Oleaginous yeasts from Antarctica: Screening and preliminary approach on lipid accumulation.

PubMed

Viñarta, Silvana C; Angelicola, M Virginia; Barros, J Maximiliano; Fernández, Pablo M; Mac Cormak, Walter; Aybar, Manuel J; de Figueroa, Lucía I C

2016-12-01

The capability of 17 Rhodotorula spp. isolated from Antarctica to accumulate intracellular lipids in nitrogen-limited medium was investigated. As results, 10 isolates were selected by Nile red staining, while 12 isolates were selected as oleaginous by analysis of total lipid content (20.4-73%, w/w of dry biomass). The higher lipid production and accumulation was exhibited for six strains belonging to three species of Rhodotorula (Rhodotorula glutinis, Rhodotorula glacialis, and Rhodotorula laryngis). This is the first report where R. laryngis have been identified within oleaginous specie. Lipid accumulation was evaluated comparatively in two nitrogen-limited glucose-based media (MI and MII). MI (low C/N ratio) was more suitable for biomass and lipid production while in MII (high C/N ratio) total lipid content was improved. R. glutinis R4, R. glacialis R15, and R. glutinis R48 showed high lipid concentrations (4.65-6.93 g L -1 ) and they were able to accumulate large amounts of lipids per gram of biomass (47-77%, w/w). A similar profile in fatty acids composition and content of neutral lipids to vegetable oils was observed, indicating that lipids produced by oleaginous Antarctic yeasts can be considered an alternative feedstock for biodiesel production. Antarctica represents an important source of oleaginous yeasts with adaptive capabilities to accumulate considerable amounts of lipids with biotechnological interest at 15 °C and 25 °C. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Bioprospection of cold-adapted yeasts with biotechnological potential from Antarctica.

PubMed

Martorell, María Martha; Ruberto, Lucas Adolfo Mauro; Fernández, Pablo Marcelo; Castellanos de Figueroa, Lucía Inés; Mac Cormack, Walter Patricio

2017-06-01

The aim of this study was to investigate the ability to produce extracellular hydrolytic enzymes at low temperature of yeasts isolated from 25 de Mayo island, Antarctica, and to identify those exhibiting one or more of the evaluated enzymatic activities. A total of 105 yeast isolates were obtained from different samples and 66 were identified. They belonged to 12 basidiomycetous and four ascomycetous genera. Most of the isolates were ascribed to the genera Cryptococcus, Mrakia, Cystobasidium, Rhodotorula, Gueomyces, Phenoliferia, Leucosporidium, and Pichia. Results from enzymes production at low temperatures revealed that the Antarctic environment contains metabolically diverse cultivable yeasts, which represent potential tools for biotechnological applications. While most the isolates proved to produce 2-4 of the investigated exoenzymes, two of them evidenced the six evaluated enzymatic activities: Pichia caribbica and Guehomyces pullulans, which were characterized as psycrotolerant and psycrophilic, respectively. In addition, P. caribbica could assimilate several n-alkanes and diesel fuel. The enzyme production profile and hydrocarbons assimilation capacity, combined with its high level of biomass production and the extended exponential growth phase make P. caribbica a promising tool for cold environments biotechnological purposes in the field of cold-enzymes production and oil spills bioremediation as well. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

The epiphytic fungus Pseudozyma aphidis induces jasmonic acid- and salicylic acid/nonexpressor of PR1-independent local and systemic resistance.

PubMed

Buxdorf, Kobi; Rahat, Ido; Gafni, Aviva; Levy, Maggie

2013-04-01

Pseudozyma spp. are yeast-like fungi, classified in the Ustilaginales, which are mostly epiphytic or saprophytic and are not pathogenic to plants. Several Pseudozyma species have been reported to exhibit biological activity against powdery mildews. However, previous studies have reported that Pseudozyma aphidis, which can colonize plant surfaces, is not associated with the collapse of powdery mildew colonies. In this report, we describe a novel P. aphidis strain and study its interactions with its plant host and the plant pathogen Botrytis cinerea. This isolate was found to secrete extracellular metabolites that inhibit various fungal pathogens in vitro and significantly reduce B. cinerea infection in vivo. Moreover, P. aphidis sensitized Arabidopsis (Arabidopsis thaliana) plants' defense machinery via local and systemic induction of pathogenesis-related1 (PR1) and plant defensin1.2 (PDF1.2) expression. P. aphidis also reduced B. cinerea infection, locally and systemically, in Arabidopsis mutants impaired in jasmonic acid (JA) or salicylic acid (SA) signaling. Thus, in addition to direct inhibition, P. aphidis may inhibit B. cinerea infection via induced resistance in a manner independent of SA, JA, and Nonexpressor of PR1 (NPR1). P. aphidis primed the plant defense machinery and induced stronger activation of PDF1.2 after B. cinerea infection. Finally, P. aphidis fully or partially reconstituted PR1 and PDF1.2 expression in npr1-1 mutant and in plants with the SA hydroxylase NahG transgene, but not in a jasmonate resistant1-1 mutant, after B. cinerea infection, suggesting that P. aphidis can bypass the SA/NPR1, but not JA, pathway to activate PR genes. Thus, either partial gene activation is sufficient to induce resistance, or the resistance is not directed solely through PR1 and PDF1.2 but probably through other pathogen-resistance genes or pathways as well.

Dioszegia antarctica sp. nov. and Dioszegia cryoxerica sp. nov., psychrophilic basidiomycetous yeasts from polar desert soils in Antarctica

USGS Publications Warehouse

Rodriguez, Russell J.; Connell, L.; Redman, R.; Barrett, A.; Iszard, M.; Fonseca, A.

2010-01-01

During a survey of the culturable soil fungal population in samples collected in Taylor Valley, South Victoria Land, Antarctica, 13 basidiomycetous yeast strains with orange-coloured colonies were isolated. Phylogenetic analyses of internal transcribed spacer (ITS) and partial LSU rRNA gene sequences showed that the strains belong to the Dioszegia clade of the Tremellales (Tremellomycetes, Agaricomycotina), but did not correspond to any of the hitherto recognized species. Two novel species, Dioszegia antarctica sp. nov. (type strain ANT-03-116T =CBS 10920T =PYCC 5970T) and Dioszegia cryoxerica sp. nov. (type strain ANT-03-071T =CBS 10919T =PYCC 5967T), are described to accommodate ten and three of these strains, respectively. Analysis of ITS sequences demonstrated intrastrain sequence heterogeneity in D. cryoxerica. The latter species is also notable for producing true hyphae with clamp connections and haustoria. However, no sexual structures were observed. The two novel species can be considered obligate psychrophiles, since they failed to grow above 20 °C and grew best between 10 and 15 °C.

The Epiphytic Fungus Pseudozyma aphidis Induces Jasmonic Acid- and Salicylic Acid/Nonexpressor of PR1-Independent Local and Systemic Resistance1[C][W

PubMed Central

Buxdorf, Kobi; Rahat, Ido; Gafni, Aviva; Levy, Maggie

2013-01-01

Pseudozyma spp. are yeast-like fungi, classified in the Ustilaginales, which are mostly epiphytic or saprophytic and are not pathogenic to plants. Several Pseudozyma species have been reported to exhibit biological activity against powdery mildews. However, previous studies have reported that Pseudozyma aphidis, which can colonize plant surfaces, is not associated with the ‎‎collapse of powdery ‎mildew colonies. In this report, we describe a novel P. aphidis strain and study its interactions with its plant host and the plant pathogen Botrytis cinerea. This isolate was found to secrete extracellular metabolites that inhibit various fungal pathogens in vitro and significantly reduce B. cinerea infection in vivo. Moreover, P. aphidis sensitized Arabidopsis (Arabidopsis thaliana) plants’ defense machinery via local and systemic induction of PATHOGENESIS-RELATED1 (PR1) and PLANT DEFENSIN1.2 (PDF1.2) expression. P. aphidis also reduced B. cinerea infection, locally and systemically, in Arabidopsis mutants impaired in jasmonic acid (JA) or salicylic acid (SA) signaling. Thus, in addition to direct inhibition, P. aphidis may inhibit B. cinerea infection via induced resistance in a manner independent of SA, JA, and Nonexpressor of PR1 (NPR1). P. aphidis primed the plant defense machinery and induced stronger activation of PDF1.2 after B. cinerea infection. Finally, P. aphidis fully or partially reconstituted PR1 and PDF1.2 expression in npr1-1 mutant and in plants with the SA hydroxylase NahG transgene, but not in a jasmonate resistant1-1 mutant, after B. cinerea infection, suggesting that P. aphidis can bypass the SA/NPR1, but not JA, pathway to activate PR genes. Thus, either partial gene activation is sufficient to induce resistance, or the resistance is not directed solely through PR1 and PDF1.2 but probably through other pathogen-resistance genes or pathways as well. PMID:23388119

Usefulness of heterologous promoters in the Pseudozyma flocculosa gene expression system.

PubMed

Avis, Tyler J; Anguenot, Raphaël; Neveu, Bertrand; Bolduc, Sébastien; Zhao, Yingyi; Cheng, Yali; Labbé, Caroline; Belzile, François; Bélanger, Richard R

2008-02-01

The basidiomycetous fungus Pseudozyma flocculosa represents a promising new host for the expression of complex recombinant proteins. Two novel heterologous promoter sequences, the Ustilago maydis glyceraldehyde-3-phosphate dehydrogenase (GPD) and Pseudozyma tsukubaensis alpha-glucosidase promoters, were tested for their ability to provide expression in P. flocculosa. In liquid medium, these two promoters produced lower levels of intracellular green fluorescent protein (GFP) as compared to the U. maydis hsp70 promoter. However, GPD and alpha-glucosidase sequences behaved as constitutive promoters whereas the hsp70 promoter appeared to be morphology-dependent. When using the hsp70 promoter, the expression of GFP increased proportionally to the concentration of hygromycin in the culture medium, indicating possible induction of the promoter by the antibiotic. Optimal solid-state culture conditions were designed for high throughput screening of hygromycin-resistant transformants with the hsp70 promoter in P. flocculosa.

Polyphenolic substrates and dyes degradation by yeasts from 25 de Mayo/King George Island (Antarctica).

PubMed

Rovati, José I; Pajot, Hipólito F; Ruberto, Lucas; Mac Cormack, Walter; Figueroa, Lucía I C

2013-11-01

Antarctica offers a range of extreme climatic conditions, such as low temperatures, high solar radiation and low nutrient availability, and constitutes one of the harshest environments on Earth. Despite that, it has been successfully colonized by ’cold-loving’ fungi, which play a key role in decomposition cycles in cold ecosystems. However, knowledge about the ecological role of yeasts in nutrient or organic matter recycling/mineralization remains highly fragmentary. The aim of this work was to study the yeast microbiota in samples collected on 25 de Mayo/King George Island regarding the scope of their ability to degrade polyphenolic substrates such as lignin and azo dyes. Sixty-one yeast isolates were obtained from 37 samples, including soil, rocks, wood and bones. Molecular analyses based on rDNA sequences revealed that 35 yeasts could be identified at the species level and could be classified in the genera Leucosporidiella, Rhodotorula, Cryptococcus, Bullera and Candida. Cryptococcus victoriae was by far the most ubiquitous species. In total, 33% of the yeast isolates examined showed significant activity for dye decolorization, 25% for laccase activity and 38% for ligninolytic activity. Eleven yeasts did not show positive activity in any of the assays performed and no isolates showed positive activity across all tested substrates. A high diversity of yeasts were isolated in this work, possibly including undescribed species and conspicuous Antarctic yeasts, most of them belonging to oligotrophic, slow-growing and metabolically diverse basidiomycetous genera.

Characterization of Hyaluronan-Degrading Enzymes from Yeasts.

PubMed

Smirnou, Dzianis; Krčmář, Martin; Kulhánek, Jaromír; Hermannová, Martina; Bobková, Lenka; Franke, Lukáš; Pepeliaev, Stanislav; Velebný, Vladimír

2015-10-01

Hyaluronidases (HAases) from yeasts were characterized for the first time. The study elucidated that hyaluronate 4-glycanohydrolase and hyaluronan (HA) lyase can be produced by yeasts. Six yeasts producing HAases were found through express screening of activities. The extracellular HAases from two of the yeast isolates, Pseudozyma aphidis and Cryptococcus laurentii, were characterized among them. P. aphidis HAase hydrolyzed β-1,4 glycosidic bonds of HA, yielding even-numbered oligosaccharides with N-acetyl-D-glucosamine at the reducing end. C. laurentii produced hyaluronan lyase, which cleaved β-1,4 glycosidic bonds of HA in β-elimination reaction, and the products of HA degradation were different-sized even-numbered oligosaccharides. The shortest detected HA oligomer was dimer. The enzymes' pH and temperature optima were pH 3.0 and 37-45 °C (P. aphidis) and pH 6.0 and 37 °C (C. laurentii), respectively. Both HAases showed good thermostability.

Multigene phylogeny and taxonomic revision of yeasts and related fungi in the Ustilaginomycotina.

PubMed

Wang, Q-M; Begerow, D; Groenewald, M; Liu, X-Z; Theelen, B; Bai, F-Y; Boekhout, T

2015-06-01

The subphylum Ustilaginomycotina (Basidiomycota, Fungi) comprises mainly plant pathogenic fungi (smuts). Some of the lineages possess cultivable unicellular stages that are usually classified as yeast or yeast-like species in a largely artificial taxonomic system which is independent from and largely incompatible with that of the smut fungi. Here we performed phylogenetic analyses based on seven genes including three nuclear ribosomal RNA genes and four protein coding genes to address the molecular phylogeny of the ustilaginomycetous yeast species and their filamentous counterparts. Taxonomic revisions were proposed to reflect this phylogeny and to implement the 'One Fungus = One Name' principle. The results confirmed that the yeast-containing classes Malasseziomycetes, Moniliellomycetes and Ustilaginomycetes are monophyletic, whereas Exobasidiomycetes in the current sense remains paraphyletic. Four new genera, namely Dirkmeia gen. nov., Kalmanozyma gen. nov., Golubevia gen. nov. and Robbauera gen. nov. are proposed to accommodate Pseudozyma and Tilletiopsis species that are distinct from the other smut taxa and belong to clades that are separate from those containing type species of the hitherto described genera. Accordingly, new orders Golubeviales ord. nov. with Golubeviaceae fam. nov. and Robbauerales ord. nov. with Robbaueraceae fam. nov. are proposed to accommodate the sisterhood of Golubevia gen. nov. and Robbauera gen. nov. with other orders of Exobasidiomycetes. The majority of the remaining anamorphic yeast species are transferred to corresponding teleomorphic genera based on strongly supported phylogenetic affinities, resulting in the proposal of 28 new combinations. The taxonomic status of a few Pseudozyma species remains to be determined because of their uncertain phylogenetic positions. We propose to use the term pro tempore or pro tem. in abbreviation to indicate the single-species lineages that are temporarily maintained.

Cloning and in-silico analysis of beta-1,3-xylanase from psychrophilic yeast, Glaciozyma antarctica PI12

NASA Astrophysics Data System (ADS)

Nor, Nooraisyah Mohamad; Bakar, Farah Diba Abu; Mahadi, Nor Muhammad; Murad, Abdul Munir Abdul

2015-09-01

A beta-1,3-xylanase (EC 3.2.1.32) gene from psychrophilic yeast, Glaciozyma antarctica has been identified via genome data mining. The enzyme was grouped into GH26 family based on Carbohydrate Active Enzyme (CaZY) database. The molecular weight of this protein was predicted to be 42 kDa and is expected to be soluble for expression. The presence of signal peptide suggested that this enzyme may be released extracellularly into the marine environment of the host's habitat. This supports the theory that such enzymatic activity is required for degradation of nutrients of polysaccharide origins into simpler carbohydrates outside the environment before it could be taken up inside the cell. The sequence for this protein showed very little conservation (< 30%) with other beta-1,3-xylanases from available databases. Based on the phylogenetic analysis, this protein also showed distant relationship to other xylanases from eukaryotic origin. The protein may have undergone major substitution in its gene sequence order to adapt to the cold climate. This is the first report of beta-1,3-xylanase gene isolated from a psychrophilic yeast.

Description of Taphrina antarctica f.a. sp. nov., a new anamorphic ascomycetous yeast species associated with Antarctic endolithic microbial communities and transfer of four Lalaria species in the genus Taphrina.

PubMed

Selbmann, Laura; Turchetti, Benedetta; Yurkov, Andrey; Cecchini, Clarissa; Zucconi, Laura; Isola, Daniela; Buzzini, Pietro; Onofri, Silvano

2014-07-01

In the framework of a large-scale rock sampling in Continental Antarctica, a number of yeasts have been isolated. Two strains that are unable to grow above 20 °C and that have low ITS sequence similarities with available data in the public domain were found. The D1/D2 LSU molecular phylogeny placed them in an isolated position in the genus Taphrina, supporting their affiliation to a not yet described species. Because the new species is able to grow in its anamorphic state only, the species Taphrina antarctica f.a. (forma asexualis) sp. nov. has been proposed to accommodate both strains (type strain DBVPG 5268(T), DSM 27485(T) and CBS 13532(T)). Lalaria and Taphrina species are dimorphic ascomycetes, where the anamorphic yeast represents the saprotrophic state and the teleomorph is the parasitic counterpart on plants. This is the first record for this genus in Antarctica; since plants are absent on the continent, we hypothesize that the fungus may have focused on the saprotrophic part of its life cycle to overcome the absence of its natural host and adapt environmental constrains. Following the new International Code of Nomenclature for Algae, Fungi and Plants (Melbourne Code 2011) the reorganization of Taphrina-Lalaria species in the teleomorphic genus Taphrina is proposed. We emend the diagnosis of the genus Taphrina to accommodate asexual saprobic states of these fungi. Taphrina antarctica was registered in MycoBank under MB 808028.

Extracellular enzymatic activities and physiological profiles of yeasts colonizing fruit trees.

PubMed

Molnárová, Jana; Vadkertiová, Renáta; Stratilová, Eva

2014-07-01

Yeasts form a significant and diverse part of the phyllosphere microbiota. Some yeasts that inhabit plants have been found to exhibit extracellular enzymatic activities. The aim of the present study was to investigate the ability of yeasts isolated from leaves, fruits, and blossoms of fruit trees cultivated in Southwest Slovakia to produce extracellular enzymes, and to discover whether the yeasts originating from these plant organs differ from each other in their physiological properties. In total, 92 strains belonging to 29 different species were tested for: extracellular protease, β-glucosidase, lipase, and polygalacturonase activities; fermentation abilities; the assimilation of xylose, saccharose and alcohols (methanol, ethanol, glycerol); and for growth in a medium with 33% glucose. The black yeast Aureobasidium pullulans showed the largest spectrum of activities of all the species tested. Almost 70% of the strains tested demonstrated some enzymatic activity, and more than 90% utilized one of the carbon compounds tested. Intraspecies variations were found for the species of the genera Cryptococcus and Pseudozyma. Interspecies differences of strains exhibiting some enzymatic activities and utilizing alcohols were also noted. The largest proportion of the yeasts exhibited β-glucosidase activity and assimilated alcohols independently of their origin. The highest number of strains positive for all activities tested was found among the yeasts associated with leaves. Yeasts isolated from blossoms assimilated saccharose and D-xylose the most frequently of all the yeasts tested. The majority of the fruit-inhabiting yeasts grew in the medium with higher osmotic pressure. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Enhanced separation and analysis procedure reveals production of tri-acylated mannosylerythritol lipids by Pseudozyma aphidis.

PubMed

Goossens, Eliane; Wijnants, Marc; Packet, Dirk; Lemière, Filip

2016-11-01

Mannosylerythritol lipids (MELs) are one of the most promising biosurfactants because of their high fermentation yields (>100 g l -1 ) and during the last two decades they have gained a lot of attention due to their interesting self-assembling properties and biological activities. In this study, MELs were produced by fed-batch bioreactor fermentation of rapeseed oil with Pseudozyma aphidis MUCL 27852. This high-level MEL-producing yeast secretes four conventional MEL structures, -A, -B, -C and -D, which differ in their degree of acetylation. During our research, unknown compounds synthesized by P. aphidis were detected by thin-layer chromatography. The unknown compounds were separated by flash chromatography and identified as tri-acylated MELs by high-performance liquid chromatography tandem mass spectrometry (HPLC-MS/MS). The third fatty acid chain on the tri-acylated MELs was positioned on the primary alcohol of the erythritol moiety and comprised long-chain acids, mainly oleic and linoleic acid, which are not found in conventional di-acylated MELs. Furthermore, the LC-MS analysis time of conventional MELs was reduced to almost one-third by switching from HPLC-MS/MS to ultraperformance liquid chromatography tandem mass spectrometry (UPLC-MS/MS). Provided optimization of the fermentation yield, P. aphidis could be an interesting novel producer of tri-acylated MELs and, thereby expand the supply and applicability of biosurfactants.

Structure prediction of Fe(II) 2-oxoglutarate dioxygenase from a psychrophilic yeast Glaciozyma antarctica PI12

NASA Astrophysics Data System (ADS)

Yusof, Nik Yusnoraini; Bakar, Farah Diba Abu; Mahadi, Nor Muhammad; Raih, Mohd Firdaus; Murad, Abdul Munir Abdul

2015-09-01

A cDNA encoding Fe(II) 2-oxoglutarate (2OG) dependent dioxygenases was isolated from psychrophilic yeast, Glaciozyma antarctica PI12. We have successfully amplified 1,029 bp cDNA sequence that encodes 342 amino acid with predicted molecular weight 38 kDa. The prediction protein was analysed using various bioinformatics tools to explore the properties of the protein. Based on a BLAST search analysis, the Fe2OX amino acid sequence showed 61% identity to the sequence of oxoglutarate/iron-dependent oxygenase from Rhodosporidium toruloides NP11. SignalP prediction showed that the Fe2OX protein contains no putative signal peptide, which suggests that this enzyme most probably localised intracellularly.The structure of Fe2OX was predicted by homology modelling using MODELLER9v11. The model with the lowest objective function was selected from hundred models generated using MODELLER9v11. Analysis of the structure revealed the longer loop at Fe2OX from G.antarctica that might be responsible for the flexibility of the structure, which contributes to its adaptation to low temperatures. Fe2OX hold a highly conserved Fe(II) binding HXD/E…H triad motif. The binding site for 2-oxoglutarate was found conserved for Arg280 among reported studies, however the Phe268 was found to be different in Fe2OX.

Yeast activities involved in carbon and nitrogen cycles in Antarctica

USDA-ARS?s Scientific Manuscript database

Antarctica and sub Antarctic regions are characterized by extreme conditions for life such as low temperatures and nutrient availability, high solar radiation and dryness, however, microorganisms from the three domains of life have been found as common inhabitants of soils and waters from those zone...

Distribution and abundance of fungi in the soils of Taylor Valley, Antarctica

USGS Publications Warehouse

Connell, L.; Redman, R.; Craig, S.; Rodriguez, R.

2006-01-01

The occurrence and distribution of culturable fungi in Taylor Valley, Antarctica was assessed in terms of soil habitat. Soil transects throughout the valley revealed differential habitat utilization between filamentous and non-filamentous (yeast and yeast-like) fungi. In addition, there were significant differences in species distribution patterns with respect to soil pH, moisture, distance from marine coastline, carbon, chlorophyll a, salinity, elevation and solar inputs. Filamentous fungal abundance is most closely associated with habitats having higher pH, and soil moistures. These close associations were not found with yeast and yeast-like fungi demonstrating that yeast and yeast-like fungi utilize a broader range of habitat. An intensive survey of the Victoria Land is necessary to gain a better understanding of their role in soil functioning and nutrient cycling processes. ?? 2006 Elsevier Ltd. All rights reserved.

In silico analysis of β-1,3-glucanase from a psychrophilic yeast, Glaciozyma antarctica PI12

NASA Astrophysics Data System (ADS)

Mohammadi, Salimeh; Bakar, Farah Diba Abu; Rabu, Amir; Murad, Abdul Munir Abdul

2014-09-01

1,3-beta-glucanase is an industrially important enzyme having wide range of applications especially in food industry. It is crucial to gain an understanding about the structure and functional aspects of various beta-1,3-glucanase produced from diverse sources. In this, study a cDNA encoding β-1,3-glucanase (GaExg55) was isolated from a psychrophilic yeast, Glaciozyma antarctica PI12. The cDNA sequence has been submitted to Genbank with an accession number (KJ436377). Subsequently, the perdition protein was analyzed using various bioinformatics tools to explore the properties of the protein. GaEXG55 is consisting of 1,440-bp nucleotides encoding 480 amino acid residues. Alignment of the deduced amino acid for GaExg55 with other exo-β-1,3-glucanase available at the NCBI database indicate that deduced amino acids shared a consensus motif NEP, which is signature pattern of GH5 hydrolases. Predicted molecular weight of GaExg55 is 53.66 kDa. GaExg55 sequences possesses signal peptide sequence and it is highly conserved with other fungal exo-beta-1,3 glucanase.

Cloning, expression and crystallisation of SGT1 co-chaperone protein from Glaciozyma antarctica

NASA Astrophysics Data System (ADS)

Yusof, Nur Athirah; Bakar, Farah Diba Abu; Beddoe, Travis; Murad, Abdul Munir Abdul

2013-11-01

Studies on psycrophiles are now in the limelight of today's post genomic era as they fascinate the research and development industries. The discovery from Glaciozyma antarctica, an extreme cold adapted yeast from Antarctica shows promising future to provide cost effective natural sustainable energy and create wider understanding of the property that permits this organisms to adapt to extreme temperature downshift. In plants and yeast, studies show the interaction between SGT1 and HSP90 are essential for disease resistance and heat stress by activating a number of resistance proteins. Here we report for the first time cloning, expression and crystallization of the recombinant SGT1 protein of G. antarctica (rGa_SGT1), a highly conserved eukaryotic protein that interacts with the molecular chaperones HSP90 (heat shock protein 90) apparently associated in a role of co-chaperone that may play important role in cold adaptation. The sequence analysis of rGa_SGT1 revealed the presence of all the characteristic features of SGT1 protein. In this study, we present the outlines and results of protein structural study of G. antarctica SGT1 protein. We validate this approach by starting with cloning the target insert into Ligation Independent Cloning system proceeded with expression using E. coli system, and crystallisation of the target rGA_SGT1 protein. The work is still on going with the target subunit of the complex proteins yielded crystals. These results, still ongoing, open a platform for better understanding of the uniqueness of this crucial molecular machine function in cold adaptation.

Rhodotorula portillonensis sp. nov., a basidiomycetous yeast isolated from Antarctic shallow-water marine sediment.

PubMed

Laich, Federico; Vaca, Inmaculada; Chávez, Renato

2013-10-01

During the characterization of the mycobiota associated with shallow-water marine environments from Antarctic sea, a novel pink yeast species was isolated. Sequence analysis of the D1/D2 domain of the LSU rDNA gene and 5.8S-ITS regions revealed that the isolated yeast was closely related to Rhodotorula pallida CBS 320(T) and Rhodotorula benthica CBS 9124(T). On the basis of morphological, biochemical and physiological characterization and phylogenetic analyses, a novel basidiomycetous yeast species, Rhodotorula portillonensis sp. nov., is proposed. The type strain is Pi2(T) ( = CBS 12733(T)  = CECT 13081(T)) which was isolated from shallow-water marine sediment in Fildes Bay, King George Island, Antarctica.

Molecular Cloning and Optimization for High Level Expression of Cold-Adapted Serine Protease from Antarctic Yeast Glaciozyma antarctica PI12

PubMed Central

Ahmad Mazian, Mu'adz; Salleh, Abu Bakar; Basri, Mahiran; Rahman, Raja Noor Zaliha Raja Abd.

2014-01-01

Psychrophilic basidiomycete yeast, Glaciozyma antarctica strain PI12, was shown to be a protease-producer. Isolation of the PI12 protease gene from genomic and mRNA sequences allowed determination of 19 exons and 18 introns. Full-length cDNA of PI12 protease gene was amplified by rapid amplification of cDNA ends (RACE) strategy with an open reading frame (ORF) of 2892 bp, coded for 963 amino acids. PI12 protease showed low homology with the subtilisin-like protease from fungus Rhodosporidium toruloides (42% identity) and no homology to other psychrophilic proteases. The gene encoding mature PI12 protease was cloned into Pichia pastoris expression vector, pPIC9, and positioned under the induction of methanol-alcohol oxidase (AOX) promoter. The recombinant PI12 protease was efficiently secreted into the culture medium driven by the Saccharomyces cerevisiae α-factor signal sequence. The highest protease production (28.3 U/ml) was obtained from P. pastoris GS115 host (GpPro2) at 20°C after 72 hours of postinduction time with 0.5% (v/v) of methanol inducer. The expressed protein was detected by SDS-PAGE and activity staining with a molecular weight of 99 kDa. PMID:25093119

Classroom Antarctica

ERIC Educational Resources Information Center

Gozzard, David

2017-01-01

Australian company Antarctica Flights runs summer sightseeing trips out of Australian capital cities to tour the Antarctic coast. The Laby Foundation of the University of Melbourne, through its "Classroom Antarctica" program, sponsored Kent Street High School science teacher, Ms Suzy Urbaniak and 18 of her students to take the trip, to…

Phenol degradation and heavy metal tolerance of Antarctic yeasts.

PubMed

Fernández, Pablo Marcelo; Martorell, María Martha; Blaser, Mariana G; Ruberto, Lucas Adolfo Mauro; de Figueroa, Lucía Inés Castellanos; Mac Cormack, Walter Patricio

2017-05-01

In cold environments, biodegradation of organic pollutants and heavy metal bio-conversion requires the activity of cold-adapted or cold-tolerant microorganisms. In this work, the ability to utilize phenol, methanol and n-hexadecane as C source, the tolerance to different heavy metals and growth from 5 to 30 °C were evaluated in cold-adapted yeasts isolated from Antarctica. Fifty-nine percent of the yeasts were classified as psychrotolerant as they could grow in all the range of temperature tested, while the other 41% were classified as psychrophilic as they only grew below 25 °C. In the assimilation tests, 32, 78, and 13% of the yeasts could utilize phenol, n-hexadecane, and methanol as C source, respectively, but only 6% could assimilate the three C sources evaluated. In relation to heavy metals ions, 55, 68, and 80% were tolerant to 1 mM of Cr(VI), Cd(II), and Cu(II), respectively. Approximately a half of the isolates tolerated all of them. Most of the selected yeasts belong to genera previously reported as common for Antarctic soils, but several other genera were also isolated, which contribute to the knowledge of this cold environment mycodiversity. The tolerance to heavy metals of the phenol-degrading cold-adapted yeasts illustrated that the strains could be valuable as inoculant for cold wastewater treatment in extremely cold environments.

Yeasts from sub-Antarctic region: biodiversity, enzymatic activities and their potential as oleaginous microorganisms.

PubMed

Martinez, A; Cavello, I; Garmendia, G; Rufo, C; Cavalitto, S; Vero, S

2016-09-01

Various microbial groups are well known to produce a range of extracellular enzymes and other secondary metabolites. However, the occurrence and importance of investment in such activities have received relatively limited attention in studies of Antarctic soil microbiota. Sixty-one yeasts strains were isolated from King George Island, Antarctica which were characterized physiologically and identified at the molecular level using the D1/D2 region of rDNA. Fifty-eight yeasts (belonging to the genera Cryptococcus, Leucosporidiella, Rhodotorula, Guehomyces, Candida, Metschnikowia and Debaryomyces) were screened for extracellular amylolytic, proteolytic, esterasic, pectinolytic, inulolytic xylanolytic and cellulolytic activities at low and moderate temperatures. Esterase activity was the most common enzymatic activity expressed by the yeast isolates regardless the assay temperature and inulinase was the second most common enzymatic activity. No cellulolytic activity was detected. One yeast identified as Guehomyces pullulans (8E) showed significant activity across six of seven enzymes types tested. Twenty-eight yeast isolates were classified as oleaginous, being the isolate 8E the strain that accumulated the highest levels of saponifiable lipids (42 %).

Structural and functional analysis of a novel psychrophilic β-mannanase from Glaciozyma antarctica PI12

NASA Astrophysics Data System (ADS)

Parvizpour, Sepideh; Razmara, Jafar; Ramli, Aizi Nor Mazila; Md Illias, Rosli; Shamsir, Mohd Shahir

2014-06-01

The structure of a novel psychrophilic β-mannanase enzyme from Glaciozyma antarctica PI12 yeast has been modelled and analysed in detail. To our knowledge, this is the first attempt to model a psychrophilic β-mannanase from yeast. To this end, a 3D structure of the enzyme was first predicted using a threading method because of the low sequence identity (<30 %) using MODELLER9v12 and simulated using GROMACS at varying low temperatures for structure refinement. Comparisons with mesophilic and thermophilic mannanases revealed that the psychrophilic mannanase contains longer loops and shorter helices, increases in the number of aromatic and hydrophobic residues, reductions in the number of hydrogen bonds and salt bridges and numerous amino acid substitutions on the surface that increased the flexibility and its efficiency for catalytic reactions at low temperatures.

Molecular cloning and characterization of alpha - galactosidase gene from Glaciozyma antarctica

NASA Astrophysics Data System (ADS)

Moheer, Reyad Qaed Al; Bakar, Farah Diba Abu; Murad, Abdul Munir Abdul

2015-09-01

Psychrophilic enzymes are proteins produced by psychrophilic organisms which recently are the limelight for industrial applications. A gene encoding α-galactosidase from a psychrophilic yeast, Glaciozyma antarctica PI12 which belongs to glycoside hydrolase family 27, was isolated and analyzed using several bioinformatic tools. The cDNA of the gene with the size of 1,404-bp encodes a protein with 467 amino acid residues. Predicted molecular weight of protein was 48.59 kDa and hence we name the gene encoding α-galactosidase as GAL48. We found that the predicted protein sequences possessed signal peptide sequence and are highly conserved among other fungal α-galactosidase.

Description of Dioszegia patagonica sp. nov., a novel carotenogenic yeast isolated from cold environments.

PubMed

Trochine, Andrea; Turchetti, Benedetta; Vaz, Aline B M; Brandao, Luciana; Rosa, Luiz H; Buzzini, Pietro; Rosa, Carlos; Libkind, Diego

2017-11-01

During a survey of carotenogenic yeasts from cold and oligotrophic environments in Patagonia, several yeasts of the genus Dioszegia (Tremellales, Agaricomycotina) were detected, including three strains that could not be assigned to any known taxa. Analyses of internal transcribed spacer and D1/D2 regions of the large subunit rRNA gene showed these strains are conspecific with several other strains found in the Italian Alps and in Antarctica soil. Phylogenetic analyses showed that 19 of these strains represent a novel yeast species of the genus Dioszegia. The name Dioszegia patagonica sp. nov. is proposed to accommodate these strains and CRUB 1147 T (UFMG 195 T =CBMAI 1564 T =DBVPG 10618 T =CBS 14901 T ; MycoBank MB 819782) was designated as the type strain. This Dioszegia species accumulates biotechnologically valuable compounds such as carotenoid pigments and mycosporines.

Evaluation of yeasts obtained from Antarctic soil samples as biocontrol agents for the management of postharvest diseases of apple (Malus x domestica)

USDA-ARS?s Scientific Manuscript database

Psychrotrophic yeasts isolated from soils collected in Antarctica and selected by its capacity of growing in apple juice at low temperatures were evaluated for their potential as biocontrol agents for the management of postharvest diseases of apple during cold storage. Among the species recovered, ...

Bringing Antarctica Home

ERIC Educational Resources Information Center

Constible, Juanita; Williams, Lauren; Faure, Jaime; Lee, Richard E., Jr.

2012-01-01

When one thinks of the amazing creatures of Antarctica, an insect probably does not come to mind. But this unlikely animal, and a scientific expedition to Antarctica, was the foundation for a learning event that created a community of learners spanning kindergarten through sixth grade and extended beyond the classroom. Miami University's Antarctic…

Antarctica Day: An International Celebration

NASA Astrophysics Data System (ADS)

Pope, A.; Hambrook Berkman, J.; Berkman, P. A.

2013-12-01

For more than half a century, the 1959 Antarctic Treaty continues to shine as a rare beacon of international cooperation. To celebrate this milestone of peace in our civilization with hope and inspiration for future generations, Antarctica Day is celebrated each year on December 1st , the anniversary of the Antarctic Treaty signing. As an annual event - initiated by the Foundation for the Good Governance of International Spaces (www.internationalspaces.org/) in collaboration with the Association of Polar Early Carer Scientists (www.apecs.is) - Antarctica Day encourages participation from around the world. The Antarctic Treaty set aside 10% of the earth, 'forever to be used exclusively for peaceful purposes in the interest of mankind.' It was the first nuclear arms agreement and the first institution to govern all human activities in an international region beyond sovereign jurisdictions. In this spirit, Antarctica Day aims to: - Demonstrate how diverse nations can work together peacefully, using science as a global language of cooperation for decision making beyond national boundaries, - Provide strategies for students learning about Antarctica through art, science and history at all school levels, - Increase collaboration and communication between classrooms, communities, researchers and government officials around the world, and - Provide a focus for polar educators to build on each year. Through close collaboration with a number of partners. Antarctica Day activities have included: a Polar Film Festival convened by The Explorers Club; live sessions connecting classrooms with scientists in Antarctica thanks to PolarTREC and ARCUS; an international activity that involved children from 13 countries who created over 600 flags which exemplify Antarctica Day (these were actually flown in Antarctica with signed certificates then returned to the classes); a map where Antarctica Day participants all over the world could share what they were doing; an Antarctic bird count

Living and Working in Antarctica.

ERIC Educational Resources Information Center

Kemp, Noel

This source book, designed for 11- to 14-year-old students, seeks to describe what life is like in Antarctica. In spite of extreme weather conditions, people go to Antarctica to work every summer. Some of them stay there during the winter as well. This book seeks to supply answers to such questions as: How do people get to Antarctica? Why do they…

Characterization and Inducing Melanoma Cell Apoptosis Activity of Mannosylerythritol Lipids-A Produced from Pseudozyma aphidis

PubMed Central

Fan, Linlin; Li, Hongji; Niu, Yongwu; Chen, Qihe

2016-01-01

Mannosylerythritol lipids (MELs) are natural glycolipid biosurfactants which have potential applications in the fields of food, cosmetic and medicine. In this study, MELs were produced from vegetable oil by Pseudozyma aphidis. Their structural data through LC/MS, GC/MS and NMR analysis revealed that MEL-A with two acetyls was the major compound and the identified homologs of MEL-A contained a length of C8 to C14 fatty acid chains. This glycolipid exhibited a surface tension of 27.69 mN/m at a critical micelle concentration (CMC), self-assembling into particles in the water solution. It was observed to induce cell growth-inhibition and apoptosis of B16 melanoma cells in a dose-dependent manner, as well as cause cell cycle arrest at the S phase. Further quantitative RT-PCR analysis and western blotting revealed an increasing tendency of both mRNA and protein expressions of Caspase-12, CHOP, GRP78 and Caspase-3, and a down-regulation of protein Bcl-2. Combined with the up regulation of signaling IRE1 and ATF6, it can be speculated that MEL-A-induced B16 melanoma cell apoptosis was associated with the endoplasmic reticulum stress (ERS). PMID:26828792

Informal STEM Education in Antarctica

NASA Astrophysics Data System (ADS)

Chell, K.

2010-12-01

Tourism in Antarctica has increased dramatically with tens of thousands of tourists visiting the White Continent each year. Tourism cruises to Antarctica offer a unique educational experience for lay people through informal science-technology-engineering-mathematics (STEM) education. Passengers attend numerous scientific lectures that cover topics such as the geology of Antarctica, plate tectonics, glaciology, and climate change. Furthermore, tourists experience the geology and glaciology first hand during shore excursions. Currently, the grand challenges facing our global society are closely connected to the Earth sciences. Issues such as energy, climate change, water security, and natural hazards, are consistently on the legislative docket of policymakers around the world. However, the majority of the world’s population is uninformed about the role Earth sciences play in their everyday lives. Tourism in Antarctica provides opportunities for informal STEM learning and, as a result, tourists leave with a better understanding and greater appreciation for both Antarctica and Earth sciences.

Tectonics of Antarctica

USGS Publications Warehouse

Hamilton, W.

1967-01-01

Antarctica consists of large and wholly continental east Antarctica and smaller west Antarctica which would form large and small islands, even after isostatic rebound, if its ice cap were melted. Most of east Antarctica is a Precambrian Shield, in much of which charnockites are characteristic. The high Transantarctic Mountains, along the Ross and Weddell Seas, largely follow a geosyncline of Upper Precambrian sedimentary rocks that were deformed, metamorphosed and intruded by granitic rocks during Late Cambrian or Early Ordovician time. The rocks of the orogen were peneplained, then covered by thin and mostly continental Devonian-Jurassic sediments, which were intruded by Jurassic diabase sheets and overlain by plateau-forming tholeiites. Late Cenozoic doming and block-faulting have raised the present high mountains. Northeastern Victoria Land, the end of the Transantarctic Mountains south of New Zealand, preserves part of a Middle Paleozoic orogen. Clastic strata laid unconformably upon the Lower Paleozoic plutonic complex were metamorphosed at low grade, highly deformed and intruded by Late Devonian or Early Carboniferous granodiorites. The overlying Triassic continental sedimentary rocks have been broadly folded and normal-faulted. Interior west Antarctica is composed of miogeosynclinal clastic and subordinate carbonate rocks which span the Paleozoic Era and which were deformed, metamorphosed at generally low grade, and intruded by granitic rocks during Early Mesozoic time and possibly during other times also. Patterns of orogenic belts, if systematic, cannot yet be defined; but fragmentation and rotation of crustal blocks by oroclinal folding and strike-slip faulting can be suggested. The Ellsworth Mountains, for example, consist of Cambrian-Permian metasedimentary rocks that strike northward toward the noncorrelative and latitudinally striking Mesozoic terrane of the Antarctic Peninsula in one direction and southward toward that of the Lower Paleozoic: terrane

Antarctica

Atmospheric Science Data Center

2013-04-16

article title:  Twilight in Antarctica     View larger JPEG ... SpectroRadiometer (MISR) instrument on board Terra. The Ross Ice Shelf and Transantarctic Mountains are illuminated by low Sun. MISR was ...

Pulsating star research from Antarctica

NASA Astrophysics Data System (ADS)

Chadid, Merieme

2017-09-01

This invited talk discusses the pulsating star research from the heart of Antarctica and the scientific polar challenges in the extreme environment of Antarctica, and how the new polar technology could cope with unresolved stellar pulsation enigmas and evolutionary properties challenges towards an understanding of the mysteries of the Universe. PAIX, the first robotic photometer Antarctica program, has been successfully launched during the polar night 2007. This ongoing program gives a new insight to cope with unresolved stellar enigmas and stellar oscillation challenges with a great opportunity to benefit from an access to the best astronomical site on Earth, Dome C. PAIX achieves astrophysical measurement time-series of stellar fields, challenging photometry from space. A continuous and an uninterrupted series of multi-color photometric observations has been collected each polar night - 150 days - without regular interruption, Earth's rotation effect. PAIX shows the first light curve from Antarctica and first step for the astronomy in Antarctica giving new insights in remote polar observing runs and robotic instruments towards a new technology.

Sounding rockets in Antarctica

NASA Technical Reports Server (NTRS)

Alford, G. C.; Cooper, G. W.; Peterson, N. E.

1982-01-01

Sounding rockets are versatile tools for scientists studying the atmospheric region which is located above balloon altitudes but below orbital satellite altitudes. Three NASA Nike-Tomahawk sounding rockets were launched from Siple Station in Antarctica in an upper atmosphere physics experiment in the austral summer of 1980-81. The 110 kg payloads were carried to 200 km apogee altitudes in a coordinated project with Arcas rocket payloads and instrumented balloons. This Siple Station Expedition demonstrated the feasibility of launching large, near 1,000 kg, rocket systems from research stations in Antarctica. The remoteness of research stations in Antarctica and the severe environment are major considerations in planning rocket launching expeditions.

Landsat Image Mosaic of Antarctica (LIMA)

USGS Publications Warehouse

,

2007-01-01

For most of us, Antarctica was at best a distant acquaintance. Now, with the Landsat Image Mosaic of Antarctica (LIMA), we are on intimate terms. In stunning, up-close and personal detail, LIMA brings Antarctica to life. Explore this virtually cloudless, seamless, most geometrically accurate, and highest resolution satellite mosaic of Antarctica. A team of scientists from the U.S. Geological Survey, the British Antarctic Survey, and the National Aeronautics and Space Administration, with funding from the National Science Foundation, created LIMA in support of the International Polar Year (IPY; 2007?08). As the first major scientific outcome of the IPY, LIMA truly fulfills the IPY goals. LIMA is an international effort, supports current scientific polar research, encourages new projects, and helps the general public visualize Antarctica and changes happening in this southernmost environment. Researchers and the general public can download LIMA and all component Landsat scenes at no charge.

Solution structures, dynamics, and ice growth inhibitory activity of peptide fragments derived from an antarctic yeast protein.

PubMed

Shah, Syed Hussinien H; Kar, Rajiv K; Asmawi, Azren A; Rahman, Mohd Basyaruddin A; Murad, Abdul Munir A; Mahadi, Nor M; Basri, Mahiran; Rahman, Raja Noor Zaliha A; Salleh, Abu B; Chatterjee, Subhrangsu; Tejo, Bimo A; Bhunia, Anirban

2012-01-01

Exotic functions of antifreeze proteins (AFP) and antifreeze glycopeptides (AFGP) have recently been attracted with much interest to develop them as commercial products. AFPs and AFGPs inhibit ice crystal growth by lowering the water freezing point without changing the water melting point. Our group isolated the Antarctic yeast Glaciozyma antarctica that expresses antifreeze protein to assist it in its survival mechanism at sub-zero temperatures. The protein is unique and novel, indicated by its low sequence homology compared to those of other AFPs. We explore the structure-function relationship of G. antarctica AFP using various approaches ranging from protein structure prediction, peptide design and antifreeze activity assays, nuclear magnetic resonance (NMR) studies and molecular dynamics simulation. The predicted secondary structure of G. antarctica AFP shows several α-helices, assumed to be responsible for its antifreeze activity. We designed several peptide fragments derived from the amino acid sequences of α-helical regions of the parent AFP and they also showed substantial antifreeze activities, below that of the original AFP. The relationship between peptide structure and activity was explored by NMR spectroscopy and molecular dynamics simulation. NMR results show that the antifreeze activity of the peptides correlates with their helicity and geometrical straightforwardness. Furthermore, molecular dynamics simulation also suggests that the activity of the designed peptides can be explained in terms of the structural rigidity/flexibility, i.e., the most active peptide demonstrates higher structural stability, lower flexibility than that of the other peptides with lower activities, and of lower rigidity. This report represents the first detailed report of downsizing a yeast AFP into its peptide fragments with measurable antifreeze activities.

Solution Structures, Dynamics, and Ice Growth Inhibitory Activity of Peptide Fragments Derived from an Antarctic Yeast Protein

PubMed Central

Asmawi, Azren A.; Rahman, Mohd Basyaruddin A.; Murad, Abdul Munir A.; Mahadi, Nor M.; Basri, Mahiran; Rahman, Raja Noor Zaliha A.; Salleh, Abu B.; Chatterjee, Subhrangsu; Tejo, Bimo A.; Bhunia, Anirban

2012-01-01

Exotic functions of antifreeze proteins (AFP) and antifreeze glycopeptides (AFGP) have recently been attracted with much interest to develop them as commercial products. AFPs and AFGPs inhibit ice crystal growth by lowering the water freezing point without changing the water melting point. Our group isolated the Antarctic yeast Glaciozyma antarctica that expresses antifreeze protein to assist it in its survival mechanism at sub-zero temperatures. The protein is unique and novel, indicated by its low sequence homology compared to those of other AFPs. We explore the structure-function relationship of G. antarctica AFP using various approaches ranging from protein structure prediction, peptide design and antifreeze activity assays, nuclear magnetic resonance (NMR) studies and molecular dynamics simulation. The predicted secondary structure of G. antarctica AFP shows several α-helices, assumed to be responsible for its antifreeze activity. We designed several peptide fragments derived from the amino acid sequences of α-helical regions of the parent AFP and they also showed substantial antifreeze activities, below that of the original AFP. The relationship between peptide structure and activity was explored by NMR spectroscopy and molecular dynamics simulation. NMR results show that the antifreeze activity of the peptides correlates with their helicity and geometrical straightforwardness. Furthermore, molecular dynamics simulation also suggests that the activity of the designed peptides can be explained in terms of the structural rigidity/flexibility, i.e., the most active peptide demonstrates higher structural stability, lower flexibility than that of the other peptides with lower activities, and of lower rigidity. This report represents the first detailed report of downsizing a yeast AFP into its peptide fragments with measurable antifreeze activities. PMID:23209600

Extraction of intracellular protein from Glaciozyma antarctica for proteomics analysis

NASA Astrophysics Data System (ADS)

Faizura, S. Nor; Farahayu, K.; Faizal, A. B. Mohd; Asmahani, A. A. S.; Amir, R.; Nazalan, N.; Diba, A. B. Farah; Muhammad, M. Nor; Munir, A. M. Abdul

2013-11-01

Two preparation methods of crude extracts of psychrophilic yeast Glaciozyma antarctica were compared in order to obtain a good recovery of intracellular proteins. Extraction with mechanical procedures using sonication was found to be more effective for obtaining good yield compare to alkaline treatment method. The procedure is simple, rapid, and produce better yield. A total of 52 proteins were identified by combining both extraction methods. Most of the proteins identified in this study involves in the metabolic process including glycolysis pathway, pentose phosphate pathway, pyruyate decarboxylation and also urea cyle. Several chaperons were identified including probable cpr1-cyclophilin (peptidylprolyl isomerase), macrolide-binding protein fkbp12 and heat shock proteins which were postulate to accelerate proper protein folding. Characteristic of the fundamental cellular processes inferred from the expressed-proteome highlight the evolutionary and functional complexity existing in this domain of life.

In silico analysis of subtilisin from Glaciozyma antarctica PI12

NASA Astrophysics Data System (ADS)

Mustafha, Siti Mardhiah; Murad, Abdul Munir Abdul; Mahadi, Nor Muhammad; Kamaruddin, Shazilah; Bakar, Farah Diba Abu

2015-09-01

Subtilisin constitute as a major player in industrial enzymes that has a wide range of application especially in the detergent industry. In this study, a cDNA encoding for subtilisin (GaSUBT) was extracted from the psychrophilic yeast, Glaciozyma antarctica PI12, PCR amplified and sequenced. Various bioinformatics tools were used to characterize the GaSUBT. GaSUBT contains 1587 bp nucleotides encoding for 529 amino acids. The predicted molecular weight of the deduced protein is 55.34 kDa with an isoelectric point of 6.25. GaSUBT was predicted to possess a signal peptide and pro-peptide consisting of a peptidase inhibitor I9 sequence. From the sequence alignment analysis of deduced amino acids with other subtilisins in the NCBI database showed that the sequences surrounding the catalytic triad that forms the catalytic domain are well conserved.

The Landsat Image Mosaic of Antarctica (LIMA): A Cutting-Edge Way for Students and Teachers to Learn about Antarctica

ERIC Educational Resources Information Center

Campbell, Brian; Bindschadler, Robert

2009-01-01

By studying Antarctica via satellite and through ground-truthing research, we can learn where the ice is melting and why. The Landsat Image Mosaic of Antarctica (LIMA), a new and cutting-edge way for scientists, researchers, educators, students, and the public to look at Antarctica, supports this research and allows for unprecedented views of our…

Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica

DOE Office of Scientific and Technical Information (OSTI.GOV)

Goordial, Jacqueline; Raymond-Bouchard, Isabelle; Riley, Robert

Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.

Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica

DOE PAGES

Goordial, Jacqueline; Raymond-Bouchard, Isabelle; Riley, Robert; ...

2016-03-17

Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.

Solar Eclipses Observed from Antarctica

NASA Astrophysics Data System (ADS)

Pasachoff, Jay M.

2013-01-01

Aspects of the solar corona are still best observed during totality of solar eclipses, and other high-resolution observations of coronal active regions can be observed with radio telescopes by differentiation of occultation observations, as we did with the Jansky Very Large Array for the annular solar eclipse of 2012 May 20 in the US. Totality crossing Antarctica included the eclipse of 2003 November 23, and will next occur on 2021 December 4; annularity crossing Antarctica included the eclipse of 2008 February 7, and will next occur on 2014 April 29. Partial phases as high as 87% coverage were visible and were imaged in Antarctica on 2011 November 25, and in addition to partial phases of the total and annular eclipses listed above, partial phases were visible in Antarctica on 2001 July 2011, 2002 December 4, 2004 April 19, 2006 September 22, 2007 September 11, and 2009 January 26, and will be visible on 2015 September 13, 2016 September 1, 2017 February 26, 2018 February 15, and 2020 December 14. On behalf of the Working Group on Solar Eclipses of the IAU, the poster showed the solar eclipses visible from Antarctica and this article shows a subset (see www.eclipses.info for the full set). A variety of investigations of the Sun and of the response of the terrestrial atmosphere and ionosphere to the abrupt solar cutoff can be carried out at the future eclipses, making the Antarctic observations scientifically useful.

Jovian Antarctica.

NASA Image and Video Library

2017-02-04

Cyclones swirl around the south pole, and white oval storms can be seen near the limb -- the apparent edge of the planet -- in this image of Jupiter's south polar region taken by the JunoCam imager aboard NASA's Juno spacecraft. The image was acquired on February 2, 2017, at 5:52 a.m. PST (8:52 a.m. EST) from an altitude of 47,600 miles (76,600 kilometers) above Jupiter's swirling cloud deck. Prior to the Feb. 2 flyby, the public was invited to vote for their favorite points of interest in the Jovian atmosphere for JunoCam to image. The point of interest captured here was titled "Jovian Antarctica" by a member of the public, in reference to Earth's Antarctica. http://photojournal.jpl.nasa.gov/catalog/PIA21380

Microbial ecology of extreme environments: Antarctic dry valley yeasts and growth in substrate limited habitats

NASA Technical Reports Server (NTRS)

Vishniac, H. S.

1981-01-01

The multiple stresses temperature, moisture, and for chemoheterotrophs, sources of carbon and energy of the Dry Valley Antarctica soils allow at best depauperate communities, low in species diversity and population density. The nature of community structure, the operation of biogeochemical cycles, the evolution and mechanisms of adaptation to this habitat are of interest in informing speculations upon life on other planets as well as in modeling the limits of gene life. Yeasts of the Cryptococcus vishniacil complex (Basidiobiastomycetes) are investigated, as the only known indigenes of the most hostile, lichen free, parts of the Dry Valleys. Methods were developed for isolating these yeasts (methods which do not exclude the recovery of other microbiota). The definition of the complex was refined and the importance of nitrogen sources was established as well as substrate competition in fitness to the Dry Valley habitats.

A cryptic Gondwana-forming orogen located in Antarctica.

PubMed

Daczko, Nathan R; Halpin, Jacqueline A; Fitzsimons, Ian C W; Whittaker, Joanne M

2018-05-30

The most poorly exposed and least understood Gondwana-forming orogen lies largely hidden beneath ice in East Antarctica. Called the Kuunga orogen, its interpolation between scattered outcrops is speculative with differing and often contradictory trends proposed, and no consensus on the location of any sutures. While some discount a suture altogether, paleomagnetic data from Indo-Antarctica and Australo-Antarctica do require 3000-5000 km relative displacement during Ediacaran-Cambrian Gondwana amalgamation, suggesting that the Kuunga orogen sutured provinces of broadly Indian versus Australian affinity. Here we use compiled data from detrital zircons offshore of East Antarctica that fingerprint two coastal subglacial basement provinces between 60 and 130°E, one of Indian affinity with dominant ca. 980-900 Ma ages (Indo-Antarctica) and one of Australian affinity with dominant ca. 1190-1140 and ca. 1560 Ma ages (Australo-Antarctica). We combine this offshore compilation with existing and new onshore U-Pb geochronology and previous geophysical interpretations to delimit the Indo-Australo-Antarctic boundary at a prominent geophysical lineament which intersects the coast east of Mirny at ~94°E.

Combined Gravimetric-Seismic Crustal Model for Antarctica

NASA Astrophysics Data System (ADS)

Baranov, Alexey; Tenzer, Robert; Bagherbandi, Mohammad

2018-01-01

The latest seismic data and improved information about the subglacial bedrock relief are used in this study to estimate the sediment and crustal thickness under the Antarctic continent. Since large parts of Antarctica are not yet covered by seismic surveys, the gravity and crustal structure models are used to interpolate the Moho information where seismic data are missing. The gravity information is also extended offshore to detect the Moho under continental margins and neighboring oceanic crust. The processing strategy involves the solution to the Vening Meinesz-Moritz's inverse problem of isostasy constrained on seismic data. A comparison of our new results with existing studies indicates a substantial improvement in the sediment and crustal models. The seismic data analysis shows significant sediment accumulations in Antarctica, with broad sedimentary basins. According to our result, the maximum sediment thickness in Antarctica is about 15 km under Filchner-Ronne Ice Shelf. The Moho relief closely resembles major geological and tectonic features. A rather thick continental crust of East Antarctic Craton is separated from a complex geological/tectonic structure of West Antarctica by the Transantarctic Mountains. The average Moho depth of 34.1 km under the Antarctic continent slightly differs from previous estimates. A maximum Moho deepening of 58.2 km under the Gamburtsev Subglacial Mountains in East Antarctica confirmed the presence of deep and compact orogenic roots. Another large Moho depth in East Antarctica is detected under Dronning Maud Land with two orogenic roots under Wohlthat Massif (48-50 km) and the Kottas Mountains (48-50 km) that are separated by a relatively thin crust along Jutulstraumen Rift. The Moho depth under central parts of the Transantarctic Mountains reaches 46 km. The maximum Moho deepening (34-38 km) in West Antarctica is under the Antarctic Peninsula. The Moho depth minima in East Antarctica are found under the Lambert Trench (24

Geoethical approach to mineral activities in Antarctica

NASA Astrophysics Data System (ADS)

Talalay, Pavel

2013-04-01

Antarctica is the outermost from civilization space continent. From 14.0 million km2 of surface area about 98% of Antarctica is covered by ice that averages at least 1.6 km in thickness. Geologically, the continent is the least explored in the world, and it is almost absolutely unknown what mineral resources Antarctica has as they are buried in rock that is covered by a thick ice sheet. It is thought to have large and valuable mineral deposits under the ice. This is because of what has been found in samples taken from the small areas of rock that are exposed, and also from what has been found in South Africa and South America. Up until 180 million years ago, Antarctica was a part of the Gondwanaland super continent, attached to South America, the Southern part of Africa, India and Australia, these continents then drifted apart until they reached their current positions. This leads to a possibility that Antarctica may also share some of the mineral wealth of these continents. Right now on the ice-free areas of Antarctica iron ore, chromium, copper, gold, nickel, platinum, coal and hydrocarbons have been found. The Protocol on Environmental Protection to the Antarctic Treaty, also known as the Madrid Protocol, was signed in 1991 by the signatories to the Antarctic Treaty and became law in January 1998. The Protocol provides for comprehensive protection of the Antarctic environment and associated ecosystems and includes a ban on all commercial mining for at least fifty years (this is up for review in 2041). Current climate change and melting ice in Polar Regions is opening up new opportunities to exploit mineral and oil resources. Even Antarctica's weather, ice and distance from any industrialized areas mean that mineral extraction would be extremely expensive and also extremely dangerous, the depletion of mineral recourses on the Earth can reverse banning of mining in Antarctica in future. There is no question that any resource exploitation in Antarctica will cause

Anaerobic Psychrophiles from Lake Zub and Lake Untersee, Antarctica

NASA Technical Reports Server (NTRS)

Townsend, Alisa; Pikuta, Elena V.; Guisler, Melissa; Stahl, Sarah; Hoover, Richard B.

2009-01-01

The study of samples from Antarctica 2008 and 2009 expeditions organized and successfully conducted by Richard Hoover led to the isolation of diverse anaerobic strains with psychrotolerant and psychrophilic physiology. Due to the fact that Lake Untersee has never been subject to microbiological study, this work with the samples has significant and pioneering impact to the knowledge about the biology of this unique ecosystem. Also, the astrobiological significance for the study of these ecosystems is based on new findings of ice covered water systems on other bodies of our solar system. Anaerobic psychrotolerant strain LZ-22 was isolated from a frozen sample of green moss with soils around the rhizosphere collected near Lake Zub in Antarctica. Morphology of strain LZ-22 was observed to be motile, rod shaped and spore-forming cells with sizes 1 x 5-10 micron. This new isolate is a mesophile with the maximum temperature of growth at 40C. Strain LZ-22 is able to live on media without NaCl and in media with up to 7% (w/v) NaCl. It is catalase negative and grows only on sugars with the best growth rate being on lactose. The strain is a neutrophile and grows between pH 5 and 9.0 with the optimum at 7.8. Another two strains UL7-96mG and LU-96m7P were isolated from deep water samples of Lake Untersee. Proteolytic strain LU-96m7P had a truly psychrophilic nature and refused to grow at room temperature. Sugarlytic strain UL7-96mG was found to be psychrotolerant, but its rate of growth at 3C was very high compared with other mesophiles. Two homoacetogenic psychrophilic strains A7AC-96m and AC-DS7 were isolated and purified from samples of Lake Untersee; both of them are able to grow chemolithotrophically on H2+CO2. In the presence of lactate, these strains are able to grow only at 0-18C, and growth at 22C was observed only with yeast extract stimulation. In this paper, physiological and morphological characteristics of novel psychrophilic and psychrotolerant isolates from

Phaeosphaeria deschampsii (Ascomycota): A new parasite species of Deschampsia antarctica (Poaceae) described to Antarctica.

PubMed

Putzke, Jair; Pereira, Antonio B

2016-01-01

This study presents the description of Phaeosphaeria deschampsii, which was found in plant communities from Half Moon Island, South Shetland Archipelago, Antarctica, in February 2014. Many patches of Deschampsia antarctica (Poaceae), the only indigenous Poaceae specie in Antarctic, were found dead, parasitized by a fungi pathogen. Based on the shape of its perithecia, with oblique neck, erumpent in the grass tissues, ascospore form and septation, the specie was identified as new to science.

Cryptococcus fildesensis sp. nov., a psychrophilic basidiomycetous yeast isolated from Antarctic moss.

PubMed

Zhang, Tao; Zhang, Yu-Qin; Liu, Hong-Yu; Su, Jing; Zhao, Li-Xun; Yu, Li-Yan

2014-02-01

Two yeast strains isolated from the moss Chorisodontium aciphyllum from the Fildes Region, King George Island, maritime Antarctica, were classified as members of the genus Cryptococcus based on sequence analyses of the D1/D2 domains of the large subunit rRNA gene and the internal transcribed spacer (ITS) regions. The rRNA gene sequence analyses indicated that the two strains represented a novel species of the genus Cryptococcus, for which the name Cryptococcus fildesensis sp. nov. is proposed (type strain: CPCC 300017(T) = DSM 26442(T) = CBS 12705(T)). The MycoBank number of the novel species is MB 805542.

Crystal structure of fuculose aldolase from the Antarctic psychrophilic yeast Glaciozyma antarctica PI12.

PubMed

Jaafar, Nardiah Rizwana; Littler, Dene; Beddoe, Travis; Rossjohn, Jamie; Illias, Rosli Md; Mahadi, Nor Muhammad; Mackeen, Mukram Mohamed; Murad, Abdul Munir Abdul; Abu Bakar, Farah Diba

2016-11-01

Fuculose-1-phosphate aldolase (FucA) catalyses the reversible cleavage of L-fuculose 1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. This enzyme from mesophiles and thermophiles has been extensively studied; however, there is no report on this enzyme from a psychrophile. In this study, the gene encoding FucA from Glaciozyma antarctica PI12 (GaFucA) was cloned and the enzyme was overexpressed in Escherichia coli, purified and crystallized. The tetrameric structure of GaFucA was determined to 1.34 Å resolution. The overall architecture of GaFucA and its catalytically essential histidine triad are highly conserved among other fuculose aldolases. Comparisons of structural features between GaFucA and its mesophilic and thermophilic homologues revealed that the enzyme has typical psychrophilic attributes, indicated by the presence of a high number of nonpolar residues at the surface and a lower number of arginine residues.

Antarctica: Scientific Journeys from McMurdo to the Pole.

ERIC Educational Resources Information Center

Brand, Judith, Ed.

2002-01-01

This issue of Exploratorium Magazine focuses on Antarctica. Antarctica has one of the most extreme climates in the world with an untouched environment inviting researchers with great opportunities for study. This issue describes the journey of four Exploratorium staff members to frozen Antarctica. Chapters include: (1) "Life at the Bottom of…

Production of Candida antaractica Lipase B Gene Open Reading Frame using Automated PCR Gene Assembly Protocol on Robotic Workcell & Expression in Ethanologenic Yeast for use as Resin-Bound Biocatalyst in Biodiesel Production

USDA-ARS?s Scientific Manuscript database

A synthetic Candida antarctica lipase B (CALB) gene open reading frame (ORF) for expression in yeast was produced using an automated PCR assembly and DNA purification protocol on an integrated robotic workcell. The lycotoxin-1 (Lyt-1) C3 variant gene ORF was added in-frame with the CALB ORF to pote...

