glucose syrup filling a rigid Plexiglas tank and high-viscosity silicone plates. Convergence is simulated by pushing on a piston at one end of the model with plate tectonics like velocities (1-10 cm/yr) onto (i) a continental margin, (ii) a weakness zone with variable resistance and dip (W), (iii) an oceanic plate - with or without a spreading ridge, (iv) a subduction zone (S) dipping away from the piston and (v) an upper active continental margin, below which the oceanic plate is being subducted at the start of the experiment (as for the Oman case). Several configurations were tested over thirty-five parametric experiments. Special emphasis was

  14. Groundwater model of the Blue River basin, Nebraska-Twenty years later

    USGS Publications Warehouse

    Alley, W.M.; Emery, P.A.

    1986-01-01

    Groundwater flow models have become almost a routine tool of the practicing hydrologist. Yet, surprisingly little attention has been given to true verification analysis of studies using these models. This paper examines predictions for 1982 of water-level declines and streamflow depletions that were made in 1965 using an electric analog groundwater model of the Blue River basin in southeastern Nebraska. Analysis of the model's predictions suggests that the analog model used too low an estimate of net groundwater withdrawals, yet overestimated water-level declines. The model predicted that almost all of the net groundwater pumpage would come from storage in the Pleistocene aquifer within the Blue River basin. It appears likely that the model underestimated the contributions of other sources of water to the pumpage, and that the aquifer storage coefficients used in the model were too low. There is some evidence that groundwater pumpage has had a greater than predicted effect on streamflow. Considerable uncertainty about the basic conceptualization of the hydrology of the Blue River basin greatly limits the reliability of groundwater models developed for the basin. The paper concludes with general perspectives on groundwater modeling gained from this post-audit analysis. ?? 1986.

  15. A Systematic Evaluation of Analogs and Automated Read ...

    EPA Pesticide Factsheets

    Read-across is a data gap filling technique widely used within category and analog approaches to predict a biological property for a data-poor (target) chemical using known information from similar (source analog) chemical(s). Potential source analogs are typically identified based on structural similarity. Although much guidance has been published for read-across, practical principles for the identification and evaluation of the scientific validity of source analogs remains lacking. This case study explores how well 3 structure descriptor sets (Pubchem, Chemotyper and MoSS) are able to identify analogs for read-across and predict Estrogen Receptor (ER) binding activity for a specific class of chemicals: hindered phenols. For each target chemical, analogs were selected using each descriptor set with two cut-offs: (1) Minimum Tanimoto similarity (range 0.1 - 0.9), and (2) Closest N analogs (range 1 - 10). Each target-analog pair was then evaluated for its agreement with measured ER binding and agonism. The analogs were subsequently filtered using: (1) physchem properties (LogKow & Molecular Volume), and (2) number of literature sources as a marker for the quality of the experimental data. A majority vote prediction was made for each target phenol by reading-across from the closest N analogs. The data set comprised 462 hindered phenols and 257 non-hindered phenols. The results demonstrate that: (1) The concordance in ER activity rises with increasing similarity,

  16. Matrix-addressed analog ferroelectric memory

    NASA Astrophysics Data System (ADS)

    Lemons, R. A.; Grogan, J. K.; Thompson, J. S.

    1980-08-01

    A matrix addressed analog memory which uses multiple ferroelectric domain walls to address columns of words, is demonstrated. It is shown that the analog information is stored as a pattern in the metallization on the surface of the crystal, making a read-only memory. The pattern is done photolithographically in a way compatible with the simultaneous fabrication of many devices. Attention is given to the performance results, noting that the advantage of the device is that analog information can be stored with a high density in a single mask step. Finally, it is shown that potential applications are in systems which require repetitive output from a limited vocabulary of spoken words.

  17. Conjecturing via Reconceived Classical Analogy

    ERIC Educational Resources Information Center

    Lee, Kyeong-Hwa; Sriraman, Bharath

    2011-01-01

    Analogical reasoning is believed to be an efficient means of problem solving and construction of knowledge during the search for and the analysis of new mathematical objects. However, there is growing concern that despite everyday usage, learners are unable to transfer analogical reasoning to learning situations. This study aims at facilitating…

  18. Diverse amide analogs of sulindac for cancer treatment and prevention.

    PubMed

    Mathew, Bini; Hobrath, Judith V; Connelly, Michele C; Kiplin Guy, R; Reynolds, Robert C

    2017-10-15

    Sulindac is a non-steroidal anti-inflammatory drug (NSAID) that has shown significant anticancer activity. Sulindac sulfide amide (1) possessing greatly reduced COX-related inhibition relative to sulindac displayed in vivo antitumor activity that was comparable to sulindac in a human colon tumor xenograft model. Inspired by these observations, a panel of diverse sulindac amide derivatives have been synthesized and their activity probed against three cancer cell lines (prostate, colon and breast). A neutral analog, compound 79 was identified with comparable potency relative to lead 1 and activity against a panel of lymphoblastic leukemia cell lines. Several new series also show good activity relative to the parent (1), including five analogs that also possess nanomolar inhibitory potencies against acute lymphoblastic leukemia cells. Several new analogs identified may serve as anticancer lead candidates for further development. Copyright © 2017 The Author(s). Published by Elsevier Ltd.. All rights reserved.

  19. Optical domain analog to digital conversion methods and apparatus

    DOEpatents

    Vawter, Gregory A

    2014-05-13

    Methods and apparatus for optical analog to digital conversion are disclosed. An optical signal is converted by mapping the optical analog signal onto a wavelength modulated optical beam, passing the mapped beam through interferometers to generate analog bit representation signals, and converting the analog bit representation signals into an optical digital signal. A photodiode receives an optical analog signal, a wavelength modulated laser coupled to the photodiode maps the optical analog signal to a wavelength modulated optical beam, interferometers produce an analog bit representation signal from the mapped wavelength modulated optical beam, and sample and threshold circuits corresponding to the interferometers produce a digital bit signal from the analog bit representation signal.

  20. High resolution multi-facies realizations of sedimentary reservoir and aquifer analogs

    PubMed Central

    Bayer, Peter; Comunian, Alessandro; Höyng, Dominik; Mariethoz, Gregoire

    2015-01-01

    Geological structures are by nature inaccessible to direct observation. This can cause difficulties in applications where a spatially explicit representation of such structures is required, in particular when modelling fluid migration in geological formations. An increasing trend in recent years has been to use analogs to palliate this lack of knowledge, i.e., exploiting the spatial information from sites where the geology is accessible (outcrops, quarry sites) and transferring the observed properties to a study site deemed geologically similar. While this approach is appealing, it is difficult to put in place because of the lack of access to well-documented analog data. In this paper we present comprehensive analog data sets which characterize sedimentary structures from important groundwater hosting formations in Germany and Brazil. Multiple 2-D outcrop faces are described in terms of hydraulic, thermal and chemical properties and interpolated in 3-D using stochastic techniques. These unique data sets can be used by the wider community to implement analog approaches for characterizing reservoir and aquifer formations. PMID:26175910

  1. Playing with a double-edged sword: Analogies in biochemistry

    NASA Astrophysics Data System (ADS)

    Orgill, Marykay

    Analogy pervades our everyday reasoning. No situation we encounter is exactly like a situation we have encountered previously, and our ability to learn and survive in the world is based on our ability to find similarities between past and present situations and use the knowledge we have gained from past situations to manage current situations. Analogies can be powerful teaching tools because they can make new material intelligible to students by comparing it to material that is already familiar. It is clear, though, that not all analogies are good and that not all good analogies are useful to all students. In this study, I have used textbook analysis, classroom observations, student interviews and instructor interviews to determine the role that analogies play in biochemistry learning. Analogies are an important teaching technique in biochemistry classes, being used more often in both biochemistry classes and textbooks than they are in high school chemistry classes and textbooks. Most biochemistry students like, pay particular attention to, and remember the analogies their instructors provide; and they use these analogies to understand, visualize, and recall information from class. Even though students like and use analogies, they do not understand what analogies are or the mechanism by which they improve learning. For the students, analogies are simply any teaching technique that eases understanding, visualization, or recall. Instructors, on the other hand, have a good understanding of what analogies are and of how they should be presented in class; but they do not use analogies as effectively as they should. They do not plan, explain or identify the limitations of the analogies they use in class. However, regardless of how effectively instructors present analogies in class, this study indicates that, in general, analogies are useful in promoting understanding, visualization, recall, and motivation in biochemistry students at all levels. They would be even more

  2. A Review of Surface Water Quality Models

    PubMed Central

    Li, Shibei; Jia, Peng; Qi, Changjun; Ding, Feng

    2013-01-01

    Surface water quality models can be useful tools to simulate and predict the levels, distributions, and risks of chemical pollutants in a given water body. The modeling results from these models under different pollution scenarios are very important components of environmental impact assessment and can provide a basis and technique support for environmental management agencies to make right decisions. Whether the model results are right or not can impact the reasonability and scientificity of the authorized construct projects and the availability of pollution control measures. We reviewed the development of surface water quality models at three stages and analyzed the suitability, precisions, and methods among different models. Standardization of water quality models can help environmental management agencies guarantee the consistency in application of water quality models for regulatory purposes. We concluded the status of standardization of these models in developed countries and put forward available measures for the standardization of these surface water quality models, especially in developing countries. PMID:23853533

  3. The Pennies-as-Electrons Analogy

    ERIC Educational Resources Information Center

    Ashmann, Scott

    2009-01-01

    Everyday experiences familiarize students with the ways in which electricity is used, but often the underlying concepts remain a mystery. Teachers often use analogies to help students relate the flow of electrons to other common systems, but many times these analogies are incomplete and lead to more student misconceptions. However, the "pass the…

  4. FUNDAMENTALS OF GROUND-WATER MODELING

    EPA Science Inventory

    Ground-water flow and contaminant transport modeling has been used at many hazardous waste sites with varying degrees of success. odels may be used throughout all phases of the site investigation and remediation processes. eveloping a better understanding of ground-water modeling...

  5. The cognitive nexus between Bohr's analogy for the atom and Pauli's exclusion schema.

    PubMed

    Ulazia, Alain

    2016-03-01

    The correspondence principle is the primary tool Bohr used to guide his contributions to quantum theory. By examining the cognitive features of the correspondence principle and comparing it with those of Pauli's exclusion principle, I will show that it did more than simply 'save the phenomena'. The correspondence principle in fact rested on powerful analogies and mental schemas. Pauli's rejection of model-based methods in favor of a phenomenological, rule-based approach was therefore not as disruptive as some historians have indicated. Even at a stage that seems purely phenomenological, historical studies of theoretical development should take into account non-formal, model-based approaches in the form of mental schemas, analogies and images. In fact, Bohr's images and analogies had non-classical components which were able to evoke the idea of exclusion as a prohibition law and as a preliminary mental schema. Copyright © 2016 Elsevier Ltd. All rights reserved.

  6. Impacts of Past Land Use Changes on Water Resources: An Analog for Assessing Effects of Proposed Bioenergy Crops

    NASA Astrophysics Data System (ADS)

    Scanlon, B. R.; Schilling, K.; Young, M.; Duncan, I. J.; Gerbens-Leenes, P.

    2011-12-01

    Interest is increasing in renewable energy sources, including bioenergy. However, potential impacts of bioenergy crops on water resources need to be better understood before large scale expansion occurs. This study evaluates the potential for using past land use change impacts on water resources as an analog for assessing future bioenergy crop effects. Impacts were assessed for two cases and methods: (1) changes from perennial to annual crops in the Midwest U.S. using stream hydrograph separation; and (2) changes from perennial grasses and shrubs to annual crops in the Southwest U.S. using unsaturated zone and groundwater data. Results from the Midwest show that expanding the soybean production area by 80,000 km2 increased stream flow by 32%, based on data from Keokuk station in the Upper Mississippi River Basin. Using these relationships, further expansion of annual corn production for biofuels by 10 - 50% would increase streamflow by up to 40%, with related increases in nitrate, phosphate, and sediment pollutant transport to the Gulf of Mexico. The changes in water partitioning are attributed to reducing evapotranspiration, increasing recharge and baseflow discharge to streams. Similar results were found in the southwestern US, where changes from native perennial grasses and shrubs to annual crops increased recharge from ~0.0 to 24 mm/yr, raising water tables by up to 7 m in some regions and flushing accumulated salts into underlying aquifers in the southern High Plains. The changes in water partitioning are related to changes in rooting depth from deep rooted native vegetation to shallow rooted crops and growing season length. Further expansion of annual bioenergy crops, such as changes from Conservation Reserve Program to corn in the Midwest, will continue the trajectory of reducing ET, thereby increasing recharge and baseflow to streams and nutrient export. We hypothesize that changing bioenergy crops from annual crops to perennial grasses, such as switchgrass

  7. The Analog Atomic Force Microscope: Measuring, Modeling, and Graphing for Middle School

    ERIC Educational Resources Information Center

    Goss, Valerie; Brandt, Sharon; Lieberman, Marya

    2013-01-01

    using an analog atomic force microscope (A-AFM) made from a cardboard box and mailing tubes. Varying numbers of ping pong balls inside the tubes mimic atoms on a surface. Students use a dowel to make macroscale measurements similar to those of a nanoscale AFM tip as it…

  8. Mechatronics by Analogy and Application to Legged Locomotion

    NASA Astrophysics Data System (ADS)

    Ragusila, Victor

    A new design methodology for mechatronic systems, dubbed as Mechatronics by Analogy (MbA), is introduced and applied to designing a leg mechanism. The new methodology argues that by establishing a similarity relation between a complex system and a number of simpler models it is possible to design the former using the analysis and synthesis means developed for the latter. The methodology provides a framework for concurrent engineering of complex systems while maintaining the transparency of the system behaviour through making formal analogies between the system and those with more tractable dynamics. The application of the MbA methodology to the design of a monopod robot leg, called the Linkage Leg, is also studied. A series of simulations show that the dynamic behaviour of the Linkage Leg is similar to that of a combination of a double pendulum and a spring-loaded inverted pendulum, based on which the system kinematic, dynamic, and control parameters can be designed concurrently. The first stage of Mechatronics by Analogy is a method of extracting significant features of system dynamics through simpler models. The goal is to determine a set of simpler mechanisms with similar dynamic behaviour to that of the original system in various phases of its motion. A modular bond-graph representation of the system is determined, and subsequently simplified using two simplification algorithms. The first algorithm determines the relevant dynamic elements of the system for each phase of motion, and the second algorithm finds the simple mechanism described by the remaining dynamic elements. In addition to greatly simplifying the controller for the system, using simpler mechanisms with similar behaviour provides a greater insight into the dynamics of the system. This is seen in the second stage of the new methodology, which concurrently optimizes the simpler mechanisms together with a control system based on their dynamics. Once the optimal configuration of the simpler system is

  9. Toward modular biological models: defining analog modules based on referent physiological mechanisms

    PubMed Central

    2014-01-01

    Background Currently, most biomedical models exist in isolation. It is often difficult to reuse or integrate models or their components, in part because they are not modular. Modular components allow the modeler to think more deeply about the role of the model and to more completely address a modeling project’s requirements. In particular, modularity facilitates component reuse and model integration for models with different use cases, including the ability to exchange modules during or between simulations. The heterogeneous nature of biology and vast range of wet-lab experimental platforms call for modular models designed to satisfy a variety of use cases. We argue that software analogs of biological mechanisms are reasonable candidates for modularization. Biomimetic software mechanisms comprised of physiomimetic mechanism modules offer benefits that are unique or especially important to multi-scale, biomedical modeling and simulation. Results We present a general, scientific method of modularizing mechanisms into reusable software components that we call physiomimetic mechanism modules (PMMs). PMMs utilize parametric containers that partition and expose state information into physiologically meaningful groupings. To demonstrate, we modularize four pharmacodynamic response mechanisms adapted from an in silico liver (ISL). We verified the modularization process by showing that drug clearance results from in silico experiments are identical before and after modularization. The modularized ISL achieves validation targets drawn from propranolol outflow profile data. In addition, an in silico hepatocyte culture (ISHC) is created. The ISHC uses the same PMMs and required no refactoring. The ISHC achieves validation targets drawn from propranolol intrinsic clearance data exhibiting considerable between-lab variability. The data used as validation targets for PMMs originate from both in vitro to in vivo experiments exhibiting large fold differences in time scale

  10. Integrated Water Resources Simulation Model for Rural Community

    NASA Astrophysics Data System (ADS)

    Li, Y.-H.; Liao, W.-T.; Tung, C.-P.

    2012-04-01

    The purpose of this study is to develop several water resources simulation models for residence houses, constructed wetlands and farms and then integrate these models for a rural community. Domestic and irrigation water uses are the major water demand in rural community. To build up a model estimating domestic water demand for residence houses, the average water use per person per day should be accounted first, including water uses of kitchen, bathroom, toilet and laundry. On the other hand, rice is the major crop in the study region, and its productive efficiency sometimes depends on the quantity of irrigation water. The water demand can be estimated by crop water use, field leakage and water distribution loss. Irrigation water comes from rainfall, water supply system and reclaimed water which treated by constructed wetland. In recent years, constructed wetlands play an important role in water resources recycle. They can purify domestic wastewater for water recycling and reuse. After treating from constructed wetlands, the reclaimed water can be reused in washing toilets, watering gardens and irrigating farms. Constructed wetland is one of highly economic benefits for treating wastewater through imitating the processing mechanism of natural wetlands. In general, the treatment efficiency of constructed wetlands is determined by evapotranspiration, inflow, and water temperature. This study uses system dynamics modeling to develop models for different water resource components in a rural community. Furthermore, these models are integrated into a whole system. The model not only is utilized to simulate how water moves through different components, including residence houses, constructed wetlands and farms, but also evaluates the efficiency of water use. By analyzing the flow of water, the water resource simulation model can optimizes water resource distribution under different scenarios, and the result can provide suggestions for designing water resource system of a

  11. Analysis of head-down tilt as an analog of weightlessness using a methematical simulation model

    NASA Technical Reports Server (NTRS)

    Leonard, J. I.

    1984-01-01

    Antiorthostasis or head down tilt of a moderate degree was used as a ground based analog of weightless space flight to study headward fluid shifts, decreased plasma volume, orthostatic intolerance and muscular skeletal degradation. A mathematical model was used to help interpret these observations. The model proved most valuable for these studies was originally developed as a description of the major circulatory, fluid and electrolyte control systems. Two different experimental studies are employed to validate the model. The first is a 24 hour head down tilt study and the second is a 7 day head down bed rest study. The major issues addressed include the reduction in plasma volume, the dynamic changes of venous pressure and cardiac output, the extent of central hypervolemia during long term zero g exposure, the existence of an early diuresis, the mechanisms which alter the renal regulating hormones during the short term and long term periods, the significance of potassium loss on other zero g responses, and the role of transcapillary filtration in adjusting fluid shifts. The use of mathematical models as an interpretive and analysis technique for experimental research for space life science is illustrated.

  12. Lunar and Planetary Science XXXV: Mars: Remote Sensing and Terrestrial Analogs

    NASA Technical Reports Server (NTRS)

    2004-01-01

    The session "Mars: Remote Sensing and Terrestrial Analogs" included the following:Physical Meaning of the Hapke Parameter for Macroscopic Roughness: Experimental Determination for Planetary Regolith Surface Analogs and Numerical Approach; Near-Infrared Spectra of Martian Pyroxene Separates: First Results from Mars Spectroscopy Consortium; Anomalous Spectra of High-Ca Pyroxenes: Correlation Between Ir and M ssbauer Patterns; THEMIS-IR Emissivity Spectrum of a Large Dark Streak near Olympus Mons; Geomorphologic/Thermophysical Mapping of the Athabasca Region, Mars, Using THEMIS Infrared Imaging; Mars Thermal Inertia from THEMIS Data; Multispectral Analysis Methods for Mapping Aqueous Mineral Depostis in Proposed Paleolake Basins on Mars Using THEMIS Data; Joint Analysis of Mars Odyssey THEMIS Visible and Infrared Images: A Magic Airbrush for Qualitative and Quantitative Morphology; Analysis of Mars Thermal Emission Spectrometer Data Using Large Mineral Reference Libraries ; Negative Abundance : A Problem in Compositional Modeling of Hyperspectral Images; Mars-LAB: First Remote Sensing Data of Mineralogy Exposed at Small Mars-Analog Craters, Nevada Test Site; A Tool for the 2003 Rover Mini-TES: Downwelling Radiance Compensation Using Integrated Line-Sight Sky Measurements; Learning About Mars Geology Using Thermal Infrared Spectral Imaging: Orbiter and Rover Perspectives; Classifying Terrestrial Volcanic Alteration Processes and Defining Alteration Processes they Represent on Mars; Cemented Volcanic Soils, Martian Spectra and Implications for the Martian Climate; Palagonitic Mars: A Basalt Centric View of Surface Composition and Aqueous Alteration; Combining a Non Linear Unmixing Model and the Tetracorder Algorithm: Application to the ISM Dataset; Spectral Reflectance Properties of Some Basaltic Weathering Products; Morphometric LIDAR Analysis of Amboy Crater, California: Application to MOLA Analysis of Analog Features on Mars; Airborne Radar Study of Soil Moisture at

  13. Water balance model for Kings Creek

    NASA Technical Reports Server (NTRS)

    Wood, Eric F.

    1990-01-01

    Particular attention is given to the spatial variability that affects the representation of water balance at the catchment scale in the context of macroscale water-balance modeling. Remotely sensed data are employed for parameterization, and the resulting model is developed so that subgrid spatial variability is preserved and therefore influences the grid-scale fluxes of the model. The model permits the quantitative evaluation of the surface-atmospheric interactions related to the large-scale hydrologic water balance.

  14. A two-dimensional (2D) analytical subthreshold swing and transconductance model of underlap dual-material double-gate (DMDG) MOSFET for analog/RF applications

    NASA Astrophysics Data System (ADS)

    Narendar, Vadthiya; Rai, Saurabh; Tiwari, Siddharth; Mishra, R. A.

    2016-12-01

    The double-gate (DG) metal-oxide-semiconductor field effect transistors (MOSFETs) are the choice of technology in sub -100 nm regime of leading microelectronics industry. To enhance the analog and RF performance of DG MOSFET, an underlap dual-material (DM) DG MOSFET device structure has been considered because, it has the advantages of both underlap as well as that of dual-material gate (DMG). A 2D analytical surface potential, subthreshold current, subthreshold swing as well as transconductance modelling of underlap DMDG MOSFET has been done by solving the Poisson's equation. It has also been found that, numerically simulated data approves the analytically modelled data with commendable accuracy. As underlap length (Lun) increases, a substantial reduction of subthreshold current due to enhanced gate control over channel regime is observed. DMG structure facilitates to improve the average velocity of carriers which leads to superior drive current of the device. The underlap DMDG MOSFET device structure demonstrates an ameliorated subthreshold characteristic. The analog figure of merits (FOMs) such as transconductance (gm), transconductance generation factor (TGF), output conductance (gd), early voltage (VEA), intrinsic gain (AV) and RF FOMs namely cut-off frequency (fT), gain frequency product (GFP), transconductance frequency product (TFP) and gain transconductance frequency product (GTFP) have been evaluated. The aforesaid analysis revels that, the device is best suited for communication related Analog/RF applications.

  15. Novel anticancer polymeric conjugates of activated nucleoside analogs

    PubMed Central

    Senanayake, Thulani H.; Warren, Galya; Vinogradov, Serguei V.

    2011-01-01

    lymphoma (RL7/G) cells as compared to free drugs. In the initial in vivo screening, both PC-3 and RL7/G subcutaneous tumor xenograft models showed enhanced sensitivity to sustained drug release from polymeric FdU-conjugate after peritumoral injections and significant tumor growth inhibition. All these data demonstrate a remarkable clinical potential of novel polymeric conjugates of phosphorylated nucleoside analogs, especially as new therapeutic agents against drug-resistant tumors. PMID:21863885

  16. Modeling water demand when households have multiple sources of water

    NASA Astrophysics Data System (ADS)

    Coulibaly, Lassina; Jakus, Paul M.; Keith, John E.

    2014-07-01

    A significant portion of the world's population lives in areas where public water delivery systems are unreliable and/or deliver poor quality water. In response, people have developed important alternatives to publicly supplied water. To date, most water demand research has been based on single-equation models for a single source of water, with very few studies that have examined water demand from two sources of water (where all nonpublic system water sources have been aggregated into a single demand). This modeling approach leads to two outcomes. First, the demand models do not capture the full range of alternatives, so the true economic relationship among the alternatives is obscured. Second, and more seriously, economic theory predicts that demand for a good becomes more price-elastic as the number of close substitutes increases. If researchers artificially limit the number of alternatives studied to something less than the true number, the price elasticity estimate may be biased downward. This paper examines water demand in a region with near universal access to piped water, but where system reliability and quality is such that many alternative sources of water exist. In extending the demand analysis to four sources of water, we are able to (i) demonstrate why households choose the water sources they do, (ii) provide a richer description of the demand relationships among sources, and (iii) calculate own-price elasticity estimates that are more elastic than those generally found in the literature.

  17. Imaging and modelling root water uptake

    NASA Astrophysics Data System (ADS)

    Zarebanadkouki, M.; Meunier, F.; Javaux, M.; Kaestner, A.; Carminati, A.

    2017-12-01

    Spatially resolved measurement and modelling of root water uptake is urgently needed to identify root traits that can improve capture of water from the soil. However, measuring water fluxes into roots of transpiring plants growing in soil remains challenging. Here, we describe an in-situ technique to measure local fluxes of water into roots. The technique consists of tracing the transport of deuterated water (D2O) in soil and roots using time series neutron radiography and tomography. A diffusion-convection model was used to model the transport of D2O in roots. The model includes root features such as the endodermis, xylem and the composite flow of water in the apoplastic and symplastic pathways. Diffusion permeability of root cells and of the endodermis were estimated by fitting the experiment during the night, when transpiration was negligible. The water fluxes at different position of the root system were obtained by fitting the experiments at daytime. The results showed that root water uptake was not uniform along root system and varied among different root types. The measured profiles of root water uptake into roots were used to estimate the radial and axial hydraulic of the roots. A three-dimensional model of root water uptake was used to fit the measured water fluxes by adjusting the root radial and axial hydraulic conductivities. We found that the estimated radial conductivities decreased with root age, while the axial conducances increased, and they are different among root types. The significance of this study is the development of a method to estimate 1) water uptake and 2) the radial and axial hydraulic conductivities of roots of transpiring plants growing in the soil.