The seismic noise environment of Antarctica

DOE PAGES

Anthony, Robert E.; Aster, Richard C.; Wiens, Douglas; ...

2014-11-26

Seismographic coverage of Antarctica prior to 2007 consisted overwhelmingly of a handful of long running and sporadically deployed transient stations, many of which were principally collocated with scientific research stations. Thus, despite very cold temperatures, sunless winters, challenging logistics, and extreme storms, recent developments in polar instrumentation driven by new scientific objectives have opened up the entirety of Antarctica to year–round and continuous seismological observation (e.g., Nyblade et al., 2012).

Antarctica: Cooling or Warming?

NASA Astrophysics Data System (ADS)

Bunde, Armin; Ludescher, Josef; Franzke, Christian

2013-04-01

We consider the 14 longest instrumental monthly mean temperature records from the Antarctica and analyse their correlation properties by wavelet and detrended fluctuation analysis. We show that the stations in the western and the eastern part of the Antarctica show significant long-term memory governed by Hurst exponents close to 0.8 and 0.65, respectively. In contrast, the temperature records at the inner part of the continent (South Pole and Vostok), resemble white noise. We use linear regression to estimate the respective temperature differences in the records per decade (i) for the annual data, (ii) for the summer and (iii) for the winter season. Using a recent approach by Lennartz and Bunde [1] we estimate the respective probabilities that these temperature differences can be exceeded naturally without inferring an external (anthropogenic) trend. We find that the warming in the western part of the continent and the cooling at the South Pole is due to a gradually changes in the cold extremes. For the winter months, both cooling and warming are well outside the 95 percent confidence interval, pointing to an anthropogenic origin. In the eastern Antarctica, the temperature increases and decreases are modest and well within the 95 percent confidence interval. [1] S. Lennartz and A. Bunde, Phys. Rev. E 84, 021129 (2011)

Astronomy in Antarctica

NASA Astrophysics Data System (ADS)

Burton, Michael G.

2010-10-01

Antarctica provides a unique environment for astronomers to practice their trade. The cold, dry and stable air found above the high Antarctic plateau, as well as the pure ice below, offers new opportunities for the conduct of observational astronomy across both the photon and the particle spectrum. The summits of the Antarctic plateau provide the best seeing conditions, the darkest skies and the most transparent atmosphere of any earth-based observing site. Astronomical activities are now underway at four plateau sites: the Amundsen-Scott South Pole Station, Concordia Station at Dome C, Kunlun Station at Dome A and Fuji Station at Dome F, in addition to long duration ballooning from the coastal station of McMurdo, at stations run by the USA, France/Italy, China, Japan and the USA, respectively. The astronomy conducted from Antarctica includes optical, infrared, terahertz and sub-millimetre astronomy, measurements of cosmic microwave background anisotropies, solar astronomy, as well as high energy astrophysics involving the measurement of cosmic rays, gamma rays and neutrinos. Antarctica is also the richest source of meteorites on our planet. An extensive range of site testing measurements have been made over the high plateau sites. In this article, we summarise the facets of Antarctica that are driving developments in astronomy there, and review the results of the site testing experiments undertaken to quantify those characteristics of the Antarctic plateau relevant for astronomical observation. We also outline the historical development of the astronomy on the continent, and then review the principal scientific results to have emerged over the past three decades of activity in the discipline. These range from determination of the dominant frequencies of the 5 min solar oscillation in 1979 to the highest angular scale measurements yet made of the power spectrum of the CMBR anisotropies in 2010. They span through infrared views of the galactic ecology in star

Psychrotolerant Anaerobes from Lake Podprudnoe, Antarctica and Penguin Spheniscus demersus Colony, South Africa

NASA Technical Reports Server (NTRS)

Guisler, Melissa; Pikuta, Elena V.; Townsend, Alisa; Hoover, Richard B.

2009-01-01

The study of a sample collected from a wind-made ice sculpture near Lake Podprudnoe, Antarctica led to the isolation of the psychrotolerant strain ISLP-3. Cells of the new isolate are vibrio-shaped that measure 0.5 x 1.0-3.0 micron in size. Growth occurs within the temperature range 5-35 C with the optimum at 22 C. Salinity range for growth is 0-2 % NaCl with the optimum at 0.25 %. The new isolate grows within a pH range from 6.0 to 9.5 with the optimum at 7.5. Strain ISLP-3 is saccharolytic, growing on the following substrates: D-glucose, D-ribose, D-fructose, D-arabinose, maltose, sucrose, D-trehalose, D-mannose, D-cellobiose, lactose, starch, chitin, triethylamine, N-acetylglucosamine, and urea. The best growth occurred on D-cellobiose. An environmental sample of pond water near a colony of the endemic species of African penguins, Spheniscus demersus, was collected in February 2008 and delivered directly to the Astrobiology laboratory at NSSTC. The microbiological study of this sample led to the isolation of two psychrotolerant strains ARHSd-7G and ARHSd-9G. Both strains are strictly anaerobic bacteria and are able to grow at high pH and low temperatures. The cells of strain ARHSd-7G are motile, vibrio-shaped, spore-forming cells. Optimal growth of this strain occurs at 30 C, 3 % NaCl, and pH 8.9. The isolate ARHSd-7G combines sugarlytic and proteolytic metabolisms, growing on some proteolysis products including peptone and yeast extract and a number of sugars. The second isolate, ARHSd-9G, exhibits thin, elongated rods that measure 0.4 x 3-5 micron. The cells are motile and spore-forming. Optimal growth of strain ARHSd-9G occurs at 30 C, 1.75 % NaCl, and pH 8.5. The strain ARHSd-9G is sugarlytic, growing well on substrates such as D-glucose, sucrose, D-cellobiose, maltose, fructose, D-mannose, and trehalose (the only exception is positive growth on yeast extract). In this report, the physiological and morphological characteristics of the novel psychrotolerant

Byrd Glacier, Antarctica

NASA Image and Video Library

2008-11-17

Byrd Glacier is a major glacier in Antarctica; it drains an extensive area of the polar plateau and flows eastward between the Britannia Range and the Churchill Mountains to discharge into the Ross Ice Shelf. This image is from NASA Terra satellite.

Surface winds over West Antarctica

NASA Astrophysics Data System (ADS)

Bromwich, David

1993-07-01

Five winter months (April-August 1988) of thermal infrared satellite images were examined to investigate the occurrence of dark (warm) signatures across the Ross Ice Shelf in the Antarctic continent. These features are inferred to be generated by katabatic winds that descend from southern Marie Byrd Land and then blow horizontally across the ice shelf. Significant mass is added to this airstream by katabatic winds blowing from the major glaciers that flow through the Transantarctic Mountains from East Antarctica. These negatively buoyant katabatic winds can reach the northwestern edge of the shelf - a horizontal propagation distance of up to 1,000 km - 14 percent of the time. Where the airstream crosses from the ice shelf to the ice-covered Ross Sea, a prominent coastal polynya is formed. Because the downslope buoyancy force is near zero over the Ross Ice Shelf, the northwestward propagation of the katabatic air mass requires pressure gradient support. The study shows that the extended horizontal propagation of this atmospheric density current occurred in conjunction with the passage of synoptic cyclones over the southern Amundsen Sea. These cyclones can strengthen the pressure gradient in the interior of West Antarctica and make the pressure field favorable for northwestward movement of the katabatic winds from West Antarctica across the ice shelf in a geostrophic direction. The glacier winds from East Antarctica are further accelerated by the synoptic pressure gradient, usually undergo abrupt adjustment beyond the exit to the glacier valley, and merge into the mountain-parallel katabatic air mass.

Married to Antarctica.

ERIC Educational Resources Information Center

Monastersky, Richard

1991-01-01

A novel theory about Earth's ancient history is presented. It is proposed that North America and Antarctica once lay side by side for perhaps as long as a billion years. The importance of these continental connections to geology and other disciplines is discussed. (KR)

Dry Valleys, Antarctica

NASA Image and Video Library

2009-11-02

The McMurdo Dry Valleys are a row of valleys west of McMurdo Sound, Antarctica. They are so named because of their extremely low humidity and lack of snow and ice cover. This image was acquired December 8, 2002 by NASA Terra spacecraft.

Glaciers of Antarctica

USGS Publications Warehouse

Williams, Richard S.; Ferrigno, Jane G.

1988-01-01

Of all the world?s continents Antarctica is the coldest, the highest, and the least known. It is one and a half times the size of the United States, and on it lies 91 percent (30,109,800 km3) of the estimated volume of all the ice on Earth. Because so little is known about Antarctic glaciers compared with what is known about glaciers in populated countries, satellite imagery represents a great leap forward in the provision of basic data. From the coast of Antarctica to about 81?south latitude, there are 2,514 Landsat nominal scene centers (the fixed geographic position of the intersection of orbital paths and latitudinal rows). If there were cloud-free images for all these geographic centers, only about 520 Landsat images would be needed to provide complete coverage. Because of cloud cover, however, only about 70 percent of the Landsat imaging area, or 55 percent of the continent, is covered by good quality Landsat images. To date, only about 20 percent of Antarctica has been mapped at scales of 1:250,000 or larger, but these maps do include about half of the coastline. The area of Antarctica that could be planimetrically mapped at a scale of 1:250,000 would be tripled if the available Landsat images were used in image map production. This chapter contains brief descriptions and interpretations of features seen in 62 carefully selected Landsat images or image mosaics. Images were chosen on the basis of quality and interest; for this reason they are far from evenly spaced around the continent. Space limitations allow less than 15 percent of the Landsat imaging area of Antarctica to be shown in the illustrations reproduced in this chapter. Unfortunately, a wealth of glaciological and other features of compelling interest is present in the many hundreds of images that could not be included. To help show some important features beyond the limit of Landsat coverage, and as an aid to the interpretation of certain features seen in the images, 38 oblique aerial photographs

Galileo spacecraft solid-state imaging system view of Antarctica

NASA Technical Reports Server (NTRS)

1990-01-01

Galileo spacecraft solid-state imaging system view of Antarctica was taken during its first encounter with the Earth. This color picture of Antarctica is part of a mosaic of pictures covering the entire polar continent showing the Ross Ice Shelf and its border with the sea and mountains poking through the ice near the McMurdo Station. From top to bottom, the frame looks across about half of Antarctica. View provided by the Jet Propulsion Laboratory (JPL) with alternate number P-37297.

Complete genome sequence of Pseudomonas antarctica PAMC 27494, a bacteriocin-producing psychrophile isolated from Antarctica.

PubMed

Lee, Jaejin; Cho, Yong-Joon; Yang, Jae Young; Jung, You-Jung; Hong, Soon Gyu; Kim, Ok-Sun

2017-10-10

Antimicrobial-producing, cold-adapted microorganisms have great potential for biotechnological applications in food, pharmaceutical, and cosmetic industries. Pseudomonas antarctica PAMC 27494, a psychrophile exhibiting antimicrobial activity, was isolated from an Antarctic freshwater sample. Here we report the complete genome of P. antarctica PAMC 27494. The strain contains a gene cluster encoding microcin B which inhibits DNA regulations by targeting the DNA gyrase. PAMC 27494 may produce R-type pyocins and also contains a complete set of proteins for the biosynthesis of adenosylcobalamin and possibly induces plant growth by supplying pyrroloquinoline quionone molecules. Copyright © 2017 Elsevier B.V. All rights reserved.

Fungi from Admiralty Bay (King George Island, Antarctica) Soils and Marine Sediments.

PubMed

Wentzel, Lia Costa Pinto; Inforsato, Fábio José; Montoya, Quimi Vidaurre; Rossin, Bruna Gomes; Nascimento, Nadia Regina; Rodrigues, André; Sette, Lara Durães

2018-06-19

Extreme environments such as the Antarctic can lead to the discovery of new microbial taxa, as well as to new microbial-derived natural products. Considering that little is known yet about the diversity and the genetic resources present in these habitats, the main objective of this study was to evaluate the fungal communities from extreme environments collected at Aldmiralty Bay (Antarctica). A total of 891 and 226 isolates was obtained from soil and marine sediment samples, respectively. The most abundant isolates from soil samples were representatives of the genera Leucosporidium, Pseudogymnoascus, and a non-identified Ascomycota NIA6. Metschnikowia sp. was the most abundant taxon from marine samples, followed by isolates from the genera Penicillium and Pseudogymnoascus. Many of the genera were exclusive in marine sediment or terrestrial samples. However, representatives of eight genera were found in both types of samples. Data from non-metric multidimensional scaling showed that each sampling site is unique in their physical-chemical composition and fungal community. Biotechnological potential in relation to enzymatic production at low/moderate temperatures was also investigated. Ligninolytic enzymes were produced by few isolates from root-associated soil. Among the fungi isolated from marine sediments, 16 yeasts and nine fungi showed lipase activity and three yeasts and six filamentous fungi protease activity. The present study permitted increasing our knowledge on the diversity of fungi that inhabit the Antarctic, finding genera that have never been reported in this environment before and discovering putative new species of fungi.

Practical analysis of tide gauges records from Antarctica

NASA Astrophysics Data System (ADS)

Galassi, Gaia; Spada, Giorgio

2015-04-01

We have collected and analyzed in a basic way the currently available time series from tide gauges deployed along the coasts of Antarctica. The database of the Permanent Service for Mean Sea Level (PSMSL) holds relative sea level information for 17 stations, which are mostly concentrated in the Antarctic Peninsula (8 out of 17). For 7 of the PSMSL stations, Revised Local Reference (RLR) monthly and yearly observations are available, spanning from year 1957.79 (Almirante Brown) to 2013.95 (Argentine Islands). For the remaining 11 stations, only metric monthly data can be obtained during the time window 1957-2013. The record length of the available time series is not generally exceeding 20 years. Remarkable exceptions are the RLR station of Argentine Island, located in the Antarctic Peninsula (AP) (time span: 1958-2013, record length: 54 years, completeness=98%), and the metric station of Syowa in East Antarctica (1975-2012, 37 years, 92%). The general quality (geographical coverage and length of record) of the time series hinders a coherent geophysical interpretation of the relative sea-level data along the coasts of Antarctica. However, in an attempt to characterize the relative sea level signals available, we have stacked (i.e., averaged) the RLR time series for the AP and for the whole Antarctica. The so obtained time series have been analyzed using simple regression in order to estimate a trend and a possible sea-level acceleration. For the AP, the the trend is 1.8 ± 0.2 mm/yr and for the whole Antarctica it is 2.1 ± 0.1 mm/yr (both during 1957-2013). The modeled values of Glacial Isostatic Adjustment (GIA) obtained with ICE-5G(VM2) using program SELEN, range between -0.7 and -1.6 mm/yr, showing that the sea-level trend recorded by tide gauges is strongly influenced by GIA. Subtracting the average GIA contribution (-1.1 mm/yr) to observed sea-level trend from the two stacks, we obtain 3.2 and 2.9 mm/yr for Antarctica and AP respectively, which are interpreted

Anthropogenic impacts on marine ecosystems in Antarctica.

PubMed

Aronson, Richard B; Thatje, Sven; McClintock, James B; Hughes, Kevin A

2011-03-01

Antarctica is the most isolated continent on Earth, but it has not escaped the negative impacts of human activity. The unique marine ecosystems of Antarctica and their endemic faunas are affected on local and regional scales by overharvesting, pollution, and the introduction of alien species. Global climate change is also having deleterious impacts: rising sea temperatures and ocean acidification already threaten benthic and pelagic food webs. The Antarctic Treaty System can address local- to regional-scale impacts, but it does not have purview over the global problems that impinge on Antarctica, such as emissions of greenhouse gases. Failure to address human impacts simultaneously at all scales will lead to the degradation of Antarctic marine ecosystems and the homogenization of their composition, structure, and processes with marine ecosystems elsewhere. © 2011 New York Academy of Sciences.

Antarctica as a Martian model.

NASA Technical Reports Server (NTRS)

Vishniac, W. V.; Mainzer, S. E.

1973-01-01

Results of a survey of a variety of environments in the dry valleys of Antarctica, ranging from mountain crests to valley floors. The main purpose of the investigation was the determination of active microbial multiplication in the soil. A series of techniques was employed which permitted the detection of bacterial growth in situ. All evidence points to an active growth of micro-organisms in the Antarctic soil in all locations examined. The measurements were supported by electron micrographs of soil films which showed colonial growth covering soil particles. These findings suggest that Antarctica does not serve as a useful model for the Martian environment in evaluating quarantine standards.

Earth - Antarctica Mosaic

NASA Image and Video Library

1996-02-01

This color picture of the limb of the Earth, looking north past Antarctica, is a mosaic of 11 images taken during a ten-minute period near 5:45 p.m. PST Dec. 8, 1990, by NASA’s Galileo imaging system. http://photojournal.jpl.nasa.gov/catalog/PIA00116

Distributions of larval and juvenile/adult stages of the Antarctic myctophid fish, Electrona antarctica, off Wilkes Land in East Antarctica

NASA Astrophysics Data System (ADS)

Moteki, Masato; Fujii, Kentaro; Amakasu, Kazuo; Shimada, Keishi; Tanimura, Atsushi; Odate, Tsuneo

2017-06-01

Myctophid fish are an important component of the Southern Ocean food web because of their very high biomass. This study investigated the spatial distributions of larval and juvenile/adult stages of the Antarctic myctophid Electrona antarctica. Fish were sampled in January 2011 and 2012 on a transect along 140°E and in January 2013 along 110°E using two different opening/closing net systems. In total, 1075 specimens of E. antarctica were collected: 948 larvae, 127 juveniles/adults, and 2 in the transformation stage. Most larvae were collected at 5-200 m depth, with diel vertical migration (DVM) not apparent. Larvae were mainly distributed in the Modified Circumpolar Deep Water (-1.5 °C-2.0 °C). By contrast, an analysis of the echogram at 38 kHz and discrete depth samples implied that juveniles/adults undertook DVM except in the continental slope area (65.5°S). As the distribution of krill is limited to the cold water mass (<-1.5 °C) along the continental slope, E. antarctica and krill populations are spatially separated off Wilkes Land during summer. According to the previously estimated larval period of 30-47 days, E. antarctica may spawn in late November to December in the marginal ice zone or near the sea ice edge. This study suggests that the environment related to sea ice provides a nursery ground for early stage larvae of E. antarctica.

A Novel Adenovirus in Chinstrap Penguins (Pygoscelis antarctica) in Antarctica

PubMed Central

Lee, Sook-Young; Kim, Jeong-Hoon; Park, Yon Mi; Shin, Ok Sarah; Kim, Hankyeom; Choi, Han-Gu; Song, Jin-Won

2014-01-01

Adenoviruses (family Adenoviridae) infect various organ systems and cause diseases in a wide range of host species. In this study, we examined multiple tissues from Chinstrap penguins (Pygoscelis antarctica), collected in Antarctica during 2009 and 2010, for the presence of novel adenoviruses by PCR. Analysis of a 855-bp region of the hexon gene of a newly identified adenovirus, designated Chinstrap penguin adenovirus 1 (CSPAdV-1), showed nucleotide (amino acid) sequence identity of 71.8% (65.5%) with South Polar skua 1 (SPSAdV-1), 71% (70%) with raptor adenovirus 1 (RAdV-1), 71.4% (67.6%) with turkey adenovirus 3 (TAdV-3) and 61% (61.6%) with frog adenovirus 1 (FrAdV-1). Based on the genetic and phylogenetic analyses, CSPAdV-1 was classified as a member of the genus, Siadenovirus. Virus isolation attempts from kidney homogenates in the MDTC-RP19 (ATCC® CRL-8135™) cell line were unsuccessful. In conclusion, this study provides the first evidence of new adenovirus species in Antarctic penguins. PMID:24811321

Petroleum and mineral resources of Antarctica

USGS Publications Warehouse

Kovar, Karel; Behrendt, John Charles

1983-01-01

No known petroleum or mineral resources occur in Antarctica. The data on these subjects have been collected, mainly since the IGY (International Geophysical Year), 1957-58, as a part of other research carried out by geologists and geophysicists from a number of countries. Specific resource-related studies have not been made. Wright and Williams (1974) summarized what was known of Antarctic mineral resources a decade ago.The U.S. Geological Survey has been actively pursuing various investigations in Antarctica since 194 7. In the course of this work and that of our colleagues elsewhere in the United States and in other countries, much information relevant to petroleum and mineral resources has been obtained. Since 1976, modern state-of-the-art multichannel seismic reflection and aeromagnetic surveys by several countries over the continental margin of Antarctica have indicated thick sedimentary basins. However, no offshore drilling beneath the continental shelf has taken place since the DSDP (Deep Sea Drilling Project) holes in the Ross Sea in 1973. Geologic field investigations begun at the turn of the twentieth century have been intensified in the past two decades; most rock outcrops have been visited and samples collected. Technology to exploit resources, particularly in the Arctic, has been developing at a rapid rate, and much of it could be applied to Antarctica. As a result of the petroleum price increases of the past decade, the attention of a number of countries has turned to Antarctica, but under the policy of "voluntary restraint" adopted by the Antarctic Treaty nations, no active petroleum or mineral exploration is taking place. The Antarctic treaty countries are in the process of negotiating an Antarctic mineral resources regime that is anticipated to be completed within the next several years. Therefore it seemed timely to us to readdress the question of petroleum and mineral resources. These reports review and summarize the available information. The

Live from Antarctica: Then and now

NASA Astrophysics Data System (ADS)

This real-time educational video series, featuring Camille Jennings from Maryland Public Television, includes information from Antarctic scientists and interactive discussion between the scientists and school children from both Maryland and Hawaii. This is part of a 'Passport to Knowledge Special' series. In this part of the four part Antarctic series, the history of Antarctica from its founding to the present, its mammals, plants, and other life forms are shown and discussed. The importance of Antarctica as a research facility is explained, along with different experiments and research that the facilities there perform.

Live from Antarctica: Then and Now

NASA Technical Reports Server (NTRS)

1994-01-01

This real-time educational video series, featuring Camille Jennings from Maryland Public Television, includes information from Antarctic scientists and interactive discussion between the scientists and school children from both Maryland and Hawaii. This is part of a 'Passport to Knowledge Special' series. In this part of the four part Antarctic series, the history of Antarctica from its founding to the present, its mammals, plants, and other life forms are shown and discussed. The importance of Antarctica as a research facility is explained, along with different experiments and research that the facilities there perform.

Triassic tetrapods from antarctica: evidence for continental drift.

PubMed

Elliot, D H; Colbert, E H; Breed, W J; Jensen, J A; Powell, J S

1970-09-18

During the austral summer of 1969-1970 bones of Lower Triassic vertebrates were excavated from coarse quartzose sandstones forming stream channel deposits of the Fremouw Formation at Coalsack Bluff, in the Transantarctic Mountains of Antarctica. This is the first assemblage of fossil tetrapods of significant geologic age to be found on the Antarctic Continent. The fossils include labyrinthodont amphibians, presumed thecodont reptiles, and therapsid reptiles, including the definitive genus, Lystrosaurus. This genus is typical of the Lower Triassic of southern Africa, and is also found in India and China. Lystrosaurus and associated vertebrates found in Antarctica were land-living animals: therefore their presence on the South Polar Continent would seem to indicate the contiguity of Antarctica, Africa, and India in Early Triassic times.

Cryoconite and Ice-bubble Microbial Ecosystems in Antarctica

NASA Technical Reports Server (NTRS)

Hoover, Richard B.; Rose, M. Franklin (Technical Monitor)

2000-01-01

During the Antarctica 2000 Expedition samples of rocks and ice bubbles entrained in ice were collected from the blue ice fields near the Moulton Escarpment of the Thiel Mountains (85S, 94W) and the Morris Moraine of the Patriot Hills (80S, 8 1 W) Ellsworth Mountains of Antarctica. Investigation of the microbiota of these cryoconite and ice bubble ecosystems are now being conducted to help refine chemical and morphological biomarkers of potential significance to Astrobiology. The Antarctica 2000 Expedition will be discussed and the preliminary results of the studies of the ice bubble and cryoconite microbial ecosystems discussed. Recent ESEM images of the Antarctic microbiota will be presented a the relevance of ice ecosystems to Astrobiology will be discussed.

Sociocultural Influences on Psychosocial Adjustment in Antarctica

DTIC Science & Technology

1985-12-01

od-; SOCIOCULTURAL INFLUENCES ON PSYCHOSOCIAL ADJUSTMENT IN ANTARCTICA L. A. PALINKAS 00 00 ’n REPORT NO. 85-49 D I MAR ~3 11986 L) L O~flN STAnTEMN...A Apprtoved 6Wz PUbli reIl. NAVAL HEALTH RESEARCH CENTER P.O. BOX 85122 0 SAN DIEGO, CALIFORNIA 92138-9174 --j NAVAL MEDICAL RESEARCH AND DEVELOPMENT ...COMMAND LJ6. BETHESDA, MARYLAND SOCIOCULTURAL INFLUENCES ON PSYCHOSOCIAL ADJUSTMENT IN ANTARCTICA Lawrence A. Palinkas, Ph.D. Manager, Psychiatric

Seismic Constraints on the Mantle Viscosity Structure beneath Antarctica

NASA Astrophysics Data System (ADS)

Wiens, Douglas; Heeszel, David; Aster, Richard; Nyblade, Andrew; Wilson, Terry

2015-04-01

Lateral variations in upper mantle viscosity structure can have first order effects on glacial isostatic adjustment. These variations are expected to be particularly large for the Antarctic continent because of the stark geological contrast between ancient cratonic and recent tectonically active terrains in East and West Antarctica, respectively. A large misfit between observed and predicted GPS rates for West Antarctica probably results in part from the use of a laterally uniform viscosity structure. Although not linked by a simple relationship, mantle seismic velocities can provide important constraints on mantle viscosity structure, as they are both largely controlled by temperature and water content. Recent higher resolution seismic models for the Antarctic mantle, derived from data acquired by new seismic stations deployed in the AGAP/GAMSEIS and ANET/POLENET projects, offer the opportunity to use the seismic velocity structure to place new constraints on the viscosity of the Antarctic upper mantle. We use an Antarctic shear wave velocity model derived from array analysis of Rayleigh wave phase velocities [Heeszel et al, in prep] and examine a variety of methodologies for relating seismic, thermal and rheological parameters to compute a suite of viscosity models for the Antarctic mantle. A wide variety of viscosity structures can be derived using various assumptions, but they share several robust common elements. There is a viscosity contrast of at least two orders of magnitude between East and West Antarctica at depths of 80-250 km, reflecting the boundary between cold cratonic lithosphere in East Antarctica and warm upper mantle in West Antarctica. The region beneath the Ellsworth-Whitmore Mtns and extending to the Pensacola Mtns. shows intermediate viscosity between the extremes of East and West Antarctica. There are also significant variations between different parts of West Antarctica, with the lowest viscosity occurring beneath the Marie Byrd Land (MBL

In Situ Observational Constraints on GIA in Antarctica

NASA Astrophysics Data System (ADS)

Wilson, T. J.; Bevis, M. G.; Kendrick, E. C.; Konfal, S.; Dalziel, I. W.; Smalley, R.; Willis, M. J.; Wiens, D. A.; Heeszel, D. S.

2012-12-01

Geodetic and seismologic data sets have been acquired across a significant portion of Antarctica through deployment of autonomous, remote instrumentation by the Antarctic Network (ANET) project of the Polar Earth Observing Network (POLENET). Continuous GPS measurements of bedrock crustal motions are yielding a synoptic picture of vertical and horizontal crustal motion patterns from the Transantarctic Mountains to the Ellsworth-Whitmore Mountains and Marie Byrd Land regions. Vertical motion patterns are broadly compatible with predictions from current GIA models, but the magnitudes of the vertical motions are substantially lower than predicted. Slower rates of uplift due to GIA can be attributed to factors including errors in ice history, a superposed solid earth response to modern ice mass change, and/or the influence of laterally varying earth properties on the GIA response. Patterns of horizontal motions measured by ANET show that the role of laterally varying earth rheology is extremely important in Antarctica. Crustal motion vectors are closely aligned and document motion from East toward West Antarctica, in contradiction to ice sheet reconstructions placing maximum LGM ice mass loss in West Antarctica and GIA models that predict motions in the opposite direction. When compared to earth structure mapped by seismology, the horizontal crustal motions are consistently near-perpendicular to the very strong gradient in crust and mantle properties, perhaps the first confirmation of predictions from modeling studies that horizontal motions can be deflected or even reversed where such a lateral earth property exists. Accurate GIA models for Antarctica clearly require a laterally-varying earth model and tuning based on these new GPS and seismological constraints.

45 CFR 674.4 - Restrictions on collection of meteorites in Antarctica.

Code of Federal Regulations, 2010 CFR

2010-10-01

... SCIENCE FOUNDATION ANTARCTIC METEORITES § 674.4 Restrictions on collection of meteorites in Antarctica. No person may collect meteorites in Antarctica for other than scientific research purposes. ...

Psychrotolerant anaerobes from Lake Podprudnoye, Antarctica and penguin Spheniscus demersus colony, South Africa

NASA Astrophysics Data System (ADS)

Guisler, Melissa; Pikuta, Elena V.; Townsend, Alisa; Hoover, Richard B.

2009-08-01

The study of a sample collected from a wind-made ice sculpture near Lake Podprudnoe, Antarctica led to the isolation of the psychrotolerant strain ISLP-3. Cells of the new isolate are vibrio-shaped that measure 0.5 x 1.0-3.0 μm in size. Growth occurs within the temperature range 5-35ºC with the optimum at 22 °C. Salinity range for growth is 0-2 % NaCl with the optimum at 0.25 %. The new isolate grows within a pH range from 6.0 to 9.5 with the optimum at 7.5. Strain ISLP-3 is saccharolytic, growing on the following substrates: D-glucose, D-ribose, D-fructose, D-arabinose, maltose, sucrose, D-trehalose, D-mannose, D-cellobiose, lactose, starch, chitin, triethylamine, N-acetylglucosamine, and urea. The best growth occurred on D-cellobiose. An environmental sample of pond water near a colony of the endemic species of African penguins, Spheniscus demersus, was collected in February 2008 and delivered directly to the Astrobiology laboratory at NSSTC. The microbiological study of this sample led to the isolation of two psychrotolerant strains ARHSd-7G and ARHSd-9G. Both strains are strictly anaerobic bacteria and are able to grow at high pH and low temperatures. The cells of strain ARHSd-7G are motile, vibrio-shaped, spore-forming cells. Optimal growth of this strain occurs at 30 ºC, 3 % NaCl, and pH 8.9. The isolate ARHSd-7G combines sugarlytic and proteolytic metabolisms, growing on some proteolysis products including peptone and yeast extract and a number of sugars. The second isolate, ARHSd-9G, exhibits thin, elongated rods that measure 0.4 x 3-5 μm. The cells are motile and spore-forming. Optimal growth of strain ARHSd-9G occurs at 30 ºC, 1.75 % NaCl, and pH 8.5. The strain ARHSd-9G is sugarlytic, growing well on substrates such as D-glucose, sucrose, D-cellobiose, maltose, fructose, D-mannose, and trehalose (the only exception is positive growth on yeast extract). In this report, the physiological and morphological characteristics of the novel

Autumn Cooling of Western East Antarctica Linked to the Tropical Pacific

NASA Astrophysics Data System (ADS)

Clem, Kyle R.; Renwick, James A.; McGregor, James

2018-01-01

Over the past 60 years, the climate of East Antarctica cooled while portions of West Antarctica were among the most rapidly warming regions on the planet. The East Antarctic cooling is attributed to a positive trend in the Southern Annular Mode (SAM) and a strengthening of the westerlies, while West Antarctic warming is tied to zonally asymmetric circulation changes forced by the tropics. This study finds recent (post-1979) surface cooling of East Antarctica during austral autumn to also be tied to tropical forcing, namely, an increase in La Niña events. The recent increase in La Niña conditions forces a Rossby wave into the Southern Hemisphere that increases anticyclonic circulation over the South Atlantic. The South Atlantic anticyclone is associated with cold air advection, weakened northerlies, and increased sea ice concentrations across the western East Antarctic coast, which has increased the rate of cooling at Novolazarevskaya and Syowa stations after 1979. This enhanced cooling over western East Antarctica is tied more broadly to a zonally asymmetric temperature trend pattern across East Antarctica during autumn that is consistent with a tropically forced Rossby wave rather than a SAM pattern; the positive SAM pattern is associated with ubiquitous cooling across East Antarctica, which is not seen in temperature observations after 1979. We conclude that El Niño-Southern Oscillation-related circulation anomalies, particularly zonal asymmetries that locally enhance meridional wind, are an important component of East Antarctic climate variability during autumn, and future changes in tropical Pacific climate will likely have implications for East Antarctica.

Antarctica: Discovery & Exploration.

ERIC Educational Resources Information Center

Gascoigne, Toss; Collett, Peter

An examination of Antarctica, from the first sightings to the heroic explorations of the late 18th and early 19th centuries to modern-day research, is presented in this book. Twelve chapters are as follows: (1) The search begins; (2) Whalers and sealers: bites and nibbles; (3) The new continent: first sight; (4) Wintering: the first party; (5)…

The Impact of Iron Limitation on Remote Sensing Reflectance in Phaeocystis antarctica

NASA Astrophysics Data System (ADS)

Tagliabue, A.; van Dijken, G. L.; Arrigo, K. R.

2006-12-01

The iron limited Southern Ocean is an important controller of the global carbon cycle and is predicted to be heavily impacted by future changes in climate. Such remote regions are heavily reliant on acquiring data from remotely sensed satellite observations of pigment concentrations, via algorithms that utilize bio-optical properties to estimate chlorophyll a concentrations. The haptophyte Phaeocystis antarctica is a key phytoplankton functional group across the Southern Ocean and dominates phytoplankton biomass in the highly productive southwestern Ross Sea. In this study, we examine absorption spectra obtained from laboratory cultures of P. antarctica grown under iron sufficient and deficient conditions. We then utilize a semi-analytical reflectance model, alongside data collected from the Ross Sea, to compare remote sensing reflectance (Rrs) derived from absorption spectra to chlorophyll a. We find that Rrs(490):Rrs(555) per unit chlorophyll a for iron sufficient P. antarctica is consistent with the existing Ross Sea algorithm. However, the increased chlorophyll specific absorption at 490 and 555 nm of iron deficient P. antarctica results in a reduction in Rrs(490):Rrs(555) per unit chlorophyll a. Therefore, remotely sensed chlorophyll a concentrations based on Rrs(490):Rrs(555) will be overestimated when waters dominated by P. antarctica experience iron stress. If remotely sensed chlorophyll a concentrations are erroneously high when P. antarctica is iron limited, then both the magnitude and duration of P. antarctica blooms might have been overestimated. We suggest that an in situ investigation of the P. antarctica Rrs to chlorophyll a relationship is necessary during the onset of iron limitation. The likely causes and broader implications of these conclusions will also be discussed.

The Glaciozyma antarctica genome reveals an array of systems that provide sustained responses towards temperature variations in a persistently cold habitat

PubMed Central

Hashim, Noor Haza Fazlin; Bharudin, Izwan; Abu Bakar, Mohd Faizal; Huang, Kie Kyon; Alias, Halimah; Lee, Bernard K. B.; Mat Isa, Mohd Noor; Mat-Sharani, Shuhaila; Sulaiman, Suhaila; Tay, Lih Jinq; Zolkefli, Radziah; Muhammad Noor, Yusuf; Law, Douglas Sie Nguong; Abdul Rahman, Siti Hamidah; Md-Illias, Rosli; Abu Bakar, Farah Diba; Najimudin, Nazalan; Abdul Murad, Abdul Munir; Mahadi, Nor Muhammad

2018-01-01

Extremely low temperatures present various challenges to life that include ice formation and effects on metabolic capacity. Psyhcrophilic microorganisms typically have an array of mechanisms to enable survival in cold temperatures. In this study, we sequenced and analysed the genome of a psychrophilic yeast isolated in the Antarctic region, Glaciozyma antarctica. The genome annotation identified 7857 protein coding sequences. From the genome sequence analysis we were able to identify genes that encoded for proteins known to be associated with cold survival, in addition to annotating genes that are unique to G. antarctica. For genes that are known to be involved in cold adaptation such as anti-freeze proteins (AFPs), our gene expression analysis revealed that they were differentially transcribed over time and in response to different temperatures. This indicated the presence of an array of adaptation systems that can respond to a changing but persistent cold environment. We were also able to validate the activity of all the AFPs annotated where the recombinant AFPs demonstrated anti-freeze capacity. This work is an important foundation for further collective exploration into psychrophilic microbiology where among other potential, the genes unique to this species may represent a pool of novel mechanisms for cold survival. PMID:29385175

The mantle transition zone beneath Antarctica: Evidence for thermal upwellings and hydration

NASA Astrophysics Data System (ADS)

Nyblade, Andrew; Emry, Erica; Hansen, Samantha; Julia, Jordi; Anandakrishnan, Sridhar; Aster, Richard; Wiens, Douglas; Huerta, Audrey; Wilson, Terry

2015-04-01

West Antarctica has experienced abundant Cenozoic volcanism, and it is suspected that the region is influenced by upwelling thermal plumes from the lower mantle; however this has not yet been verified, because seismic tomography results are not well resolved at mantle transition zone (MTZ) depths. We use P-wave receiver functions (PRFs) from temporary and permanent arrays throughout Antarctica, including the Antarctic POLENET, TAMNET, TAMSEIS, and GAMSEIS arrays, to explore the characteristics of the MTZ beneath the continent. We obtained PRFs for earthquakes occurring at 30-90° with Mb>5.5 using a time-domain iterative deconvolution method filtered with a Gaussian-width of 0.5 and 1.0, corresponding to frequencies less than ~0.24 Hz and ~0.48 Hz, respectively. We combine P receiver functions as single-station and as common conversion point stacks and migrate them to depth using the ak135 1-d velocity model. Results from West Antarctica suggest that the thickness of the MTZ varies throughout the region with thinning beneath the Ruppert Coast of Marie Byrd Land and beneath the Bentley Subglacial Trench and Whitmore Mountains. Also, prominent negative peaks are detected above the transition zone beneath much of West Antarctica and may be evidence for water-induced partial melt above the MTZ. Preliminary results from single-station stacks for the mantle transition zone beneath East Antarctica suggests that one section of East Antarctica, off of the South Pole may have slightly thinned transition zone. Results are forthcoming from the mantle transition zone beneath Victoria Land and the Northern Transantarctics. We propose that the MTZ beneath parts of West Antarctica and possibly also beneath one region of East Antarctica, is hotter than average, possibly due to material upwelling from the lower mantle. Furthermore, we propose that the transition zone beneath much of West Antarctica is water-rich and that upward migration of hydrated material results in formation of

A reference model for crust and uppermost mantle beneath Antarctica

NASA Astrophysics Data System (ADS)

Shen, W.; Wiens, D.; Gerstoft, P.; Bromirski, P. D.; Stephen, R. A.; Aster, R. C.; Nyblade, A.; Winberry, J. P.; Huerta, A. D.; Anandakrishnan, S.; Hansen, S. E.; Wilson, T. J.; Heeszel, D.

2016-12-01

Since the last decade of the 20th Century, over 300 broad-band seismic stations have been deployed across the continent of Antarctica (e.g., temporary networks such as TAMSEIS, AGAP/GAMSEIS, POLENET/ANET, TAMNNET and RIS/DRIS by US geoscientists, as well as stations deployed by other countries). In this presentation, we discuss our recent effort that builds a reference crustal and uppermost mantle shear velocity (Vs) model for continental Antarctica based on those seismic arrays. The data analysis for this effort consists of four steps. First, we compute ambient noise cross-correlations between all possible station pairs and use them to construct Rayleigh wave phase and group velocity maps at a continental scale. Coherence of the new maps with maps generated from teleseismic earthquake data from an earlier study (Heeszel et al., 2016) confirms the high quality of both maps and the minor difference helps quantify the map uncertainties. Second, we compute P receiver function waveforms for each station in Antarctica. Third, we collect Rayleigh waves generated by teleseismic earthquakes and measure their horizontal to vertical (H/V) ratio at each station. Fourth and finally, by combing all seismic measurements from the first three steps together with the phase velocity maps by Heeszel et al.(2016) using a non-linear Monte Carlo (MC) inversion algorithm, we built a 3-D model for the crust and uppermost mantle beneath continental Antarctica and its periphery to a depth of 150 km. This high resolution model, together with associated uncertainty estimates from the MC inversion, serve as a starting point for further improvement and geological interpretation. A variety of tectonic features, including a slower but highly heterogeneous West Antarctica and a much faster East Antarctica, are present in the 3D model. A better image of these features from the 3D model helps further investigation of the thermal and dynamic state of Antarctica's lithosphere and underlying

U.S. and Russia sign agreements to cooperate in Antarctica and Beringia

NASA Astrophysics Data System (ADS)

Showstack, Randy

2012-09-01

U.S. secretary of state Hillary Rodham Clinton and Russian foreign minister Sergey Lavrov signed a Memorandum of Understanding (MOU) for Cooperation in Antarctica and issued a Joint Statement on Pursuing a Transboundary Area of Shared Beringian Heritage, which is related to a segment of the Bering Strait, at an 8 September ceremony in Vladivostok, Russia. The Antarctica MOU strengthens cooperation and improves coordination of bilateral policies, science, logistics, search and rescue, training, and public outreach in Antarctica. “We are formally deepening our scientific cooperation in Antarctica, a continent with vast opportunities for research,” Clinton said. “Scientists from both our countries will work together to explore Antarctica's terrain, study the effects of climate change, and cooperate on a range of issues to better understand and protect our shared environment.” She added that U.S. and Russian officials and scientists will work together to enforce the 1959 Antarctic Treaty, including inspecting foreign facilities and looking for violations of the treaty and environmental commitments.

The future of space - Space tomorrow: The Antarctica model

NASA Technical Reports Server (NTRS)

Beggs, J.

1983-01-01

The exploration and settling of Antarctica with permanent bases are used as illustrative points for establishing a permanent human presence in near-earth space. NASA activities since 1958 have spawned the computer science, solid-state electronics, medical electronics, and communications satellites industries, which are also rapidly expanding in other countries, as are space-faring capabilities. Antarctica is a paradigm for space exploration in that it is hard to reach, hostile to human life, and a great amount of planning is necessary to arrive at the destination and survive. Aircraft made permanent settlements possible on Antarctica, just as the Shuttle does for space. A space station would provide the remote base from which exploration of other planets and settling on the moon could proceed.

Yeast Based Sensors

NASA Astrophysics Data System (ADS)

Shimomura-Shimizu, Mifumi; Karube, Isao

Since the first microbial cell sensor was studied by Karube et al. in 1977, many types of yeast based sensors have been developed as analytical tools. Yeasts are known as facultative anaerobes. Facultative anaerobes can survive in both aerobic and anaerobic conditions. The yeast based sensor consisted of a DO electrode and an immobilized omnivorous yeast. In yeast based sensor development, many kinds of yeast have been employed by applying their characteristics to adapt to the analyte. For example, Trichosporon cutaneum was used to estimate organic pollution in industrial wastewater. Yeast based sensors are suitable for online control of biochemical processes and for environmental monitoring. In this review, principles and applications of yeast based sensors are summarized.

Pituitary-gonadal hormones during prolonged residency in Antarctica.

PubMed

Sawhney, R C; Malhotra, A S; Prasad, R; Pal, K; Kumar, R; Bajaj, A C

1998-08-01

Plasma luteinizing hormone (LH), follicle stimulating hormone (FSH), prolactin (PRL) and testosterone levels were measured in nine eugonadal men in New Delhi and during the 1st week of different months of their stay at Dakshin Gangotri in Antarctica. During their 12-month stay in Antarctica, they were exposed to a severely cold climate, long polar nights and polar days, high wind velocity, increased amounts of solar and ultraviolet radiation and geomagnetism, as well as physical and social isolation. Plasma testosterone tended to increase in March, but a significant increase (P < 0.05) was not seen until April. The mean testosterone levels in May, June, September and November were also significantly higher than the March or New Delhi values. The absolute values of LH, FSH and PRL did not show any month-to-month changes in Antarctica. However, when the hormone levels were expressed as a percentage of the individual annual Antarctic mean, significant differences as a percentage of the individual annual Antarctic mean, significant differences were observed. The testosterone peak in April, May and June was associated with an increase in LH. The nadirs of testosterone, LH, FSH and PRL were seen in either July or August. FSH showed the highest values in March, whereas the highest PRL values were seen in November. These observations suggest the presence of circannual variations in gonadotropin, PRL and LH in Antarctica which are independent of polar days and polar nights. It appears that factors other than the duration of daylight might be involved in regulating these changes. The significance of maintenance of testosterone levels in the supra-physiological range in Antarctica remains unknown but may be important in acclimatization/habituation to the extreme polar cold by increasing basal metabolic rate, protein synthesis and erythropoiesis.

Airborne geophysical study in the pensacola mountains of antarctica

USGS Publications Warehouse

Behrendt, John C.; Meister, L.; Henderson, J.R.

1966-01-01

A seismic reflection, gravity, and aeromagnetic reconnaissance was made in the Pensacola Mountains, Antarctica, during the 1965-66 austral summer. Prominent ice streams located between the Neptune and Patuxent Ranges and east of the Forrestal Range overlie channels in the rock surface 2000 meters below sea level which are probably of glacial origin. Seismic reflections show that the Filchner Ice Shelf is 1270 meters thick near its southern margin. Along the boundary between West and East Antarctica, Bouguer anomalies decrease from +60 milligals in West Antarctica to -80 milligals in East Antarctica. An abrupt change in crustal structure across this boundary is required to explain the 2 milligals per kilometer gradient. This may indicate a fault extending through the crust into the mantle. Aeromagnetic profiles delineate anomalies up to 1800 ?? associated with the basic stratiform intrusion which comprises the Dufek and Forrestal ranges. A probable minimum area of 9500 square kilometers is calculated for the intrusive body on the basis of the magnetic anomalies, making it one of the largest bodies of its type. The extension of this magnetic anomaly across a fault forming the north border of the Pensacola Mountains probably precludes transcurrent movement.

Airborne geophysical study in the pensacola mountains of antarctica.

PubMed

Behrendt, J C; Meister, L; Henderson, J R

1966-09-16

A seismic reflection, gravity, and aeromagnetic reconnaissance was made in the Pensacola Mountains, Antarctica, during the 1965-66 austral summer. Prominent ice streams located between the Neptune and Patuxent Ranges and east of the Forrestal Range overlie channels in the rock surface 2000 meters below sea level which are probably of glacial origin. Seismic reflections show that the Filchner Ice Shelf is 1270 meters thick near its southern margin. Along the boundary between West and East Antarctica, Bouguer anomalies decrease from +60 milligals in West Antarctica to -80 milligals in East Antarctica. An abrupt change in crustal structure across this boundary is required to explainl the 2 milligals per kilometer gradient. This may indicate a fault extending through the crust into the mantle. Aeromagnetic profiles delineate anomalies up to 1800 gamma associated with the basic stratiform intrusion which comprises the Dufek and Forrestal ranges. A probable minimum area of 9500 square kilometers is calculated for the intrusive body on the basis of the magnetic anomalies, making it one of the largest bodies of its type. The extension of this magnetic anominaly across a fault forming the north border of the Pensacola Mountains probably precludes transcurrent movement.

Another bipolar deep-sea anemone: new species of Iosactis (Actiniaria, Endomyaria) from Antarctica

NASA Astrophysics Data System (ADS)

Rodríguez, Estefanía

2012-06-01

A new species of deep-sea burrowing sea anemone is described and illustrated from Antarctica. Iosactis antarctica sp. nov. is characterised by easily deciduous tentacles with sphincters in the base, smooth column, endodermal marginal sphincter, same mesenteries proximally and distally, 24 perfect mesenteries regularly arranged, diffuse retractor musculature and basilar muscles well developed. Iosactis antarctica sp. nov. is the second species of the deep-sea abyssal genus Iosactis; it differs from I. vagabunda in internal anatomy, cnidae and geographic distribution. The description of I. antarctica sp. nov. provides the opportunity to revaluate the morphology of the proximal end of this genus.

Are Deschampsia antarctica Desv. and Colobanthus quitensis (Kunth) Bartl. migratory relicts?

PubMed

Parnikoza, I Yu; Maidanuk, D N; Kozeretska, I A

2007-01-01

It remains unclear why there are only two vascular plant species in Antarctica, Deschampsia antarctica Desv. (Poaceae) and Colobanthus quitensis (Kunth) Bartl. (Caryophyllaceae). Despite progressing climate warming, there is also just one alien plant species found in the region, introduced by humans and spreading mainly in disturbed habitats. In the present article we try to interpret the data concerning the history of the biota and glaciations of the continent, proceeding from the assumption that both plants migrated to Antarctica during the Oligocene-Pliocene, when it was less isolated and the climate was more favorable for their naturalization. Genetic evidence was also taken into consideration. Our data allow suggesting secondary dispersal in the region, due to transfer by birds with regard of climate changes. With this in mind, we believe that D. antarctica and C. quitensis are migratory relicts.

Getting Antarctica down Cold!

ERIC Educational Resources Information Center

Sandmeier, Kay; Greeson, Linda

1990-01-01

Outlines learning activities for applying geography's five fundamental themes to studying Antarctica and points out the learning potential, for studying the economic, historical, and political geography of the continent. Groups activities for grades K-5, 6-8, and 8-12. Stresses cooperative learning in general, and includes a role play activity for…

Antarctica: a review of recent medical research.

PubMed

Olson, James J

2002-10-01

This article reviews recent developments and areas of research in Antarctic medical science. Nineteen nations are part of the Antarctic treaty and undertake research programmes in Antarctica. Medical science is a small but important part of these programmes. Areas that have been studied include aspects of cold physiology, ultraviolet light effects, endocrine changes (including polar T3 syndrome), alterations in immune function, chronobiology, psychology, microbiology, epidemiology and telemedicine. Antarctica has been recognized as the closest thing on Earth to a testing ground for aspects of space exploration and as such has been termed a space analogue.

Earth - Ross Ice Shelf, Antarctica

NASA Image and Video Library

1996-02-09

This color picture of Antarctica is one part of a mosaic of pictures covering the entire Antarctic continent taken during the hours following NASA's Galileo historic first encounter with its home planet. http://photojournal.jpl.nasa.gov/catalog/PIA00117

Live from Antarctica: the Coldest, Windiest Place on Earth

NASA Technical Reports Server (NTRS)

1994-01-01

In this first part of a four part 'Passport to Knowledge Special', hosted by Camille Jennings from Maryland Public Television, children from Maryland and Texas schools had the opportunity to directly interact with and ask questions of scientists and researchers in Antarctica live. The physical characteristics of Antarctica are featured, along with their effects on the human and microbiological organisms living in the region. The reasons behind the clothing worn in the Antarctic and the importance of the meteorological station are featured. Interviews with Professor Ian Dolziel (U of Texas) and Lt. commander John Joseph, NSFA (the head of the Navy Meteorology Center) occur with the school children, along with actual video footage of the surrounding geological features and geography. The 'Weatherops' is located at McMurdo Station, Antarctica.

Live from Antarctica: The coldest, windiest place on Earth

NASA Astrophysics Data System (ADS)

In this first part of a four part 'Passport to Knowledge Special', hosted by Camille Jennings from Maryland Public Television, children from Maryland and Texas schools had the opportunity to directly interact with and ask questions of scientists and researchers in Antarctica live. The physical characteristics of Antarctica are featured, along with their effects on the human and microbiological organisms living in the region. The reasons behind the clothing worn in the Antarctic and the importance of the meteorological station are featured. Interviews with Professor Ian Dolziel (U of Texas) and Lt. commander John Joseph, NSFA (the head of the Navy Meteorology Center) occur with the school children, along with actual video footage of the surrounding geological features and geography. The 'Weatherops' is located at McMurdo Station, Antarctica.

Colony Size of Phaeocystis Antarctica (Prymnesiophyceae) as Influenced by Zooplankton Grazers

EPA Science Inventory

The haptophyte Phaeocystis antarctica is a dominant phytoplankton species in the Ross Sea, Antarctica, and exists as solitary cells and mucilaginous colonies that differ by several orders of magnitude in size. Recent studies with P. globosa suggested that colony formation and enl...

Extracellular Polysaccharides Produced by Yeasts and Yeast-Like Fungi

NASA Astrophysics Data System (ADS)

van Bogaert, Inge N. A.; de Maeseneire, Sofie L.; Vandamme, Erick J.

Several yeasts and yeast-like fungi are known to produce extracellular polysaccharides. Most of these contain D-mannose, either alone or in combination with other sugars or phosphate. A large chemical and structural variability is found between yeast species and even among different strains. The types of polymers that are synthesized can be chemically characterized as mannans, glucans, phosphoman-nans, galactomannans, glucomannans and glucuronoxylomannans. Despite these differences, almost all of the yeast exopolysaccharides display some sort of biological activity. Some of them have already applications in chemistry, pharmacy, cosmetics or as probiotic. Furthermore, some yeast exopolysaccharides, such as pullulan, exhibit specific physico-chemical and rheological properties, making them useful in a wide range of technical applications. A survey is given here of the production, the characteristics and the application potential of currently well studied yeast extracellular polysaccharides.

Yeast Infection (Vaginal)

MedlinePlus

Yeast infection (vaginal) Overview A vaginal yeast infection is a fungal infection that causes irritation, discharge and intense itchiness ... symptoms Causes The fungus candida causes a vaginal yeast infection. Your vagina naturally contains a balanced mix of yeast, including ...

Humus in some soils from Western Antarctica

NASA Astrophysics Data System (ADS)

Abakumov, E.

2009-04-01

Soils of Antarctica are well known as a thick profile soils with low amounts of humus concentrated in the upper layers - O or A horizons. Also there are specific soils of seashore landscapes which affected by penguins guano accumulation and, therefore characterized by high stocks of organic matter in solum. These two types of soils were studied during the Western Antarctica part of 53th Russian Antarctic Expedition in 2008 International Polar Year. These rote of expedition was on Polar stations "Russkaya", "Leningradskaya" and "Bellinsgausen" and also two places, not affected by polar men's - Lindsey Island and Hudson mountains (Ross Sea). Typical soils of "Russkaya" and "Leningradskaya" stations was a Cryosoils with low humus content (0,02 - 0,20 %) which was a product of lichens decaying and further humification. The humus profile was not deep and humic substances migration stopped on the 30 cm deeps maximally. Soils of Sub-Antarctica (Bellinsgausen station, King-George Island) show higher portions of humus which maximum was 3,00 % under the mosses. Humus distribution was more gradual through profile due to the higher thickness of active layer and longer period of biological activity. Soils under the penguin's beaches shows big portions of organic matter, in some cases more than 50 % to total soil mass. Humification starts in first years in cases of Sub-Antarctic guano soils and only after 3-7 years of leaching in seashore Antarctic guano-soils. Soils under the guano layers were extremely reached by nitrogen, and in some cases there were not any plants there due to toxicity of guano. This event was more typical for cold seashore soils of Antarctica. In all cases humus consists mostly of fulvic acids and low molecular non-specific organic acids. The CHA/CFA ratio in all cases were lesser than 1,0 and in more that 50 % of cases it was lesser than 0,5. The investigations conducted shows that the stocks of humus in soil of Antarctica are not estimated and till now we

Potential methane reservoirs beneath Antarctica.

PubMed

Wadham, J L; Arndt, S; Tulaczyk, S; Stibal, M; Tranter, M; Telling, J; Lis, G P; Lawson, E; Ridgwell, A; Dubnick, A; Sharp, M J; Anesio, A M; Butler, C E H

2012-08-30

Once thought to be devoid of life, the ice-covered parts of Antarctica are now known to be a reservoir of metabolically active microbial cells and organic carbon. The potential for methanogenic archaea to support the degradation of organic carbon to methane beneath the ice, however, has not yet been evaluated. Large sedimentary basins containing marine sequences up to 14 kilometres thick and an estimated 21,000 petagrams (1 Pg equals 10(15) g) of organic carbon are buried beneath the Antarctic Ice Sheet. No data exist for rates of methanogenesis in sub-Antarctic marine sediments. Here we present experimental data from other subglacial environments that demonstrate the potential for overridden organic matter beneath glacial systems to produce methane. We also numerically simulate the accumulation of methane in Antarctic sedimentary basins using an established one-dimensional hydrate model and show that pressure/temperature conditions favour methane hydrate formation down to sediment depths of about 300 metres in West Antarctica and 700 metres in East Antarctica. Our results demonstrate the potential for methane hydrate accumulation in Antarctic sedimentary basins, where the total inventory depends on rates of organic carbon degradation and conditions at the ice-sheet bed. We calculate that the sub-Antarctic hydrate inventory could be of the same order of magnitude as that of recent estimates made for Arctic permafrost. Our findings suggest that the Antarctic Ice Sheet may be a neglected but important component of the global methane budget, with the potential to act as a positive feedback on climate warming during ice-sheet wastage.

Distinct Domestication Trajectories in Top-Fermenting Beer Yeasts and Wine Yeasts.

PubMed

Gonçalves, Margarida; Pontes, Ana; Almeida, Pedro; Barbosa, Raquel; Serra, Marta; Libkind, Diego; Hutzler, Mathias; Gonçalves, Paula; Sampaio, José Paulo

2016-10-24

Beer is one of the oldest alcoholic beverages and is produced by the fermentation of sugars derived from starches present in cereal grains. Contrary to lager beers, made by bottom-fermenting strains of Saccharomyces pastorianus, a hybrid yeast, ale beers are closer to the ancient beer type and are fermented by S. cerevisiae, a top-fermenting yeast. Here, we use population genomics to investigate (1) the closest relatives of top-fermenting beer yeasts; (2) whether top-fermenting yeasts represent an independent domestication event separate from those already described; (3) whether single or multiple beer yeast domestication events can be inferred; and (4) whether top-fermenting yeasts represent non-recombinant or recombinant lineages. Our results revealed that top-fermenting beer yeasts are polyphyletic, with a main clade composed of at least three subgroups, dominantly represented by the German, British, and wheat beer strains. Other beer strains were phylogenetically close to sake, wine, or bread yeasts. We detected genetic signatures of beer yeast domestication by investigating genes previously linked to brewing and using genome-wide scans. We propose that the emergence of the main clade of beer yeasts is related with a domestication event distinct from the previously known cases of wine and sake yeast domestication. The nucleotide diversity of the main beer clade more than doubled that of wine yeasts, which might be a consequence of fundamental differences in the modes of beer and wine yeast domestication. The higher diversity of beer strains could be due to the more intense and different selection regimes associated to brewing. Copyright © 2016 Elsevier Ltd. All rights reserved.

45 CFR 674.4 - Restrictions on collection of meteorites in Antarctica.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 45 Public Welfare 3 2011-10-01 2011-10-01 false Restrictions on collection of meteorites in Antarctica. 674.4 Section 674.4 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION ANTARCTIC METEORITES § 674.4 Restrictions on collection of meteorites in Antarctica. No...

Can increasing CO2 cool Antarctica?

NASA Astrophysics Data System (ADS)

Schmithuesen, Holger; Notholt, Justus; König-Langlo, Gert; Lemke, Peter

2014-05-01

CO2 is the strongest anthropogenic forcing agent for climate change since pre-industrial times. Like other greenhouse gases, CO2 absorbs terrestrial surface radiation and causes emission from the atmosphere to space. As the surface is generally warmer than the atmosphere, the total long-wave emission to space is commonly less than the surface emission. However, this does not hold true for the high elevated areas of central Antarctica. Our investigations show, that for the high elevated areas of Antarctica the greenhouse effect (GHE) of CO2 is commonly around zero or even negative. This is based on the quantification of GHE as the difference between long-wave surface emission and top of atmosphere emission. We demonstrate this behaviour with the help of three models: a simple two-layer model, line-by-line calculations, and an ECMWF experiment. Additionally, in this region an increase in CO2 concentration leads to an instantaneous increased long-wave energy loss to space, which is a cooling effect on the earth-atmosphere system. However, short-wave warming by the weak absorption of solar radiation by CO2 are not taken into account here. The reason for this counter-intuitive behaviour is the fact that in the interior of Antarctica the surface is often colder than the stratosphere above. Radiation from the surface in the atmospheric window emitted to space is then relatively lower compared to radiation in the main CO2 band around 15 microns, which originates mostly from the stratosphere. Increasing CO2 concentration leads to increasing emission from the atmosphere to space, while blocking additional portions of surface emission. If the surface is colder than the stratosphere, this leads to additional long-wave energy loss to space for increasing CO2. Our findings for central Antarctica are in strong contrast to the generally known effect that increasing CO2 has on the long-wave emission to space, and hence on the Antarctic climate.

The Landsat Image Mosaic of Antarctica

NASA Astrophysics Data System (ADS)

Bindschadler, R.; Vornberger, P.; Fleming, A.; Fox, A.; Morin, P.

2008-12-01

The first-ever true-color, high-resolution digital mosaic of Antarctica has been produced from nearly 1100 Landsat-7 ETM+ images collected between 1999 and 2003. The Landsat Image Mosaic of Antarctica (LIMA) project was an early benchmark data set of the International Polar Year and represents a close and successful collaboration between NASA, USGS, the British Antarctic Survey and the National Science Foundation. The mosaic was successfully merged with lower resolution MODIS data south of Landsat coverage to produce a complete true-color data set of the entire continent. LIMA is being used as a platform for a variety of education and outreach activities. Central to this effort is the NASA website 'Faces of Antarctica' that offers the web visitor the opportunity to explore the data set and to learn how these data are used to support scientific research. Content is delivered through a set of mysteries designed to pique the user's interest and to motivate them to delve deeper into the website where there are various videos and scientific articles for downloading. Detailed lesson plans written by teachers are provided for classroom use and Java applets let the user track the motion of ice in sequential Landsat images. Web links take the user to other sites where they can roam over the imagery using standard pan and zoom functions, or search for any named feature in the Antarctic Geographic Names data base that returns to the user a centered true-color view of any named feature. LIMA also has appeared is a host of external presentations from museum exhibits, to postcards and large posters. It has attracted various value-added providers that increase LIMA's accessibility by allowing users to specify subsets of the very large data set for individual downloads. The ultimate goal of LIMA in the public and educational sector is to enable everyone to become more familiar with Antarctica.

33 CFR 151.79 - Operating requirements: Discharge of sewage within Antarctica.

Code of Federal Regulations, 2014 CFR

2014-07-01

... of sewage within Antarctica. 151.79 Section 151.79 Navigation and Navigable Waters COAST GUARD... Pollution and Sewage § 151.79 Operating requirements: Discharge of sewage within Antarctica. (a) A vessel... miles of Antarctic land or ice shelves; beyond such distance, sewage stored in a holding tank must not...

33 CFR 151.79 - Operating requirements: Discharge of sewage within Antarctica.

Code of Federal Regulations, 2010 CFR

2010-07-01

... of sewage within Antarctica. 151.79 Section 151.79 Navigation and Navigable Waters COAST GUARD... Pollution and Sewage § 151.79 Operating requirements: Discharge of sewage within Antarctica. (a) A vessel... miles of Antarctic land or ice shelves; beyond such distance, sewage stored in a holding tank must not...

33 CFR 151.79 - Operating requirements: Discharge of sewage within Antarctica.

Code of Federal Regulations, 2013 CFR

2013-07-01

... of sewage within Antarctica. 151.79 Section 151.79 Navigation and Navigable Waters COAST GUARD... Pollution and Sewage § 151.79 Operating requirements: Discharge of sewage within Antarctica. (a) A vessel... miles of Antarctic land or ice shelves; beyond such distance, sewage stored in a holding tank must not...

33 CFR 151.79 - Operating requirements: Discharge of sewage within Antarctica.

Code of Federal Regulations, 2012 CFR

2012-07-01

... of sewage within Antarctica. 151.79 Section 151.79 Navigation and Navigable Waters COAST GUARD... Pollution and Sewage § 151.79 Operating requirements: Discharge of sewage within Antarctica. (a) A vessel... miles of Antarctic land or ice shelves; beyond such distance, sewage stored in a holding tank must not...

33 CFR 151.79 - Operating requirements: Discharge of sewage within Antarctica.

Code of Federal Regulations, 2011 CFR

2011-07-01

... of sewage within Antarctica. 151.79 Section 151.79 Navigation and Navigable Waters COAST GUARD... Pollution and Sewage § 151.79 Operating requirements: Discharge of sewage within Antarctica. (a) A vessel... miles of Antarctic land or ice shelves; beyond such distance, sewage stored in a holding tank must not...

Antarctica: intellectual Armistice Since 1961

DTIC Science & Technology

2015-05-21

exploration and exploitation.101 Antarctic sea ice has increased on average 1.5% per decade between 1979 and 2012 and yet, due to the size of Antarctica...climates, soaring global populations, and expiring international agreements. In particular, regional demands for water in Africa are likely to exceed

Finger blood flow in Antarctica

PubMed Central

Elkington, E. J.

1968-01-01

1. Finger blood flow was estimated, by strain-gauge plethysmography, before and during a 1 hr immersion in ice water, on twenty-five men throughout a year at Wilkes, Antarctica. A total of 121 satisfactory immersions were made. 2. Blood flow before and during immersion decreased significantly in the colder months of the year, and the increase caused by cold-induced vasodilatation (CIVD) became less as the year progressed. The time of onset, blood flow at onset, and frequency of the cycles of CIVD showed no significant relation to the coldness of the weather (as measured by mean monthly wind chill) or the time in months. Comparisons of blood flow before and after five field trips (average duration 42 days), on which cold exposure was more severe than at Wilkes station, gave similar results. 3. The results suggest that vasoconstrictor tone increased. This interpretation agrees with previous work on general acclimatization in Antarctica, but contrasts with work elsewhere on local acclimatization of the hands. PMID:5684034

Antarctica: The Continuing Experiment. Foreign Policy Association Headline Series, No. 273.

ERIC Educational Resources Information Center

Quigg, Philip W.

One of a series of booklets on world issues examines the sharpened differences between those nations that have declared sovereignty over parts of Antarctica and those that have not; between those nations that have arbitrarily assumed responsibility for the administration of Antarctica and the smaller, more numerous nations that believe their…

Results and Error Estimates from GRACE Forward Modeling over Antarctica

NASA Astrophysics Data System (ADS)

Bonin, Jennifer; Chambers, Don

2013-04-01

Forward modeling using a weighted least squares technique allows GRACE information to be projected onto a pre-determined collection of local basins. This decreases the impact of spatial leakage, allowing estimates of mass change to be better localized. The technique is especially valuable where models of current-day mass change are poor, such as over Antarctica. However when tested previously, the least squares technique has required constraints in the form of added process noise in order to be reliable. Poor choice of local basin layout has also adversely affected results, as has the choice of spatial smoothing used with GRACE. To develop design parameters which will result in correct high-resolution mass detection and to estimate the systematic errors of the method over Antarctica, we use a "truth" simulation of the Antarctic signal. We apply the optimal parameters found from the simulation to RL05 GRACE data across Antarctica and the surrounding ocean. We particularly focus on separating the Antarctic peninsula's mass signal from that of the rest of western Antarctica. Additionally, we characterize how well the technique works for removing land leakage signal from the nearby ocean, particularly that near the Drake Passage.

Survival and Recovery of Phaeocystis Antarctica (Prymnesiophyceae) from Prolonged Darkness and Freezing

EPA Science Inventory

The colony-forming haptophyte Phaeocystis antarctica is an important primary producer in the Ross Sea, and must survive long periods of darkness and freezing in this extreme environment. We conducted experiments on the responses of P. antarctica-dominated phytoplankton assemblage...

Antarctica--the Ultimate Summer Institute.

ERIC Educational Resources Information Center

Van Wey, Nate J.

1995-01-01

Describes personal experiences of a participant in the National Science Foundation program, Teachers Experiencing Antarctica. Uses the study of the temperature history of Taylor Dome to provide teachers with the experience of research and help other teachers recognize that there are opportunities outside the classroom for personal and professional…

A web service framework for astronomical remote observation in Antarctica by using satellite link

NASA Astrophysics Data System (ADS)

Jia, M.-h.; Chen, Y.-q.; Zhang, G.-y.; Jiang, P.; Zhang, H.; Wang, J.

2018-07-01

Many telescopes are deployed in Antarctica as it offers excellent astronomical observation conditions. However, because Antarctica's environment is harsh to humans, remote operation of telescope is necessary for observation. Furthermore, communication to devices in Antarctica through satellite link with low bandwidth and high latency limits the effectiveness of remote observation. This paper introduces a web service framework for remote astronomical observation in Antarctica. The framework is based on Python Tornado. RTS2-HTTPD and REDIS are used as the access interface to the telescope control system in Antarctica. The web service provides real-time updates through WebSocket. To improve user experience and control effectiveness under the poor satellite link condition, an agent server is deployed in the mainland to synchronize the Antarctic server's data and send it to domestic users in China. The agent server will forward the request of domestic users to the Antarctic master server. The web service was deployed and tested on Bright Star Survey Telescope (BSST) in Antarctica. Results show that the service meets the demands of real-time, multiuser remote observation and domestic users have a better experience of remote operation.

45 CFR 674.4 - Restrictions on collection of meteorites in Antarctica.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 45 Public Welfare 3 2012-10-01 2012-10-01 false Restrictions on collection of meteorites in Antarctica. 674.4 Section 674.4 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION ANTARCTIC METEORITES § 674.4 Restrictions on collection of meteorites in Antarctica. No person may collect meteorites in...

45 CFR 674.4 - Restrictions on collection of meteorites in Antarctica.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 45 Public Welfare 3 2014-10-01 2014-10-01 false Restrictions on collection of meteorites in Antarctica. 674.4 Section 674.4 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION ANTARCTIC METEORITES § 674.4 Restrictions on collection of meteorites in Antarctica. No person may collect meteorites in...

45 CFR 674.4 - Restrictions on collection of meteorites in Antarctica.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 45 Public Welfare 3 2013-10-01 2013-10-01 false Restrictions on collection of meteorites in Antarctica. 674.4 Section 674.4 Public Welfare Regulations Relating to Public Welfare (Continued) NATIONAL SCIENCE FOUNDATION ANTARCTIC METEORITES § 674.4 Restrictions on collection of meteorites in Antarctica. No person may collect meteorites in...

Molecular Cytogenetic Analysis of Deschampsia antarctica Desv. (Poaceae), Maritime Antarctic.

PubMed

Amosova, Alexandra V; Bolsheva, Nadezhda L; Samatadze, Tatiana E; Twardovska, Maryana O; Zoshchuk, Svyatoslav A; Andreev, Igor O; Badaeva, Ekaterina D; Kunakh, Viktor A; Muravenko, Olga V

2015-01-01

Deschampsia antarctica Desv. (Poaceae) (2n = 26) is one of the two vascular plants adapted to the harshest environment of the Antarctic. Although the species is a valuable model for study of environmental stress tolerance in plants, its karyotype is still poorly investigated. We firstly conducted a comprehensive molecular cytogenetic analysis of D. antarctica collected on four islands of the Maritime Antarctic. D. antarctica karyotypes were studied by Giemsa C- and DAPI/C-banding, Ag-NOR staining, multicolour fluorescence in situ hybridization with repeated DNA probes (pTa71, pTa794, telomere repeats, pSc119.2, pAs1) and the GAA simple sequence repeat probe. We also performed sequential rapid in situ hybridization with genomic DNA of D. caespitosa. Two chromosome pairs bearing transcriptionally active 45S rDNA loci and five pairs with 5S rDNA sites were detected. A weak intercalary site of telomere repeats was revealed on the largest chromosome in addition to telomere hybridization signals at terminal positions. This fact confirms indirectly the hypothesis that chromosome fusion might have been the cause of the unusual for cereals chromosome number in this species. Based on patterns of distribution of the examined molecular cytogenetic markers, all chromosomes in karyotypes were identified, and chromosome idiograms of D. antarctica were constructed. B chromosomes were found in most karyotypes of plants from Darboux Island. A mixoploid plant with mainly triploid cells bearing a Robertsonian rearrangement was detected among typical diploid specimens from Great Jalour Island. The karyotype variability found in D. antarctica is probably an expression of genome instability induced by environmental stress factors. The differences in C-banding patterns and in chromosome distribution of rDNA loci as well as homologous highly repeated DNA sequences detected between genomes of D. antarctica and its related species D. caespitosa indicate that genome reorganization involving

Molecular Cytogenetic Analysis of Deschampsia antarctica Desv. (Poaceae), Maritime Antarctic

PubMed Central

Amosova, Alexandra V.; Bolsheva, Nadezhda L.; Samatadze, Tatiana E.; Twardovska, Maryana O.; Zoshchuk, Svyatoslav A.; Andreev, Igor O.; Badaeva, Ekaterina D.; Kunakh, Viktor A.; Muravenko, Olga V.

2015-01-01

Deschampsia antarctica Desv. (Poaceae) (2n = 26) is one of the two vascular plants adapted to the harshest environment of the Antarctic. Although the species is a valuable model for study of environmental stress tolerance in plants, its karyotype is still poorly investigated. We firstly conducted a comprehensive molecular cytogenetic analysis of D. antarctica collected on four islands of the Maritime Antarctic. D. antarctica karyotypes were studied by Giemsa C- and DAPI/C-banding, Ag-NOR staining, multicolour fluorescence in situ hybridization with repeated DNA probes (pTa71, pTa794, telomere repeats, pSc119.2, pAs1) and the GAA simple sequence repeat probe. We also performed sequential rapid in situ hybridization with genomic DNA of D. caespitosa. Two chromosome pairs bearing transcriptionally active 45S rDNA loci and five pairs with 5S rDNA sites were detected. A weak intercalary site of telomere repeats was revealed on the largest chromosome in addition to telomere hybridization signals at terminal positions. This fact confirms indirectly the hypothesis that chromosome fusion might have been the cause of the unusual for cereals chromosome number in this species. Based on patterns of distribution of the examined molecular cytogenetic markers, all chromosomes in karyotypes were identified, and chromosome idiograms of D. antarctica were constructed. B chromosomes were found in most karyotypes of plants from Darboux Island. A mixoploid plant with mainly triploid cells bearing a Robertsonian rearrangement was detected among typical diploid specimens from Great Jalour Island. The karyotype variability found in D. antarctica is probably an expression of genome instability induced by environmental stress factors. The differences in C-banding patterns and in chromosome distribution of rDNA loci as well as homologous highly repeated DNA sequences detected between genomes of D. antarctica and its related species D. caespitosa indicate that genome reorganization involving

It’s good to be big--- Phaeocystis antarctica colony size under the influence of zooplankton grazers

EPA Science Inventory

The haptophyte Phaeocystis antarctica forms extremely dense accumulations in the Ross Sea, Antarctica, and accounts for over 60% of the seasonal primary production. Similar to the Phaeocystis species in the northern hemisphere, P. antarctica exists as solitary cells and mucilagin...

IT’S GOOD TO BE BIG—PHAEOCYSTIS ANTARCTICA COLONY SIZE UNDER THE INFLUENCE OF ZOOPLANKTON GRAZERS

EPA Science Inventory

The haptophyte Phaeocystis antarctica forms extremely dense accumulations in the Ross Sea, Antarctica, and accounts for over 60% of the seasonal primary production. Similar to the Phaeocystis species in the northern hemisphere, P. antarctica exists as solitary cells and mucilagin...

Special offer-7 days fly and drive Antarctica: The role of wilderness protection in deciding whether (semi) permanent tourist facilities in Antarctica should be prohibited

Treesearch

Kees Bastmeijer

2007-01-01

Antarctica is often described as one of the world’s last wildernesses. Since 1990, tourism to this wilderness is developing rapidly. In a period of 15 years, the number of tourists that make landings in Antarctica has increased from 2,500 (1990/91) to more than 23,000 (2004/05). The diversity of tourist activities is also increasing. The 1991 Protocol on Environmental...

Declassified Intelligence Satellite Photography (DISP) Coverage of Antarctica

NASA Technical Reports Server (NTRS)

Bindschadler, Robert; Seider, Wendy

1998-01-01

This report summarizes the results of a nine-week summer project examining all Declassified Intelligence Satellite Photography (DISP) of Antarctica. It was discovered that the data were collected in three separate missions during 1962 and 1963. The first two missions covered only the coastal areas, while the third mission covered the entire continent. Many of the 1782 frames collected were cloudy. This is especially true of West Antarctica. An optimal set of photographs covering the entire Antarctic coastline is identified along with some examples that show changes in the coastline which have occurred since the early 1960s.

Tectonic evolution of west Antarctica and its relation to east Antarctica

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dalziel, I.W.D.

1987-05-01

West Antarctica consists of five major blocks of continental crust separated by deep sub-ice basins. Marie Byrd Land appears to have been rifted off the adjacent margin of the East Antarctic craton along the line of the Transantarctic Mountains during the Mesozoic. Ellsworth-Whitmore mountains and Haag Nunataks blocks were also rifted from the margin of the craton. They appear to have moved together with the Antarctic Peninsula and Thurston Island blocks, segments of a Pacific margin Mesozoic-Cenozoic magmatic arc, during the Mesozoic opening of the Weddell Sea basin. Paleomagnetic data suggest that all four of these blocks remained attached tomore » western Gondwanaland (South America-Africa) until approximately 125 m.y. ago, and that the present geographic configuration of the Antarctic continent was essentially complete by the mid-Cretaceous, although important Cenozoic rifting has also occurred. Fragmentation of the Gondwanaland supercontinent was preceded in the Middle to Late Jurassic by an important and widespread thermal event of uncertain origin that resulted in the emplacement of an extensive bimodal igneous suite in South America, Africa, Antarctica, and Australia. This was associated with the development of the composite back-arc basin along the western margin of South America. Inversion of this basin in the mid-Cretaceous initiated Andean orogenesis. The presentation will include new data from the joint US-UK West Antarctic Tectonics Project.« less

Novel Avulaviruses in Penguins, Antarctica.

PubMed

Neira, Víctor; Tapia, Rodrigo; Verdugo, Claudio; Barriga, Gonzalo; Mor, Sunil; Ng, Terry Fei Fan; García, Victoria; Del Río, José; Rodrigues, Pedro; Briceño, Cristóbal; Medina, Rafael A; González-Acuña, Daniel

2017-07-01

We identified 3 novel and distinct avulaviruses from Gentoo penguins sampled in Antarctica. We isolated these viruses and sequenced their complete genomes; serologic assays demonstrated that the viruses do not have cross-reactivity between them. Our findings suggest that these 3 new viruses represent members of 3 novel avulavirus species.

Organic carbon stocks in permafrost-affected soils from Admiralty Bay, Antarctica

USGS Publications Warehouse

Simas, F.N.B.; Schaefer, C.E.G.R.; Mendonça, E.S.; Silva, I.R.; Santana, R.M.; Ribeiro, A.S.S.

2007-01-01

Recent works show that organic matter accumulation in some soils from coastal Antarctica is higher than previously expected. The objective of the present work was to estimate the organic C stocks for soils from maritime Antarctica. Cryosols from subpolar desert landscapes presented the lowest organic C stocks. Ornithogenic soils are the most important C reservoirs in terrestrial ecosystems in this part of Antarctica. Although these soils correspond to only 2.5 % of the ice-free areas at Admiralty Bay, they contain approximately 20 % of the estimated C stock. Most of the organic C in the studied soils is stored in the active layer but in some cases the C is also stored in the permafrost.

Antarctica: As seismic as other plates

NASA Astrophysics Data System (ADS)

Richman, Barbara T.

Antarctica shakes, rattles, and rolls just as much as other slow-moving plates. Emile Okal, a Yale University seismologist, told colleagues at the AGU Fall Meeting that although the Antarctic plate is not moving across the earth as fast as other continents, it has a seismicity similar to other plates. His findings refute the claim that a ring of spreading ridges that surrounds the plate leaves Antarctica stress free.The small number of reports of plate seismicity, Okal explained, has been used to argue that the ridges that surround the plate are unable to transmit tectonic stresses and would make the Antarctic plate motionless and free of seismic stress. However, when Okal added up the total seismic energy released during the last 55 years, he found it similar to that of the African plate, which is comparable in size.

Where does CO2 in Antarctica cool the atmosphere ?

NASA Astrophysics Data System (ADS)

Schmithüsen, Holger; Notholt, Justus; König-Langlo, Gert; Lemke, Peter; Jung, Thomas

2016-04-01

In a recent study we have shown that for the high altitude plateau in Antarctica CO2 causes a surplus in infrared emission to space compared to what is emitted from the surface. This corresponds to a negative greenhouse effect, and is due to the fact that for this region the surface is typically colder than the atmosphere above, opposite to the rest of the world. As a consequence, for this region an increase in CO2 leads to an increase in the energy loss to space, leading to an increase in the negative greenhouse effect. We now studied in more detail the radiative effect of CO2 and compared the results with available measurements from Antarctica. H. Schmithüsen, J. Notholt, G. Köngig-Langlo, T, Jung. How increasing CO2 leads to an increased negative greenhouse effect in Antarctica. Geophysical Research Letters, in press, 2015. doi: 10.1002/2015GL066749.

Influence of Persistent Wind Scour on the Surface Mass Balance of Antarctica

NASA Technical Reports Server (NTRS)

Das, Indrani; Bell, Robin E.; Scambos, Ted A.; Wolovick, Michael; Creyts, Timothy T.; Studinger, Michael; Fearson, Nicholas; Nicolas, Julien P.; Lenaerts, Jan T. M.; vandenBroeke, Michiel R.

2013-01-01

Accurate quantification of surface snow accumulation over Antarctica is a key constraint for estimates of the Antarctic mass balance, as well as climatic interpretations of ice-core records. Over Antarctica, near-surface winds accelerate down relatively steep surface slopes, eroding and sublimating the snow. This wind scour results in numerous localized regions (< or = 200 sq km) with reduced surface accumulation. Estimates of Antarctic surface mass balance rely on sparse point measurements or coarse atmospheric models that do not capture these local processes, and overestimate the net mass input in wind-scour zones. Here we combine airborne radar observations of unconformable stratigraphic layers with lidar-derived surface roughness measurements to identify extensive wind-scour zones over Dome A, in the interior of East Antarctica. The scour zones are persistent because they are controlled by bedrock topography. On the basis of our Dome A observations, we develop an empirical model to predict wind-scour zones across the Antarctic continent and find that these zones are predominantly located in East Antarctica. We estimate that approx. 2.7-6.6% of the surface area of Antarctica has persistent negative net accumulation due to wind scour, which suggests that, across the continent, the snow mass input is overestimated by 11-36.5 Gt /yr in present surface-mass-balance calculations.

Drosophila Regulate Yeast Density and Increase Yeast Community Similarity in a Natural Substrate

PubMed Central

Stamps, Judy A.; Yang, Louie H.; Morales, Vanessa M.; Boundy-Mills, Kyria L.

2012-01-01

Drosophila melanogaster adults and larvae, but especially larvae, had profound effects on the densities and community structure of yeasts that developed in banana fruits. Pieces of fruit exposed to adult female flies previously fed fly-conditioned bananas developed higher yeast densities than pieces of the same fruits that were not exposed to flies, supporting previous suggestions that adult Drosophila vector yeasts to new substrates. However, larvae alone had dramatic effects on yeast density and species composition. When yeast densities were compared in pieces of the same fruits assigned to different treatments, fruits that developed low yeast densities in the absence of flies developed significantly higher yeast densities when exposed to larvae. Across all of the fruits, larvae regulated yeast densities within narrow limits, as compared to a much wider range of yeast densities that developed in pieces of the same fruits not exposed to flies. Larvae also affected yeast species composition, dramatically reducing species diversity across fruits, reducing variation in yeast communities from one fruit to the next (beta diversity), and encouraging the consistent development of a yeast community composed of three species of yeast (Candida californica, C. zemplinina, and Pichia kluvyeri), all of which were palatable to larvae. Larvae excreted viable cells of these three yeast species in their fecal pools, and discouraged the growth of filamentous fungi, processes which may have contributed to their effects on the yeast communities in banana fruits. These and other findings suggest that D. melanogaster adults and their larval offspring together engage in ‘niche construction’, facilitating a predictable microbial environment in the fruit substrates in which the larvae live and develop. PMID:22860093

Crust and Upper Mantle Structure of Antarctica from Rayleigh Wave Tomography

NASA Astrophysics Data System (ADS)

Wiens, D. A.; Heeszel, D. S.; Sun, X.; Chaput, J. A.; Aster, R. C.; Nyblade, A.; Anandakrishnan, S.; Wilson, T. J.; Huerta, A. D.

2012-12-01

We combine data from three temporary arrays of seismometers (AGAP/GAMSEIS 2007-2010, ANET/POLENET 2007-2012, TAMSEIS 2001-2003) deployed across Antarctica, along with permanent stations in the region, to produce a large scale shear velocity model of the continent extending from the Gamburtsev Subglacial Mountains (GSM) in East Antarctica, across the Transantarctic Mountains (TAM) and West Antarctic Rift System (WARS) to Marie Byrd Land (MBL) in West Antarctica. Our combined dataset consists of Rayleigh wave phase and amplitude measurements from 112 stations across the study region. We first invert for 2-D Rayleigh wave phase velocities using the two-plane wave method. These results are then inverted for shear velocity structure using crustal thicknesses derived from ambient noise tomography and teleseismic receiver functions. We refine our shear velocity model by performing a Monte Carlo simulation that explores the tradeoff between crustal thickness and upper mantle seismic velocities. The resulting model is higher resolution than previous studies (~150 km resolution length) and highlights significant differences in crustal and uppermost mantle structure between East and West Antarctica in greater detail than previously possible. East Antarctica is underlain by thick crust (reaching ~55 km beneath the GSM) and fast, cratonic lithosphere. West Antarctica is defined by thinner crust and slow upper mantle velocities indicative of its more recent tectonic activity. The observed boundary in crustal thickness closely follows the TAM front. MBL is underlain by a thicker lithosphere than that observed beneath the WARS, but slow mantle velocities persist to depths greater than 200 km, indicating a 'deep seated' (i.e. deeper than the deepest resolvable features of our model) thermal source for volcanism in the region. The slowest seismic velocities at shallow depths are observed in the Terror Rift region of the Ross Sea along an arc following the TAM front, where the most

Landscape evolution of Antarctica

USGS Publications Warehouse

Jamieson, S.S.R.; Sugden, D.E.

2007-01-01

shelf before retreating to its present dimensions at ~13.5 Ma. Subsequent changes in ice extent have been forced mainly by sea-level change. Weathering rates of exposed bedrock have been remarkably slow at high elevations around the margin of East Antarctica under the hyperarid polar climate of the last ~13.5 Ma, offering potential for a long quantitative record of ice-sheet evolution with techniques such as cosmogenic isotope analysis

Origins of native vascular plants of Antarctica: comments from a historical phytogeography viewpoint.

PubMed

Mosyakin, S L; Bezusko, L G; Mosyakin, A S

2007-01-01

The article provides an overview of the problem of origin of the only native vascular plants of Antarctica, Deschampsia antartica (Poaceae) and Colobanthus quitensis (Caryophyllaceae), from the viewpoint of modern historical phytogeography and related fields of science. Some authors suggested the Tertiary relict status of these plants in Antarctica, while others favour their recent Holocene immigration. Direct data (fossil or molecular genetic ones) for solving this controversy is still lacking. However, there is no convincing evidence supporting the Tertiary relict status of these plants in Antarctica. Most probably D. antarctica and C. quitensis migrated to Antarctica in the Holocene or Late Pleistocene (last interglacial?) through bird-aided long-distance dispersal. It should be critically tested by (1) appropriate methods of molecular phylogeography, (2) molecular clock methods, if feasible, (3) direct paleobotanical studies, (4) paleoclimatic reconstructions, and (5) comparison with cases of taxa with similar distribution/dispersal patterns. The problem of the origin of Antarctic vascular plants is a perfect model for integration of modern methods of molecular phylogeography and phylogenetics, population biology, paleobiology and paleogeography for solving a long-standing enigma of historical plant geography and evolution.

NASA Scientific Balloon in Antarctica

NASA Image and Video Library

2017-12-08

NASA image captured December 25, 2011 A NASA scientific balloon awaits launch in McMurdo, Antarctica. The balloon, carrying Indiana University's Cosmic Ray Electron Synchrotron Telescope (CREST), was launched on December 25. After a circum-navigational flight around the South Pole, the payload landed on January 5. The CREST payload is one of two scheduled as part of this seasons' annual NASA Antarctic balloon Campaign which is conducted in cooperation with the National Science Foundation's Office of Polar Programs. The campaign's second payload is the University of Arizona's Stratospheric Terahertz Observatory (STO). You can follow the flights at the Columbia Scientific Balloon Facility's web site at www.csbf.nasa.gov/antarctica/ice.htm Credit: NASA NASA image use policy. NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Like us on Facebook Find us on Instagram

Sleep and circadian rhythms in long duration space flight - Antarctica as an analogue environment

NASA Technical Reports Server (NTRS)

Gander, Philippa H.

1992-01-01

The feasibility of using Antarctica as an environment for studying the impact of unusual 24 h environmental cycles (zeitgebers) on the circadian system is discussed. Adaptation of circadian rhythms and sleep of three scientists travelling from New Zealand to Antarctica during summer (which is analogous to arrival at a lunar base during the lunar day) has been studied. Data obtained indicate that sleep occurred at the same clock time, but sleep quality was poorer in Antarctica, which can be explained by the fact that the circadian system delayed by about 2 h in Antarctica, as would be expected in a weaker zeitgeber environment. It is suggested that sleep could be improved by altering patterns of exposure to the available zeitgebers to increase their effective strength.

Improvement in extracellular protease production by the marine antarctic yeast Rhodotorula mucilaginosa L7.

PubMed

Chaud, Luciana C S; Lario, Luciana D; Bonugli-Santos, Rafaella C; Sette, Lara D; Pessoa Junior, Adalberto; Felipe, Maria das Graças de A

2016-12-25

Microorganisms from extreme and restrictive eco systems, such as the Antarctic continent, are of great interest due to their ability to synthesize products of commercial value. Among these, enzymes from psychrotolerant and psychrophilic microorganisms offer potential economical benefits due to their high activity at low and moderate temperatures. The cold adapted yeast Rhodotorula mucilaginosa L7 was selected out of 97 yeasts isolated from Antarctica as having the highest extracellular proteolytic activity in preliminary tests. The present study was aimed at evaluating the effects of nutrient composition (peptone, rice bran extract, ammonium sulfate, sodium chloride) and physicochemical parameters (temperature and pH) on its proteolytic activity. A 2 6-2 fractional factorial design experiment followed by a central composite design (CCD 2 3 ) was performed to optimize the culture conditions and improve the extracellular proteolytic activity. The results indicated that the presence of peptone in the medium was the most influential factor in protease production. Enzymatic activity was enhanced by the interaction between low glucose and peptone concentrations. The optimization of culture conditions with the aid of mathematical modeling enabled a c. 45% increase in proteolytic activity and at the same time reduced the amount of glucose and peptone required for the culture. Thus culture conditions established in this work may be employed in the biotechnological production of this protease. Copyright © 2016 Elsevier B.V. All rights reserved.

Rubidium-strontium date of possibly 3 billion years for a granitic rock from antarctica.

PubMed

Halpern, M

1970-09-04

A single total rock sample of biotite granite from Jule Peaks, Antarctica, has been dated by the rubidium-strontium method at about 3 billion years. The juxtaposition of this sector of Antarctica with Africa in the Dietz and Sproll continental drift reconstruction results in a possible geochronologic fit of the Princess Martha Coast of Antarctica with a covered possible notheastern extension of the African Swaziland Shield, which contains granitic rocks that are also 3 billion years old.

Remote Triggering of Microseismicity in Antarctica

NASA Astrophysics Data System (ADS)

Ji, M.; Li, C.; Peng, Z.; Walter, J. I.

2017-12-01

It is well known that large distant earthquakes can trigger microearthquakes/tectonic tremors during or immediately following their surface waves. Globally, triggered seismicity is mostly found in active plate boundary regions. Recent studies have shown that icequakes in Antartica can also be triggered by teleseismic events. However, it is still not clear how widespread this phenomenon is and whether there are any connections between large earthquakes and subsequent glacial movements. In this study, we conduct a systematic search for remotely triggered activity in Antarctica following recent large earthquakes, including the 2004 Mw9.1 Sumatra, 2011 Mw9.1 Tohoku, 2012 Mw8.6 Indian Ocean and 2014-2015 Chile earthquakes. We download seismic data recorded at the POLENET (YT) and the Argentina Antarctica Network (AI) from the Incorporated Research Institutions for Seismology (IRIS) Data Management Center (DMC). We apply a 2-8 Hz band-pass-filter to the continuous waveforms and visually identify local events during and immediately after the large amplitude surface waves. Spectrograms are computed as additional tools to identify triggered seismicity and are further confirmed by comparing the signals before and after the distant mainshocks. So far we have identified possible triggered seismicity in both networks' area following the 2010 Chile and 2011 Tohoku earthquakes. Our next step is to apply a waveform matching method to automatically detect possible triggered seismicity and check through all the available networks in Antarctica for the last decades, which should help to better understand the potential interaction between large earthquakes and icequakes in this region.

Prions in Yeast

PubMed Central

Liebman, Susan W.; Chernoff, Yury O.

2012-01-01

The concept of a prion as an infectious self-propagating protein isoform was initially proposed to explain certain mammalian diseases. It is now clear that yeast also has heritable elements transmitted via protein. Indeed, the “protein only” model of prion transmission was first proven using a yeast prion. Typically, known prions are ordered cross-β aggregates (amyloids). Recently, there has been an explosion in the number of recognized prions in yeast. Yeast continues to lead the way in understanding cellular control of prion propagation, prion structure, mechanisms of de novo prion formation, specificity of prion transmission, and the biological roles of prions. This review summarizes what has been learned from yeast prions. PMID:22879407

Read--and Walk--to Antarctica

ERIC Educational Resources Information Center

Harr, Natalie; Doneyko, Kathleen; Lee, Richard E., Jr.

2012-01-01

The students at Crestwood Primary School proved that they have what it takes to exercise their bodies and their minds. In an effort to support their teacher's scientific expedition to Antarctica, students from kindergarten to second grade pledged to read books and do physical activity that equated to the 12,900 km (8,000-mile) journey to the…

Accelerated thermokarst formation in the McMurdo Dry Valleys, Antarctica.

PubMed

Levy, Joseph S; Fountain, Andrew G; Dickson, James L; Head, James W; Okal, Marianne; Marchant, David R; Watters, Jaclyn

2013-01-01

Thermokarst is a land surface lowered and disrupted by melting ground ice. Thermokarst is a major driver of landscape change in the Arctic, but has been considered to be a minor process in Antarctica. Here, we use ground-based and airborne LiDAR coupled with timelapse imaging and meteorological data to show that 1) thermokarst formation has accelerated in Garwood Valley, Antarctica; 2) the rate of thermokarst erosion is presently ~ 10 times the average Holocene rate; and 3) the increased rate of thermokarst formation is driven most strongly by increasing insolation and sediment/albedo feedbacks. This suggests that sediment enhancement of insolation-driven melting may act similarly to expected increases in Antarctic air temperature (presently occurring along the Antarctic Peninsula), and may serve as a leading indicator of imminent landscape change in Antarctica that will generate thermokarst landforms similar to those in Arctic periglacial terrains.

Accelerated thermokarst formation in the McMurdo Dry Valleys, Antarctica

PubMed Central

Levy, Joseph S.; Fountain, Andrew G.; Dickson, James L.; Head, James W.; Okal, Marianne; Marchant, David R.; Watters, Jaclyn

2013-01-01

Thermokarst is a land surface lowered and disrupted by melting ground ice. Thermokarst is a major driver of landscape change in the Arctic, but has been considered to be a minor process in Antarctica. Here, we use ground-based and airborne LiDAR coupled with timelapse imaging and meteorological data to show that 1) thermokarst formation has accelerated in Garwood Valley, Antarctica; 2) the rate of thermokarst erosion is presently ~ 10 times the average Holocene rate; and 3) the increased rate of thermokarst formation is driven most strongly by increasing insolation and sediment/albedo feedbacks. This suggests that sediment enhancement of insolation-driven melting may act similarly to expected increases in Antarctic air temperature (presently occurring along the Antarctic Peninsula), and may serve as a leading indicator of imminent landscape change in Antarctica that will generate thermokarst landforms similar to those in Arctic periglacial terrains. PMID:23881292

Tufted hairgrass (Deschampsia caespitosa) exhibits a lower photosynthetic plasticity than Antarctic hairgrass (D. antarctica).

PubMed

Bystrzejewska-Piotrowska, Grazyna; Urban, Pawel L

2009-06-01

The aim of our work was to assess photosynthetic plasticity of two hairgrass species with different ecological origins (a temperate zone species, Deschampsia caespitosa (L.) Beauv. and an Antarctic species, D. antarctica) and to consider how the anticipated climate change may affect vitality of these plants. Measurements of chlorophyll fluorescence showed that the photosystem II (PSII) quantum efficiency of D. caespitosa decreased during 4 d of incubation at 4 degrees C but it remained stable in D. antarctica. The fluorescence half-rise times were almost always lower in D. caespitosa than in D. antarctica, irrespective of the incubation temperature. These results indicate that the photosynthetic apparatus of D. caespitosa has poorer performance in these conditions. D. caespitosa reached the maximum photosynthesis rate at a higher temperature than D. antarctica although the values obtained at 8 degrees C were similar in both species. The photosynthetic water-use efficiency (photosynthesis-to-transpiration ratio, P/E) emerges as an important factor demonstrating presence of mechanisms which facilitate functioning of a plant in non-optimal conditions. Comparison of the P/E values, which were higher in D. antarctica than in D. caespitosa at low and medium temperatures, confirms a high degree of adjustability of the photosynthetic apparatus in D. antarctica and unveils the lack of such a feature in D. caespitosa.

A Sled-Mounted Vibroseis Seismic Source for Geological Studies in Antarctica

NASA Astrophysics Data System (ADS)

Speece, M. A.; Luyendyk, B. P.; Harwood, D. M.; Powell, R. D.; Wilson, D. S.; Pekar, S. F.; Tulaczyk, S. M.; Rack, F. R.

2013-12-01

Given the success of recent vibrator seismic source (vibroseis) tests in Antarctica, we propose the purchase of a large vibroseis for dedicated use by United States Antarctic Program (USAP) projects in Antarctica. Long seismic reflection profiles across Antarctica can be accomplished efficiently by pulling a sled-mounted vibrator that in turn pulls a snow streamer of gimbaled geophones. A baseplate or pad in the center of the sled will be lowered to the ground and support most of the weight of the vibrator assembly while an actuator vibrates the ground at each source location. The vibroseis will be moved to remote locations using over-ice/snow traverses given the increased reliance on traversing for supplying remote sites in Antarctica. Total vibrator hold-down weight when fully assembled will be ~66,000 lbs. Other design features include a 475 HP Caterpillar C15 diesel engine for the hydraulic power unit. The new vibrator will use an INOVA P-wave vibrator system: new Model PLS-362 actuator with up to 60,000 lbs of peak force and frequency limit of 5 Hz to 250Hz. Antarctic research objectives that could be impacted by the use of a vibrator include: (1) mapping of sub-ice stratigraphic sequences for drilling for paleoclimate information, e.g. the deep sedimentary basins of West Antarctica (Ross and Ronne-Filchner Ice Shelves and related divides); (2) correlating offshore and onshore seismic data and complementing airborne geophysical surveys to help determine Antarctica's geologic history; (3) identifying ice-bedrock interface properties and exploring grounding-line processes for ice dynamics; (4) exploring subglacial lakes and water-routing systems; and, (5) investigating the physical properties of ice sheets. An Antarctic Vibroseis Advisory Committee (AVAC) will promote the use of the vibroseis capability among Antarctic geophysical, geological, glaciological and related scientists and groups by encouraging and facilitating the development and submission of

Mapping Antarctica using Landsat-8 - the preliminary results

NASA Astrophysics Data System (ADS)

Cheng, X.; Hui, F.; Qi, X.

2014-12-01

The first Landsat Image Mosaic of Antarctica (LIMA) was released in 2009, which was created by USGS, BAS, and NASA from more than 1,000 Landsat ETM+ scenes. As the first major scientific outcome of the IPY, LIMA supports current scientific polar research, encourages new projects, and helps the general public visualize Antarctica and changes happening to this southernmost environment. As the latest satellite of Landsat mission, the Landsat-8 images the entire Earth every 16 days in an 8-day offset from Landsat-7. Data collected by the instruments onboard the satellite are available to download at no charge within 24 hours of reception. The standard Landsat 8 products provided by the USGS EROS Center consist of quantized and calibrated scaled Digital Numbers (DN) in 16-bit unsigned integer format and can be rescaled to the Top Of Atmosphere (TOA) reflectance and/or radiance. With the support of USGS portal, we searched and downloaded more than 1600 scenes of Level 1 T- Terrain Corrected Landsat 8 image products covering Antarctica from late 2013 to early 2014. These data were converted to planetary radiance for further processing. Since the distribution of clouds in these images are random and much complicated, statistics on the distribution of clouds were performed and then help to decide masking those thicker cloud to keep more useful information left and avoid observation holes. A preliminary result of the Landsat-8 mosaic of Antarctica under the joint efforts of Beijing Normal University, NSIDC and University of Maryland will be released on this AGU fall meeting. Comparison between Landsat 7 and 8 mosaic products will also be done to find the difference or advantage of the two products.

The Landsat Image Mosaic of Antarctica

USGS Publications Warehouse

Bindschadler, Robert; Vornberger, P.; Fleming, A.; Fox, A.; Mullins, J.; Binnie, D.; Paulsen, S.J.; Granneman, Brian J.; Gorodetzky, D.

2008-01-01

The Landsat Image Mosaic of Antarctica (LIMA) is the first true-color, high-spatial-resolution image of the seventh continent. It is constructed from nearly 1100 individually selected Landsat-7 ETM+ scenes. Each image was orthorectified and adjusted for geometric, sensor and illumination variations to a standardized, almost seamless surface reflectance product. Mosaicing to avoid clouds produced a high quality, nearly cloud-free benchmark data set of Antarctica for the International Polar Year from images collected primarily during 1999-2003. Multiple color composites and enhancements were generated to illustrate additional characteristics of the multispectral data including: the true appearance of the surface; discrimination between snow and bare ice; reflectance variations within bright snow; recovered reflectance values in regions of sensor saturation; and subtle topographic variations associated with ice flow. LIMA is viewable and individual scenes or user defined portions of the mosaic are downloadable at http://lima.usgs.gov. Educational materials associated with LIMA are available at http://lima.nasa.gov.

Draft Genome Sequence of Cryophilic Basidiomycetous Yeast Mrakia blollopis SK-4, Isolated from an Algal Mat of Naga-ike Lake in the Skarvsnes Ice-Free Area, East Antarctica.

PubMed

Tsuji, Masaharu; Kudoh, Sakae; Hoshino, Tamotsu

2015-01-22

Mrakia blollopis strain SK-4 was isolated from an algal mat of Naga-ike, a lake in Skarvsnes, East Antarctica. Here, we report the draft genome sequence of M. blollopis SK-4. This is the first report on the genome sequence of any cold-adapted fungal species. Copyright © 2015 Tsuji et al.

Yeast for virus research

PubMed Central

Zhao, Richard Yuqi

2017-01-01

Budding yeast (Saccharomyces cerevisiae) and fission yeast (Schizosaccharomyces pombe) are two popular model organisms for virus research. They are natural hosts for viruses as they carry their own indigenous viruses. Both yeasts have been used for studies of plant, animal and human viruses. Many positive sense (+) RNA viruses and some DNA viruses replicate with various levels in yeasts, thus allowing study of those viral activities during viral life cycle. Yeasts are single cell eukaryotic organisms. Hence, many of the fundamental cellular functions such as cell cycle regulation or programed cell death are highly conserved from yeasts to higher eukaryotes. Therefore, they are particularly suited to study the impact of those viral activities on related cellular activities during virus-host interactions. Yeasts present many unique advantages in virus research over high eukaryotes. Yeast cells are easy to maintain in the laboratory with relative short doubling time. They are non-biohazardous, genetically amendable with small genomes that permit genome-wide analysis of virologic and cellular functions. In this review, similarities and differences of these two yeasts are described. Studies of virologic activities such as viral translation, viral replication and genome-wide study of virus-cell interactions in yeasts are highlighted. Impacts of viral proteins on basic cellular functions such as cell cycle regulation and programed cell death are discussed. Potential applications of using yeasts as hosts to carry out functional analysis of small viral genome and to develop high throughput drug screening platform for the discovery of antiviral drugs are presented. PMID:29082230

Ice recrystallization inhibition proteins (IRIPs) and freeze tolerance in the cryophilic Antarctic hair grass Deschampsia antarctica E. Desv.

PubMed

John, Ulrik P; Polotnianka, Renatam M; Sivakumaran, Kailayapillai A; Chew, Orinda; Mackin, Leanne; Kuiper, Micheal J; Talbot, Jonathan P; Nugent, Gregory D; Mautord, Julie; Schrauf, Gustavo E; Spangenberg, German C

2009-04-01

Antarctic hair grass (Deschampsia antarctica E. Desv.), the only grass indigenous to Antarctica, has well-developed freezing tolerance, strongly induced by cold acclimation. Here, we show that in response to low temperatures, D. antarctica expresses potent recrystallization inhibition (RI) activity that, inhibits the growth of small ice crystals into potentially damaging large ones, is proteinaceous and localized to the apoplasm. A gene family from D. antarctica encoding putative homologs of an ice recrystallization inhibition protein (IRIP) has been isolated and characterized. IRIPs are apoplastically targeted proteins with two potential ice-binding motifs: 1-9 leucine-rich repeats (LRRs) and c. 16 'IRIP' repeats. IRIP genes appear to be confined to the grass subfamily Pooideae and their products, exhibit sequence similarity to phytosulphokine receptors and are predicted to adopt conformations with two ice-binding surfaces. D. antarctica IRIP (DaIRIP) transcript levels are greatly enhanced in leaf tissue following cold acclimation. Transgenic Arabidopsis thaliana expressing a DaIRIP has novel RI activity, and purified DaIRIP, when added back to extracts of leaves from non-acclimated D. antarctica, can reconstitute the activity found in acclimated plants. We propose that IRIP-mediated RI activity may contribute to the cryotolerance of D. antarctica, and thus to its unique ability to have colonized Antarctica.

Fit between Africa and Antarctica: A Continental Drift Reconstruction.

PubMed

Dietz, R S; Sproll, W P

1970-03-20

A computerized (smallest average misfit) best fit position is obtained for the juxtaposition of Africa and Antarctica in a continental drift reconstruction. An S-shaped portion of the Weddell and Princess Martha Coast regions of western East Antarctica is fitted into a similar profile along southeastern Africa. The total amount of overlap is 36,300 square kilometers, and the underlap is 23,600 square kilometers; the total mismatch is thus of 59,900 square kilometers. The congruency along the 1000-fathom isobath is remarkably good and suggests that this reconstruction is valid within the overall framework of the Gondwana supercontinent.

L-arabinose fermenting yeast

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, Min; Singh, Arjun; Suominen, Pirkko

An L-arabinose utilizing yeast strain is provided for the production of ethanol by introducing and expressing bacterial araA, araB and araD genes. L-arabinose transporters are also introduced into the yeast to enhance the uptake of arabinose. The yeast carries additional genomic mutations enabling it to consume L-arabinose, even as the only carbon source, and to produce ethanol. A yeast strain engineered to metabolize arabinose through a novel pathway is also disclosed. Methods of producing ethanol include utilizing these modified yeast strains.

L-arabinose fermenting yeast

DOEpatents

Zhang, Min; Singh, Arjun; Suominen, Pirkko; Knoshaug, Eric; Franden, Mary Ann; Jarvis, Eric

2014-09-23

An L-arabinose utilizing yeast strain is provided for the production of ethanol by introducing and expressing bacterial araA, araB and araD genes. L-arabinose transporters are also introduced into the yeast to enhance the uptake of arabinose. The yeast carries additional genomic mutations enabling it to consume L-arabinose, even as the only carbon source, and to produce ethanol. A yeast strain engineered to metabolize arabinose through a novel pathway is also disclosed. Methods of producing ethanol include utilizing these modified yeast strains.

Prevention of Yeast Spoilage in Feed and Food by the Yeast Mycocin HMK

PubMed Central

Lowes, K. F.; Shearman, C. A.; Payne, J.; MacKenzie, D.; Archer, D. B.; Merry, R. J.; Gasson, M. J.

2000-01-01

The yeast Williopsis mrakii produces a mycocin or yeast killer toxin designated HMK; this toxin exhibits high thermal stability, high pH stability, and a broad spectrum of activity against other yeasts. We describe construction of a synthetic gene for mycocin HMK and heterologous expression of this toxin in Aspergillus niger. Mycocin HMK was fused to a glucoamylase protein carrier, which resulted in secretion of biologically active mycocin into the culture media. A partial purification protocol was developed, and a comparison with native W. mrakii mycocin showed that the heterologously expressed mycocin had similar physiological properties and an almost identical spectrum of biological activity against a number of yeasts isolated from silage and yoghurt. Two food and feed production systems prone to yeast spoilage were used as models to assess the ability of mycocin HMK to act as a biocontrol agent. The onset of aerobic spoilage in mature maize silage was delayed by application of A. niger mycocin HMK on opening because the toxin inhibited growth of the indigenous spoilage yeasts. This helped maintain both higher lactic acid levels and a lower pH. In yoghurt spiked with dairy spoilage yeasts, A. niger mycocin HMK was active at all of the storage temperatures tested at which yeast growth occurred, and there was no resurgence of resistant yeasts. The higher the yeast growth rate, the more effective the killing action of the mycocin. Thus, mycocin HMK has potential applications in controlling both silage spoilage and yoghurt spoilage caused by yeasts. PMID:10698773

The crustal thickness of West Antarctica

NASA Astrophysics Data System (ADS)

Chaput, J.; Aster, R. C.; Huerta, A.; Sun, X.; Lloyd, A.; Wiens, D.; Nyblade, A.; Anandakrishnan, S.; Winberry, J. P.; Wilson, T.

2014-01-01

P-to-S receiver functions (PRFs) from the Polar Earth Observing Network (POLENET) GPS and seismic leg of POLENET spanning West Antarctica and the Transantarctic Mountains deployment of seismographic stations provide new estimates of crustal thickness across West Antarctica, including the West Antarctic Rift System (WARS), Marie Byrd Land (MBL) dome, and the Transantarctic Mountains (TAM) margin. We show that complications arising from ice sheet multiples can be effectively managed and further information concerning low-velocity subglacial sediment thickness may be determined, via top-down utilization of synthetic receiver function models. We combine shallow structure constraints with the response of deeper layers using a regularized Markov chain Monte Carlo methodology to constrain bulk crustal properties. Crustal thickness estimates range from 17.0±4 km at Fishtail Point in the western WARS to 45±5 km at Lonewolf Nunataks in the TAM. Symmetric regions of crustal thinning observed in a transect deployment across the West Antarctic Ice Sheet correlate with deep subice basins, consistent with pure shear crustal necking under past localized extension. Subglacial sediment deposit thicknesses generally correlate with trough/dome expectations, with the thickest inferred subice low-velocity sediment estimated as ˜0.4 km within the Bentley Subglacial Trench. Inverted PRFs from this study and other published crustal estimates are combined with ambient noise surface wave constraints to generate a crustal thickness map for West Antarctica south of 75°S. Observations are consistent with isostatic crustal compensation across the central WARS but indicate significant mantle compensation across the TAM, Ellsworth Block, MBL dome, and eastern and western sectors of thinnest WARS crust, consistent with low density and likely dynamic, low-viscosity high-temperature mantle.

Avian cholera in Southern Great Petrel (Macronectes giganteus) from Antarctica

USGS Publications Warehouse

Leotta, G.A.; Rivas, M.; Chinen, I.; Vigo, G.B.; Moredo, F.A.; Coria, N.; Wolcott, M.J.

2003-01-01

A southern giant petrel (Macronectes giganteus) was found dead at Potter Peninsula, King George Island, South Shetland, Antarctica. The adult male was discovered approximately 48 hr after death. Macroscopic and microscopic lesions were compatible with avian cholera and the bacterium Pasteurella multocida subsp. gallicida, serotype A1 was isolated from lung, heart, liver, pericardial sac, and air sacs. In addition, Escherichia coli was isolated from pericardial sac and air sacs. This is the first known report of avian cholera in a southern giant petrel in Antarctica.

Secular variation and fluctuation of GPS Total Electron Content over Antarctica

NASA Astrophysics Data System (ADS)

Jin, Rui; Jin, Shuanggen

2013-01-01

The total electron content (TEC) is an important parameters in the Earth's ionosphere, related to various space weather and solar activities. However, understanding of the complex ionospheric environments is still a challenge due to the lack of direct observations, particularly in the polar areas, e.g., Antarctica. Now the Global Positioning System (GPS) can be used to retrieve total electron content (TEC) from dual-frequency observations. The continuous GPS observations in Antarctica provide a good opportunity to investigate ionospheric climatology. In this paper, the long-term variations and fluctuations of TEC over Antarctica are investigated from CODE global ionospheric maps (GIM) with a resolution of 2.5°×5° every two hours since 1998. The analysis shows significant seasonal and secular variations in the GPS TEC. Furthermore, the effects of TEC fluctuations are discussed.

Calving of Talyor Glacier, Dry Valleys, Antarctica

NASA Astrophysics Data System (ADS)

Carmichael, J. D.; Pettit, E. C.; Creager, K. C.; Hallet, B.

2007-12-01

Calving of tide-water glaciers has received considerable attention, with seismic arrays in Alaska, Greenland, and Antarctica devoted to their observation. In these environments, ice cliffs are directly coupled to oceanic temperatures. The land-based polar glaciers of the McMurdo Dry Valleys in Antarctica represent a simpler environment unaffected directly by water contact where other factors can be isolated. In particular, summer calving events of Taylor Glacier are observed to consist of precursory activity including crack growth, cliff overhang, and active seismicity at least 1 hour before collapse. We propose that collapse occurs only after a stress threshold has been crossed, evident from 'pre-calving' of ice from the cliff base 1-3 days prior to the major event. We provide photographic, seismic, and temperature data to illustrate the thermal and stress landscape for land-based calving of polar glaciers.

The contents and distributions of cadmium, mercury, and lead in Usnea antarctica lichens from Solorina Valley, James Ross Island (Antarctica).

PubMed

Zvěřina, Ondřej; Coufalík, Pavel; Barták, Miloš; Petrov, Michal; Komárek, Josef

2017-12-11

Lichens are efficient and cost-effective biomonitors of the environment. Their geographic distribution together with their slow growth rate enable investigation of the deposition patterns of various elements and substances. In this research, levels of cadmium, lead, and mercury in Usnea antarctica lichens in the area of James Ross Island, Antarctica, were investigated. The lichens were microwave-digested, and the metals were determined by means of atomic absorption spectrometry with graphite furnace and a direct mercury analyzer. Median total contents of Cd, Hg, and Pb were 0.04, 0.47, and 1.6 mg/kg in whole lichens, respectively. The bottom-up distributions of these metals in the fruticose lichen thalli were investigated, and it was revealed that the accumulation patterns for mercury and lead were opposite to that for cadmium. The probable reason for this phenomenon may lie in the inner structure of thalli. The total contents of metals were comparable with those published for other unpolluted areas of maritime Antarctica. However, this finding was not expected for mercury, since the sampling locality was close to an area with some of the highest mercury contents published for Antarctic lichens. In short, lichens proved their usability as biological monitors, even in harsh conditions. However, the findings emphasize the need to take into account the distributions of elements both in the environment and in the lichen itself.

Antibacterial, antifungal and antiprotozoal activities of fungal communities present in different substrates from Antarctica

USDA-ARS?s Scientific Manuscript database

Antarctica is a pristine and extreme environment that represents a unique opportunity for taxonomic, ecological and biotechnological studies of the microorganisms. In the present work, the fungal communities of rhizosphere soil of Deschampsia antarctica, soil, ornithogenic soil, marine and lake sedi...

Lithospheric Structure of Antarctica and Implications for Geological and Cryospheric Evolution

NASA Astrophysics Data System (ADS)

Wiens, Douglas; Heeszel, David; Sun, Xinlei; Lloyd, Andrew; Nyblade, Andrew; Anandakrishnan, Sridhar; Aster, Richard; Chaput, Julien; Huerta, Audrey; Hansen, Samantha; Wilson, Terry

2013-04-01

Recent broadband seismic deployments, including the AGAP/GAMSEIS array of 24 broadband seismographs over the Gamburtsev Subglacial Mountains (GSM) in East Antarctica and the POLENET/ANET deployment of 33 seismographs across much of West Antarctica, reveal the detailed crust and upper mantle structure of Antarctica for the first time. The seismographs operate year-around even in the coldest parts of Antarctica, due to novel insulated boxes, power systems, and modified instrumentation developed in collaboration with the IRIS PASSCAL Instrument Center. We analyze the data using several different techniques to develop high-resolution models of Antarctic seismic structure. We use Rayleigh wave phase velocities at periods of 20-180 s determined using a modified two-plane wave decomposition of teleseismic Rayleigh waves to invert for the three dimensional shear velocity structure. In addition, Rayleigh wave group and phase velocities obtained by ambient seismic noise correlation methods provide constraints at shorter periods and shallower depths. Receiver functions provide precise estimates of crustal structure beneath the stations, and P and S wave tomography provides models of upper mantle structure down to ~ 500 km depth along transects of greater seismic station density. The new seismic results show that the high elevations of the GSM are supported by thick crust (~ 55 km), and are underlain by thick Precambrian continental lithosphere that initially formed during Archean to mid-Proterozoic times. The absence of lithospheric thermal anomalies suggests that the mountains were formed by a compressional orogeny during the Paleozoic, thus providing a locus for ice sheet nucleation throughout a long period of geological time. Within West Antarctica, the crust and lithosphere are extremely thin near the Transantarctic Mountain Front and topographic lows such as the Bentley Trench and Byrd Basin, which represent currently inactive Cenozoic rift systems. Slow seismic

Genome reconstructions indicate the partitioning of ecological functions inside a phytoplankton bloom in the Amundsen Sea, Antarctica

PubMed Central

Delmont, Tom O.; Eren, A. Murat; Vineis, Joseph H.; Post, Anton F.

2015-01-01

Antarctica polynyas support intense phytoplankton blooms, impacting their environment by a substantial depletion of inorganic carbon and nutrients. These blooms are dominated by the colony-forming haptophyte Phaeocystis antarctica and they are accompanied by a distinct bacterial population. Yet, the ecological role these bacteria may play in P. antarctica blooms awaits elucidation of their functional gene pool and of the geochemical activities they support. Here, we report on a metagenome (~160 million reads) analysis of the microbial community associated with a P. antarctica bloom event in the Amundsen Sea polynya (West Antarctica). Genomes of the most abundant Bacteroidetes and Proteobacteria populations have been reconstructed and a network analysis indicates a strong functional partitioning of these bacterial taxa. Three of them (SAR92, and members of the Oceanospirillaceae and Cryomorphaceae) are found in close association with P. antarctica colonies. Distinct features of their carbohydrate, nitrogen, sulfur and iron metabolisms may serve to support mutualistic relationships with P. antarctica. The SAR92 genome indicates a specialization in the degradation of fatty acids and dimethylsulfoniopropionate (compounds released by P. antarctica) into dimethyl sulfide, an aerosol precursor. The Oceanospirillaceae genome carries genes that may enhance algal physiology (cobalamin synthesis). Finally, the Cryomorphaceae genome is enriched in genes that function in cell or colony invasion. A novel pico-eukaryote, Micromonas related genome (19.6 Mb, ~94% completion) was also recovered. It contains the gene for an anti-freeze protein, which is lacking in Micromonas at lower latitudes. These draft genomes are representative for abundant microbial taxa across the Southern Ocean surface. PMID:26579075

Effect of wine yeast monoculture practice on the biodiversity of non-Saccharomyces yeasts.

PubMed

Ganga, M A; Martínez, C

2004-01-01

The objective of this work was to study the effect of the use of Saccharomyces cerevisiae monocultures over the biodiversity of non-Saccharomyces yeasts in wine-producing areas in Chile. Microvinifications were carried out with grape musts of two areas. In one of them, the fermentation is carried out mainly in a spontaneous manner, whereas in the other the musts are inoculated with commercial yeasts. The isolated yeasts were identified by the internal transcribed (ITS)/restriction fragment length polymorphism technique. In the industrial production area less variability of yeast genera was observed as compared with the traditional area, an observation that is greatest at the end of the fermentation. Furthermore, a study of the production of extracellular enzymes was done. The majority of the yeasts showed at least one of the activities assayed with the exception of beta-glycosidase. The results suggest that in the industrialized area the diversity of yeasts is less in the traditional area. Likewise, the potentiality of the non-Saccharomyces yeasts as enzyme producers with industrial interest has been confirmed. This study shows the negative effect of the use of monocultures over the biodiversity of yeasts in wine-producing regions.

Topographic Steering of Enhanced Ice Flow at the Bottleneck Between East and West Antarctica

NASA Astrophysics Data System (ADS)

Winter, Kate; Ross, Neil; Ferraccioli, Fausto; Jordan, Tom A.; Corr, Hugh F. J.; Forsberg, René; Matsuoka, Kenichi; Olesen, Arne V.; Casal, Tania G.

2018-05-01

Hypothesized drawdown of the East Antarctic Ice Sheet through the "bottleneck" zone between East and West Antarctica would have significant impacts for a large proportion of the Antarctic Ice Sheet. Earth observation satellite orbits and a sparseness of radio echo sounding data have restricted investigations of basal boundary controls on ice flow in this region until now. New airborne radio echo sounding surveys reveal complex topography of high relief beneath the southernmost Weddell/Ross ice divide, with three subglacial troughs connecting interior Antarctica to the Foundation and Patuxent Ice Streams and Siple Coast ice streams. These troughs route enhanced ice flow through the interior of Antarctica but limit potential drawdown of the East Antarctic Ice Sheet through the bottleneck zone. In a thinning or retreating scenario, these topographically controlled corridors of enhanced flow could however drive ice divide migration and increase mass discharge from interior West Antarctica to the Southern Ocean.

CyberHunt: Head Off to Antarctica.

ERIC Educational Resources Information Center

Kloza, Brad

2001-01-01

Explains how to take an elementary class on a cyber visit to the continent of Antarctica, the highest, driest, and coldest continent on earth. A student reproducible page presents eight web sites to visit in this quest as well as questions to answer about each site. Answers to the questions are included. (SM)

Balloons on Ice: Launch # 2 takes flight in Antarctica

NASA Image and Video Library

2017-12-08

The second of three missions as part of NASA’s Antarctica Long Duration Balloon Flight Campaign was successfully launched at 8:10 a.m. EDT, Dec. 2. The Antarctic Impulsive Transient Antenna (ANITA) from the University of Hawaii at Manoa was launched from Antarctica’s Ross Ice Shelf near McMurdo Station with support from the National Science Foundation’s United States Antarctic Program. Scientists will use ANITA’s instruments to study the reactions in the core of stars and as they explode via the release of neutrinos that travel to Earth and interact with the Antarctica ice. More: go.nasa.gov/2ghR6Le

Low-frequency radar sounder over Glaciers in Alaska, Greenland and Antarctica

NASA Astrophysics Data System (ADS)

Mouginot, J.; Rignot, E. J.; Gim, Y.; Kirchner, D. L.; Merritt, S.; Robison, W. T.

2009-12-01

Ice-thickness and basal layer topography measurements are needed to calculate fluxes through fast-flowing outlet glaciers in Greenland, Alaska, Patagonia and Antarctica. However, relatively high attenuation of radio waves by dielectric absorption and volume scattering from englacial water restrains detection of the bed through warm deep ice. Using a low-frequency (1-5 MHz) airborne radar, we have sounded outlet fast glaciers over Greenland (Store, Upernavik, Hellheim, …), East Antarctica (David, Mertz, Dibble, Byrd, …) and Alaska (Bering, Maslapina, Bagley, …). We will show that we detected the bed through temperate ice up to 1000m thick over Bering and Maslapina Glaciers and also point out difficulty in detecting bed of other Alaska glaciers due to off-nadir returns. We will also make direct comparison of this radar and previous airborne measurements in Greenland and Antarctica in order to discuss a potential improvement of bedrock detectability in temperate ice.

Tasmania in Nuna: Witness to a ~1.4 Ga East Antarctica-Laurentia Connection

NASA Astrophysics Data System (ADS)

Halpin, J. A.; Mulder, J. A.; Daczko, N. R.

2015-12-01

Most recent reconstructions of the supercontinent Nuna juxtapose the North Australian craton, Mawson continent (South Australia-East Antarctica), and Laurentia between 1.6 Ga and 1.3 Ga, but differ in their relative positioning. Tasmania (SE Australia) has not been considered in previous Nuna reconstructions. Prior to late Neoproterozoic rifting, this crustal fragment was likely part of the eastern margin of East Antarctica. The significance of Tasmania's position within Nuna has recently been highlighted with the discovery that the majority of a >10-km-thick marine shelfal package exposed in northwest Tasmania (Rocky Cape Group) was deposited between 1.45 and 1.30 Ga. The detrital zircon signatures of these strata are distinct from other Mesoproterozoic basins in Australia, and instead closely resemble time-equivalent upper parts of the Belt-Purcell Basin of Laurentia, suggesting correlations within Nuna. We investigate the provenance of the Rocky Cape Group quartzites by comparing new detrital zircon U-Pb-Hf isotopic data to an extensive compilation of zircon data from Australia, East Antarctica, and Laurentia. Our analysis demonstrates that the Rocky Cape Group is unlikely to have been sourced from any geological terrane exposed in present-day Australia. Instead, zircon isotopic signatures from basement terranes in Laurentia and East Antarctica show striking similarities to the Rocky Cape Group detrital signature. Paleocurrent data indicate a northwest-southeast-trending paleoshoreline
and suggest that the majority of sediment was sourced from Paleoproterozoic crust in SW Laurentia, which was to the southeast (present-day coordinates) of Tasmania. These new data support a SWEAT-like (southwest United States-East Antarctica) configuration for Nuna. We suggest that rifting propagated southward from ca. 1.4 Ga, leaving a thinned continental connection between East Antarctica and southwest Laurentia onto which the lower-middle RCG was deposited prior to 1.3 Ga.

Antarctica: What Shall We Do with It?

ERIC Educational Resources Information Center

Branson, Margaret S.; Long, Cathryn J.

1977-01-01

Describes a role playing exercise in which students act as delegates to a meeting at which they will revise the Antarctic Treaty. Background information is presented about Antarctica, the Antarctic Treaty, and positions of 19 nations with regard to the Treaty. (Author/DB)

Yeast cell differentiation: Lessons from pathogenic and non-pathogenic yeasts.

PubMed

Palková, Zdena; Váchová, Libuše

2016-09-01

Yeasts, historically considered to be single-cell organisms, are able to activate different differentiation processes. Individual yeast cells can change their life-styles by processes of phenotypic switching such as the switch from yeast-shaped cells to filamentous cells (pseudohyphae or true hyphae) and the transition among opaque, white and gray cell-types. Yeasts can also create organized multicellular structures such as colonies and biofilms, and the latter are often observed as contaminants on surfaces in industry and medical care and are formed during infections of the human body. Multicellular structures are formed mostly of stationary-phase or slow-growing cells that diversify into specific cell subpopulations that have unique metabolic properties and can fulfill specific tasks. In addition to the development of multiple protective mechanisms, processes of metabolic reprogramming that reflect a changed environment help differentiated individual cells and/or community cell constituents to survive harmful environmental attacks and/or to escape the host immune system. This review aims to provide an overview of differentiation processes so far identified in individual yeast cells as well as in multicellular communities of yeast pathogens of the Candida and Cryptococcus spp. and the Candida albicans close relative, Saccharomyces cerevisiae. Molecular mechanisms and extracellular signals potentially involved in differentiation processes are also briefly mentioned. Copyright © 2016 Elsevier Ltd. All rights reserved.

L-arabinose fermenting yeast

DOEpatents

Zhang, Min; Singh, Arjun; Knoshaug, Eric; Franden, Mary Ann; Jarvis, Eric; Suominen, Pirkko

2010-12-07

An L-arabinose utilizing yeast strain is provided for the production of ethanol by introducing and expressing bacterial araA, araB and araD genes. L-arabinose transporters are also introduced into the yeast to enhance the uptake of arabinose. The yeast carries additional genomic mutations enabling it to consume L-arabinose, even as the only carbon source, and to produce ethanol. Methods of producing ethanol include utilizing these modified yeast strains. ##STR00001##

Antarctica - Lessons for a Mars exploration program

NASA Technical Reports Server (NTRS)

Mckay, C. P.

1985-01-01

The history of exploration and the international system of control of Antarctica has often been cited as a paradigm for the exploration of space. The small isolated research stations have been used to model the psychological stresses of future space missions. In addition, the programmatic structure of the U.S. Antarctic Research Program provides several possible analogs to future Mars Programs presently under discussion. These are: (1) Continued presence; (2) Civilian, military and private sector involvement; (3) Scientific activities; (4) Risk assessment and logistical support; (5) Accessibility for non-specialists; (6) Political and strategic motivations; (7) International cooperation/competition. Survival in Antarctica is contingent on advanced technology and the active transport of supplies. The scientific exploration of this remote and barren expanse without, of course, the aid and guidance of indigenous people certainly provides one of the closest analogs available to future science activities on the Martian surface.

Widespread surface meltwater drainage in Antarctica

NASA Astrophysics Data System (ADS)

Kingslake, J.; Ely, J.; Das, I.; Bell, R. E.