  18. Producing and Recognizing Analogical Relations

    ERIC Educational Resources Information Center

    Lipkens, Regina; Hayes, Steven C.

    2009-01-01

    Analogical reasoning is an important component of intelligent behavior, and a key test of any approach to human language and cognition. Only a limited amount of empirical work has been conducted from a behavior analytic point of view, most of that within Relational Frame Theory (RFT), which views analogy as a matter of deriving relations among…

  19. Targeting thyroid diseases with TSH receptor analogs.

    PubMed

    Galofré, Juan C; Chacón, Ana M; Latif, Rauf

    2013-12-01

    The thyroid-stimulating hormone (TSH) receptor (TSHR) is a major regulator of thyroid function and growth, and is the key antigen in several pathological conditions including hyperthyroidism, hypothyroidism, and thyroid tumors. Various effective treatment strategies are currently available for many of these clinical conditions such as antithyroid drugs or radioiodine therapy, but they are not devoid of side effects. In addition, treatment of complications of Graves' disease such as Graves' ophthalmopathy is often difficult and unsatisfactory using current methods. Recent advances in basic research on both in vitro and in vivo models have suggested that TSH analogs could be used for diagnosis and treatment of some of the thyroid diseases. The advent of high-throughput screening methods has resulted in a group of TSH analogs called small molecules, which have the potential to be developed as promising drugs. Small molecules are low molecular weight compounds with agonist, antagonist and, in some cases, inverse agonist activity on TSHR. This short review will focus on current advances in development of TSH analogs and their potential clinical applications. Rapid advances in this field may lead to the conduct of clinical trials of small molecules related to TSHR for the management of Graves' disease, thyroid cancer, and thyroid-related osteoporosis in the coming years. Copyright © 2012 SEEN. Published by Elsevier Espana. All rights reserved.

  20. Model of urban water management towards water sensitive city: a literature review

    NASA Astrophysics Data System (ADS)

    Maftuhah, D. I.; Anityasari, M.; Sholihah, M.

    2018-04-01

    Nowadays, many cities are facing with complex issues such as climate change, social, economic, culture, and environmental problems, especially urban water. In other words, the city has to struggle with the challenge to make sure its sustainability in all aspects. This research focuses on how to ensure the city sustainability and resilience on urban water management. Many research were not only conducted in urban water management, but also in sustainability itself. Moreover, water sustainability shifts from urban water management into water sensitive city. This transition needs comprehensive aspects such as social, institutional dynamics, technical innovation, and local contents. Some literatures about model of urban water management and the transition towards water sensitivity had been reviewed in this study. This study proposed discussion about model of urban water management and the transition towards water sensitive city. Research findings suggest that there are many different models developed in urban water management, but they are not comprehensive yet and only few studies discuss about the transition towards water sensitive and resilience city. The drawbacks of previous research can identify and fulfill the gap of this study. Therefore, the paper contributes a general framework for the urban water management modelling studies.

  1. A Water Temperature Simulation Model for Rice Paddies With Variable Water Depths

    NASA Astrophysics Data System (ADS)

    Maruyama, Atsushi; Nemoto, Manabu; Hamasaki, Takahiro; Ishida, Sachinobu; Kuwagata, Tsuneo

    2017-12-01

    A water temperature simulation model was developed to estimate the effects of water management on the thermal environment in rice paddies. The model was based on two energy balance equations: for the ground and for the vegetation, and considered the water layer and changes in the aerodynamic properties of its surface with water depth. The model was examined with field experiments for water depths of 0 mm (drained conditions) and 100 mm (flooded condition) at two locations. Daily mean water temperatures in the flooded condition were mostly higher than in the drained condition in both locations, and the maximum difference reached 2.6°C. This difference was mainly caused by the difference in surface roughness of the ground. Heat exchange by free convection played an important role in determining water temperature. From the model simulation, the temperature difference between drained and flooded conditions was more apparent under low air temperature and small leaf area index conditions; the maximum difference reached 3°C. Most of this difference occurred when the range of water depth was lower than 50 mm. The season-long variation in modeled water temperature showed good agreement with an observation data set from rice paddies with various rice-growing seasons, for a diverse range of water depths (root mean square error of 0.8-1.0°C). The proposed model can estimate water temperature for a given water depth, irrigation, and drainage conditions, which will improve our understanding of the effect of water management on plant growth and greenhouse gas emissions through the thermal environment of rice paddies.

  2. Modeled ground water age distributions

    USGS Publications Warehouse

    Woolfenden, Linda R.; Ginn, Timothy R.

    2009-01-01

    The age of ground water in any given sample is a distributed quantity representing distributed provenance (in space and time) of the water. Conventional analysis of tracers such as unstable isotopes or anthropogenic chemical species gives discrete or binary measures of the presence of water of a given age. Modeled ground water age distributions provide a continuous measure of contributions from different recharge sources to aquifers. A numerical solution of the ground water age equation of Ginn (1999) was tested both on a hypothetical simplified one-dimensional flow system and under real world conditions. Results from these simulations yield the first continuous distributions of ground water age using this model. Complete age distributions as a function of one and two space dimensions were obtained from both numerical experiments. Simulations in the test problem produced mean ages that were consistent with the expected value at the end of the model domain for all dispersivity values tested, although the mean ages for the two highest dispersivity values deviated slightly from the expected value. Mean ages in the dispersionless case also were consistent with the expected mean ages throughout the physical model domain. Simulations under real world conditions for three dispersivity values resulted in decreasing mean age with increasing dispersivity. This likely is a consequence of an edge effect. However, simulations for all three dispersivity values tested were mass balanced and stable demonstrating that the solution of the ground water age equation can provide estimates of water mass density distributions over age under real world conditions.

  3. Altered basaltic glass - A terrestrial analog to the soil of Mars

    NASA Technical Reports Server (NTRS)

    Allen, C. C.; Jercinovic, M.; Keil, K.; Gooding, J. L.

    1981-01-01

    In order to understand the nature of weathering processes and the formation of clay-like substances on Mars, analogous terrestrial processes and materials have been examined including sideromelane and palagonite. It is shown that palagonite is a good analog to the soil of Mars to the level of precision available from Viking and ground-based telescopic spectral measurements. Points of resemblance between the two materials include bulk chemical composition, particle size, reflectance spectra, and magnetic properties. A mechanism for the formation of Martian soil, based on a palagonite model, is proposed.

  4. Subcritical water extractor for Mars analog soil analysis.

    PubMed

    Amashukeli, Xenia; Grunthaner, Frank J; Patrick, Steven B; Yung, Pun To

    2008-06-01

    Abstract Technologies that enable rapid and efficient extraction of biomarker compounds from various solid matrices are a critical requirement for the successful implementation of in situ chemical analysis of the martian regolith. Here, we describe a portable subcritical water extractor that mimics multiple organic solvent polarities by tuning the dielectric constant of liquid water through adjustment of temperature and pressure. Soil samples, collected from the Yungay region of the Atacama Desert (martian regolith analogue) in the summer of 2005, were used to test the instrument's performance. The total organic carbon was extracted from the samples at concentrations of 0.2-55.4 parts per million. The extraction data were compared to the total organic carbon content in the bulk soil, which was determined via a standard analytical procedure. The instrument's performance was examined over the temperature range of 25-250 degrees C at a fixed pressure of 20.7 MPa. Under these conditions, water remains in a subcritical fluid state with a dielectric constant varying between approximately 80 (at 25 degrees C) and approximately 30 (at 250 degrees C).

  5. Detecting and estimating errors in 3D restoration methods using analog models.

    NASA Astrophysics Data System (ADS)

    José Ramón, Ma; Pueyo, Emilio L.; Briz, José Luis

    2015-04-01

    Some geological scenarios may be important for a number of socio-economic reasons, such as water or energy resources, but the available underground information is often limited, scarce and heterogeneous. A truly 3D reconstruction, which is still necessary during the decision-making process, may have important social and economic implications. For this reason, restoration methods were developed. By honoring some geometric or mechanical laws, they help build a reliable image of the subsurface. Pioneer methods were firstly applied in 2D (balanced and restored cross-sections) during the sixties and seventies. Later on, and due to the improvements of computational capabilities, they were extended to 3D. Currently, there are some academic and commercial restoration solutions; Unfold by the Université de Grenoble, Move by Midland Valley Exploration, Kine3D (on gOcad code) by Paradigm, Dynel3D by igeoss-Schlumberger. We have developed our own restoration method, Pmag3Drest (IGME-Universidad de Zaragoza), which is designed to tackle complex geometrical scenarios using paleomagnetic vectors as a pseudo-3D indicator of deformation. However, all these methods have limitations based on the assumptions they need to establish. For this reason, detecting and estimating uncertainty in 3D restoration methods is of key importance to trust the reconstructions. Checking the reliability and the internal consistency of every method, as well as to compare the results among restoration tools, is a critical issue never tackled so far because of the impossibility to test out the results in Nature. To overcome this problem we have developed a technique using analog models. We built complex geometric models inspired in real cases of superposed and/or conical folding at laboratory scale. The stratigraphic volumes were modeled using EVA sheets (ethylene vinyl acetate). Their rheology (tensile and tear strength, elongation, density etc) and thickness can be chosen among a large number of values

  6. Second generation benzofuranone ring substituted noscapine analogs: Synthesis and biological evaluation

    PubMed Central

    Mishra, Ram Chandra; Karna, Prasanthi; Gundala, Sushma Reddy; Pannu, Vaishali; Stanton, Richard A.; Gupta, Kamlesh Kumar; Robinson, Mary; Lopus, Manu; Wilson, Leslie; Henary, Maged; Aneja, Ritu

    2011-01-01

    Microtubules, composed of α/β tubulin heterodimers, represent a validated target for cancer chemotherapy. Thus, tubulin- and microtubule-binding antimitotic drugs such as taxanes and vincas are widely employed for the chemotherapeutic management of various malignancies. Although quite successful in the clinic, these drugs are associated with severe toxicity and drug resistance problems. Noscapinoids represent an emerging class of microtubule-modulating anticancer agents based upon the parent molecule noscapine, a naturally-occurring non-toxic cough-suppressant opium alkaloid. Here we report in silico molecular modeling, chemical synthesis and biological evaluation of novel analogs derived by modification at position-7 of the benzofuranone ring system of noscapine. The synthesized analogs were evaluated for their tubulin polymerization activity and their biological activity was examined by their antiproliferative potential using representative cancer cell lines from varying tissue-origin [A549 (lung), CEM (lymphoma), MIA PaCa-2 (pancreatic), MCF-7 (breast) and PC-3 (prostate)]. Cell-cycle studies were performed to explore their ability to halt the cell-cycle and induce subsequent apoptosis. The varying biological activity of these analogs that differ in the nature and bulk of substituent at position-7 was rationalized utilizing predictive in silico molecular modeling. PMID:21501599

  7. Anti-inflammatory effect of thalidomide dithiocarbamate and dithioate analogs.

    PubMed

    Talaat, Roba; El-Sayed, Waheba; Agwa, Hussein S; Gamal-Eldeen, Amira M; Moawia, Shaden; Zahran, Magdy A H

    2015-08-05

    Thalidomide has anti-inflammatory, immunomodulatory, and anti-angiogenic properties. It has been used to treat a variety of cancers and autoimmune diseases. This study aimed to characterize anti-inflammatory activities of novel thalidomide analogs by exploring their effects on splenocytes proliferation and macrophage functions and their antioxidant activity. MTT assay was used to assess the cytotoxic effect of thalidomide analogs against splenocytes. Tumor necrosis factor (TNF-α) and nuclear factor kappa B (NF-κB-P65) were determined by enzyme-linked immunosorbent assay (ELISA). Nitric oxide (NO) was estimated by colorimetric assay. Antioxidant activity was examined by ORAC assay. Our results demonstrated that thalidomide dithioate analog 2 and thalidomide dithiocarbamate analog 4 produced a slight increase in splenocyte proliferation compared with thalidomide. Thalidomide dithiocarbamate analog 1 is a potent inhibitor of TNF-α production, whereas thalidomide dithiocarbamate analog 5 is a potent inhibitor of both TNF-α and NO. Analog 2 has a pronounced inhibitory effect on NF-κB-P65 production level. All thalidomide analogs showed prooxidant activity against hydroxyl (OH) radical. Analog 1 and thalidomide dithioate analog 3 have prooxidant activity against peroxyl (ROO) radical in relation to thalidomide. On the other hand, analog 4 has a potent scavenging capacity against peroxyl (ROO) radical compared with thalidomide. Taken together, the results of this study suggest that thalidomide analogs might have valuable anti-inflammatory activities with more pronounced effect than thalidomide itself. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  8. Low-Power Analog Processing for Sensing Applications: Low-Frequency Harmonic Signal Classification

    PubMed Central

    White, Daniel J.; William, Peter E.; Hoffman, Michael W.; Balkir, Sina

    2013-01-01

    A low-power analog sensor front-end is described that reduces the energy required to extract environmental sensing spectral features without using Fast Fouriér Transform (FFT) or wavelet transforms. An Analog Harmonic Transform (AHT) allows selection of only the features needed by the back-end, in contrast to the FFT, where all coefficients must be calculated simultaneously. We also show that the FFT coefficients can be easily calculated from the AHT results by a simple back-substitution. The scheme is tailored for low-power, parallel analog implementation in an integrated circuit (IC). Two different applications are tested with an ideal front-end model and compared to existing studies with the same data sets. Results from the military vehicle classification and identification of machine-bearing fault applications shows that the front-end suits a wide range of harmonic signal sources. Analog-related errors are modeled to evaluate the feasibility of and to set design parameters for an IC implementation to maintain good system-level performance. Design of a preliminary transistor-level integrator circuit in a 0.13 μm complementary metal-oxide-silicon (CMOS) integrated circuit process showed the ability to use online self-calibration to reduce fabrication errors to a sufficiently low level. Estimated power dissipation is about three orders of magnitude less than similar vehicle classification systems that use commercially available FFT spectral extraction. PMID:23892765

  9. Verification of reflectance models in turbid waters

    NASA Technical Reports Server (NTRS)

    Tanis, F. J.; Lyzenga, D. R.

    1981-01-01

    Inherent optical parameters of very turbid waters were used to evaluate existing water reflectance models. Measured upwelling radiance spectra and Monte Carlo simulations of the radiative transfer equations were compared with results from models based upon two flow, quasi-single scattering, augmented isotropic scattering, and power series approximation. Each model was evaluated for three separate components of upwelling radiance: (1) direct sunlight; (2) diffuse skylight; and (3) internally reflected light. Limitations of existing water reflectance models as applied to turbid waters and possible applications to the extraction of water constituent information are discussed.

  10. Monitoring and Modelling of Salinity Behaviour in Drinking Water Ponds in Southern Bangladesh

    NASA Astrophysics Data System (ADS)

    Hoque, M. A.; Williams, A.; Mathewson, E.; Rahman, A. K. M. M.; Ahmed, K. M.; Scheelbeek, P. F. D.; Vineis, P.; Butler, A. P.

    2015-12-01

    Drinking water in southern Bangladesh is provided by a variety of sources including constructed storage ponds, seasonal rainwater and, ubiquitously saline, shallow groundwater. The ponds, the communal reservoirs for harvested rainwater, also tend to be saline, some as high as 2 g/l. Drinking water salinity has several health impacts including high blood pressure associated major risk factor for several cardio-vascular diseases. Two representative drinking water ponds in Dacope Upazila of Khulna District in southwest Bangladesh were monitored over two years for rainfall, evaporation, pond and groundwater level, abstraction, and solute concentration, to better understand the controls on drinking water salinity. Water level monitoring at both ponds shows groundwater levels predominantly below the pond level throughout the year implying a downward gradient. The grain size analysis of the underlying sediments gives an estimated hydraulic conductivity of 3E-8 m/s allowing limited seepage loss. Water balance modelling indicates that the seepage has a relatively minor effect on the pond level and that the bulk of the losses come from the combination of evaporation and abstraction particularly in dry season when precipitation, the only inflow to the pond, is close to zero. Seasonal variation in salinity (electrical conductivities, EC, ranged between 1500 to 3000 μS/cm) has been observed, and are primarily due to dilution from rainfall and concentration from evaporation, except on one occasion when EC reached 16,000 μS/cm due to a breach in the pond levee. This event was analogous to the episodic inundation that occurs from tropical cyclone storm surges and appears to indicate that such events are important for explaining the widespread salinisation of surface water and shallow groundwater bodies in coastal areas. A variety of adaptations (either from practical protection measures) or novel alternative drinking sources (such as aquifer storage and recovery) can be applied

  11. Activation and inhibition of adenylyl cyclase isoforms by forskolin analogs.

    PubMed

    Pinto, Cibele; Papa, Dan; Hübner, Melanie; Mou, Tung-Chung; Lushington, Gerald H; Seifert, Roland

    2008-04-01

    Adenylyl cyclase (AC) isoforms 1 to 9 are differentially expressed in tissues and constitute an interesting drug target. ACs 1 to 8 are activated by the diterpene, forskolin (FS). It is unfortunate that there is a paucity of AC isoform-selective activators. To develop such compounds, an understanding of the structure/activity relationships of diterpenes is necessary. Therefore, we examined the effects of FS and nine FS analogs on ACs 1, 2, and 5 expressed in Spodoptera frugiperda insect cells. Diterpenes showed the highest potencies at AC1 and the lowest potencies at AC2. We identified full agonists, partial agonists, antagonists, and inverse agonists, i.e., diterpenes that reduced basal AC activity. Each AC isoform exhibited a distinct pharmacological profile. AC2 showed the highest basal activity of all AC isoforms and highest sensitivity to inverse agonistic effects of 1-deoxy-forskolin, 7-deacetyl-1,9-dideoxy-forskolin, and, particularly, BODIPY-forskolin. In contrast, BODIPY-forskolin acted as partial agonist at the other ACs. 1-Deoxy-forskolin analogs were devoid of agonistic activity at ACs but antagonized the effects of FS in a mixed competitive/noncompetitive manner. At purified catalytic AC subunits, BODIPY-forskolin acted as weak partial agonist/strong partial antagonist. Molecular modeling revealed that the BODIPY group rotates promiscuously outside of the FS-binding site. Collectively, ACs are not uniformly activated and inhibited by FS and FS analogs, demonstrating the feasibility to design isoform-selective FS analogs. The two- and multiple-state models, originally developed to conceptualize ligand effects at G-protein-coupled receptors, can be applied to ACs to explain certain experimental data.

  12. Modelling water use in global hydrological models: review, challenges and directions

    NASA Astrophysics Data System (ADS)

    Bierkens, M. F.; de Graaf, I.; Wada, Y.; Wanders, N.; Van Beek, L. P.

    2017-12-01

    During the late 1980s and early 1990s, awareness of the shortage of global water resources lead to the first detailed global water resources assessments using regional statistics of water use and observations of meteorological and hydrological variables. Shortly thereafter, the first macroscale hydrological models (MHM) appeared. In these models, blue water (i.e., surface water and renewable groundwater) availability was calculated by accumulating runoff over a stream network and comparing it with population densities or with estimated water demand for agriculture, industry and households. In this talk we review the evolution of human impact modelling in global land models with a focus on global water resources, touching upon developments of the last 15 years: i.e. calculating human water scarcity; estimating groundwater depletion; adding dams and reservoirs; fully integrating water use (demand, withdrawal, consumption, return flow) in the hydrology; simulating the effects of land use change. We show example studies for each of these steps. We identify We identify major challenges that hamper the further development of integrated water resources modelling. Examples of these are: 1) simulating reservoir operations; 2) including local infrastructure and redistribution; 3) using the correct allocations rules; 4) projecting future water demand and water use. For each of these challenges we signify promising directions for further research.

  13. Piperazine-based nucleic acid analogs

    DOEpatents

    Schmidt, Jurgen; Silks, Louis A.; Michalczyk, Ryszard

    2005-01-11

    A novel nucleoside analog is disclosed which comprises a piperazine ring in the place of the ring ribose or deoxyribose sugar. Monomers utilizing a broad variety of nucleobases are disclosed, as well as oligomers comprising the monomers disclosed herein linked by a variety of linkages, including amide, phosphonamide, and sulfonamide linkages. A method of synthesizing the nucleoside analogs is also disclosed.

  14. Natural analog studies: Licensing perspective

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bradbury, J.W.

    1995-09-01

    This report describes the licensing perspective of the term {open_quotes}natural analog studies{close_quotes} as used in CFR Part 60. It describes the misunderstandings related to its definition which has become evident during discussions at the U.S Nuclear Regulatory Commission meetings and tries to clarify the appropriate applications of natural analog studies to aspects of repository site characterization.

  15. Formal Darwinism, the individual-as-maximizing-agent analogy and bet-hedging

    PubMed Central

    Grafen, A.

    1999-01-01

    The central argument of The origin of species was that mechanical processes (inheritance of features and the differential reproduction they cause) can give rise to the appearance of design. The 'mechanical processes' are now mathematically represented by the dynamic systems of population genetics, and the appearance of design by optimization and game theory in which the individual plays the part of the maximizing agent. Establishing a precise individual-as-maximizing-agent (IMA) analogy for a population-genetics system justifies optimization approaches, and so provides a modern formal representation of the core of Darwinism. It is a hitherto unnoticed implication of recent population-genetics models that, contrary to a decades-long consensus, an IMA analogy can be found in models with stochastic environments (subject to a convexity assumption), in which individuals maximize expected reproductive value. The key is that the total reproductive value of a species must be considered as constant, so therefore reproductive value should always be calculated in relative terms. This result removes a major obstacle from the theoretical challenge to find a unifying framework which establishes the IMA analogy for all of Darwinian biology, including as special cases inclusive fitness, evolutionarily stable strategies, evolutionary life-history theory, age-structured models and sex ratio theory. This would provide a formal, mathematical justification of fruitful and widespread but 'intentional' terms in evolutionary biology, such as 'selfish', 'altruism' and 'conflict'.

  16. Heat Flow vs. Cash Flow: A Banking Analogy

    NASA Astrophysics Data System (ADS)

    Wynn, Charles M., Sr.

    1997-04-01

    An analogy is drawn between the withdrawal of money from an automated teller machine (ATM) and an exothermic chemical reaction. In the analogy the amount in an individual's account is regarded as the system and the money withdrawn is regarded as part of the surroundings. Diagrams are used to present the analogy. An analogy can be drawn also between a deposit into an account and an endothermic chemical reaction.

  17. Analog detection for cavity lifetime spectroscopy

    DOEpatents

    Zare, Richard N.; Harb, Charles C.; Paldus, Barbara A.; Spence, Thomas G.

    2001-05-15

    An analog detection system for determining a ring-down rate or decay rate 1/.tau. of an exponentially decaying ring-down beam issuing from a lifetime or ring-down cavity during a ring-down phase. Alternatively, the analog detection system determines a build-up rate of an exponentially growing beam issuing from the cavity during a ring-up phase. The analog system can be employed in continuous wave cavity ring-down spectroscopy (CW CRDS) and pulsed CRDS (P CRDS) arrangements utilizing any type of ring-down cavity including ring-cavities and linear cavities.

  18. Analog detection for cavity lifetime spectroscopy

    DOEpatents

    Zare, Richard N.; Harb, Charles C.; Paldus, Barbara A.; Spence, Thomas G.

    2003-01-01

    An analog detection system for determining a ring-down rate or decay rate 1/.tau. of an exponentially decaying ring-down beam issuing from a lifetime or ring-down cavity during a ring-down phase. Alternatively, the analog detection system determines a build-up rate of an exponentially growing beam issuing from the cavity during a ring-up phase. The analog system can be employed in continuous wave cavity ring-down spectroscopy (CW CRDS) and pulsed CRDS (P CRDS) arrangements utilizing any type of ring-down cavity including ring-cavities and linear cavities.

  19. Rubrolides as model for the development of new lactones and their aza analogs as potential photosynthesis inhibitors.

    PubMed

    Pereira, Ulisses A; Barbosa, Luiz C A; Demuner, Antônio J; Silva, Antônio A; Bertazzini, Michele; Forlani, Giuseppe

    2015-07-01

    Natural phytotoxins and their synthetic analogs are a potential source of new bioactive compounds for agriculture. Analogs of rubrolides, a class of γ-alkylidene-γ-lactones isolated from different ascidians, have been shown to interfere with the photosynthetic electron-transport chain, yet their activity needs to be improved. With this aim, ten 5-aryl-6-benzyl-4-bromopyridazin-3(2H)-ones were prepared in yields ranging from 44 to 88% by reaction of their correspondent γ-alkylidene-γ-lactones with NH2 NH2 . The structures of these rubrolide analogs were determined by (1) H- and (13) C-NMR, 2D-NMR (COSY and HETCOR), NOE difference, and MS techniques. These compounds were evaluated for their abilities of interfering with the light-driven reduction of ferricyanide by isolated spinach chloroplasts. Lactones with electron-withdrawing substituents in the para-position of the benzylidene ring were the most effective inhibitors. Characterization of the activity of 11b/11b' suggested a mechanism based on the interaction with the plastoquinone binding site of photosystem II. Addition of several compounds to the culture medium of a cyanobacterial model strain was found to inhibit algal growth. However, the relative effectiveness was not consistent with their activity in vitro, suggesting the occurrence of multiple targets and/or detoxyfication mechanisms. Indeed, the compounds showed differential effects on the heterotrophic growth of some crop species, Cucumis sativus and Sorghum bicolor. Pyridazin-3(2H)-ones 12e, 12i, and 12j, which have been found poorly active against the photosynthetic electron transport, were the most effective in inhibiting the growth of some weeds, Ipomoea grandifolia and Brachiaria decumbens, under greenhouse conditions. Copyright © 2015 Verlag Helvetica Chimica Acta AG, Zürich.

  20. New in Situ Measurements of the Viscosity of Gas Clathrate Hydrate Slurries Formed from Model Water-in-Oil Emulsions.