2016-12-01

Surface meltwater is thought to cause ice-shelf disintegration, which accelerates the contribution of ice sheets to sea-level rise. Antarctic surface melting is predicted to increase and trigger further ice-shelf disintegration during this century. These climate-change impacts could be modulated by an active hydrological network analogous to the one in operation in Greenland. Despite some observations of Antarctic surface and sub-surface hydrological systems, large-scale active surface drainage in Antarctica has rarely been studied. We use satellite imagery and aerial photography to reveal widespread active hydrology on the surface of the Antarctic Ice Sheet as far south as 85o and as high as 1800 m a.s.l., often near mountain peaks that protrude through the ice (nunataks) and relatively low-albedo `blue-ice areas'. Despite predominantly sub-zero regional air temperatures, as simulated by a regional climate model, Antarctic active drainage has persisted for decades, transporting water through surface streams and feeding vast melt ponds up to 80 km long. Drainage networks (the largest are over 100 km in length) form on flat ice shelves, steep outlet glaciers and ice-sheet flanks across the West and East Antarctica Ice Sheets. Motivated by the proximity of many drainage systems to low-albedo rock and blue-ice areas, we hypothesize a positive feedback between exposed-rock extent, BIA formation, melting and ice-sheet thinning. This feedback relies on drainage moving water long distances from areas near exposed rock, across the grounding line onto and across ice shelves - a process we observe, but had previously thought to be unlikely in Antarctica. This work highlights previously-overlooked processes, not captured by current regional-scale models, which may accelerate the retreat of the Antarctic Ice Sheet.

Nitrile Metabolizing Yeasts

NASA Astrophysics Data System (ADS)

Bhalla, Tek Chand; Sharma, Monica; Sharma, Nitya Nand

Nitriles and amides are widely distributed in the biotic and abiotic components of our ecosystem. Nitrile form an important group of organic compounds which find their applications in the synthesis of a large number of compounds used as/in pharmaceutical, cosmetics, plastics, dyes, etc>. Nitriles are mainly hydro-lyzed to corresponding amide/acid in organic chemistry. Industrial and agricultural activities have also lead to release of nitriles and amides into the environment and some of them pose threat to human health. Biocatalysis and biotransformations are increasingly replacing chemical routes of synthesis in organic chemistry as a part of ‘green chemistry’. Nitrile metabolizing organisms or enzymes thus has assumed greater significance in all these years to convert nitriles to amides/ acids. The nitrile metabolizing enzymes are widely present in bacteria, fungi and yeasts. Yeasts metabolize nitriles through nitrilase and/or nitrile hydratase and amidase enzymes. Only few yeasts have been reported to possess aldoxime dehydratase. More than sixty nitrile metabolizing yeast strains have been hither to isolated from cyanide treatment bioreactor, fermented foods and soil. Most of the yeasts contain nitrile hydratase-amidase system for metabolizing nitriles. Transformations of nitriles to amides/acids have been carried out with free and immobilized yeast cells. The nitrilases of Torulopsis candida>and Exophiala oligosperma>R1 are enantioselec-tive and regiospecific respectively. Geotrichum>sp. JR1 grows in the presence of 2M acetonitrile and may have potential for application in bioremediation of nitrile contaminated soil/water. The nitrilase of E. oligosperma>R1 being active at low pH (3-6) has shown promise for the hydroxy acids. Immobilized yeast cells hydrolyze some additional nitriles in comparison to free cells. It is expected that more focus in future will be on purification, characterization, cloning, expression and immobilization of nitrile metabolizing

Crustal thickness of Antarctica estimated using data from gravimetric satellites

NASA Astrophysics Data System (ADS)

Llubes, Muriel; Seoane, Lucia; Bruinsma, Sean; Rémy, Frédérique

2018-04-01

Computing a better crustal thickness model is still a necessary improvement in Antarctica. In this remote continent where almost all the bedrock is covered by the ice sheet, seismic investigations do not reach a sufficient spatial resolution for geological and geophysical purposes. Here, we present a global map of Antarctic crustal thickness computed from space gravity observations. The DIR5 gravity field model, built from GOCE and GRACE gravimetric data, is inverted with the Parker-Oldenburg iterative algorithm. The BEDMAP products are used to estimate the gravity effect of the ice and the rocky surface. Our result is compared to crustal thickness calculated from seismological studies and the CRUST1.0 and AN1 models. Although the CRUST1.0 model shows a very good agreement with ours, its spatial resolution is larger than the one we obtain with gravimetric data. Finally, we compute a model in which the crust-mantle density contrast is adjusted to fit the Moho depth from the CRUST1.0 model. In East Antarctica, the resulting density contrast clearly shows higher values than in West Antarctica.

Genome dynamics and evolution in yeasts: A long-term yeast-bacteria competition experiment

PubMed Central

Katz, Michael; Knecht, Wolfgang; Compagno, Concetta; Piškur, Jure

2018-01-01

There is an enormous genetic diversity evident in modern yeasts, but our understanding of the ecological basis of such diversifications in nature remains at best fragmented so far. Here we report a long-term experiment mimicking a primordial competitive environment, in which yeast and bacteria co-exist and compete against each other. Eighteen yeasts covering a wide phylogenetic background spanning approximately 250 million years of evolutionary history were used to establish independent evolution lines for at most 130 passages. Our collection of hundreds of modified strains generated through such a rare two-species cross-kingdom competition experiment re-created the appearance of large-scale genomic rearrangements and altered phenotypes important in the diversification history of yeasts. At the same time, the methodology employed in this evolutionary study would also be a non-gene-technological method of reprogramming yeast genomes and then selecting yeast strains with desired traits. Cross-kingdom competition may therefore be a method of significant value to generate industrially useful yeast strains with new metabolic traits. PMID:29624585

The Southern Cone and Antarctica. Strategies for the 1990’s.

DTIC Science & Technology

1986-01-01

and issued an executive decree on 6 November 1940 ( Decreto No. 1707). The decree laid out the Chilean claim as the lands and ice packs lying between 530...Atlantic (London: British Broadcasting Corp. Publications, 1985), p. 170 . 13Lovering, p. 195. 14Fred Parkinson, "Latin America and Antarctica: An...34Antarctica: A Case for the UN?" World Today 40 (April 1984): 170 -1. Jorge A. Fraga, Introducci6n a la geopolitica antirtica (Buenos Aires: Direcci6n

Direct gravimetric determination of aerosol mass concentration in central antarctica.

PubMed

Annibaldi, Anna; Truzzi, Cristina; Illuminati, Silvia; Scarponi, Giuseppe

2011-01-01

In Antarctica, experimental difficulties due to extreme conditions have meant that aerosol mass has rarely been measured directly by gravimetry, and only in coastal areas where concentrations were in the range of 1-7 μg m(-3). The present work reports on a careful differential weighing methodology carried out for the first time on the plateau of central Antarctica (Dome C, East Antarctica). To solve problems of accurate aerosol mass measurements, a climatic room was used for conditioning and weighing filters. Measurements were carried out in long stages of several hours of readings with automatic recording of temperature/humidity and mass. This experimental scheme allowed us to sample from all the measurements (up to 2000) carried out before and after exposure, those which were recorded under the most stable humidity conditions and, even more importantly, as close to each other as possible. The automatic reading of the mass allowed us in any case to obtain hundreds of measurements from which to calculate average values with uncertainties sufficiently low to meet the requirements of the differential weighing procedure (±0.2 mg in filter weighing, between ±7% and ±16% both in aerosol mass and concentration measurements). The results show that the average summer aerosol mass concentration (aerodynamic size ≤10 μm) in central Antarctica is about 0.1 μg m(-3), i.e., about 1/10 of that of coastal Antarctic areas. The concentration increases by about 4-5 times at a site very close to the station.

Bryan Coast, English Coast, Alexander Island, Fallieres Coast, and Bellingshausen Sea, Antarctica

NASA Technical Reports Server (NTRS)

2002-01-01

This image of Antarctica shows the Bryan Coast (lower left), the English Coast (lower central), Alexander Island (middle right), the Fallieres Coast (top right), and the Bellingshausen Sea. The entire continent has been dedicated to peaceful scientific investigation since 1961, with the signing of the Antarctic Treaty.The waters surrounding Antarctica are intensely cold. Salt water freezes at -2C, allowing sea ice to form. The middle left portion of the image shows quite a lot of sea ice in the Bellingshausen Sea. During the Antarctic winter, when data for this image was acquired, Antarctica doubles in size to about 28.5 million square km (or about 11 million square miles), and temperatures in the -60C range are common.This true-color image was compiled from MODIS data gathered March 29, 2002. Credit: Jacques Descloitres, MODIS Land Rapid Response Team, NASA/GSFC

Antarctica and Its Ice Sheet: Knowledge Gained During the IGY/IGC

NASA Astrophysics Data System (ADS)

Bentley, C. R.

2006-12-01

At the end of World War II, the interior of Antarctica, with the exception of the mountains south of the Ross Ice Shelf, was still terra incognita. It was described simply as a nearly continuous high plateau. Even less was known about the ice thickness; the eminent glacial geologist, Richard Foster Flint, believed it "unlikely that the ice thickness exceeds 2000 feet except very locally; probably its average thickness is considerably less." Then in the late 1940's and early 1950's, seismic sounding in Greenland by the Expéditions Polaires Françaises and in Queen Maud Land by the Norwegian-British-Swedish Antarctic Expedition, 1949-52, revealed that, inland of the coastal mountains, the beds in both regions lie close to sea level. This led to a reappraisal of the Antarctic ice sheet, such that the prescient glaciologist, Robert P. Sharp, could predict, on the eve of the IGY, that "between 3000 and 4000 meters of ice will be found" in East Antarctica and that "work during IGY will establish an average thickness for Antarctic inland ice in excess of 1600 m." Seismic and gravity soundings on oversnow traverses conducted by eight countries during the IGY and the succeeding IGC showed Sharp to be basically correct, but there were major surprises, such as the vast Gamburtsev Subglacial Mountains, completely hidden by the ice in central East Antarctica, and the equally vast Byrd Subglacial Basin beneath much of the West Antarctic ice sheet, so deep that roughly half the ice in the region lies below sea level. There were major discoveries on and above the surface too, such as the huge size of the Filchner/Ronne Ice Shelf, and the very existence of the Ellsworth and Pensacola Mountains, the former including the highest peak on the continent. Further, the fundamental difference between the crustal structures of East and West Antarctica became clear. A summary paper published in 1960, looking primarily at West Antarctica where the main U.S. activity lay, could conclude that

Ellsworth mountains: Position in West Antarctica due to sea-floor spreading

USGS Publications Warehouse

Schopf, J.M.

1969-01-01

Similarities of middle and upper Paleozoic deposits of the Ellsworth Mountains with those of the Pensacola, Horlick, and other Transantarctic mountains indicate that all these ranges may have had a related geologic history. A tentative explanation is now suggested which involves sea-floor spreading and translocation of the Ellsworth crustal block from its original location adjacent to the East Antarctic Shield. Accordingly, the islands of West Antarctica may differ in origin and the Transantarctic Mountains of East Antarctica may represent one margin of an ancient rift.

Magnetic anomalies in the Cosmonauts Sea, off East Antarctica

NASA Astrophysics Data System (ADS)

Nogi, Y.; Hanyu, T.; Fujii, M.

2017-12-01

Identification of magnetic anomaly lineations and fracture zone trends in the Southern Indian Ocean, are vital to understanding the breakup of Gondwana. However, the magnetic spreading anomalies and fracture zones are not clear in the Southern Indian Ocean. Magnetic anomaly lineations in the Cosmonauts Sea, off East Antarctica, are key to elucidation of separation between Sri Lanka/India and Antarctica. No obvious magnetic anomaly lineations are observed from a Japanese/German aerogeophysical survey in the Cosmonauts Sea, and this area is considered to be created by seafloor spreading during the Cretaceous Normal Superchron. Vector magnetic anomaly measurements have been conducted on board the Icebreaker Shirase mainly to understand the process of Gondwana fragmentation in the Indian Ocean. Magnetic boundary strikes are derived from vector magnetic anomalies obtained in the Cosmonauts Sea. NE-SW trending magnetic boundary strikes are mainly observed along the several NW-SE oriented observation lines with magnetic anomaly amplitudes of about 200 nT. These NE-SW trending magnetic boundary strikes possibly indicate M-series magnetic anomalies that can not be detected from the aerogeophysical survey with nearly N-S observation lines. We will discuss the magnetic spreading anomalies and breakup process between Sri Lanka/India and Antarctica in the Cosmonauts Sea.

Planetary geomorphology field studies: Iceland and Antarctica

NASA Technical Reports Server (NTRS)

Malin, M. C.

1984-01-01

Field studies of terrestrial landforms and the processes that shape them provide new directions to the study of planetary features. These studies, conducted in Iceland and in Antarctica, investigated physical and chemical weathering mechanisms and rates, eolitan processes, mudflow phenomena, drainage development, and catastrophic fluvial and volcanic phenomena. Continuing investigations in Iceland fall in three main catagories: (1) catastrophic floods of the Jokulsa a Fjollum, (2) lahars associated with explosive volcanic eruptions of Askja caldera, and (3) rates of eolian abrasion in cold, volcanic deserts. The ice-free valleys of Antarctica, in particular those in South Victoria Land, have much is common with the surface of Mars. In addition to providing independent support for the application of the Iceland findings to consideration of the martian erosional system, the Antarctic observations also provide analogies to other martian phenomena. For example, a family of sand dunes in Victoria Valley are stabilized by the incorporation of snow as beds.

New yeasts-new brews: modern approaches to brewing yeast design and development.

PubMed

Gibson, B; Geertman, J-M A; Hittinger, C T; Krogerus, K; Libkind, D; Louis, E J; Magalhães, F; Sampaio, J P

2017-06-01

The brewing industry is experiencing a period of change and experimentation largely driven by customer demand for product diversity. This has coincided with a greater appreciation of the role of yeast in determining the character of beer and the widespread availability of powerful tools for yeast research. Genome analysis in particular has helped clarify the processes leading to domestication of brewing yeast and has identified domestication signatures that may be exploited for further yeast development. The functional properties of non-conventional yeast (both Saccharomyces and non-Saccharomyces) are being assessed with a view to creating beers with new flavours as well as producing flavoursome non-alcoholic beers. The discovery of the psychrotolerant S. eubayanus has stimulated research on de novo S. cerevisiae × S. eubayanus hybrids for low-temperature lager brewing and has led to renewed interest in the functional importance of hybrid organisms and the mechanisms that determine hybrid genome function and stability. The greater diversity of yeast that can be applied in brewing, along with an improved understanding of yeasts' evolutionary history and biology, is expected to have a significant and direct impact on the brewing industry, with potential for improved brewing efficiency, product diversity and, above all, customer satisfaction. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Estimating Antarctica land topography from GRACE gravity and ICESat altimetry data

NASA Astrophysics Data System (ADS)

Wu, I.; Chao, B. F.; Chen, Y.

2009-12-01

We propose a new method combining GRACE (Gravity Recovery and Climate Experiment) gravity and ICESat (Ice, Cloud, and land Elevation Satellite) altimetry data to estimate the land topography for Antarctica. Antarctica is the fifth-largest continent in the world and about 98% of Antarctica is covered by ice, where in-situ measurements are difficult. Some experimental airborne radar and ground-based radar data have revealed very limited land topography beneath heavy ice sheet. To estimate the land topography for the full coverage of Antarctica, we combine GRACE data that indicate the mass distribution, with data of ICESat laser altimetry that provide high-resolution mapping of ice topography. Our approach is actually based on some geological constraints: assuming uniform densities of the land and ice considering the Airy-type isostasy. In the beginning we construct an initial model for the ice thickness and land topography based on the BEDMAP ice thickness and ICESat data. Thereafter we forward compute the model’s gravity field and compare with the GRACE observed data. Our initial model undergoes the adjustments to improve the fit between modeled results and the observed data. Final examination is done by comparing our results with previous but sparse observations of ice thickness to reconfirm the reliability of our results. As the gravitational inversion problem is non-unique, our estimating result is just one of all possibilities constrained by available data in optimal way.

Vaginal yeast infection

MedlinePlus

Yeast infection - vagina; Vaginal candidiasis; Monilial vaginitis ... Most women have a vaginal yeast infection at some time. Candida albicans is a common type of fungus. It is often found in small amounts in the ...

Challenges in protecting the wilderness of Antarctica

Treesearch

Tina Tin; Alan Hemmings

2011-01-01

Since 1998, the wilderness values of Antarctica have been among those given legal recognition under the Protocol on Environmental Protection to the Antarctic Treaty. Despite the legal obligation, on-the-ground implementation has attracted little interest. The term "wilderness" and its consequential operational implication, including the designation of...

Schizosaccharomyces japonicus: the fission yeast is a fusion of yeast and hyphae.

PubMed

Niki, Hironori

2014-03-01

The clade of Schizosaccharomyces includes 4 species: S. pombe, S. octosporus, S. cryophilus, and S. japonicus. Although all 4 species exhibit unicellular growth with a binary fission mode of cell division, S. japonicus alone is dimorphic yeast, which can transit from unicellular yeast to long filamentous hyphae. Recently it was found that the hyphal cells response to light and then synchronously activate cytokinesis of hyphae. In addition to hyphal growth, S. japonicas has many properties that aren't shared with other fission yeast. Mitosis of S. japonicas is referred to as semi-open mitosis because dynamics of nuclear membrane is an intermediate mode between open mitosis and closed mitosis. Novel genetic tools and the whole genomic sequencing of S. japonicas now provide us with an opportunity for revealing unique characters of the dimorphic yeast. © 2013 The Author. Yeast Published by John Wiley & Sons Ltd.

An Evaluation of Antarctica as a Calibration Target for Passive Microwave Satellite Missions

NASA Technical Reports Server (NTRS)

Kim, Edward

2012-01-01

Passive microwave remote sensing at L-band (1.4 GHz) is sensitive to soil moisture and sea surface salinity, both important climate variables. Science studies involving these variables can now take advantage of new satellite L-band observations. The first mission with regular global passive microwave observations at L-band is the European Space Agency's Soil Moisture and Ocean Salinity (SMOS), launched November, 2009. A second mission, NASA's Aquarius, was launched June, 201l. A third mission, NASA's Soil Moisture Active Passive (SMAP) is scheduled to launch in 2014. Together, these three missions may provide a decade-long data record -- provided that they are intercalibrated. The intercalibration is best performed at the radiance (brightness temperature) level, and Antarctica is proving to be a key calibration target. However, Antarctica has thus far not been fully characterized as a potential target. This paper will present evaluations of Antarctica as a microwave calibration target for the above satellite missions. Preliminary analyses have identified likely target areas, such as the vicinity of Dome-C and larger areas within East Antarctica. Physical sources of temporal and spatial variability of polar firn are key to assessing calibration uncertainty. These sources include spatial variability of accumulation rate, compaction, surface characteristics (dunes, micro-topography), wind patterns, and vertical profiles of density and temperature. Using primarily SMOS data, variability is being empirically characterized and attempts are being made to attribute observed variability to physical sources. One expected outcome of these studies is the potential discovery of techniques for remotely sensing--over all of Antarctica--parameters such as surface temperature.

Transcriptomic response of the Antarctic pteropod Limacina helicina antarctica to ocean acidification.

PubMed

Johnson, Kevin M; Hofmann, Gretchen E

2017-10-23

Ocean acidification (OA), a change in ocean chemistry due to the absorption of atmospheric CO 2 into surface oceans, challenges biogenic calcification in many marine organisms. Ocean acidification is expected to rapidly progress in polar seas, with regions of the Southern Ocean expected to experience severe OA within decades. Biologically, the consequences of OA challenge calcification processes and impose an energetic cost. In order to better characterize the response of a polar calcifier to conditions of OA, we assessed differential gene expression in the Antarctic pteropod, Limacina helicina antarctica. Experimental levels of pCO 2 were chosen to create both contemporary pH conditions, and to mimic future pH expected in OA scenarios. Significant changes in the transcriptome were observed when juvenile L. h. antarctica were acclimated for 21 days to low-pH (7.71), mid-pH (7.9) or high-pH (8.13) conditions. Differential gene expression analysis of individuals maintained in the low-pH treatment identified down-regulation of genes involved in cytoskeletal structure, lipid transport, and metabolism. High pH exposure led to increased expression and enrichment for genes involved in shell formation, calcium ion binding, and DNA binding. Significant differential gene expression was observed in four major cellular and physiological processes: shell formation, the cellular stress response, metabolism, and neural function. Across these functional groups, exposure to conditions that mimic ocean acidification led to rapid suppression of gene expression. Results of this study demonstrated that the transcriptome of the juvenile pteropod, L. h. antarctica, was dynamic and changed in response to different levels of pCO 2 . In a global change context, exposure of L. h. antarctica to the low pH, high pCO 2 OA conditions resulted in a suppression of transcripts for genes involved in key physiological processes: calcification, metabolism, and the cellular stress response. The

Marine yeast isolation and industrial application.

PubMed

Zaky, Abdelrahman Saleh; Tucker, Gregory A; Daw, Zakaria Yehia; Du, Chenyu

2014-09-01

Over the last century, terrestrial yeasts have been widely used in various industries, such as baking, brewing, wine, bioethanol and pharmaceutical protein production. However, only little attention has been given to marine yeasts. Recent research showed that marine yeasts have several unique and promising features over the terrestrial yeasts, for example higher osmosis tolerance, higher special chemical productivity and production of industrial enzymes. These indicate that marine yeasts have great potential to be applied in various industries. This review gathers the most recent techniques used for marine yeast isolation as well as the latest applications of marine yeast in bioethanol, pharmaceutical and enzyme production fields. © 2014 The Authors FEMS Yeast Research published by John Wiley & Sons Ltd on behalf of Federation of European Microbiological Societies.

Relative sea-level rise around East Antarctica during Oligocene glaciation

NASA Astrophysics Data System (ADS)

Stocchi, Paolo; Escutia, Carlota; Houben, Alexander J. P.; Vermeersen, Bert L. A.; Bijl, Peter K.; Brinkhuis, Henk; Deconto, Robert M.; Galeotti, Simone; Passchier, Sandra; Pollard, David; Brinkhuis, Henk; Escutia, Carlota; Klaus, Adam; Fehr, Annick; Williams, Trevor; Bendle, James A. P.; Bijl, Peter K.; Bohaty, Steven M.; Carr, Stephanie A.; Dunbar, Robert B.; Flores, Jose Abel; Gonzàlez, Jhon J.; Hayden, Travis G.; Iwai, Masao; Jimenez-Espejo, Francisco J.; Katsuki, Kota; Kong, Gee Soo; McKay, Robert M.; Nakai, Mutsumi; Olney, Matthew P.; Passchier, Sandra; Pekar, Stephen F.; Pross, Jörg; Riesselman, Christina; Röhl, Ursula; Sakai, Toyosaburo; Shrivastava, Prakash Kumar; Stickley, Catherine E.; Sugisaki, Saiko; Tauxe, Lisa; Tuo, Shouting; van de Flierdt, Tina; Welsh, Kevin; Yamane, Masako

2013-05-01

During the middle and late Eocene (~ 48-34Myr ago), the Earth's climate cooled and an ice sheet built up on Antarctica. The stepwise expansion of ice on Antarctica induced crustal deformation and gravitational perturbations around the continent. Close to the ice sheet, sea level rose despite an overall reduction in the mass of the ocean caused by the transfer of water to the ice sheet. Here we identify the crustal response to ice-sheet growth by forcing a glacial-hydro isostatic adjustment model with an Antarctic ice-sheet model. We find that the shelf areas around East Antarctica first shoaled as upper mantle material upwelled and a peripheral forebulge developed. The inner shelf subsequently subsided as lithosphere flexure extended outwards from the ice-sheet margins. Consequently the coasts experienced a progressive relative sea-level rise. Our analysis of sediment cores from the vicinity of the Antarctic ice sheet are in agreement with the spatial patterns of relative sea-level change indicated by our simulations. Our results are consistent with the suggestion that near-field processes such as local sea-level change influence the equilibrium state obtained by an ice-sheet grounding line.

Continent-wide risk assessment for the establishment of nonindigenous species in Antarctica

PubMed Central

Chown, Steven L.; Huiskes, Ad H. L.; Gremmen, Niek J. M.; Lee, Jennifer E.; Terauds, Aleks; Crosbie, Kim; Frenot, Yves; Hughes, Kevin A.; Imura, Satoshi; Kiefer, Kate; Lebouvier, Marc; Raymond, Ben; Tsujimoto, Megumu; Ware, Chris; Van de Vijver, Bart; Bergstrom, Dana Michelle

2012-01-01

Invasive alien species are among the primary causes of biodiversity change globally, with the risks thereof broadly understood for most regions of the world. They are similarly thought to be among the most significant conservation threats to Antarctica, especially as climate change proceeds in the region. However, no comprehensive, continent-wide evaluation of the risks to Antarctica posed by such species has been undertaken. Here we do so by sampling, identifying, and mapping the vascular plant propagules carried by all categories of visitors to Antarctica during the International Polar Year's first season (2007–2008) and assessing propagule establishment likelihood based on their identity and origins and on spatial variation in Antarctica's climate. For an evaluation of the situation in 2100, we use modeled climates based on the Intergovernmental Panel on Climate Change's Special Report on Emissions Scenarios Scenario A1B [Nakićenović N, Swart R, eds (2000) Special Report on Emissions Scenarios: A Special Report of Working Group III of the Intergovernmental Panel on Climate Change (Cambridge University Press, Cambridge, UK)]. Visitors carrying seeds average 9.5 seeds per person, although as vectors, scientists carry greater propagule loads than tourists. Annual tourist numbers (∼33,054) are higher than those of scientists (∼7,085), thus tempering these differences in propagule load. Alien species establishment is currently most likely for the Western Antarctic Peninsula. Recent founder populations of several alien species in this area corroborate these findings. With climate change, risks will grow in the Antarctic Peninsula, Ross Sea, and East Antarctic coastal regions. Our evidence-based assessment demonstrates which parts of Antarctica are at growing risk from alien species that may become invasive and provides the means to mitigate this threat now and into the future as the continent's climate changes. PMID:22393003

Yeast ecology of Kombucha fermentation.

PubMed

Teoh, Ai Leng; Heard, Gillian; Cox, Julian

2004-09-01

Kombucha is a traditional fermentation of sweetened tea, involving a symbiosis of yeast species and acetic acid bacteria. Despite reports of different yeast species being associated with the fermentation, little is known of the quantitative ecology of yeasts in Kombucha. Using oxytetracycline-supplemented malt extract agar, yeasts were isolated from four commercially available Kombucha products and identified using conventional biochemical and physiological tests. During the fermentation of each of the four products, yeasts were enumerated from both the cellulosic pellicle and liquor of the Kombucha. The number and diversity of species varied between products, but included Brettanomyces bruxellensis, Candida stellata, Schizosaccharomyces pombe, Torulaspora delbrueckii and Zygosaccharomyces bailii. While these yeast species are known to occur in Kombucha, the enumeration of each species present throughout fermentation of each of the four Kombucha cultures demonstrated for the first time the dynamic nature of the yeast ecology. Kombucha fermentation is, in general, initiated by osmotolerant species, succeeded and ultimately dominated by acid-tolerant species.

From sea to land: assessment of the bio-transport of phosphorus by penguins in Antarctica

NASA Astrophysics Data System (ADS)

Qin, Xianyan; Sun, Liguang; Blais, Jules M.; Wang, Yuhong; Huang, Tao; Huang, Wen; Xie, Zhouqing

2014-01-01

In Antarctica, the marine ecosystem is dynamically interrelated with the terrestrial ecosystem. An example of the link between these two ecosystems is the biogeochemical cycle of phosphorus. Biovectors, such as penguins, transport phosphorus from sea to land, play a key role in this cycle. In this paper, we selected three colonies of penguins, the most important seabirds in Antarctica, and computed the annual quantity of phosphorus transferred from sea to land by these birds. Our results show that adult penguins from colonies at Ardley Island, the Vestfold Hills, and Ross Island could transfer phosphorus in the form of guano at up to 12 349, 167 036, and 97 841 kg/a, respectively, over their breeding period. These quantities are equivalent to an annual input of 3.96×109-1.63×1010 kg of seawater to the land of Antarctica. Finally, we discuss the impact of phosphorus on the ice-free areas of the Antarctica.

U.S. Geological Survey scientific activities in the exploration of Antarctica: 1995-96 field season

USGS Publications Warehouse

Meunier, Tony K.; Williams, Richard S.; Ferrigno, Jane G.

2007-01-01

The U.S. Geological Survey (USGS) mapping program in Antarctica is one of the longest continuously funded projects in the United States Antarctic Program (USAP). This is the 46th U.S. expedition to Antarctica in which USGS scientists have participated. The financial support from the National Science Foundation, which extends back to the time of the International Geophysical Year (IGY) in 1956-57, can be attributed to the need for accurate maps of specific field areas or regions where NSF-funded science projects were planned. The epoch of Antarctic exploration during the IGY was being driven by science and, in a spirit of peaceful cooperation, the international scientific community wanted to limit military activities on the continent to logistical support. The USGS, a Federal civilian science agency in the Department of the Interior, had, since its founding in 1879, carried out numerous field-based national (and some international) programs in biology, geology, hydrology, and mapping. Therefore, the USGS was the obvious choice for these tasks, because it already had a professional staff of experienced mapmakers and program managers with the foresight, dedication, and understanding of the need for accurate maps to support the science programs in Antarctica when asked to do so by the U.S. National Academy of Sciences. Public Laws 85-743 and 87-626, signed in August 1958 and in September 1962, respectively, authorized the Secretary, U.S. Department of the Interior, through the USGS, to support mapping and scientific work in Antarctica. The USGS mapping and science programs still play a significant role in the advancement of science in Antarctica today. Antarctica is the planet's 5th largest continent (13.2 million km2 (5.1 million mi2)), it contains the world's largest (of two) remaining ice sheet, and it is considered to be one of the most important scientific laboratories on Earth. This report provides documentation of USGS scientific activities in the exploration of

U.S. Geological Survey scientific activities in the exploration of Antarctica: 2002-03 field season

USGS Publications Warehouse

Meunier, Tony K.; Williams, Richard S.; Ferrigno, Jane G.

2007-01-01

The U.S. Geological Survey (USGS) mapping program in Antarctica is one of the longest continuously funded projects in the United States Antarctic Program (USAP). This is the 53rd U.S. expedition to Antarctica in which USGS scientists have participated. The financial support from the National Science Foundation, which extends back to the time of the International Geophysical Year (IGY) in 1956–57, can be attributed to the need for accurate maps of specific field areas or regions where NSF-funded science projects were planned. The epoch of Antarctic exploration during the IGY was being driven by science, and, in a spirit of peaceful cooperation, the international scientific community wanted to limit military activities on the continent to logistical support. The USGS, a Federal civilian science agency in the Department of the Interior, had, since its founding in 1879, carried out numerous field-based national (and some international) programs in biology, geology, hydrology, and mapping. Therefore, the USGS was the obvious choice for these tasks, because it already had a professional staff of experienced mapmakers and program managers with the foresight, dedication, and understanding of the need for accurate maps to support the science programs in Antarctica when asked to do so by the U.S. National Academy of Sciences. Public Laws 85-743 and 87-626, signed in August 1958 and in September 1962, respectively, authorized the Secretary, U.S. Department of the Interior, through the USGS, to support mapping and scientific work in Antarctica. The USGS mapping and science programs still play a significant role in the advancement of science in Antarctica today. Antarctica is the planet's 5th largest continent [13.2 million km2 (5.1 million mi2)], it contains the world's largest (of two) remaining ice sheets, and it is considered to be one of the most important scientific laboratories on Earth. This report provides documentation of USGS scientific activities in the

Marine yeast isolation and industrial application

PubMed Central

Zaky, Abdelrahman Saleh; Tucker, Gregory A; Daw, Zakaria Yehia; Du, Chenyu

2014-01-01

Over the last century, terrestrial yeasts have been widely used in various industries, such as baking, brewing, wine, bioethanol and pharmaceutical protein production. However, only little attention has been given to marine yeasts. Recent research showed that marine yeasts have several unique and promising features over the terrestrial yeasts, for example higher osmosis tolerance, higher special chemical productivity and production of industrial enzymes. These indicate that marine yeasts have great potential to be applied in various industries. This review gathers the most recent techniques used for marine yeast isolation as well as the latest applications of marine yeast in bioethanol, pharmaceutical and enzyme production fields. PMID:24738708

Onset of deglacial warming in West Antarctica driven by local orbital forcing.

PubMed

2013-08-22

The cause of warming in the Southern Hemisphere during the most recent deglaciation remains a matter of debate. Hypotheses for a Northern Hemisphere trigger, through oceanic redistributions of heat, are based in part on the abrupt onset of warming seen in East Antarctic ice cores and dated to 18,000 years ago, which is several thousand years after high-latitude Northern Hemisphere summer insolation intensity began increasing from its minimum, approximately 24,000 years ago. An alternative explanation is that local solar insolation changes cause the Southern Hemisphere to warm independently. Here we present results from a new, annually resolved ice-core record from West Antarctica that reconciles these two views. The records show that 18,000 years ago snow accumulation in West Antarctica began increasing, coincident with increasing carbon dioxide concentrations, warming in East Antarctica and cooling in the Northern Hemisphere associated with an abrupt decrease in Atlantic meridional overturning circulation. However, significant warming in West Antarctica began at least 2,000 years earlier. Circum-Antarctic sea-ice decline, driven by increasing local insolation, is the likely cause of this warming. The marine-influenced West Antarctic records suggest a more active role for the Southern Ocean in the onset of deglaciation than is inferred from ice cores in the East Antarctic interior, which are largely isolated from sea-ice changes.

Onset of deglacial warming in West Antarctica driven by local orbital forcing

USGS Publications Warehouse

WAIS Divide Project Members,; Fudge, T. J.; Steig, Eric J.; Markle, Bradley R.; Schoenemann, Spruce W.; Ding, Qinghua; Taylor, Kendrick C.; McConnell, Joseph R.; Brook, Edward J.; Sowers, Todd; White, James W. C.; Alley, Richard B.; Cheng, Hai; Clow, Gary D.; Cole-Dai, Jihong; Conway, Howard; Cuffey, Kurt M.; Edwards, Jon S.; Edwards, R. Lawrence; Edwards, Ross; Fegyveresi, John M.; Ferris, David; Fitzpatrick, Joan J.; Johnson, Jay; Hargreaves, Geoffrey; Lee, James E.; Maselli, Olivia J.; Mason, William; McGwire, Kenneth C.; Mitchell, Logan E.; Mortensen, Nicolai B.; Neff, Peter; Orsi, Anais J.; Popp, Trevor J.; Schauer, Andrew J.; Severinghaus, Jeffrey P.; Sigl, Michael; Spencer, Matthew K.; Vaughn, Bruce H.; Voigt, Donald E.; Waddington, Edwin D.; Wang, Xianfeng; Wong, Gifford J.

2013-01-01

The cause of warming in the Southern Hemisphere during the most recent deglaciation remains a matter of debate. Hypotheses for a Northern Hemisphere trigger, through oceanic redistributions of heat, are based in part on the abrupt onset of warming seen in East Antarctic ice cores and dated to 18,000 years ago, which is several thousand years after high-latitude Northern Hemisphere summer insolation intensity began increasing from its minimum, approximately 24,000 years ago. An alternative explanation is that local solar insolation changes cause the Southern Hemisphere to warm independently. Here we present results from a new, annually resolved ice-core record from West Antarctica that reconciles these two views. The records show that 18,000 years ago snow accumulation in West Antarctica began increasing, coincident with increasing carbon dioxide concentrations, warming in East Antarctica and cooling in the Northern Hemisphere associated with an abrupt decrease in Atlantic meridional overturning circulation. However, significant warming in West Antarctica began at least 2,000 years earlier. Circum-Antarctic sea-ice decline, driven by increasing local insolation, is the likely cause of this warming. The marine-influenced West Antarctic records suggest a more active role for the Southern Ocean in the onset of deglaciation than is inferred from ice cores in the East Antarctic interior, which are largely isolated from sea-ice changes.

Life on ice, Antarctica and Mars

NASA Technical Reports Server (NTRS)

Anderson, D. T.; Mckay, C. P.; Wharton, Robert A., Jr.; Sagan, C.; Squyres, S. W.; Simmons, G. M.

1991-01-01

The study of the origin of life and the prospects for human exploration of Mars are two themes developed in a new 57-minute film, Life on Ice, Antarctica, and Mars, produced by the InnerSpace Foundation and WHRO Television for broadcast by the Public Broadcasting System (PBS). A brief explanation of the film and how it relates to the future human exploration of space is presented.

Remarkable antiagglomeration effect of a yeast biosurfactant, diacylmannosylerythritol, on ice-water slurry for cold thermal storage.

PubMed

Kitamoto, D; Yanagishita, H; Endo, A; Nakaiwa, M; Nakane, T; Akiya, T

2001-01-01

Antiagglomeration effects of different surfactants on ice slurry formation were examined to improve the efficiency of an ice-water slurry system to be used for cold thermal storage. Among the chemical surfactants tested, a nonionic surfactant, poly(oxyethylene) sorbitan dioleate, was found to show a greater antiagglomeration effect on the slurry than anionic, cationic, or amphoteric surfactants. More interestingly, diacylmannosylerythritol, a glycolipid biosurfactant produced by a yeast strain of Candida antarctica, exhibited a remarkable effect on the slurry, attaining a high ice packing factor (35%) for 8 h at a biosurfactant concentration of 10 mg/L. These nonionic glycolipid surfactants are likely to effectively adsorb on the ice surface in a highly regulated manner to suppress the agglomeration or growth of the ice particles. This is the first report on the utilization of biosurfactant for thermal energy storage, which may significantly expand the commercial applications of the highly environmentally friendly slurry system.

Antarctica Meta-Analysis: Psychosocial Factors Related to Long Duration Isolation and Confinement

NASA Technical Reports Server (NTRS)

Leveton, Lauren; Shea, Camille; Slack, Kelley J.; Keeton, Kathryn E.; Palinkas, Lawrence A.

2009-01-01

This meta-analysis is examining the psychological effects of wintering-over in Antarctica. As an isolated, confined, and extreme (ICE) environment, Antarctica provides invaluable opportunities to experience stressors more common to spaceflight than to the average person s everyday life. Increased prevalence of psychological symptoms, syndromes, and psychiatric disorders, as well as positive effects, are expected to be associated with various demographic and environmental factors. Implications for spaceflight are discussed. Findings from statistical review of the Antarctic articles will be shared.

Pine Island Glacier, Antarctica, MISR Multi-angle Composite

NASA Image and Video Library

2013-11-15

NASA Terra satellite passed over the Pine Island Glacier in Antarctica around Oct. 27, 2013, just days before iceberg B-31 broke completely free. B-31 is finally moving away from the coast, with open water between the iceberg and the glacier.

Deception Island, Antarctica, harbors a diverse assemblage of wood decay fungi.

PubMed

Held, Benjamin W; Blanchette, Robert A

2017-02-01

Very little is known about fungal diversity in Antarctica as compared to other biomes and how these important organisms function in this unusual ecosystem. Perhaps one of the most unusual ecosystems is that of Deception Island; an active volcanic island part of the South Shetland Islands of the Antarctic Peninsula. Here we describe the fungal diversity associated with historic wood from structures on the island, which reveals a diverse fungal assemblage of known wood decay fungi as well as the discovery of undescribed species. The major group of wood decay fungi identified were species of Cadophora and as shown in previous studies in other geographic regions of Antarctica, they caused a soft-rot type of decay in the introduced woods. Additionally, unlike other areas of Antarctica that have been studied, filamentous basidiomycetes (Hypochniciellum spp. and Pholiota spp.) were also identified that have different modes of degradation including brown and white rot. Matches of fungal sequences to known species in temperate regions likely introduced on building materials indicates human influences and volcanic activity have greatly impacted fungal diversity. Lahars (mudslides from volcanic activity) have partially buried many of the structures and the buried environment as well as the moist, warm soils provided conditions conducive for fungal growth that are not found in other regions of Antarctica. The diverse assemblage of decay fungi and different forms of wood decomposition add to the difficulty of conserving wooden structures at these important polar heritage sites. Copyright © 2016 British Mycological Society. Published by Elsevier Ltd. All rights reserved.

Microbial ecology of terrestrial Antarctica: Are microbial systems at risk from human activities?

DOE Office of Scientific and Technical Information (OSTI.GOV)

White, G.J.

1996-08-01

Many of the ecological systems found in continental Antarctica are comprised entirely of microbial species. Concerns have arisen that these microbial systems might be at risk either directly through the actions of humans or indirectly through increased competition from introduced species. Although protection of native biota is covered by the Protocol on Environmental Protection to the Antarctic Treaty, strict measures for preventing the introduction on non-native species or for protecting microbial habitats may be impractical. This report summarizes the research conducted to date on microbial ecosystems in continental Antarctica and discusses the need for protecting these ecosystems. The focus ismore » on communities inhabiting soil and rock surfaces in non-coastal areas of continental Antarctica. Although current polices regarding waste management and other operations in Antarctic research stations serve to reduce the introduction on non- native microbial species, importation cannot be eliminated entirely. Increased awareness of microbial habitats by field personnel and protection of certain unique habitats from physical destruction by humans may be necessary. At present, small-scale impacts from human activities are occurring in certain areas both in terms of introduced species and destruction of habitat. On a large scale, however, it is questionable whether the introduction of non-native microbial species to terrestrial Antarctica merits concern.« less

Occurrence of arbuscular mycorrhizal fungi on King George Island, South Shetland Islands, Antarctica.

PubMed

Barbosa, Marisângela V; Pereira, Elismara A; Cury, Juliano C; Carneiro, Marco A C

2017-01-01

Arbuscular mycorrhizal fungi make up an important ecological niche in ecosystems, and knowledge of their diversity in extreme environments is still incipient. The objective of this work was to evaluate the density and diversity of arbuscular mycorrhizal fungi in the soil of King George Island in the South Shetland Islands archipelago, Antarctica. For that, soil and roots of Deschampsia antarctica were collected at the brazilian research station in Antarctica. The spore density, species diversity and mycorrhizal colonization in the roots were evaluated. There was a low density of spores (27.4 ± 17.7) and root mycorrhizal colonization (6 ± 5.1%), which did not present statistical difference. Four species of arbuscular mycorrhizal fungi were identified, distributed in two genera: three species of the genus Glomus (Glomus sp1, Glomus sp2 and Glomus sp3) and one of the genus Acaulospora, which was identified at species level (Acaulospora mellea). Greater soil diversity was verified with pH 5.9 and phosphorus concentration of 111 mg dm-3, occurring two species of genus Glomus and A. mellea. Based on literature data, this may be the first record of this species of Acaulospora mellea in Antarctic soils, colonizing D. antarctica plants.

Wine yeasts for the future.

PubMed

Fleet, Graham H

2008-11-01

International competition within the wine market, consumer demands for newer styles of wines and increasing concerns about the environmental sustainability of wine production are providing new challenges for innovation in wine fermentation. Within the total production chain, the alcoholic fermentation of grape juice by yeasts is a key process where winemakers can creatively engineer wine character and value through better yeast management and, thereby, strategically tailor wines to a changing market. This review considers the importance of yeast ecology and yeast metabolic reactions in determining wine quality, and then discusses new directions for exploiting yeasts in wine fermentation. It covers criteria for selecting and developing new commercial strains, the possibilities of using yeasts other than those in the genus of Saccharomyces, the prospects for mixed culture fermentations and explores the possibilities for high cell density, continuous fermentations.

Phosphatase activity in Antarctica soil samples as a biosignature of extant life

NASA Astrophysics Data System (ADS)

Sato, Shuji; Itoh, Yuki; Takano, Yoshinori; Fukui, Manabu; Kaneko, Takeo; Kobayashi, Kensei

Microbial activities have been detected in such extreme terrestrial environments as deep lithosphere, a submarine hydrothermal systems, stratosphere, and Antarctica. Microorganisms have adapted to such harsh environments by evolving their biomolecules. Some of these biomolecules such as enzymes might have different characteristics from those of organisms in ordinary environments. Many biosignatures (or biomarkers) have been proposed to detect microbial activities in such extreme environments. A number of techniques are proposed to evaluate biological activities in extreme environments including cultivation methods, assay of metabolism, and analysis of bioorganic compounds like amino acids and DNA. Enzyme activities are useful signature of extant life in extreme environments. Among many enzymes, phosphatase could be a good indicator of biological activities, since phosphate esters are essential for all the living terrestrial organisms. In addition, alkaline phosphatase is known as a typical zinc-containing metalloenzyme and quite stable in environments. We analyzed phosphatase activities in Antarctica soil samples to see whether they can be used as biosignatures for extant life. In addition, we characterized phosphatases extracted from the Antarctica soil samples, and compared with those obtained from other types of environments. Antarctica surface environments are quite severe environments for life since it is extremely cold and dry and exposed to strong UV and cosmic rays. We tried to evaluate biological activities in Antarctica by measuring phosphatase activities. Surface soil samples are obtained at the Sites 1-8 near Showa Base in Antarctica during the 47th Japan Antarctic exploration mission in 2005-6. Activities of acid phosphatase (ACP) and alkaline phosphatase (ALP) are measured spectrophotometrically after mixing the powdered sample and p-nitrophenyl phosphate solution (pH 6.5 for ACP, pH 8.0 for ALP). ALP was characterized after extraction from soils with

First photometric properties of Dome C, Antarctica

NASA Astrophysics Data System (ADS)

Chadid, M.; Vernin, J.; Jeanneaux, F.; Mekarnia, D.; Trinquet, H.

2008-07-01

Here we present the first photometric extinction measurements in the visible range performed at Dome C in Antarctica, using PAIX photometer (Photometer AntarctIca eXtinction). It is made with "off the shelf" components, Audine camera at the focus of Blazhko telescope, a Meade M16 diaphragmed down to 15 cm. For an exposure time of 60 s without filter, a 10th V-magnitude star is measured with a precision of 1/100 mag. A first statistics over 16 nights in August 2007 leads to a 0.5 magnitude per air mass extinction, may be due to high altitude cirrus. This rather simple experiment shows that continuous observations can be performed at Dome C, allowing high frequency resolution on pulsation and asteroseismology studies. Light curves of one of RR Lyrae stars: SAra were established. They show the typical trend of a RRLyrae star. A recent sophisticated photometer, PAIX II, has been installed recently at Dome C during polar summer 2008, with a ST10 XME camera, automatic guiding, auto focusing and Johnson/Bessel UBVRI filter wheels.

Discussion of teleomorphic and anamorphic Ascomycetous yeasts and yeast-like taxa

USDA-ARS?s Scientific Manuscript database

The relationship of ascomycetous yeasts with other members of the ascomycete fungi (Ascomycota) has been controversial for over 100 years. Because yeasts are morphologically simple, it was proposed that they represent primitive forms of ascomycetes (e.g., Guilliermond 1912). Alternatively, the ide...

Yeasts and yeast-like organisms associated with fruits and blossoms of different fruit trees.

PubMed

Vadkertiová, Renáta; Molnárová, Jana; Vránová, Dana; Sláviková, Elena

2012-12-01

Yeasts are common inhabitants of the phyllosphere, but our knowledge of their diversity in various plant organs is still limited. This study focused on the diversity of yeasts and yeast-like organisms associated with matured fruits and fully open blossoms of apple, plum, and pear trees, during 2 consecutive years at 3 localities in southwest Slovakia. The occurrence of yeasts and yeast-like organisms in fruit samples was 2½ times higher and the yeast community more diverse than that in blossom samples. Only 2 species (Aureobasidium pullulans and Metschnikowia pulcherrima) occurred regularly in the blossom samples, whereas Galactomyces candidus, Hanseniaspora guilliermondii, Hanseniaspora uvarum, M. pulcherrima, Pichia kluyveri, Pichia kudriavzevii, and Saccharomyces cerevisiae were the most frequently isolated species from the fruit samples. The ratio of the number of samples where only individual species were present to the number of samples where 2 or more species were found (consortium) was counted. The occurrence of individual species in comparison with consortia was much higher in blossom samples than in fruit samples. In the latter, consortia predominated. Aureobasidium pullulans, M. pulcherrima, and S. cerevisiae, isolated from both the fruits and blossoms, can be considered as resident yeast species of various fruit tree species cultivated in southwest Slovakia localities.

Antarctica: Is It More Than Just Ice?

ERIC Educational Resources Information Center

Johnson, Cheryl; Gutierrez, Melida

2009-01-01

The authors introduced polar science in a fourth-grade classroom by means of 3 hands-on activities that addressed (1) the melting of glaciers and ice, (2) the differences between the North and the South Pole, and (3) the geography and landforms of Antarctica. An assessment 4 months after the original activity showed that students remembered the…

Forces in yeast flocculation

NASA Astrophysics Data System (ADS)

El-Kirat-Chatel, Sofiane; Beaussart, Audrey; Vincent, Stéphane P.; Abellán Flos, Marta; Hols, Pascal; Lipke, Peter N.; Dufrêne, Yves F.

2015-01-01

In the baker's yeast Saccharomyces cerevisiae, cell-cell adhesion (``flocculation'') is conferred by a family of lectin-like proteins known as the flocculin (Flo) proteins. Knowledge of the adhesive and mechanical properties of flocculins is important for understanding the mechanisms of yeast adhesion, and may help controlling yeast behaviour in biotechnology. We use single-molecule and single-cell atomic force microscopy (AFM) to explore the nanoscale forces engaged in yeast flocculation, focusing on the role of Flo1 as a prototype of flocculins. Using AFM tips labelled with mannose, we detect single flocculins on Flo1-expressing cells, showing they are widely exposed on the cell surface. When subjected to force, individual Flo1 proteins display two distinct force responses, i.e. weak lectin binding forces and strong unfolding forces reflecting the force-induced extension of hydrophobic tandem repeats. We demonstrate that cell-cell adhesion bonds also involve multiple weak lectin interactions together with strong unfolding forces, both associated with Flo1 molecules. Single-molecule and single-cell data correlate with microscale cell adhesion behaviour, suggesting strongly that Flo1 mechanics is critical for yeast flocculation. These results favour a model in which not only weak lectin-sugar interactions are involved in yeast flocculation but also strong hydrophobic interactions resulting from protein unfolding.

The yeast actin cytoskeleton.

PubMed

Mishra, Mithilesh; Huang, Junqi; Balasubramanian, Mohan K

2014-03-01

The actin cytoskeleton is a complex network of dynamic polymers, which plays an important role in various fundamental cellular processes, including maintenance of cell shape, polarity, cell division, cell migration, endocytosis, vesicular trafficking, and mechanosensation. Precise spatiotemporal assembly and disassembly of actin structures is regulated by the coordinated activity of about 100 highly conserved accessory proteins, which nucleate, elongate, cross-link, and sever actin filaments. Both in vivo studies in a wide range of organisms from yeast to metazoans and in vitro studies of purified proteins have helped shape the current understanding of actin dynamics and function. Molecular genetics, genome-wide functional analysis, sophisticated real-time imaging, and ultrastructural studies in concert with biochemical analysis have made yeast an attractive model to understand the actin cytoskeleton, its molecular dynamics, and physiological function. Studies of the yeast actin cytoskeleton have contributed substantially in defining the universal mechanism regulating actin assembly and disassembly in eukaryotes. Here, we review some of the important insights generated by the study of actin cytoskeleton in two important yeast models the budding yeast Saccharomyces cerevisiae and the fission yeast Schizosaccharomyces pombe. © 2014 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

[Thermoresistance in Saccharomyces cerevisiae yeasts].

PubMed

Kaliuzhin, V A

2011-01-01

Under natural conditions, yeast Saccharomyces cerevisiae reproduce, as a rule, on the surface of solid or liquid medium. Thus, life cycle of yeast populations is substantially influenced by diurnal changes in ambient temperature. The pattern in the response of unrestricted yeast S. cerevisiae culture to changes in the temperature of cultivation is revealed experimentally. Yeast population, in the absence of environmental constraints on the functioning of cell chemosmotic bioenergetic system, demonstrates the ability of thermoresistance when the temperature of cultivation switches from the range of 12-36 degrees C to 37.5-40 degrees C. During the transient period that is associated with the temperature switching and lasts from 1 to 4 turnover cycles, yeast reproduction rate remains 1.5-2 times higher than under stationary conditions. This is due to evolutionary acquired adaptive activity of cell chemosmotic system. After the adaptive resources exhausting, yeast thermoresistance fully recovers at the temperature range of 12-36 degrees C within one generation time under conditions of both restricted and unrestricted nourishment. Adaptive significance of such thermoresistance seems obvious enough--it allows maintaining high reproduction rate in yeast when ambient temperature is reaching a brief maximum shortly after noon.

Interaction Between Yeasts and Zinc

NASA Astrophysics Data System (ADS)

Nicola, Raffaele De; Walker, Graeme

Zinc is an essential trace element in biological systems. For example, it acts as a cellular membrane stabiliser, plays a critical role in gene expression and genome modification and activates nearly 300 enzymes, including alcohol dehydrogenase. The present chapter will be focused on the influence of zinc on cell physiology of industrial yeast strains of Saccharomyces cerevisiae, with special regard to the uptake and subsequent utilisation of this metal. Zinc uptake by yeast is metabolism-dependent, with most of the available zinc translocated very quickly into the vacuole. At cell division, zinc is distributed from mother to daughter cells and this effectively lowers the individual cellular zinc concentration, which may become zinc depleted at the onset of the fermentation. Zinc influences yeast fermentative performance and examples will be provided relating to brewing and wine fermentations. Industrial yeasts are subjected to several stresses that may impair fermentation performance. Such stresses may also impact on yeast cell zinc homeostasis. This chapter will discuss the practical implications for the correct management of zinc bioavailability for yeast-based biotechnologies aimed at improving yeast growth, viability, fermentation performance and resistance to environmental stresses

21 CFR 172.896 - Dried yeasts.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 21 Food and Drugs 3 2014-04-01 2014-04-01 false Dried yeasts. 172.896 Section 172.896 Food and... PERMITTED FOR DIRECT ADDITION TO FOOD FOR HUMAN CONSUMPTION Multipurpose Additives § 172.896 Dried yeasts. Dried yeast (Saccharomyces cerevisiae and Saccharomyces fragilis) and dried torula yeast (Candida utilis...

Combined Analysis of the Chloroplast Genome and Transcriptome of the Antarctic Vascular Plant Deschampsia antarctica Desv

PubMed Central

Lee, Jungeun; Kang, Yoonjee; Shin, Seung Chul; Park, Hyun; Lee, Hyoungseok

2014-01-01

Background Antarctic hairgrass (Deschampsia antarctica Desv.) is the only natural grass species in the maritime Antarctic. It has been researched as an important ecological marker and as an extremophile plant for studies on stress tolerance. Despite its importance, little genomic information is available for D. antarctica. Here, we report the complete chloroplast genome, transcriptome profiles of the coding/noncoding genes, and the posttranscriptional processing by RNA editing in the chloroplast system. Results The complete chloroplast genome of D. antarctica is 135,362 bp in length with a typical quadripartite structure, including the large (LSC: 79,881 bp) and small (SSC: 12,519 bp) single-copy regions, separated by a pair of identical inverted repeats (IR: 21,481 bp). It contains 114 unique genes, including 81 unique protein-coding genes, 29 tRNA genes, and 4 rRNA genes. Sequence divergence analysis with other plastomes from the BEP clade of the grass family suggests a sister relationship between D. antarctica, Festuca arundinacea and Lolium perenne of the Poeae tribe, based on the whole plastome. In addition, we conducted high-resolution mapping of the chloroplast-derived transcripts. Thus, we created an expression profile for 81 protein-coding genes and identified ndhC, psbJ, rps19, psaJ, and psbA as the most highly expressed chloroplast genes. Small RNA-seq analysis identified 27 small noncoding RNAs of chloroplast origin that were preferentially located near the 5′- or 3′-ends of genes. We also found >30 RNA-editing sites in the D. antarctica chloroplast genome, with a dominance of C-to-U conversions. Conclusions We assembled and characterized the complete chloroplast genome sequence of D. antarctica and investigated the features of the plastid transcriptome. These data may contribute to a better understanding of the evolution of D. antarctica within the Poaceae family for use in molecular phylogenetic studies and may also help researchers understand the

Combined analysis of the chloroplast genome and transcriptome of the Antarctic vascular plant Deschampsia antarctica Desv.

PubMed

Lee, Jungeun; Kang, Yoonjee; Shin, Seung Chul; Park, Hyun; Lee, Hyoungseok

2014-01-01

Antarctic hairgrass (Deschampsia antarctica Desv.) is the only natural grass species in the maritime Antarctic. It has been researched as an important ecological marker and as an extremophile plant for studies on stress tolerance. Despite its importance, little genomic information is available for D. antarctica. Here, we report the complete chloroplast genome, transcriptome profiles of the coding/noncoding genes, and the posttranscriptional processing by RNA editing in the chloroplast system. The complete chloroplast genome of D. antarctica is 135,362 bp in length with a typical quadripartite structure, including the large (LSC: 79,881 bp) and small (SSC: 12,519 bp) single-copy regions, separated by a pair of identical inverted repeats (IR: 21,481 bp). It contains 114 unique genes, including 81 unique protein-coding genes, 29 tRNA genes, and 4 rRNA genes. Sequence divergence analysis with other plastomes from the BEP clade of the grass family suggests a sister relationship between D. antarctica, Festuca arundinacea and Lolium perenne of the Poeae tribe, based on the whole plastome. In addition, we conducted high-resolution mapping of the chloroplast-derived transcripts. Thus, we created an expression profile for 81 protein-coding genes and identified ndhC, psbJ, rps19, psaJ, and psbA as the most highly expressed chloroplast genes. Small RNA-seq analysis identified 27 small noncoding RNAs of chloroplast origin that were preferentially located near the 5'- or 3'-ends of genes. We also found >30 RNA-editing sites in the D. antarctica chloroplast genome, with a dominance of C-to-U conversions. We assembled and characterized the complete chloroplast genome sequence of D. antarctica and investigated the features of the plastid transcriptome. These data may contribute to a better understanding of the evolution of D. antarctica within the Poaceae family for use in molecular phylogenetic studies and may also help researchers understand the characteristics of the chloroplast

Transcriptome of the Antarctic amphipod Gondogeneia antarctica and its response to pollutant exposure.

PubMed

Kang, Seunghyun; Kim, Sanghee; Park, Hyun

2015-12-01

Gondogeneia antarctica is widely distributed off the western Antarctic Peninsula and is a key species in the Antarctic food web. In this study, we performed Illumina sequencing to produce a total of 4,599,079,601 (4.6Gb) nucleotides and a comprehensive transcript dataset for G. antarctica. Over 46 million total reads were assembled into 20,749 contigs, and 12,461 annotated genes were predicted by Blastx. The RNA-seq results after exposure to three pollutants showed that 658, 169 and 367 genes that were potential biomarkers of responses to pollutants for this species were specifically upregulated after exposure to PCBs (Polychlorinated biphenyls), PFOS (Perfluorooctanesulfonic acid) and PFOA (Perfluorooctanoic acid), respectively. These data represent the first transcriptome resource for the Antarctic amphipod G. antarctica and provide a useful resource for studying Antarctic marine species. Copyright © 2015 Elsevier B.V. All rights reserved.

Modelling of mineral dust for interglacial and glacial climate conditions with a focus on Antarctica

DOE PAGES

Sudarchikova, Natalia; Mikolajewicz, Uwe; Timmreck, C.; ...

2015-05-19

The mineral dust cycle responds to climate variations and plays an important role in the climate system by affecting the radiative balance of the atmosphere and modifying biogeochemistry. Polar ice cores provide unique information about deposition of aeolian dust particles transported over long distances. These cores are a palaeoclimate proxy archive of climate variability thousands of years ago. The current study is a first attempt to simulate past interglacial dust cycles with a global aerosol–climate model ECHAM5-HAM. The results are used to explain the dust deposition changes in Antarctica in terms of quantitative contribution of different processes, such as emission,more » atmospheric transport and precipitation, which will help to interpret palaeodata from Antarctic ice cores. The investigated periods include four interglacial time slices: the pre-industrial control (CTRL), mid-Holocene (6000 yr BP; hereafter referred to as \\"6 kyr\\"), last glacial inception (115 000 yr BP; hereafter \\"115 kyr\\") and Eemian (126 000 yr BP; hereafter \\"126 kyr\\"). One glacial time interval, the Last Glacial Maximum (LGM) (21 000 yr BP; hereafter \\"21 kyr\\"), was simulated as well to be a reference test for the model. Results suggest an increase in mineral dust deposition globally, and in Antarctica, in the past interglacial periods relative to the pre-industrial CTRL simulation. Approximately two-thirds of the increase in the mid-Holocene and Eemian is attributed to enhanced Southern Hemisphere dust emissions. Slightly strengthened transport efficiency causes the remaining one-third of the increase in dust deposition. The moderate change in dust deposition in Antarctica in the last glacial inception period is caused by the slightly stronger poleward atmospheric transport efficiency compared to the pre-industrial. Maximum dust deposition in Antarctica was simulated for the glacial period. LGM dust deposition in Antarctica is substantially increased due to 2.6 times

21 CFR 172.896 - Dried yeasts.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 21 Food and Drugs 3 2011-04-01 2011-04-01 false Dried yeasts. 172.896 Section 172.896 Food and... Multipurpose Additives § 172.896 Dried yeasts. Dried yeast (Saccharomyces cerevisiae and Saccharomyces fragilis) and dried torula yeast (Candida utilis) may be safely used in food provided the total folic acid...

21 CFR 172.896 - Dried yeasts.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 21 Food and Drugs 3 2013-04-01 2013-04-01 false Dried yeasts. 172.896 Section 172.896 Food and... Multipurpose Additives § 172.896 Dried yeasts. Dried yeast (Saccharomyces cerevisiae and Saccharomyces fragilis) and dried torula yeast (Candida utilis) may be safely used in food provided the total folic acid...

21 CFR 172.896 - Dried yeasts.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Dried yeasts. 172.896 Section 172.896 Food and... Multipurpose Additives § 172.896 Dried yeasts. Dried yeast (Saccharomyces cerevisiae and Saccharomyces fragilis) and dried torula yeast (Candida utilis) may be safely used in food provided the total folic acid...

21 CFR 172.896 - Dried yeasts.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 21 Food and Drugs 3 2012-04-01 2012-04-01 false Dried yeasts. 172.896 Section 172.896 Food and... Multipurpose Additives § 172.896 Dried yeasts. Dried yeast (Saccharomyces cerevisiae and Saccharomyces fragilis) and dried torula yeast (Candida utilis) may be safely used in food provided the total folic acid...

U.S. Geological Survey Scientific Activities in the Exploration of Antarctica: Introduction to Antarctica (Including USGS Field Personnel: 1946-59)

USGS Publications Warehouse

Tony K. Meunier Edited by Williams, Richard S.; Ferrigno, Jane G.

2007-01-01

3) significant changes that have occurred in Antarctic exploration and research since World War II will be discussed at the end of this report. Subsequent Open-File Reports will provide a year-by-year documentation of USGS scientific activities and accomplishments in Antarctica beginning with the post-IGY, 1959-60 research team. One Open-File Report is planned to be written for each field-based season. For an example of the series format, see Open-File Reports 2006-1113 (Meunier, 2007a) and 2006-1114 (Meunier, 2007b). This report is a companion document to Open-File Report 2006-1116 (Meunier, 2007c). The USGS mapping and science programs in Antarctica are among the longest continuously funded projects in the United States Antarctic Program (USAP). The 2005-06 field season is the 56th consecutive U.S. expedition in which USGS scientists have been participants, starting in 1946. USGS and the National Science Foundation (NSF) cooperation began with the establishment by NSF of the U.S. Antarctic (Research) Program [USA(R)P] in 1958-59 under Operation Deep Freeze IV (DF IV) and was given the responsibility for the principal coordination and management of all U.S. scientific activities in Antarctica in Deep Freeze 60 (DF 60) (1959-60). Financial support from NSF, mostly in the form of Memorandum of Understandings (MOUs) and Cooperative Agreements, extends back to this period and can be attributed to the need for accurate geologic, geophysical, and topographic base maps of specific field areas or regions where NSF-funded science projects were planned. The epoch of Antarctic exploration during the IGY was driven by science and, in a spirit of peaceful cooperation, the international scientific community wanted to limit military activities on the continent to logistical support (Meunier, 1979 [2007], p. 38). The USGS, a Federal civilian science agency in the Department of the Interior, has, since its founding in 1879, carried out numerous field-based national (and some

Ice crystal precipitation at Dome C site (East Antarctica)

NASA Astrophysics Data System (ADS)

Santachiara, G.; Belosi, F.; Prodi, F.

2016-01-01

For the first time, falling ice crystals were collected on glass slides covered with a thin layer of 2% formvar in chloroform at the Dome Concordia site (Dome C), Antarctica. Samplings were performed in the framework of the 27th Italian Antarctica expedition of the Italian National Program for Research in Antarctica in the period 21 February-6 August 2012. Events of clear-sky precipitations and precipitations from clouds were considered and the replicas obtained were examined under Scanning Electron Microscope (SEM). Several shapes of ice crystals were identified, including ;diamond dust; (plates, pyramids, hollow and solid columns), and crystal aggregates varying in complexity. Single events often contained both small (10 μm to 50 μm) and large (hundreds of microns) crystals, suggesting that crystals can form simultaneously near the ground (height of a few hundred metres) and at higher layers (height of thousands of metres). Images of sampled crystal replicas showed that single bullets are not produced separately, but by the disintegration of combinations of bullets. Rimed ice crystals were absent in the Dome C samples, i.e. the only mode of crystal growth was water vapour diffusion. On considering the aerosol in the sampled crystals, we reached the conclusion that inertial impaction, interception and Brownian motion were insufficient to explain the scavenged aerosol. We therefore presume that phoretic forces play a role in scavenging during the crystal growth process.

Icefall, Lambert Glacier, Antarctica

NASA Image and Video Library

2017-12-08

Image taken 12/2/2000: The Lambert Glacier in Antarctica, is the world's largest glacier. The focal point of this image is an icefall that feeds into the Lambert glacier from the vast ice sheet covering the polar plateau. Ice flows like water, albeit much more slowly. Cracks can be seen in this icefall as it bends and twists on its slow-motion descent 1300 feet (400 meters) to the glacier below. This Icefall can be found on Landsat 7 WRS Path 42 Row 133/134/135, center: -70.92, 69.15. To learn more about the Landsat satellite go to: landsat.gsfc.nasa.gov/

Detection and Analysis of Complex Patterns of Ice Dynamics in Antarctica from ICESat Laser Altimetry

NASA Astrophysics Data System (ADS)

Babonis, Gregory Scott

There remains much uncertainty in estimating the amount of Antarctic ice mass change, its dynamic component, and its spatial and temporal patterns. This work remedies the limitations of previous studies by generating the first detailed reconstruction of total and dynamic ice thickness and mass changes across Antarctica, from ICESat satellite altimetry observations in 2003-2009 using the Surface Elevation Reconstruction and Change Detection (SERAC) method. Ice sheet thickness changes are calculated with quantified error estimates for each time when ICESat flew over a ground-track crossover region, at approximately 110,000 locations across the Antarctic Ice Sheet. The time series are partitioned into changes due to surficial processes and ice dynamics. The new results markedly improve the spatial and temporal resolution of surface elevation, volume, and mass change rates for the AIS, and can be sampled at annual temporal resolutions. The results indicate a complex spatiotemporal pattern of dynamic mass loss in Antarctica, especially along individual outlet glaciers, and allow for the quantification of the annual contribution of Antarctic ice loss to sea level rise. Over 5000 individual locations exhibit either strong dynamic ice thickness change patterns, accounting for approximately 500 unique spatial clusters that identify regions likely influenced by subglacial hydrology. The spatial distribution and temporal behavior of these regions reveal the complexity and short-time scale variability in the subglacial hydrological system. From the 500 unique spatial clusters, over 370 represent newly identified, and not previously published, potential subglacial water bodies indicating an active subglacial hydrological system over a much larger region than previously observed. These numerous new observations of dynamic changes provide more than simply a larger set of data. Examination of both regional and local scale dynamic change patterns across Antarctica shows newly

Yeast flocculation: New story in fuel ethanol production.

PubMed

Zhao, X Q; Bai, F W

2009-01-01

Yeast flocculation has been used in the brewing industry to facilitate biomass recovery for a long time, and thus its mechanism of yeast flocculation has been intensively studied. However, the application of flocculating yeast in ethanol production garnered attention mainly in the 1980s and 1990s. In this article, updated research progress in the molecular mechanism of yeast flocculation and the impact of environmental conditions on yeast flocculation are reviewed. Construction of flocculating yeast strains by genetic approach and utilization of yeast flocculation for ethanol production from various feedstocks were presented. The concept of self-immobilized yeast cells through their flocculation is revisited through a case study of continuous ethanol fermentation with the flocculating yeast SPSC01, and their technical and economic advantages are highlighted by comparing with yeast cells immobilized with supporting materials and regular free yeast cells as well. Taking the flocculating yeast SPSC01 as an example, the ethanol tolerance of the flocculating yeast was also discussed.

Geophysical investigations of the tectonic boundary between East and West Antarctica

USGS Publications Warehouse

ten Brink, Uri S.; Bannister, S.; Beaudoin, B.C.; Stern, T.A.

1993-01-01

The Transantarctic Mountains (TAM), which separate the West Antarctic rift system from the stable shield of East Antarctica, are the largest mountains developed adjacent to a rift. The cause of uplift of mountains bordering rifts is poorly understood. One notion based on observations of troughs next to many uplifted blocks is that isostatic rebound produces a coeval uplift and subsidence. The results of an over-snow seismic experiment in Antarctica do not show evidence for a trough next to the TAM but indicate the extension of rifted mantle lithosphere under the TAM. Furthermore, stretching preceded the initiation of uplift, which suggests thermal buoyancy as the cause for uplift.

Brewing characteristics of piezosensitive sake yeasts

NASA Astrophysics Data System (ADS)

Nomura, Kazuki; Hoshino, Hirofumi; Igoshi, Kazuaki; Onozuka, Haruka; Tanaka, Erika; Hayashi, Mayumi; Yamazaki, Harutake; Takaku, Hiroaki; Iguchi, Akinori; Shigematsu, Toru

2018-04-01

Application of high hydrostatic pressure (HHP) treatment to food processing is expected as a non-thermal fermentation regulation technology that supresses over fermentation. However, the yeast Saccharomyces cerevisiae used for Japanese rice wine (sake) brewing shows high tolerance to HHP. Therefore, we aimed to generate pressure-sensitive (piezosensitive) sake yeast strains by mating sake with piezosensitive yeast strains to establish an HHP fermentation regulation technology and extend the shelf life of fermented foods. The results of phenotypic analyses showed that the generated yeast strains were piezosensitive and exhibited similar fermentation ability compared with the original sake yeast strain. In addition, primary properties of sake brewed using these strains, such as ethanol concentration, sake meter value and sake flavor compounds, were almost equivalent to those obtained using the sake yeast strain. These results suggest that the piezosensitive strains exhibit brewing characteristics essentially equivalent to those of the sake yeast strain.

Geodesy in Antarctica: A pilot study based on the TAMDEF GPS network, Victoria Land, Antarctica

NASA Astrophysics Data System (ADS)

Vazquez Becerra, Guadalupe Esteban

The objective of the research presented in this dissertation is a combination of practical and theoretical problems to investigate unique aspects of GPS (Global Positioning System) geodesy in Antarctica. This is derived from a complete analysis of a GPS network called TAMDEF (Trans Antarctic Mountains Deformation), located in Victoria Land, Antarctica. In order to permit access to the International Terrestrial Reference Frame (ITRF), the McMurdo (MCM4) IGS (The International GNSS Service for Geodynamics, formerly the International GPS Service) site was adopted as part of the TAMDEF network. The following scientific achievements obtained from the cited analysis will be discussed as follows: (1) The GPS data processing for the TAMDEF network relied on the PAGES (Program for Adjustment of GPS Ephemerides) software that uses the double-differenced iono-free linear combination, which helps removing a big partial of bias (mm level) in the final positioning. (2) To validate the use of different antenna types in TAMDEF, an antenna testing experiment was conducted using the National Geodetic Survey (NGS) antenna calibration data, appropriate for each antenna type. Sub-daily and daily results from the antenna testing are at the sub-millimeter level, based on the fact that 24-hour solutions were used to average any possible bias. (3) A potential contributor that might have an impact on the TAMDEF stations positioning is the pseudorange multipath effect; thus, the root mean squared variations were estimated and analyzed in order to identify the most and least affected sites. MCM4 was found to be the site with highest multipath, and this is not good at all, since MCM4 is the primary ITRF access point for this part of Antarctica. Additionally, results from the pseudorange multipath can be used for further data cleaning to improve positioning results. (4) The Ocean Tide Modeling relied on the use of two models: CATS02.01 (Circum Antarctic Tidal Simulation) and TPXO6.2 (TOPEX

21 CFR 172.898 - Bakers yeast glycan.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 21 Food and Drugs 3 2014-04-01 2014-04-01 false Bakers yeast glycan. 172.898 Section 172.898 Food... Bakers yeast glycan. Bakers yeast glycan may be safely used in food in accordance with the following conditions: (a) Bakers yeast glycan is the comminuted, washed, pasteurized, and dried cell walls of the yeast...

Opportunistic Pathogenic Yeasts

NASA Astrophysics Data System (ADS)

Banerjee, Uma

Advances in medical research, made during the last few decades, have improved the prophylactic, diagnostic and therapeutic capabilities for variety of infections/diseases. However, many of the prophylactic and therapeutic procedures have been seen in many instances to exact a price of host-vulnerability to an expanding group of opportunistic pathogens and yeasts are one of the important members in it. Fortunately amongst the vast majority of yeasts present in nature only few are considered to have the capability to cause infections when certain opportunities predisposes and these are termed as ‘opportunistic pathogenic yeasts.’ However, the term ‘pathogenic’ is quite tricky, as it depends of various factors of the host, the ‘bug’ and the environment to manifest the clinical infection. The borderline is expanding. In the present century with unprecedented increase in number of immune-compromised host in various disciplines of health care settings, where any yeast, which has the capability to grow at 37 ° C (normal body temperature of human), can be pathogenic and cause infection in particular situation

Diamictite from Nimrod Glacier area, Antarctica: Possible Proterozoic glaciation on the seventh continent

NASA Astrophysics Data System (ADS)

Stump, Edmund; Miller, Julia M. G.; Korsch, Russell J.; Edgerton, David G.

1988-03-01

Late Proterozoic glacial deposits have been found on all continents except Antarctica. Here we describe four units of Late Proterozoic diamictite, with a total thickness of about 10m, from Panorama Point, Nimrod Glacier area, Antarctica, which have characteristics compatible with glaciogenic origin. The diamictite occurs within the Goldie Formation, a sequence of marine turbidites, and is associated with a unit of mafic pillow lavas. The diamictite is commonly structureless and in places laminated. Coarse clasts occur as scattered pebbles and cobbles and as pebbly pods and beds. No striated or faceted clasts were found. A few pebbles may pierce the laminae, but a drop-stone origin is uncertain. Deformation and metamorphism have obscured subtleties of original sedimentary structure. Outsize clasts in laminated sandy siltstone (now schistose) suggest a glaciogenic origin for these diamictites, but deposition by mass-flow processes cannot be ruled out. The discovery in Antarctica of possible Late Proterozoic glaciogenic deposits extends their geographic distribution to all of the major continental masses.

How increasing CO2 leads to an increased negative greenhouse effect in Antarctica

NASA Astrophysics Data System (ADS)

Schmithüsen, Holger; Notholt, Justus; König-Langlo, Gert; Lemke, Peter; Jung, Thomas

2015-12-01

CO2 is the strongest anthropogenic forcing agent for climate change since preindustrial times. Like other greenhouse gases, CO2 absorbs terrestrial surface radiation and causes emission from the atmosphere to space. As the surface is generally warmer than the atmosphere, the total long-wave emission to space is commonly less than the surface emission. However, this does not hold true for the high elevated areas of central Antarctica. For this region, the emission to space is higher than the surface emission; and the greenhouse effect of CO2 is around zero or even negative, which has not been discussed so far. We investigated this in detail and show that for central Antarctica an increase in CO2 concentration leads to an increased long-wave energy loss to space, which cools the Earth-atmosphere system. These findings for central Antarctica are in contrast to the general warming effect of increasing CO2.

Paleomagnetic study of the northern Ford Ranges, western Marie Byrd Land, West Antarctica: Motion between West and East Antarctica

NASA Astrophysics Data System (ADS)

Luyendyk, Bruce; Cisowski, Stan; Smith, Christine; Richard, Steve; Kimbrough, David

1996-02-01

A paleomagnetic study of Paleozoic and Mesozoic crystalline rocks in the northern Ford Ranges of Marie Byrd Land, West Antarctica, has determined a middle Cretaceous (circa 100 Ma) paleomagnetic pole and provided constraints on possible clockwise rotation of these ranges and on the rifting of east Gondwana. The 40Ar/39Ar thermochronology data from the Fosdick Mountains record a period of rapid cooling from ˜700°C beginning at ˜100 Ma. We relate this to extension, intrusion, and uplift associated with the beginning of rifting between Campbell Plateau and Marie Byrd Land. All rocks from the Fosdick and Chester Mountains are normally polarized. We interpret thermochronology and paleomagnetic data to infer that the region was extensively remagnetized in middle Cretaceous time. Inclinations in samples from the Chester Mountains are less steep than those from the Fosdick Mountains, which we interpret as ˜25° of south tilting of the Chesters. We interpret cooling age data for the time of magnetization to infer that the tilting began after 105 Ma and ended prior to 103 Ma. We further interpret this as constraining the beginning of extension between the Campbell Plateau and western Marie Byrd Land to the interval 105 to 103 Ma. Virtual geomagnetic poles from samples of Early Carboniferous age granodiorite from the western Phillips Mountains lie on the late Paleozoic apparent polar wander path for Australia transferred to Antarctica. Directions from 29 sites in the central and eastern Phillips and Fosdick Mountains give a Middle Cretaceous paleomagnetic pole at 222.3° E, 70.5° S (A95 6.1°, KAPPA 20.0). This pole is indistinguishable from other Middle Cretaceous poles for studies further east in Marie Byrd Land. Combining middle Cretaceous poles determined for three other studies of the Antarctic Peninsula, Thurston Island, and the Ruppert-Hobbs coasts with ours gives a Pacific West Antarctic pole at 215.2° E, 73.5° S (A95 4.0°, KAPPA 528.9). This pole is

Mezozooplankton Beneath the Summer Sea Ice in McMurdo Sound, Antarctica: Abundance, Species Composition, and DMSP content

EPA Science Inventory

The Ross Sea Phaeocystis antarctica bloom contributes to a summer increase in under-ice planton biomass in McMurdo Sound, Antarctica. Due to difficulties of under-ice sampling, information on the mesozooplankton in McMurdo Sound is limited. We measured the abundance of mesooopl...

Yeast Droplets

NASA Astrophysics Data System (ADS)

Nguyen, Baochi; Upadhyaya, Arpita; van Oudenaarden, Alexander; Brenner, Michael

2002-11-01

It is well known that the Young's law and surface tension govern the shape of liquid droplets on solid surfaces. Here we address through experiments and theory the shape of growing aggregates of yeast on agar substrates, and assess whether these ideas still hold. Experiments are carried out on Baker's yeast, with different levels of expressions of an adhesive protein governing cell-cell and cell-substrate adhesion. Changing either the agar concentration or the expression of this protein modifies the local contact angle of a yeast droplet. When the colony is small, the shape is a spherical cap with the contact angle obeying Young's law. However, above a critical volume this structure is unstable, and the droplet becomes nonspherical. We present a theoretical model where this instability is caused by bulk elastic effects. The model predicts that the transition depends on both volume and contact angle, in a manner quantitatively consistent with our experiments.

Not your ordinary yeast: non-Saccharomyces yeasts in wine production uncovered.

PubMed

Jolly, Neil P; Varela, Cristian; Pretorius, Isak S

2014-03-01

Saccharomyces cerevisiae and grape juice are 'natural companions' and make a happy wine marriage. However, this relationship can be enriched by allowing 'wild' non-Saccharomyces yeast to participate in a sequential manner in the early phases of grape must fermentation. However, such a triangular relationship is complex and can only be taken to 'the next level' if there are no spoilage yeast present and if the 'wine yeast' - S. cerevisiae - is able to exert its dominance in time to successfully complete the alcoholic fermentation. Winemakers apply various 'matchmaking' strategies (e.g. cellar hygiene, pH, SO2 , temperature and nutrient management) to keep 'spoilers' (e.g. Dekkera bruxellensis) at bay, and allow 'compatible' wild yeast (e.g. Torulaspora delbrueckii, Pichia kluyveri, Lachancea thermotolerans and Candida/Metschnikowia pulcherrima) to harmonize with potent S. cerevisiae wine yeast and bring the best out in wine. Mismatching can lead to a 'two is company, three is a crowd' scenario. More than 40 of the 1500 known yeast species have been isolated from grape must. In this article, we review the specific flavour-active characteristics of those non-Saccharomyces species that might play a positive role in both spontaneous and inoculated wine ferments. We seek to present 'single-species' and 'multi-species' ferments in a new light and a new context, and we raise important questions about the direction of mixed-fermentation research to address market trends regarding so-called 'natural' wines. This review also highlights that, despite the fact that most frontier research and technological developments are often focussed primarily on S. cerevisiae, non-Saccharomyces research can benefit from the techniques and knowledge developed by research on the former. © 2013 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

Tectonic development of West Antarctica and its relation to East Antarctica

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dalziel, I.W.D.

1987-09-01

Over several years, the author has compiled data and conducted field research to gain an understanding of the relationship between East and West Antarctica through geologic time. The investigations have focused on the Scotia Arc and the region at the base of the Antarctic Peninsula extending to the Ellsworth, Thiel, and Whitmore mountains. During the 1983-1984 austral summer, US and British geologists began an intensive investigation in the Ellsworth Mountains and Martin Hills, at Mount Smart, and near Siple Station. Field work includes geology, paleomagnetism, geochronology, and geophysics, with radio-echo sounding and aeromagnetic surveys conducted by British geophysicists. This investigationmore » attempts to define the limits of the crustal blocks and determine the tectonic nature of the ice-covered area between them.« less

Tracking human footprints in Antarctica through passive sampling of polycyclic aromatic hydrocarbons in inland lakes.

PubMed

Yao, Yao; Meng, Xiang-Zhou; Wu, Chen-Chou; Bao, Lian-Jun; Wang, Feng; Wu, Feng-Chang; Zeng, Eddy Y

2016-06-01

Freely dissolved polycyclic aromatic hydrocarbons (PAHs) were monitored in seven inland lakes of Antarctica by a polyethylene (PE)-based passive sampling technique, with the objective of tracking human footprints. The measured concentrations of PAHs were in the range of 14-360 ng L(-1) with the highest values concentrated around the Russian Progress II Station, indicating the significance of human activities to the loading of PAHs in Antarctica. The concentrations of PAHs in the inland lakes were in the upper part of the PAHs levels in aquatic environments from remote and background regions across the globe. The composition profiles of PAHs indicated that PAHs in the inland lakes were derived mainly from local oil spills, which was corroborated by a large number of fuel spillage reports from ship and plane crash incidents in Antarctica during recent years. Clearly, local human activities, rather than long-range transport, are the dominant sources of PAH contamination to the inland lakes. Finally, the present study demonstrates the efficacy of PE-based passive samplers for investigating PAHs in the aquatic environment of Antarctica under complex field conditions. Copyright © 2016 Elsevier Ltd. All rights reserved.

Lager Yeast Comes of Age

PubMed Central

2014-01-01

Alcoholic fermentations have accompanied human civilizations throughout our history. Lager yeasts have a several-century-long tradition of providing fresh beer with clean taste. The yeast strains used for lager beer fermentation have long been recognized as hybrids between two Saccharomyces species. We summarize the initial findings on this hybrid nature, the genomics/transcriptomics of lager yeasts, and established targets of strain improvements. Next-generation sequencing has provided fast access to yeast genomes. Its use in population genomics has uncovered many more hybridization events within Saccharomyces species, so that lager yeast hybrids are no longer the exception from the rule. These findings have led us to propose network evolution within Saccharomyces species. This “web of life” recognizes the ability of closely related species to exchange DNA and thus drain from a combined gene pool rather than be limited to a gene pool restricted by speciation. Within the domesticated lager yeasts, two groups, the Saaz and Frohberg groups, can be distinguished based on fermentation characteristics. Recent evidence suggests that these groups share an evolutionary history. We thus propose to refer to the Saaz group as Saccharomyces carlsbergensis and to the Frohberg group as Saccharomyces pastorianus based on their distinct genomes. New insight into the hybrid nature of lager yeast will provide novel directions for future strain improvement. PMID:25084862

Lichensphere: a protected natural microhabitat of the non-lichenised fungal communities living in extreme environments of Antarctica.

PubMed

Santiago, Iara F; Soares, Marco Aurélio; Rosa, Carlos A; Rosa, Luiz H

2015-11-01

We surveyed the diversity, distribution and ecology of non-lichenised fungal communities associated with the Antarctic lichens Usnea antarctica and Usnea aurantiaco-atra across Antarctica. The phylogenetic study of the 438 fungi isolates identified 74 taxa from 21 genera of Ascomycota, Basidiomycota and Zygomycota. The most abundant taxa were Pseudogymnoascus sp., Thelebolus sp., Antarctomyces psychrotrophicus and Cryptococcus victoriae, which are considered endemic and/or highly adapted to Antarctica. Thirty-five fungi may represent new and/or endemic species. The fungal communities displayed high diversity, richness and dominance indices; however, the similarity among the communities was variable. After discovering rich and diverse fungal communities composed of symbionts, decomposers, parasites and endemic and cold-adapted cosmopolitan taxa, we introduced the term "lichensphere". We hypothesised that the lichensphere may represent a protected natural microhabitat with favourable conditions able to help non-lichenised fungi and other Antarctic life forms survive and disperse in the extreme environments of Antarctica.

Airborne laser scanning for high-resolution mapping of Antarctica

NASA Astrophysics Data System (ADS)

Csatho, Bea; Schenk, Toni; Krabill, William; Wilson, Terry; Lyons, William; McKenzie, Garry; Hallam, Cheryl; Manizade, Serdar; Paulsen, Timothy

In order to evaluate the potential of airborne laser scanning for topographic mapping in Antarctica and to establish calibration/validation sites for NASA's Ice, Cloud and land Elevation Satellite (ICESat) altimeter mission, NASA, the U.S. National Science Foundation (NSF), and the U.S. Geological Survey (USGS) joined forces to collect high-resolution airborne laser scanning data.In a two-week campaign during the 2001-2002 austral summer, NASA's Airborne Topographic Mapper (ATM) system was used to collect data over several sites in the McMurdo Sound area of Antarctica (Figure 1a). From the recorded signals, NASA computed laser points and The Ohio State University (OSU) completed the elaborate computation/verification of high-resolution Digital Elevation Models (DEMs) in 2003. This article reports about the DEM generation and some exemplary results from scientists using the geomorphologic information from the DEMs during the 2003-2004 field season.

The significance of Antarctica for studies of global geodynamics

USGS Publications Warehouse

Sutherland, R.

2007-01-01

Antarctica has geometric significance for global plate kinematic studies, because it links seafloor spreading systems of the African hemisphere (Indian and Atlantic Oceans) with those of the Pacific. Inferences of plate motions back to 44 Ma, around the onset of rapid spreading south of Australia and formation of a new boundary through New Zealand, are consistent with Antarctic rifting and formation of the Adare Basin during 44-26 Ma (i.e., no additional plate motions are required in the South Pacific). The time period 52-44 Ma represents a profound global and South Pacific tectonic change, and significant details remain unresolved. For 74 Ma a significant nonclosure of the South Pacific plate-motion circuit is identified if Antarctic motion is not included. Alternate inferences of motion through Antarctica during the interval 74-44 Ma imply significantly different subduction volumes and directions around the Pacific, and imply different relative motions between hotspots

Yeast killer systems.

PubMed Central

Magliani, W; Conti, S; Gerloni, M; Bertolotti, D; Polonelli, L

1997-01-01

The killer phenomenon in yeasts has been revealed to be a multicentric model for molecular biologists, virologists, phytopathologists, epidemiologists, industrial and medical microbiologists, mycologists, and pharmacologists. The surprisingly widespread occurrence of the killer phenomenon among taxonomically unrelated microorganisms, including prokaryotic and eukaryotic pathogens, has engendered a new interest in its biological significance as well as its theoretical and practical applications. The search for therapeutic opportunities by using yeast killer systems has conceptually opened new avenues for the prevention and control of life-threatening fungal diseases through the idiotypic network that is apparently exploited by the immune system in the course of natural infections. In this review, the biology, ecology, epidemiology, therapeutics, serology, and idiotypy of yeast killer systems are discussed. PMID:9227858

Chlorinated biphenyls and pesticides in migrating and resident seabirds from East and West Antarctica.

PubMed

Corsolini, Simonetta; Borghesi, Nicoletta; Ademollo, Nicoletta; Focardi, Silvano

2011-11-01

The unhatched eggs of the following seabirds were analyzed to quantify PCBs, hexachlorobenzene (HCB), α-, β-, γ-, δ-hexachlorocyclohexanes (HCHs), o,p' and p,p' isomers of DDT, DDD and DDE: resident Adèlie (Pygoscelis adèliae, ADPE) and Emperor (Aptenodytes forsteri, EMPE) penguins, migrating snow petrel (Pagodroma nivea, SNPT) and South Polar skua (Catharacta maccormicki, SPSK) from the Ross Sea (East Antarctica); and migrating Brown skua (Catharacta antartica, BRSK) and resident ADPE from the Brainsfield Strait (West Antarctica). The general aims were to evaluate the contaminant accumulation in eggs of migrating and resident species in the two study areas, and to compare levels in penguins and skuas nesting in East and West Antarctica. PCB congener and HCH and DDT isomer profiles were also assessed. Comparisons were evaluated using seven PCB congeners (IUPAC nos. 28, 52, 101, 118+149, 138, 153, and 180), p,p'-DDE, ΣDDTs, and ΣHCHs. Higher contaminant concentrations were detected in migrating seabirds (South polar skua and brown skua)>sub-Antarctic species (snow petrel)>Antarctic species (penguins) from both the sampling sites, suggesting contamination events at lower latitudes for those birds migrating northward. HCHs showed the lowest concentrations in all species (from 0.03±0.03 ng/g wet wt in SPSK to 1.81±1.23 ng/g wet wt in ADPE from West Antarctica), and PCBs were the most abundant contaminants (from 4.34±2.15 ng/g wet wt. in EMPE to 53.41±19.61 ng/g wet wt. in brown skua). Among pesticides, it is relevant the detection of p,p'-DDT in Adèlie penguin from West Antarctica and in both species of skua; the detection of this pesticide can confirm its actual use in certain malaria-endemic countries from where it is transferred through the long range transport to the polar regions. Contaminants did not show any significant temporal trend during a ten year time span, from 1994/95 to 2004/05, in organisms collected in East Antarctica and they did not

The impact of lateral variations in lithospheric thickness on glacial isostatic adjustment in West Antarctica

NASA Astrophysics Data System (ADS)

Nield, Grace A.; Whitehouse, Pippa L.; van der Wal, Wouter; Blank, Bas; O'Donnell, John Paul; Stuart, Graham W.

2018-04-01

Differences in predictions of Glacial Isostatic Adjustment (GIA) for Antarctica persist due to uncertainties in deglacial history and Earth rheology. The Earth models adopted in many GIA studies are defined by parameters that vary in the radial direction only and represent a global average Earth structure (referred to as 1D Earth models). Over-simplifying actual Earth structure leads to bias in model predictions in regions where Earth parameters differ significantly from the global average, such as West Antarctica. We investigate the impact of lateral variations in lithospheric thickness on GIA in Antarctica by carrying out two experiments that use different rheological approaches to define 3D Earth models that include spatial variations in lithospheric thickness. The first experiment defines an elastic lithosphere with spatial variations in thickness inferred from seismic studies. We compare the results from this 3D model with results derived from a 1D Earth model that has a uniform lithospheric thickness defined as the average of the 3D lithospheric thickness. Irrespective of deglacial history and sub-lithospheric mantle viscosity, we find higher gradients of present-day uplift rates (i.e. higher amplitude and shorter wavelength) in West Antarctica when using the 3D models, due to the thinner-than-1D-average lithosphere prevalent in this region. The second experiment uses seismically-inferred temperature as input to a power-law rheology thereby allowing the lithosphere to have a viscosity structure. Modelling the lithosphere with a power-law rheology results in behaviour that is equivalent to a thinner-lithosphere model, and it leads to higher amplitude and shorter wavelength deformation compared with the first experiment. We conclude that neglecting spatial variations in lithospheric thickness in GIA models will result in predictions of peak uplift and subsidence that are biased low in West Antarctica. This has important implications for ice-sheet modelling

IPY: Engaging Antarctica: Bringing Antarctic Geoscience to the Public Through a NOVA Documentary and an Innovative Flexible Exhibit for Informal Science Education Venues

NASA Astrophysics Data System (ADS)

Rack, F.; Diamond, J.; Levy, R.; Berg, M.; Dahlman, L.; Jackson, J.

2006-12-01

IPY: Engaging Antarctica is an informal science education project designed to increase the general public's understanding of scientific research conducted in Antarctica. The project focuses specifically on the multi- national, NSF-funded Antarctic Drilling Project (ANDRILL). The ANDRILL project is the newest geological drilling program in an ongoing effort to recover stratigraphic records from Antarctica. ANDRILL's primary objectives are to investigate Antarctica's role in global environmental change over the past 65 million years and to better understand its future response to global changes. Additionally, through ANDRILL's Research Immersion for Science Educators program (ARISE), 12 science educators from four countries will work on science research teams in Antarctica and produce educational materials that feature Antarctic geoscience. The Engaging Antarctica project will produce both a NOVA television documentary and an innovative informal learning exhibit. The documentary, Antarctica's Icy Secrets, will provide a geological perspective on how Antarctica continues to play a major role in affecting global climate by altering ocean currents and sea levels. The learning exhibit, one that blends standards- and inquiry-based learning with the latest information technologies, is coined the Flexhibit. The Engaging Antarctica Flexhibit will provide a digital package of high resolution images for banners as well as learning activities and ideas for exhibit stations that can be implemented by youth groups. Flexhibit images will feature ANDRILL scientists at work, and audio files, available as podcasts, will tell scientists' stories in their own words, speaking directly to the public about the joys and challenges of Antarctic geological research.

Historic First Landing of NASA's P-3B in Antarctica

NASA Image and Video Library

2014-01-03

NASA's first ever historic P-3B landing in McMurdo Station, Antarctica on the sea ice runway, which occurred on Nov. 16, 2013. It took the craft 5 days to reach Antarctica from the NASA Wallops Flight Facility in Wallops Island, Virginia. You can see the IceBridge Team waiting to greet the flight crew as they taxied for the very first time right up to the IceBridge team tents. Credit: NASA/Justin Miller/Indiana University NASA image use policy. NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Like us on Facebook Find us on Instagram

ICE-VOLC Project: unravelling the dynamics of Antarctica volcanoes

NASA Astrophysics Data System (ADS)

Cannata, Andrea; Del Carlo, Paola; Giudice, Gaetano; Giuffrida, Giovanni; Larocca, Graziano; Liuzzo, Marco

2017-04-01

Melbourne and Rittmann volcanoes are located in the Victoria Land. Whilst Rittmann's last eruption dates probably to Pleistocene, Melbourne's most recent eruption between 1862 and 1922, testifying it is still active. At present, both volcanoes display fumarolic activity. Melbourne was discovered in 1841 by James Clark Ross, Rittmann during the 4th Italian Expedition (1988/1989). Our knowledge on both volcanoes is really little. The position of these volcanoes in the Antarctic region (characterised by absence of anthropic noise) and its proximity with the Italian Mario Zucchelli Station makes them ideal sites for studying volcano seismic sources, geothermal emissions, seismo-acoustic signals caused by cryosphere-hydrosphere-atmosphere dynamics, and volcanic gas impact on environment. Hence, the main aim of the ICE-VOLC ("multiparametrIC Experiment at antarctica VOLCanoes: data from volcano and cryosphere-ocean-atmosphere dynamics") project is the study of Melbourne and Rittmann, by acquisition, analysis and integration of multiparametric geophysical, geochemical and thermal data. Complementary objectives include investigation of the relationship between seismo-acoustic activity recorded in Antarctica and cryosphere-hydrosphere-atmosphere dynamics, evaluation of the impact of volcanic gas in atmosphere. This project involves 26 researchers, technologists and technicians from University of Perugia and from Istituto Nazionale di Geofisica e Vulcanologia of Catania, Palermo, Pisa and Rome. In this work, we show the preliminary results obtained after the first expedition in Antarctica, aiming to perform geochemical-thermal surveys in the volcano ice caves, as well as to collect ash samples and to install temporary seismic stations.

Reconstruction of the East Africa and Antarctica continental margins

NASA Astrophysics Data System (ADS)

Nguyen, Luan C.; Hall, Stuart A.; Bird, Dale E.; Ball, Philip J.

2016-06-01

The Early Jurassic separation of Antarctica from Africa plays an important role in our understanding of the dispersal of Gondwana and Pangea. Previous reconstruction models contain overlaps and gaps in the restored margins that reflect difficulties in accurately delineating the continent-ocean-boundary (COB) and determining the amount and distribution of extended continental crust. This study focuses on the evolution of the African margin adjacent to the Mozambique Basin and the conjugate Antarctic margin near the Riiser-Larsen Sea. Satellite-derived gravity data have been used to trace the orientations and landward limits of fracture zones. A 3-D gravity inversion has produced a crustal thickness model that reliably quantifies the extent and amount of stretched crust. Crustal thicknesses together with fracture zone terminations reveal COBs that are significantly closer to the African and Antarctic coasts than previously recognized. Correlation of fracture zone azimuths and identified COBs suggests Antarctica began drifting away from Africa at approximately 171 Ma in a roughly SSE direction. An areal-balancing method has been used to restore the crust to a uniform prerift thickness so as to perform a nonrigid reconstruction for both nonvolcanic and volcanic margins. Both margins reveal a trend of increasing extension from east to west. Our results suggest Africa underwent extension of 60-120 km, while Antarctic crust was stretched by 105-180 km. Various models tested to determine the direction of extension during rifting suggest that Antarctica moved away from Africa in a WNW-ESE direction during the period between 184 and 171 Ma prior to the onset of seafloor spreading.

Yeasts as distinct life forms of fungi

USDA-ARS?s Scientific Manuscript database

This review describes all presently recognized genera of the Ascomycete yeasts (Saccharomycotina, budding yeasts, and the Taphrinomycotina, fission yeasts and related) as well as all currently recognized genera of the Basidiomycete yeasts. This update will be the lead chapter for a book entitled “Ye...

Study of amyloids using yeast

PubMed Central

Wickner, Reed B.; Kryndushkin, Dmitry; Shewmaker, Frank; McGlinchey, Ryan; Edskes, Herman K.

2012-01-01

Summary Saccharomyces cerevisiae has been a useful model organism in such fields as the cell cycle, regulation of transcription, protein trafficking and cell biology, primarily because of its ease of genetic manipulation. This is no less so in the area of amyloid studies. The endogenous yeast amyloids described to date include prions, infectious proteins (Table 1), and some cell wall proteins (1). and amyloids of humans and a fungal prion have also been studied using the yeast system. Accordingly, the emphasis of this chapter will be on genetic, biochemical, cell biological and physical methods particularly useful in the study of yeast prions and other amyloids studied in yeast. We limit our description of these methods to those aspects which have been most useful in studying yeast prions, citing more detailed expositions in the literature. Volumes on yeast genetics methods (2–4), and on amyloids and prions (5, 6) are useful, and Masison has edited a volume of Methods on “Identification, analysis and characterization of fungal prions” which covers some of this territory (7). We also outline some useful physical methods, pointing the reader to more extensive and authoratative descriptions. PMID:22528100

Deglacial temperature history of West Antarctica.

PubMed

Cuffey, Kurt M; Clow, Gary D; Steig, Eric J; Buizert, Christo; Fudge, T J; Koutnik, Michelle; Waddington, Edwin D; Alley, Richard B; Severinghaus, Jeffrey P

2016-12-13

The most recent glacial to interglacial transition constitutes a remarkable natural experiment for learning how Earth's climate responds to various forcings, including a rise in atmospheric CO 2 This transition has left a direct thermal remnant in the polar ice sheets, where the exceptional purity and continual accumulation of ice permit analyses not possible in other settings. For Antarctica, the deglacial warming has previously been constrained only by the water isotopic composition in ice cores, without an absolute thermometric assessment of the isotopes' sensitivity to temperature. To overcome this limitation, we measured temperatures in a deep borehole and analyzed them together with ice-core data to reconstruct the surface temperature history of West Antarctica. The deglacial warming was [Formula: see text]C, approximately two to three times the global average, in agreement with theoretical expectations for Antarctic amplification of planetary temperature changes. Consistent with evidence from glacier retreat in Southern Hemisphere mountain ranges, the Antarctic warming was mostly completed by 15 kyBP, several millennia earlier than in the Northern Hemisphere. These results constrain the role of variable oceanic heat transport between hemispheres during deglaciation and quantitatively bound the direct influence of global climate forcings on Antarctic temperature. Although climate models perform well on average in this context, some recent syntheses of deglacial climate history have underestimated Antarctic warming and the models with lowest sensitivity can be discounted.

Receiver functions from west Antarctica; crust and mantle properties from POLENET

NASA Astrophysics Data System (ADS)

Aster, R. C.; Chaput, J. A.; Hansen, S. E.; Nyblade, A.; Wiens, D. A.; Huerta, A. D.; Wilson, T. J.; Anandakrishnan, S.

2011-12-01

We use receiver functions to extract crustal thickness and mantle transition zone depths across a wide extent of West Antarctica and the Transantarctic mountains using POLENET data, including recently recovered data from a 14-station West Antarctic Rift Zone transect. An adaptive approach for generating and analyzing P-receiver functions over ice sheets and sedimentary basins (similar to Winberry and Anandakrishnan, 2004) is applied using an extended time multitaper deconvolution algorithm and forward modeling synthetic seismogram fitting. We model P-S receiver functions via a layer stripping methodology (beginning with the ice sheet, if present), and fit increasingly longer sections of synthetic receiver functions to model the multiples observed in the data derived receiver functions. We additionally calculate S-P receiver functions, which provide complementary structural constraints, to generate consistent common conversion point stacks to image crustal and upper mantle discontinuities under West Antarctica. Crust throughout West Antarctica is generally thin (23-29 km; comparable to the U.S. Basin and Range) with relative thickening under the Marie Byrd Land volcanic province (to 32 km) and the Transantarctic Mountains. All constrained west Antarctic crust is substantially thicker than that in the vicinity of Ross Island, where crust as thin as 17 km is inferred in the Terror Rift region.

Pseudonotohymena antarctica n. g., n. sp. (Ciliophora, Hypotricha), a New Species from Antarctic Soil.

PubMed

Park, Kyung-Min; Jung, Jae-Ho; Min, Gi-Sik; Kim, Sanghee

2017-07-01

A new soil ciliate, Pseudonotohymena antarctica n. g., n. sp., from King George Island, Antarctica, is described based on live observation, protargol impregnation, and its 18S rRNA gene. The new genus Pseudonotohymena is morphologically similar to the genus Notohymena Blatterer and Foissner in the following characteristics: 18 fronto-ventral-transverse cirri, a flexible body, undulating membranes, dorsomarginal kineties, and the number of cirri in the marginal rows. However, Pseudonotohymena differs from Notohymena particularly in the dorsal ciliature, that is, in possessing a nonfragmented dorsal kinety (vs. fragmented). In addition, the molecular phylogenetic relationship of the new species differs from that of Notohymena species. On the basis of the morphological features, the genetic data, and morphogenesis, we establish P. antarctica n. g., n. sp. In addition, the cyst morphology of this species is described. © 2016 The Author(s) Journal of Eukaryotic Microbiology © 2016 International Society of Protistologists.

Modern benthic ostracodes from Lutzow-Holm Bay, East Antarctica: paleoceanographic, paleobiogeographic, and evolutionary significance

USGS Publications Warehouse

Yasuhara, Moriaki; Kato, Masako; Ikeya, Noriyuki; Seto, Koji

2007-01-01

Seventy-three ostracode species from 38 genera were recovered from the 55 surface sediment samples in Lützow-Holm Bay, northeastern Antarctica. We investigated bathymetric and geographic distributions of modern benthic ostracode species in the bay and compared this fauna with published modern and fossil ostracode data of Antarctic and southern South American regions. The results show: (1) Four biotopes and three sub-biotopes are recognized based on Q-mode cluster analysis, which suggest distributions of modern ostracodes are mainly controlled by water-mass structure, ice scouring, and light availability. (2) Comparison between the Lützow-Holm Bay fauna and other ostracode faunas from Antarctica and southern South America shows high endemism and homogeneity of Antarctic ostracode fauna, suggesting in situ evolution of most extant Antarctic species. (3) Most species are endemic to the Antarctica, a few species also inhabit South American waters.

Evolutionary History of Ascomyceteous Yeasts

DOE Office of Scientific and Technical Information (OSTI.GOV)

Haridas, Sajeet; Riley, Robert; Salamov, Asaf

2014-06-06

Yeasts are important for many industrial and biotechnological processes and show remarkable diversity despite morphological similarities. We have sequenced the genomes of 16 ascomycete yeasts of taxonomic and industrial importance including members of Saccharomycotina and Taphrinomycotina. A comparison of these with several other previously published yeast genomes have added increased confidence to the phylogenetic positions of previously poorly placed species including Saitoella complicata, Babjeviella inositovora and Metschnikowia bicuspidata. Phylogenetic analysis also showed that yeasts with alternative nuclear codon usage where CUG encodes serine instead of leucine are monophyletic within the Saccharomycotina. Most of the yeasts have compact genomes with amore » large fraction of single exon genes with Lipomyces starkeyi and the previously published Pneumocystis jirovecii being notable exceptions. Intron analysis suggests that early diverging species have more introns. We also observed a large number of unclassified lineage specific non-simple repeats in these genomes.« less

Eighteen new oleaginous yeast species.

PubMed

Garay, Luis A; Sitepu, Irnayuli R; Cajka, Tomas; Chandra, Idelia; Shi, Sandy; Lin, Ting; German, J Bruce; Fiehn, Oliver; Boundy-Mills, Kyria L

2016-07-01

Of 1600 known species of yeasts, about 70 are known to be oleaginous, defined as being able to accumulate over 20 % intracellular lipids. These yeasts have value for fundamental and applied research. A survey of yeasts from the Phaff Yeast Culture Collection, University of California Davis was performed to identify additional oleaginous species within the Basidiomycota phylum. Fifty-nine strains belonging to 34 species were grown in lipid inducing media, and total cell mass, lipid yield and triacylglycerol profiles were determined. Thirty-two species accumulated at least 20 % lipid and 25 species accumulated over 40 % lipid by dry weight. Eighteen of these species were not previously reported to be oleaginous. Triacylglycerol profiles were suitable for biodiesel production. These results greatly expand the number of known oleaginous yeast species, and reveal the wealth of natural diversity of triacylglycerol profiles within wild-type oleaginous Basidiomycetes.

Glacial isostatic crustal uplift in southern Victoria Land, Antarctica, from geologic and geodetic records

NASA Astrophysics Data System (ADS)

Konfal, S.; Wilson, T.; Bevis, M. G.; Kendrick, E. C.; Hall, B. L.

2011-12-01

Geologic records and geodetic measurements of glacial isostatic crustal motions are presented from the southern Victoria Land region of Antarctica. In much of the world, key records used for mapping and modeling glacial isostatic crustal motions come from raised paleoshorelines and beaches of ice-marginal lakes and seas. While such records are scarce in Antarctica, preserved paleoshorelines are present in the southern Victoria Land region of Antarctica. Light detection and ranging (LiDAR) data coverages of these features were acquired during the 2001-2002 austral summer field season by NASA's Airborne Topographic Mapper (ATM) system, resulting in 2 meter horizontal resolution digital elevation models (DEMs). This study utilizes these DEM data to derive crustal tilt values from observed changes in elevation along the length of the shorelines. Radiocarbon age data are correlated with the associated degree of shoreline tilt to derive a rate of crustal deformation since deglaciation. Modern rates of glacial isostatic crustal motion are derived from GPS stations in the same region. Campaign station occupation began in 1996-1997 under the TAMDEF (Transantarctic Mountain DEFormation Network) project, and continuous GPS data collected began in 1999 and continues under the ANET/POLENET (Antarctica Polar Earth Observing Network) project, enabling analysis of decadal scale time series. Integrated gradient curves from paleoshoreline records and GPS crustal velocities show exponential form and indicate tilting down to the east. Eastward tilt may be the result of substantial loss of East Antarctic ice, a collapsing forebulge linked to ice centers in the Ross Sea region or in interior West Antarctica, or differences in earth response due to laterally varying earth structure. Modeling of these new data, along with comparison of tilt directions to centers of ice mass loss, provide tests of these scenarios and yield new insights into earth models and ice history.

Ice-shelf melting around Antarctica

NASA Astrophysics Data System (ADS)

Rignot, E.; Jacobs, S.

2008-12-01

The traditional view on the mass balance of Antarctic ice shelves is that they loose mass principally from iceberg calving with bottom melting a much lower contributing factor. Because ice shelves are now known to play a fundamental role in ice sheet evolution, it is important to re-evaluate their wastage processes from a circumpolar perspective using a combination of remote sensing techniques. We present area average rates deduced from grounding line discharge, snow accumulation, firn depth correction and ice shelf topography. We find that ice shelf melting accounts for roughly half of ice-shelf ablation, with a total melt water production of 1027 Gt/yr. The attrition fraction due to in-situ melting varies from 9 to 90 percent around Antarctica. High melt producers include the Ronne, Ross, Getz, Totten, Amery, George VI, Pine Island, Abbot, Dotson/Crosson, Shackleton, Thwaites and Moscow University Ice Shelves. Low producers include the Larsen C, Princess Astrid and Ragnhild coast, Fimbul, Brunt and Filchner. Correlation between melt water production and grounding line discharge is low (R2 = 0.65). Correlation with thermal ocean forcing from the ocean are highest in the northern parts of West Antarctica where regressions yield R2 of 0.93-0.97. Melt rates in the Amundsen Sea exhibit a quadratic sensitivity to thermal ocean forcing. We conclude that ice shelf melting plays a dominant role in ice shelf mass balance, with a potential to change rapidly in response to altered ocean heat transport onto the Antarctic continental shelf.

Antarctica: Arena for South American Cooperation or Conflict.

ERIC Educational Resources Information Center

Child, Jack

A number of converging circumstances suggest that Antarctica may be a major object of geopolitical attention in South America in the decade to come. The Malvinas/Falklands crisis focused geopolitical attention on the South Atlantic and the chain of Southern (Austral) Islands which link the southern tip of South America to the Antarctic Peninsula.…

Antarctica as a testing ground for manned missions to the Moon and Mars

NASA Astrophysics Data System (ADS)

Demidov, N. E.; Lukin, V. V.

2017-03-01

This paper is concerned with the study of expedition activity in Antarctica as a part of the search for useful analogies and solutions which can be taken into account in planning manned missions to the Moon and Mars. The following is considered: natural analogies, human factors, station facilities, means of transportation, scientific programs, safety issues, and historical and political analogies. A rationalization is given for the idea of creating a testing ground in Antarctica (stations Vostok, Novolazarevskaya, Jetty Oasis) for ground-based simulation of functioning of a lunar and Martian base.

Cretaceous reconstructions of East Antarctica, Africa and Madagascar

NASA Astrophysics Data System (ADS)

Marks, K. M.; Tikku, A. A.

2001-04-01

Some Cretaceous reconstructions of East Antarctica, Africa, and Madagascar overlap the Mozambique ridge onto the margin of Dronning Maud Land, and others place Madagascar west of the Gunnerus ridge, into the Riiser-Larsen Sea. Our M10Ny (131.9 Ma), M0 (120.4 Ma), 96 Ma, and 34y (83 Ma) marine free-air gravity and topography reconstructions illustrate a solution to the overlap problem and also demonstrate that Madagascar separated from Antarctica east of the Gunnerus ridge. Our reconstructions chronicle the growth of the conjugate Mozambique and Riiser-Larsen Basins created at the Southwest Indian spreading ridge. Well defined spreading corridors, identified by conjugate fracture zones and Mesozoic magnetic anomaly identifications, extend from one basin into the other. We find that the eastern scarp of the Mozambique ridge aligns with the Astrid ridge, and there is no room for Madagascar west of the Gunnerus ridge. The overlap of the Mozambique ridge is solved by taking into account the motion of an independent Mozambique ridge microplate that existed from Chron M11 to circa M2.

Concordia CCD - A Geoscope station in continental Antarctica

NASA Astrophysics Data System (ADS)

Maggi, A.; Lévêque, J.; Thoré, J.; Bes de Berc, M.; Bernard, A.; Danesi, S.; Morelli, A.; Delladio, A.; Sorrentino, D.; Stutzmann, E.; Geoscope Team

2010-12-01

Concordia (Dome C, Antarctica) has had a permanent seismic station since 2005. It is run by EOST and INGV in collaboration with the French and Italian polar institutes (IPEV and PNRA). It is installed in an ice-vault, at 12m depth, distant 1km from the permanent scientific base at Concordia. The temperature in the vault is a constant -55°C. The data quality at the station has improved continuously since its installation. In 2007, the station was declared at ISC as an open station with station code CCD (ConCorDia), with data available upon request. It is only the second permanent station in the Antarctic continent, after South Pole. In 2010, CCD was included in the Geoscope network. Data from CCD starting in 2007 are now freely available from the Geoscope Data Center and IRIS. We present an analysis of the data quality at CCD, and describe the technical difficulties of operating an observatory-quality seismic station in the extreme environmental conditons present in continental Antarctica.

ECC (Electrochemical Concentration Cell) ozonesonde observations at Mirny, Antarctica, during 1988

NASA Technical Reports Server (NTRS)

Komhyr, W. D.; Lathrop, J. A.; Arbuzova, V. N.; Khattatov, V. U.; Nureyev, P. G.; Rudakov, V. V.; Zamyshlayev, I. V.

1989-01-01

Atmospheric ozone vertical distributions, air temperatures, and wind speed and direction data are presented for 40 balloon electrochemical concentration cell ozone soundings made at Mirny, Antarctica, in 1988.

Blowing Snow Sublimation and Transport over Antarctica from 11 Years of CALIPSO Observations

NASA Technical Reports Server (NTRS)

Palm, Stephen P.; Kayetha, Vinay; Yang, Yuekui; Pauly, Rebecca

2017-01-01

Blowing snow processes commonly occur over the earth's ice sheets when the 10 mile wind speed exceeds a threshold value. These processes play a key role in the sublimation and redistribution of snow thereby influencing the surface mass balance. Prior field studies and modeling results have shown the importance of blowing snow sublimation and transport on the surface mass budget and hydrological cycle of high-latitude regions. For the first time, we present continent-wide estimates of blowing snow sublimation and transport over Antarctica for the period 2006-2016 based on direct observation of blowing snow events. We use an improved version of the blowing snow detection algorithm developed for previous work that uses atmospheric backscatter measurements obtained from the CALIOP (Cloud-Aerosol Lidar with Orthogonal Polarization) lidar aboard the CALIPSO (Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation) satellite. The blowing snow events identified by CALIPSO and meteorological fields from MERRA-2 are used to compute the blowing snow sublimation and transport rates. Our results show that maximum sublimation occurs along and slightly inland of the coastline. This is contrary to the observed maximum blowing snow frequency which occurs over the interior. The associated temperature and moisture reanalysis fields likely contribute to the spatial distribution of the maximum sublimation values. However, the spatial pattern of the sublimation rate over Antarctica is consistent with modeling studies and precipitation estimates. Overall, our results show that the 2006-2016 Antarctica average integrated blowing snow sublimation is about 393 +/- 196 Gt yr(exp -1), which is considerably larger than previous model-derived estimates. We find maximum blowing snow transport amount of 5 Mt km-1 yr(exp -1) over parts of East Antarctica and estimate that the average snow transport from continent to ocean is about 3.7 Gt yr(exp -1). These continent-wide estimates are the

Oral yeast colonization throughout pregnancy

PubMed Central

Rio, Rute; Simões-Silva, Liliana; Garro, Sofia; Silva, Mário-Jorge; Azevedo, Álvaro

2017-01-01

Background Recent studies suggest that placenta may harbour a unique microbiome that may have origin in maternal oral microbiome. Although the major physiological and hormonal adjustments observed in pregnant women lead to biochemical and microbiological modifications of the oral environment, very few studies evaluated the changes suffered by the oral microbiota throughout pregnancy. So, the aim of our study was to evaluate oral yeast colonization throughout pregnancy and to compare it with non-pregnant women. Material and Methods The oral yeast colonization was assessed in saliva of 30 pregnant and non-pregnant women longitudinally over a 6-months period. Demographic information was collected, a non-invasive intra-oral examination was performed and saliva flow and pH were determined. Results Pregnant and non-pregnant groups were similar regarding age and level of education. Saliva flow rate did not differ, but saliva pH was lower in pregnant than in non-pregnant women. Oral yeast prevalence was higher in pregnant than in non-pregnant women, either in the first or in the third trimester, but did not attain statistical significance. In individuals colonized with yeast, the total yeast quantification (Log10CFU/mL) increase from the 1st to the 3rd trimester in pregnant women, but not in non-pregnant women. Conclusions Pregnancy may favour oral yeast growth that may be associated with an acidic oral environment. Key words:Oral yeast, fungi, pregnancy, saliva pH. PMID:28160578

Biomedical applications of yeast- a patent view, part one: yeasts as workhorses for the production of therapeutics and vaccines.

PubMed

Roohvand, Farzin; Shokri, Mehdi; Abdollahpour-Alitappeh, Meghdad; Ehsani, Parastoo

2017-08-01

Yeasts, as Eukaryotes, offer unique features for ease of growth and genetic manipulation possibilities, making it an exceptional microbial host. Areas covered: This review provides general and patent-oriented insights into production of biopharmaceuticals by yeasts. Patents, wherever possible, were correlated to the original or review articles. The review describes applications of major GRAS (generally regarded as safe) yeasts for the production of therapeutic proteins and subunit vaccines; additionally, immunomodulatory properties of yeast cell wall components were reviewed for use of whole yeast cells as a new vaccine platform. The second part of the review will discuss yeast- humanization strategies and innovative applications. Expert opinion: Biomedical applications of yeasts were initiated by utilization of Saccharomyces cerevisiae, for production of leavened (fermented) products, and advanced to serve to produce biopharmaceuticals. Higher biomass production and expression/secretion yields, more similarity of glycosylation patterns to mammals and possibility of host-improvement strategies through application of synthetic biology might enhance selection of Pichia pastoris (instead of S. cerevisiae) as a host for production of biopharmaceutical in future. Immunomodulatory properties of yeast cell wall β-glucans and possibility of intracellular expression of heterologous pathogen/tumor antigens in yeast cells have expanded their application as a new platform, 'Whole Yeast Vaccines'.

Nutrient supplements boost yeast transformation efficiency

PubMed Central

Yu, Sheng-Chun; Dawson, Alexander; Henderson, Alyssa C.; Lockyer, Eloise J.; Read, Emily; Sritharan, Gayathri; Ryan, Marjah; Sgroi, Mara; Ngou, Pok M.; Woodruff, Rosie; Zhang, Ruifeng; Ren Teen Chia, Travis; Liu, Yu; Xiang, Yiyu; Spanu, Pietro D.

2016-01-01

Efficiency of yeast transformation is determined by the rate of yeast endocytosis. The aim of this study was to investigate the effect of introducing amino acids and other nutrients (inositol, adenine, or p-aminobenzoic acid) in the transformation medium to develop a highly efficient yeast transformation protocol. The target of rapamycin complex 1 (TORC1) kinase signalling complex influences the rate of yeast endocytosis. TORC signaling is induced by amino acids in the media. Here, we found that increasing the concentration of amino acids and other nutrients in the growth media lead to an increase yeast transformation efficiency up to 107 CFU per μg plasmid DNA and per 108 cells with a 13.8 kb plasmid DNA. This is over 130 times that of current published methods. This improvement may facilitate more efficient experimentation in which transformation efficiency is critical, such as yeast two-hybrid screening. PMID:27760994

Virgin olive oil yeasts: A review.

PubMed

Ciafardini, Gino; Zullo, Biagi Angelo

2018-04-01

This review summarizes current knowledge on virgin olive oil yeasts. Newly produced olive oil contains solid particles and micro drops of vegetation water in which yeasts reproduce to become the typical microbiota of olive oil. To date, about seventeen yeast species have been isolated from different types of olive oils and their by-products, of which six species have been identified as new species. Certain yeast species contribute greatly to improving the sensorial characteristics of the newly produced olive oil, whereas other species are considered harmful as they can damage the oil quality through the production of unpleasant flavors and triacylglycerol hydrolysis. Studies carried out in certain yeast strains have demonstrated the presence of defects in olive oil treated with Candida adriatica, Nakazawaea wickerhamii and Candida diddensiae specific strains, while other olive oil samples treated with other Candida diddensiae strains were defect-free after four months of storage and categorized as extra virgin. A new acetic acid producing yeast species, namely, Brettanomyces acidodurans sp. nov., which was recently isolated from olive oil, could be implicated in the wine-vinegary defect of the product. Other aspects related to the activity of the lipase-producing yeasts and the survival of the yeast species in the flavored olive oils are also discussed. Copyright © 2017 Elsevier Ltd. All rights reserved.

21 CFR 184.1983 - Bakers yeast extract.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 21 Food and Drugs 3 2014-04-01 2014-04-01 false Bakers yeast extract. 184.1983 Section 184.1983... GRAS § 184.1983 Bakers yeast extract. (a) Bakers yeast extract is the food ingredient resulting from concentration of the solubles of mechanically ruptured cells of a selected strain of yeast, Saccharomyces...

21 CFR 184.1983 - Bakers yeast extract.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 21 Food and Drugs 3 2013-04-01 2013-04-01 false Bakers yeast extract. 184.1983 Section 184.1983... Listing of Specific Substances Affirmed as GRAS § 184.1983 Bakers yeast extract. (a) Bakers yeast extract... a selected strain of yeast, Saccharomyces cerevisiae. It may be concentrated or dried. (b) The...

21 CFR 184.1983 - Bakers yeast extract.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 21 Food and Drugs 3 2012-04-01 2012-04-01 false Bakers yeast extract. 184.1983 Section 184.1983... Listing of Specific Substances Affirmed as GRAS § 184.1983 Bakers yeast extract. (a) Bakers yeast extract... a selected strain of yeast, Saccharomyces cerevisiae. It may be concentrated or dried. (b) The...

New Perspectives on Blowing Snow Transport, Sublimation, and Layer Thermodynamic Structure over Antarctica

NASA Technical Reports Server (NTRS)

Palm, Steve; Kayetha, Vinay; Yang, Yuekui; Pauly, Rebecca M.

2017-01-01

Blowing snow over Antarctica is a widespread and frequent event. Satellite remote sensing using lidar has shown that blowing snow occurs over 70% of the time over large areas of Antarctica in winter. The transport and sublimation of blowing snow are important terms in the ice sheet mass balance equation and the latter is also an important part of the hydrological cycle. Until now the only way to estimate the magnitude of these processes was through model parameterization. We present a technique that uses direct satellite observations of blowing snow and model (MERRA-2) temperature and humidity fields to compute both transport and sublimation of blowing snow over Antarctica for the period 2006 to 2016. The results show a larger annual continent-wide integrated sublimation than current published estimates and a significant transport of snow from continent to ocean. The talk will also include the lidar backscatter structure of blowing snow layers that often reach heights of 200 to 300 m as well as the first dropsonde measurements of temperature, moisture and wind through blowing snow layers.

History of genome editing in yeast.

PubMed

Fraczek, Marcin G; Naseeb, Samina; Delneri, Daniela

2018-05-01

For thousands of years humans have used the budding yeast Saccharomyces cerevisiae for the production of bread and alcohol; however, in the last 30-40 years our understanding of the yeast biology has dramatically increased, enabling us to modify its genome. Although S. cerevisiae has been the main focus of many research groups, other non-conventional yeasts have also been studied and exploited for biotechnological purposes. Our experiments and knowledge have evolved from recombination to high-throughput PCR-based transformations to highly accurate CRISPR methods in order to alter yeast traits for either research or industrial purposes. Since the release of the genome sequence of S. cerevisiae in 1996, the precise and targeted genome editing has increased significantly. In this 'Budding topic' we discuss the significant developments of genome editing in yeast, mainly focusing on Cre-loxP mediated recombination, delitto perfetto and CRISPR/Cas. © 2018 The Authors. Yeast published by John Wiley & Sons, Ltd.

Inventions on baker's yeast strains and specialty ingredients.

PubMed

Gélinas, Pierre

2009-06-01

Baker's yeast is one of the oldest food microbial starters. Between 1927 and 2008, 165 inventions on more than 337 baker's yeast strains were patented. The first generation of patented yeast strains claimed improved biomass yield at the yeast plant, higher gassing power in dough or better survival to drying to prepare active dry baker's yeast. Especially between 1980 and 1995, a major interest was given to strains for multiple bakery applications such as dough with variable sugar content and stored at refrigeration (cold) or freezing temperatures. During the same period, genetically engineered yeast strains became very popular but did not find applications in the baking industry. Since year 2000, patented baker's yeast strains claimed aroma, anti-moulding or nutritive properties to better meet the needs of the baking industry. In addition to patents on yeast strains, 47 patents were issued on baker's yeast specialty ingredients for niche markets. This review shows that patents on baker's yeast with improved characteristics such as aromatic or nutritive properties have regularly been issued since the 1920's. Overall, it also confirms recent interest for a very wide range of tailored-made yeast-based ingredients for bakery applications.

21 CFR 172.898 - Bakers yeast glycan.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 21 Food and Drugs 3 2012-04-01 2012-04-01 false Bakers yeast glycan. 172.898 Section 172.898 Food... Multipurpose Additives § 172.898 Bakers yeast glycan. Bakers yeast glycan may be safely used in food in accordance with the following conditions: (a) Bakers yeast glycan is the comminuted, washed, pasteurized, and...

21 CFR 172.898 - Bakers yeast glycan.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 21 Food and Drugs 3 2013-04-01 2013-04-01 false Bakers yeast glycan. 172.898 Section 172.898 Food... Multipurpose Additives § 172.898 Bakers yeast glycan. Bakers yeast glycan may be safely used in food in accordance with the following conditions: (a) Bakers yeast glycan is the comminuted, washed, pasteurized, and...

The wine and beer yeast Dekkera bruxellensis

PubMed Central

Schifferdecker, Anna Judith; Dashko, Sofia; Ishchuk, Olena P; Piškur, Jure

2014-01-01

Recently, the non-conventional yeast Dekkera bruxellensis has been gaining more and more attention in the food industry and academic research. This yeast species is a distant relative of Saccharomyces cerevisiae and is especially known for two important characteristics: on the one hand, it is considered to be one of the main spoilage organisms in the wine and bioethanol industry; on the other hand, it is 'indispensable' as a contributor to the flavour profile of Belgium lambic and gueuze beers. Additionally, it adds to the characteristic aromatic properties of some red wines. Recently this yeast has also become a model for the study of yeast evolution. In this review we focus on the recently developed molecular and genetic tools, such as complete genome sequencing and transformation, to study and manipulate this yeast. We also focus on the areas that are particularly well explored in this yeast, such as the synthesis of off-flavours, yeast detection methods, carbon metabolism and evolutionary history. © 2014 The Authors. Yeast published by John Wiley & Sons, Ltd. PMID:24932634

The wine and beer yeast Dekkera bruxellensis.

PubMed

Schifferdecker, Anna Judith; Dashko, Sofia; Ishchuk, Olena P; Piškur, Jure

2014-09-01

Recently, the non-conventional yeast Dekkera bruxellensis has been gaining more and more attention in the food industry and academic research. This yeast species is a distant relative of Saccharomyces cerevisiae and is especially known for two important characteristics: on the one hand, it is considered to be one of the main spoilage organisms in the wine and bioethanol industry; on the other hand, it is 'indispensable' as a contributor to the flavour profile of Belgium lambic and gueuze beers. Additionally, it adds to the characteristic aromatic properties of some red wines. Recently this yeast has also become a model for the study of yeast evolution. In this review we focus on the recently developed molecular and genetic tools, such as complete genome sequencing and transformation, to study and manipulate this yeast. We also focus on the areas that are particularly well explored in this yeast, such as the synthesis of off-flavours, yeast detection methods, carbon metabolism and evolutionary history. © 2014 The Authors. Yeast published by John Wiley & Sons, Ltd.

Biotechnology of non-Saccharomyces yeasts-the basidiomycetes.

PubMed

Johnson, Eric A

2013-09-01

Yeasts are the major producer of biotechnology products worldwide, exceeding production in capacity and economic revenues of other groups of industrial microorganisms. Yeasts have wide-ranging fundamental and industrial importance in scientific, food, medical, and agricultural disciplines (Fig. 1). Saccharomyces is the most important genus of yeast from fundamental and applied perspectives and has been expansively studied. Non-Saccharomyces yeasts (non-conventional yeasts) including members of the Ascomycetes and Basidiomycetes also have substantial current utility and potential applicability in biotechnology. In an earlier mini-review, "Biotechnology of non-Saccharomyces yeasts-the ascomycetes" (Johnson Appl Microb Biotechnol 97: 503-517, 2013), the extensive biotechnological utility and potential of ascomycetous yeasts are described. Ascomycetous yeasts are particularly important in food and ethanol formation, production of single-cell protein, feeds and fodder, heterologous production of proteins and enzymes, and as model and fundamental organisms for the delineation of genes and their function in mammalian and human metabolism and disease processes. In contrast, the roles of basidiomycetous yeasts in biotechnology have mainly been evaluated only in the past few decades and compared to the ascomycetous yeasts and currently have limited industrial utility. From a biotechnology perspective, the basidiomycetous yeasts are known mainly for the production of enzymes used in pharmaceutical and chemical synthesis, for production of certain classes of primary and secondary metabolites such as terpenoids and carotenoids, for aerobic catabolism of complex carbon sources, and for bioremediation of environmental pollutants and xenotoxicants. Notwithstanding, the basidiomycetous yeasts appear to have considerable potential in biotechnology owing to their catabolic utilities, formation of enzymes acting on recalcitrant substrates, and through the production of unique primary

Between science and industry-applied yeast research.