    PubMed

    Majid, Ahmad A A; Wu, David T; Koh, Carolyn A

    2017-10-24

    In situ rheological measurements for clathrate hydrate slurries were performed using a high pressure rheometer to determine the effect of hydrate particles on the viscosity and transportability of these slurries. These measurements were conducted using a well-characterized model water-in-oil emulsion ( Delgado-Linares et al. Model Water in-Oil Emulsions for Gas Hydrate Studies in Oil Continuous Systems . Energy Fuels 2013 , 27 , 4564 - 4573 ). The emulsion consists of a model liquid hydrocarbon, water, and a surfactant mixture of sorbitane monooleate 80 (Span 80) and sodium di-2-ethylhexylsulfosuccinate (Aerosol OT, AOT). This emulsion was used as an analog to water-in-crude oil (w/o) emulsions and provides reproducible results. The flow properties of the model w/o emulsion prior to hydrate formation were investigated in terms of several parameters including water percentage, temperature and pressure. A general equation that describes the viscosity of the emulsion as a function of the aforementioned parameters was developed. This general equation was able to predict the viscosity of a saturated emulsion at various temperatures and water percentages to within ±13% error. The general equation was then used to analyze the effect of hydrate formation on the transportability of gas hydrate slurries. As for hydrate slurries investigation, measurements were performed using methane gas as the hydrate former and a straight vane impeller as a stirring system. Tests were conducted at constant temperature and pressure (1 °C and 1500 psig of methane) and water percentages ranging from 5 to 30 vol %. Results of this work were analyzed and presented in terms of relative values, i.e., viscosities of the slurries relative to the viscosities of the continuous phase at similar temperature and pressure. In this work, a correlation to predict the relative viscosity of a hydrate slurry at various hydrate volume fractions was developed. Analysis of the developed correlation showed that

  1. NASA HRP Immunology Discipline - Use of Terrestrial Analogs

    NASA Technical Reports Server (NTRS)

    Crucian, Brian

    2014-01-01

    Due to the cost and operational constraints, as well as technical implementation limitations, it is desirous to perform relevant space physiology investigations first in terrestrial 'space analogs'. This is particularly true for initial investigations, which may then provide appropriate focus for subsequent flight investigations, or for mechanistic investigations that simply cannot be performed during spaceflight. Appropriate analog choice is extremely important. There are a wide variety of terrestrial space analogs, each relevant to a particular physiological discipline (or disciplines) and each with a particular fidelity (or lack thereof) to spaceflight, and each with unique operational constraints. The HRP Immunology Discipline is tasked with managing the HRP Risk concerning clinical risk for Astronaut crews related to spaceflight-associated immune dysregulation. Such dysregulation has been documented to occur during spaceflight, and found to persist for the duration of a 6-month ISS mission. Studies continue to characterize the onorbit phenomenon, but it generally consists of diminished immunocyte function, dysregulated cytokine profiles, and persistent herpesvirus reactivation. Causes are thought to synergistically include microgravity, psychological or physiological stress, radiation, and/or circadian misalignment. An appropriate terrestrial analog for immune dysregulation would replicate as many of these influences as possible. Such analogs may include clinostat or bioreactor cell culture (microgravity), hindlimb suspension (stress, fluid shifts, hypokinesis), or human deployment to remote or extreme environments (isolation, stress, circadian). Also, the laboratory setting may be used as an analog, or to augment analogs, such as sleep deprivation/misalignment or human centrifugation to replicate gravitational stress. As an appropriate example of a NASA Disciplines use of Terrestrial space analogs, this talk will discuss spaceflight associated immune

  2. The Sudbury-Serenitatis analogy and 'so-called' pristine nonmare rocks

    NASA Technical Reports Server (NTRS)

    Warren, Paul H.

    1992-01-01

    The Serenitatis Basin is the one lunar basin from which we confidently identify a suite of samples as pieces of the impact melt sheet: the distinctive Apollo 17 noritic breccias. Recent studies of the Sudbury Complex indicate that its 'irruptive' is almost entirely of impact-melt origin, making it the closest terrestrial analog to the Serenitatis melt sheet. Any attempt to model the evolution of the Moon's crust should be compatible with the relatively well-understood Sudbury Complex. However, the Sudbury-Moon analogy might be a misleading oversimplification, if applied too rigidly. The cause of evolutionary differences between the Serenitatis impact melt and the Sudbury impact melt is discussed.

  3. Analogical and Category-Based Inference: A Theoretical Integration with Bayesian Causal Models

    ERIC Educational Resources Information Center

    Holyoak, Keith J.; Lee, Hee Seung; Lu, Hongjing

    2010-01-01

    A fundamental issue for theories of human induction is to specify constraints on potential inferences. For inferences based on shared category membership, an analogy, and/or a relational schema, it appears that the basic goal of induction is to make accurate and goal-relevant inferences that are sensitive to uncertainty. People can use source…

  4. Carcass analog addition enhances juvenile Atlantic salmon (Salmo salar) growth and condition

    USGS Publications Warehouse

    Guyette, Margaret Q.; Loftin, Cynthia S.; Zydlewski, Joseph D.

    2013-01-01

    Our study used historic marine-derived nutrient (MDN) delivery timing to simulate potential effects of restored connectivity on juvenile Atlantic salmon (ATS; Salmo salar) growth and condition. Four headwater streams were stocked with ATS young of the year (YOY) and received carcass analog additions (0.10 kg·m–2 wetted area) in treatment reaches to match the timing of sea lamprey (Petromyzon marinus) spawning. Individual ATS mass was 33%–48% greater and standard length was 9%–15% greater in treatment reaches relative to control reaches for 4 months following nutrient additions. Percent total lipids in YOY ATS were twice as great in treatment reaches 1 month following carcass analog additions and remained elevated in treatment fish for 2 more months. Absolute growth rates, based on otolith microstructure analysis, correlated with water temperature fluctuations in all reaches and were elevated by an average of 0.07 mm·day–1 in treatment reaches for 1 month following carcass analog additions. Simulated sea lamprey MDNs increased juvenile ATS growth, which, via potential increases in overwinter survival and decreases in smolt age, may contribute to population persistence and ecosystem productivity.

  5. Hydraulic modeling of clay ceramic water filters for point-of-use water treatment.

    PubMed

    Schweitzer, Ryan W; Cunningham, Jeffrey A; Mihelcic, James R

    2013-01-02

    The acceptability of ceramic filters for point-of-use water treatment depends not only on the quality of the filtered water, but also on the quantity of water the filters can produce. This paper presents two mathematical models for the hydraulic performance of ceramic water filters under typical usage. A model is developed for two common filter geometries: paraboloid- and frustum-shaped. Both models are calibrated and evaluated by comparison to experimental data. The hydraulic models are able to predict the following parameters as functions of time: water level in the filter (h), instantaneous volumetric flow rate of filtrate (Q), and cumulative volume of water produced (V). The models' utility is demonstrated by applying them to estimate how the volume of water produced depends on factors such as the filter shape and the frequency of filling. Both models predict that the volume of water produced can be increased by about 45% if users refill the filter three times per day versus only once per day. Also, the models predict that filter geometry affects the volume of water produced: for two filters with equal volume, equal wall thickness, and equal hydraulic conductivity, a filter that is tall and thin will produce as much as 25% more water than one which is shallow and wide. We suggest that the models can be used as tools to help optimize filter performance.

  6. A Computational Account of Children's Analogical Reasoning: Balancing Inhibitory Control in Working Memory and Relational Representation

    ERIC Educational Resources Information Center

    Morrison, Robert G.; Doumas, Leonidas A. A.; Richland, Lindsey E.

    2011-01-01

    Theories accounting for the development of analogical reasoning tend to emphasize either the centrality of relational knowledge accretion or changes in information processing capability. Simulations in LISA (Hummel & Holyoak, 1997, 2003), a neurally inspired computer model of analogical reasoning, allow us to explore how these factors may…

  7. Developing Analogy Cost Estimates for Space Missions

    NASA Technical Reports Server (NTRS)

    Shishko, Robert

    2004-01-01

    The analogy approach in cost estimation combines actual cost data from similar existing systems, activities, or items with adjustments for a new project's technical, physical or programmatic differences to derive a cost estimate for the new system. This method is normally used early in a project cycle when there is insufficient design/cost data to use as a basis for (or insufficient time to perform) a detailed engineering cost estimate. The major limitation of this method is that it relies on the judgment and experience of the analyst/estimator. The analyst must ensure that the best analogy or analogies have been selected, and that appropriate adjustments have been made. While analogy costing is common, there is a dearth of advice in the literature on the 'adjustment methodology', especially for hardware projects. This paper discusses some potential approaches that can improve rigor and repeatability in the analogy costing process.

  8. Post-processing Seasonal Precipitation Forecasts via Integrating Climate Indices and the Analog Approach

    NASA Astrophysics Data System (ADS)

    Liu, Y.; Zhang, Y.; Wood, A.; Lee, H. S.; Wu, L.; Schaake, J. C.

    2016-12-01

    Seasonal precipitation forecasts are a primary driver for seasonal streamflow prediction that is critical for a range of water resources applications, such as reservoir operations and drought management. However, it is well known that seasonal precipitation forecasts from climate models are often biased and also too coarse in spatial resolution for hydrologic applications. Therefore, post-processing procedures such as downscaling and bias correction are often needed. In this presentation, we discuss results from a recent study that applies a two-step methodology to downscale and correct the ensemble mean precipitation forecasts from the Climate Forecast System (CFS). First, CFS forecasts are downscaled and bias corrected using monthly reforecast analogs: we identify past precipitation forecasts that are similar to the current forecast, and then use the finer-scale observational analysis fields from the corresponding dates to represent the post-processed ensemble forecasts. Second, we construct the posterior distribution of forecast precipitation from the post-processed ensemble by integrating climate indices: a correlation analysis is performed to identify dominant climate indices for the study region, which are then used to weight the analysis analogs selected in the first step using a Bayesian approach. The methodology is applied to the California Nevada River Forecast Center (CNRFC) and the Middle Atlantic River Forecast Center (MARFC) regions for 1982-2015, using the North American Land Data Assimilation System (NLDAS-2) precipitation as the analysis. The results from cross validation show that the post-processed CFS precipitation forecast are considerably more skillful than the raw CFS with the analog approach only. Integrating climate indices can further improve the skill if the number of ensemble members considered is large enough; however, the improvement is generally limited to the first couple of months when compared against climatology. Impacts of

  9. Crows spontaneously exhibit analogical reasoning.

    PubMed

    Smirnova, Anna; Zorina, Zoya; Obozova, Tanya; Wasserman, Edward

    2015-01-19

    Analogical reasoning is vital to advanced cognition and behavioral adaptation. Many theorists deem analogical thinking to be uniquely human and to be foundational to categorization, creative problem solving, and scientific discovery. Comparative psychologists have long been interested in the species generality of analogical reasoning, but they initially found it difficult to obtain empirical support for such thinking in nonhuman animals (for pioneering efforts, see [2, 3]). Researchers have since mustered considerable evidence and argument that relational matching-to-sample (RMTS) effectively captures the essence of analogy, in which the relevant logical arguments are presented visually. In RMTS, choice of test pair BB would be correct if the sample pair were AA, whereas choice of test pair EF would be correct if the sample pair were CD. Critically, no items in the correct test pair physically match items in the sample pair, thus demanding that only relational sameness or differentness is available to support accurate choice responding. Initial evidence suggested that only humans and apes can successfully learn RMTS with pairs of sample and test items; however, monkeys have subsequently done so. Here, we report that crows too exhibit relational matching behavior. Even more importantly, crows spontaneously display relational responding without ever having been trained on RMTS; they had only been trained on identity matching-to-sample (IMTS). Such robust and uninstructed relational matching behavior represents the most convincing evidence yet of analogical reasoning in a nonprimate species, as apes alone have spontaneously exhibited RMTS behavior after only IMTS training. Copyright © 2015 Elsevier Ltd. All rights reserved.

  10. Nambe Pueblo Water Budget and Forecasting model.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Brainard, James Robert

    2009-10-01

    This report documents The Nambe Pueblo Water Budget and Water Forecasting model. The model has been constructed using Powersim Studio (PS), a software package designed to investigate complex systems where flows and accumulations are central to the system. Here PS has been used as a platform for modeling various aspects of Nambe Pueblo's current and future water use. The model contains three major components, the Water Forecast Component, Irrigation Scheduling Component, and the Reservoir Model Component. In each of the components, the user can change variables to investigate the impacts of water management scenarios on future water use. The Watermore » Forecast Component includes forecasting for industrial, commercial, and livestock use. Domestic demand is also forecasted based on user specified current population, population growth rates, and per capita water consumption. Irrigation efficiencies are quantified in the Irrigated Agriculture component using critical information concerning diversion rates, acreages, ditch dimensions and seepage rates. Results from this section are used in the Water Demand Forecast, Irrigation Scheduling, and the Reservoir Model components. The Reservoir Component contains two sections, (1) Storage and Inflow Accumulations by Categories and (2) Release, Diversion and Shortages. Results from both sections are derived from the calibrated Nambe Reservoir model where historic, pre-dam or above dam USGS stream flow data is fed into the model and releases are calculated.« less

  11. Perceptions of Rebuttal Analogy: Politeness and Implications for Persuasion.

    ERIC Educational Resources Information Center

    Whaley, Bryan B.

    1997-01-01

    States that recent theorizing about the role of analogy in persuasion suggests that "rebuttal" analogy addresses two communicative functions by serving as argument and a method of social attack. Examines message receivers' perceptions of rebuttal analogy and rebuttal analogy users. Finds that participants perceived the communicator using…

  12. Antarctic Space Analog Program

    NASA Technical Reports Server (NTRS)

    Palinkas, Lawrence A; Gunderson, E. K. Eric; Johnson, Jeffrey C.; Holland, Albert W.

    1998-01-01

    The primary aim of this project was to examine group dynamics and individual performance in extreme, isolated environments and identify human factors requirements for long-duration space missions using data collected in an analog environment. Specifically, we wished to determine: 1) the characteristics of social relations in small groups of individuals living and working together in extreme, isolated environments, and 2) the environmental, social and psychological determinants of performance effectiveness in such groups. These two issues were examined in six interrelated studies using data collected in small, isolated research stations in Antarctica from 1963 to the present. Results from these six studies indicated that behavior and performance on long-duration space flights is likely to be seasonal or cyclical, situational, social, and salutogenic in nature. The project responded to two NASA program emphases for FY 1997 as described in the NRA: 1) the primary emphasis of the Behavior and Performance Program on determining long-term individual and group performance responses to space, identifying critical factors affecting those responses and understanding underlying mechanisms involved in behavior and performance, and developing and using ground-based models and analogs for studying space-related behavior and performance; and 2) the emphasis of the Data Analysis Program on extended data analysis. Results from the study were used to develop recommendations for the design and development of pre-flight crew training and in-flight psychological countermeasures for long-duration manned space missions.

  13. Crop modeling applications in agricultural water management

    USGS Publications Warehouse

    Kisekka, Isaya; DeJonge, Kendall C.; Ma, Liwang; Paz, Joel; Douglas-Mankin, Kyle R.

    2017-01-01

    This article introduces the fourteen articles that comprise the “Crop Modeling and Decision Support for Optimizing Use of Limited Water” collection. This collection was developed from a special session on crop modeling applications in agricultural water management held at the 2016 ASABE Annual International Meeting (AIM) in Orlando, Florida. In addition, other authors who were not able to attend the 2016 ASABE AIM were also invited to submit papers. The articles summarized in this introductory article demonstrate a wide array of applications in which crop models can be used to optimize agricultural water management. The following section titles indicate the topics covered in this collection: (1) evapotranspiration modeling (one article), (2) model development and parameterization (two articles), (3) application of crop models for irrigation scheduling (five articles), (4) coordinated water and nutrient management (one article), (5) soil water management (two articles), (6) risk assessment of water-limited irrigation management (one article), and (7) regional assessments of climate impact (two articles). Changing weather and climate, increasing population, and groundwater depletion will continue to stimulate innovations in agricultural water management, and crop models will play an important role in helping to optimize water use in agriculture.

  14. Water Plan 2030: A Dynamic Education Model for Teaching Water Management Issues

    NASA Astrophysics Data System (ADS)

    Rupprecht, C.; Washburne, J.; Lansey, K.; Williams, A.

    2006-12-01

    Dynamic educational tools to assist teachers and students in recognizing the impacts of water management decisions in a realistic context are not readily available. Water policy issues are often complex and difficult for students trying to make meaningful connections between system components. To fill this need, we have developed a systems modeling-based educational decision support system (DSS) with supplementary materials. This model, called Water Plan 2030, represents a general semi-arid watershed; it allows users to examine water management alternatives by changing input values for various water uses and basin conditions and immediately receive graphical outputs to compare decisions. The main goal of our DSS model is to foster students' abilities to make knowledgeable decisions with regard to water resources issues. There are two reasons we have developed this model for traditional classroom settings. First, the DSS model provides teachers with a mechanism for educating students about inter-related hydrologic concepts, complex systems and facilitates discussion of water resources issues. Second, Water Plan 2030 encourages student discovery of cause/effect relationships in a dynamic, hands-on environment and develops the ability to realize the implications of water management alternatives. The DSS model has been utilized in an undergraduate, non-major science class for 5 course hours, each of the past 4 semesters. Accompanying the PC-based model are supplementary materials to improve the effectiveness of implementation by emphasizing important concepts and guiding learners through the model components. These materials include in-class tutorials, introductory questions, role-playing activities and homework extensions that have been revised after each user session, based on student and instructor feedback. Most recently, we have developed individual lessons that teach specific model functions and concepts. These modules provide teachers the flexibility to adapt

  15. Biotoxicity of Mars soils: 2. Survival of Bacillus subtilis and Enterococcus faecalis in aqueous extracts derived from six Mars analog soils

    NASA Astrophysics Data System (ADS)

    Schuerger, Andrew C.; Ming, Doug W.; Golden, D. C.

    2017-07-01

    The search for an extant microbiota on Mars depends on exploring sites that contain transient or permanent liquid water near the surface. Examples of possible sites for liquid water may be active recurring slope lineae (RSL) and fluid inclusions in ice or salt deposits. The presence of saline fluids on Mars will act to depress the freezing points of liquid water to as low as ‒60 °C, potentially permitting the metabolism and growth of halophilic microorganisms to temperatures significantly below the freezing point of pure water at 0 °C. In order to predict the potential risks of forward contamination by Earth microorganisms to subsurface sites on Mars with liquid brines, experiments were designed to characterize the short-term survival of two bacteria in aqueous soil solutions from six analog soils. The term ''soil'' is used here to denote any loose, unconsolidated matrix with no implications for the presence or absence of organics or biology. The analog soils were previously described (Schuerger et al., 2012, Planetary Space Sci., 72, 91-101), and represented crushed Basalt (benign control), Salt, Acid, Alkaline, Aeolian, and Phoenix analogs on Mars. The survival rates of spores of Bacillus subtilis and vegetative cells of Enterococcus faecalis were tested in soil solutions from each analog at 24, 0, or ‒70 °C for time periods up to 28 d. Survival of dormant spores of B. subtilis were mostly unaffected by incubation in the aqueous extracts of all six Mars analogs. In contrast, survival rates of E. faecalis cells were suppressed by all soil solutions when incubated at 24 °C but improved at 0 and ‒70 °C, except for assays in the Salt and Acid soil solutions in which most cells were killed. Results suggest that Earth microorganisms that form spores may persist in liquid brines on Mars better than non-spore forming species, and thus, spore-forming species may pose a potential forward contamination risk to sites with liquid brines.

  16. Lead Optimization of Anti-Malarial Propafenone Analogs

    PubMed Central

    Lowes, David; Pradhan, Anupam; Iyer, Lalitha V.; Parman, Toufan; Gow, Jason; Zhu, Fangyi; Furimsky, Anna; Lemoff, Andrew; Guiguemde, W. Armand; Sigal, Martina; Clark, Julie A.; Wilson, Emily; Tang, Liang; Connelly, Michele C.; DeRisi, Joseph L.; Kyle, Dennis E.; Mirsalis, Jon; Guy, R. Kiplin

    2015-01-01

    Previously reported studies identified analogs of propafenone that had potent antimalarial activity, reduced cardiac ion channel activity, and properties that suggested the potential for clinical development for malaria. Careful examination of the bioavailability, pharmacokinetics, toxicology, and efficacy of this series of compounds using rodent models revealed orally bioavailable compounds that are non-toxic and suppress parasitemia in vivo. Although these compounds possess potential for further preclinical development, they also carry some significant challenges. PMID:22708838

  17. Digital plus analog output encoder

    NASA Technical Reports Server (NTRS)

    Hafle, R. S. (Inventor)

    1976-01-01

    The disclosed encoder is adapted to produce both digital and analog output signals corresponding to the angular position of a rotary shaft, or the position of any other movable member. The digital signals comprise a series of binary signals constituting a multidigit code word which defines the angular position of the shaft with a degree of resolution which depends upon the number of digits in the code word. The basic binary signals are produced by photocells actuated by a series of binary tracks on a code disc or member. The analog signals are in the form of a series of ramp signals which are related in length to the least significant bit of the digital code word. The analog signals are derived from sine and cosine tracks on the code disc.

  18. Analogy-Enhanced Instruction: Effects on Reasoning Skills in Science

    ERIC Educational Resources Information Center

    Remigio, Krisette B.; Yangco, Rosanelia T.; Espinosa, Allen A.

    2014-01-01

    The study examined the reasoning skills of first year high school students after learning general science concepts through analogies. Two intact heterogeneous sections were randomly assigned to Analogy-Enhanced Instruction (AEI) group and Non Analogy-Enhanced (NAEI) group. Various analogies were incorporated in the lessons of the AEI group for…

  19. Modeling Stochastic Energy and Water Consumption to Manage Residential Water Uses

    NASA Astrophysics Data System (ADS)

    Abdallah, A. M.; Rosenberg, D. E.; Water; Energy Conservation

    2011-12-01

    Water energy linkages have received growing attention from the water and energy utilities as utilities recognize that collaborative efforts can implement more effective conservation and efficiency improvement programs at lower cost with less effort. To date, limited energy-water household data has allowed only deterministic analysis for average, representative households and required coarse assumptions - like the water heater (the primary energy use in a home apart from heating and cooling) be a single end use. Here, we use recent available disaggregated hot and cold water household end-use data to estimate water and energy consumption for toilet, shower, faucet, dishwasher, laundry machine, leaks, and other household uses and savings from appliance retrofits. The disaggregated hot water and bulk water end-use data was previously collected by the USEPA for 96 single family households in Seattle WA and Oakland CA, and Tampa FL between the period from 2000 and 2003 for two weeks before and four weeks after each household was retrofitted with water efficient appliances. Using the disaggregated data, we developed a stochastic model that represents factors that influence water use for each appliance: behavioral (use frequency and duration), demographical (household size), and technological (use volume or flowrate). We also include stochastic factors that govern energy to heat hot water: hot water fraction (percentage of hot water volume to total water volume used in a certain end-use event), heater water intake and dispense temperatures, and energy source for the heater (gas, electric, etc). From the empirical household end-use data, we derive stochastic probability distributions for each water and energy factor where each distribution represents the range and likelihood of values that the factor may take. The uncertainty of the stochastic water and energy factors is propagated using Monte Carlo simulations to calculate the composite probability distribution for water

  20. Antarctic Mirabilite Mounds as Mars Analogs: The Lewis Cliffs Ice Tongue Revisited

    NASA Technical Reports Server (NTRS)

    Socki, Richard A.; Sun, Tao; Niles, Paul B.; Harvey, Ralph P.; Bish, David L.; Tonui, Eric

    2012-01-01

    It has been proposed, based on geomorphic and geochemical arguments, that subsurface water has played an important role in the history of water on the planet Mars [1]. Subsurface water, if present, could provide a protected and long lived environment for potential life. Discovery of gullies [2] and recurring slopes [3] on Mars suggest the potential for subsurface liquid water or brines. Recent attention has also focused on small (< approx. 1km dia.) mound-like geomorphic features discovered within the mid to high latitudes on the surface of Mars which may be caused by eruptions of subsurface fluids [4, 5]. We have identified massive but highly localized Na-sulfate deposits (mirabilite mounds, Na2SO4 .10H2O) that may be derived from subsurface fluids and may provide insight into the processes associated with subsurface fluids on Mars. The mounds are found on the end moraine of the Lewis Cliffs Ice Tongue (LCIT) [6] in the Transantarctic Mountains, Antarctica, and are potential terrestrial analogs for mounds observed on the martian surface. The following characteristics distinguish LCIT evaporite mounds from other evaporite mounds found in Antarctic coastal environments and/or the McMurdo Dry Valleys: (1) much greater distance from the open ocean (approx.500 km); (2) higher elevation (approx.2200 meters); and (3) colder average annual temperature (average annual temperature = -30 C for LCIT [7] vs. 20 C at sea level in the McMurdo region [8]. Furthermore, the recent detection of subsurface water ice (inferred as debris-covered glacial ice) by the Mars Reconnaissance Orbiter [9] supports the use of an Antarctic glacial environment, particularly with respect to the mirabilite deposits described in this work, as an ideal terrestrial analog for understanding the geochemistry associated with near-surface martian processes. S and O isotopic compositions.

  1. DockoMatic: automated peptide analog creation for high throughput virtual screening.

    PubMed

    Jacob, Reed B; Bullock, Casey W; Andersen, Tim; McDougal, Owen M

    2011-10-01

    The purpose of this manuscript is threefold: (1) to describe an update to DockoMatic that allows the user to generate cyclic peptide analog structure files based on protein database (pdb) files, (2) to test the accuracy of the peptide analog structure generation utility, and (3) to evaluate the high throughput capacity of DockoMatic. The DockoMatic graphical user interface interfaces with the software program Treepack to create user defined peptide analogs. To validate this approach, DockoMatic produced cyclic peptide analogs were tested for three-dimensional structure consistency and binding affinity against four experimentally determined peptide structure files available in the Research Collaboratory for Structural Bioinformatics database. The peptides used to evaluate this new functionality were alpha-conotoxins ImI, PnIA, and their published analogs. Peptide analogs were generated by DockoMatic and tested for their ability to bind to X-ray crystal structure models of the acetylcholine binding protein originating from Aplysia californica. The results, consisting of more than 300 simulations, demonstrate that DockoMatic predicts the binding energy of peptide structures to within 3.5 kcal mol(-1), and the orientation of bound ligand compares to within 1.8 Å root mean square deviation for ligand structures as compared to experimental data. Evaluation of high throughput virtual screening capacity demonstrated that Dockomatic can collect, evaluate, and summarize the output of 10,000 AutoDock jobs in less than 2 hours of computational time, while 100,000 jobs requires approximately 15 hours and 1,000,000 jobs is estimated to take up to a week. Copyright © 2011 Wiley Periodicals, Inc.