PubMed

Korhola, Matti

2018-03-01

I was fortunate to enter yeast research at the Alko Research Laboratories with a strong tradition in yeast biochemistry and physiology studies. At the same time in the 1980s there was a fundamental or paradigm change in molecular biology research with discoveries in DNA sequencing and other analytical and physical techniques for studying macromolecules and cells. Since that time biotechnological research has expanded the traditional fermentation industries to efficient production of industrial and other enzymes and specialty chemicals. Our efforts were directed towards improving the industrial production organisms: minerals enriched yeasts (Se, Cr, Zn) and high glutathione content yeast, baker´s, distiller´s, sour dough and wine yeasts, and the fungal Trichoderma reesei platform for enzyme production. I am grateful for the trust of my colleagues in several leadership positions at the Alko Research Laboratories, Yeast Industry Platform and at the international yeast community.

Seismic and thermal structure of the crust and uppermost mantle beneath Antarctica from inversion of multiple seismic datasets

NASA Astrophysics Data System (ADS)

Wiens, D.; Shen, W.; Anandakrishnan, S.; Aster, R. C.; Gerstoft, P.; Bromirski, P. D.; Dalziel, I.; Hansen, S. E.; Heeszel, D.; Huerta, A. D.; Nyblade, A.; Stephen, R. A.; Wilson, T. J.; Winberry, J. P.; Stern, T. A.

2017-12-01

Since the last decade of the 20th century, over 200 broadband seismic stations have been deployed across Antarctica (e.g., temporary networks such as TAMSEIS, AGAP/GAMSEIS, POLENET/ANET, TAMNNET and RIS/DRIS by U.S. geoscientists as well as stations deployed by Japan, Britain, China, Norway, and other countries). In this presentation, we discuss our recent efforts to build reference crustal and uppermost mantle shear velocity (Vs) and thermal models for continental Antarctica based on those seismic arrays. By combing the high resolution Rayleigh wave dispersion maps derived from both ambient noise and teleseismic earthquakes, together with P receiver function waveforms, we develop a 3-D Vs model for the crust and uppermost mantle beneath Central and West Antarctica to a depth of 200 km. Additionally, using this 3-D seismic model to constrain the crustal structure, we re-invert for the upper mantle thermal structure using the surface wave data within a thermodynamic framework and construct a 3-D thermal model for the Antarctic lithosphere. The final product, a high resolution thermal model together with associated uncertainty estimates from the Monte Carlo inversion, allows us to derive lithospheric thickness and surface heat flux maps for much of the continent. West Antarctica shows a much thinner lithosphere ( 50-90 km) than East Antarctica ( 130-230 km), with a sharp transition along the Transantarctic Mountains (TAM). A variety of geological features, including a slower/hotter but highly heterogeneous West Antarctica and a much faster/colder East Antarctic craton, are present in the 3-D seismic/thermal models. Notably, slow seismic velocities observed in the uppermost mantle beneath the southern TAM are interpreted as a signature of lithospheric foundering and replacement with hot asthenosphere. The high resolution image of these features from the 3-D models helps further investigation of the dynamic state of Antarctica's lithosphere and underlying asthenosphere

Upper mantle structure of central and West Antarctica from array analysis of Rayleigh wave phase velocities

NASA Astrophysics Data System (ADS)

Heeszel, David S.; Wiens, Douglas A.; Anandakrishnan, Sridhar; Aster, Richard C.; Dalziel, Ian W. D.; Huerta, Audrey D.; Nyblade, Andrew A.; Wilson, Terry J.; Winberry, J. Paul

2016-03-01

The seismic velocity structure of Antarctica is important, both as a constraint on the tectonic history of the continent and for understanding solid Earth interactions with the ice sheet. We use Rayleigh wave array analysis methods applied to teleseismic data from recent temporary broadband seismograph deployments to image the upper mantle structure of central and West Antarctica. Phase velocity maps are determined using a two-plane wave tomography method and are inverted for shear velocity using a Monte Carlo approach to estimate three-dimensional velocity structure. Results illuminate the structural dichotomy between the East Antarctic Craton and West Antarctica, with West Antarctica showing thinner crust and slower upper mantle velocity. West Antarctica is characterized by a 70-100 km thick lithosphere, underlain by a low-velocity zone to depths of at least 200 km. The slowest anomalies are beneath Ross Island and the Marie Byrd Land dome and are interpreted as upper mantle thermal anomalies possibly due to mantle plumes. The central Transantarctic Mountains are marked by an uppermost mantle slow-velocity anomaly, suggesting that the topography is thermally supported. The presence of thin, higher-velocity lithosphere to depths of about 70 km beneath the West Antarctic Rift System limits estimates of the regionally averaged heat flow to less than 90 mW/m2. The Ellsworth-Whitmore block is underlain by mantle with velocities that are intermediate between those of the West Antarctic Rift System and the East Antarctic Craton. We interpret this province as Precambrian continental lithosphere that has been altered by Phanerozoic tectonic and magmatic activity.

Yeast-based biosensors: design and applications.

PubMed

Adeniran, Adebola; Sherer, Michael; Tyo, Keith E J

2015-02-01

Yeast-based biosensing (YBB) is an exciting research area, as many studies have demonstrated the use of yeasts to accurately detect specific molecules. Biosensors incorporating various yeasts have been reported to detect an incredibly large range of molecules including but not limited to odorants, metals, intracellular metabolites, carcinogens, lactate, alcohols, and sugars. We review the detection strategies available for different types of analytes, as well as the wide range of output methods that have been incorporated with yeast biosensors. We group biosensors into two categories: those that are dependent upon transcription of a gene to report the detection of a desired molecule and those that are independent of this reporting mechanism. Transcription-dependent biosensors frequently depend on heterologous expression of sensing elements from non-yeast organisms, a strategy that has greatly expanded the range of molecules available for detection by YBBs. Transcription-independent biosensors circumvent the problem of sensing difficult-to-detect analytes by instead relying on yeast metabolism to generate easily detected molecules when the analyte is present. The use of yeast as the sensing element in biosensors has proven to be successful and continues to hold great promise for a variety of applications. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permission@oup.com.

Preliminary microphysical characterization of precipitation at ground over Antarctica coast

NASA Astrophysics Data System (ADS)

Roberto, Nicoletta; Adirosi, Elisa; Montopoli, Mario; Baldini, Luca; Dietrich, Stefano; Porcù, Federico

2017-04-01

The primary mass input of the Antarctic ice sheet is snow precipitation which is one of the most direct climatic indicators. Climatic model simulations of precipitations over Antarctica is an important task to assess the variation of ice sheet over long temporal scale. The main source of precipitation information in Antarctica regions derive from satellite observations. However, satellite measurements and products need to be calibrated and validated with observations from ground sensors. In spite of their key role, precipitation measurements at ground are scarce and not appropriate to provide the specific characteristic of precipitation particles that influence the scattering and absorption properties of ice particles. Recently, different stations in Antarctica (Princess Elizabeth, McMurdo, Mario Zucchelli) are equipping observatories for cloud and precipitation observations. The setup of the observatory at the Italian Station, Mario Zucchelli (MZ) plans to integrate the current instrumentation for weather measurements with other instruments specific for precipitation observations, in particular, a 24-GHz vertical pointing radar and a laser disdrometer Parsivel. The synergetic use of the set of instruments allows for characterizing precipitation and studying properties of Antarctic precipitation such as dimension, shapes, fall behavior, density of particles, particles size distribution, particles terminal velocity, reflectivity factor and including some information on their vertical extent. Last November, the OTT Parsivel disdrometer was installed on the roof of a logistic container (at 6 m of height) of the MZ station (Latitude 74° 41' 42" S; Longitude 164° 07' 23E") in the Terranova Bay. The disdrometer measures size and fall velocity of particles, passing through a laser matrix from which the Particle Size Distribution (PSD) is obtained. In addition, some products such as reflectivity factor, snow rate and snow accumulation can be inferred by properly

Annually-resolved temperature reconstructions of the past 2000 years from Dome-Fuji, East Antarctica

NASA Astrophysics Data System (ADS)

Motizuki, Yuko; Takahashi, Kazuya; Nakai, Yoichi; Motoyama, Hideaki

2016-04-01

We present annually-resolved temperature and SST reconstructions of the past 2000 years based on water (oxygen and deuterium) isotope measurement on a shallow ice core drilled in 2010 at Dome Fuji station, East Antarctica. These time series records will be an essential contribution to the PAGES 2k project from sparse data area in Antarctica. Dome Fuji station is located on a summit of Dronning Maud Land at an altitude of 3810 m a.s.l. (above sea level) (77o19'01'' S, 39o42'12'' E) in East Antarctica. The 10 m depth mean snow temperature at Dome Fuji is -57.3oC1). The inland area around Dome Fuji has been recognized to be especially unique: The snow and ice there contain much stratospheric information. The direct evidence for this comes from tritium contents originated from the nuclear bomb tests in the 1960s; the tritium fallout at the Dome Fuji site is outstandingly high among 16 snow pit samples widely collected over Antarctica2). To date the concerned Dome Fuji ice core, we applied volcanic signature matching to transfer the West Antarctic Ice Sheet (WAIS) Divide ice core chronology constructed by annual layer counting as used in the study by Sigl et al. (2014)3). In our presentation, we confine ourselves to discuss the oscillation periodicity that we observed in the oxygen isotope record in our data: The periods of approximately 10, 20, and 200 years were found. We will present the time series analyses for this in detail, and will discuss the origin of this periodicity. References: 1) Kameda, T., Motoyama, H., Fujita, S., and Takahashi, S.: "Past temporal and spatial variability of surface mass balance at Dome Fuji", East Antarctica, by the stake method from 1995 to 2006, J. Glaciol., 54, 107-116, 2008. 2) Fourre, E., Jean-Baptiste, P., Dapoigny, A., Baumier, D., Petit, J.-R., and Jouzel, J.: "Past and recent tritium levels in Arctic and Antarctic polar caps", Earth Planet. Sc. Lett., 245, 56-64, 2006. 3) Sigl, M., J. McConnell, M. Toohey, M. Curran, S. Das, R

Deglacial temperature history of West Antarctica

USGS Publications Warehouse

Cuffey, Kurt M.; Clow, Gary D.; Steig, Eric J.; Buizert, Christo; Fudge, T.J.; Koutnik, Michelle; Waddington, Edwin D.; Alley, Richard B.; Severinghaus, Jeffrey P.

2016-01-01

The most recent glacial to interglacial transition constitutes a remarkable natural experiment for learning how Earth’s climate responds to various forcings, including a rise in atmospheric CO2. This transition has left a direct thermal remnant in the polar ice sheets, where the exceptional purity and continual accumulation of ice permit analyses not possible in other settings. For Antarctica, the deglacial warming has previously been constrained only by the water isotopic composition in ice cores, without an absolute thermometric assessment of the isotopes’ sensitivity to temperature. To overcome this limitation, we measured temperatures in a deep borehole and analyzed them together with ice-core data to reconstruct the surface temperature history of West Antarctica. The deglacial warming was 11.3±1.8∘">11.3±1.8∘11.3±1.8∘C, approximately two to three times the global average, in agreement with theoretical expectations for Antarctic amplification of planetary temperature changes. Consistent with evidence from glacier retreat in Southern Hemisphere mountain ranges, the Antarctic warming was mostly completed by 15 kyBP, several millennia earlier than in the Northern Hemisphere. These results constrain the role of variable oceanic heat transport between hemispheres during deglaciation and quantitatively bound the direct influence of global climate forcings on Antarctic temperature. Although climate models perform well on average in this context, some recent syntheses of deglacial climate history have underestimated Antarctic warming and the models with lowest sensitivity can be discounted.

Deglacial temperature history of West Antarctica

PubMed Central

Clow, Gary D.; Steig, Eric J.; Buizert, Christo; Fudge, T. J.; Koutnik, Michelle; Waddington, Edwin D.; Alley, Richard B.

2016-01-01

The most recent glacial to interglacial transition constitutes a remarkable natural experiment for learning how Earth’s climate responds to various forcings, including a rise in atmospheric CO2. This transition has left a direct thermal remnant in the polar ice sheets, where the exceptional purity and continual accumulation of ice permit analyses not possible in other settings. For Antarctica, the deglacial warming has previously been constrained only by the water isotopic composition in ice cores, without an absolute thermometric assessment of the isotopes’ sensitivity to temperature. To overcome this limitation, we measured temperatures in a deep borehole and analyzed them together with ice-core data to reconstruct the surface temperature history of West Antarctica. The deglacial warming was 11.3±1.8∘C, approximately two to three times the global average, in agreement with theoretical expectations for Antarctic amplification of planetary temperature changes. Consistent with evidence from glacier retreat in Southern Hemisphere mountain ranges, the Antarctic warming was mostly completed by 15 kyBP, several millennia earlier than in the Northern Hemisphere. These results constrain the role of variable oceanic heat transport between hemispheres during deglaciation and quantitatively bound the direct influence of global climate forcings on Antarctic temperature. Although climate models perform well on average in this context, some recent syntheses of deglacial climate history have underestimated Antarctic warming and the models with lowest sensitivity can be discounted. PMID:27911783

Oral yeast colonization throughout pregnancy.

PubMed

Rio, R; Simões-Silva, L; Garro, S; Silva, M-J; Azevedo, Á; Sampaio-Maia, B

2017-03-01

Recent studies suggest that placenta may harbour a unique microbiome that may have origin in maternal oral microbiome. Although the major physiological and hormonal adjustments observed in pregnant women lead to biochemical and microbiological modifications of the oral environment, very few studies evaluated the changes suffered by the oral microbiota throughout pregnancy. So, the aim of our study was to evaluate oral yeast colonization throughout pregnancy and to compare it with non-pregnant women. The oral yeast colonization was assessed in saliva of 30 pregnant and non-pregnant women longitudinally over a 6-months period. Demographic information was collected, a non-invasive intra-oral examination was performed and saliva flow and pH were determined. Pregnant and non-pregnant groups were similar regarding age and level of education. Saliva flow rate did not differ, but saliva pH was lower in pregnant than in non-pregnant women. Oral yeast prevalence was higher in pregnant than in non-pregnant women, either in the first or in the third trimester, but did not attain statistical significance. In individuals colonized with yeast, the total yeast quantification (Log10CFU/mL) increase from the 1st to the 3rd trimester in pregnant women, but not in non-pregnant women. Pregnancy may favour oral yeast growth that may be associated with an acidic oral environment.

Biotechnological Applications of Dimorphic Yeasts

NASA Astrophysics Data System (ADS)

Doiphode, N.; Joshi, C.; Ghormade, V.; Deshpande, M. V.

The dimorphic yeasts have the equilibrium between spherical growth (budding) and polarized (hyphal or pseudohyphal tip elongation) which can be triggered by change in the environmental conditions. The reversible growth phenomenon has made dimorphic yeasts as an useful model to understand fungal evolution and fungal differentiation, in general. In nature dimorphism is clearly evident in plant and animal fungal pathogens, which survive and most importantly proliferate in the respective hosts. However, number of organisms with no known pathogenic behaviour also show such a transition, which can be exploited for the technological applications due to their different biochemical make up under different morphologies. For instance, chitin and chitosan production using dimorphic Saccharomyces, Mucor, Rhizopus and Benjaminiella, oil degradation and biotransformation with yeast-form of Yarrowia species, bioremediation of organic pollutants, exopolysac-charide production by yeast-phase of Aureobasidium pullulans, to name a few. Myrothecium verrucaria can be used for seed dressing in its yeast form and it produces a mycolytic enzyme complex in its hyphal-form for the biocontrol of fungal pathogens, while Beauveria bassiana and other entomopathogens kill the insect pest by producing yeast- like cells in the insect body. The form-specific expression of protease, chitinase, lipase, ornithine decarboxylase, glutamate dehydrogenases, etc. make Benjaminiella poitrasii, Basidiobolus sp., and Mucor rouxii strains important in bioremediation, nanobiotechnology, fungal evolution and other areas.

Yeasts of the soil – obscure but precious

PubMed Central

2018-01-01

Abstract Pioneering studies performed in the nineteenth century demonstrated that yeasts are present in below‐ground sources. Soils were regarded more as a reservoir for yeasts that reside in habitats above it. Later studies showed that yeast communities in soils are taxonomically diverse and different from those above‐ground. Soil yeasts possess extraordinary adaptations that allow them to survive in a wide range of environmental conditions. A few species are promising sources of yeast oils and have been used in agriculture as potential antagonists of soil‐borne plant pathogens or as plant growth promoters. Yeasts have been studied mainly in managed soils such as vineyards, orchards and agricultural fields, and to a lesser extent under forests and grasslands. Our knowledge of soil yeasts is further biased towards temperate and boreal forests, whereas data from Africa, the Americas and Asia are scarce. Although soil yeast communities are often species‐poor in a single sample, they are more diverse on the biotope level. Soil yeasts display pronounced endemism along with a surprisingly high proportion of currently unidentified species. However, like other soil inhabitants, yeasts are threatened by habitat alterations owing to anthropogenic activities such as agriculture, deforestation and urbanization. In view of the rapid decline of many natural habitats, the study of soil yeasts in undisturbed or low‐managed biotopes is extremely valuable. The purpose of this review is to encourage researchers, both biologists and soil scientists, to include soil yeasts in future studies. PMID:29365211

How Important Is Research on Pollution Levels in Antarctica? Historical Approach, Difficulties and Current Trends.

PubMed

Szopińska, Małgorzata; Namieśnik, Jacek; Polkowska, Żaneta

Despite the fact that Antarctica is a continent notably free from large negative impact of human activities, literature data can be the basis for concluding that this is not an area free from anthropogenic pollutants. Pollutants, which are identified in various elements of the environment of Antarctica, are mostly connected with long-range atmospheric transport (LRAT) and deposition in this area. The study presents: a historical overview of research pertaining to the presence of pollutants in entire Antarctica; a description of the development of research on pollutants in various environmental samples conducted in this area since 1960; a detailed description of contemporary analytical research (2000-2014); information on concentration levels of a broad range of pollutants present in various elements of the environment. The data collected can provide grounds for concluding that pollutants present in this area can contribute to gradual degradation of Antarctic ecosystem.

Electron transport chain in a thermotolerant yeast.

PubMed

Mejía-Barajas, Jorge A; Martínez-Mora, José A; Salgado-Garciglia, Rafael; Noriega-Cisneros, Ruth; Ortiz-Avila, Omar; Cortés-Rojo, Christian; Saavedra-Molina, Alfredo

2017-04-01

Yeasts capable of growing and surviving at high temperatures are regarded as thermotolerant. For appropriate functioning of cellular processes and cell survival, the maintenance of an optimal redox state is critical of reducing and oxidizing species. We studied mitochondrial functions of the thermotolerant Kluyveromyces marxianus SLP1 and the mesophilic OFF1 yeasts, through the evaluation of its mitochondrial membrane potential (ΔΨ m ), ATPase activity, electron transport chain (ETC) activities, alternative oxidase activity, lipid peroxidation. Mitochondrial membrane potential and the cytoplasmic free Ca 2+ ions (Ca 2+ cyt) increased in the SLP1 yeast when exposed to high temperature, compared with the mesophilic yeast OFF1. ATPase activity in the mesophilic yeast diminished 80% when exposed to 40° while the thermotolerant SLP1 showed no change, despite an increase in the mitochondrial lipid peroxidation. The SLP1 thermotolerant yeast exposed to high temperature showed a diminution of 33% of the oxygen consumption in state 4. The uncoupled state 3 of oxygen consumption did not change in the mesophilic yeast when it had an increase of temperature, whereas in the thermotolerant SLP1 yeast resulted in an increase of 2.5 times when yeast were grown at 30 o , while a decrease of 51% was observed when it was exposed to high temperature. The activities of the ETC complexes were diminished in the SLP1 when exposed to high temperature, but also it was distinguished an alternative oxidase activity. Our results suggest that the mitochondria state, particularly ETC state, is an important characteristic of the thermotolerance of the SLP1 yeast strain.

Antarctica and global change research

NASA Astrophysics Data System (ADS)

Weller, Gunter; Lange, Manfred

1992-03-01

The Antarctic, including the continent and Southern Ocean with the subantarctic islands, is a critical area in the global change studies under the International Geosphere-Biosphere Program (IGBP) and the World Climate Research Program (WCRP). Major scientific problems include the impacts of climate warming, the ozone hole, and sea level changes. Large-scale interactions between the atmosphere, ice, ocean, and biota in the Antarctic affect the entire global system through feedbacks, biogeochemical cycles, deep-ocean circulation, atmospheric transport of heat, moisture, and pollutants, and changes in ice mass balances. Antarctica is also a rich repository of paleoenvironmental information in its ice sheet and its ocean and land sediments.

Wind profiler installed in Antarctica

NASA Astrophysics Data System (ADS)

Balsley, B. B.; Carey, J.; Woodman, R. F.; Sarango, M.; Urbina, J.; Rodriguez, R.; Ragaini, E.

A VHF (50 MHz) wind profiler was installed in Antarctica at the Peruvian Base “Machu Picchu” on King George Island from January 21 to 26. The wind profiler will provide a first look at atmospheric dynamics over the region.The profiler—the first of its kind in Antarctica—is a National Science Foundationsponsored cooperative project of the University of Colorado, the Geophysical Institute of Peru, the University of Piura (Peru), and the Peruvian Navy. This venture was also greatly facilitated by Peru's Comision Nacional de Asuntos Antartidos and Consejo Nacional de Ciencias y Tecnologia, with additional logis tics support provided by the Argentinean Navy and the Uruguayan Air Force.

Yeasts in floral nectar: a quantitative survey

PubMed Central

Herrera, Carlos M.; de Vega, Clara; Canto, Azucena; Pozo, María I.

2009-01-01

Background and Aims One peculiarity of floral nectar that remains relatively unexplored from an ecological perspective is its role as a natural habitat for micro-organisms. This study assesses the frequency of occurrence and abundance of yeast cells in floral nectar of insect-pollinated plants from three contrasting plant communities on two continents. Possible correlations between interspecific differences in yeast incidence and pollinator composition are also explored. Methods The study was conducted at three widely separated areas, two in the Iberian Peninsula (Spain) and one in the Yucatán Peninsula (Mexico). Floral nectar samples from 130 species (37–63 species per region) in 44 families were examined microscopically for the presence of yeast cells. For one of the Spanish sites, the relationship across species between incidence of yeasts in nectar and the proportion of flowers visited by each of five major pollinator categories was also investigated. Key Results Yeasts occurred regularly in the floral nectar of many species, where they sometimes reached extraordinary densities (up to 4 × 105 cells mm−3). Depending on the region, between 32 and 44 % of all nectar samples contained yeasts. Yeast cell densities in the order of 104 cells mm−3 were commonplace, and densities >105 cells mm−3 were not rare. About one-fifth of species at each site had mean yeast cell densities >104 cells mm−3. Across species, yeast frequency and abundance were directly correlated with the proportion of floral visits by bumble-bees, and inversely with the proportion of visits by solitary bees. Conclusions Incorporating nectar yeasts into the scenario of plant–pollinator interactions opens up a number of intriguing avenues for research. In addition, with yeasts being as ubiquitous and abundant in floral nectars as revealed by this study, and given their astounding metabolic versatility, studies focusing on nectar chemical features should carefully control for the presence

The environmental impact of sewage and wastewater outfalls in Antarctica: An example from Davis station, East Antarctica.

PubMed

Stark, Jonathan S; Corbett, Patricia A; Dunshea, Glenn; Johnstone, Glenn; King, Catherine; Mondon, Julie A; Power, Michelle L; Samuel, Angelingifta; Snape, Ian; Riddle, Martin

2016-11-15

We present a comprehensive scientific assessment of the environmental impacts of an Antarctic wastewater ocean outfall, at Davis station in East Antarctica. We assessed the effectiveness of current wastewater treatment and disposal requirements under the Protocol on Environmental Protection to the Antarctic Treaty. Macerated wastewater has been discharged from an outfall at Davis since the failure of the secondary treatment plant in 2005. Water, sediment and wildlife were tested for presence of human enteric bacteria and antibiotic resistance mechanisms. Epibiotic and sediment macrofaunal communities were tested for differences between sites near the outfall and controls. Local fish were examined for evidence of histopathological abnormalities. Sediments, fish and gastropods were tested for uptake of sewage as measured by stable isotopes of N and C. Escherichia coli carrying antibiotic resistance determinants were found in water, sediments and wildlife (the filter feeding bivalve Laternula eliptica). Fish (Trematomus bernacchii) within close proximity to the outfall had significantly more severe and greater occurrences of histopathological abnormalities than at controls, consistent with exposure to sewage. There was significant enrichment of 15 N in T. bernacchii and the predatory gastropod Neobuccinum eatoni around the outfall, providing evidence of uptake of sewage. There were significant differences between epibiotic and sediment macrofaunal communities at control and outfall sites (<1.5 km), when sites were separated into groups of similar habitat types. Benthic community composition was also strongly related to habitat and environmental drivers such as sea ice. The combined evidence indicated that the discharge of wastewater from the Davis outfall is causing environmental impacts. These findings suggest that conditions in Antarctic coastal locations, such as Davis, are unlikely to be conducive to initial dilution and rapid dispersal of wastewater as required

Interactions between Drosophila and its natural yeast symbionts—Is Saccharomyces cerevisiae a good model for studying the fly-yeast relationship?

PubMed Central

Hoang, Don; Kopp, Artyom

2015-01-01

Yeasts play an important role in the biology of the fruit fly, Drosophila melanogaster. In addition to being a valuable source of nutrition, yeasts affect D. melanogaster behavior and interact with the host immune system. Most experiments investigating the role of yeasts in D. melanogaster biology use the baker’s yeast, Saccharomyces cerevisiae. However, S. cerevisiae is rarely found with natural populations of D. melanogaster or other Drosophila species. Moreover, the strain of S. cerevisiae used most often in D. melanogaster experiments is a commercially and industrially important strain that, to the best of our knowledge, was not isolated from flies. Since disrupting natural host–microbe interactions can have profound effects on host biology, the results from D. melanogaster–S. cerevisiae laboratory experiments may not be fully representative of host–microbe interactions in nature. In this study, we explore the D. melanogaster-yeast relationship using five different strains of yeast that were isolated from wild Drosophila populations. Ingested live yeasts have variable persistence in the D. melanogaster gastrointestinal tract. For example, Hanseniaspora occidentalis persists relative to S. cerevisiae, while Brettanomyces naardenensis is removed. Despite these differences in persistence relative to S. cerevisiae, we find that all yeasts decrease in total abundance over time. Reactive oxygen species (ROS) are an important component of the D. melanogaster anti-microbial response and can inhibit S. cerevisiae growth in the intestine. To determine if sensitivity to ROS explains the differences in yeast persistence, we measured yeast growth in the presence and absence of hydrogen peroxide. We find that B. naardenesis is completely inhibited by hydrogen peroxide, while H. occidentalis is not, which is consistent with yeast sensitivity to ROS affecting persistence within the D. melanogaster gastrointestinal tract. We also compared the feeding preference of D

Interactions between Drosophila and its natural yeast symbionts-Is Saccharomyces cerevisiae a good model for studying the fly-yeast relationship?

PubMed

Hoang, Don; Kopp, Artyom; Chandler, James Angus

2015-01-01

Yeasts play an important role in the biology of the fruit fly, Drosophila melanogaster. In addition to being a valuable source of nutrition, yeasts affect D. melanogaster behavior and interact with the host immune system. Most experiments investigating the role of yeasts in D. melanogaster biology use the baker's yeast, Saccharomyces cerevisiae. However, S. cerevisiae is rarely found with natural populations of D. melanogaster or other Drosophila species. Moreover, the strain of S. cerevisiae used most often in D. melanogaster experiments is a commercially and industrially important strain that, to the best of our knowledge, was not isolated from flies. Since disrupting natural host-microbe interactions can have profound effects on host biology, the results from D. melanogaster-S. cerevisiae laboratory experiments may not be fully representative of host-microbe interactions in nature. In this study, we explore the D. melanogaster-yeast relationship using five different strains of yeast that were isolated from wild Drosophila populations. Ingested live yeasts have variable persistence in the D. melanogaster gastrointestinal tract. For example, Hanseniaspora occidentalis persists relative to S. cerevisiae, while Brettanomyces naardenensis is removed. Despite these differences in persistence relative to S. cerevisiae, we find that all yeasts decrease in total abundance over time. Reactive oxygen species (ROS) are an important component of the D. melanogaster anti-microbial response and can inhibit S. cerevisiae growth in the intestine. To determine if sensitivity to ROS explains the differences in yeast persistence, we measured yeast growth in the presence and absence of hydrogen peroxide. We find that B. naardenesis is completely inhibited by hydrogen peroxide, while H. occidentalis is not, which is consistent with yeast sensitivity to ROS affecting persistence within the D. melanogaster gastrointestinal tract. We also compared the feeding preference of D

Evaluation of Automated Yeast Identification System

NASA Technical Reports Server (NTRS)

McGinnis, M. R.

1996-01-01

One hundred and nine teleomorphic and anamorphic yeast isolates representing approximately 30 taxa were used to evaluate the accuracy of the Biolog yeast identification system. Isolates derived from nomenclatural types, environmental, and clinica isolates of known identity were tested in the Biolog system. Of the isolates tested, 81 were in the Biolog database. The system correctly identified 40, incorrectly identified 29, and was unable to identify 12. Of the 28 isolates not in the database, 18 were given names, whereas 10 were not. The Biolog yeast identification system is inadequate for the identification of yeasts originating from the environment during space program activities.

Genomics and the making of yeast biodiversity.

PubMed

Hittinger, Chris Todd; Rokas, Antonis; Bai, Feng-Yan; Boekhout, Teun; Gonçalves, Paula; Jeffries, Thomas W; Kominek, Jacek; Lachance, Marc-André; Libkind, Diego; Rosa, Carlos A; Sampaio, José Paulo; Kurtzman, Cletus P

2015-12-01

Yeasts are unicellular fungi that do not form fruiting bodies. Although the yeast lifestyle has evolved multiple times, most known species belong to the subphylum Saccharomycotina (syn. Hemiascomycota, hereafter yeasts). This diverse group includes the premier eukaryotic model system, Saccharomyces cerevisiae; the common human commensal and opportunistic pathogen, Candida albicans; and over 1000 other known species (with more continuing to be discovered). Yeasts are found in every biome and continent and are more genetically diverse than angiosperms or chordates. Ease of culture, simple life cycles, and small genomes (∼10-20Mbp) have made yeasts exceptional models for molecular genetics, biotechnology, and evolutionary genomics. Here we discuss recent developments in understanding the genomic underpinnings of the making of yeast biodiversity, comparing and contrasting natural and human-associated evolutionary processes. Only a tiny fraction of yeast biodiversity and metabolic capabilities has been tapped by industry and science. Expanding the taxonomic breadth of deep genomic investigations will further illuminate how genome function evolves to encode their diverse metabolisms and ecologies. Copyright © 2015 Elsevier Ltd. All rights reserved.

Accelerating Yeast Prion Biology using Droplet Microfluidics

NASA Astrophysics Data System (ADS)

Ung, Lloyd; Rotem, Assaf; Jarosz, Daniel; Datta, Manoshi; Lindquist, Susan; Weitz, David

2012-02-01

Prions are infectious proteins in a misfolded form, that can induce normal proteins to take the misfolded state. Yeast prions are relevant, as a model of human prion diseases, and interesting from an evolutionary standpoint. Prions may also be a form of epigenetic inheritance, which allow yeast to adapt to stressful conditions at rates exceeding those of random mutations and propagate that adaptation to their offspring. Encapsulation of yeast in droplet microfluidic devices enables high-throughput measurements with single cell resolution, which would not be feasible using bulk methods. Millions of populations of yeast can be screened to obtain reliable measurements of prion induction and loss rates. The population dynamics of clonal yeast, when a fraction of the cells are prion expressing, can be elucidated. Furthermore, the mechanism by which certain strains of bacteria induce yeast to express prions in the wild can be deduced. Integrating the disparate fields of prion biology and droplet microfluidics reveals a more complete picture of how prions may be more than just diseases and play a functional role in yeast.

Ecology of extremophile yeasts

NASA Astrophysics Data System (ADS)

Vishniac, Helen S.

1998-07-01

Capsular Cryptococcus spp. dominate in desert soils. The most extreme conditions are encountered by Cryptococcus vishniacii which dominates in the arid highlands of the Ross desert of Antarctica by virtue of its ability to grow at low temperatures, minimal nutritional requirements, tolerance of low population densities, and survival skills, although this species is neither osmo-nor halotolerant, characters which are associated with higher energy requirements.

Reconstruction of the pre-breakup crustal thickness in Australia/Antarctica

NASA Astrophysics Data System (ADS)

Goncharov, A.

2003-04-01

Some 140 million years ago, Australia and Antarctica were parts of a single continent Gondwana. Before it broke into parts there was a process of extensive crustal extension. Thinning of the crust during this process was accompanied by deposition of vast amounts of sedimentary rocks along Australia’s Southern Margin, where the total sediment thickness locally (e.g., Ceduna Sub-basin) reaches 15 km. These sedimentary rocks may have been involved in oil and gas formation. Knowledge of the pre-breakup crustal thickness in Australia/Antarctica is important because it provides additional constraints for plate tectonic reconstructions of the two continents and ultimately leads to a more accurate assessment of the petroleum potential of Australia’s Southern Margin. Most reliable estimates of crustal thickness come from refraction seismic measurements which define the depth to the Moho boundary, where seismic velocity increases to 8 km/s or more. Such measurements were used in this research for Australia. Unlike Australia, Antarctica has poor coverage of seismic measurements of crustal thickness. For Antarctica, seismic measurements were supplemented by values predicted by the regression between seismically defined crustal thickness and upwardly continued gravity. Upward continuation emphasizes the effects of variations in crustal thickness in the total gravity signal. After compilation and computation of crustal thickness was completed, data points located on Australian continent were reconstructed to their pre-breakup position. The most up-to-date finite rotation parameters defining the movement of Australia relative to Antarctica were used in this process. To ensure that pre-breakup extension and thinning of the crust (during the 140 to 95 Ma time interval) were accounted for, points with crustal thickness values less than 30 km on both Australian and Antarctic margins were excluded from subsequent gridding. Crust thinner than 30 km was taken to have been affected

[Groups and sources of yeasts in house dust].

PubMed

Glushakova, A M; Zheltikova, T M; Chernov, I Iu

2004-01-01

House dust contains bacteria, mycelial fungi, microarthropods, and yeasts. The house dust samples collected in 25 apartments in Moscow and the Moscow region were found to contain yeasts belonging to the genera Candida, Cryptococcus, Debaryomyces, Rhodotorula, Sporobolomyces, and Trichosporon. The most frequently encountered microorganisms were typical epiphytic yeasts, such as Cryptococcus diffluens and Rhodotorula mucilaginosa, which are capable of long-term preservation in an inactive state. The direct source of epiphytic yeasts occurring in the house dust might be the indoor plants, which were contaminated with these yeasts, albeit to a lesser degree than outdoor plants. Along with the typical epiphytic yeasts, the house dust contained the opportunistic yeast pathogens Candida catenulata, C. guillermondii, C. haemulonii, C. rugosa, and C. tropicalis, which are known as the causal agents of candidiasis. We failed to reveal any correlation between the abundance of particular yeast species in the house dust, residential characteristics, and the atopic dermatitis of the inhabitants.

Increased Ocean Access to Totten Glacier, East Antarctica

NASA Astrophysics Data System (ADS)

Blankenship, D. D.; Greenbaum, J. S.; Young, D. A.; Richter, T. G.; Roberts, J. L.; Aitken, A.; Legresy, B.; Warner, R. C.; van Ommen, T. D.; Siegert, M. J.

2015-12-01

The Totten Glacier is the largest ice sheet outlet in East Antarctica, draining 3.5 meters of eustatic sea level potential from the Aurora Subglacial Basin (ASB) into the Sabrina Coast. Recent work has shown that the ASB has drained and filled many times since largescale glaciation began including evidence that it collapsed during the Pliocene. Steady thinning rates observed near Totten Glacier's grounding line since the beginning of the satellite altimetry record are the largest in East Antarctica and the nature of the thinning suggests that it is driven by enhanced basal melting due to ocean processes. Warm Modified Circumpolar Deep Water (MCDW), which has been linked to glacier retreat in West Antarctica, has been observed in summer and winter on the Sabrina Coast continental shelf in the 400-500 m depth range. Using airborne geophysical data acquired over multiple years we delineate seafloor valleys connecting the inner continental shelf to the cavity beneath Totten Glacier that cut through a large sill centered along the ice shelf calving front. The sill shallows to depths of about 300 mbsl and was likely a grounding line pinning point during Holocene retreat, however, the two largest seafloor valleys are deeper than the observed range of thermocline depths. The deeper of the two valleys, a 4 km-wide trough, connects to the ice shelf cavity through an area of the coastline that was previously believed to be grounded but that our analysis demonstrates is floating, revealing a second, deeper entryway to ice shelf cavity. The previous coastline was charted using satellite-based mapping techniques that infer subglacial properties based on surface expression and behavior; the new geophysical analysis techniques we use enable inferences of subglacial characteristics using direct observations of the ice-water interface. The results indicate that Totten Glacier and, by extension, the Aurora Subglacial Basin are vulnerable to MCDW that has been observed on the nearby

Weathering process in Sør Rondane Mountains, East Antarctica

NASA Astrophysics Data System (ADS)

Kanamaru, T.; Suganuma, Y.; Oiwane, H.; Miura, M.; Okuno, J.; Hayakawa, H.

2016-12-01

Weathering process under the hyper-arid and hypothermal environment is a key to understand the geomorphogic process and landscape evolution in Antarctica and on Mars. A nunber of studies have focused on weathering process of basaltic rocks in Antarctica, however, the nature of the weathering process of plutonic type rock, a common rock type on the Earth, have been less focused and remain unclear. Here, we report the physical/chemical weathering process of the granitic rocks obtained from Dronning Maud Land in East Antarctica based on a multiplicity of petrological approaches. Loss on Ignition (LOI) and major element composition of the crust and core of the rock samples indicate that chemical weathering process in this area seems to be very limited. The microscopic observations and laser-Raman micro spectroscopy for thin sections from the crust and core indicate that goethite grains are formed mainly in the vein around the crust, which is consistent with the higher Fe3+/Fe2+ contrast from the core to crust. A negative correlation between the rock hardness and color strength index (CSI) values also indicate that crust of rock samples tend to less hard than core due to cracking of the rock samples and following goethite formation. On the other hand, EPMA analysis indicates that original Fe-Ti oxide grains in the core of rock samples are damaged by weathering, and altered to hematite, and to non-stoichiometric Fe-Ti compound associated with ilmenite grans in case of the higher relative height samples. These reveal that the weathering process of the plutonic rocks under the hyper-cold and hypothermal environment are mainly controlled by oxidation, including iron hydroxide formation in the veins formed by mechanical distraction, and Fe-Ti oxide alteration in rock interior.

Soils of the Galindez Island, Argentine archipelago, Western Antarctica

NASA Astrophysics Data System (ADS)

Abakumov, Evgeny; Parnikoza, Ivan

2015-04-01

Antarctic Peninsula is a part of Antarctica which is characterized by increased soil diversity, caused by specific of parent materials and diversity of non-vascular and vascular plants. Soils of Galindez Island have been investigated during the 18-th Ukranian Antarctic Expedition 2013/14. This Island situated in Argentine archipelago (coastal part of Antarctic Peninsula). Soils of Galindez Island presented by following types: Leptosols, Lithosols, Histic Lithosols and Leptosols and some Gleyic soils, located in lowlands and coastal parts. An average solum profile thickness is 3-19 cm which result from the small depth of debris's, underplayed by massive crystallic rocks. The permafrost layer is located within the massive rock, but not in coarse friable parent material. The soils with bird influence are widely spread both in coastal and central part of Island. In the coastal parts we can find typical Ornithosols in the penguin rockeries areas. The main aim of our investigation was characterization of soils formed under vegetation, exactly under Deschampsia antarctica Desv. localities. Argentine Islands is the central part of D. antarctica spreading area in region of Antarctic peninsula. Probably, these islands colonized by hairgrass mainly due to ornitogenic activity. So, coastal population appearance related with Larus dominicanus nest areas and feeding activity. Thus, we found typical post ornithogenic soils here. This kind of soils we also observed in population of hairgrass of Galindez mainland where it was connected with the other Antarctic bird - Catharacta maccormicki activity. Thus, the soil diversity and soil geochemistry of the Galindez Island are closely related to the activity of birds. The spatial pattern of soils, their chemistry and organic matter quality is discussed in relation with distribution of bird nesting and feeding activity.

GRACE Gravity Data Target Possible Mega-impact in North Central Wilkes Land, Antarctica

NASA Technical Reports Server (NTRS)

vonFrese, Ralph R. B.; Wells, Stuart B.; Potts. Laramie V.; Gaya-Pique, Luis R.; Golynsky, Alexander V.; Hernandez, Orlando; Kim, Jeong Woo; Kim, Hyung Rae; Hwang, Jong Sun; Taylor, Patrick T.

2005-01-01

A prominent positive GRACE satellite-measured free-air gravity anomaly over regionally depressed subglacial topography may identify a mascon centered on (70 deg S, 120 deg E) between the Gamburtsev and Transantarctic Mountains of East Antarctica. Being more than twice the size of the Chicxulub crater, the inferred Wilkes Land impact crater is a strong candidate for a Gondwana source of the greatest extinction of life at the end of the Permian. Its ring structure intersects the coastline and thus may have strongly influenced the Cenozoic rifting of East Antarctica from Australia that resulted in the enigmatic lack of crustal thinning on the conjugate Australian block.

Application of a Terrestrial LIDAR System for Elevation Mapping in Terra Nova Bay, Antarctica.

PubMed

Cho, Hyoungsig; Hong, Seunghwan; Kim, Sangmin; Park, Hyokeun; Park, Ilsuk; Sohn, Hong-Gyoo

2015-09-16

A terrestrial Light Detection and Ranging (LIDAR) system has high productivity and accuracy for topographic mapping, but the harsh conditions of Antarctica make LIDAR operation difficult. Low temperatures cause malfunctioning of the LIDAR system, and unpredictable strong winds can deteriorate data quality by irregularly shaking co-registration targets. For stable and efficient LIDAR operation in Antarctica, this study proposes and demonstrates the following practical solutions: (1) a lagging cover with a heating pack to maintain the temperature of the terrestrial LIDAR system; (2) co-registration using square planar targets and two-step point-merging methods based on extracted feature points and the Iterative Closest Point (ICP) algorithm; and (3) a georeferencing module consisting of an artificial target and a Global Navigation Satellite System (GNSS) receiver. The solutions were used to produce a topographic map for construction of the Jang Bogo Research Station in Terra Nova Bay, Antarctica. Co-registration and georeferencing precision reached 5 and 45 mm, respectively, and the accuracy of the Digital Elevation Model (DEM) generated from the LIDAR scanning data was ±27.7 cm.

Methods for Combination of GRACE Gravimetry and ICESat Altimetry over Antarctica on Monthly Timescales

NASA Astrophysics Data System (ADS)

Hardy, R. A.; Nerem, R. S.; Wiese, D. N.

2017-12-01

Gravity and surface elevation change data altimetry provide different perspectives on mass variability in Antarctica. In anticipation of the concurrent operation of the successors of GRACE and ICESat, GRACE Follow-On and ICESat-2, we approach the problem of combining these data for enhanced spatial resolution and disaggregation of Antarctica's major mass transport processes. Using elevation changes gathered from over 500 million overlapping ICESat laser shot pairs between 2003 and 2009, we construct gridded models of Antarctic elevation change for each ICESat operational period. Comparing these elevation grids with temporally registered JPL RL05M mascon solutions, we exploit the relationship between surface mass flux and elevation change to inform estimates of effective surface density. These density estimates enable solutions for glacial isostatic adjustment and monthly estimates of surface mass change. These are used alongside spatial statistics from both the data and models of surface mass balance to produce enhanced estimates of Antarctic mass balance. We validate our solutions by modeling the effects of elastic loading and GIA from these solutions on the vertical motion of Antarctica's GNSS sites.

Genomics and the making of yeast biodiversity

USDA-ARS?s Scientific Manuscript database

Yeasts are unicellular fungi that do not form fruiting bodies. Although the yeast lifestyle has evolved multiple times, most known species belong to the subphylum Saccharomycotina (syn. Hemiascomycota, hereafter yeasts). This diverse group includes the premier eukaryotic model system, Saccharomyces ...

The Age of Rift-Related Basalts in East Antarctica

NASA Astrophysics Data System (ADS)

Leitchenkov, G. L.; Belyatsky, B. V.; Kaminsky, V. D.

2018-01-01

The Lambert Rift, which is a large intracontinental rift zone in East Antarctica, developed over a long period of geological time, beginning from the Late Paleozoic, and its evolution was accompanied by magmatic activity. The latest manifestation of magmatism is eruption of alkaline olivine-leucite basalts on the western side of the Lambert Rift; Rb-Sr dating referred its time to the Middle Eocene, although its genesis remained vague. In order to solve this problem, we found geochronometer minerals in basaltic samples and 68 apatite grains appeared to be suitable for analysis. Their ages and ages of host basalts, determined by the U-Pb local method on the SIMS SHRIMP-II, were significantly different (323 ± 31 Ma) from those assumed earlier. This age corresponds to the earliest stage of crustal extension in East Antarctica and to most of Gondwana. The new data crucially change the ideas about the evolution of Lambert Rift and demonstrate the ambiguity of K-Ar dates of the alkali effusive formed under long-term rifting.

21 CFR 172.590 - Yeast-malt sprout extract.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 21 Food and Drugs 3 2014-04-01 2014-04-01 false Yeast-malt sprout extract. 172.590 Section 172.590... Substances § 172.590 Yeast-malt sprout extract. Yeast-malt sprout extract, as described in this section, may... produced by partial hydrolysis of yeast extract (derived from Saccharomyces cereviseae, Saccharomyces...

Yeasts Diversity in Fermented Foods and Beverages

NASA Astrophysics Data System (ADS)

Tamang, Jyoti Prakash; Fleet, Graham H.

People across the world have learnt to culture and use the essential microorganisms for production of fermented foods and alcoholic beverages. A fermented food is produced either spontaneously or by adding mixed/pure starter culture(s). Yeasts are among the essential functional microorganisms encountered in many fermented foods, and are commercially used in production of baker's yeast, breads, wine, beer, cheese, etc. In Asia, moulds are predominant followed by amylolytic and alcohol-producing yeasts in the fermentation processes, whereas in Africa, Europe, Australia and America, fermented products are prepared exclusively using bacteria or bacteria-yeasts mixed cultures. This chapter would focus on the varieties of fermented foods and alcoholic beverages produced by yeasts, their microbiology and role in food fermentation, widely used commercial starters (pilot production, molecular aspects), production technology of some common commercial fermented foods and alcoholic beverages, toxicity and food safety using yeasts cultures and socio-economy

An interdecadal climate dipole between Northeast Asia and Antarctica over the past five centuries

NASA Astrophysics Data System (ADS)

Fang, Keyan; Chen, Deliang; Guo, Zhengtang; Zhao, Yan; Frank, David; He, Maosheng; Zhou, Feifei; Shi, Feng; Seppä, Heikki; Zhang, Peng; Neukom, Raphael

2018-03-01

Climate models emphasize the need to investigate inter-hemispheric climatic interactions. However, these models often underestimate the inter-hemispheric differences in climate change. With the wide application of reanalysis data since 1948, we identified a dipole pattern between the geopotential heights (GPHs) in Northeast Asia and Antarctica on the interdecadal scale in boreal summer. This Northeast Asia/Antarctica (NAA) dipole pattern is not conspicuous on the interannual scale, probably in that the interannual inter-hemispheric climate interaction is masked by strong interannual signals in the tropics associated with the El Niño-Southern Oscillation (ENSO). Unfortunately, the instrumental records are not sufficiently long-lasting to detect the interdecadal variability of the NAA. We thus reconstructed GPHs since 1565, making using the proxy records mostly from tree rings in Northeast Asia and ice cores from Antarctica. The strength of the NAA is time-varying and it is most conspicuous in the eighteenth century and after the late twentieth century. The strength of the NAA matches well with the variations of the solar radiation and tends to increase in along with its enhancement. In boreal summer, enhanced heating associated with high solar radiation in the Northern Hemisphere drives more air masses from the South to the North. This inter-hemispheric interaction is particularly strong in East Asia as a result of the Asian summer monsoon. Northeast Asia and Antarctica appear to be the key regions responsible for inter-hemispheric interactions on the interdecadal scale in boreal summer since they are respectively located at the front and the end of this inter-hemispheric trajectory.

Regional geology mapping using satellite-based remote sensing approach in Northern Victoria Land, Antarctica

NASA Astrophysics Data System (ADS)

Pour, Amin Beiranvand; Park, Yongcheol; Park, Tae-Yoon S.; Hong, Jong Kuk; Hashim, Mazlan; Woo, Jusun; Ayoobi, Iman

2018-06-01

Satellite remote sensing imagery is especially useful for geological investigations in Antarctica because of its remoteness and extreme environmental conditions that constrain direct geological survey. The highest percentage of exposed rocks and soils in Antarctica occurs in Northern Victoria Land (NVL). Exposed Rocks in NVL were part of the paleo-Pacific margin of East Gondwana during the Paleozoic time. This investigation provides a satellite-based remote sensing approach for regional geological mapping in the NVL, Antarctica. Landsat-8 and the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) datasets were used to extract lithological-structural and mineralogical information. Several spectral-band ratio indices were developed using Landsat-8 and ASTER bands and proposed for Antarctic environments to map spectral signatures of snow/ice, iron oxide/hydroxide minerals, Al-OH-bearing and Fe, Mg-OH and CO3 mineral zones, and quartz-rich felsic and mafic-to-ultramafic lithological units. The spectral-band ratio indices were tested and implemented to Level 1 terrain-corrected (L1T) products of Landsat-8 and ASTER datasets covering the NVL. The surface distribution of the mineral assemblages was mapped using the spectral-band ratio indices and verified by geological expeditions and laboratory analysis. Resultant image maps derived from spectral-band ratio indices that developed in this study are fairly accurate and correspond well with existing geological maps of the NVL. The spectral-band ratio indices developed in this study are especially useful for geological investigations in inaccessible locations and poorly exposed lithological units in Antarctica environments.

Genetics of Yeasts

NASA Astrophysics Data System (ADS)

Querol, Amparo; Fernández-Espinar, M. Teresa; Belloch, Carmela

The use of yeasts in biotechnology processes dates back to ancient days. Before 7000 BC, beer was produced in Sumeria. Wine was made in Assyria in 3500 BC, and ancient Rome had over 250 bakeries, which were making leavened bread by 100 BC. And milk has been made into Kefyr and Koumiss in Asia for many centuries (Demain, Phaff, & Kurtzman, 1999). However, the importance of yeast in the food and beverage industries was only realized about 1860, when their role in food manufacturing became evident.

21 CFR 172.590 - Yeast-malt sprout extract.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Yeast-malt sprout extract. 172.590 Section 172.590... CONSUMPTION Flavoring Agents and Related Substances § 172.590 Yeast-malt sprout extract. Yeast-malt sprout... prescribed conditions: (a) The additive is produced by partial hydrolysis of yeast extract (derived from...

21 CFR 172.590 - Yeast-malt sprout extract.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 21 Food and Drugs 3 2013-04-01 2013-04-01 false Yeast-malt sprout extract. 172.590 Section 172.590... CONSUMPTION Flavoring Agents and Related Substances § 172.590 Yeast-malt sprout extract. Yeast-malt sprout... prescribed conditions: (a) The additive is produced by partial hydrolysis of yeast extract (derived from...

21 CFR 172.590 - Yeast-malt sprout extract.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 21 Food and Drugs 3 2012-04-01 2012-04-01 false Yeast-malt sprout extract. 172.590 Section 172.590... CONSUMPTION Flavoring Agents and Related Substances § 172.590 Yeast-malt sprout extract. Yeast-malt sprout... prescribed conditions: (a) The additive is produced by partial hydrolysis of yeast extract (derived from...

21 CFR 172.590 - Yeast-malt sprout extract.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 21 Food and Drugs 3 2011-04-01 2011-04-01 false Yeast-malt sprout extract. 172.590 Section 172.590... CONSUMPTION Flavoring Agents and Related Substances § 172.590 Yeast-malt sprout extract. Yeast-malt sprout... prescribed conditions: (a) The additive is produced by partial hydrolysis of yeast extract (derived from...

Abrupt climate warming in East Antarctica during the early Holocene

NASA Astrophysics Data System (ADS)

Cremer, Holger; Heiri, Oliver; Wagner, Bernd; Wagner-Cremer, Friederike

2007-08-01

We report a centennial-scale warming event between 8600 and 8400 cal BP from Amery Oasis, East Antarctica, that is documented by the geochemical record in a lacustrine sediment sequence. The organic carbon content, the C/S ratio, and the sedimentation rate in this core have distinctly elevated values around 8500 y ago reflecting relatively warm and ice-free conditions that led to well-ventilated conditions in the lake and considerable sedimentation of both autochthonous and allochthonous organic matter on the lake bottom. This abrupt warming event occurred concurrently with reported warm climatic conditions in the Southern Ocean while the climate in central East Antarctic remained cold. The comparison of the spatial and temporal variability of warm climatic periods documented in various terrestrial, marine, and glacial archives from East Antarctica elucidates the uniqueness of the centennial-scale warming event in the Amery Oasis. We also discuss a possible correlation of the Amery warming event with the abrupt climatic deterioration around 8200 cal BP on the Northern Hemisphere.

Transcriptome of the Antarctic brooding gastropod mollusc Margarella antarctica.

PubMed

Clark, Melody S; Thorne, Michael A S

2015-12-01

454 RNA-Seq transcriptome data were generated from foot tissue of the Antarctic brooding gastropod mollusc Margarella antarctica. A total of 6195 contigs were assembled de novo, providing a useful resource for researchers with an interest in Antarctic marine species, phylogenetics and mollusc biology, especially shell production. Copyright © 2015 Elsevier B.V. All rights reserved.

Yeasts in sustainable bioethanol production: A review.

PubMed

Mohd Azhar, Siti Hajar; Abdulla, Rahmath; Jambo, Siti Azmah; Marbawi, Hartinie; Gansau, Jualang Azlan; Mohd Faik, Ainol Azifa; Rodrigues, Kenneth Francis

2017-07-01

Bioethanol has been identified as the mostly used biofuel worldwide since it significantly contributes to the reduction of crude oil consumption and environmental pollution. It can be produced from various types of feedstocks such as sucrose, starch, lignocellulosic and algal biomass through fermentation process by microorganisms. Compared to other types of microoganisms, yeasts especially Saccharomyces cerevisiae is the common microbes employed in ethanol production due to its high ethanol productivity, high ethanol tolerance and ability of fermenting wide range of sugars. However, there are some challenges in yeast fermentation which inhibit ethanol production such as high temperature, high ethanol concentration and the ability to ferment pentose sugars. Various types of yeast strains have been used in fermentation for ethanol production including hybrid, recombinant and wild-type yeasts. Yeasts can directly ferment simple sugars into ethanol while other type of feedstocks must be converted to fermentable sugars before it can be fermented to ethanol. The common processes involves in ethanol production are pretreatment, hydrolysis and fermentation. Production of bioethanol during fermentation depends on several factors such as temperature, sugar concentration, pH, fermentation time, agitation rate, and inoculum size. The efficiency and productivity of ethanol can be enhanced by immobilizing the yeast cells. This review highlights the different types of yeast strains, fermentation process, factors affecting bioethanol production and immobilization of yeasts for better bioethanol production.

Yeast and Mammalian Metallothioneins Functionally Substitute for Yeast Copper-Zinc Superoxide Dismutase

NASA Astrophysics Data System (ADS)

Tamai, Katherine T.; Gralla, Edith B.; Ellerby, Lisa M.; Valentine, Joan S.; Thiele, Dennis J.

1993-09-01

Copper-zinc superoxide dismutase catalyzes the disproportionation of superoxide anion to hydrogen peroxide and dioxygen and is thought to play an important role in protecting cells from oxygen toxicity. Saccharomyces cerevisiae strains lacking copper-zinc superoxide dismutase, which is encoded by the SOD1 gene, are sensitive to oxidative stress and exhibit a variety of growth defects including hypersensitivity to dioxygen and to superoxide-generating drugs such as paraquat. We have found that in addition to these known phenotypes, SOD1-deletion strains fail to grow on agar containing the respiratory carbon source lactate. We demonstrate here that expression of the yeast or monkey metallothionein proteins in the presence of copper suppresses the lactate growth defect and some other phenotypes associated with SOD1-deletion strains, indicating that copper metallothioneins substitute for copper-zinc superoxide dismutase in vivo to protect cells from oxygen toxicity. Consistent with these results, we show that yeast metallothionein mRNA levels are dramatically elevated under conditions of oxidative stress. Furthermore, in vitro assays demonstrate that yeast metallothionein, purified or from whole-cell extracts, exhibits copper-dependent antioxidant activity. Taken together, these data suggest that both yeast and mammalian metallothioneins may play a direct role in the cellular defense against oxidative stress by functioning as antioxidants.

Analysis of ICESat Data Using Kalman Filter and Kriging to Study Height Changes in East Antarctica

NASA Technical Reports Server (NTRS)

Herring, Thomas A.

2005-01-01

We analyze ICESat derived heights collected between Feb. 03-Nov. 04 using a kriging/Kalman filtering approach to investigate height changes in East Antarctica. The model's parameters are height change to an a priori static digital height model, seasonal signal expressed as an amplitude Beta and phase Theta, and height-change rate dh/dt for each (100 km)(exp 2) block. From the Kalman filter results, dh/dt has a mean of -0.06 m/yr in the flat interior of East Antarctica. Spatially correlated pointing errors in the current data releases give uncertainties in the range 0.06 m/yr, making height change detection unreliable at this time. Our test shows that when using all available data with pointing knowledge equivalent to that of Laser 2a, height change detection with an accuracy level 0.02 m/yr can be achieved over flat terrains in East Antarctica.

Experimental Systems to Study Yeast Pexophagy.

PubMed

Yamashita, Shun-Ichi; Oku, Masahide; Sakai, Yasuyoshi; Fujiki, Yukio

2017-01-01

Peroxisome abundance is tightly regulated according to the physiological contexts, through regulations of both proliferation and degradation of the organelles. Here, we describe detailed methods to analyze processes for autophagic degradation of peroxisomes, termed pexophagy, in yeast organisms. The assay systems include a method for biochemical detection of pexophagy completion, and one for microscopic visualization of specialized membrane structures acting in pexophagy. As a model yeast organism utilized in studies of pexophagy, the methylotrophic yeast Komagataella phaffii (Pichia pastoris) is referred to in this chapter and related information on the studies with baker's yeast (Saccharomyces cerevisiae) is also included. The described techniques facilitate elucidation of molecular machineries for pexophagy and understanding of peroxisome-selective autophagic pathways.

Recent geophysical and geological research in Antarctica related to the assessment of petroleum resources and potential environmental hazards to their development

USGS Publications Warehouse

Behrendt, John C.; Splettstoesser, John F.; Dreschoff, Gisela A. M.

1990-01-01

During the 6-year negotiation of and adoption of the Convention on the Regulation of Antarctic Mineral Resources Activities on June 2, 1988, various countries have increased their attention to the possibility of exploitation of Antarctica's petroleum resources, which are covered by this treaty. However, there are no known petroleum resources in Antarctica, and scientific information is lacking to adequately assess any undiscovered resources or the possible environmental hazards to their development. Scientific research carried out in Antarctica since the International Geophysical Year (1957-1958) has provided a great deal of information on the geological framework of this ice-covered continent and its margin and has found general indications of the types of hazards that must be considered. Antarctica covers a vast area, and likely supergiant oil fields of the type to be exploited would be tiny (e.g., a few tens of kilometers across) in comparison. Any petroleum resources located in Antarctica will be found by applying the knowledge, techniques, and experience gained developing oil fields in other parts of the world and would, therefore, be other examples of general cases; in contrast, the Antarctic environment and its associated hazards must be considered unique.

[Distiller Yeasts Producing Antibacterial Peptides].

PubMed

Klyachko, E V; Morozkina, E V; Zaitchik, B Ts; Benevolensky, S V

2015-01-01

A new method of controlling lactic acid bacteria contamination was developed with the use of recombinant Saccharomyces cerevisiae strains producing antibacterial peptides. Genes encoding the antibacterial peptides pediocin and plantaricin with codons preferable for S. cerevisiae were synthesized, and a system was constructed for their secretory expression. Recombinant S. cerevisiae strains producing antibacterial peptides effectively inhibit the growth of Lactobacillus sakei, Pediacoccus pentasaceus, Pediacoccus acidilactici, etc. The application of distiller yeasts producing antibacterial peptides enhances the ethanol yield in cases of bacterial contamination. Recombinant yeasts producing the antibacterial peptides pediocin and plantaricin can successfully substitute the available industrial yeast strains upon ethanol production.

Differential Adsorption of Ochratoxin A and Anthocyanins by Inactivated Yeasts and Yeast Cell Walls during Simulation of Wine Aging

PubMed Central

Petruzzi, Leonardo; Baiano, Antonietta; De Gianni, Antonio; Sinigaglia, Milena; Corbo, Maria Rosaria; Bevilacqua, Antonio

2015-01-01

The adsorption of ochratoxin A (OTA) by yeasts is a promising approach for the decontamination of musts and wines, but some potential competitive or interactive phenomena between mycotoxin, yeast cells, and anthocyanins might modify the intensity of the phenomenon. The aim of this study was to examine OTA adsorption by two strains of Saccharomyces cerevisiae (the wild strain W13, and the commercial isolate BM45), previously inactivated by heat, and a yeast cell wall preparation. Experiments were conducted using Nero di Troia red wine contaminated with 2 μg/L OTA and supplemented with yeast biomass (20 g/L). The samples were analyzed periodically to assess mycotoxin concentration, chromatic characteristics, and total anthocyanins over 84 days of aging. Yeast cell walls revealed the highest OTA-adsorption in comparison to thermally-inactivated cells (50% vs. 43% toxin reduction), whilst no significant differences were found for the amount of adsorbed anthocyanins in OTA-contaminated and control wines. OTA and anthocyanins adsorption were not competitive phenomena. Unfortunately, the addition of yeast cells to wine could cause color loss; therefore, yeast selection should also focus on this trait to select the best strain. PMID:26516913

Made for Each Other: Ascomycete Yeasts and Insects.

PubMed

Blackwell, Meredith

2017-06-01

Fungi and insects live together in the same habitats, and many species of both groups rely on each other for success. Insects, the most successful animals on Earth, cannot produce sterols, essential vitamins, and many enzymes; fungi, often yeast-like in growth form, make up for these deficits. Fungi, however, require constantly replenished substrates because they consume the previous ones, and insects, sometimes lured by volatile fungal compounds, carry fungi directly to a similar, but fresh, habitat. Yeasts associated with insects include Ascomycota (Saccharomycotina, Pezizomycotina) and a few Basidiomycota. Beetles, homopterans, and flies are important associates of fungi, and in turn the insects carry yeasts in pits, specialized external pouches, and modified gut pockets. Some yeasts undergo sexual reproduction within the insect gut, where the genetic diversity of the population is increased, while others, well suited to their stable environment, may never mate. The range of interactions extends from dispersal of yeasts on the surface of insects (e.g., cactus- Drosophila -yeast and ephemeral flower communities, ambrosia beetles, yeasts with holdfasts) to extremely specialized associations of organisms that can no longer exist independently, as in the case of yeast-like symbionts of planthoppers. In a few cases yeast-like fungus-insect associations threaten butterflies and other species with extinction. Technical advances improve discovery and identification of the fungi but also inform our understanding of the evolution of yeast-insect symbioses, although there is much more to learn.

The growth of solar radiated yeast

NASA Technical Reports Server (NTRS)

Kraft, Tyrone

1995-01-01

This researcher plans to determine if solar radiation affects the growth of yeast. The irradiated yeast was obtained from a sample exposed in space during a Space Shuttle flight of September 9-20, 1994. Further, the control groups were held at: (1) Goddard Space Flight Center (GSFC) in Greenbelt, Maryland; and (2) South Dakota School of Mines and Technology. The procedure used was based on the fact that yeast is most often used in consumable baked goods. Therefore, the yeast was incorporated into a basic Betty Crocker bread recipe. Data was collected by placing measured amounts of dough into sample containers with fifteen minute growth in height measurements collected and recorded. This researcher assumed the viability of yeast to be relative to its ability to produce carbon dioxide gas and cause the dough to rise. As all ingredients and surroundings were equal, this researcher assumed the yeast will produce the only significant difference in data collected. This researcher noted the approximate use date on all sample packages to be prior to arrival and experiment date. All dates equal, it was then assumed each would act in a similar manner of response. This assumption will allow for equally correct data collection.