  2. A Systematic Evaluation of Analogs for the Read-across ...

    EPA Pesticide Factsheets

    Read-across is a data gap filling technique widely used within category and analog approaches to predict a biological property for a target data-poor chemical using known information from similar (source analog) chemical(s). Potential source analogs are typically identified based on structural similarity. Although much guidance has been published for read-across, practical guiding principles for the identification and evaluation of the scientific validity of source analogs, which is a critical step in deriving a robust read-across prediction, remains largely lacking.This case study explores the extent to which 3 structure descriptor sets (Pubchem, Chemotyper and MoSS) and their combinations are able to identify valid analogs for reading across Estrogen Receptor (ER) activity for a specific class of chemicals: hindered phenols. For each target chemical, two sets of analogs (hindered and non-hindered phenols) were selected using each descriptor set with two cut-offs: (1). Minimum Tanimoto similarity (range 0.1 - 0.9), and (2). Closest N analogs (range 1 - 10). Each target-analog pair was then evaluated for its agreement with measured ER binding and agonism. Subsequently, the analogs were filtered using physchem properties (LogKow & Molecular Volume) and the resultant agreement between each target-analog pair was evaluated. The data set comprised 462 hindered phenols and 296 non-hindered phenols. The results demonstrate that: (1). The concordance in ER activity r

  3. Methods and applications of electrical simulation in ground-water studies in the lower Arkansas and Verdigris River Valleys, Arkansas and Oklahoma

    USGS Publications Warehouse

    Bedinger, M.S.; Reed, J.E.; Wells, C.J.; Swafford, B.F.

    1970-01-01

    The Arkansas River Multiple-Purpose Plan will provide year-round navigation on the Arkansas River from near its mouth to Muskogee, Okla., and on the Verdigris River from Muskogee to Catoosa, Okla. The altered regimen in the Arkansas and Verdigris Rivers will affect ground-water conditions in the adjacent alluvial aquifers. In 1957 the U.S. Geological Survey and U.S. Army Corps of Engineers entered into a cooperative agreement for a comprehensive ground-water study of the lower Arkansas and Verdigris River valleys. At the request of the Corps of Engineers, the Geological Survey agreed to provide (1) basic ground-water data before, during, and after construction of the Multiple-Purpose Plan and (2) interpretation and projections of postconstruction ground-water conditions. The data collected were used by the Corps of Engineers in preliminary foundation and excavation estimates and by the Geological Survey as the basis for defining the hydrologic properties of, and the ground-water conditions in, the aquifer. The projections of postconstruction ground-water conditions were used by the Corps of Engineers in the planning, design, construction, and operation of the Multiple-Purpose Plan. Analysis and projections of ground-water conditions were made by use of electrical analog models. These models use the analogy between the flow of electricity in a resistance-capacitance circuit and the flow of a liquid in a porous and permeable medium. Verification provides a test of the validity of the analog to perform as the aquifer would, within the range of historic forces. The verification process consists of simulating the action of historic forces which have acted upon the aquifer and of duplicating the aquifer response with the analog. The areal distribution of accretion can be treated as an unknown and can be determined by analog simulation of the piezometric surface in an aquifer. Comparison of accretion with depth to piezometric surface below land surface shows that

  4. Tagging Water Sources in Atmospheric Models

    NASA Technical Reports Server (NTRS)

    Bosilovich, M.

    2003-01-01

    Tagging of water sources in atmospheric models allows for quantitative diagnostics of how water is transported from its source region to its sink region. In this presentation, we review how this methodology is applied to global atmospheric models. We will present several applications of the methodology. In one example, the regional sources of water for the North American Monsoon system are evaluated by tagging the surface evaporation. In another example, the tagged water is used to quantify the global water cycling rate and residence time. We will also discuss the need for more research and the importance of these diagnostics in water cycle studies.

  5. An Augmented Two-Layer Model Captures Nonlinear Analog Spatial Integration Effects in Pyramidal Neuron Dendrites.

    PubMed

    Jadi, Monika P; Behabadi, Bardia F; Poleg-Polsky, Alon; Schiller, Jackie; Mel, Bartlett W

    2014-05-01

    In pursuit of the goal to understand and eventually reproduce the diverse functions of the brain, a key challenge lies in reverse engineering the peculiar biology-based "technology" that underlies the brain's remarkable ability to process and store information. The basic building block of the nervous system is the nerve cell, or "neuron," yet after more than 100 years of neurophysiological study and 60 years of modeling, the information processing functions of individual neurons, and the parameters that allow them to engage in so many different types of computation (sensory, motor, mnemonic, executive, etc.) remain poorly understood. In this paper, we review both historical and recent findings that have led to our current understanding of the analog spatial processing capabilities of dendrites, the major input structures of neurons, with a focus on the principal cell type of the neocortex and hippocampus, the pyramidal neuron (PN). We encapsulate our current understanding of PN dendritic integration in an abstract layered model whose spatially sensitive branch-subunits compute multidimensional sigmoidal functions. Unlike the 1-D sigmoids found in conventional neural network models, multidimensional sigmoids allow the cell to implement a rich spectrum of nonlinear modulation effects directly within their dendritic trees.

  6. Better Insight Into Water Resources Management With Integrated Hydrodynamic And Water Quality Models

    NASA Astrophysics Data System (ADS)

    Debele, B.; Srinivasan, R.; Parlange, J.

    2004-12-01

    Models have long been used in water resources management to guide decision making and improve understanding of the system. Numerous models of different scales -spatial and temporal - are available. Yet, very few models manage to bridge simulations of hydrological and water quality parameters from both upland watershed and riverine system. Most water quality models, such as QUAL2E and EPD-RIV1 concentrate on the riverine system while CE-QUAL-W2 and WASP models focus on larger waterbodies, such as lakes and reservoirs. On the other hand, the original SWAT model, HSPF and other upland watershed hydrological models simulate agricultural (diffuse) pollution sources with limited number of processes incorporated to handle point source pollutions that emanate from industrial sectors. Such limitations, which are common in most hydrodynamic and water quality models undermine better understanding that otherwise could be uncovered by employing integrated hydrological and water quality models for both upland watershed and riverine system. The SWAT model is a well documented and verified hydrological and water quality model that has been developed to simulate the effects of various management scenarios on the health of the environment in terms of water quantity and quality. Recently, the SWAT model has been extended to include the simulation of hydrodynamic and water quality parameters in the river system. The extended SWAT model (ESWAT) has been further extended to run using diurnally varying (hourly) weather data and produce outputs at hourly timescales. This and other improvements in the ESWAT model have been documented in the current work. Besides, the results from two case studies in Texas will be reported.

  7. An NMR strategy to detect conformational differences in a protein complexed with highly analogous inhibitors in solution.

    PubMed

    Persons, John D; Khan, Shahid N; Ishima, Rieko

    2018-04-12

    This manuscript presents an NMR strategy to investigate conformational differences in protein-inhibitor complexes, when the inhibitors tightly bind to a protein at sub-nanomolar dissociation constants and are highly analogous to each other. Using HIV-1 protease (PR), we previously evaluated amide chemical shift differences, ΔCSPs, of PR bound to darunavir (DRV) compared to PR bound to several DRV analogue inhibitors, to investigate subtle but significant long-distance conformation changes caused by the inhibitor's chemical moiety variation [Khan, S. N., Persons, J. D. Paulsen, J. L., Guerrero, M., Schiffer, C. A., Kurt-Yilmaz, N., and Ishima, R., Biochemistry, (2018), 57, 1652-1662]. However, ΔCSPs are not ideal for investigating subtle PR-inhibitor interface differences because intrinsic differences in the electron shielding of the inhibitors affect protein ΔCSPs. NMR relaxation is also not suitable as it is not sensitive enough to detect small conformational differences in rigid regions among similar PR-inhibitor complexes. Thus, to gain insight into conformational differences at the inhibitor-protein interface, we recorded 15 N-half filtered NOESY spectra of PR bound to two highly analogous inhibitors and assessed NOEs between PR amide protons and inhibitor protons, between PR amide protons and hydroxyl side chains, and between PR amide protons and water protons. We also verified the PR amide-water NOEs using 2D water-NOE/ROE experiments. Differences in water-amide proton NOE peaks, possibly due to amide-protein hydrogen bonds, were observed between subunit A and subunit B, and between the DRV-bound form and an analogous inhibitor-bound form, which may contribute to remote conformational changes. Copyright © 2018 Elsevier Inc. All rights reserved.

  8. In vitro blood-brain barrier permeability predictions for GABAA receptor modulating piperine analogs.

    PubMed

    Eigenmann, Daniela Elisabeth; Dürig, Carmen; Jähne, Evelyn Andrea; Smieško, Martin; Culot, Maxime; Gosselet, Fabien; Cecchelli, Romeo; Helms, Hans Christian Cederberg; Brodin, Birger; Wimmer, Laurin; Mihovilovic, Marko D; Hamburger, Matthias; Oufir, Mouhssin

    2016-06-01

    The alkaloid piperine from black pepper (Piper nigrum L.) and several synthetic piperine analogs were recently identified as positive allosteric modulators of γ-aminobutyric acid type A (GABAA) receptors. In order to reach their target sites of action, these compounds need to enter the brain by crossing the blood-brain barrier (BBB). We here evaluated piperine and five selected analogs (SCT-66, SCT-64, SCT-29, LAU397, and LAU399) regarding their BBB permeability. Data were obtained in three in vitro BBB models, namely a recently established human model with immortalized hBMEC cells, a human brain-like endothelial cells (BLEC) model, and a primary animal (bovine endothelial/rat astrocytes co-culture) model. For each compound, quantitative UHPLC-MS/MS methods in the range of 5.00-500ng/mL in the corresponding matrix were developed, and permeability coefficients in the three BBB models were determined. In vitro predictions from the two human BBB models were in good agreement, while permeability data from the animal model differed to some extent, possibly due to protein binding of the screened compounds. In all three BBB models, piperine and SCT-64 displayed the highest BBB permeation potential. This was corroborated by data from in silico prediction. For the other piperine analogs (SCT-66, SCT-29, LAU397, and LAU399), BBB permeability was low to moderate in the two human BBB models, and moderate to high in the animal BBB model. Efflux ratios (ER) calculated from bidirectional permeability experiments indicated that the compounds were likely not substrates of active efflux transporters. Copyright © 2016 Elsevier B.V. All rights reserved.

  9. How the creative use of analogies can shape medical practice.

    PubMed

    Prasad, G V Ramesh

    2015-06-01

    Analogical reasoning is central to medical progress, and is either creative or conservative. According to Hofmann et al., conservative analogy relates concepts from old technology to new technologies with emphasis on preservation of comprehension and conduct. Creative analogy however brings new understanding to new technology, brings similarities existing in the source domain to a target domain where they previously had no bearing, and imports something entirely different from the content of the analogy itself. I defend the claim that while conservative analogies are useful by virtue of being comfortable to use from familiarity and experience, and are more easily accepted by society, they only lead to incremental advances in medicine. However, creative analogies are more exciting and productive because they generate previously unexpected associations across widely separated domains, emphasize relations over physical similarities, and structure over superficiality. I use kidney transplantation and anti-rejection medication development as an exemplar of analogical reasoning used to improve medical practice. Anti-rejection medication has not helped highly sensitized patients because of their propensity to rejecting most organs. I outline how conservative analogical reasoning led to anti-rejection medication development, but creative analogical reasoning helped highly sensitized and blood type incompatible patients through domino transplants, by which they obtain a kidney to which they are not sensitized. Creative analogical reasoning is more likely than conservative analogical reasoning to lead to revolutionary progress. While these analogies overlap and creative analogies eventually become conservative, progress is best facilitated by combining conservative and creative analogical reasoning. © 2015 John Wiley & Sons, Ltd.

  10. A Mathematical Model for Alternation of Polygamy and Parthenogenesis: Stability Versus Efficiency and Analogy with Parasitism.

    PubMed

    Sanchez-Palencia, Evariste; Lherminier, Philippe; Françoise, Jean-Pierre

    2016-12-01

    The present work is a contribution to the understanding of the sempiternal problem of the "burden of factor two" implied by sexual reproduction versus asexual one, as males are energy consumers not contributing to the production of offspring. We construct a deterministic mathematical model in population dynamics where a species enjoys both sexual and parthenogenetic capabilities of reproduction and lives on a limited resource. We then show how polygamy implies instability of a parthenogenetic population with a small number of sexually born males. This instability implies evolution of the system towards an attractor involving both (sexual and asexual) populations (which does not imply optimality of the population). We also exhibit the analogy with a parasite/host system.

  11. A novel water poverty index model for evaluation of Chinese regional water security

    NASA Astrophysics Data System (ADS)

    Gong, L.; Jin, C. L.; Li, Y. X.; Zhou, Z. L.

    2017-08-01

    This study proposed an improved Water Poverty Index (WPI) model employed in evaluating Chinese regional water security. Firstly, the Chinese WPI index system was constructed, in which the indicators were obtained according to China River reality. A new mathematical model was then established for WPI values calculation on the basis of Center for Ecology and Hydrology (CEH) model. Furthermore, this new model was applied in Shiyanghe River (located in western China). It turned out that the Chinese index system could clearly reflect the indicators threatening security of river water and the Chinese WPI model is feasible. This work has also developed a Water Security Degree (WSD) standard which is able to be regarded as a scientific basis for further water resources utilization and water security warning mechanism formulation.

  12. Dimensional analysis, similarity, analogy, and the simulation theory

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Davis, A.A.

    1978-01-01

    Dimensional analysis, similarity, analogy, and cybernetics are shown to be four consecutive steps in application of the simulation theory. This paper introduces the classes of phenomena which follow the same formal mathematical equations as models of the natural laws and the interior sphere of restraints groups of phenomena in which one can introduce simplfied nondimensional mathematical equations. The simulation by similarity in a specific field of physics, by analogy in two or more different fields of physics, and by cybernetics in nature in two or more fields of mathematics, physics, biology, economics, politics, sociology, etc., appears as a unique theorymore » which permits one to transport the results of experiments from the models, convenably selected to meet the conditions of researches, constructions, and measurements in the laboratories to the originals which are the primary objectives of the researches. Some interesting conclusions which cannot be avoided in the use of simplified nondimensional mathematical equations as models of natural laws are presented. Interesting limitations on the use of simulation theory based on assumed simplifications are recognized. This paper shows as necessary, in scientific research, that one write mathematical models of general laws which will be applied to nature in its entirety. The paper proposes the extent of the second law of thermodynamics as the generalized law of entropy to model life and its activities. This paper shows that the physical studies and philosophical interpretations of phenomena and natural laws cannot be separated in scientific work; they are interconnected and one cannot be put above the others.« less

  13. Quantitative structure-activity relationship studies of threo-methylphenidate analogs.

    PubMed

    Misra, Milind; Shi, Qing; Ye, Xiaocong; Gruszecka-Kowalik, Ewa; Bu, Wei; Liu, Zhanzhu; Schweri, Margaret M; Deutsch, Howard M; Venanzi, Carol A

    2010-10-15

    Complementary two-dimensional (2D) and three-dimensional (3D) Quantitative Structure-Activity Relationship (QSAR) techniques were used to derive a preliminary model for the dopamine transporter (DAT) binding affinity of 80 racemic threo-methylphenidate (MP) analogs. A novel approach based on using the atom-level E-state indices of the 14 common scaffold atoms in a sphere exclusion protocol was used to identify a test set for 2D- and 3D-QSAR model validation. Comparative Molecular Field Analysis (CoMFA) contour maps based on the structure-activity data of the training set indicate that the 2' position of the phenyl ring cannot tolerate much steric bulk and that addition of electron-withdrawing groups to the 3' or 4' positions of the phenyl ring leads to improved DAT binding affinity. In particular, the optimal substituents were found to be those whose bulk is mainly in the plane of the phenyl ring. Substituents with significant bulk above or below the plane of the ring led to decreased binding affinity. Suggested alterations to be explored in the design of new compounds are the placement at the 3' and 4' position of the phenyl ring of electron-withdrawing groups that lie chiefly in the plane of the ring, for example, halogen substituents on the 3',4'-benzo analog, 79. A complementary 2D-QSAR approach-partial least squares analysis using a reduced set of Molconn-Z descriptors-supports the CoMFA structure-activity interpretation that phenyl ring substitution is a major determinant of DAT binding affinity. The potential usefulness of the CoMFA models was demonstrated by the prediction of the binding affinity of methyl 2-(naphthalen-1-yl)-2-(piperidin-2-yl)acetate, an analog not in the original data set, to be in good agreement with the experimental value. Copyright © 2010 Elsevier Ltd. All rights reserved.

  14. Water quality modelling of Jadro spring.

    PubMed

    Margeta, J; Fistanic, I

    2004-01-01

    Management of water quality in karst is a specific problem. Water generally moves very fast by infiltration processes but far more by concentrated flows through fissures and openings in karst. This enables the entire surface pollution to be transferred fast and without filtration into groundwater springs. A typical example is the Jadro spring. Changes in water quality at the spring are sudden, but short. Turbidity as a major water quality problem for the karst springs regularly exceeds allowable standards. Former practice in problem solving has been reduced to intensive water disinfection in periods of great turbidity without analyses of disinfection by-products risks for water users. The main prerequisite for water quality control and an optimization of water disinfection is the knowledge of raw water quality and nature of occurrence. The analysis of monitoring data and their functional relationship with hydrological parameters enables establishment of a stochastic model that will help obtain better information on turbidity in different periods of the year. Using the model a great number of average monthly and extreme daily values are generated. By statistical analyses of these data possibility of occurrence of high turbidity in certain months is obtained. This information can be used for designing expert system for water quality management of karst springs. Thus, the time series model becomes a valuable tool in management of drinking water quality of the Jadro spring.

  15. Modeling crop water productivity using a coupled SWAT-MODSIM model

    USDA-ARS?s Scientific Manuscript database

    This study examines the water productivity of irrigated wheat and maize yields in Karkheh River Basin (KRB) in the semi-arid region of Iran using a coupled modeling approach consisting of the hydrological model (SWAT) and the river basin water allocation model (MODSIM). Dynamic irrigation requireme...

  16. Integrating water data, models and forecasts - the Australian Water Resources Information System (Invited)

    NASA Astrophysics Data System (ADS)

    Argent, R.; Sheahan, P.; Plummer, N.

    2010-12-01

    Under the Commonwealth Water Act 2007 the Bureau of Meteorology was given a new national role in water information, encompassing standards, water accounts and assessments, hydrological forecasting, and collecting, enhancing and making freely available Australia’s water information. The Australian Water Resources Information System (AWRIS) is being developed to fulfil part of this role, by providing foundational data, information and model structures and services. Over 250 organisations across Australia are required to provide water data and metadata to the Bureau, including federal, state and local governments, water storage management and hydroelectricity companies, rural and urban water utilities, and catchment management bodies. The data coverage includes the categories needed to assess and account for water resources at a range of scales. These categories are surface, groundwater and meteorological observations, water in storages, water restrictions, urban and irrigation water use and flows, information on rights, allocations and trades, and a limited suite of water quality parameters. These data are currently supplied to the Bureau via a file-based delivery system at various frequencies from annual to daily or finer, and contain observations taken at periods from minutes to monthly or coarser. One of the primary keys to better data access and utilisation is better data organisation, including content and markup standards. As a significant step on the path to standards for water data description, the Bureau has developed a Water Data Transfer Format (WDTF) for transmission of a variety of water data categories, including site metadata. WDTF is adapted from the OGC’s observation and sampling-features standard. The WDTF XML schema is compatible with the OGC's Web Feature Service (WFS) interchange standard, and conforms to GML Simple Features profile (GML-SF) level 1, emphasising the importance of standards in data exchange. In the longer term we are also

  17. PHOTOCHEMICAL MODELING APPLIED TO NATURAL WATERS

    EPA Science Inventory

    The study examines the application of modeling photochemical processes in natural water systems. For many photochemical reactions occurring in natural waters, a simple photochemical model describing reaction rate as a function of intensity, radiation attenuation, reactant absorpt...

  18. Biomonitoring of human exposures to chlorinated derivatives and structural analogs of bisphenol A.

    PubMed

    Andra, Syam S; Charisiadis, Pantelis; Arora, Manish; van Vliet-Ostaptchouk, Jana V; Makris, Konstantinos C

    2015-12-01

    The high reactivity of bisphenol A (BPA) with disinfectant chlorine is evident in the instantaneous formation of chlorinated BPA derivatives (ClxBPA) in various environmental media that show increased estrogen-activity when compared with that of BPA. The documented health risks associated with BPA exposures have led to the gradual market entry of BPA structural analogs, such as bisphenol S (BPS), bisphenol F (BPF), bisphenol B (BPB), etc. A suite of exposure sources to ClxBPA and BPA analogs in the domestic environment is anticipated to drive the nature and range of halogenated BPA derivatives that can form when residual BPA comes in contact with disinfectant in tap water and/or consumer products. The primary objective of this review was to survey all available studies reporting biomonitoring protocols of ClxBPA and structural BPA analogs (BPS, BPF, BPB, etc.) in human matrices. Focus was paid on describing the analytical methodologies practiced for the analysis of ClxBPA and BPA analogs using hyphenated chromatography and mass spectrometry techniques, because current methodologies for human matrices are complex. During the last decade, an increasing number of ecotoxicological, cell-culture and animal-based and human studies dealing with ClxBPA exposure sources and routes of exposure, metabolism and toxicity have been published. Up to date findings indicated the association of ClxBPA with metabolic conditions, such as obesity, lipid accumulation, and type 2 diabetes mellitus, particularly in in-vitro and in-vivo studies. We critically discuss the limitations, research needs and future opportunities linked with the inclusion of ClxBPA and BPA analogs into exposure assessment protocols of relevant epidemiological studies. Copyright © 2015 Elsevier Ltd. All rights reserved.

  19. Multi-model groundwater-management optimization: reconciling disparate conceptual models

    NASA Astrophysics Data System (ADS)

    Timani, Bassel; Peralta, Richard

    2015-09-01

    Disagreement among policymakers often involves policy issues and differences between the decision makers' implicit utility functions. Significant disagreement can also exist concerning conceptual models of the physical system. Disagreement on the validity of a single simulation model delays discussion on policy issues and prevents the adoption of consensus management strategies. For such a contentious situation, the proposed multi-conceptual model optimization (MCMO) can help stakeholders reach a compromise strategy. MCMO computes mathematically optimal strategies that simultaneously satisfy analogous constraints and bounds in multiple numerical models that differ in boundary conditions, hydrogeologic stratigraphy, and discretization. Shadow prices and trade-offs guide the process of refining the first MCMO-developed `multi-model strategy into a realistic compromise management strategy. By employing automated cycling, MCMO is practical for linear and nonlinear aquifer systems. In this reconnaissance study, MCMO application to the multilayer Cache Valley (Utah and Idaho, USA) river-aquifer system employs two simulation models with analogous background conditions but different vertical discretization and boundary conditions. The objective is to maximize additional safe pumping (beyond current pumping), subject to constraints on groundwater head and seepage from the aquifer to surface waters. MCMO application reveals that in order to protect the local ecosystem, increased groundwater pumping can satisfy only 40 % of projected water demand increase. To explore the possibility of increasing that pumping while protecting the ecosystem, MCMO clearly identifies localities requiring additional field data. MCMO is applicable to other areas and optimization problems than used here. Steps to prepare comparable sub-models for MCMO use are area-dependent.

  20. Ratchet baryogenesis and an analogy with the forced pendulum

    NASA Astrophysics Data System (ADS)

    Bamba, Kazuharu; Barrie, Neil D.; Sugamoto, Akio; Takeuchi, Tatsu; Yamashita, Kimiko

    2018-06-01

    A new scenario of baryogenesis via the ratchet mechanism is proposed based on an analogy with the forced pendulum. The oscillation of the inflaton field during the reheating epoch after inflation plays the role of the driving force, while the phase 𝜃 of a scalar baryon field (a complex scalar field with baryon number) plays the role of the angle of the pendulum. When the inflaton is coupled to the scalar baryon, the behavior of the phase 𝜃 can be analogous to that of the angle of the forced pendulum. If the oscillation of the driving force is adjusted to the pendulum’s motion, a directed rotation of the pendulum is obtained with a nonvanishing value of 𝜃˙, which models successful baryogenesis since 𝜃˙ is proportional to the baryon number density. Similar ratchet models which lead to directed motion have been used in the study of molecular motors in biology. There, the driving force is supplied by chemical reactions, while in our scenario this role is played by the inflaton during the reheating epoch.

  1. Modeling of Water Injection into a Vacuum

    NASA Technical Reports Server (NTRS)

    Alred, John W.; Smith, Nicole L.; Wang, K. C.; Lumpkin, Forrest E.; Fitzgerald, Steven M.

    1997-01-01

    A loosely coupled two-phase vacuum water plume model has been developed. This model consists of a source flow model to describe the expansion of water vapor, and the Lagrangian equations of motion for particle trajectories. Gas/Particle interaction is modeled through the drag force induced by the relative velocities. Particles are assumed traveling along streamlines. The equations of motion are integrated to obtain particle velocity along the streamline. This model has been used to predict the mass flux in a 5 meter radius hemispherical domain resulting from the burst of a water jet of 1.5 mm in diameter, mass flow rate of 24.2 g/s, and stagnation pressure of 21.0 psia, which is the nominal Orbiter water dump condition. The result is compared with an empirical water plume model deduced from a video image of the STS-29 water dump. To further improve the model, work has begun to numerically simulate the bubble formation and bursting present in a liquid stream injected into a vacuum. The technique of smoothed particle hydrodynamics was used to formulate this simulation. A status and results of the on-going effort are presented and compared to results from the literature.

  2. Analog Techniques in CEBAF's RF Control System

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hovater, J.; Fugitt, Jock

    1988-01-01

    Recent developments in high-speed analog technology have progressed into the areas of traditional RF technology.Diode-related devices are being replaced by analog IC's in the CEBAF RF control system.Complex phase modulators and attenuators have been successfully tested at 70 MHz.They have three advantages over existing technology: lower cost, less temperature sensitivity, and more linearity.RF signal conditioning components and how to implement the new analog IC's will be covered in this paper.