The growth of solar radiated yeast

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kraft, T.

This researcher plans to determine if solar radiation affects the growth of yeast. The irradiated yeast was obtained from a sample exposed in space during a Space Shuttle flight of September 9-20, 1994. Further, the control groups were held at: (1) Goddard Space Flight Center (GSFC) in Greenbelt, Maryland; and (2) South Dakota School of Mines and Technology. The procedure used was based on the fact that yeast is most often used in consumable baked goods. Therefore, the yeast was incorporated into a basic Betty Crocker bread recipe. Data was collected by placing measured amounts of dough into sample containersmore » with fifteen minute growth in height measurements collected and recorded. This researcher assumed the viability of yeast to be relative to its ability to produce carbon dioxide gas and cause the dough to rise. As all ingredients and surroundings were equal, this researcher assumed the yeast will produce the only significant difference in data collected. This researcher noted the approximate use date on all sample packages to be prior to arrival and experiment date. All dates equal, it was then assumed each would act in a similar manner of response. This assumption will allow for equally correct data collection.« less

Freeze-drying of yeast cultures.

PubMed

Bond, Chris

2007-01-01

A method is described that allows yeast species to be stored using a variation on the standard freeze-drying method, which employs evaporative cooling in a two-stage process. Yeast cultures are placed in glass ampoules after having been mixed with a lyoprotectant. Primary drying is carried out using a centrifuge head connected to a standard freeze-dryer. Once the centrifuge head is running, air is removed and evaporated liquid is captured in the freeze-dryer. Centrifugation continues for 15 min and primary drying for a further 3 h. The ampoules are constricted using a glass blowing torch. They are then placed on the freeze-dryer manifold for secondary drying under vacuum overnight, using phosphorus pentoxide as a desiccant. The ampoules are sealed and removed from the manifold by melting the constricted section. Although the process causes an initial large drop in viability, further losses after storage are minimal. Yeast strains have remained viable for more than 30 yr when stored using this method and sufficient cells are recovered to produce new working stocks. Although survival rates are strain specific, nearly all National Collection of Yeast Cultures strains covering most yeast genera, have been successfully stored with little or no detectable change in strain characteristics.

Does temperature structure phytoplankton community composition in the Ross Sea, Antarctica?

EPA Science Inventory

The Ross Sea polynya experiences one of the largest phytoplankton blooms in the Southern Ocean. Energy flow potential within the Ross Sea food web is primarily set by diatoms and prymnesiophytes, the latter dominated by Phaeocystis antarctica. We investigated physical, chemical,...

Biotechnology of non-Saccharomyces yeasts--the ascomycetes.

PubMed

Johnson, Eric A

2013-01-01

Saccharomyces cerevisiae and several other yeast species are among the most important groups of biotechnological organisms. S. cerevisiae and closely related ascomycetous yeasts are the major producer of biotechnology products worldwide, exceeding other groups of industrial microorganisms in productivity and economic revenues. Traditional industrial attributes of the S. cerevisiae group include their primary roles in food fermentations such as beers, cider, wines, sake, distilled spirits, bakery products, cheese, sausages, and other fermented foods. Other long-standing industrial processes involving S. cerevisae yeasts are production of fuel ethanol, single-cell protein (SCP), feeds and fodder, industrial enzymes, and small molecular weight metabolites. More recently, non-Saccharomyces yeasts (non-conventional yeasts) have been utilized as industrial organisms for a variety of biotechnological roles. Non-Saccharomyces yeasts are increasingly being used as hosts for expression of proteins, biocatalysts and multi-enzyme pathways for the synthesis of fine chemicals and small molecular weight compounds of medicinal and nutritional importance. Non-Saccharomyces yeasts also have important roles in agriculture as agents of biocontrol, bioremediation, and as indicators of environmental quality. Several of these products and processes have reached commercial utility, while others are in advanced development. The objective of this mini-review is to describe processes currently used by industry and those in developmental stages and close to commercialization primarily from non-Saccharomyces yeasts with an emphasis on new opportunities. The utility of S. cerevisiae in heterologous production of selected products is also described.

Yeast proteome map (last update).

PubMed

Perrot, Michel; Moes, Suzette; Massoni, Aurélie; Jenoe, Paul; Boucherie, Hélian

2009-10-01

The identification of proteins separated on 2-D gels is essential to exploit the full potential of 2-D gel electrophoresis for proteomic investigations. For this purpose we have undertaken the systematic identification of Saccharomyces cerevisiae proteins separated on 2-D gels. We report here the identification by mass spectrometry of 100 novel yeast protein spots that have so far not been tackled due to their scarcity on our standard 2-D gels. These identifications extend the number of protein spots identified on our yeast 2-D proteome map to 716. They correspond to 485 unique proteins. Among these, 154 were resolved into several isoforms. The present data set can now be expanded to report for the first time a map of 363 protein isoforms that significantly deepens our knowledge of the yeast proteome. The reference map and a list of all identified proteins can be accessed on the Yeast Protein Map server (www.ibgc.u-bordeaux2.fr/YPM).

Low-level precipitation sublimation on the coasts of East Antarctica

NASA Astrophysics Data System (ADS)

Grazioli, Jacopo; Genthon, Christophe; Madeleine, Jean-Baptiste; Lemonnier, Florentin; Gallée, Hubert; Krinner, Gerhard; Berne, Alexis

2017-04-01

The weather of East Antarctica is affected by the peculiar morphology of this large continent and by its isolation from the surroundings. The high-elevation interior of the continent, very dry in absolute terms, originates winds that can reach the coastal areas with very high speed and persistence in time. The absence of topographic barriers and the near-ground temperature inversion allow these density-driven air movements to fall from the continent towards the coasts without excessive interaction and mixing with the atmosphere aloft. Thus, the air remains dry in absolute terms, and very dry in relative terms because of the higher temperatures near the coast and the adiabatic warming due to the descent. The coasts of Antarctica are less isolated and more exposed to incoming moist air masses than the rest of the continent, and precipitation in the form of snowfall more frequently occurs. Through its descent, however, snowfall encounters the layer of dry air coming from the continent and the deficit in humidity can lead to the partial or complete sublimation of the precipitating flux. This phenomenon is named here LPS (Low-level Precipitation Sublimation) and it has been observed by means of ground-based remote sensing instruments (weather radars) and atmospheric radio-sounding balloons records in the framework of the APRES3 campaign (Antarctic Precipitation: REmote Sensing from Surface and Space) in the coastal base of Dumont d' Urville (Terre Adélie), and then examined at the continental scale thanks to numerical weather models. LPS occurs over most of the coastal locations, where the total sublimated snowfall can be a significant percentage of the total snowfall. For example, in Dumont d' Urville the total yearly snowfall at 341 m height is less than 80% of the snowfall at 941 m height (the height of maximum yearly accumulation), and at shorter time scales complete sublimation (i.e. virga) often occurs. At the scale of individual precipitation events, LPS is

Basal melt rates of Filchner Ice Shelf, Antarctica

NASA Astrophysics Data System (ADS)

Humbert, A.; Nicholls, K. W.; Corr, H. F. J.; Steinhage, D.; Stewart, C.; Zeising, O.

2017-12-01

Thinning of ice shelves around Antarctica has been found to be partly driven by an increase in basal melt as a result of warmer waters entering the sub-ice shelf cavity. In-situ observations of basal melt rate are, however, sparse. A new robust and efficient phase sensitive radio echo sounder (pRES) allows to measure change in ice thickness and vertical strain at high accuracy, so that the contribution of basal melt to the change in thickness can be estimated. As modeling studies suggest that the cavity beneath Filchner Ice Shelf, Antarctica, might be prone to intrusion of warm water pulses within this century, we wished to derive a baseline dataset and an understanding of its present day spatial variability. Here we present results from pRES measurements over two field seasons, 2015/16-16/17, comprising 86 datasets over the southern Filchner Ice Shelf, covering an area of about 6500km2. The maximum melt rate is only slightly more than 1m/a, but the spatial distribution exhibits a complex pattern. For the purpose of testing variability of basal melt rates on small spatial scales, we performed 26 measurements over distances of about 1km, and show that the melt rates do not vary by more than 0.25m/a.

Design of a seismo-acoustic station for Antarctica.

PubMed

Contrafatto, Danilo; Fasone, Rosario; Ferro, Angelo; Larocca, Graziano; Laudani, Giuseppe; Rapisarda, Salvatore; Scuderi, Luciano; Zuccarello, Luciano; Privitera, Eugenio; Cannata, Andrea

2018-04-01

In recent years, seismological studies in Antarctica have contributed plenty of new knowledge in many fields of earth science. Moreover, acoustic investigations are now also considered a powerful tool that provides insights for many different objectives, such as analyses of regional climate-related changes and studies of volcanic degassing and explosive activities. However, installation and maintenance of scientific instrumentation in Antarctica can be really challenging. Indeed, the instruments have to face the most extreme climate on the planet. They must be tolerant of very low temperatures and robust enough to survive strong winds. Moreover, one of the most critical tasks is powering a remote system year-round at polar latitudes. In this work, we present a novel seismo-acoustic station designed to work reliably in polar regions. To enable year-round seismo-acoustic data collection in such a remote, extreme environment, a hybrid powering system is used, integrating solar panels, a wind generator, and batteries. A power management system was specifically developed to either charge the battery bank or divert energy surplus to warm the enclosure or release the excess energy to the outside environment. Finally, due to the prohibitive environmental conditions at most Antarctic installation sites, the station was designed to be deployed quickly.

Design of a seismo-acoustic station for Antarctica

NASA Astrophysics Data System (ADS)

Contrafatto, Danilo; Fasone, Rosario; Ferro, Angelo; Larocca, Graziano; Laudani, Giuseppe; Rapisarda, Salvatore; Scuderi, Luciano; Zuccarello, Luciano; Privitera, Eugenio; Cannata, Andrea

2018-04-01

In recent years, seismological studies in Antarctica have contributed plenty of new knowledge in many fields of earth science. Moreover, acoustic investigations are now also considered a powerful tool that provides insights for many different objectives, such as analyses of regional climate-related changes and studies of volcanic degassing and explosive activities. However, installation and maintenance of scientific instrumentation in Antarctica can be really challenging. Indeed, the instruments have to face the most extreme climate on the planet. They must be tolerant of very low temperatures and robust enough to survive strong winds. Moreover, one of the most critical tasks is powering a remote system year-round at polar latitudes. In this work, we present a novel seismo-acoustic station designed to work reliably in polar regions. To enable year-round seismo-acoustic data collection in such a remote, extreme environment, a hybrid powering system is used, integrating solar panels, a wind generator, and batteries. A power management system was specifically developed to either charge the battery bank or divert energy surplus to warm the enclosure or release the excess energy to the outside environment. Finally, due to the prohibitive environmental conditions at most Antarctic installation sites, the station was designed to be deployed quickly.

Ultimate Eocene (Priabonian) Chondrichthyans (Holocephali, Elasmobranchii) of Antarctica

PubMed Central

Kriwet, Jürgen; Engelbrecht, Andrea; Mörs, Thomas; Reguero, Marcelo; Pfaff, Cathrin

2017-01-01

The Eocene La Meseta Formation on Seymour Island, Antarctic Peninsula, is known for its remarkable wealth of fossil remains of chondrichthyans and teleosts. Chondrichthyans seemingly were dominant elements in the Antarctic Paleogene fish fauna, but decreased in abundance from middle to late Eocene, during which time remains of bony fishes increase. This decline of chondrichthyans at the end of the Eocene generally is related to sudden cooling of seawater, reduction in shelf area, and increasing shelf depth due to the onset of the Antarctic thermal isolation. The last chondrichthyan records known so far include a chimeroid tooth plate from TELM 6 (Lutetian) and a single pristiophorid rostral spine from TELM 7 (Priabonian). Here, we present new chondrichthyan records of Squalus, Squatina, Pristiophorus, Striatolamia, Palaeohypotodus, Carcharocles, and Ischyodus from the upper parts of TELM 7 (Priabonian), including the first record of Carcharocles sokolovi from Antarctica. This assemblage suggests that chondrichthyans persisted much longer in Antarctic waters despite rather cool sea surface temperatures of approximately 5°C. The final disappearance of chondrichthyans at the Eocene–Oligocene boundary concurs with abrupt ice sheet formation in Antarctica. Diversity patterns of chondrichthyans throughout the La Meseta Formation appear to be related to climatic conditions rather than plate tectonics. PMID:28298806

Ultimate Eocene (Priabonian) Chondrichthyans (Holocephali, Elasmobranchii) of Antarctica.

PubMed

Kriwet, Jürgen; Engelbrecht, Andrea; Mörs, Thomas; Reguero, Marcelo; Pfaff, Cathrin

2016-01-01

The Eocene La Meseta Formation on Seymour Island, Antarctic Peninsula, is known for its remarkable wealth of fossil remains of chondrichthyans and teleosts. Chondrichthyans seemingly were dominant elements in the Antarctic Paleogene fish fauna, but decreased in abundance from middle to late Eocene, during which time remains of bony fishes increase. This decline of chondrichthyans at the end of the Eocene generally is related to sudden cooling of seawater, reduction in shelf area, and increasing shelf depth due to the onset of the Antarctic thermal isolation. The last chondrichthyan records known so far include a chimeroid tooth plate from TELM 6 (Lutetian) and a single pristiophorid rostral spine from TELM 7 (Priabonian). Here, we present new chondrichthyan records of Squalus , Squatina , Pristiophorus , Striatolamia , Palaeohypotodus , Carcharocles , and Ischyodus from the upper parts of TELM 7 (Priabonian), including the first record of Carcharocles sokolovi from Antarctica. This assemblage suggests that chondrichthyans persisted much longer in Antarctic waters despite rather cool sea surface temperatures of approximately 5°C. The final disappearance of chondrichthyans at the Eocene-Oligocene boundary concurs with abrupt ice sheet formation in Antarctica. Diversity patterns of chondrichthyans throughout the La Meseta Formation appear to be related to climatic conditions rather than plate tectonics.

Pattern of passenger injury and illness on expedition cruise ships to Antarctica.

PubMed

Schutz, Lusana; Zak, Dan; Holmes, James F

2014-01-01

Expedition ships to Antarctica travel to remote areas with limited medical support. This study determines the rate and patterns of passenger illness and injuries among those traveling on expedition ships to Antarctica. We hypothesize that severe medical conditions are encountered that require physicians serving on these ships to be skilled enough to care for critically ill or injured patients. We performed a retrospective analysis of the medical records of all passengers who were provided medical care on 26 Antarctica voyages from October 2010 to March 2011 (four different expedition ships). A structured system was used to categorize the diagnoses from each patient encounter. The pattern of traumatic injuries was noted, including location of occurrence. Treatments rendered including patient evacuations were documented. The population is described with incidence rates. A total of 2,366 passengers traveled on 26 trips, for a total of 34,501 person-days. In all, 680 physician visits were done, including 150 consultations for motion sickness preventive care, leaving 530 visits (15.4 visits per 1,000 person-days) for active medical care. Median age was 50 (range 10-90) years and 51% were females. Incidence rates per 1,000 person-days for the most common processes include motion sickness (4.2), infections (3.5), and injury (2.0). Injuries were more likely to occur on the ship (66%, 95% CI: 54-77%) compared to off the ship (34%, 95% CI: 23-46%). Four subjects (0.12/1,000 person-days) were evacuated (three due to traumatic conditions and one due to medical complications) and one person died (medical complication). Passengers on expedition ships to Antarctica may experience significant illness and injury. Ship physicians should be aware of the patterns of injuries and illnesses that occur on expedition ships and should have appropriate training to treat various medical and traumatic conditions including life-threatening illnesses. © 2014 International Society of Travel

Climate Proxies: An Inquiry-Based Approach to Discovering Climate Change on Antarctica

NASA Astrophysics Data System (ADS)

Wishart, D. N.

2016-12-01

An attractive way to advance climate literacy in higher education is to emphasize its relevance while teaching climate change across the curriculum to science majors and non-science majors. An inquiry-based pedagogical approach was used to engage five groups of students on a "Polar Discovery Project" aimed at interpreting the paleoclimate history of ice cores from Antarctica. Learning objectives and student learning outcomes were clearly defined. Students were assigned several exercises ranging from examination of Antarctic topography to the application of physical and chemical measurements as proxies for climate change. Required materials included base and topographic maps of Antarctica; graph sheets for construction of topographic cross-sectional profiles from profile lines of the Western Antarctica Ice Sheet (WAIS) Divide and East Antarctica; high-resolution photographs of Antarctic ice cores; stratigraphic columns of ice cores; borehole and glaciochemical data (i.e. anions, actions, δ18O, δD etc.); and isotope data on greenhouse gases (CH4, O2, N2) extracted from gas bubbles in ice cores. The methodology was to engage students in (2) construction of topographic profiles; (2) suggest directions for ice flow based on simple physics; (3) formulate decisions on suitable locations for drilling ice cores; (4) visual ice stratigraphy including ice layer counting; (5) observation of any insoluble particles (i.e. meteoritic and volcanic material); (6) analysis of borehole temperature profiles; and (7) the interpretation of several datasets to derive a paleoclimate history of these areas of the continent. The overall goal of the project was to improve the students analytical and quantitative skills; their ability to evaluate relationships between physical and chemical properties in ice cores, and to advance the understanding the impending consequences of climate change while engaging science, technology, engineering and mathematics (STEM). Student learning outcomes

Septin Organization and Functions in Budding Yeast

PubMed Central

Glomb, Oliver; Gronemeyer, Thomas

2016-01-01

The septins are a conserved family of GTP-binding proteins present in all eukaryotic cells except plants. They were originally discovered in the baker's yeast Saccharomyces cerevisiae that serves until today as an important model organism for septin research. In yeast, the septins assemble into a highly ordered array of filaments at the mother bud neck. The septins are regulators of spatial compartmentalization in yeast and act as key players in cytokinesis. This minireview summarizes the recent findings about structural features and cell biology of the yeast septins. PMID:27857941

Atmospheric Boundary Layer Dynamics Near Ross Island and Over West Antarctica.

NASA Astrophysics Data System (ADS)

Liu, Zhong

The atmospheric boundary layer dynamics near Ross Island and over West Antarctica has been investigated. The study consists of two parts. The first part involved the use of data from ground-based remote sensing equipment (sodar and RASS), radiosondes, pilot balloons, automatic weather stations, and NOAA AVHRR satellite imagery. The second part involved the use of a high resolution boundary layer model coupled with a three-dimensional primitive equation mesoscale model to simulate the observed atmospheric boundary layer winds and temperatures. Turbulence parameters were simulated with an E-epsilon turbulence model driven by observed winds and temperatures. The observational analysis, for the first time, revealed that the airflow passing through the Ross Island area is supplied mainly by enhanced katabatic drainage from Byrd Glacier and secondarily drainage from Mulock and Skelton glaciers. The observed diurnal variation of the blocking effect near Ross Island is dominated by the changes in the upstream katabatic airflow. The synthesized analysis over West Antarctica found that the Siple Coast katabatic wind confluence zone consists of two superimposed katabatic airflows: a relatively warm and more buoyant katabatic flow from West Antarctica overlies a colder and less buoyant katabatic airflow from East Antarctica. The force balance analysis revealed that, inside the West Antarctic katabatic wind zone, the pressure gradient force associated with the blocked airflow against the Transantarctic Mountains dominates; inside the East Antarctic katabatic wind zone, the downslope buoyancy force due to the cold air overlying the sloping terrain is dominant. The analysis also shows that these forces are in geostrophic balance with the Coriolis force. An E-epsilon turbulence closure model is used to simulate the diurnal variation of sodar backscatter. The results show that the model is capable of qualitatively capturing the main features of the observed sodar backscatter. To

Taming wild yeast: potential of conventional and nonconventional yeasts in industrial fermentations.

PubMed

Steensels, Jan; Verstrepen, Kevin J

2014-01-01

Yeasts are the main driving force behind several industrial food fermentation processes, including the production of beer, wine, sake, bread, and chocolate. Historically, these processes developed from uncontrolled, spontaneous fermentation reactions that rely on a complex mixture of microbes present in the environment. Because such spontaneous processes are generally inconsistent and inefficient and often lead to the formation of off-flavors, most of today's industrial production utilizes defined starter cultures, often consisting of a specific domesticated strain of Saccharomyces cerevisiae, S. bayanus, or S. pastorianus. Although this practice greatly improved process consistency, efficiency, and overall quality, it also limited the sensorial complexity of the end product. In this review, we discuss how Saccharomyces yeasts were domesticated to become the main workhorse of food fermentations, and we investigate the potential and selection of nonconventional yeasts that are often found in spontaneous fermentations, such as Brettanomyces, Hanseniaspora, and Pichia spp.

Yeast: A Research Organism for Teaching Genetics.

ERIC Educational Resources Information Center

Manney, Thomas R.; Manney, Monta L.

1992-01-01

Explains why laboratory strains of bakers yeast, Saccharomyces cerevisiae, are particularly suited for classroom science activities. Describes the sexual life cycle of yeast and the genetic system with visible mutations. Presents an overview of activities that can be done with yeast and gives a source for teachers to obtain more information. (PR)

Meteorites and Microbes: Meteorite Collection and Ice Sampling at Patriot Hills, Thiel Mountains, and South Pole, Antarctica

NASA Technical Reports Server (NTRS)

Sipiera, Paul P.; Hoover, Richard B.; Rose, M. Franklin (Technical Monitor)

2000-01-01

During the Antarctica 2000 Expedition, sponsored by the Planetary Studies Foundation, meteorites and ice microbiota were collected from the Patriot Hills, and Thiel Mountains of Antarctica and snow samples were at the South Pole. Psychrophilic and psychrotrophic microbiota were obtained from blue ice, cryoconite and ice-bubble systems. Twenty frozen meteorites were collected using aseptic techniques from the blue ice fields near the Moulton Escarpment of the Thiel Mountains (85 S, 94 W) and from the Morris Moraine of the Patriot Hills (80 S, 81 W) Ellsworth Mountains. These ice and meteorite samples are of potential significance to Astrobiology. They may help refine chemical and morphological biomarkers and refine characteristics of microbial life in one of the harshest environments on Earth. We discuss the Antarctica 2000 Expedition and provide preliminary results of the investigation of the meteorites and ice microbiota recovered.

Introducing a new breed of wine yeast: interspecific hybridisation between a commercial Saccharomyces cerevisiae wine yeast and Saccharomyces mikatae.

PubMed

Bellon, Jennifer R; Schmid, Frank; Capone, Dimitra L; Dunn, Barbara L; Chambers, Paul J

2013-01-01

Interspecific hybrids are commonplace in agriculture and horticulture; bread wheat and grapefruit are but two examples. The benefits derived from interspecific hybridisation include the potential of generating advantageous transgressive phenotypes. This paper describes the generation of a new breed of wine yeast by interspecific hybridisation between a commercial Saccharomyces cerevisiae wine yeast strain and Saccharomyces mikatae, a species hitherto not associated with industrial fermentation environs. While commercially available wine yeast strains provide consistent and reliable fermentations, wines produced using single inocula are thought to lack the sensory complexity and rounded palate structure obtained from spontaneous fermentations. In contrast, interspecific yeast hybrids have the potential to deliver increased complexity to wine sensory properties and alternative wine styles through the formation of novel, and wider ranging, yeast volatile fermentation metabolite profiles, whilst maintaining the robustness of the wine yeast parent. Screening of newly generated hybrids from a cross between a S. cerevisiae wine yeast and S. mikatae (closely-related but ecologically distant members of the Saccharomyces sensu stricto clade), has identified progeny with robust fermentation properties and winemaking potential. Chemical analysis showed that, relative to the S. cerevisiae wine yeast parent, hybrids produced wines with different concentrations of volatile metabolites that are known to contribute to wine flavour and aroma, including flavour compounds associated with non-Saccharomyces species. The new S. cerevisiae x S. mikatae hybrids have the potential to produce complex wines akin to products of spontaneous fermentation while giving winemakers the safeguard of an inoculated ferment.

Phylogeography of microbial phototrophs in the dry valleys of the high Himalayas and Antarctica.

PubMed

Schmidt, S K; Lynch, R C; King, A J; Karki, D; Robeson, M S; Nagy, L; Williams, M W; Mitter, M S; Freeman, K R

2011-03-07

High-elevation valleys in dry areas of the Himalayas are among the most extreme, yet least explored environments on Earth. These barren, rocky valleys are subjected to year-round temperature fluctuations across the freezing point and very low availability of water and nutrients, causing previous workers to hypothesize that no photoautotrophic life (primary producers) exists in these locations. However, there has been no work using modern biogeochemical or culture-independent molecular methods to test the hypothesis that photoautotrophs are absent from high Himalayan soil systems. Here, we show that although microbial biomass levels are as low as those of the Dry Valleys of Antarctica, there are abundant microbial photoautotrophs, displaying unexpected phylogenetic diversity, in barren soils from just below the permanent ice line of the central Himalayas. Furthermore, we discovered that one of the dominant algal clades from the high Himalayas also contains the dominant algae in culture-independent surveys of both soil and ice samples from the Dry Valleys of Antarctica, revealing an unexpected link between these environmentally similar but geographically very distant systems. Phylogenetic and biogeographic analyses demonstrated that although this algal clade is globally distributed to other high-altitude and high-latitude soils, it shows significant genetic isolation by geographical distance patterns, indicating local adaptation and perhaps speciation in each region. Our results are the first to demonstrate the remarkable similarities of microbial life of arid soils of Antarctica and the high Himalayas. Our findings are a starting point for future comparative studies of the dry valleys of the Himalayas and Antarctica that will yield new insights into the cold and dry limits to life on Earth.

An Evaluation of Antarctica as a Calibration Target for Passive Microwave Satellite Missions with Climate Data Record Applications

NASA Technical Reports Server (NTRS)

Kim, Edward

2011-01-01

Passive microwave remote sensing at L-band (1.4 GHz) is sensitive to soil moisture and sea surface salinity, both important climate variables. Science studies involving these variables can now take advantage of new satellite L-band observations. The first mission with regular global passive microwave observations at L-band is the European Space Agency's Soil Moisture and Ocean Salinity (SMOS), launched November, 2009. A second mission, NASA's Aquarius, was launched June, 201 I. A third mission, NASA's Soil Moisture Active Passive (SMAP) is scheduled to launch in 2014. Together, these three missions may provide a decade-long data record-provided that they are intercalibrated. The intercalibration is best performed at the radiance (brightness temperature) level, and Antarctica is proving to be a key calibration target. However, Antarctica has thus far not been fully characterized as a potential target. This paper will present evaluations of Antarctica as a microwave calibration target for the above satellite missions. Preliminary analyses have identified likely target areas, such as the vicinity of Dome-C and larger areas within East Antarctica. Physical sources of temporal and spatial variability of polar firn are key to assessing calibration uncertainty. These sources include spatial variability of accumulation rate, compaction, surface characteristics (dunes, micro-topography), wind patterns, and vertical profiles of density and temperature. Using primarily SMOS data, variability is being empirically characterized and attempts are being made to attribute observed variability to physical sources. One expected outcome of these studies is the potential discovery of techniques for remotely sensing--over all of Antarctica-parameters such as surface temperature.

Yeast fuel cell: Application for desalination

NASA Astrophysics Data System (ADS)

Mardiana, Ummy; Innocent, Christophe; Cretin, Marc; Buchari, Buchari; Gandasasmita, Suryo

2016-02-01

Yeasts have been implicated in microbial fuel cells as biocatalysts because they are non-pathogenic organisms, easily handled and robust with a good tolerance in different environmental conditions. Here we investigated baker's yeast Saccharomyces cerevisiae through the oxidation of glucose. Yeast was used in the anolyte, to transfer electrons to the anode in the presence of methylene blue as mediator whereas K3Fe(CN)6 was used as an electron acceptor for the reduction reaction in the catholyte. Power production with biofuel cell was coupled with a desalination process. The maximum current density produced by the cell was 88 mA.m-2. In those conditions, it was found that concentration of salt was removed 64% from initial 0.6 M after 1-month operation. This result proves that yeast fuel cells can be used to remove salt through electrically driven membrane processes and demonstrated that could be applied for energy production and desalination. Further developments are in progress to improve power output to make yeast fuel cells applicable for water treatment.

Yeasts for Global Happiness: report of the 14th International Congress on Yeasts (ICY14) held in Awaji Island.

PubMed

Watanabe, Daisuke; Takagi, Hiroshi

2017-02-01

The 14th International Congress on Yeasts (ICY14) was held at Awaji Yumebutai International Conference Center (Awaji, Hyogo) in Japan from 11 to 15 September 2016. The main slogan of ICY14 was 'Yeasts for Global Happiness', which enabled us to acknowledge the high-potential usefulness of yeasts contributing to the global happiness in terms of food/beverage, health/medicine and energy/environment industries, as well as to basic biosciences. In addition, two more concepts were introduced: 'from Japan to the world' and 'from senior to junior'. As it was the first ICY meeting held in Japan or other Asian countries, ICY14 provided a good opportunity to widely spread the great achievements by Japanese and Asian yeast researchers, such as those by the 2016 Nobel Laureate Dr. Yoshinori Ohsumi, and also, to convey the fun and importance of yeasts to the next generation of researchers from Asia and all over the world. As a result, a total of 426 yeast lovers from 42 countries (225 overseas and 201 domestic participants) with different generations attended ICY14 to share the latest knowledge of a wide range of yeast research fields and to join active and constructive scientific discussions. © 2017 Molecular Biology Society of Japan and John Wiley & Sons Australia, Ltd.

Microbial taxonomic diversity and adaptation mechanisms in lithic ecosystems of the northern Victoria Land, Antarctica

NASA Astrophysics Data System (ADS)

Kim, O. S.; Lee, J.; Cho, J. H.; Kwon, M.; Cho, A.; Kim, M.; Woo, J.; Hong, S. G.; Lee, J.

2016-12-01

Rock is one of the best habitat for microorganisms in Antarctica, providing the good condition to avoid strong sunlight and wind. Furthermore, geochemistry in rock can provide as nutrients for microorganisms. Barren rock can be considered as an ecosystem by fouling, which is defined as the settlement of organisms and their growth. These life forms have the specialized mechanism to adapt the harsh environmental conditions such as a below subzero temperature, a unique annual light/dark cycle, wind chill and limited water availability and nutrient supply. However, little is known about the microbial communities and their adaptation mechanisms in this harsh environments. In this study, we focus on the microbial ecology in order to understand what kind of microorganisms are present based on culture-dependent and -independent methods collected barren rock samples from the northern Victoria Land, Antarctica. Additionally, we present the complete genome sequence of Cryobacterium arcticum PAMC 27867, one of the isolates from these rock samples, in order to understand the microbial adaptation strategies in lithic ecosystems, Antarctica.

The secretory pathway: exploring yeast diversity.

PubMed

Delic, Marizela; Valli, Minoska; Graf, Alexandra B; Pfeffer, Martin; Mattanovich, Diethard; Gasser, Brigitte

2013-11-01

Protein secretion is an essential process for living organisms. In eukaryotes, this encompasses numerous steps mediated by several hundred cellular proteins. The core functions of translocation through the endoplasmic reticulum membrane, primary glycosylation, folding and quality control, and vesicle-mediated secretion are similar from yeasts to higher eukaryotes. However, recent research has revealed significant functional differences between yeasts and mammalian cells, and even among diverse yeast species. This review provides a current overview of the canonical protein secretion pathway in the model yeast Saccharomyces cerevisiae, highlighting differences to mammalian cells as well as currently unresolved questions, and provides a genomic comparison of the S. cerevisiae pathway to seven other yeast species where secretion has been investigated due to their attraction as protein production platforms, or for their relevance as pathogens. The analysis of Candida albicans, Candida glabrata, Kluyveromyces lactis, Pichia pastoris, Hansenula polymorpha, Yarrowia lipolytica, and Schizosaccharomyces pombe reveals that many - but not all - secretion steps are more redundant in S. cerevisiae due to duplicated genes, while some processes are even absent in this model yeast. Recent research obviates that even where homologous genes are present, small differences in protein sequence and/or differences in the regulation of gene expression may lead to quite different protein secretion phenotypes. © 2013 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

Yeasts are essential for cocoa bean fermentation.

PubMed

Ho, Van Thi Thuy; Zhao, Jian; Fleet, Graham

2014-03-17

Cocoa beans (Theobroma cacao) are the major raw material for chocolate production and fermentation of the beans is essential for the development of chocolate flavor precursors. In this study, a novel approach was used to determine the role of yeasts in cocoa fermentation and their contribution to chocolate quality. Cocoa bean fermentations were conducted with the addition of 200ppm Natamycin to inhibit the growth of yeasts, and the resultant microbial ecology and metabolism, bean chemistry and chocolate quality were compared with those of normal (control) fermentations. The yeasts Hanseniaspora guilliermondii, Pichia kudriavzevii and Kluyveromyces marxianus, the lactic acid bacteria Lactobacillus plantarum and Lactobacillus fermentum and the acetic acid bacteria Acetobacter pasteurianus and Gluconobacter frateurii were the major species found in the control fermentation. In fermentations with the presence of Natamycin, the same bacterial species grew but yeast growth was inhibited. Physical and chemical analyses showed that beans fermented without yeasts had increased shell content, lower production of ethanol, higher alcohols and esters throughout fermentation and lesser presence of pyrazines in the roasted product. Quality tests revealed that beans fermented without yeasts were purplish-violet in color and not fully brown, and chocolate prepared from these beans tasted more acid and lacked characteristic chocolate flavor. Beans fermented with yeast growth were fully brown in color and gave chocolate with typical characters which were clearly preferred by sensory panels. Our findings demonstrate that yeast growth and activity were essential for cocoa bean fermentation and the development of chocolate characteristics. Crown Copyright © 2014. Published by Elsevier B.V. All rights reserved.

Yeast Genetics and Biotechnological Applications

NASA Astrophysics Data System (ADS)

Mishra, Saroj; Baranwal, Richa

Yeast can be recognized as one of the very important groups of microorganisms on account of its extensive use in the fermentation industry and as a basic eukaryotic model cellular system. The yeast Saccharomyces cerevisiae has been extensively used to elucidate the genetics and regulation of several key functions in the cell such as cell mating, electron transport chain, protein trafficking, cell cycle events and others. Even before the genome sequence of the yeast was out, the structural organization and function of several of its genes was known. With the availability of the origin of replication from the 2 μm plasmid and the development of transformation system, it became the host of choice for expression of a number of important proteins. A large number of episomal and integrative shuttle vectors are available for expression of mammalian proteins. The latest developments in genomics and micro-array technology have allowed investigations of individual gene function by site-specific deletion method. The application of metabolic profiling has also assisted in understanding the cellular network operating in this yeast. This chapter is aimed at reviewing the use of this system as an experimental tool for conducting classical genetics. Various vector systems available, foreign genes expressed and the limitations as a host will be discussed. Finally, the use of various yeast enzymes in biotechnology sector will be reviewed.

Cenozoic motion between East and West Antarctica

PubMed

Cande; Stock; Muller; Ishihara

2000-03-09

The West Antarctic rift system is the result of late Mesozoic and Cenozoic extension between East and West Antarctica, and represents one of the largest active continental rift systems on Earth. But the timing and magnitude of the plate motions leading to the development of this rift system remain poorly known, because of a lack of magnetic anomaly and fracture zone constraints on seafloor spreading. Here we report on magnetic data, gravity data and swath bathymetry collected in several areas of the south Tasman Sea and northern Ross Sea. These results enable us to calculate mid-Cenozoic rotation parameters for East and West Antarctica. These rotations show that there was roughly 180 km of separation in the western Ross Sea embayment in Eocene and Oligocene time. This episode of extension provides a tectonic setting for several significant Cenozoic tectonic events in the Ross Sea embayment including the uplift of the Transantarctic Mountains and the deposition of large thicknesses of Oligocene sediments. Inclusion of this East-West Antarctic motion in the plate circuit linking the Australia, Antarctic and Pacific plates removes a puzzling gap between the Lord Howe rise and Campbell plateau found in previous early Tertiary reconstructions of the New Zealand region. Determination of this East-West Antarctic motion also resolves a long standing controversy regarding the contribution of deformation in this region to the global plate circuit linking the Pacific to the rest of the world.

Functional adaptation between yeast actin and its cognate myosin motors.

PubMed

Stark, Benjamin C; Wen, Kuo-Kuang; Allingham, John S; Rubenstein, Peter A; Lord, Matthew

2011-09-02

We employed budding yeast and skeletal muscle actin to examine the contribution of the actin isoform to myosin motor function. While yeast and muscle actin are highly homologous, they exhibit different charge density at their N termini (a proposed myosin-binding interface). Muscle myosin-II actin-activated ATPase activity is significantly higher with muscle versus yeast actin. Whether this reflects inefficiency in the ability of yeast actin to activate myosin is not known. Here we optimized the isolation of two yeast myosins to assess actin function in a homogenous system. Yeast myosin-II (Myo1p) and myosin-V (Myo2p) accommodate the reduced N-terminal charge density of yeast actin, showing greater activity with yeast over muscle actin. Increasing the number of negative charges at the N terminus of yeast actin from two to four (as in muscle) had little effect on yeast myosin activity, while other substitutions of charged residues at the myosin interface of yeast actin reduced activity. Thus, yeast actin functions most effectively with its native myosins, which in part relies on associations mediated by its outer domain. Compared with yeast myosin-II and myosin-V, muscle myosin-II activity was very sensitive to salt. Collectively, our findings suggest differing degrees of reliance on electrostatic interactions during weak actomyosin binding in yeast versus muscle. Our study also highlights the importance of native actin isoforms when considering the function of myosins.

Deglacial temperature history of West Antarctica

NASA Astrophysics Data System (ADS)

Cuffey, Kurt M.; Clow, Gary D.; Steig, Eric J.; Buizert, Christo; Fudge, T. J.; Koutnik, Michelle; Waddington, Edwin D.; Alley, Richard B.; Severinghaus, Jeffrey P.

2016-12-01

The most recent glacial to interglacial transition constitutes a remarkable natural experiment for learning how Earth’s climate responds to various forcings, including a rise in atmospheric CO2. This transition has left a direct thermal remnant in the polar ice sheets, where the exceptional purity and continual accumulation of ice permit analyses not possible in other settings. For Antarctica, the deglacial warming has previously been constrained only by the water isotopic composition in ice cores, without an absolute thermometric assessment of the isotopes’ sensitivity to temperature. To overcome this limitation, we measured temperatures in a deep borehole and analyzed them together with ice-core data to reconstruct the surface temperature history of West Antarctica. The deglacial warming was 11.3±1.8∘11.3±1.8∘C, approximately two to three times the global average, in agreement with theoretical expectations for Antarctic amplification of planetary temperature changes. Consistent with evidence from glacier retreat in Southern Hemisphere mountain ranges, the Antarctic warming was mostly completed by 15 kyBP, several millennia earlier than in the Northern Hemisphere. These results constrain the role of variable oceanic heat transport between hemispheres during deglaciation and quantitatively bound the direct influence of global climate forcings on Antarctic temperature. Although climate models perform well on average in this context, some recent syntheses of deglacial climate history have underestimated Antarctic warming and the models with lowest sensitivity can be discounted.

Genomic Evolution of the Ascomycete Yeasts

DOE Office of Scientific and Technical Information (OSTI.GOV)

Riley, Robert; Haridas, Sajeet; Salamov, Asaf

2015-03-16

Yeasts are important for industrial and biotechnological processes and show remarkable metabolic and phylogenetic diversity despite morphological similarities. We have sequenced the genomes of 16 ascomycete yeasts of taxonomic and industrial importance including members of Saccharomycotina and Taphrinomycotina. Phylogenetic analysis of these and previously published yeast genomes helped resolve the placement of species including Saitoella complicata, Babjeviella inositovora, Hyphopichia burtonii, and Metschnikowia bicuspidata. Moreover, we find that alternative nuclear codon usage, where CUG encodes serine instead of leucine, are monophyletic within the Saccharomycotina. Most of the yeasts have compact genomes with a large fraction of single exon genes, and amore » tendency towards more introns in early-diverging species. Analysis of enzyme phylogeny gives insights into the evolution of metabolic capabilities such as methanol utilization and assimilation of alternative carbon sources.« less

Specialist nectar-yeasts decline with urbanization in Berlin

NASA Astrophysics Data System (ADS)

Wehner, Jeannine; Mittelbach, Moritz; Rillig, Matthias C.; Verbruggen, Erik

2017-03-01

Nectar yeasts are common inhabitants of insect-pollinated flowers but factors determining their distribution are not well understood. We studied the influence of host identity, environmental factors related to pollution/urbanization, and the distance to a target beehive on local distribution of nectar yeasts within Robinia pseudoacacia L. and Tilia tomentosa Moench in Berlin, Germany. Nectar samples of six individuals per species were collected at seven sites in a 2 km radius from each target beehive and plated on YM-Agar to visualise the different morphotypes, which were then identified by sequencing a section of the 26S rDNA gene. Multivariate linear models were used to analyze the effects of all investigated factors on yeast occurrence per tree. Yeast distribution was mainly driven by host identity. The influence of the environmental factors (NO2, height of construction, soil sealing) strongly depended on the radius around the tree, similar to the distance of the sampled beehive. Incidence of specialist nectar-borne yeast species decreased with increasing pollution/urbanization index. Given that specialist yeast species gave way to generalist yeasts that have a reduced dependency on pollinators for between-flower dispersal, our results indicate that increased urbanization may restrict the movement of nectar-specialized yeasts, via limitations of pollinator foraging behavior.

Accumulation and metabolism of selenium by yeast cells.

PubMed

Kieliszek, Marek; Błażejak, Stanisław; Gientka, Iwona; Bzducha-Wróbel, Anna

2015-07-01

This paper examines the process of selenium bioaccumulation and selenium metabolism in yeast cells. Yeast cells can bind elements in ionic from the environment and permanently integrate them into their cellular structure. Up to now, Saccharomyces cerevisiae, Candida utilis, and Yarrowia lipolytica yeasts have been used primarily in biotechnological studies to evaluate binding of minerals. Yeast cells are able to bind selenium in the form of both organic and inorganic compounds. The process of bioaccumulation of selenium by microorganisms occurs through two mechanisms: extracellular binding by ligands of membrane assembly and intracellular accumulation associated with the transport of ions across the cytoplasmic membrane into the cell interior. During intracellular metabolism of selenium, oxidation, reduction, methylation, and selenoprotein synthesis processes are involved, as exemplified by detoxification processes that allow yeasts to survive under culture conditions involving the elevated selenium concentrations which were observed. Selenium yeasts represent probably the best absorbed form of this element. In turn, in terms of wide application, the inclusion of yeast with accumulated selenium may aid in lessening selenium deficiency in a diet.

Introducing a New Breed of Wine Yeast: Interspecific Hybridisation between a Commercial Saccharomyces cerevisiae Wine Yeast and Saccharomyces mikatae

PubMed Central

Bellon, Jennifer R.; Schmid, Frank; Capone, Dimitra L.; Dunn, Barbara L.; Chambers, Paul J.

2013-01-01

Interspecific hybrids are commonplace in agriculture and horticulture; bread wheat and grapefruit are but two examples. The benefits derived from interspecific hybridisation include the potential of generating advantageous transgressive phenotypes. This paper describes the generation of a new breed of wine yeast by interspecific hybridisation between a commercial Saccharomyces cerevisiae wine yeast strain and Saccharomyces mikatae, a species hitherto not associated with industrial fermentation environs. While commercially available wine yeast strains provide consistent and reliable fermentations, wines produced using single inocula are thought to lack the sensory complexity and rounded palate structure obtained from spontaneous fermentations. In contrast, interspecific yeast hybrids have the potential to deliver increased complexity to wine sensory properties and alternative wine styles through the formation of novel, and wider ranging, yeast volatile fermentation metabolite profiles, whilst maintaining the robustness of the wine yeast parent. Screening of newly generated hybrids from a cross between a S. cerevisiae wine yeast and S. mikatae (closely-related but ecologically distant members of the Saccharomyces sensu stricto clade), has identified progeny with robust fermentation properties and winemaking potential. Chemical analysis showed that, relative to the S. cerevisiae wine yeast parent, hybrids produced wines with different concentrations of volatile metabolites that are known to contribute to wine flavour and aroma, including flavour compounds associated with non-Saccharomyces species. The new S. cerevisiae x S. mikatae hybrids have the potential to produce complex wines akin to products of spontaneous fermentation while giving winemakers the safeguard of an inoculated ferment. PMID:23614011

Paleomagnetic study of the northern Ford Ranges, western Marie Byrd Land, West Antarctica: Motion between West and East Antarctica

USGS Publications Warehouse

Luyendyk, B.; Cisowski, S.; Smith, C.; Richard, S.; Kimbrough, D.

1996-01-01

A paleomagnetic study of Paleozoic and Mesozoic crystalline rocks in the northern Ford Ranges of Marie Byrd Land, West Antarctica, has determined a middle Cretaceous (circa 100 Ma) paleomagnetic pole and provided constraints on possible clockwise rotation of these ranges and on the rifting of east Gondwana. The 40Ar/39Ar thermochronology data from the Fosdick Mountains record a period of rapid cooling from ???700??C beginning at ???100 Ma. We relate this to extension, intrusion, and uplift associated with the beginning of rifting between Campbell Plateau and Marie Byrd Land. All rocks from the Fosdick and Chester Mountains are normally polarized. We interpret thermochronology and paleomagnetic data to infer that the region was extensively remagnetized in middle Cretaceous time. Inclinations in samples from the Chester Mountains are less steep than those from the Fosdick Mountains, which we interpret as ???25?? of south tilting of the Chesters. We interpret cooling age data for the time of magnetization to infer that the tilting began after 105 Ma and ended prior to 103 Ma. We further interpret this as constraining the beginning of extension between the Campbell Plateau and western Marie Byrd Land to the interval 105 to 103 Ma. Virtual geomagnetic poles from samples of Early Carboniferous age granodiorite from the western Phillips Mountains lie on the late Paleozoic apparent polar wander path for Australia transferred to Antarctica. Directions from 29 sites in the central and eastern Phillips and Fosdick Mountains give a Middle Cretaceous paleomagnetic pole at 222.3?? E, 70.5?? S (A95 6.1??, KAPPA 20.0). This pole is indistinguishable from other Middle Cretaceous poles for studies further east in Marie Byrd Land. Combining middle Cretaceous poles determined for three other studies of the Antarctic Peninsula. Thurston Island, and the Ruppert-Hobbs coasts with ours gives a Pacific West Antarctic pole at 215.2?? E, 73.5?? S (A95 4.0??, KAPPA 528.9). This pole is

Yeast Can Affect Behavior and Learning.

ERIC Educational Resources Information Center

Crook, William G.

1984-01-01

A pediatrician recounts his experiences in diagnosing and treating allergies to common yeast germs that may result in behavior and learning problems. He lists characteristics that may predispose children to yeast-connected health problems. (CL)

Chemical signaling and insect attraction is a conserved trait in yeasts.

PubMed

Becher, Paul G; Hagman, Arne; Verschut, Vasiliki; Chakraborty, Amrita; Rozpędowska, Elżbieta; Lebreton, Sébastien; Bengtsson, Marie; Flick, Gerhard; Witzgall, Peter; Piškur, Jure

2018-03-01

Yeast volatiles attract insects, which apparently is of mutual benefit, for both yeasts and insects. However, it is unknown whether biosynthesis of metabolites that attract insects is a basic and general trait, or if it is specific for yeasts that live in close association with insects. Our goal was to study chemical insect attractants produced by yeasts that span more than 250 million years of evolutionary history and vastly differ in their metabolism and lifestyle. We bioassayed attraction of the vinegar fly Drosophila melanogaster to odors of phylogenetically and ecologically distinct yeasts grown under controlled conditions. Baker's yeast Saccharomyces cerevisiae , the insect-associated species Candida californica , Pichia kluyveri and Metschnikowia andauensis , wine yeast Dekkera bruxellensis , milk yeast Kluyveromyces lactis , the vertebrate pathogens Candida albicans and Candida glabrata , and oleophilic Yarrowia lipolytica were screened for fly attraction in a wind tunnel. Yeast headspace was chemically analyzed, and co-occurrence of insect attractants in yeasts and flowering plants was investigated through a database search. In yeasts with known genomes, we investigated the occurrence of genes involved in the synthesis of key aroma compounds. Flies were attracted to all nine yeasts studied. The behavioral response to baker's yeast was independent of its growth stage. In addition to Drosophila , we tested the basal hexapod Folsomia candida (Collembola) in a Y-tube assay to the most ancient yeast, Y. lipolytica, which proved that early yeast signals also function on clades older than neopteran insects. Behavioral and chemical data and a search for selected genes of volatile metabolites underline that biosynthesis of chemical signals is found throughout the yeast clade and has been conserved during the evolution of yeast lifestyles. Literature and database reviews corroborate that yeast signals mediate mutualistic interactions between insects and yeasts

Antarctica and Global Environmental Change - Lessons from the Past Inform Climate Change Policy Today

NASA Astrophysics Data System (ADS)

Dunbar, R. B.; Scientific Team Of Odp Drilling Leg 318; Andrill Science Team

2011-12-01

Antarctic's continental ice, sea ice, and the broader Southern Ocean form a coupled and complex climate system that interacts in important yet poorly understood ways with the low and mid-latitudes. Because of its unusual sovereignty status and the fact that there is no indigenous human population, information about climate change in Antarctica penetrates the policy world less readily than findings from other regions. Yet, Antarctica's potential to impact climate change globally is disproportionately large. Vulnerable portions of the ice sheet may contribute up to 3 to 5 meters of sea level rise in the coming centuries, including significant amounts within the next 50 years. Loss of sea ice and other changes in the Southern Ocean may reduce oceanic uptake of excess atmospheric carbon dioxide, exacerbating global warming worldwide. Antarctica's impact on the Southern Hemisphere wind field is now well-established, contributing to ongoing decadal-scale perturbations in continental precipitation as well as major reorganizations of Southern Ocean food chains. Recent scientific drilling programs in the Ross Sea and off Wilkes Land, Antarctica, provide valuable insights into past climatic and biogeochemical change in Antarctica, insights of great relevance to international and national climate change policy. In this paper, we discuss polar amplification, sea level variability coupled to Antarctic ice volume, and response timescales as seen through the lens of past climate change. One key result emerging from multiple drilling programs is recognition of unanticipated dynamism in the Antarctic ice sheet during portions of the Pliocene (at a time with pCO2 levels equivalent to those anticipated late this century) as well as during "super-interglacials" of the Pleistocene. Evidence for substantially warmer ocean temperatures and reduced sea ice cover at these times suggests that polar amplification of natural climate variability, even under scenarios of relative small amounts

Coastal-change and glaciological map of the Bakutis Coast, Antarctica

USGS Publications Warehouse

Swithinbank, Charles; Williams, Richard S.; Ferrigno, Jane G.; Seekins, B.A.; Lucchita, B.K.; Rosanova, Christine E.

1997-01-01

Changes in the area and volume of the polar ice sheets are intricately linked to changes in global climate, and the resulting changes in sea level may severely impact the densely populated coastal regions on Earth. Loss of the West Antarctic part of the Antarctic ice sheet alone could cause a sea-level rise of approximately 6 m. The potential sea-level rise after melting of the entire Antarctic ice sheet is estimated to be 65 m to 73 m. In spite of its importance, the mass balance (the net volumetric gain or loss) of the Antarctic ice sheet is poorly known; it is not known whether the ice sheet is growing or shrinking. As a result, measurement of changes in the Antarctic ice sheet was given a very high priority in recommendations by the Polar Research Board of the National Research Council (1986), by the Scientific Committee on Antarctic Research (SCAR) (1989), and by the National Science Foundation's (1990) Division of Polar Programs. An archive of early 1970's Landsat 1, 2, and 3 Multispectral Scanner (MSS) images of Antarctica and the fact that the repeat coverage with satellite images provided an excellent means of documenting changes in the coastline of Antarctica provided the impetus for carrying out a comprehensive analysis of the glaciological features of the coastal regions and changes in ice fronts of Antarctica. The project was later modified to include Landsat 4 and 5 MSS and Thematic Mapper (TM) and RADARSAT images to compare changes over a 20- to 25- year time interval and to prepare a series of 24 1:1,000,000-scale and 1 1:5,000,000-scale U.S. Geological Survey Geologic Investigations Series Maps ('I-Maps') (Williams and others, 1995; Williams and Ferrigno, 1998; and Ferrigno and others, 2002) in both paper and digital format.

The 1994 EUROMET collection of micrometeorites at Cap-Prudhomme, Antarctica

NASA Astrophysics Data System (ADS)

Maurette, M.; Immel, G.; Engrand, C.; Kurat, G.; Pillinger, C. T.

1994-07-01

Advance funding from IFRTP (Institut Francais pour la Recherche et pour la Technique Polaire) for micrometeorite collection at Cap-Prudhomme has allowed construction of a new micrometeorite 'factory,' conceived to greatly reduce contamination of the ultraclean ice by our activities. The potential problems include fly ash, rust grains, fuel spills 'sticking to the shoes,' and trace elements from the plasticizers used in plastic tubing. In the new factory, intended to produce and then cycle 10-15 tons of melt ice water per day, all parts exposed to water were replaced by either stainless steel or teflon. After examination with a microscope and their transfer into teflon and or glass vials, all samples were frozen the day of their collection. The factory operated from December 15, 1993, through February 6, 1994. Problems included injuries as well as very bad weather conditions, characterized by both the heaviest snow falls observed and unexpected gusts from a blizzard. Also, several new components of the factory did not function properly under the extreme conditions of Antarctica. Our major objective was to obtain the 'cleanest' and 'purest' 25-50 microns micrometeorites ever collected in Antarctica, for comparison with stratospheric Interplanetary Dust Particles (IDPs). We could not fulfill this premise, but we recovered the best 100-400-micron-size fraction of 'giant' micrometeorites ever collected on Earth. Our 26 daily collections are listed,refering to an 'index of quality.' Aliquots of these daily collections will be distributed to major institutions in Austria, England, the U.S.A., and Japan, to be preserved for future generations. The Antarctica ice sheet is truly a gigantic, ultraclean, and inexhaustible micrometeorite collector, but it is very tricky to recover 'ultraclean' micrometeorites from it.

The International Geophysical Year in Antarctica: Uncommon Collaborations, Unprecedented Results

ERIC Educational Resources Information Center

Belanger, Dian Olson

2004-01-01

When 1 July 1957 ''dawned'' in the dark of the south polar night, Americans at seven scientific stations scattered across Antarctica officially began systematic, synoptic observations of the air above and ice below. Joining scientists from 11 other countries on the polar continent, they were part of the International Geophysical Year, an 18-month…

Mesoscale cyclogenesis dynamics over the southwestern Ross Sea, Antarctica

NASA Astrophysics Data System (ADS)

Carrasco, Jorge F.; Bromwich, David H.

1993-07-01

Previous work has shown that frequent mesoscale cyclogenesis adjacent to Franklin Island is linked to the strong and persistent katabatic winds from East Antarctica which funnel into Terra Nova Bay and then blow out over the southwestern Ross Sea. Four mesoscale cyclones that formed near Terra Nova Bay between February 16 and 20, 1988 are examined to more clearly define the governing mechanisms. These events are investigated using all available observations, including automatic weather station data, high-resolution satellite images, satellite soundings, and hemispheric synoptic analyses. The first two cyclones formed on low-level baroclinic zones established by the synoptic scale advection of warm moist air toward the cold continental air blowing gently from East Antarctica. In the second case, baroclinic instability of this small-scale cold front was apparently triggered by the enhanced upward vertical motion associated with the approach of a midtropospheric trough. The third mesocyclone formed shortly after on a baroclinic zone over the polar plateau; the second vortex completely disrupted the usual katabatic drainage over the plateau and forced warm moist air over the coastal slopes. All three cyclones moved to the north in the prevailing cyclonic flow, but the plateau vortex lasted for only 6 hours. The fourth mesoscale low formed in conjunction with an abrupt and intense surge of katabatic air from Terra Nova Bay which resharpened the coastal baroclinic zone. At the same time a transiting midtropospheric trough probably associated with lower tropospheric upward vertical motion apparently accelerated the katabatic winds and triggered the vortex formation. A similar katabatic wind-forced mesocyclone formed near Byrd Glacier. The two vortices moved to the east-southeast and northeast, respectively, apparently being steered by the generating katabatic airstreams, and merged just to the north of the Ross Ice Shelf. The combined vortex reintensified as another

The Bess-Polar II Long Duration Flight Above Antarctica

NASA Technical Reports Server (NTRS)

Sasaki, Makoto; Yamamoto, Akira; Yoshimura, Koji; Makida, Yasuhiro; Matsuda, Shinya; Hasegawa, Masaya; Horikoshi, Atsushi; Tanaka, Ken-ichi; Suzuki, Junichi; Nishimura, Jun;

Yeast as a model for Ras signalling.

PubMed

Tisi, Renata; Belotti, Fiorella; Martegani, Enzo

2014-01-01

For centuries yeast species have been popular hosts for classical biotechnology processes, such as baking, brewing, and wine making, and more recently for recombinant proteins production, thanks to the advantages of unicellular organisms (i.e., ease of genetic manipulation and rapid growth) together with the ability to perform eukaryotic posttranslational modifications. Moreover, yeast cells have been used for few decades as a tool for identifying the genes and pathways involved in basic cellular processes such as the cell cycle, aging, and stress response. In the budding yeast S. cerevisiae the Ras/cAMP/PKA pathway is directly involved in the regulation of metabolism, cell growth, stress resistance, and proliferation in response to the availability of nutrients and in the adaptation to glucose, controlling cytosolic cAMP levels and consequently the cAMP-dependent protein kinase (PKA) activity. Moreover, Ras signalling has been identified in several pathogenic yeasts as a key controller for virulence, due to its involvement in yeast morphogenesis. Nowadays, yeasts are still useful for Ras-like proteins investigation, both as model organisms and as a test tube to study variants of heterologous Ras-like proteins.

Flor Yeast: New Perspectives Beyond Wine Aging

PubMed Central

Legras, Jean-Luc; Moreno-Garcia, Jaime; Zara, Severino; Zara, Giacomo; Garcia-Martinez, Teresa; Mauricio, Juan C.; Mannazzu, Ilaria; Coi, Anna L.; Bou Zeidan, Marc; Dequin, Sylvie; Moreno, Juan; Budroni, Marilena

2016-01-01

The most important dogma in white-wine production is the preservation of the wine aroma and the limitation of the oxidative action of oxygen. In contrast, the aging of Sherry and Sherry-like wines is an aerobic process that depends on the oxidative activity of flor strains of Saccharomyces cerevisiae. Under depletion of nitrogen and fermentable carbon sources, these yeast produce aggregates of floating cells and form an air–liquid biofilm on the wine surface, which is also known as velum or flor. This behavior is due to genetic and metabolic peculiarities that differentiate flor yeast from other wine yeast. This review will focus first on the most updated data obtained through the analysis of flor yeast with -omic tools. Comparative genomics, proteomics, and metabolomics of flor and wine yeast strains are shedding new light on several features of these special yeast, and in particular, they have revealed the extent of proteome remodeling imposed by the biofilm life-style. Finally, new insights in terms of promotion and inhibition of biofilm formation through small molecules, amino acids, and di/tri-peptides, and novel possibilities for the exploitation of biofilm immobilization within a fungal hyphae framework, will be discussed. PMID:27148192

Physiological and environmental control of yeast prions

PubMed Central

Chernova, Tatiana A.; Wilkinson, Keith D.; Chernoff, Yury O.

2014-01-01

Prions are self-perpetuating protein isoforms that cause fatal and incurable neurodegenerative disease in mammals. Recent evidence indicates that a majority of human proteins involved in amyloid and neural inclusion disorders possess at least some prion properties. In lower eukaryotes, such as yeast, prions act as epigenetic elements, which increase phenotypic diversity by altering a range of cellular processes. While some yeast prions are clearly pathogenic, it is also postulated that prion formation could be beneficial in variable environmental conditions. Yeast and mammalian prions have similar molecular properties. Crucial cellular factors and conditions influencing prion formation and propagation were uncovered in the yeast models. Stress-related chaperones, protein quality control deposits, degradation pathways and cytoskeletal networks control prion formation and propagation in yeast. Environmental stresses trigger prion formation and loss, supposedly acting via influencing intracellular concentrations of the prion-inducing proteins, and/or by localizing prionogenic proteins to the prion induction sites via heterologous ancillary helpers. Physiological and environmental modulation of yeast prions points to new opportunities for pharmacological intervention and/or prophylactic measures targeting general cellular systems rather than the properties of individual amyloids and prions. PMID:24236638

Aeromagnetic evidence for a major strike-slip fault zone along the boundary between the Weddell Sea Rift and East Antarctica

NASA Astrophysics Data System (ADS)

Jordan, T. A.; Ferraccioli, F.; Ross, N.; Siegert, M. J.; Corr, H.; Leat, P. T.; Bingham, R. G.; Rippin, D. M.; le Brocq, A.

2012-04-01

The >500 km wide Weddell Sea Rift was a major focus for Jurassic extension and magmatism during the early stages of Gondwana break-up, and underlies the Weddell Sea Embayment, which separates East Antarctica from a collage of crustal blocks in West Antarctica. Here we present new aeromagnetic data combined with airborne radar and gravity data collected during the 2010-11 field season over the Institute and Moeller ice stream in West Antarctica. Our interpretations identify the major tectonic boundaries between the Weddell Sea Rift, the Ellsworth-Whitmore Mountains block and East Antarctica. Digitally enhanced aeromagnetic data and gravity anomalies indicate the extent of Proterozoic basement, Middle Cambrian rift-related volcanic rocks, Jurassic granites, and post Jurassic sedimentary infill. Two new joint magnetic and gravity models were constructed, constrained by 2D and 3D magnetic depth-to-source estimates to assess the extent of Proterozoic basement and the thickness of major Jurassic intrusions and post-Jurassic sedimentary infill. The Jurassic granites are modelled as 5-8 km thick and emplaced at the transition between the thicker crust of the Ellsworth-Whitmore Mountains block and the thinner crust of the Weddell Sea Rift, and within the Pagano Fault Zone, a newly identified ~75 km wide left-lateral strike-slip fault system that we interpret as a major tectonic boundary between East and West Antarctica. We also suggest a possible analogy between the Pagano Fault Zone and the Dead Sea transform. In this scenario the Jurassic Pagano Fault Zone is the kinematic link between extension in the Weddell Sea Rift and convergence across the Pacific margin of West Antarctica, as the Dead Sea transform links Red Sea extension to compression within the Zagros Mountains.

Isolation and characterization of ethanol tolerant yeast strains

PubMed Central

Tikka, Chiranjeevi; Osuru, Hari Prasad; Atluri, Navya; Raghavulu, Praveen Chakravarthi Veera; yellapu, Nanda Kumar; Mannur, Ismail Shaik; Prasad, Uppu Venkateswara; Aluru, Sudheer; K, Narasimha Varma; Bhaskar, Matcha

2013-01-01

Yeast strains are commonly associated with sugar rich environments. Various fruit samples were selected as source for isolating yeast cells. The isolated cultures were identified at Genus level by colony morphology, biochemical characteristics and cell morphological characters. An attempt has been made to check the viability of yeast cells under different concentrations of ethanol. Ethanol tolerance of each strain was studied by allowing the yeast to grow in liquid YEPD (Yeast Extract Peptone Dextrose) medium having different concentrations of ethanol. A total of fifteen yeast strains isolated from different samples were used for the study. Seven strains of Saccharomyces cerevisiae obtained from different fruit sources were screened for ethanol tolerance. The results obtained in this study show a range of tolerance levels between 7%-12% in all the stains. Further, the cluster analysis based on 22 RAPD (Random Amplified polymorphic DNA) bands revealed polymorphisms in these seven Saccharomyces strains. PMID:23750092

Phylogenetics of Saccharomycetales, the ascomycete yeasts.

PubMed

Suh, Sung-Oui; Blackwell, Meredith; Kurtzman, Cletus P; Lachance, Marc-André

2006-01-01

Ascomycete yeasts (phylum Ascomycota: subphylum Saccharomycotina: class Saccharomycetes: order Saccharomycetales) comprise a monophyletic lineage with a single order of about 1000 known species. These yeasts live as saprobes, often in association with plants, animals and their interfaces. A few species account for most human mycotic infections, and fewer than 10 species are plant pathogens. Yeasts are responsible for important industrial and biotechnological processes, including baking, brewing and synthesis of recombinant proteins. Species such as Saccharomyces cerevisiae are model organisms in research, some of which led to a Nobel Prize. Yeasts usually reproduce asexually by budding, and their sexual states are not enclosed in a fruiting body. The group also is well defined by synapomorphies visible at the ultrastructural level. Yeast identification and classification changed dramatically with the availability of DNA sequencing. Species identification now benefits from a constantly updated sequence database and no longer relies on ambiguous growth tests. A phylogeny based on single gene analyses has shown the order to be remarkably divergent despite morphological similarities among members. The limits of many previously described genera are not supported by sequence comparisons, and multigene phylogenetic studies are under way to provide a stable circumscription of genera, families and orders. One recent multigene study has resolved species of the Saccharomycetaceae into genera that differ markedly from those defined by analysis of morphology and growth responses, and similar changes are likely to occur in other branches of the yeast tree as additional sequences become available.