  3. CRC handbook of neurohypophyseal hormone analogs. Volume 2

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jost, K.; Lebl, M.; Brtnik, F.

    1987-01-01

    This book is discussed in two parts. The Part 1 discusses the: Prohormones and Hormonogens of Neuro-hypophyseal Hormones, Analogs with Inhibitory properties. Analogs with Dissociated and/or High activities. Introduction. Uterotonic Activity. Galactogogic Activity. Pressor Activity. Antidiuretic Activity. References. Part 2 discusses the Other Important Activities. CNS Activities. Corticotropin- and ..beta..-Entriuretic Action. Natriferic Action. References. Practical Use in Human and Veterinary Medicine. Introduction. Methyloxytocin. Deamino-Oxytocin. Cargutocin. Glypressin. Octapressin. Desmopressin. Analogs Clinically Tried But Not Introduced into Production and Routine Clinical Practice. References. Tables of Analogs and Index.

  4. Insights on the energy-water nexus through modeling of the integrated water cycle

    NASA Astrophysics Data System (ADS)

    Leung, L. R.; Li, H. Y.; Zhang, X.; Wan, W.; Voisin, N.; Leng, G.

    2016-12-01

    For sustainable energy planning, understanding the impacts of climate change, land use change, and water management is essential as they all exert notable controls on streamflow and stream temperature that influence energy production. An integrated water model representing river processes, irrigation water use and water management has been developed and coupled to a land surface model to investigate the energy-water nexus. Simulations driven by two climate change projections with the RCP 4.5 and RCP 8.5 emissions scenarios, with and without water management, are analyzed to evaluate the individual and combined effects of climate change and water management on streamflow and stream temperature. The simulations revealed important impacts of climate change and water management on both floods and droughts. The simulations also revealed the dynamics of competition between changes in water demand and water availability in the climate mitigation (RCP 4.5) and business as usual (RCP 8.5) scenarios that influence streamflow and stream temperature, with important consequences to energy production. The integrated water model is being implemented to the Accelerated Climate Modeling for Energy (ACME) to enable investigation of the energy-water nexus in the fully coupled Earth system.

  5. Analogical Matrices in Young Children and Students with Intellectual Disability: Reasoning by Analogy or Reasoning by Association?

    ERIC Educational Resources Information Center

    Denaes, Caroline

    2012-01-01

    Background: Analogical reasoning (AR) is renowned for being a complex activity. Young children tend to reason by association, rather by analogy, and people with intellectual disability present problems of memorization. Both these populations usually show low performances in AR. The present author investigated whether familiar material and external…

  6. Integrating Economic Models with Biophysical Models in the Willamette Water 2100 Project

    NASA Astrophysics Data System (ADS)

    Jaeger, W. K.; Plantinga, A.

    2013-12-01

    This paper highlights the human system modeling components for Willamette Water 2100, a comprehensive, highly integrated study of hydrological, ecological, and human factors affecting water scarcity in the Willamette River Basin (WRB). The project is developing a spatiotemporal simulation model to predict future trajectories of water scarcity, and to evaluate mitigation policies. Economic models of land use and water use are the main human system models in WW2100. Water scarcity depends on both supply and demand for water, and varies greatly across time and space (Jaeger et al., 2013). Thus, the locations of human water use can have enormous influence on where and when water is used, and hence where water scarcity may arise. Modeling the locations of human uses of water (e.g., urban versus agricultural) as well as human values and choices, are the principal quantitative ways that social science can contribute to research of this kind. Our models are empirically-based models of human resource allocation. Each model reflects private behavior (choices by households, farms, firms), institutions (property rights, laws, markets, regulations), public infrastructure (dams, canals, highways), and also 'external drivers' that influence the local economy (migration, population growth, national markets and policies). This paper describes the main model components, emphasizing similarities between human and biophysical components of the overall project, and the model's linkages and feedbacks relevant to our predictions of changes in water scarcity between now and 2100. Results presented include new insights from individual model components as well as available results from the integrated system model. Issues include water scarcity and water quality (temperature) for out-of-stream and instream uses, the impact of urban expansion on water use and potential flood damage. Changes in timing and variability of spring discharge with climate change, as well as changes in human uses of

  7. Comparison of protocols for measuring and calculating postmortem submersion intervals for human analogs in fresh water.

    PubMed

    Humphreys, Michael K; Panacek, Edward; Green, William; Albers, Elizabeth

    2013-03-01

    Protocols for determining postmortem submersion interval (PMSI) have long been problematic for forensic investigators due to the wide variety of factors affecting the rate of decomposition of submerged carrion. Likewise, it has been equally problematic for researchers to develop standardized experimental protocols to monitor underwater decomposition without artificially affecting the decomposition rate. This study compares two experimental protocols: (i) underwater in situ evaluation with photographic documentation utilizing the Heaton et al. total aquatic decomposition (TAD) score and (ii) weighing the carrion before and after submersion. Complete forensic necropsies were performed as a control. Perinatal piglets were used as human analogs. The results of this study indicate that in order to objectively measure decomposition over time, the human analog should be examined at depth using the TAD scoring system rather than utilizing a carrion weight evaluation. The acquired TAD score can be used to calculate an approximate PMSI. © 2012 American Academy of Forensic Sciences.

  8. BacNet and Analog/Digital Interfaces of the Building Controls Virtual Testbed

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nouidui, Thierry Stephane; Wetter, Michael; Li, Zhengwei

    2011-11-01

    This paper gives an overview of recent developments in the Building Controls Virtual Test Bed (BCVTB), a framework for co-simulation and hardware-in-the-loop. First, a general overview of the BCVTB is presented. Second, we describe the BACnet interface, a link which has been implemented to couple BACnet devices to the BCVTB. We present a case study where the interface was used to couple a whole building simulation program to a building control system to assess in real-time the performance of a real building. Third, we present the ADInterfaceMCC, an analog/digital interface that allows a USB-based analog/digital converter to be linked tomore » the BCVTB. In a case study, we show how the link was used to couple the analog/digital converter to a building simulation model for local loop control.« less

  9. Analog models of convergence and divergence: perspectives of the tectonics of the Middle East

    NASA Astrophysics Data System (ADS)

    Mart, Yossi

    2010-05-01

    Three series of analog models of convergence and divergence of tectonic plates illuminate the possible tectonic processes that shaped the lithology of the Middle East since the early Miocene. The Mid-East geographic province extends from the Ionian Sea to the Arabian Sea, and comprises the Hellenic subduction zone, the Aegean back-arc basin, the motion of Anatolia southwestwards, the oblique collision of Arabia and Iran along the Zagros suture, and the continental break-up of the Gulf of Aden and the Red Sea. The tectonic evolution of all these diverse domains started in the Miocene nearly contemporaneously, and modeling suggests that the convergence and divergence, though derived from unrelated processes, their tectonics is intertwined. Centrifuge models of the initiation of subduction show the correlation between early subduction and the opening of its back-arc basin (Mart et al., 2005). The models emphasize the significance of extensive seawards roll-back of the deformation front when friction between the thrust slabs is reduced, and consequently, the pull within the overthrust slab that leads to its structural extension. That extension produced the Aegean domain with its volcanism and the exposure of its core complex, as well as the westwards displacement of Anatolia along the North and East Anatolian Faults. Sand-box models of oblique subduction, namely the gradual shift from subduction to collision along the convergence front, showed orthogonal patterns of extension in distal parts of the underthrust slab (Bellahsen et al., 2002). It is suggested that the extensional domains deflected the propagation of Carlsberg Ridge to swing 1200 and penetrate the Gulf of Aden in the early Miocene. The structural differences between the Gulf of Aden and the Red Sea can be accounted for by the results of sand-box experiments in oblique rifting (Mart and Dauteuil, 2000). The models suggest that oblique rifting, where the deviation from the normal extension was ca. 50, would

  10. Revisiting the anisotropy of metamaterials for water waves

    NASA Astrophysics Data System (ADS)

    Maurel, A.; Marigo, J.-J.; Cobelli, P.; Petitjeans, P.; Pagneux, V.

    2017-10-01

    We establish, both theoretically and experimentally, that metamaterials for water waves reach a much higher degree of anisotropy than the one predicted using the analogy between water waves and their electromagnetic or acoustic counterparts. This is due to the fact that this analogy, based on the two-dimensional shallow water approximation, is unable to account for the three-dimensional near field effects in the water depth. To properly capture these effects, we homogenize the fully three-dimensional problem and show that a subwavelength layered structuration of the bathymetry produces significant anisotropic parameters in the shallow water regime. Furthermore, we extend the validity of the homogenized prediction by proposing an empirical anisotropic version of the dispersion relation.

  11. MoGIRE: A Model for Integrated Water Management

    NASA Astrophysics Data System (ADS)

    Reynaud, A.; Leenhardt, D.

    2008-12-01

    Climate change and growing water needs have resulted in many parts of the world in water scarcity problems that must by managed by public authorities. Hence, policy-makers are more and more often asked to define and to implement water allocation rules between competitive users. This requires to develop new tools aiming at designing those rules for various scenarios of context (climatic, agronomic, economic). If models have been developed for each type of water use however, very few integrated frameworks link these different uses, while such an integrated approach is a relevant stake for designing regional water and land policies. The lack of such integrated models can be explained by the difficulty of integrating models developed by very different disciplines and by the problem of scale change (collecting data on large area, arbitrate between the computational tractability of models and their level of aggregation). However, modelers are more and more asked to deal with large basin scales while analyzing some policy impacts at very high detailed levels. These contradicting objectives require to develop new modeling tools. The CALVIN economically-driven optimization model developed for managing water in California is a good example of this type of framework, Draper et al. (2003). Recent reviews of the literature on integrated water management at the basin level include Letcher et al. (2007) or Cai (2008). We present here an original framework for integrated water management at the river basin scale called MoGIRE ("Modèle pour la Gestion Intégrée de la Ressource en Eau"). It is intended to optimize water use at the river basin level and to evaluate scenarios (agronomic, climatic or economic) for a better planning of agricultural and non-agricultural water use. MoGIRE includes a nodal representation of the water network. Agricultural, urban and environmental water uses are also represented using mathematical programming and econometric approaches. The model then

  12. Water accounting for stressed river basins based on water resources management models.

    PubMed

    Pedro-Monzonís, María; Solera, Abel; Ferrer, Javier; Andreu, Joaquín; Estrela, Teodoro

    2016-09-15

    Water planning and the Integrated Water Resources Management (IWRM) represent the best way to help decision makers to identify and choose the most adequate alternatives among other possible ones. The System of Environmental-Economic Accounting for Water (SEEA-W) is displayed as a tool for the building of water balances in a river basin, providing a standard approach to achieve comparability of the results between different territories. The target of this paper is to present the building up of a tool that enables the combined use of hydrological models and water resources models to fill in the SEEA-W tables. At every step of the modelling chain, we are capable to build the asset accounts and the physical water supply and use tables according to SEEA-W approach along with an estimation of the water services costs. The case study is the Jucar River Basin District (RBD), located in the eastern part of the Iberian Peninsula in Spain which as in other many Mediterranean basins is currently water-stressed. To guide this work we have used PATRICAL model in combination with AQUATOOL Decision Support System (DSS). The results indicate that for the average year the total use of water in the district amounts to 15,143hm(3)/year, being the Total Water Renewable Water Resources 3909hm(3)/year. On the other hand, the water service costs in Jucar RBD amounts to 1634 million € per year at constant 2012 prices. It is noteworthy that 9% of these costs correspond to non-conventional resources, such as desalinated water, reused water and water transferred from other regions. Copyright © 2016 Elsevier B.V. All rights reserved.

  13. Functional DNA: Teaching Infinite Series through Genetic Analogy

    ERIC Educational Resources Information Center

    Kowalski, R. Travis

    2011-01-01

    This article presents an extended analogy that connects infinite sequences and series to the science of genetics, by identifying power series as "DNA for a function." This analogy allows standard topics such as convergence tests or Taylor approximations to be recast in a "forensic" light as mathematical analogs of genetic concepts such as DNA…

  14. Synthesis and spectral characterization of environmentally responsive fluorescent deoxycytidine analogs

    PubMed Central

    Elmehriki, Adam AH; Suchý, Mojmír; Chicas, Kirby J; Wojciechowski, Filip; Hudson, Robert HE

    2014-01-01

    Herein, we describe the synthesis and spectroscopic properties of five novel pyrrolodeoxycytidine analogs, and the related 5-(1-pyrenylethynyl)-2’-deoxycytidine analog; as well as fluorescence characterization of 5-(p-methoxyphenylethynyl)-2’-deoxyuridine. Within this series of compounds, rigidification of the structure from 6-phenylpyrrolodeoxycytidine to 5,6-benzopyrroldeoxycytidine made remarkable improvement of the fluorescence quantum yield (Φ ~1, EtOH) and substantially increased the Stokes shift. Exchange of the phenyl group of 6-phenylpyrrolodeoxycytidine for other heterocycles (benzofuryl or indolyl) produced an increase in the extinction coefficient at the excitation wavelength while preserving high quantum yields. The steady-state fluorescence response to the environment was determined by sensitivity of Stokes shift to solvent polarity. The effect of solvent polarity on fluorescence emission intensity was concurrently examined and showed that 5,6-benzopyrrolodeoxycytidine is highly sensitive to the presence of water. On the other hand, the previously synthesized 5-(p-methoxyphenylethynyl)-2’-deoxyuridine was found to be sensitive to solvent viscosity indicating molecular rotor behavior. PMID:25483932

  15. The Mojave Desert: A Martian Analog Site for Future Astrobiology Themed Missions

    NASA Technical Reports Server (NTRS)

    Salas, E.; Abbey, W.; Bhartia, R.; Beegle, L. W.

    2011-01-01

    Astrobiological interest in Mars is highlighted by evidence that Mars was once warm enough to have liquid water present on its surface long enough to create geologic formations that could only exist in the presense of extended fluvial periods. These periods existed at the same time life on Earth arose. If life began on Mars as well during this period, it is reasonable to assume it may have adapted to the subsurface as environments at the surface changed into the inhospitable state we find today. If the next series of Mars missions (Mars Science Laboratory, the ExoMars Trace Gas Orbiter proposed for launch in 2016, and potential near surface sample return) fail to discover either extinct or extant life on Mars, a subsurface mission would be necessary to attempt to "close the book" on the existence of martian life. Mars is much colder and drier than Earth, with a very low pressure CO2 environment and no obvious habitats. Terrestrial regions with limited precipitation, and hence reduced active biota, are some of the best martian low to mid latitude analogs to be found on Earth, be they the Antarctic dry valleys, the Atacama or Mojave Deserts. The Mojave Desert/Death Valley region is considered a Mars analog site by the Terrestrial Analogs Panel of the NSF-sponsored decadal survey; a field guide was even developed and a workshop was held on its applicability as a Mars analog. This region has received a great deal of attention due to its accessibility and the variety of landforms and processes observed relevant to martian studies.

  16. Comparison of two models of a double inlet miniature pulse tube refrigerator: Part B electrical analogy

    NASA Astrophysics Data System (ADS)

    Bailly, Yannick; Nika, Philippe

    2002-10-01

    The design of a double inlet pulse tube refrigerator is investigated by means of an analogy with an electric circuit. The results obtained are compared with both those of the thermodynamic model (Part A) and experiments. The basic formulation of equivalent electronic components is discussed and a few improvements are proposed for adjusting the theoretical expressions of the electric impedance concerning the capillaries and the regenerator. Then additional effects such as pressure drops due to geometrical singularities are taken into account considering the different internal flow regimes that may occur. Besides a simplified formulation for the regenerator efficiency is deduced from considerations on its harmonic functioning. In this analysis, the emphasis concerns principally the design of miniature cryocoolers dedicated to electronic applications. Those models are applied to a commercial miniature refrigerator. A discussion of their relevance is achieved and a few suggestions on the refrigerator design are proposed in order to improve the cooling production.

  17. Manning’s equation and two-dimensional flow analogs

    NASA Astrophysics Data System (ADS)

    Hromadka, T. V., II; Whitley, R. J.; Jordan, N.; Meyer, T.

    2010-07-01

    SummaryTwo-dimensional (2D) flow models based on the well-known governing 2D flow equations are applied to floodplain analysis purposes. These 2D models numerically solve the governing flow equations simultaneously or explicitly on a discretization of the floodplain using grid tiles or similar tile cell geometry, called "elements". By use of automated information systems such as digital terrain modeling, digital elevation models, and GIS, large-scale topographic floodplain maps can be readily discretized into thousands of elements that densely cover the floodplain in an edge-to-edge form. However, the assumed principal flow directions of the flow model analog, as applied across an array of elements, typically do not align with the floodplain flow streamlines. This paper examines the mathematical underpinnings of a four-direction flow analog using an array of square elements with respect to floodplain flow streamlines that are not in alignment with the analog's principal flow directions. It is determined that application of Manning's equation to estimate the friction slope terms of the governing flow equations, in directions that are not coincident with the flow streamlines, may introduce a bias in modeling results, in the form of slight underestimation of flow depths. It is also determined that the maximum theoretical bias, occurs when a single square element is rotated by about 13°, and not 45° as would be intuitively thought. The bias as a function of rotation angle for an array of square elements follows approximately the bias for a single square element. For both the theoretical single square element and an array of square elements, the bias as a function of alignment angle follows a relatively constant value from about 5° to about 85°, centered at about 45°. This bias was first noted about a decade prior to the present paper, and the magnitude of this bias was estimated then to be about 20% at about 10° misalignment. An adjustment of Manning's n is

  18. Fatty acid analogs

    DOEpatents

    Elmaleh, David R.; Livni, Eli

    1985-01-01

    In one aspect, a radioactively labeled analog of a fatty acid which is capable of being taken up by mammalian tissue and which exhibits an in vivo beta-oxidation rate below that with a corresponding radioactively labeled fatty acid.

  19. Modeling surface-water flow and sediment mobility with the Multi-Dimensional Surface-Water Modeling System (MD_SWMS)

    USGS Publications Warehouse

    McDonald, Richard; Nelson, Jonathan; Kinzel, Paul; Conaway, Jeffrey S.

    2006-01-01

    The Multi-Dimensional Surface-Water Modeling System (MD_SWMS) is a Graphical User Interface for surface-water flow and sediment-transport models. The capabilities of MD_SWMS for developing models include: importing raw topography and other ancillary data; building the numerical grid and defining initial and boundary conditions; running simulations; visualizing results; and comparing results with measured data.

  20. Are ship tracks useful analogs for studying the aerosol indirect effect?

    NASA Astrophysics Data System (ADS)

    Christensen, M.; Toll, V.; Stephens, G. L.

    2017-12-01

    Vessels transiting the ocean sometimes leave their mark on the clouds - leaving behind reflective cloud lines, known as ship tracks. Ship tracks have been looked upon by some as a possible Rosetta Stone connecting the effects of changing aerosol over the ocean and cloud albedo effects on climate (Porch et al. 1990, Atmos. Enviorn., 1051-1059). In this research, we establish whether ship tracks, and volcano tracks - a natural analog, can be used to relate these cloud-scale perturbations to the aerosol effects occurring at larger regional-scales. Two databases containing over 1,500 ship and 900 volcano tracks, all carefully hand-selected from satellite imagery, are utilized; showing that ship tracks exhibit very similar cloud albedo effect responses to that of volcano tracks. For comparison, our global dataset utilises over 7 million CloudSat profiles consisting of single-layer marine warm cloud in which the retrievals are co-located with the MODerate Imaging Spectroradiometer (MODIS) product so that statistical relationships between aerosol and cloud can be computed over 4x4 degree regions. All datasets show the same key physical processes that govern the cloud-aerosol indirect effect, namely, the strong negative responses in cloud droplet size and the bidirectional responses in liquid water path and cloud albedo depending on the meteorological conditions. Finally, this analysis is extended to a comparison against several general circulation models where it is suggested that key processes such as cloud-top entrainment and evaporation that regulates against strong liquid water path responses are likely underrepresented in most models.

  1. Evaluating Water Conservation and Reuse Policies Using a Dynamic Water Balance Model

    NASA Astrophysics Data System (ADS)

    Qaiser, Kamal; Ahmad, Sajjad; Johnson, Walter; Batista, Jacimaria R.

    2013-02-01

    A dynamic water balance model is created to examine the effects of different water conservation policies and recycled water use on water demand and supply in a region faced with water shortages and significant population growth, the Las Vegas Valley (LVV). The model, developed using system dynamics approach, includes an unusual component of the water system, return flow credits, where credits are accrued for returning treated wastewater to the water supply source. In LVV, Lake Mead serves as, both the drinking water source and the receiving body for treated wastewater. LVV has a consumptive use allocation from Lake Mead but return flow credits allow the water agency to pull out additional water equal to the amount returned as treated wastewater. This backdrop results in a scenario in which conservation may cause a decline in the available water supply. Current water use in LVV is 945 lpcd (250 gpcd), which the water agency aims to reduce to 752 lpcd (199 gpcd) by 2035, mainly through water conservation. Different conservation policies focused on indoor and outdoor water use, along with different population growth scenarios, are modeled for their effects on the water demand and supply. Major contribution of this study is in highlighting the importance of outdoor water conservation and the effectiveness of reducing population growth rate in addressing the future water shortages. The water agency target to decrease consumption, if met completely through outdoor conservation, coupled with lower population growth rate, can potentially satisfy the Valley's water demands through 2035.

  2. Evaluating water conservation and reuse policies using a dynamic water balance model.

    PubMed

    Qaiser, Kamal; Ahmad, Sajjad; Johnson, Walter; Batista, Jacimaria R

    2013-02-01

    A dynamic water balance model is created to examine the effects of different water conservation policies and recycled water use on water demand and supply in a region faced with water shortages and significant population growth, the Las Vegas Valley (LVV). The model, developed using system dynamics approach, includes an unusual component of the water system, return flow credits, where credits are accrued for returning treated wastewater to the water supply source. In LVV, Lake Mead serves as, both the drinking water source and the receiving body for treated wastewater. LVV has a consumptive use allocation from Lake Mead but return flow credits allow the water agency to pull out additional water equal to the amount returned as treated wastewater. This backdrop results in a scenario in which conservation may cause a decline in the available water supply. Current water use in LVV is 945 lpcd (250 gpcd), which the water agency aims to reduce to 752 lpcd (199 gpcd) by 2035, mainly through water conservation. Different conservation policies focused on indoor and outdoor water use, along with different population growth scenarios, are modeled for their effects on the water demand and supply. Major contribution of this study is in highlighting the importance of outdoor water conservation and the effectiveness of reducing population growth rate in addressing the future water shortages. The water agency target to decrease consumption, if met completely through outdoor conservation, coupled with lower population growth rate, can potentially satisfy the Valley's water demands through 2035.

  3. Re-Shuffling of Species with Climate Disruption: A No-Analog Future for California Birds?

    PubMed Central

    Stralberg, Diana; Jongsomjit, Dennis; Howell, Christine A.; Snyder, Mark A.; Alexander, John D.; Wiens, John A.; Root, Terry L.

    2009-01-01

    By facilitating independent shifts in species' distributions, climate disruption may result in the rapid development of novel species assemblages that challenge the capacity of species to co-exist and adapt. We used a multivariate approach borrowed from paleoecology to quantify the potential change in California terrestrial breeding bird communities based on current and future species-distribution models for 60 focal species. Projections of future no-analog communities based on two climate models and two species-distribution-model algorithms indicate that by 2070 over half of California could be occupied by novel assemblages of bird species, implying the potential for dramatic community reshuffling and altered patterns of species interactions. The expected percentage of no-analog bird communities was dependent on the community scale examined, but consistent geographic patterns indicated several locations that are particularly likely to host novel bird communities in the future. These no-analog areas did not always coincide with areas of greatest projected species turnover. Efforts to conserve and manage biodiversity could be substantially improved by considering not just future changes in the distribution of individual species, but including the potential for unprecedented changes in community composition and unanticipated consequences of novel species assemblages. PMID:19724641

  4. A management and optimisation model for water supply planning in water deficit areas

    NASA Astrophysics Data System (ADS)

    Molinos-Senante, María; Hernández-Sancho, Francesc; Mocholí-Arce, Manuel; Sala-Garrido, Ramón

    2014-07-01

    The integrated water resources management approach has proven to be a suitable option for efficient, equitable and sustainable water management. In water-poor regions experiencing acute and/or chronic shortages, optimisation techniques are a useful tool for supporting the decision process of water allocation. In order to maximise the value of water use, an optimisation model was developed which involves multiple supply sources (conventional and non-conventional) and multiple users. Penalties, representing monetary losses in the event of an unfulfilled water demand, have been incorporated into the objective function. This model represents a novel approach which considers water distribution efficiency and the physical connections between water supply and demand points. Subsequent empirical testing using data from a Spanish Mediterranean river basin demonstrated the usefulness of the global optimisation model to solve existing water imbalances at the river basin level.

  5. A CCD Monolithic LMS Adaptive Analog Signal Processor Integrated Circuit.

    DTIC Science & Technology

    1980-03-01

    adaptive filter with electrically- reprogrammable MOS analog conductance weights. I The analog and digital peripheral MOS on-chip circuits are provided with...electrically reprogrammable analog weights at tap positions along a CCD analog delay line in order to form a basic linear combiner for adaptive filtering...electrically reprogrammable analog conductance weights was introduced with the use of non-volatile MNOS memory 6-7 transistors biased in their triode

  6. Ground-water models as a management tool in Florida

    USGS Publications Warehouse

    Hutchinson, C.B.

    1984-01-01

    Highly sophisticated computer models provide powerful tools for analyzing historic data and for simulating future water levels, water movement, and water chemistry under stressed conditions throughout the ground-water system in Florida. Models that simulate the movement of heat and subsidence of land in response to aquifer pumping also have potential for application to hydrologic problems in the State. Florida, with 20 ground-water modeling studies reported since 1972, has applied computer modeling techniques to a variety of water-resources problems. Models in Florida generally have been used to provide insight to problems of water supply, contamination, and impact on the environment. The model applications range from site-specific studies, such as estimating contamination by wastewater injection at St. Petersburg, to a regional model of the entire State that may be used to assess broad-scale environmental impact of water-resources development. Recently, groundwater models have been used as management tools by the State regulatory authority to permit or deny development of water resources. As modeling precision, knowledge, and confidence increase, the use of ground-water models will shift more and more toward regulation of development and enforcement of environmental laws. (USGS)

  7. National Water Model: Providing the Nation with Actionable Water Intelligence

    NASA Astrophysics Data System (ADS)

    Aggett, G. R.; Bates, B.

    2017-12-01

    The National Water Model (NWM) provides national, street-level detail of water movement through time and space. Operating hourly, this flood of information offers enormous benefits in the form of water resource management, natural disaster preparedness, and the protection of life and property. The Geo-Intelligence Division at the NOAA National Water Center supplies forecasters and decision-makers with timely, actionable water intelligence through the processing of billions of NWM data points every hour. These datasets include current streamflow estimates, short and medium range streamflow forecasts, and many other ancillary datasets. The sheer amount of NWM data produced yields a dataset too large to allow for direct human comprehension. As such, it is necessary to undergo model data post-processing, filtering, and data ingestion by visualization web apps that make use of cartographic techniques to bring attention to the areas of highest urgency. This poster illustrates NWM output post-processing and cartographic visualization techniques being developed and employed by the Geo-Intelligence Division at the NOAA National Water Center to provide national actionable water intelligence.

  8. ANALOG-TO-DIGITAL DATA CONVERTER

    DOEpatents

    Rodgers, G.W.; Althouse, J.E.; Anderson, D.P.; Bussey, G.R.; Minnear, L.H.

    1960-09-01

    Electrical apparatus is described, particularly useful in telemetry work, for converting analog signals into electrical pulses and recording them. An electronic editor commands the taking of signal readings at a frequency which varies according to linearity of the analog signal being converted. Readings of information signals are recorded, along with time base readings and serial numbering, if desired, on magnetic tape and the latter may be used to operate a computer or the like. Magnetic tape data may be transferred to punched cards.

  9. Cyclopentanoid analogs of phosphatidylcholine: susceptibility to phospholipase A2.

    PubMed

    Lister, M D; Hancock, A J

    1988-10-01

    Six isomers of dipalmitoylcyclopentanetriol phosphocholine (cyclopentano-lecithin) were tested as potential substrates for phospholipase A2. Since each of these analogs possesses a configuration that mimics a narrow range of conformations of a glycerophospholipid molecule, the analogs were used to assess the enzyme's conformational requirements. Studies showed that all of the analogs containing the phosphocholine at the C-1 (or C-3) position could be hydrolyzed, while only one of the three analogs that contains the polar head group at the C-2 position was susceptible. Kinetic studies, however, revealed that only the all-trans-(1,3/2-1P)-cyclopentano-lecithin gave initial rates of hydrolysis that were measurable by pH-stat. Acyl group specificity of the enzyme towards the all-trans isomer was determined with an analog was acyl groups were distinguishable. The synthesis of this mixed-acid-cyclopentano-PC is described herein. When this analog was enzymatically assayed, results unequivocally showed the enzyme to be specific for C-2 acyl hydrolysis. This specificity, and data showing that the all-trans analog is stereospecifically hydrolyzed, indicate that it is acted on in an analogous manner to dipalmitoylphosphatidylcholine. These studies indicate that although the configuration of the analog is not necessarily a prerequisite for hydrolysis, there does appear to be an optimal spatial orientation for enzymatic activity. The analogy between the susceptibilities of all-trans-(1,3/2-1P)-cyclopentano-lecithin and glycero-lecithin suggests that the conformation of the glycero-lecithin during phospholipase A2-mediated hydrolysis may be best simulated by the all-trans orientation of C-O bonds in the artificial substrate.

  10. Modelling soil-water dynamics in the rootzone of structured and water-repellent soils

    NASA Astrophysics Data System (ADS)

    Brown, Hamish; Carrick, Sam; Müller, Karin; Thomas, Steve; Sharp, Joanna; Cichota, Rogerio; Holzworth, Dean; Clothier, Brent

    2018-04-01

    In modelling the hydrology of Earth's critical zone, there are two major challenges. The first is to understand and model the processes of infiltration, runoff, redistribution and root-water uptake in structured soils that exhibit preferential flows through macropore networks. The other challenge is to parametrise and model the impact of ephemeral hydrophobicity of water-repellent soils. Here we have developed a soil-water model, which is based on physical principles, yet possesses simple functionality to enable easier parameterisation, so as to predict soil-water dynamics in structured soils displaying time-varying degrees of hydrophobicity. Our model, WEIRDO (Water Evapotranspiration Infiltration Redistribution Drainage runOff), has been developed in the APSIM Next Generation platform (Agricultural Production Systems sIMulation). The model operates on an hourly time-step. The repository for this open-source code is https://github.com/APSIMInitiative/ApsimX. We have carried out sensitivity tests to show how WEIRDO predicts infiltration, drainage, redistribution, transpiration and soil-water evaporation for three distinctly different soil textures displaying differing hydraulic properties. These three soils were drawn from the UNSODA (Unsaturated SOil hydraulic Database) soils database of the United States Department of Agriculture (USDA). We show how preferential flow process and hydrophobicity determine the spatio-temporal pattern of soil-water dynamics. Finally, we have validated WEIRDO by comparing its predictions against three years of soil-water content measurements made under an irrigated alfalfa (Medicago sativa L.) trial. The results provide validation of the model's ability to simulate soil-water dynamics in structured soils.

  11. Modeling Benthic Sediment Processes to Predict Water ...

    EPA Pesticide Factsheets

    The benthic sediment acts as a huge reservoir of particulate and dissolved material (within interstitial water) which can contribute to loading of contaminants and nutrients to the water column. A benthic sediment model is presented in this report to predict spatial and temporal benthic fluxes of nutrients and chemicals in Narragansett Bay. A benthic sediment model is presented in this report to identify benthic flux into the water column in Narragansett Bay. Benthic flux is essential to properly model water quality and ecology in estuarine and coastal systems.

  12. Analogy, higher order thinking, and education.

    PubMed

    Richland, Lindsey Engle; Simms, Nina

    2015-01-01

    Analogical reasoning, the ability to understand phenomena as systems of structured relationships that can be aligned, compared, and mapped together, plays a fundamental role in the technology rich, increasingly globalized educational climate of the 21st century. Flexible, conceptual thinking is prioritized in this view of education, and schools are emphasizing 'higher order thinking', rather than memorization of a cannon of key topics. The lack of a cognitively grounded definition for higher order thinking, however, has led to a field of research and practice with little coherence across domains or connection to the large body of cognitive science research on thinking. We review literature on analogy and disciplinary higher order thinking to propose that relational reasoning can be productively considered the cognitive underpinning of higher order thinking. We highlight the utility of this framework for developing insights into practice through a review of mathematics, science, and history educational contexts. In these disciplines, analogy is essential to developing expert-like disciplinary knowledge in which concepts are understood to be systems of relationships that can be connected and flexibly manipulated. At the same time, analogies in education require explicit support to ensure that learners notice the relevance of relational thinking, have adequate processing resources available to mentally hold and manipulate relations, and are able to recognize both the similarities and differences when drawing analogies between systems of relationships. © 2015 John Wiley & Sons, Ltd.

  13. Analog hardware implementation of neocognitron networks

    NASA Astrophysics Data System (ADS)

    Inigo, Rafael M.; Bonde, Allen, Jr.; Holcombe, Bradford

    1990-08-01

    This paper deals with the analog implementation of neocognitron based neural networks. All of Fukushima''s and related work on the neocognitron is based on digital computer simulations. To fully take advantage of the power of this network paradigm an analog electronic approach is proposed. We first implemented a 6-by-6 sensor network with discrete analog components and fixed weights. The network was given weight values to recognize the characters U L and F. These characters are recognized regardless of their location on the sensor and with various levels of distortion and noise. The network performance has also shown an excellent correlation with software simulation results. Next we implemented a variable weight network which can be trained to recognize simple patterns by means of self-organization. The adaptable weights were implemented with PETs configured as voltage-controlled resistors. To implement a variable weight there must be some type of " memory" to store the weight value and hold it while the value is reinforced or incremented. Two methods were evaluated: an analog sample-hold circuit and a digital storage scheme using binary counters. The latter is preferable for VLSI implementation because it uses standard components and does not require the use of capacitors. The analog design and implementation of these small-scale networks demonstrates the feasibility of implementing more complicated ANNs in electronic hardware. The circuits developed can also be designed for VLSI implementation. 1.

  14. Evaluation of water security in Jordan using a multi-agent, hydroeconomic model: Initial model results from the Jordan Water Project

    NASA Astrophysics Data System (ADS)

    Yoon, J.; Klassert, C. J. A.; Lachaut, T.; Selby, P. D.; Knox, S.; Gorelick, S.; Rajsekhar, D.; Tilmant, A.; Avisse, N.; Harou, J. J.; Medellin-Azuara, J.; Gawel, E.; Klauer, B.; Mustafa, D.; Talozi, S.; Sigel, K.; Zhang, H.

    2016-12-01

    Our work focuses on development of a multi-agent, hydroeconomic model for water policy evaluation in Jordan. Jordan ranks among the most water-scarce countries in the world, a situation exacerbated due to a recent influx of refugees escaping the ongoing civil war in neighboring Syria. The modular, multi-agent model is used to evaluate interventions for enhancing Jordan's water security, integrating biophysical modules that simulate natural and engineered phenomena with human modules that represent behavior at multiple levels of decision making. The hydrologic modules are developed using spatially-distributed groundwater and surface water models, which are translated into compact simulators for efficient integration into the multi-agent model. For the multi-agent model, we explicitly account for human agency at multiple levels of decision making, with agents representing riparian, management, supplier, and water user groups. Human agents are implemented as autonomous entities in the model that make decisions in relation to one another and in response to hydrologic and socioeconomic conditions. The integrated model is programmed in Python using Pynsim, a generalizable, open-source object-oriented software framework for modeling network-based water resource systems. The modeling time periods include historical (2006-2014) and future (present-2050) time spans. For the historical runs, the model performance is validated against historical data for several observations that reflect the interacting dynamics of both the hydrologic and human components of the system. A historical counterfactual scenario is also constructed to isolate and identify the impacts of the recent Syrian civil war and refugee crisis on Jordan's water system. For the future period, model runs are conducted to evaluate potential supply, demand, and institutional interventions over a wide range of plausible climate and socioeconomic scenarios. In addition, model sensitivity analysis is conducted

  15. Chromomycin SA analogs from a marine-derived Streptomyces sp.

    PubMed Central

    Hu, Youcai; Espindola, Ana Paula D. M; Stewart, Nathan A.; Wei, Shuguang; Posner, Bruce A.; MacMillan, John B.

    2011-01-01

    Two chromomycin SA analogs, chromomycin SA3 and chromomycin SA2, along with deacetylchromomycin A3 and five previously reported chromomycin analogs were isolated from a marine-derived Streptomyces sp. The structures of the new compounds were determined by spectroscopic methods including 1D and 2D NMR techniques, HRMS and chemical methods. Chromomycin SA3 and chromomycin SA2 are the first naturally occuring chromomycin analogs with truncated side-chains. Biological evaluation of chromomycin analogs for cytotoxicity against two non-small cell lung cancer (NSCLC) cell-lines, A549 and HCC44, demonstrated a decrease in cytotoxicity for the truncated sides chain chromomycin analogs. PMID:21807523

  16. Simple Electronic Analog of a Josephson Junction.

    ERIC Educational Resources Information Center

    Henry, R. W.; And Others

    1981-01-01

    Demonstrates that an electronic Josephson junction analog constructed from three integrated circuits plus an external reference oscillator can exhibit many of the circuit phenomena of a real Josephson junction. Includes computer and other applications of the analog. (Author/SK)

  17. Dynamic morphology of gas hydrate on a methane bubble in water: Observations and new insights for hydrate film models

    NASA Astrophysics Data System (ADS)

    Warzinski, Robert P.; Lynn, Ronald; Haljasmaa, Igor; Leifer, Ira; Shaffer, Frank; Anderson, Brian J.; Levine, Jonathan S.

    2014-10-01

    Predicting the fate of subsea hydrocarbon gases escaping into seawater is complicated by potential formation of hydrate on rising bubbles that can enhance their survival in the water column, allowing gas to reach shallower depths and the atmosphere. The precise nature and influence of hydrate coatings on bubble hydrodynamics and dissolution is largely unknown. Here we present high-definition, experimental observations of complex surficial mechanisms governing methane bubble hydrate formation and dissociation during transit of a simulated oceanic water column that reveal a temporal progression of deep-sea controlling mechanisms. Synergistic feedbacks between bubble hydrodynamics, hydrate morphology, and coverage characteristics were discovered. Morphological changes on the bubble surface appear analogous to macroscale, sea ice processes, presenting new mechanistic insights. An inverse linear relationship between hydrate coverage and bubble dissolution rate is indicated. Understanding and incorporating these phenomena into bubble and bubble plume models will be necessary to accurately predict global greenhouse gas budgets for warming ocean scenarios and hydrocarbon transport from anthropogenic or natural deep-sea eruptions.

  18. Modeling from Local to Subsystem Level Effects in Analog and Digital Circuits Due to Space Induced Single Event Transients

    NASA Technical Reports Server (NTRS)

    Perez, Reinaldo J.

    2011-01-01

    Single Event Transients in analog and digital electronics from space generated high energetic nuclear particles can disrupt either temporarily and sometimes permanently the functionality and performance of electronics in space vehicles. This work first provides some insights into the modeling of SET in electronic circuits that can be used in SPICE-like simulators. The work is then directed to present methodologies, one of which was developed by this author, for the assessment of SET at different levels of integration in electronics, from the circuit level to the subsystem level.

  19. Arguing by analogy in the fetal tissue debate.

    PubMed

    Gillam, Lynn

    1997-10-01

    In the debate over fetal tissue use, an analogy is often drawn between removing organs from the body of a person who has been murdered to use for transplantation, and collecting tissue from an aborted fetus to use for the same purpose. The murder victim analogy is taken by its proponents to show that even if abortion is the moral equivalent of murder, there is still no good reason to refrain from using the fetal tissue, since as a society we do not see any problem about using organs from murder victims. However, I argue that the analogy between murder victims and aborted fetuses does not hold -- the two situations are not the same in all morally relevant respects. Thus the murder victim analogy does not provide an argument in favour of fetal tissue transplant. In conclusion, I point to some of the potential pitfalls of using analogies in ethical argument.

  20. An Augmented Two-Layer Model Captures Nonlinear Analog Spatial Integration Effects in Pyramidal Neuron Dendrites

    PubMed Central

    JADI, MONIKA P.; BEHABADI, BARDIA F.; POLEG-POLSKY, ALON; SCHILLER, JACKIE; MEL, BARTLETT W.

    2014-01-01

    In pursuit of the goal to understand and eventually reproduce the diverse functions of the brain, a key challenge lies in reverse engineering the peculiar biology-based “technology” that underlies the brain’s remarkable ability to process and store information. The basic building block of the nervous system is the nerve cell, or “neuron,” yet after more than 100 years of neurophysiological study and 60 years of modeling, the information processing functions of individual neurons, and the parameters that allow them to engage in so many different types of computation (sensory, motor, mnemonic, executive, etc.) remain poorly understood. In this paper, we review both historical and recent findings that have led to our current understanding of the analog spatial processing capabilities of dendrites, the major input structures of neurons, with a focus on the principal cell type of the neocortex and hippocampus, the pyramidal neuron (PN). We encapsulate our current understanding of PN dendritic integration in an abstract layered model whose spatially sensitive branch-subunits compute multidimensional sigmoidal functions. Unlike the 1-D sigmoids found in conventional neural network models, multidimensional sigmoids allow the cell to implement a rich spectrum of nonlinear modulation effects directly within their dendritic trees. PMID:25554708

  1. Solid-state-based analog of optomechanics

    DOE PAGES

    Naumann, Nicolas L.; Droenner, Leon; Carmele, Alexander; ...

    2016-09-01

    In this study, we investigate a semiconductor quantum dot as a microscopic analog of a basic optomechanical setup. We show that optomechanical features can be reproduced by the solid-state platform, arising from parallels of the underlying interaction processes, which in the optomechanical case is the radiation pressure coupling and in the semiconductor case the electron–phonon coupling. We discuss bistabilities, lasing, and phonon damping, and recover the same qualitative behaviors for the semiconductor and the optomechanical cases expected for low driving strengths. However, in contrast to the optomechanical case, distinct signatures of higher order processes arise in the semiconductor model.

  2. Modelling water uptake efficiency of root systems

    NASA Astrophysics Data System (ADS)

    Leitner, Daniel; Tron, Stefania; Schröder, Natalie; Bodner, Gernot; Javaux, Mathieu; Vanderborght, Jan; Vereecken, Harry; Schnepf, Andrea

    2016-04-01

    Water uptake is crucial for plant productivity. Trait based breeding for more water efficient crops will enable a sustainable agricultural management under specific pedoclimatic conditions, and can increase drought resistance of plants. Mathematical modelling can be used to find suitable root system traits for better water uptake efficiency defined as amount of water taken up per unit of root biomass. This approach requires large simulation times and large number of simulation runs, since we test different root systems under different pedoclimatic conditions. In this work, we model water movement by the 1-dimensional Richards equation with the soil hydraulic properties described according to the van Genuchten model. Climatic conditions serve as the upper boundary condition. The root system grows during the simulation period and water uptake is calculated via a sink term (after Tron et al. 2015). The goal of this work is to compare different free software tools based on different numerical schemes to solve the model. We compare implementations using DUMUX (based on finite volumes), Hydrus 1D (based on finite elements), and a Matlab implementation of Van Dam, J. C., & Feddes 2000 (based on finite differences). We analyse the methods for accuracy, speed and flexibility. Using this model case study, we can clearly show the impact of various root system traits on water uptake efficiency. Furthermore, we can quantify frequent simplifications that are introduced in the modelling step like considering a static root system instead of a growing one, or considering a sink term based on root density instead of considering the full root hydraulic model (Javaux et al. 2008). References Tron, S., Bodner, G., Laio, F., Ridolfi, L., & Leitner, D. (2015). Can diversity in root architecture explain plant water use efficiency? A modeling study. Ecological modelling, 312, 200-210. Van Dam, J. C., & Feddes, R. A. (2000). Numerical simulation of infiltration, evaporation and shallow

  3. A double-panel active segmented partition module using decoupled analog feedback controllers: numerical model.

    PubMed

    Sagers, Jason D; Leishman, Timothy W; Blotter, Jonathan D

    2009-06-01

    Low-frequency sound transmission has long plagued the sound isolation performance of lightweight partitions. Over the past 2 decades, researchers have investigated actively controlled structures to prevent sound transmission from a source space into a receiving space. An approach using active segmented partitions (ASPs) seeks to improve low-frequency sound isolation capabilities. An ASP is a partition which has been mechanically and acoustically segmented into a number of small individually controlled modules. This paper provides a theoretical and numerical development of a single ASP module configuration, wherein each panel of the double-panel structure is independently actuated and controlled by an analog feedback controller. A numerical model is developed to estimate frequency response functions for the purpose of controller design, to understand the effects of acoustic coupling between the panels, to predict the transmission loss of the module in both passive and active states, and to demonstrate that the proposed ASP module will produce bidirectional sound isolation.

  4. Mars Analog Mission: Glacier Simulation AMADEE-15 by Austrian Space Forum

    NASA Astrophysics Data System (ADS)

    Groemer, Gernot; Losiak, Anna; Soucek, Alexander; Plank, Clemens; Zanardini, Laura; Sejkora, Nina; Sams, Sebastian

    2016-04-01

    Austrian Space Forum: The Austrian Space Forum (OeWF, Österreichisches Weltraum Forum) is a non-profit, citizen-science organization of aerospace specialists and enthusiasts. One of its specialisations is Mars analog research. Analog studies and analog instrument validation supported all planetary surface missions so far [1] and are considered as an effective tool to prepare for future missions to Mars [2,3,4,5,6,7]. Since 2006, OeWF has conducted 11 Mars analog field campaigns in diverse locations that represented: 1) average current Mars conditions (the Mars Desert Research Station (MDRS) in Utah in 2006 [8] and the Northern Sahara near Erfoud, Morocco in 2013 [9]); 2) the early and wet Mars (analog site of Rio Tinto Spain in 2011 [10]); and 3) subsurface exploration (Dachstein Ice Caves in 2012). During these campaigns, 68 experiments and major engineering tests were performed, whichwere mostly focused on astrobiology, robotics, human factors, geoscience and spacesuit operations. Major assets of OeWF include two advanced spacesuit simulators Aouda [11], an increasingly evolving Mission Support Center, a dedicated Remote Science Support team [12], and a growing set of Standard Operating Procedures defining major workflows within a mission team. The spacesuit simulators were operated by a total of 18 analog astronauts, who were selected and trained during a >6 month program. Total EVA time is nearly 600 hours, leading to a significant experience in analog field simulations. AMADEE-15: The mission took place between August 2nd and 14th 2015 at the Kaunertal Glacier in Tyrol, Austria. This glacier was selected as a study site because of its accessibility and high number of micro-landscapes analogous to those expected on Mars in locations where abundant water ice is present. As such it is considered a first-tier Mars analog [13]. The Base station was located at N 46.86320, E 10.71401 at 2800 masl, the highest reached location was on elevation of 2887 m. Eleven

  5. Modeling U.S. water resources under climate change

    NASA Astrophysics Data System (ADS)

    Blanc, Elodie; Strzepek, Kenneth; Schlosser, Adam; Jacoby, Henry; Gueneau, Arthur; Fant, Charles; Rausch, Sebastian; Reilly, John

    2014-04-01

    Water is at the center of a complex and dynamic system involving climatic, biological, hydrological, physical, and human interactions. We demonstrate a new modeling system that integrates climatic and hydrological determinants of water supply with economic and biological drivers of sectoral and regional water requirement while taking into account constraints of engineered water storage and transport systems. This modeling system is an extension of the Massachusetts Institute of Technology (MIT) Integrated Global System Model framework and is unique in its consistent treatment of factors affecting water resources and water requirements. Irrigation demand, for example, is driven by the same climatic conditions that drive evapotranspiration in natural systems and runoff, and future scenarios of water demand for power plant cooling are consistent with energy scenarios driving climate change. To illustrate the modeling system we select "wet" and "dry" patterns of precipitation for the United States from general circulation models used in the Climate Model Intercomparison Project (CMIP3). Results suggest that population and economic growth alone would increase water stress in the United States through mid-century. Climate change generally increases water stress with the largest increases in the Southwest. By identifying areas of potential stress in the absence of specific adaptation responses, the modeling system can help direct attention to water planning that might then limit use or add storage in potentially stressed regions, while illustrating how avoiding climate change through mitigation could change likely outcomes.

  6. Digitally Controlled Analog Signal Processing

    DTIC Science & Technology

    1988-04-01

    each analog switch. The third is the parasiti - capacitance at the output (the capacitor side) of each analog switch. This last is of concern only when a...21) where fk (x) tf H(wk) -H(wk) for k = 1, 2,... n, and x denotes the vector containing n-+ I transfer function coefficients, a, a2 ,... am, and bl...b2, .... bt that are non-zero. We wish to solve this system of equations for x, the vector of unknown transfer function coefficients. The modified

  7. Binary/Analog CCD Correlator Development.

    DTIC Science & Technology

    1981-07-01

    architecture , design and performance of a general purpose, 1,024-stage, programmable transversal filter implemented in CCD/NMOS technology is described. The device features programmability of the reference signal, the filter length and weighting coefficient resolution. Off-ship circuitry is minimized by incorporating both analog and digital support circuitry, on-chip. This results in a monolithic analog signal processing system that has the flexibility to be operated in nine programmable configurations, from 1,024-stages by 1-bit, to 128-stages by 8-bits. The versatility

  8. Analogical Reasoning: What Develops? A Review of Research and Theory.

    ERIC Educational Resources Information Center

    Goswami, Usha

    1991-01-01

    Children's analogical reasoning has traditionally been measured by classical four-term analogy tasks or problem-solving tasks. Current theories of analogical development and the evidence on which they are based are reviewed. It is concluded that structural views of analogical development are wrong, and knowledge-based accounts of what develops are…

  9. Immunomodulatory effects of thalidomide analogs on LPS-induced plasma and hepatic cytokines in the rat.

    PubMed

    Fernández-Martínez, Eduardo; Morales-Ríos, Martha S; Pérez-Alvarez, Víctor; Muriel, Pablo

    2004-10-01

    Thalidomide has shown to inhibit, selectively and mainly the cytokine tumor necrosis factor-alpha (TNF-alpha), thus, thalidomide has inhibitory consequences on other cytokines; this is ascribed as an immunomodulatory effect. Novel thalidomide analogs are reported with immunomodulatory activity. The aim of this work was to synthesize some of these analogs and to assess them as immunomodulatory agents in an acute model of LPS-induced septic challenge in rat. Animal groups received orally twice a day vehicle carboxymethylcellulose (0.9%), or thalidomide in suspension (100mg/kg), or analogs in an equimolar dose. Two hours after last dose, rats were injected with saline (NaCl, 0.9%, i.p.) or LPS (5mg/kg, i.p.). Groups were sacrificed 2h after injection and samples of blood and liver were obtained. TNF-alpha, interleukin-6, -1beta, and -10 (IL-6, IL-1beta, IL-10) were quantified by enzyme linked immunosorbent assay (ELISA) and studied in plasma and liver. After 2h of LPS-induction, different patterns of measured cytokines were observed with thalidomide analogs administration evidencing their immunomodulatory effects. Interestingly, some analogs decreased significantly plasma and hepatic levels of LPS-induced proinflammatory TNF-alpha and others increased plasma concentration of anti-inflammatory IL-10. Thalidomide analogs also showed slight effects on the remaining proinflammatory cytokines. Differences among immunomodulatory effects of analogs can be related to potency, mechanism of action, and half lives. Thalidomide analogs could be used as a pharmacological tool and in therapeutics in the future.

  10. Water-resources optimization model for Santa Barbara, California

    USGS Publications Warehouse

    Nishikawa, Tracy

    1998-01-01

    A simulation-optimization model has been developed for the optimal management of the city of Santa Barbara's water resources during a drought. The model, which links groundwater simulation with linear programming, has a planning horizon of 5 years. The objective is to minimize the cost of water supply subject to: water demand constraints, hydraulic head constraints to control seawater intrusion, and water capacity constraints. The decision variables are montly water deliveries from surface water and groundwater. The state variables are hydraulic heads. The drought of 1947-51 is the city's worst drought on record, and simulated surface-water supplies for this period were used as a basis for testing optimal management of current water resources under drought conditions. The simulation-optimization model was applied using three reservoir operation rules. In addition, the model's sensitivity to demand, carry over [the storage of water in one year for use in the later year(s)], head constraints, and capacity constraints was tested.

  11. Improving National Water Modeling: An Intercomparison of two High-Resolution, Continental Scale Models, CONUS-ParFlow and the National Water Model

    NASA Astrophysics Data System (ADS)

    Tijerina, D.; Gochis, D.; Condon, L. E.; Maxwell, R. M.

    2017-12-01

    Development of integrated hydrology modeling systems that couple atmospheric, land surface, and subsurface flow is growing trend in hydrologic modeling. Using an integrated modeling framework, subsurface hydrologic processes, such as lateral flow and soil moisture redistribution, are represented in a single cohesive framework with surface processes like overland flow and evapotranspiration. There is a need for these more intricate models in comprehensive hydrologic forecasting and water management over large spatial areas, specifically the Continental US (CONUS). Currently, two high-resolution, coupled hydrologic modeling applications have been developed for this domain: CONUS-ParFlow built using the integrated hydrologic model ParFlow and the National Water Model that uses the NCAR Weather Research and Forecasting hydrological extension package (WRF-Hydro). Both ParFlow and WRF-Hydro include land surface models, overland flow, and take advantage of parallelization and high-performance computing (HPC) capabilities; however, they have different approaches to overland subsurface flow and groundwater-surface water interactions. Accurately representing large domains remains a challenge considering the difficult task of representing complex hydrologic processes, computational expense, and extensive data needs; both models have accomplished this, but have differences in approach and continue to be difficult to validate. A further exploration of effective methodology to accurately represent large-scale hydrology with integrated models is needed to advance this growing field. Here we compare the outputs of CONUS-ParFlow and the National Water Model to each other and with observations to study the performance of hyper-resolution models over large domains. Models were compared over a range of scales for major watersheds within the CONUS with a specific focus on the Mississippi, Ohio, and Colorado River basins. We use a novel set of approaches and analysis for this comparison

  12. A Transiting Jupiter Analog

    NASA Astrophysics Data System (ADS)

    Kipping, D. M.; Torres, G.; Henze, C.; Teachey, A.; Isaacson, H.; Petigura, E.; Marcy, G. W.; Buchhave, L. A.; Chen, J.; Bryson, S. T.; Sandford, E.

    2016-04-01

    Decadal-long radial velocity surveys have recently started to discover analogs to the most influential planet of our solar system, Jupiter. Detecting and characterizing these worlds is expected to shape our understanding of our uniqueness in the cosmos. Despite the great successes of recent transit surveys, Jupiter analogs represent a terra incognita, owing to the strong intrinsic bias of this method against long orbital periods. We here report on the first validated transiting Jupiter analog, Kepler-167e (KOI-490.02), discovered using Kepler archival photometry orbiting the K4-dwarf KIC-3239945. With a radius of (0.91+/- 0.02) {R}{{J}}, a low orbital eccentricity ({0.06}-0.04+0.10), and an equilibrium temperature of (131+/- 3) K, Kepler-167e bears many of the basic hallmarks of Jupiter. Kepler-167e is accompanied by three Super-Earths on compact orbits, which we also validate, leaving a large cavity of transiting worlds around the habitable-zone. With two transits and continuous photometric coverage, we are able to uniquely and precisely measure the orbital period of this post snow-line planet (1071.2323 ± 0.0006d), paving the way for follow-up of this K = 11.8 mag target.

  13. Antitumor properties of (5E,7E) analogs of vitamin D3.

    PubMed

    Filip, B; Milczarek, M; Wietrzyk, J; Chodyński, M; Kutner, A

    2010-07-01

    Geometric isomers (5E,7E) of major active metabolites of vitamin D3 [1alpha,25(OH)2D3 and (24R)-1,24(OH)2D3] were synthesized by a new convenient procedure. Vitamin D triene system of the metabolites was first derivatized as a Diels-Alder adduct. Removal of the triene protecting group, in a key synthetic step, yielded the title compounds PRI-2208 and PRI-2209, respectively. The analogs were examined for their antiproliferative activity in vitro against human breast cancer cells (MCF-7) and promyelocytic leukemia (HL-60) cells. The activity was compared with one of the parent compounds. Both analogs examined revealed similar or higher antiproliferative activity compared to 1alpha,25(OH)2D3 or to (24R)-1,24(OH)2D3. The studies of calcemic activity in vivo showed that analogs PRI-2208 and PRI-2209 did not influence the serum calcium level in doses, in which 1alpha,25(OH)2D3 or (24R)-1,24(OH)2D3 significantly increased this level. The antitumor activity of these analogs in the LLC mice tumor model was studied. Analog PRI-2208 was found to be more active in inhibiting LLC tumor growth than 1alpha,25(OH)2D3, as well as than PRI-2191 and PRI-2209. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

  14. An Analog Computer for Electronic Engineering Education

    ERIC Educational Resources Information Center

    Fitch, A. L.; Iu, H. H. C.; Lu, D. D. C.

    2011-01-01

    This paper describes a compact analog computer and proposes its use in electronic engineering teaching laboratories to develop student understanding of applications in analog electronics, electronic components, engineering mathematics, control engineering, safe laboratory and workshop practices, circuit construction, testing, and maintenance. The…

  15. Implementation study of an analog spiking neural network for assisting cardiac delay prediction in a cardiac resynchronization therapy device.

    PubMed

    Sun, Qing; Schwartz, François; Michel, Jacques; Herve, Yannick; Dalmolin, Renzo

    2011-06-01

    In this paper, we aim at developing an analog spiking neural network (SNN) for reinforcing the performance of conventional cardiac resynchronization therapy (CRT) devices (also called biventricular pacemakers). Targeting an alternative analog solution in 0.13- μm CMOS technology, this paper proposes an approach to improve cardiac delay predictions in every cardiac period in order to assist the CRT device to provide real-time optimal heartbeats. The primary analog SNN architecture is proposed and its implementation is studied to fulfill the requirement of very low energy consumption. By using the Hebbian learning and reinforcement learning algorithms, the intended adaptive CRT device works with different functional modes. The simulations of both learning algorithms have been carried out, and they were shown to demonstrate the global functionalities. To improve the realism of the system, we introduce various heart behavior models (with constant/variable heart rates) that allow pathologic simulations with/without noise on the signals of the input sensors. The simulations of the global system (pacemaker models coupled with heart models) have been investigated and used to validate the analog spiking neural network implementation.

  16. Antiparasitic Activities of Novel, Orally Available Fumagillin Analogs

    PubMed Central

    Centrella, Paolo A.; Contonio, Brooke D.; Morgan, Barry A.; O’Donovan, Gary; Paradise, Christopher L.; Skinner, Steven R.; Sluboski, Barbara; Svendsen, Jennifer L.; White, Kerry F.; Debnath, Anjan; Gut, Jiri; Wilson, Nathan; McKerrow, James H.; DeRisi, Joseph L.; Rosenthal, Philip J.; Chiang, Peter K.

    2009-01-01

    Fumagillin, an irreversible inhibitor of MetAP2, has been shown to potently inhibit growth of malaria parasites in vitro. Here, we demonstrate activity of fumagillin analogs with an improved pharmacokinetic profile against malaria parasites, trypanosomes, and amoebas. A subset of the compounds showed efficacy in a murine malaria model. The observed SAR forms a basis for further optimization of fumagillin based inhibitors against parasitic targets by inhibition of MetAP2. PMID:19648008

  17. Enzymatic Transition States, Transition-State Analogs, Dynamics, Thermodynamics, and Lifetimes

    PubMed Central

    Schramm, Vern L.

    2017-01-01

    Experimental analysis of enzymatic transition-state structures uses kinetic isotope effects (KIEs) to report on bonding and geometry differences between reactants and the transition state. Computational correlation of experimental values with chemical models permits three-dimensional geometric and electrostatic assignment of transition states formed at enzymatic catalytic sites. The combination of experimental and computational access to transition-state information permits (a) the design of transition-state analogs as powerful enzymatic inhibitors, (b) exploration of protein features linked to transition-state structure, (c) analysis of ensemble atomic motions involved in achieving the transition state, (d) transition-state lifetimes, and (e) separation of ground-state (Michaelis complexes) from transition-state effects. Transition-state analogs with picomolar dissociation constants have been achieved for several enzymatic targets. Transition states of closely related isozymes indicate that the protein’s dynamic architecture is linked to transition-state structure. Fast dynamic motions in catalytic sites are linked to transition-state generation. Enzymatic transition states have lifetimes of femtoseconds, the lifetime of bond vibrations. Binding isotope effects (BIEs) reveal relative reactant and transition-state analog binding distortion for comparison with actual transition states. PMID:21675920

  18. Modeling phytoremediation of nitrogen-polluted water using water hyacinth (Eichhornia crassipes)

    NASA Astrophysics Data System (ADS)

    Mayo, Aloyce W.; Hanai, Emmanuel E.

    2017-08-01

    Water hyacinth (Eichhornia crassipes) has a great potential for purification of wastewater through physical, chemical and biological mechanisms. In an attempt to improve the quality of effluents discharged from waste stabilization ponds at the University of Dar es Salaam, a pilot plant was constructed to experiment the effectiveness of this plants for transformation and removal of nitrogen. Samples of wastewater were collected and examined for water quality parameters, including pH, temperature, dissolved oxygen, and various forms of nitrogen, which were used as input parameters in a kinetic mathematical model. A conceptual model was then developed to model various processes in the system using STELLA 6.0.1 software. The results show that total nitrogen was removed by 63.9%. Denitrification contributed 73.8% of the removed nitrogen. Other dominant nitrogen removal mechanisms are net sedimentation and uptake by water hyacinth, which contributed 16.7% and 9.5% of the removed nitrogen, respectively. The model indicated that in presence of water hyacinth biofilm about 1.26 g Nm-2day-1 of nitrogen was removed. However, in the absence of biofilm in water hyacinth pond, the permanent nitrogen removal was only 0.89 g Nm-2day-1. This suggests that in absence of water hyacinth, the efficiency of nitrogen removal would decrease by 29.4%.

  19. Fluorinated analogs of malachite green: synthesis and toxicity.

    PubMed

    Kraus, George A; Jeon, Insik; Nilsen-Hamilton, Marit; Awad, Ahmed M; Banerjee, Jayeeta; Parvin, Bahram

    2008-04-27

    A series of fluorinated analogs of malachite green (MG) have been synthesized and their toxicity to Saccharomyces cerevisiae and a human ovarian epithelial cell line examined. The toxicity profiles were found to be different for these two species. Two analogs, one with 2,4-difluoro substitution and the other with 2-fluoro substitution seem to be the most promising analogs because they showed the lowest toxicity to the human cells.

  20. Reconfigurable Analog PDE computation for Baseband and RFComputation

    DTIC Science & Technology

    2017-03-01

    waveguiding PDEs. One-dimensional ladder topologies enable linear delays, linear-phase analog filters , as well as analog beamforming, potentially at RF...performance. This discussion focuses on ODE / PDE analog computation available in SoC FPAA structures. One such computation is a ladder filter (Fig...Implementation of a one-dimensional ladder filter for computing inductor (L) and capacitor (C) lines. These components can be implemented in CABs or as

  1. Spatial Irrigation Management Using Remote Sensing Water Balance Modeling and Soil Water Content Monitoring

    NASA Astrophysics Data System (ADS)

    Barker, J. Burdette

    Spatially informed irrigation management may improve the optimal use of water resources. Sub-field scale water balance modeling and measurement were studied in the context of irrigation management. A spatial remote-sensing-based evapotranspiration and soil water balance model was modified and validated for use in real-time irrigation management. The modeled ET compared well with eddy covariance data from eastern Nebraska. Placement and quantity of sub-field scale soil water content measurement locations was also studied. Variance reduction factor and temporal stability were used to analyze soil water content data from an eastern Nebraska field. No consistent predictor of soil water temporal stability patterns was identified. At least three monitoring locations were needed per irrigation management zone to adequately quantify the mean soil water content. The remote-sensing-based water balance model was used to manage irrigation in a field experiment. The research included an eastern Nebraska field in 2015 and 2016 and a western Nebraska field in 2016 for a total of 210 plot-years. The response of maize and soybean to irrigation using variations of the model were compared with responses from treatments using soil water content measurement and a rainfed treatment. The remote-sensing-based treatment prescribed more irrigation than the other treatments in all cases. Excessive modeled soil evaporation and insufficient drainage times were suspected causes of the model drift. Modifying evaporation and drainage reduced modeled soil water depletion error. None of the included response variables were significantly different between treatments in western Nebraska. In eastern Nebraska, treatment differences for maize and soybean included evapotranspiration and a combined variable including evapotranspiration and deep percolation. Both variables were greatest for the remote-sensing model when differences were found to be statistically significant. Differences in maize yield in

  2. Synthetic Curcumin Analogs as Inhibitors of β -Amyloid Peptide Aggregation: Potential Therapeutic and Diagnostic Agents for Alzheimer's Disease.

    PubMed

    Bukhari, Syed Nasir Abbas; Jantan, Ibrahim

    2015-01-01

    There is a crucial need to develop new effective drugs for Alzheimer's disease (AD) as the currently available AD treatments provide only momentary and incomplete symptomatic relief. Amongst natural products, curcumin, a major constituent of turmeric, has been intensively investigated for its neuroprotective effect against β-amyloid (Aβ)-induced toxicity in cultured neuronal cells. The ability of curcumin to attach to Aβ peptide and prevent its accumulation is attributed to its three structural characteristics such as the presence of two aromatic end groups and their co-planarity, the length and rigidity of the linker region and the substitution conformation of these aromatics. However, curcumin failed to reach adequate brain levels after oral absorption in AD clinical trials due to its low water solubility and poor oral bioavailability. A number of new curcumin analogs that mimic the active site of the compound along with analogs that mimic the curcumin anti-amyloid effect combined with anticholinesterase effect have been developed to enhance the bioavailability, pharmacokinetics, water solubility, stability at physiological conditions and delivery of curcumin. In this article, we have summarized all reported synthetic analogs of curcumin showing effects on β-amyloid and discussed their potential as therapeutic and diagnostic agents for AD.

  3. Modeling uncertainty: quicksand for water temperature modeling

    USGS Publications Warehouse

    Bartholow, John M.

    2003-01-01

    Uncertainty has been a hot topic relative to science generally, and modeling specifically. Modeling uncertainty comes in various forms: measured data, limited model domain, model parameter estimation, model structure, sensitivity to inputs, modelers themselves, and users of the results. This paper will address important components of uncertainty in modeling water temperatures, and discuss several areas that need attention as the modeling community grapples with how to incorporate uncertainty into modeling without getting stuck in the quicksand that prevents constructive contributions to policy making. The material, and in particular the reference, are meant to supplement the presentation given at this conference.

  4. Synthetic heparin-binding growth factor analogs

    DOEpatents

    Pena, Louis A.; Zamora, Paul; Lin, Xinhua; Glass, John D.

    2007-01-23

    The invention provides synthetic heparin-binding growth factor analogs having at least one peptide chain that binds a heparin-binding growth factor receptor, covalently bound to a hydrophobic linker, which is in turn covalently bound to a non-signaling peptide that includes a heparin-binding domain. The synthetic heparin-binding growth factor analogs are useful as soluble biologics or as surface coatings for medical devices.

  5. Southern Ocean bottom water characteristics in CMIP5 models

    NASA Astrophysics Data System (ADS)

    Heuzé, CéLine; Heywood, Karen J.; Stevens, David P.; Ridley, Jeff K.

    2013-04-01

    Southern Ocean deep water properties and formation processes in climate models are indicative of their capability to simulate future climate, heat and carbon uptake, and sea level rise. Southern Ocean temperature and density averaged over 1986-2005 from 15 CMIP5 (Coupled Model Intercomparison Project Phase 5) climate models are compared with an observed climatology, focusing on bottom water. Bottom properties are reasonably accurate for half the models. Ten models create dense water on the Antarctic shelf, but it mixes with lighter water and is not exported as bottom water as in reality. Instead, most models create deep water by open ocean deep convection, a process occurring rarely in reality. Models with extensive deep convection are those with strong seasonality in sea ice. Optimum bottom properties occur in models with deep convection in the Weddell and Ross Gyres. Bottom Water formation processes are poorly represented in ocean models and are a key challenge for improving climate predictions.

  6. Immune Function Changes during a Spaceflight-Analog Undersea Mission

    NASA Technical Reports Server (NTRS)

    Crucian, Brian; Stowe, Raymond; Mehta, Satish; Quiniarte, Heather; Yetman, Deborah; Pierson, Duane; Sams, Clarence

    2008-01-01

    There is ample evidence to suggest that space flight leads to immune system dysregulation. This may be a result of microgravity, confinement, physiological stress, radiation, environment or other mission-associated factors. It is attractive to utilize ground-based spaceflight analogs as appropriate to investigate this phenomenon. For spaceflight-associated immune dysregulation (SAID), the authors believe the most appropriate analogs might be NEEMO (short duration, Shuttle analog), Antarctic winter-over (long-duration, ISS analog) and the Haughton Mars Project in the Canadian Arctic (intermediate-duration). Each of these analogs replicate isolation, mission-associated stress, disrupted circadian rhythms, and other aspects of flight thought to contribute to SAID. To validate NEEMO as a flight analog with respect to SAID, a pilot study was conducted during the NEEMO-12 and 13 missions during 2007. Assays were performed that assessed immune status, physiological stress and latent viral reactivation. Blood and saliva samples were collected at pre-, mid-, and post-mission timepoints.

  7. COMPILATION OF GROUND-WATER MODELS

    EPA Science Inventory

    Ground-water modeling is a computer-based methodology for mathematical analysis of the mechanisms and controls of ground-water systems for the evaluation of policies, action, and designs that may affect such systems. n addition to satisfying scientific interest in the workings of...

  8. Synthetic heparin-binding factor analogs

    DOEpatents

    Pena, Louis A [Poquott, NY; Zamora, Paul O [Gaithersburg, MD; Lin, Xinhua [Plainview, NY; Glass, John D [Shoreham, NY

    2010-04-20

    The invention provides synthetic heparin-binding growth factor analogs having at least one peptide chain, and preferably two peptide chains branched from a dipeptide branch moiety composed of two trifunctional amino acid residues, which peptide chain or chains bind a heparin-binding growth factor receptor and are covalently bound to a non-signaling peptide that includes a heparin-binding domain, preferably by a linker, which may be a hydrophobic linker. The synthetic heparin-binding growth factor analogs are useful as pharmaceutical agents, soluble biologics or as surface coatings for medical devices.

  9. Multimodal vibration damping of a plate by piezoelectric coupling to its analogous electrical network

    NASA Astrophysics Data System (ADS)

    Lossouarn, B.; Deü, J.-F.; Aucejo, M.; Cunefare, K. A.

    2016-11-01

    Multimodal damping can be achieved by coupling a mechanical structure to an electrical network exhibiting similar modal properties. Focusing on a plate, a new topology for such an electrical analogue is found from a finite difference approximation of the Kirchhoff-Love theory and the use of the direct electromechanical analogy. Discrete models based on element dynamic stiffness matrices are proposed to simulate square plate unit cells coupled to their electrical analogues through two-dimensional piezoelectric transducers. A setup made of a clamped plate covered with an array of piezoelectric patches is built in order to validate the control strategy and the numerical models. The analogous electrical network is implemented with passive components as inductors, transformers and the inherent capacitance of the piezoelectric patches. The effect of the piezoelectric coupling on the dynamics of the clamped plate is significant as it creates the equivalent of a multimodal tuned mass damping. An adequate tuning of the network then yields a broadband vibration reduction. In the end, the use of an analogous electrical network appears as an efficient solution for the multimodal control of a plate.

  10. Application of Particle Image Velocimetry and Reference Image Topography to jet shock cells using the hydraulic analogy

    NASA Astrophysics Data System (ADS)

    Kumar, Vaibhav; Ng, Ivan; Sheard, Gregory J.; Brocher, Eric; Hourigan, Kerry; Fouras, Andreas

    2011-08-01

    This paper examines the shock cell structure, vorticity and velocity field at the exit of an underexpanded jet nozzle using a hydraulic analogy and the Reference Image Topography technique. Understanding the flow in this region is important for the mitigation of screech, an aeroacoustic problem harmful to aircraft structures. Experiments are conducted on a water table, allowing detailed quantitative investigation of this important flow regime at a greatly reduced expense. Conventional Particle Image Velocimetry is employed to determine the velocity and vorticity fields of the nozzle exit region. Applying Reference Image Topography, the wavy water surface is reconstructed and when combined with the hydraulic analogy, provides a pressure map of the region. With this approach subtraction of surfaces is used to highlight the unsteady regions of the flow, which is not as convenient or quantitative with conventional Schlieren techniques. This allows a detailed analysis of the shock cell structures and their interaction with flow instabilities in the shear layer that are the underlying cause of jet screech.

  11. An analog silicon retina with multichip configuration.

    PubMed

    Kameda, Seiji; Yagi, Tetsuya

    2006-01-01

    The neuromorphic silicon retina is a novel analog very large scale integrated circuit that emulates the structure and the function of the retinal neuronal circuit. We fabricated a neuromorphic silicon retina, in which sample/hold circuits were embedded to generate fluctuation-suppressed outputs in the previous study [1]. The applications of this silicon retina, however, are limited because of a low spatial resolution and computational variability. In this paper, we have fabricated a multichip silicon retina in which the functional network circuits are divided into two chips: the photoreceptor network chip (P chip) and the horizontal cell network chip (H chip). The output images of the P chip are transferred to the H chip with analog voltages through the line-parallel transfer bus. The sample/hold circuits embedded in the P and H chips compensate for the pattern noise generated on the circuits, including the analog communication pathway. Using the multichip silicon retina together with an off-chip differential amplifier, spatial filtering of the image with an odd- and an even-symmetric orientation selective receptive fields was carried out in real time. The analog data transfer method in the present multichip silicon retina is useful to design analog neuromorphic multichip systems that mimic the hierarchical structure of neuronal networks in the visual system.

  12. Solution, solid phase and computational structures of apicidin and its backbone-reduced analogs.

    PubMed

    Kranz, Michael; Murray, Peter John; Taylor, Stephen; Upton, Richard J; Clegg, William; Elsegood, Mark R J

    2006-06-01

    The recently isolated broad-spectrum antiparasitic apicidin (1) is one of the few naturally occurring cyclic tetrapeptides (CTP). Depending on the solvent, the backbone of 1 exhibits two gamma-turns (in CH(2)Cl(2)) or a beta-turn (in DMSO), differing solely in the rotation of the plane of one of the amide bonds. In the X-ray crystal structure, the peptidic C==Os and NHs are on opposite sides of the backbone plane, giving rise to infinite stacks of cyclotetrapeptides connected by three intermolecular hydrogen bonds between the backbones. Conformational searches (Amber force field) on a truncated model system of 1 confirm all three backbone conformations to be low-energy states. The previously synthesized analogs of 1 containing a reduced amide bond exhibit the same backbone conformation as 1 in DMSO, which is confirmed further by the X-ray crystal structure of a model system of the desoxy analogs of 1. This similarity helps in explaining why the desoxy analogs retain some of the antiprotozoal activities of apicidin. The backbone-reduction approach designed to facilitate the cyclization step of the acyclic precursors of the CTPs seems to retain the conformational preferences of the parent peptide backbone.

  13. Reynolds analogy for the Rayleigh problem at various flow modes.

    PubMed

    Abramov, A A; Butkovskii, A V

    2016-07-01

    The Reynolds analogy and the extended Reynolds analogy for the Rayleigh problem are considered. For a viscous incompressible fluid we derive the Reynolds analogy as a function of the Prandtl number and the Eckert number. We show that for any positive Eckert number, the Reynolds analogy as a function of the Prandtl number has a maximum. For a monatomic gas in the transitional flow regime, using the direct simulation Monte Carlo method, we investigate the extended Reynolds analogy, i.e., the relation between the shear stress and the energy flux transferred to the boundary surface, at different velocities and temperatures. We find that the extended Reynolds analogy for a rarefied monatomic gas flow with the temperature of the undisturbed gas equal to the surface temperature depends weakly on time and is close to 0.5. We show that at any fixed dimensionless time the extended Reynolds analogy depends on the plate velocity and temperature and undisturbed gas temperature mainly via the Eckert number. For Eckert numbers of the order of unity or less we generalize an extended Reynolds analogy. The generalized Reynolds analogy depends mainly only on dimensionless time for all considered Eckert numbers of the order of unity or less.

  14. Two analogy strategies: the cases of mind metaphors and introspection

    NASA Astrophysics Data System (ADS)

    Fischer, Eugen

    2018-04-01

    Analogical reasoning is often employed in problem-solving and metaphor interpretation. This paper submits that, as a default, analogical reasoning addressing these different tasks employs different mapping strategies. In problem-solving, it employs analogy-maximising strategies (like structure mapping, Gentner, D., & Markman, A. B. (1997). Structure mapping in analogy and similarity. American Psychologist, 52, 45-56); in metaphor interpretation, analogy-minimising strategies (like ATT-Meta, Barnden, J. A. (2015). Open-ended elaborations in creative metaphor. In T. R. Besold, M. Schorlemmer, & A. Smaill (Eds.), Computational creativity research: Towards creative machines (pp. 217-242). Berlin: Springer). The two strategies interact in analogical reasoning with conceptual metaphors. This interaction leads to predictable fallacies. The paper supports these hypotheses through case-studies on "mind" metaphors from ordinary discourse, and abstract problem-solving in the philosophy of mind, respectively. It shows that (1) default metaphorical interpretations for vision- and space-cognition metaphors can be derived with a variant of the analogy-minimising ATT-Meta approach, (2) philosophically influential introspective conceptions of the mind can be derived with conceptual metaphors only through an analogy-maximising strategy, and (3) the interaction of these strategies leads to hitherto unrecognised fallacies in analogical reasoning with metaphors. This yields a debunking explanation of introspective conceptions.

  15. Six-Degree Head-Down Tilt Bed Rest: Forty Years of Development as a Physiological Analog for Weightlessness

    NASA Technical Reports Server (NTRS)

    Smith, Jeffrey D.; Cromwell, Ronita L.; Kundrot, Craig E.; Charles, John B.

    2011-01-01

    Early on, bed rest was recognized as a method for inducing many of the physiological changes experienced by spaceflight. Head-down tilt (HDT) bed rest was first introduced as an analog for spaceflight by a Soviet team led by Genin and Kakurin. Their study was performed in 1970 (at -4 degrees) and lasted for 30 days; results were reported in the Russian Journal of Space Biology (Kosmicheskaya Biol. 1972; 6(4): 26-28 & 45-109). The goal was to test physiological countermeasures for cosmonauts who would soon begin month-long missions to the Salyut space station. HDT was chosen to produce a similar sensation of blood flow to the head reported by Soyuz cosmonauts. Over the next decade, other tilt angles were studied and comparisons with spaceflight were made, showing that HDT greater than 4 degrees was superior to horizontal bed rest for modeling acute physiological changes observed in space; but, at higher angles, subjects experienced greater discomfort without clearly improving the physiological comparison to spaceflight. A joint study performed by US and Soviet investigators, in 1979, set the goal of standardization of baseline conditions and chose 6-degrees HDT. This effectively established 6-degree HDT bed rest as the internationally-preferred analog for weightlessness and, since 1990, nearly all further studies have been conducted at 6-degrees HDT. A thorough literature review (1970-2010) revealed 534 primary scientific journal articles which reported results from using HDT as a physiological analog for spaceflight. These studies have ranged from as little as 10 minutes to the longest duration of 370 days. Long-term studies lasting four weeks or more have resulted in over 170 primary research articles. Today, the 6-degree HDT model provides a consistent, thoroughly-tested, ground-based analog for spaceflight and allows the proper scientific controls for rigorous testing of physiological countermeasures; however, all models have their strengths and limits. The 6

  16. Effects of Hydrostatic Loading on a Self-Aggregating, Suspension Culture-Derived Cartilage Tissue Analog.

    PubMed

    Kraft, Jeffrey J; Jeong, Changhoon; Novotny, John E; Seacrist, Thomas; Chan, Gilbert; Domzalski, Marcin; Turka, Christina M; Richardson, Dean W; Dodge, George R

    2011-07-01

    Many approaches are being taken to generate cartilage replacement materials. The goal of this study was to use a self-aggregating suspension culture model of chondrocytes with mechanical preconditioning. Our model differs from others in that it is based on a scaffold-less, self-aggregating culture model that produces a cartilage tissue analog that has been shown to share many similarities with the natural cartilage phenotype. Owing to the known loaded environment under which chondrocytes function in vivo, we hypothesized that applying force to the suspension culture-derived chondrocyte biomass would improve its cartilage-like characteristics and provide a new model for engineering cartilage tissue analogs. In this study, we used a specialized hydrostatic pressure bioreactor system to apply mechanical forces during the growth phase to improve biochemical and biophysical properties of the biomaterial formed. We demonstrated that using this high-density suspension culture, a biomaterial more consistent with the hyaline cartilage phenotype was produced without any foreign material added. Unpassaged chondrocytes responded to a physiologically relevant hydrostatic load by significantly increasing gene expression of critical cartilage molecule collagen and aggrecan along with other cartilage relevant genes, CD44, perlecan, decorin, COMP, and iNOS. This study describes a self-aggregating bioreactor model without foreign material or scaffold in which chondrocytes form a cartilage tissue analog with many features similar to native cartilage. This study represents a promising scaffold-less, methodological advancement in cartilage tissue engineering with potential translational applications to cartilage repair.

  17. Data assimilation with soil water content sensors and pedotransfer functions in soil water flow modeling

    USDA-ARS?s Scientific Manuscript database

    Soil water flow models are based on a set of simplified assumptions about the mechanisms, processes, and parameters of water retention and flow. That causes errors in soil water flow model predictions. Soil water content monitoring data can be used to reduce the errors in models. Data assimilation (...

  18. Effects of spatially distributed sectoral water management on the redistribution of water resources in an integrated water model

    NASA Astrophysics Data System (ADS)

    Voisin, Nathalie; Hejazi, Mohamad I.; Leung, L. Ruby; Liu, Lu; Huang, Maoyi; Li, Hong-Yi; Tesfa, Teklu

    2017-05-01

    Realistic representations of sectoral water withdrawals and consumptive demands and their allocation to surface and groundwater sources are important for improving modeling of the integrated water cycle. To inform future model development, we enhance the representation of water management in a regional Earth system (ES) model with a spatially distributed allocation of sectoral water demands simulated by a regional integrated assessment (IA) model to surface and groundwater systems. The integrated modeling framework (IA-ES) is evaluated by analyzing the simulated regulated flow and sectoral supply deficit in major hydrologic regions of the conterminous U.S, which differ from ES studies looking at water storage variations. Decreases in historical supply deficit are used as metrics to evaluate IA-ES model improvement in representating the complex sectoral human activities for assessing future adaptation and mitigation strategies. We also assess the spatial changes in both regulated flow and unmet demands, for irrigation and nonirrigation sectors, resulting from the individual and combined additions of groundwater and return flow modules. Results show that groundwater use has a pronounced regional and sectoral effect by reducing water supply deficit. The effects of sectoral return flow exhibit a clear east-west contrast in the hydrologic patterns, so the return flow component combined with the IA sectoral demands is a major driver for spatial redistribution of water resources and water deficits in the US. Our analysis highlights the need for spatially distributed sectoral representation of water management to capture the regional differences in interbasin redistribution of water resources and deficits.

  19. Inverse models: A necessary next step in ground-water modeling

    USGS Publications Warehouse

    Poeter, E.P.; Hill, M.C.

    1997-01-01

    Inverse models using, for example, nonlinear least-squares regression, provide capabilities that help modelers take full advantage of the insight available from ground-water models. However, lack of information about the requirements and benefits of inverse models is an obstacle to their widespread use. This paper presents a simple ground-water flow problem to illustrate the requirements and benefits of the nonlinear least-squares repression method of inverse modeling and discusses how these attributes apply to field problems. The benefits of inverse modeling include: (1) expedited determination of best fit parameter values; (2) quantification of the (a) quality of calibration, (b) data shortcomings and needs, and (c) confidence limits on parameter estimates and predictions; and (3) identification of issues that are easily overlooked during nonautomated calibration.Inverse models using, for example, nonlinear least-squares regression, provide capabilities that help modelers take full advantage of the insight available from ground-water models. However, lack of information about the requirements and benefits of inverse models is an obstacle to their widespread use. This paper presents a simple ground-water flow problem to illustrate the requirements and benefits of the nonlinear least-squares regression method of inverse modeling and discusses how these attributes apply to field problems. The benefits of inverse modeling include: (1) expedited determination of best fit parameter values; (2) quantification of the (a) quality of calibration, (b) data shortcomings and needs, and (c) confidence limits on parameter estimates and predictions; and (3) identification of issues that are easily overlooked during nonautomated calibration.

  20. STORM WATER MANAGEMENT MODEL (SWMM) MODERNIZATION

    EPA Science Inventory

    The U.S. Environmental Protection Agency's Water Supply and Water Resources Division in partnership with the consulting firm of CDM to redevelop and modernize the Storm Water Management Model (SWMM). In the initial phase of this project EPA rewrote SWMM's computational engine usi...

  1. The Best Modern Analog for Eocene Arctic Forests is within Today's Korean Peninsula

    NASA Astrophysics Data System (ADS)

    Schubert, B.; Jahren, H.; Eberle, J.; Sternberg, L. O.; Ellsworth, P.; Eberth, D.; Sweet, A.

    2011-12-01

    In the 25 years that have passed since the first extensive descriptions of the Fossil Forests that persisted above the Arctic Circle during the Eocene (~45-54 Ma), no less than four locations have been suggested as modern analogs. These locations represent a diverse collection of biomes and temperature/precipitation environments, and include the southeastern Unites States and southeastern Asia (based on flora and fauna assemblages), southern Chile and the U.S. Pacific Northwest (based on biomass and productivity estimates), and Pacific Northwestern U.S. and Canada (based on mean annual temperature and mean annual precipitation). Here we report on new isotope datasets that allow for a prediction of best modern analog based on a quantitative characterization of paleoseasonality. First, we report high-resolution carbon isotope data from fossil tree rings that record the ratio of summer to winter precipitation. Second, we report analyses of the oxygen isotope composition of phenylglucosazone, a compound isolated from fossil cellulose that straightforwardly records the oxygen isotope composition of meteoric water available to the tree. Together, our analyses indicate that the fossil forests of the Eocene Arctic thrived under a summer-dominated, high-intensity, seasonal precipitation regime, with at least 279 mm of rainfall during the wettest month. A quantitative comparison of mean-annual temperature and precipitation, fossil and modern plant communities, and the seasonality indices, highlights the Korean peninsula as the most appropriate modern analog for the Arctic Eocene forests, in preference to the North and South American analogs previously proposed.

  2. Moon and Mars Analog Mission Activities for Mauna Kea 2012

    NASA Technical Reports Server (NTRS)

    Graham, Lee D.; Morris, Richard V.; Graff, Trevor G.; Yingst, R. Aileen; tenKate, I. L.; Glavin, Daniel P.; Hedlund, Magnus; Malespin, Charles A.; Mumm, Erik

    2012-01-01

    Rover-based 2012 Moon and Mars Analog Mission Activities (MMAMA) scientific investigations were recently completed at Mauna Kea, Hawaii. Scientific investigations, scientific input, and science operations constraints were tested in the context of an existing project and protocols for the field activities designed to help NASA achieve the Vision for Space Exploration. Initial science operations were planned based on a model similar to the operations control of the Mars Exploration Rovers (MER). However, evolution of the operations process occurred as the analog mission progressed. We report here on the preliminary sensor data results, an applicable methodology for developing an optimum science input based on productive engineering and science trades discussions and the science operations approach for an investigation into the valley on the upper slopes of Mauna Kea identified as "Apollo Valley".

  3. Three-dimensional ``Mercedes-Benz'' model for water

    NASA Astrophysics Data System (ADS)

    Dias, Cristiano L.; Ala-Nissila, Tapio; Grant, Martin; Karttunen, Mikko

    2009-08-01

    In this paper we introduce a three-dimensional version of the Mercedes-Benz model to describe water molecules. In this model van der Waals interactions and hydrogen bonds are given explicitly through a Lennard-Jones potential and a Gaussian orientation-dependent terms, respectively. At low temperature the model freezes forming Ice-I and it reproduces the main peaks of the experimental radial distribution function of water. In addition to these structural properties, the model also captures the thermodynamical anomalies of water: The anomalous density profile, the negative thermal expansivity, the large heat capacity, and the minimum in the isothermal compressibility.

  4. Three-dimensional "Mercedes-Benz" model for water.

    PubMed

    Dias, Cristiano L; Ala-Nissila, Tapio; Grant, Martin; Karttunen, Mikko

    2009-08-07

    In this paper we introduce a three-dimensional version of the Mercedes-Benz model to describe water molecules. In this model van der Waals interactions and hydrogen bonds are given explicitly through a Lennard-Jones potential and a Gaussian orientation-dependent terms, respectively. At low temperature the model freezes forming Ice-I and it reproduces the main peaks of the experimental radial distribution function of water. In addition to these structural properties, the model also captures the thermodynamical anomalies of water: The anomalous density profile, the negative thermal expansivity, the large heat capacity, and the minimum in the isothermal compressibility.

  5. Arterial Pressure Analog.

    ERIC Educational Resources Information Center

    Heusner, A. A.; Tracy, M. L.

    1980-01-01

    Describes a simple hydraulic analog which allows students to explore some physical aspects of the cardiovascular system and provides them with a means to visualize and conceptualize these basic principles. Simulates the behavior of arterial pressure in response to changes in heart rate, stroke volume, arterial compliance, and peripheral…

  6. Substituent effect on the thermodynamic solubility of structural analogs: relative contribution of crystal packing and hydration.

    PubMed

    Ozaki, Shunsuke; Nakagawa, Yoshiaki; Shirai, Osamu; Kano, Kenji

    2014-11-01

    Thermodynamic analysis of the solubility of benzoylphenylurea (BPU) derivatives was conducted to investigate the relative importance of crystal packing and hydration for improving solubility with minor structural modification. The contribution of crystal packing to solubility was evaluated from the change in Gibbs energy on the transition from the crystalline to liquid state. Hydration Gibbs energy was estimated using a linear free-energy relationship between octanol-water partition coefficients and gas-water partition coefficients. The established solubility model satisfactorily explained the relative thermodynamic solubility of the model compounds and revealed that crystal packing and hydration equally controlled solubility of the structural analogs. All hydrophobic substituents were undesirable for solubility in terms of hydration, as expected. On the other hand, some of these hydrophobic substituents destabilized crystal packing and improved the solubility of the BPU derivatives when their impact on crystal packing exceeded their negative influence on hydration. The replacement of a single substituent could cause more than a 10-fold enhancement in thermodynamic solubility; this degree of improvement was comparable to that generally achieved by amorphous formulations. Detailed analysis of thermodynamic solubility will allow us to better understand the true substituent effect and design drug-like candidates efficiently. © 2014 Wiley Periodicals, Inc. and the American Pharmacists Association.

  7. Analog simulation of flux-summing servo-model, phases 1 and 2

    NASA Technical Reports Server (NTRS)

    Hriber, E. J.

    1984-01-01

    The analog simulation was developed for a closed-loop system having an electrohydraulic flux-summing servo valve and actuator with associated inertial load. One-fourth of the system's total forward gain is carried by each of four channels. The present study successfully applied failure mode management techniques to the problem of channel failure. Digital logic circuitry was developed to maintain the overall forward gain of the system at a constant value, in the presence of channel failure. Finally, the stability of the system was verified, and performance characteristics were determined through the use of frequency response methods.

  8. Rotanone analogs: method of preparation and use

    DOEpatents

    VanBrocklin, Henry F; O& #x27; Neil, James P; Gibbs, Andrew R; Erathodiyil, Nandanan

    2013-10-08

    The present invention provides rotenone analogs and methods of making and using them. Labeled with single photon and positron emitting isotopes, the rotenone analogs of the present invention are useful in, for example, clinical imaging applications as tracers to measure cardiac blood flow and detect regions of ischemia.

  9. Analogical Instruction in Statistics: Implications for Social Work Educators

    ERIC Educational Resources Information Center

    Thomas, Leela

    2008-01-01

    This paper examines the use of analogies in statistics instruction. Much has been written about the difficulty social work students have with statistics. To address this concern, Glisson and Fischer (1987) called for the use of analogies. Understanding of analogical problem solving has surged in the last few decades with the integration of…

  10. Modern Communication: Exploring Physiological Transmission through Tech-Savvy Analogies

    ERIC Educational Resources Information Center

    Hollabaugh, Christopher R.; Milanick, Mark A.

    2014-01-01

    Analogies are often helpful for students to grasp key physiological concepts; sometimes the technical jargon makes the concept seem more complex than it actually is. In this article the authors provide several analogies for information transfer processes that sometimes confuse students. For an analogy to be useful, of course, it needs to be…

  11. Menaquinone analogs inhibit growth of bacterial pathogens.

    PubMed

    Schlievert, Patrick M; Merriman, Joseph A; Salgado-Pabón, Wilmara; Mueller, Elizabeth A; Spaulding, Adam R; Vu, Bao G; Chuang-Smith, Olivia N; Kohler, Petra L; Kirby, John R

    2013-11-01

    Gram-positive bacteria cause serious human illnesses through combinations of cell surface and secreted virulence factors. We initiated studies with four of these organisms to develop novel topical antibacterial agents that interfere with growth and exotoxin production, focusing on menaquinone analogs. Menadione, 1,4-naphthoquinone, and coenzymes Q1 to Q3 but not menaquinone, phylloquinone, or coenzyme Q10 inhibited the growth and to a greater extent exotoxin production of Staphylococcus aureus, Bacillus anthracis, Streptococcus pyogenes, and Streptococcus agalactiae at concentrations of 10 to 200 μg/ml. Coenzyme Q1 reduced the ability of S. aureus to cause toxic shock syndrome in a rabbit model, inhibited the growth of four Gram-negative bacteria, and synergized with another antimicrobial agent, glycerol monolaurate, to inhibit S. aureus growth. The staphylococcal two-component system SrrA/B was shown to be an antibacterial target of coenzyme Q1. We hypothesize that menaquinone analogs both induce toxic reactive oxygen species and affect bacterial plasma membranes and biosynthetic machinery to interfere with two-component systems, respiration, and macromolecular synthesis. These compounds represent a novel class of potential topical therapeutic agents.

  12. Getting water from the water of hydration on Mars

    NASA Technical Reports Server (NTRS)

    Gwynne, O.; Cozzatti, J. P.; Zent, A. P.; Mckay, C. P.

    1991-01-01

    Both Viking landers found evidence of water in small concentration in the soils of Mars. Using the gas chromatograph mass spectrometer the soil samples on Mars were heated to 500 C to release the water. This result lead researchers to believe that the water in the soil of Mars was tightly bound in a hydration state. In the laboratory several Mars analog soils and a few bench mark soils were run through a microwave to determine the amount of water released using this method. The results suggest that sufficient water can be obtained using this method to augment the activities of a human base on Mars.

  13. A geographic data model for representing ground water systems.

    PubMed

    Strassberg, Gil; Maidment, David R; Jones, Norm L

    2007-01-01

    The Arc Hydro ground water data model is a geographic data model for representing spatial and temporal ground water information within a geographic information system (GIS). The data model is a standardized representation of ground water systems within a spatial database that provides a public domain template for GIS users to store, document, and analyze commonly used spatial and temporal ground water data sets. This paper describes the data model framework, a simplified version of the complete ground water data model that includes two-dimensional and three-dimensional (3D) object classes for representing aquifers, wells, and borehole data, and the 3D geospatial context in which these data exist. The framework data model also includes tabular objects for representing temporal information such as water levels and water quality samples that are related with spatial features.

  14. Puerto Rico water resources planning model program description

    USGS Publications Warehouse

    Moody, D.W.; Maddock, Thomas; Karlinger, M.R.; Lloyd, J.J.

    1973-01-01

    Because the use of the Mathematical Programming System -Extended (MPSX) to solve large linear and mixed integer programs requires the preparation of many input data cards, a matrix generator program to produce the MPSX input data from a much more limited set of data may expedite the use of the mixed integer programming optimization technique. The Model Definition and Control Program (MODCQP) is intended to assist a planner in preparing MPSX input data for the Puerto Rico Water Resources Planning Model. The model utilizes a mixed-integer mathematical program to identify a minimum present cost set of water resources projects (diversions, reservoirs, ground-water fields, desalinization plants, water treatment plants, and inter-basin transfers of water) which will meet a set of future water demands and to determine their sequence of construction. While MODCOP was specifically written to generate MPSX input data for the planning model described in this report, the program can be easily modified to reflect changes in the model's mathematical structure.

  15. Synthetic Biology: A Unifying View and Review Using Analog Circuits.

    PubMed

    Teo, Jonathan J Y; Woo, Sung Sik; Sarpeshkar, Rahul

    2015-08-01

    We review the field of synthetic biology from an analog circuits and analog computation perspective, focusing on circuits that have been built in living cells. This perspective is well suited to pictorially, symbolically, and quantitatively representing the nonlinear, dynamic, and stochastic (noisy) ordinary and partial differential equations that rigorously describe the molecular circuits of synthetic biology. This perspective enables us to construct a canonical analog circuit schematic that helps unify and review the operation of many fundamental circuits that have been built in synthetic biology at the DNA, RNA, protein, and small-molecule levels over nearly two decades. We review 17 circuits in the literature as particular examples of feedforward and feedback analog circuits that arise from special topological cases of the canonical analog circuit schematic. Digital circuit operation of these circuits represents a special case of saturated analog circuit behavior and is automatically incorporated as well. Many issues that have prevented synthetic biology from scaling are naturally represented in analog circuit schematics. Furthermore, the deep similarity between the Boltzmann thermodynamic equations that describe noisy electronic current flow in subthreshold transistors and noisy molecular flux in biochemical reactions has helped map analog circuit motifs in electronics to analog circuit motifs in cells and vice versa via a `cytomorphic' approach. Thus, a body of knowledge in analog electronic circuit design, analysis, simulation, and implementation may also be useful in the robust and efficient design of molecular circuits in synthetic biology, helping it to scale to more complex circuits in the future.

  16. Abstract analogical reasoning in high-functioning children with autism spectrum disorders.

    PubMed

    Green, Adam E; Kenworthy, Lauren; Mosner, Maya G; Gallagher, Natalie M; Fearon, Edward W; Balhana, Carlos D; Yerys, Benjamin E

    2014-12-01

    Children with autism spectrum disorders (ASD) exhibit a deficit in spontaneously recognizing abstract similarities that are crucial for generalizing learning to new situations. This may contribute to deficits in the development of appropriate schemas for navigating novel situations, including social interactions. Analogical reasoning is the central cognitive mechanism that enables typically developing children to understand abstract similarities between different situations. Intriguingly, studies of high-functioning children with ASD point to a relative cognitive strength in basic, nonabstract forms of analogical reasoning. If this analogical reasoning ability extends to abstract analogical reasoning (i.e., between superficially dissimilar situations), it may provide a bridge between a cognitive capability and core ASD deficits in areas such as generalization and categorization. This study tested whether preserved analogical reasoning abilities in ASD can be extended to abstract analogical reasoning, using photographs of real-world items and situations. Abstractness of the analogies was determined via a quantitative measure of semantic distance derived from latent semantic analysis. Children with ASD performed as well as typically developing children at identifying abstract analogical similarities when explicitly instructed to apply analogical reasoning. Individual differences in abstract analogical reasoning ability predicted individual differences in a measure of social function in the ASD group. Preliminary analyses indicated that children with ASD, but not typically developing children, showed an effect of age on abstract analogical reasoning. These results provide new evidence that children with ASD are capable of identifying abstract similarities through analogical reasoning, pointing to abstract analogical reasoning as a potential lever for improving generalization skills and social function in ASD. © 2014 International Society for Autism Research, Wiley

  17. Quantum Analog Computing

    NASA Technical Reports Server (NTRS)

    Zak, M.

    1998-01-01

    Quantum analog computing is based upon similarity between mathematical formalism of quantum mechanics and phenomena to be computed. It exploits a dynamical convergence of several competing phenomena to an attractor which can represent an externum of a function, an image, a solution to a system of ODE, or a stochastic process.

  18. The Hadean, Through a Glass Telescopically: Observations of Young Solar Analogs

    NASA Technical Reports Server (NTRS)

    Gaidos, E. J.

    1998-01-01

    Investigations into the Earth's surface environment during the Hadean eon (prior to 3.8 Ga) are hampered by the paucity of the geological and geochemical record and the relative inaccessibility of better-preserved surfaces with possibly similar early histories (i.e., Mars). One approach is to observe nearby, young solar-mass stars as analogs to the Hadean Sun and its environment. A catalog of 38 G and early K stars within 25 pc was constructed based on main-sequence status, bolometric luminosity, lack of known stellar companions within 800 AU, and coronal X-ray luminosities commensurate with the higher activity of solar-mass stars <0.8 b.y. old. Spectroscopic data support the assignment of ages of 0.2 - 0.8 Ga for most of these stars. Observations of these objects will provide insight into external forces that influenced Hadean atmosphere, ocean, and surface evolution (and potential ecosystems), including solar luminosity evolution, the flux and spectrum of solar ultraviolet radiation, the intensity of the solar wind, and the intensity and duration of a late period of heavy bombardment. The standard model of solar evolution predicts a luminosity of 0.75 solar luminosity at the end of the Hadean, implying a terrestrial surface temperature inconsistent with the presence of liquid water and motivating atmospheric greenhouse models. An alternative model fo solar evolution that invokes mass loss, constructed to explain solar Li depletion, attenuates or reverses this luminosity evolution of the atmospheres of Earth and the other terrestrial planets. This model can be tested by Li abundance measurements. The continuum emission from stellar wind plasma during significant mass loss may be detectable at millimeter and radio wavelengths. The Earth (and Moon) experienced a period of intense bombardment prior to 3.8 Ga, long after accretion was completed in the inner solar system and possibly associated with the clearing of residual planetesimals in the outer solar system. Such

  19. Mechanical Analog Approach to Parameter Estimation of Lateral Spacecraft Fuel Slosh

    NASA Technical Reports Server (NTRS)

    Chatman, Yadira; Gangadharan, Sathya; Schlee, Keith; Sudermann, James; Walker, Charles; Ristow, James; Hubert, Carl

    2007-01-01

    The nutation (wobble) of a spinning spacecraft in the presence of energy dissipation is a well-known problem in dynamics and is of particular concern for space missions. Even with modern computing systems, CFD type simulations are not fast enough to allow for large scale Monte Carlo analyses of spacecraft and launch vehicle dynamic behavior with slosh included. Simplified mechanical analogs for the slosh are preferred during the initial stages of design to reduce computational time and effort to evaluate the Nutation Time Constant (NTC). Analytic determination of the slosh analog parameters has met with mixed success and is made even more difficult by the introduction of propellant management devices such as elastomeric diaphragms. By subjecting full-sized fuel tanks with actual flight fuel loads to motion similar to that experienced in flight and measuring the forces experienced by the tanks, these parameters can be determined experimentally. Currently, the identification of the model parameters is a laborious trial-and-error process in which the hand-derived equations of motion for the mechanical analog are evaluated and their results compared with the experimental results. Of particular interest is the effect of diaphragms and bladders on the slosh dynamics and how best to model these devices. An experimental set-up is designed and built to include a diaphragm in the simulated spacecraft fuel tank subjected to lateral slosh. This research paper focuses on the parameter estimation of a SimMechanics model of the simulated spacecraft propellant tank with and without diaphragms using lateral fuel slosh experiments. Automating the parameter identification process will save time and thus allow earlier identification of potential vehicle problems.

  20. Phonological Priming and Orthographic Analogies in Reading.

    ERIC Educational Resources Information Center

    Goswami, Usha

    1990-01-01

    Findings of two experiments involving young children at a reading level of six years to six years, nine months suggest that phonological priming is an insufficient explanation of the analogy effect at the single word level. Phonological priming plays no role in the use of analogies in story reading. (RH)