Yeast species associated with wine grapes in China.

PubMed

Li, Shuang-Shi; Cheng, Chao; Li, Zheng; Chen, Jing-Yu; Yan, Bin; Han, Bei-Zhong; Reeves, Malcolm

2010-03-31

Having more information on the yeast ecology of grapes is important for wine-makers to produce wine with high quality and typical attributes. China is a significant wine-consuming country and is becoming a serious wine-producer, but little has been reported about the yeast ecology of local ecosystems. This study provides the first step towards the exploitation of the yeast wealth in China's vine-growing regions. The aim of this study was to investigate the yeast population density and diversity on three grape varieties cultivated in four representative vine-growing regions of China. Yeast species diversity was evaluated by using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) and sequence analysis of the 5.8S internal transcribed spacer (ITS) ribosomal DNA (rDNA) region of cultivable yeasts. The grapes harbored yeast populations at 10(2)-10(6)CFU/mL, consisting mostly of non-Saccharomyces species. Seventeen different yeast species belonging to eight genera were detected on the grape samples tested, including Hanseniaspora uvarum, Cryptococcus flavescens, Pichia fermentans, Candida zemplinina, Cryptococcus carnescens, Candida inconpicua, Zygosaccharomyces fermentati, Issatchenkia terricola, Candida quercitrusa, Hanseniaspora guilliermondii, Candida bombi, Zygosaccharomyces bailii, Sporidiobolus pararoseus, Cryptococcus magnus, Metschnikowia pulcherrima, Issatchenkia orientalis and Pichia guilliermondii. H. uvarum and C. flavescens were the dominant species present on the grapes. For the first time Sporidiobolus pararoseus was discovered as an inhabitant of the grape ecosystem. The yeast community on grape berries was influenced by the grape chemical composition, vine-variety and vine-growing region. This study is the first to identify the yeast communities associated with grapes in China using molecular methods. The results enrich our knowledge of wine-related microorganisms, and can be used to promote the development of the local wine

Antimicrobial activity of yeasts against some pathogenic bacteria

PubMed Central

Younis, Gamal; Awad, Amal; Dawod, Rehab E.; Yousef, Nehal E.

2017-01-01

Aim: This study was designed to isolate and identify yeast species from milk and meat products, and to test their antimicrobial activity against some bacterial species. Materials and Methods: A total of 160 milk and meat products samples were collected from random sellers and super markets in New Damietta city, Damietta, Egypt. Samples were subjected to yeast isolation procedures and tested for its antimicrobial activity against Staphylococcus aureus, Pseudomonas aeruginosa, and Escherichia coli. In addition, all yeast species isolates were subjected to polymerase chain reaction (PCR) for detection of khs (kievitone hydratase) and pelA (pectate degrading enzyme)genes. Results: The recovery rate of yeasts from sausage was 20% (2/10) followed by kareish cheese, processed cheese, and butter 10% (1/10) each as well as raw milk 9% (9/100), and fruit yoghurt 30% (6/20). Different yeast species were recovered, namely, Candida kefyr (5 isolates), Saccharomyces cerevisiae (4 isolates), Candida intermedia (3 isolates), Candida tropicalis (2 isolates), Candida lusitaniae (2 isolates), and Candida krusei (1 isolate). khs gene was detected in all S. cerevisiae isolates, however, pelA gene was not detected in all identified yeast species. Antimicrobial activity of recovered yeasts against the selected bacterial species showed high activity with C. intermedia against S. aureus and E. coli, C. kefyr against E. coli, and C. lusitaniae against S. aureus. Moderate activities were obtained with C. tropicalis, C. lusitaniae, and S. cerevisiae against E. coli; meanwhile, all the tested yeasts revealed a very low antimicrobial activity against P. aeruginosa. Conclusion: The obtained results confirmed that some kinds of yeasts have the ability to produce antimicrobial compounds that could inhibit some pathogenic and spoilage bacteria and these antimicrobial activity of yeasts enables them to be one of the novel agents in controlling spoilage of food. PMID:28919693

Defining the ecologically relevant mixed-layer depth for Antarctica's coastal seas

NASA Astrophysics Data System (ADS)

Carvalho, Filipa; Kohut, Josh; Oliver, Matthew J.; Schofield, Oscar

2017-01-01

Mixed-layer depth (MLD) has been widely linked to phytoplankton dynamics in Antarctica's coastal regions; however, inconsistent definitions have made intercomparisons among region-specific studies difficult. Using a data set with over 20,000 water column profiles corresponding to 32 Slocum glider deployments in three coastal Antarctic regions (Ross Sea, Amundsen Sea, and West Antarctic Peninsula), we evaluated the relationship between MLD and phytoplankton vertical distribution. Comparisons of these MLD estimates to an applied definition of phytoplankton bloom depth, as defined by the deepest inflection point in the chlorophyll profile, show that the maximum of buoyancy frequency is a good proxy for an ecologically relevant MLD. A quality index is used to filter profiles where MLD is not determined. Despite the different regional physical settings, we found that the MLD definition based on the maximum of buoyancy frequency best describes the depth to which phytoplankton can be mixed in Antarctica's coastal seas.

Genomic evolution of the ascomycetous yeasts

USDA-ARS?s Scientific Manuscript database

Yeasts are important for industrial and biotechnological processes and show remarkable metabolic and phylogenetic diversity despite morphological similarities. We have sequenced the genomes of 16 ascomycete yeasts of taxonomic and industrial importance including members of Saccharomycotina and Taphr...

Repeat-Associated Fission Yeast-Like Regional Centromeres in the Ascomycetous Budding Yeast Candida tropicalis

PubMed Central

Chatterjee, Gautam; Sankaranarayanan, Sundar Ram; Guin, Krishnendu; Thattikota, Yogitha; Padmanabhan, Sreedevi; Siddharthan, Rahul; Sanyal, Kaustuv

2016-01-01

The centromere, on which kinetochore proteins assemble, ensures precise chromosome segregation. Centromeres are largely specified by the histone H3 variant CENP-A (also known as Cse4 in yeasts). Structurally, centromere DNA sequences are highly diverse in nature. However, the evolutionary consequence of these structural diversities on de novo CENP-A chromatin formation remains elusive. Here, we report the identification of centromeres, as the binding sites of four evolutionarily conserved kinetochore proteins, in the human pathogenic budding yeast Candida tropicalis. Each of the seven centromeres comprises a 2 to 5 kb non-repetitive mid core flanked by 2 to 5 kb inverted repeats. The repeat-associated centromeres of C. tropicalis all share a high degree of sequence conservation with each other and are strikingly diverged from the unique and mostly non-repetitive centromeres of related Candida species—Candida albicans, Candida dubliniensis, and Candida lusitaniae. Using a plasmid-based assay, we further demonstrate that pericentric inverted repeats and the underlying DNA sequence provide a structural determinant in CENP-A recruitment in C. tropicalis, as opposed to epigenetically regulated CENP-A loading at centromeres in C. albicans. Thus, the centromere structure and its influence on de novo CENP-A recruitment has been significantly rewired in closely related Candida species. Strikingly, the centromere structural properties along with role of pericentric repeats in de novo CENP-A loading in C. tropicalis are more reminiscent to those of the distantly related fission yeast Schizosaccharomyces pombe. Taken together, we demonstrate, for the first time, fission yeast-like repeat-associated centromeres in an ascomycetous budding yeast. PMID:26845548

High Resolution Spatial Mapping of Human Footprint across Antarctica and Its Implications for the Strategic Conservation of Avifauna.

PubMed

Pertierra, Luis R; Hughes, Kevin A; Vega, Greta C; Olalla-Tárraga, Miguel Á

2017-01-01

Human footprint models allow visualization of human spatial pressure across the globe. Up until now, Antarctica has been omitted from global footprint models, due possibly to the lack of a permanent human population and poor accessibility to necessary datasets. Yet Antarctic ecosystems face increasing cumulative impacts from the expanding tourism industry and national Antarctic operator activities, the management of which could be improved with footprint assessment tools. Moreover, Antarctic ecosystem dynamics could be modelled to incorporate human drivers. Here we present the first model of estimated human footprint across predominantly ice-free areas of Antarctica. To facilitate integration into global models, the Antarctic model was created using methodologies applied elsewhere with land use, density and accessibility features incorporated. Results showed that human pressure is clustered predominantly in the Antarctic Peninsula, southern Victoria Land and several areas of East Antarctica. To demonstrate the practical application of the footprint model, it was used to investigate the potential threat to Antarctica's avifauna by local human activities. Relative footprint values were recorded for all 204 of Antarctica's Important Bird Areas (IBAs) identified by BirdLife International and the Scientific Committee on Antarctic Research (SCAR). Results indicated that formal protection of avifauna under the Antarctic Treaty System has been unsystematic and is lacking for penguin and flying bird species in some of the IBAs most vulnerable to human activity and impact. More generally, it is hoped that use of this human footprint model may help Antarctic Treaty Consultative Meeting policy makers in their decision making concerning avifauna protection and other issues including cumulative impacts, environmental monitoring, non-native species and terrestrial area protection.

Culturable bacterial diversity at the Princess Elisabeth Station (Utsteinen, Sør Rondane Mountains, East Antarctica) harbours many new taxa.

PubMed

Peeters, Karolien; Ertz, Damien; Willems, Anne

2011-07-01

We studied the culturable heterotrophic bacterial diversity present at the site of the new Princess Elisabeth Station at Utsteinen (Dronning Maud Land, East Antarctica) before construction. About 800 isolates were picked from two terrestrial microbial mat samples after incubation on several growth media at different temperatures. They were grouped using rep-PCR fingerprinting and partial 16S rRNA gene sequencing. Phylogenetic analysis of the complete 16S rRNA gene sequences of 93 representatives showed that the isolates belonged to five major phyla: Actinobacteria, Bacteroidetes, Proteobacteria, Firmicutes and Deinococcus-Thermus. Isolates related to the genus Arthrobacter were the most prevalent whereas the genera Hymenobacter, Deinococcus, Cryobacterium and Sphingomonas were also recovered in high numbers in both samples. A total of 35 different genera were found, the majority of which has previously been reported from Antarctica. For the genera Aeromicrobium, Aurantimonas, Rothia, Subtercola, Tessaracoccus and Xylophilus, this is the first report in Antarctica. In addition, numerous potential new species and new genera were recovered; many of them currently restricted to Antarctica, particularly in the phyla Bacteroidetes and Deinococcus-Thermus. Copyright © 2011 Elsevier GmbH. All rights reserved.

Brazil, Atlantic Ocean, Africa, Sahara & Antarctica seen from Apollo 4

NASA Image and Video Library

1967-11-09

AS04-01-410 (9 Nov. 1967) --- Coastal Brazil, Atlantic Ocean, West Africa, Sahara, Antarctica, looking west, as photographed from the Apollo 4 (Spacecraft 017/Saturn 501) unmanned, Earth-orbital space mission. This picture was taken when the Spacecraft 017 and Saturn S-IVB (third) stage were orbiting Earth at an altitude of 9,745 nautical miles.

Chemical characterization of microbial-dominated soil organic matter in the Garwood Valley, Antarctica

NASA Astrophysics Data System (ADS)

Feng, Xiaojuan; Simpson, André J.; Gregorich, Edward G.; Elberling, Bo; Hopkins, David W.; Sparrow, Ashley D.; Novis, Philip M.; Greenfield, Lawrence G.; Simpson, Myrna J.

2010-11-01

Despite its harsh environmental conditions, terrestrial Antarctica contains a relatively large microbial biomass. Natural abundance carbon and nitrogen stable isotope signatures of organic materials in the dry valleys indicate mixed provenance of the soil organic matter (SOM) with varying proportions of contributions from lichens, mosses, lake-derived algae and cyanobacteria. Here we employed two complementary analytical techniques, biomarker measurements by gas chromatography/mass spectrometry and solution-state 1H nuclear magnetic resonance spectroscopy, to provide further information at a molecular-level about the composition and possible source of SOM in the Garwood Valley, Antarctica. The predominance of branched alkanes and short-chain lipids in the solvent extracts indicates that the primary contribution to the SOM was microbial-derived. Chemical structures in the NaOH extracts from soils were also dominated by amide, peptides, and a CH 3-dominating aliphatic region that were characteristic of microbial signatures. Furthermore, the SOM in the Garwood Valley contained compounds that were different from those in the cyanobacteria-dominated mat from a nearby lake (including monoethyl alkanes and enriched side-chain protons). This observation suggests that easily degradable carbon sources from the nearby lake did not dominate the SOM, which is consistent with a fast turnover of the mat-derived organic matter found in the valley. This study highlights the important role of native soil microbes in the carbon transformation and biogeochemistry in terrestrial Antarctica.

Comparative genomics of biotechnologically important yeasts

USDA-ARS?s Scientific Manuscript database

Ascomycete yeasts are metabolically diverse, with great potential for biotechnology. Here, we report the comparative genome analysis of 29 taxonomically and biotechnologically important yeasts, including 16 newly sequenced. We identify a genetic code change, CUG-Ala, in Pachysolen tannophilus in the...

Counting Yeast.

ERIC Educational Resources Information Center

Bealer, Jonathan; Welton, Briana

1998-01-01

Describes changes to a traditional study of population in yeast colonies. Changes to the procedures include: (1) only one culture per student team; (2) cultures are inoculated only once; and (3) the same tube is sampled daily. (DDR)

Antarctica Cloud Cover for October 2003 from GLAS Satellite Lidar Profiling

NASA Technical Reports Server (NTRS)

Spinhirne, J. D.; Palm, S. P.; Hart, W. D.

2005-01-01

Seeing clouds in polar regions has been a problem for the imagers used on satellites. Both clouds and snow and ice are white, which makes clouds over snow hard to see. And for thermal infrared imaging both the surface and the clouds cold. The Geoscience Laser Altimeter System (GLAS) launched in 2003 gives an entirely new way to see clouds from space. Pulses of laser light scatter from clouds giving a signal that is separated in time from the signal from the surface. The scattering from clouds is thus a sensitive and direct measure of the presence and height of clouds. The GLAS instrument orbits over Antarctica 16 times a day. All of the cloud observations for October 2003 were summarized and compared to the results from the MODIS imager for the same month. There are two basic cloud types that are observed, low stratus with tops below 3 km and high cirrus form clouds with cloud top altitude and thickness tending at 12 km and 1.3 km respectively. The average cloud cover varies from over 93 % for ocean and coastal regions to an average of 40% over the East Antarctic plateau and 60-90% over West Antarctica. When the GLAS monthly average cloud fractions are compared to the MODIS cloud fraction data product, differences in the amount of cloud cover are as much as 40% over the continent. The results will be used to improve the way clouds are detected from the imager observations. These measurements give a much improved understanding of distribution of clouds over Antarctica and may show how they are changing as a result of global warming.

Reliability Analysis of Main-axis Control System of the Equatorial Antarctica Astronomical Telescope Based on Fault Tree

NASA Astrophysics Data System (ADS)

LI, Y.; Yang, S. H.

2017-05-01

The Antarctica astronomical telescopes work chronically on the top of the unattended South Pole, and they have only one chance to maintain every year. Due to the complexity of the optical, mechanical, and electrical systems, the telescopes are hard to be maintained and need multi-tasker expedition teams, which means an excessive awareness is essential for the reliability of the Antarctica telescopes. Based on the fault mechanism and fault mode of the main-axis control system for the equatorial Antarctica astronomical telescope AST3-3 (Antarctic Schmidt Telescopes 3-3), the method of fault tree analysis is introduced in this article, and we obtains the importance degree of the top event from the importance degree of the bottom event structure. From the above results, the hidden problems and weak links can be effectively found out, which will indicate the direction for promoting the stability of the system and optimizing the design of the system.

The subglacial roughness of Antarctica: Analogs, interpretation and implications for ice thickness uncertainities

NASA Astrophysics Data System (ADS)

Young, D. A.; Grima, C.; Greenbaum, J. S.; Beem, L.; Cavitte, M. G.; Quartini, E.; Kempf, S. D.; Roberts, J. L.; Siegert, M. J.; Ritz, C.; Blankenship, D. D.

2017-12-01

Over the last twenty five years, extensive ice penetrating radar (IPR) coverage of Antarctica has been obtained, at lines spacings down to 1 km in some cases. However, many glacial processes occur at finer scales, so infering likely landscape parameters is required for a useful interpolation between lines. Profile roughness is also important for understanding the uncertainties inherent in IPR observations. Subglacial roughness has also been used to infer large scale bed rock properties and history. Similar work has been conducted on a regional basis with complilations of data from the 1970's and more recent local studies. Here we present a compilation of IPR-derived profile roughness data covering three great basins of Antarctica: the Byrd Subglacial Basin in West Antarctica, and the Wilkes Subglacial Basin and Aurora Subglacial Basins in East Antarctica; and treat these data using root mean squared deviation (RMSD). Coverage is provied by a range of IPR systems with varying vintages with differing instrument and processing parameters; we present approaches to account for the differences between these systems. We use RMSD, a tool commonly used in planetary investigations, to investigate the self-affine behaviour of the bed at kilometer scales and extract fractal parameters from the data to predict roughness and uncertainties in ice thickness measurement. Lastly, we apply a sensor model to a range of bare-earth terrestrial digital elevation models to futher understand the impact of the sensor model on the inference of subglacial topography and roughness, and to the first order analogies for the lithology of the substrate. This map of roughness, at scales between the pulse limited radar footprint and typical line spacings, provides an understanding of the distribution of Paleogene subglacial sediments, insight in to the distribution of uncertainties and a potential basal properties mask for ice sheet models. A particular goal of this map is to provide insight into

Morphological evidence and direct estimates of rapid melting beneath Totten Glacier Ice Shelf, East Antarctica

NASA Astrophysics Data System (ADS)

Greenbaum, Jamin; Schroeder, Dustin; Grima, Cyril; Habbal, Feras; Dow, Christine; Roberts, Jason; Gwyther, David; van Ommen, Tas; Siegert, Martin; Blankenship, Donald

2017-04-01

Totten Glacier drains at least 3.5 meters of eustatic sea level potential from marine-based ice in the Aurora Subglacial Basin (ASB) in East Antarctica, more than the combined total of all glaciers in West Antarctica. Totten Glacier has been the most rapidly thinning glacier in East Antarctica since satellite altimetry time series began and the nature of the thinning suggests that it is driven by enhanced basal melting due to ocean processes. While grounded ice thinning rates have been steady, recent work has shown that Totten's floating ice shelf may not have the same thinning behavior; as a result, it is critical to observe ice shelf and cavity boundary conditions and basal processes to understand this apparent discrepancy. Warm Modified Circumpolar Deep Water (MCDW), which has been linked to glacier retreat in West Antarctica, has been observed in summer and winter on the nearby Sabrina Coast continental shelf and deep depressions in the seafloor provide access for MCDW to reach the ice shelf cavity. Given its northern latitude, numerical ice sheet modeling indicates that Totten Glacier may be prone to retreat caused by hydrofracture in a warming climate, so it is important to understand how intruding MCDW is affecting thinning of Totten Glacier's ice shelf. Here we use post-processed, focused airborne radar observations of the Totten Glacier Ice Shelf to delineate multi-km wide basal channels and flat basal terraces associated with high basal reflectivity and specularity (flatness) anomalies and correspondingly large ice surface depressions that indicate active basal melting. Using a simple temperature-attenuation model, and basal roughness corrections, we present basal melt rates associated with the radar reflection and specularity anomalies and compare them to those derived from numerical ocean circulation modeling and an ice flow divergence calculation. Sub-ice shelf ocean circulation modeling and under-ice robotic observations of Pine Island Glacier Ice

NASA Satellite View of Antarctica

NASA Image and Video Library

2017-12-08

NASA image acquired November 2, 2011 The Moderate Resolution Imaging Spectroradiometer (MODIS) instrument on NASA's Terra satellite captured this image of the Knox, Budd Law Dome, and Sabrina Coasts, Antarctica on November 2, 2011 at 01:40 UTC (Nov. 1 at 9:40 p.m. EDT). Operation Ice Bridge is exploring Antarctic ice, and more information can be found at www.nasa.gov/icebridge. Image Credit: NASA Goddard MODIS Rapid Response Team NASA image use policy. NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Like us on Facebook Find us on Instagram

Ice-Shelf Melting Around Antarctica

NASA Astrophysics Data System (ADS)

Rignot, E.; Jacobs, S.; Mouginot, J.; Scheuchl, B.

2013-07-01

We compare the volume flux divergence of Antarctic ice shelves in 2007 and 2008 with 1979 to 2010 surface accumulation and 2003 to 2008 thinning to determine their rates of melting and mass balance. Basal melt of 1325 ± 235 gigatons per year (Gt/year) exceeds a calving flux of 1089 ± 139 Gt/year, making ice-shelf melting the largest ablation process in Antarctica. The giant cold-cavity Ross, Filchner, and Ronne ice shelves covering two-thirds of the total ice-shelf area account for only 15% of net melting. Half of the meltwater comes from 10 small, warm-cavity Southeast Pacific ice shelves occupying 8% of the area. A similar high melt/area ratio is found for six East Antarctic ice shelves, implying undocumented strong ocean thermal forcing on their deep grounding lines.

Yeast diversity and native vigor for flavor phenotypes.

PubMed

Carrau, Francisco; Gaggero, Carina; Aguilar, Pablo S

2015-03-01

Saccharomyces cerevisiae, the yeast used widely for beer, bread, cider, and wine production, is the most resourceful eukaryotic model used for genetic engineering. A typical concern about using engineered yeasts for food production might be negative consumer perception of genetically modified organisms. However, we believe the true pitfall of using genetically modified yeasts is their limited capacity to either refine or improve the sensory properties of fermented foods under real production conditions. Alternatively, yeast diversity screening to improve the aroma and flavors could offer groundbreaking opportunities in food biotechnology. We propose a 'Yeast Flavor Diversity Screening' strategy which integrates knowledge from sensory analysis and natural whole-genome evolution with information about flavor metabolic networks and their regulation. Copyright © 2015 Elsevier Ltd. All rights reserved.

Geochemical markers of soil anthropogenic contaminants in polar scientific stations nearby (Antarctica, King George Island).

PubMed

Prus, Wojciech; Fabiańska, Monika J; Łabno, Radosław

2015-06-15

The organic contamination of Antarctic soils and terrestrial sediments from nearby of five polar scientific stations on King George Island (Antarctica) was investigated. Gas chromatography-mass spectrometry (GC-MS) was applied to find composition of dichloromethane extracts of soil and terrestrial sediments. The presence of geochemical markers, such as n-alkanes, steranes, pentacyclic triterpenoids, and alkyl PAHs, their distribution types, and values of their ratios indicates the predominating source of organic fossil fuels and products of their refining rather than from the natural Antarctic environment. Fossil fuel-originated compounds well survived in conditions of Antarctic climate over long times thus enabling to characterize geochemical features of source fossil fuel identified as petroleum expelled from kerogen II of algal/bacterial origins deposited in sub-oxic conditions and being in the middle of catagenesis. Both microbial activity and water leaching play an important role in degradation of terrestrial oil spills in the Antarctica climate, and petroleum alteration occurs lowly over long periods of time. Synthetic anthropogenic compounds found in terrestrial Antarctica sediments included diisopropylnaphthalenes, products of their sulfonates degradation in paper combustion, and organophosporus compounds used as retardants and plasticizers. Copyright © 2015 Elsevier B.V. All rights reserved.

Making Sense of the Yeast Sphingolipid Pathway.

PubMed

Megyeri, Márton; Riezman, Howard; Schuldiner, Maya; Futerman, Anthony H

2016-12-04

Sphingolipids (SL) and their metabolites play key roles both as structural components of membranes and as signaling molecules. Many of the key enzymes and regulators of SL metabolism were discovered using the yeast Saccharomyces cerevisiae, and based on the high degree of conservation, a number of mammalian homologs were identified. Although yeast continues to be an important tool for SL research, the complexity of SL structure and nomenclature often hampers the ability of new researchers to grasp the subtleties of yeast SL biology and discover new modulators of this intricate pathway. Moreover, the emergence of lipidomics by mass spectrometry has enabled the rapid identification of SL species in yeast and rendered the analysis of SL composition under various physiological and pathophysiological conditions readily amenable. However, the complex nomenclature of the identified species renders much of the data inaccessible to non-specialists. In this review, we focus on parsing both the classical SL nomenclature and the nomenclature normally used during mass spectrometry analysis, which should facilitate the understanding of yeast SL data and might shed light on biological processes in which SLs are involved. Finally, we discuss a number of putative roles of various yeast SL species. Copyright © 2016 Elsevier Ltd. All rights reserved.

Novel brewing yeast hybrids: creation and application.

PubMed

Krogerus, Kristoffer; Magalhães, Frederico; Vidgren, Virve; Gibson, Brian

2017-01-01

The natural interspecies Saccharomyces cerevisiae × Saccharomyces eubayanus hybrid yeast is responsible for global lager beer production and is one of the most important industrial microorganisms. Its success in the lager brewing environment is due to a combination of traits not commonly found in pure yeast species, principally low-temperature tolerance, and maltotriose utilization. Parental transgression is typical of hybrid organisms and has been exploited previously for, e.g., the production of wine yeast with beneficial properties. The parental strain S. eubayanus has only been discovered recently and newly created lager yeast strains have not yet been applied industrially. A number of reports attest to the feasibility of this approach and artificially created hybrids are likely to have a significant impact on the future of lager brewing. De novo S. cerevisiae × S. eubayanus hybrids outperform their parent strains in a number of respects, including, but not restricted to, fermentation rate, sugar utilization, stress tolerance, and aroma formation. Hybrid genome function and stability, as well as different techniques for generating hybrids and their relative merits are discussed. Hybridization not only offers the possibility of generating novel non-GM brewing yeast strains with unique properties, but is expected to aid in unraveling the complex evolutionary history of industrial lager yeast.

Reasons for medical consultation among members of the Indian Scientific Expeditions to Antarctica

PubMed Central

Bhatia, Abhijeet; Malhotra, Pradip; Agarwal, Ashok Kumar

2013-01-01

The article attempts to analyze the disease burden in a healthy, pre-screened population subjected to prolonged residence in the hostile environment of Antarctica. This retrospective epidemiological study was conducted utilizing data from medical consultation room on board the Indian Antarctic expedition vessels and at Indian Antarctic station, Maitri from seven Indian Scientific Expeditions to Antarctica (ISEA). The study group (n=327) consisted of 325 men and two women. The total number of medical room consultations was 1989. Maximum consultations were for injuries (27.25%); 14.68% were musculoskeletal and 10.31% were bruises and lacerations. Disturbances of gastrointestinal tract (19.66%) were the second most common disorders. Psychological disturbances accounted for 2.66% consultations. Cold injuries constituted 2.01% consultations and photophthalmia accounted for 1.06% consultations. PMID:23423959

My IGY in Antarctica

NASA Technical Reports Server (NTRS)

Bentley, Charles

2012-01-01

Dr Charles Bentley is the A.P. Crary Professor Emeritus of Geophysics, Department of Geology and Geophysics, University of Wisconsin-Madison. Dr. Bentley joined the Arctic Institute of North America in 1956 to participate in International Geophysical Year (IGY)-related activities in the Antarctic. He wintered over consecutively in 1957 and 1958 at Byrd Station, a station in the interior of West Antarctica that housed 24 men each winter - 12 Navy support people and 12 civilian scientists/technicians. During the austral summers, he also participated in over-snow traverses, first as co-leader, then leader (the other coleader went home after the first year). These traverses consisted of six men and three vehicles, and lasted several months. These traverses covered more than 1609 kilometers (1000 miles) of largely unmapped and unphotographed terrain. During these traverses, connections to Byrd Station were by radio (daily, when the transmission conditions were good enough) and roughly every 2 weeks by resupply flight.

Improving industrial yeast strains: exploiting natural and artificial diversity

PubMed Central

Steensels, Jan; Snoek, Tim; Meersman, Esther; Nicolino, Martina Picca; Voordeckers, Karin; Verstrepen, Kevin J

2014-01-01

Yeasts have been used for thousands of years to make fermented foods and beverages, such as beer, wine, sake, and bread. However, the choice for a particular yeast strain or species for a specific industrial application is often based on historical, rather than scientific grounds. Moreover, new biotechnological yeast applications, such as the production of second-generation biofuels, confront yeast with environments and challenges that differ from those encountered in traditional food fermentations. Together, this implies that there are interesting opportunities to isolate or generate yeast variants that perform better than the currently used strains. Here, we discuss the different strategies of strain selection and improvement available for both conventional and nonconventional yeasts. Exploiting the existing natural diversity and using techniques such as mutagenesis, protoplast fusion, breeding, genome shuffling and directed evolution to generate artificial diversity, or the use of genetic modification strategies to alter traits in a more targeted way, have led to the selection of superior industrial yeasts. Furthermore, recent technological advances allowed the development of high-throughput techniques, such as ‘global transcription machinery engineering’ (gTME), to induce genetic variation, providing a new source of yeast genetic diversity. PMID:24724938

MALDI-TOF MS as a tool to identify foodborne yeasts and yeast-like fungi.

PubMed

Quintilla, Raquel; Kolecka, Anna; Casaregola, Serge; Daniel, Heide M; Houbraken, Jos; Kostrzewa, Markus; Boekhout, Teun; Groenewald, Marizeth

2018-02-02

Since food spoilage by yeasts causes high economic losses, fast and accurate identifications of yeasts associated with food and food-related products are important for the food industry. In this study the efficiency of the matrix assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) to identify food related yeasts was evaluated. A CBS in-house MALDI-TOF MS database was created and later challenged with a blinded test set of 146 yeast strains obtained from food and food related products. Ninety eight percent of the strains were correctly identified with log score values>1.7. One strain, Mrakia frigida, gained a correct identification with a score value<1.7. Two strains could not be identified at first as they represented a mix of two different species. These mixes were Rhodotorula babjevae with Meyerozyma caribbica and Clavispora lusitaniae with Debaryomyces hansenii. After separation, all four species could be correctly identified with scores>1.7. Ambiguous identifications were observed due to two incorrect reference mass spectra's found in the commercial database BDAL v.4.0, namely Candida sake DSM 70763 which was re-identified as Candida oleophila, and Candida inconspicua DSM 70631 which was re-identified as Pichia membranifaciens. MALDI-TOF MS can distinguish between most of the species, but for some species complexes, such as the Kazachstania telluris and Mrakia frigida complexes, MALDI-TOF MS showed limited resolution and identification of sibling species was sometimes problematic. Despite this, we showed that the MALDI-TOF MS is applicable for routine identification and validation of foodborne yeasts, but a further update of the commercial reference databases is needed. Copyright © 2017 Elsevier B.V. All rights reserved.

Comparative genomics of biotechnologically important yeasts

USDA-ARS?s Scientific Manuscript database

Saccharomyces cerevisiae, is used in the vast majority of the world’s bioprocesses, and its economic significance is unchallenged. It, however, represents only a small slice of yeast physiological diversity. Many other yeasts, are used in lesser known, but commercially important processes that take ...

Glycerol acyl-transfer kinetics of a circular permutated Candida antarctica Lipase B

USDA-ARS?s Scientific Manuscript database

Triacylglycerols containing a high abundance of unusual fatty acids, such as y-linolenic acid, or novel arylaliphatic acids, such as ferulic acid, are useful in pharmaceutical and cosmeceutical applications. Candida antarctica lipase B (CALB) is quite often used for non-aqueous synthesis, although ...

The Psychology of Isolated and Confined Environments: Understanding Human Behavior in Antarctica.

ERIC Educational Resources Information Center

Palinkas, Lawrence A.

2003-01-01

Reviews lessons learned from research in Antarctica with relevance to understanding human behavior in other isolated and confined environments. Outlines four distinct characteristics of psychosocial adaptation to such environments and discusses some of the benefits for individuals seeking challenging experiences. (Contains references.) (SLD)

The yeast Golgi apparatus: insights and mysteries

PubMed Central

Papanikou, Effrosyni; Glick, Benjamin S.

2009-01-01

The Golgi apparatus is known to modify and sort newly synthesized secretory proteins. However, fundamental mysteries remain about the structure, operation, and dynamics of this organelle. Important insights have emerged from studying the Golgi in yeasts. For example, yeasts have provided direct evidence for Golgi cisternal maturation, a mechanism that is likely to be broadly conserved. Here, we highlight features of the yeast Golgi as well as challenges that lie ahead. PMID:19879270

Evolution and variation of the yeast (Saccharomyces) genome.

PubMed

Mortimer, R K

2000-04-01

In this review we describe the role of the yeast Saccharomyces in the development of human societies including the use of this organism in the making of wine, bread, beer, and distilled beverages. We also discuss the tremendous diversity of yeast found in natural (i.e., noninoculated) wine fermentations and the scientific uses of yeast over the past 60 years. In conclusion, we present ideas on the model of "genome renewal" and the use of this model to explain the mode by which yeast has evolved and how diversity can be generated.

Evaluation of solar flares and electron precipitation by nitrate distribution in Antarctica

NASA Astrophysics Data System (ADS)

Dreschhoff, Gisela A.; Zeller, Edward J.

1991-10-01

Most of the time devoted to project research was spent in Antarctica. A firm core was drilled by hand to a depth of 29 meters at Windless Bight on the Ross Ice Shelf. The main result is that all of the major peaks identified as resulting from ionization caused by SPEs that were found in the 1988-89 core could also be identified in the analytical sequence from the 1990-91 core. Following the Antarctic field season, a set of snow samples were obtained that had been collected by the International Trans-Antarctica Expedition. The analysis of these samples showed nitrate flux that correlates closely with known spatial distribution of electron precipitation in the south polar region. A new apparatus has been build for field analysis on a continuous basis of nitrate and conductivity in a melt derived from the vertical melting of ice cores.

Complete Genome and Methylome Analysis of Psychrotrophic Bacterial Isolates from Lake Untersee in Antarctica.

PubMed

Fomenkov, Alexey; Akimov, Vladimir N; Vasilyeva, Lina V; Andersen, Dale T; Vincze, Tamas; Roberts, Richard J

2017-03-16

This paper describes the complete genome sequences and methylome analysis of six psychrotrophic strains isolated from perennially ice-covered Lake Untersee in Antarctica. Copyright © 2017 Fomenkov et al.

Epilithic lichens in the Beacon sandstone formation, Victoria Land, Antarctica

NASA Technical Reports Server (NTRS)

Hale, M. E.; Friedmann, E. I. (Principal Investigator)

1987-01-01

The epilithic lichen flora on the Beacon sandstone formation in Victoria Land consists of seven species: Acarospora gwynnii Dodge & Rudolph, Buellia grisea Dodge & Baker, B. pallida Dodge & Baker, Carbonea capsulata (Dodge & Baker) Hale comb. nov., Lecanora fuscobrunnea Dodge & Baker, Lecidea cancriformis Dodge & Baker, and L. siplei Dodge & Baker. The typification of the species is given along with descriptions and distribution in Antarctica.

The far reach of ice-shelf thinning in Antarctica

NASA Astrophysics Data System (ADS)

Reese, R.; Gudmundsson, G. H.; Levermann, A.; Winkelmann, R.

2018-01-01

Floating ice shelves, which fringe most of Antarctica's coastline, regulate ice flow into the Southern Ocean1-3. Their thinning4-7 or disintegration8,9 can cause upstream acceleration of grounded ice and raise global sea levels. So far the effect has not been quantified in a comprehensive and spatially explicit manner. Here, using a finite-element model, we diagnose the immediate, continent-wide flux response to different spatial patterns of ice-shelf mass loss. We show that highly localized ice-shelf thinning can reach across the entire shelf and accelerate ice flow in regions far from the initial perturbation. As an example, this `tele-buttressing' enhances outflow from Bindschadler Ice Stream in response to thinning near Ross Island more than 900 km away. We further find that the integrated flux response across all grounding lines is highly dependent on the location of imposed changes: the strongest response is caused not only near ice streams and ice rises, but also by thinning, for instance, well-within the Filchner-Ronne and Ross Ice Shelves. The most critical regions in all major ice shelves are often located in regions easily accessible to the intrusion of warm ocean waters10-12, stressing Antarctica's vulnerability to changes in its surrounding ocean.

Brewer's/baker's yeast (Saccharomyces cerevisiae) and preventive medicine: Part II.

PubMed

Moyad, Mark A

2008-02-01

Yeast is the term generally applied to a unicellular fungus, and there are hundreds of species now identified. One of the most notable and well-known species of yeast in health and wellness is known as Saccharomyces cerevisiae, which is also known by its more common names, brewer's yeast or baker's yeast. Typically, brewer's yeast is used as a protein supplement, energy booster, immune enhancer, or other vehicle where other compounds can be inserted to create a commercialized health product. For example, one of the most notable positive findings was the encouraging results from a large randomized trial of adults recently vaccinated for seasonal influenza who also received an over-the-counter daily adjuvant modified brewer's yeast-based product (EpiCor) to prevent colds and flu symptoms. The modified yeast-based product significantly reduced the incidence and duration of this common condition. Yeast-based technology is also being used as a molecular mechanistic model of caloric restriction (CR) with the goal of improving the human life span. The current and potential impact of yeast-based technology in medicine is encouraging and should receive more attention, but the recent preliminary positive results of CR in humans may be in part due to what has been already learned from brewer's yeast.

The yeast spectrum of the 'tea fungus Kombucha'.

PubMed

Mayser, P; Fromme, S; Leitzmann, C; Gründer, K

1995-01-01

The tea fungus 'Kombucha' is a symbiosis of Acetobacter, including Acetobacter xylinum as a characteristic species, and various yeasts. A characteristic yeast species or genus has not yet been identified. Kombucha is mainly cultivated in sugared black tea to produce a slightly acidulous effervescent beverage that is said to have several curative effects. In addition to sugar, the beverage contains small amounts of alcohol and various acids, including acetic acid, gluconic acid and lactic acid, as well as some antibiotic substances. To characterize the yeast spectrum with special consideration given to facultatively pathogenic yeasts, two commercially available specimens of tea fungus and 32 from private households in Germany were analysed by micromorphological and biochemical methods. Yeasts of the genera Brettanomyces, Zygosaccharomyces and Saccharomyces were identified in 56%, 29% and 26% respectively. The species Saccharomycodes ludwigii and Candida kefyr were only demonstrated in isolated cases. Furthermore, the tests revealed pellicle-forming yeasts such as Candida krusei or Issatchenkia orientalis/occidentalis as well as species of the apiculatus yeasts (Kloeckera, Hanseniaspora). Thus, the genus Brettanomyces may be a typical group of yeasts that are especially adapted to the environment of the tea fungus. However, to investigate further the beneficial effects of tea fungus, a spectrum of the other typical genera must be defined. Only three specimens showed definite contaminations. In one case, no yeasts could be isolated because of massive contamination with Penicillium spp. In the remaining two samples (from one household), Candida albicans was demonstrated. The low rate of contamination might be explained by protective mechanisms, such as formation of organic acids and antibiotic substances. Thus, subjects with a healthy metabolism do not need to be advised against cultivating Kombucha. However, those suffering from immunosuppression should preferably

[Yeast species in vulvovaginitis candidosa].

PubMed

Nemes-Nikodém, Éva; Tamási, Béla; Mihalik, Noémi; Ostorházi, Eszter

2015-01-04

Vulvovaginal candidiasis is the most common mycosis, however, the available information about antifungal susceptibilities of these yeasts is limited. To compare the gold standard fungal culture with a new molecular identification method and report the incidence of yeast species in vulvovaginitis candidosa. The authors studied 370 yeasts isolated from vulvovaginal candidiasis and identified them by phenotypic and molecular methods. The most common species was Candida albicans (85%), followed by Candida glabrata, and other Candida species. At present there are no recommendations for the evaluation of antifungal susceptibility of pathogenic fungal species occurring in vulvovaginal candidiasis and the natural antifungal resistance of the different species is known only. Matrix Assisted Laser Desorption Ionization Time of Flight identification can be used to differentiate the fluconazole resistant Candida dubliniensis and the sensitive Candida albicans strains.

Victoria Land, Ross Sea, and Ross Ice Shelf, Antarctica

NASA Technical Reports Server (NTRS)

2002-01-01

On December 19, 2001, MODIS acquired data that produced this image of Antarctica's Victoria Land, Ross Ice Shelf, and the Ross Sea. The coastline that runs up and down along the left side of the image denotes where Victoria Land (left) meets the Ross Ice Shelf (right). The Ross Ice Shelf is the world's largest floating body of ice, approximately the same size as France. Credit: Jacques Descloitres, MODIS Land Rapid Response Team, NASA/GSFC

Data report for the Siple Coast (Antarctica) project

NASA Technical Reports Server (NTRS)

Bindschadler, R. A.; Stephenson, S. N.; Roberts, E. P.; Macayeal, D. R.; Lindstrom, D. R.

1988-01-01

This report presents data collected during three field seasons of glaciological studies in the Antarctica and describes the methods employed. The region investigated covers the mouths of Ice Streams B and C (the Siple Coast) and Crary Ice Rise on the Ross Ice Shelf. Measurements included in the report are as follows: surface velocity and deformation from repeated satellite geoceiver positions; surface topography from optical levelling; radar sounding of ice thickness; accumulation rates; near-surface densities and temperature profiles; and mapping from aerial photography.

21 CFR 172.381 - Vitamin D2 bakers yeast.

Code of Federal Regulations, 2014 CFR

2014-04-01

... conventional bakers yeast. (c) The additive may be used in yeast-leavened baked goods and baking mixes and yeast-leavened baked snack foods at levels not to exceed 400 International Units of vitamin D2 per 100...

Anaerobic digestion of food waste using yeast.

PubMed

Suwannarat, Jutarat; Ritchie, Raymond J

2015-08-01

Fermentative breakdown of food waste seems a plausible alternative to feeding food waste to pigs, incineration or garbage disposal in tourist areas. We determined the optimal conditions for the fermentative breakdown of food waste using yeast (Saccharomyces cerevisiae) in incubations up to 30days. Yeast efficiently broke down food waste with food waste loadings as high as 700g FW/l. The optimum inoculation was ≈46×10(6)cells/l of culture with a 40°C optimum (25-40°C). COD and BOD were reduced by ≈30-50%. Yeast used practically all the available sugars and reduced proteins and lipids by ≈50%. Yeast was able to metabolize lipids much better than expected. Starch was mobilized after very long term incubations (>20days). Yeast was effective in breaking down the organic components of food waste but CO2 gas and ethanol production (≈1.5%) were only significant during the first 7days of incubations. Copyright © 2015 Elsevier Ltd. All rights reserved.

Nectar yeasts: a natural microcosm for ecology.

PubMed

Chappell, Callie R; Fukami, Tadashi

2018-06-01

The species of yeasts that colonize floral nectar can modify the mutualistic relationships between plants and pollinators by changing the chemical properties of nectar. Recent evidence supporting this possibility has led to increased interest among ecologists in studying these fungi as well as the bacteria that interact with them in nectar. Although not fully explored, nectar yeasts also constitute a promising natural microcosm that can be used to facilitate development of general ecological theory. We discuss the methodological and conceptual advantages of using nectar yeasts from this perspective, including simplicity of communities, tractability of dispersal, replicability of community assembly, and the ease with which the mechanisms of species interactions can be studied in complementary experiments conducted in the field and the laboratory. To illustrate the power of nectar yeasts as a study system, we discuss several topics in community ecology, including environmental filtering, priority effects, and metacommunity dynamics. An exciting new direction is to integrate metagenomics and comparative genomics into nectar yeast research to address these fundamental ecological topics. Copyright © 2018 John Wiley & Sons, Ltd.

Kinetics of growth and sugar consumption in yeasts.

PubMed

van Dijken, J P; Weusthuis, R A; Pronk, J T

1993-01-01

An overview is presented of the steady- and transient state kinetics of growth and formation of metabolic byproducts in yeasts. Saccharomyces cerevisiae is strongly inclined to perform alcoholic fermentation. Even under fully aerobic conditions, ethanol is produced by this yeast when sugars are present in excess. This so-called 'Crabtree effect' probably results from a multiplicity of factors, including the mode of sugar transport and the regulation of enzyme activities involved in respiration and alcoholic fermentation. The Crabtree effect in S. cerevisiae is not caused by an intrinsic inability to adjust its respiratory activity to high glycolytic fluxes. Under certain cultivation conditions, for example during growth in the presence of weak organic acids, very high respiration rates can be achieved by this yeast. S. cerevisiae is an exceptional yeast since, in contrast to most other species that are able to perform alcoholic fermentation, it can grow under strictly anaerobic conditions. 'Non-Saccharomyces' yeasts require a growth-limiting supply of oxygen (i.e. oxygen-limited growth conditions) to trigger alcoholic fermentation. However, complete absence of oxygen results in cessation of growth and therefore, ultimately, of alcoholic fermentation. Since it is very difficult to reproducibly achieve the right oxygen dosage in large-scale fermentations, non-Saccharomyces yeasts are therefore not suitable for large-scale alcoholic fermentation of sugar-containing waste streams. In these yeasts, alcoholic fermentation is also dependent on the type of sugar. For example, the facultatively fermentative yeast Candida utilis does not ferment maltose, not even under oxygen-limited growth conditions, although this disaccharide supports rapid oxidative growth.

The ecology of the Drosophila-yeast mutualism in wineries

PubMed Central

2018-01-01

The fruit fly, Drosophila melanogaster, is preferentially found on fermenting fruits. The yeasts that dominate the microbial communities of these substrates are the primary food source for developing D. melanogaster larvae, and adult flies manifest a strong olfactory system-mediated attraction for the volatile compounds produced by these yeasts during fermentation. Although most work on this interaction has focused on the standard laboratory yeast Saccharomyces cerevisiae, a wide variety of other yeasts naturally ferment fallen fruit. Here we address the open question of whether D. melanogaster preferentially associates with distinct yeasts in different, closely-related environments. We characterized the spatial and temporal dynamics of Drosophila-associated fungi in Northern California wineries that use organic grapes and natural fermentation using high-throughput, short-amplicon sequencing. We found that there is nonrandom structure in the fungal communities that are vectored by flies both between and within vineyards. Within wineries, the fungal communities associated with flies in cellars, fermentation tanks, and pomace piles are distinguished by varying abundances of a small number of yeast species. To investigate the origins of this structure, we assayed Drosophila attraction to, oviposition on, larval development in, and longevity when consuming the yeasts that distinguish vineyard microhabitats from each other. We found that wild fly lines did not respond differentially to the yeast species that distinguish winery habitats in habitat specific manner. Instead, this subset of yeast shares traits that make them attractive to and ensure their close association with Drosophila. PMID:29768432

The ecology of the Drosophila-yeast mutualism in wineries.

PubMed

Quan, Allison S; Eisen, Michael B

2018-01-01

The fruit fly, Drosophila melanogaster, is preferentially found on fermenting fruits. The yeasts that dominate the microbial communities of these substrates are the primary food source for developing D. melanogaster larvae, and adult flies manifest a strong olfactory system-mediated attraction for the volatile compounds produced by these yeasts during fermentation. Although most work on this interaction has focused on the standard laboratory yeast Saccharomyces cerevisiae, a wide variety of other yeasts naturally ferment fallen fruit. Here we address the open question of whether D. melanogaster preferentially associates with distinct yeasts in different, closely-related environments. We characterized the spatial and temporal dynamics of Drosophila-associated fungi in Northern California wineries that use organic grapes and natural fermentation using high-throughput, short-amplicon sequencing. We found that there is nonrandom structure in the fungal communities that are vectored by flies both between and within vineyards. Within wineries, the fungal communities associated with flies in cellars, fermentation tanks, and pomace piles are distinguished by varying abundances of a small number of yeast species. To investigate the origins of this structure, we assayed Drosophila attraction to, oviposition on, larval development in, and longevity when consuming the yeasts that distinguish vineyard microhabitats from each other. We found that wild fly lines did not respond differentially to the yeast species that distinguish winery habitats in habitat specific manner. Instead, this subset of yeast shares traits that make them attractive to and ensure their close association with Drosophila.

Improving industrial yeast strains: exploiting natural and artificial diversity.

PubMed

Steensels, Jan; Snoek, Tim; Meersman, Esther; Picca Nicolino, Martina; Voordeckers, Karin; Verstrepen, Kevin J

2014-09-01

Yeasts have been used for thousands of years to make fermented foods and beverages, such as beer, wine, sake, and bread. However, the choice for a particular yeast strain or species for a specific industrial application is often based on historical, rather than scientific grounds. Moreover, new biotechnological yeast applications, such as the production of second-generation biofuels, confront yeast with environments and challenges that differ from those encountered in traditional food fermentations. Together, this implies that there are interesting opportunities to isolate or generate yeast variants that perform better than the currently used strains. Here, we discuss the different strategies of strain selection and improvement available for both conventional and nonconventional yeasts. Exploiting the existing natural diversity and using techniques such as mutagenesis, protoplast fusion, breeding, genome shuffling and directed evolution to generate artificial diversity, or the use of genetic modification strategies to alter traits in a more targeted way, have led to the selection of superior industrial yeasts. Furthermore, recent technological advances allowed the development of high-throughput techniques, such as 'global transcription machinery engineering' (gTME), to induce genetic variation, providing a new source of yeast genetic diversity. © 2014 The Authors. FEMS Microbiology Reviews published by John Wiley & Sons Ltd on behalf of Federation of European Microbiological Societies.

Ocean mixing beneath Pine Island Glacier ice shelf, West Antarctica

NASA Astrophysics Data System (ADS)

Kimura, Satoshi; Jenkins, Adrian; Dutrieux, Pierre; Forryan, Alexander; Naveira Garabato, Alberto C.; Firing, Yvonne

2016-12-01

Ice shelves around Antarctica are vulnerable to an increase in ocean-driven melting, with the melt rate depending on ocean temperature and the strength of flow inside the ice-shelf cavities. We present measurements of velocity, temperature, salinity, turbulent kinetic energy dissipation rate, and thermal variance dissipation rate beneath Pine Island Glacier ice shelf, West Antarctica. These measurements were obtained by CTD, ADCP, and turbulence sensors mounted on an Autonomous Underwater Vehicle (AUV). The highest turbulent kinetic energy dissipation rate is found near the grounding line. The thermal variance dissipation rate increases closer to the ice-shelf base, with a maximum value found ˜0.5 m away from the ice. The measurements of turbulent kinetic energy dissipation rate near the ice are used to estimate basal melting of the ice shelf. The dissipation-rate-based melt rate estimates is sensitive to the stability correction parameter in the linear approximation of universal function of the Monin-Obukhov similarity theory for stratified boundary layers. We argue that our estimates of basal melting from dissipation rates are within a range of previous estimates of basal melting.

Accuracy Assessment of Recent Global Ocean Tide Models around Antarctica

NASA Astrophysics Data System (ADS)

Lei, J.; Li, F.; Zhang, S.; Ke, H.; Zhang, Q.; Li, W.

2017-09-01

Due to the coverage limitation of T/P-series altimeters, the lack of bathymetric data under large ice shelves, and the inaccurate definitions of coastlines and grounding lines, the accuracy of ocean tide models around Antarctica is poorer than those in deep oceans. Using tidal measurements from tide gauges, gravimetric data and GPS records, the accuracy of seven state-of-the-art global ocean tide models (DTU10, EOT11a, GOT4.8, FES2012, FES2014, HAMTIDE12, TPXO8) is assessed, as well as the most widely-used conventional model FES2004. Four regions (Antarctic Peninsula region, Amery ice shelf region, Filchner-Ronne ice shelf region and Ross ice shelf region) are separately reported. The standard deviations of eight main constituents between the selected models are large in polar regions, especially under the big ice shelves, suggesting that the uncertainty in these regions remain large. Comparisons with in situ tidal measurements show that the most accurate model is TPXO8, and all models show worst performance in Weddell sea and Filchner-Ronne ice shelf regions. The accuracy of tidal predictions around Antarctica is gradually improving.

Atmospheric Change in Antarctica since the 1957--1958 International Geophysical Year

NASA Astrophysics Data System (ADS)

Nicolas, Julien Pierre

The Antarctic Ice Sheet holds a volume of ice and snow equivalent to 55 meters of sea level. The melting of only a relatively small fraction of this volume could have dramatic consequences for populations around the world. With this in mind, the research presented here focuses on two atmospheric variables that are key controls of the state of the ice sheet: its surface mass balance (or net snowfall) and its near-surface air temperature. The analysis aims to understand how these two parameters have changed (if at all) since the 1957-1958 International Geophysical Year (IGY), the start of the instrumental era in Antarctica. Particular attention is given to the part of the continent known as West Antarctica, the most vulnerable to atmospheric and oceanic warming, and the one where rapid glacial change is currently taking place. The research is divided into three parts. The first part uses a set of seven global reanalyses to investigate the changes in Antarctic surface mass balance and Southern Ocean precipitation since 1979 (start of the reanalyses). This investigation is also intended to shed light on the reliability of these reanalyses, which often contained artifacts caused by changes in the observing system, particularly in high southern latitudes. Spurious changes in precipitation are found to various degrees in all data sets but with varying characteristics and origins. According to the two reanalyses deemed most reliable, neither Antarctic surface mass balance nor Southern Ocean precipitation have changed significantly over the past three decades. The second part consists of a multifaceted investigation of the near-surface temperature record from Byrd Station, in central West Antarctica. As the only meteorological record in this region to extend back to the IGY, it is a critical data set, but also one with a complicated history and substantial data gaps. A comprehensive revision of the record is undertaken and a novel approach is used to estimate the missing

Transcriptome sequencing of the Antarctic vascular plant Deschampsia antarctica Desv. under abiotic stress.

PubMed

Lee, Jungeun; Noh, Eun Kyeung; Choi, Hyung-Seok; Shin, Seung Chul; Park, Hyun; Lee, Hyoungseok

2013-03-01

Antarctic hairgrass (Deschampsia antarctica Desv.) is the only natural grass species in the maritime Antarctic. It has been studied as an extremophile that has successfully adapted to marginal land with the harshest environment for terrestrial plants. However, limited genetic research has focused on this species due to the lack of genomic resources. Here, we present the first de novo assembly of its transcriptome by massive parallel sequencing and its expression profile using D. antarctica grown under various stress conditions. Total sequence reads generated by pyrosequencing were assembled into 60,765 unigenes (28,177 contigs and 32,588 singletons). A total of 29,173 unique protein-coding genes were identified based on sequence similarities to known proteins. The combined results from all three stress conditions indicated differential expression of 3,110 genes. Quantitative reverse transcription polymerase chain reaction showed that several well-known stress-responsive genes encoding late embryogenesis abundant protein, dehydrin 1, and ice recrystallization inhibition protein were induced dramatically and that genes encoding U-box-domain-containing protein, electron transfer flavoprotein-ubiquinone, and F-box-containing protein were induced by abiotic stressors in a manner conserved with other plant species. We identified more than 2,000 simple sequence repeats that can be developed as functional molecular markers. This dataset is the most comprehensive transcriptome resource currently available for D. antarctica and is therefore expected to be an important foundation for future genetic studies of grasses and extremophiles.

Non-linear growth in tree ferns, Dicksonia antarctica and Cyathea australis

PubMed Central

Blair, David P.; Blanchard, Wade; Banks, Sam C.; Lindenmayer, David B.

2017-01-01

Tree ferns are an important structural component of forests in many countries. However, because their regeneration is often unrelated to major disturbances, their age is often difficult to determine. In addition, rates of growth may not be uniform, which further complicates attempts to determine their age. In this study, we measured 5 years of growth of Cyathea australis and Dicksonia antarctica after a large wildfire in 2009 in south-eastern Australia. We found growth rates of these two species were unaffected by aspect and elevation but slope had a minor effect with D. antarctica growing 0.3mm faster for each additional degree of slope. Geographic location influenced growth in both species by up to 12 – 14mm/yr. The most consistent factor influencing growth rate, however, was initial height at the time of the 2009 fire; a finding consistent in both species and all geographic locations. For both tree fern species, individuals that were taller at the commencement of the study had greater overall growth for the duration of the study. This effect did not decrease even among the tallest tree ferns in our study (up to 6 metres tall). Overall, Cyathea australis averaged 73 (± 22)mm/year of growth (± 1SD), with the rate increasing 5mm/yr per metre of additional height. Dicksonia antarctica averaged 33 (± 13)mm/year, increasing by 6mm/yr/m. Growth rates dependent on initial height were unexpected and we discuss possible reasons for this finding. Variable growth rates also suggest that common age estimation methods of dividing height by average growth rate are likely to underestimate the age of short tree ferns, while overestimating the age of tall tree ferns, particularly if they have been subject to a fire. PMID:28493884

Non-linear growth in tree ferns, Dicksonia antarctica and Cyathea australis.

PubMed

Blair, David P; Blanchard, Wade; Banks, Sam C; Lindenmayer, David B

2017-01-01

Tree ferns are an important structural component of forests in many countries. However, because their regeneration is often unrelated to major disturbances, their age is often difficult to determine. In addition, rates of growth may not be uniform, which further complicates attempts to determine their age. In this study, we measured 5 years of growth of Cyathea australis and Dicksonia antarctica after a large wildfire in 2009 in south-eastern Australia. We found growth rates of these two species were unaffected by aspect and elevation but slope had a minor effect with D. antarctica growing 0.3mm faster for each additional degree of slope. Geographic location influenced growth in both species by up to 12 - 14mm/yr. The most consistent factor influencing growth rate, however, was initial height at the time of the 2009 fire; a finding consistent in both species and all geographic locations. For both tree fern species, individuals that were taller at the commencement of the study had greater overall growth for the duration of the study. This effect did not decrease even among the tallest tree ferns in our study (up to 6 metres tall). Overall, Cyathea australis averaged 73 (± 22)mm/year of growth (± 1SD), with the rate increasing 5mm/yr per metre of additional height. Dicksonia antarctica averaged 33 (± 13)mm/year, increasing by 6mm/yr/m. Growth rates dependent on initial height were unexpected and we discuss possible reasons for this finding. Variable growth rates also suggest that common age estimation methods of dividing height by average growth rate are likely to underestimate the age of short tree ferns, while overestimating the age of tall tree ferns, particularly if they have been subject to a fire.

Mid-Miocene cooling and the extinction of tundra in continental Antarctica

PubMed Central

Lewis, Adam R.; Marchant, David R.; Ashworth, Allan C.; Hedenäs, Lars; Hemming, Sidney R.; Johnson, Jesse V.; Leng, Melanie J.; Machlus, Malka L.; Newton, Angela E.; Raine, J. Ian; Willenbring, Jane K.; Williams, Mark; Wolfe, Alexander P.

2008-01-01

A major obstacle in understanding the evolution of Cenozoic climate has been the lack of well dated terrestrial evidence from high-latitude, glaciated regions. Here, we report the discovery of exceptionally well preserved fossils of lacustrine and terrestrial organisms from the McMurdo Dry Valleys sector of the Transantarctic Mountains for which we have established a precise radiometric chronology. The fossils, which include diatoms, palynomorphs, mosses, ostracodes, and insects, represent the last vestige of a tundra community that inhabited the mountains before stepped cooling that first brought a full polar climate to Antarctica. Paleoecological analyses, 40Ar/39Ar analyses of associated ash fall, and climate inferences from glaciological modeling together suggest that mean summer temperatures in the region cooled by at least 8°C between 14.07 ± 0.05 Ma and 13.85 ± 0.03 Ma. These results provide novel constraints for the timing and amplitude of middle-Miocene cooling in Antarctica and reveal the ecological legacy of this global climate transition. PMID:18678903

A CCD experimental platform for large telescope in Antarctica based on FPGA

NASA Astrophysics Data System (ADS)

Zhu, Yuhua; Qi, Yongjun

2014-07-01

The CCD , as a detector , is one of the important components of astronomical telescopes. For a large telescope in Antarctica, a set of CCD detector system with large size, high sensitivity and low noise is indispensable. Because of the extremely low temperatures and unattended, system maintenance and software and hardware upgrade become hard problems. This paper introduces a general CCD controller experiment platform, using Field programmable gate array FPGA, which is, in fact, a large-scale field reconfigurable array. Taking the advantage of convenience to modify the system, construction of driving circuit, digital signal processing module, network communication interface, control algorithm validation, and remote reconfigurable module may realize. With the concept of integrated hardware and software, the paper discusses the key technology of building scientific CCD system suitable for the special work environment in Antarctica, focusing on the method of remote reconfiguration for controller via network and then offering a feasible hardware and software solution.

Seasonal variation of seismic ambient noise level at King Sejong Station, Antarctica

NASA Astrophysics Data System (ADS)

Lee, W.; Sheen, D.; Seo, K.; Yun, S.

2009-12-01

The generation of the secondary- or double-frequency (DF) microseisms with dominant frequencies between 0.1 and 0.5 Hz has been explained by nonlinear second-order pressure perturbations on the ocean bottom due to the interference of two ocean waves of equal wavelengths traveling in opposite directions. Korea Polar Research Institute (KOPRI) has been operating a broadband seismic station (KSJ1) at King George Island (KGI), Antarctica, since 2001. Examining the ambient seismic noise level for the period from 2006 to 2008 at KSJ1, we found a significant seasonal variation in the frequency range 0.1-0.5 Hz. Correlation of the DF peaks with significant ocean wave height and peak wave period models indicates that the oceanic infragravity waves in the Drake Passage is a possible source to excite the DF microseisms at KGI. Location of King Sejong Station, Antarctica Seasonal variations of DF peak, significant wave height, and peak wave period

Chromosomal Aneuploidy Improves the Brewing Characteristics of Sake Yeast.

PubMed

Kadowaki, Masafumi; Fujimaru, Yuki; Taguchi, Seiga; Ferdouse, Jannatul; Sawada, Kazutaka; Kimura, Yuta; Terasawa, Yohei; Agrimi, Gennaro; Anai, Toyoaki; Noguchi, Hideki; Toyoda, Atsushi; Fujiyama, Asao; Akao, Takeshi; Kitagaki, Hiroshi

2017-12-15

The effect of chromosomal aneuploidy on the brewing characteristics of brewery yeasts has not been studied. Here we report that chromosomal aneuploidy in sake brewery yeast ( Saccharomyces cerevisiae ) leads to the development of favorable brewing characteristics. We found that pyruvate-underproducing sake yeast, which produces less off-flavor diacetyl, is aneuploid and trisomic for chromosomes XI and XIV. To confirm that this phenotype is due to aneuploidy, we obtained 45 haploids with various chromosomal additions and investigated their brewing profiles. A greater number of chromosomes correlated with a decrease in pyruvate production. Especially, sake yeast haploids with extra chromosomes in addition to chromosome XI produced less pyruvate than euploids. Mitochondrion-related metabolites and intracellular oxygen species in chromosome XI aneuploids were higher than those in euploids, and this effect was canceled in their "petite" strains, suggesting that an increase in chromosomes upregulated mitochondrial activity and decreased pyruvate levels. These findings suggested that an increase in chromosome number, including chromosome XI, in sake yeast haploids leads to pyruvate underproduction through the augmentation of mitochondrial activity. This is the first report proposing that aneuploidy in brewery yeasts improves their brewing profile. IMPORTANCE Chromosomal aneuploidy has not been evaluated in development of sake brewing yeast strains. This study shows the relationship between chromosomal aneuploidy and brewing characteristics of brewery yeast strains. High concentrations of pyruvate during sake storage give rise to α-acetolactate and, in turn, to high concentrations of diacetyl, which is considered an off-flavor. It was demonstrated that pyruvate-underproducing sake yeast is trisomic for chromosome XI and XIV. Furthermore, sake yeast haploids with extra chromosomes produced reduced levels of pyruvate and showed metabolic processes characteristic of

Chromosomal Aneuploidy Improves the Brewing Characteristics of Sake Yeast

PubMed Central

Kadowaki, Masafumi; Fujimaru, Yuki; Taguchi, Seiga; Ferdouse, Jannatul; Sawada, Kazutaka; Kimura, Yuta; Terasawa, Yohei; Agrimi, Gennaro; Anai, Toyoaki; Noguchi, Hideki; Toyoda, Atsushi; Fujiyama, Asao; Akao, Takeshi

2017-01-01

ABSTRACT The effect of chromosomal aneuploidy on the brewing characteristics of brewery yeasts has not been studied. Here we report that chromosomal aneuploidy in sake brewery yeast (Saccharomyces cerevisiae) leads to the development of favorable brewing characteristics. We found that pyruvate-underproducing sake yeast, which produces less off-flavor diacetyl, is aneuploid and trisomic for chromosomes XI and XIV. To confirm that this phenotype is due to aneuploidy, we obtained 45 haploids with various chromosomal additions and investigated their brewing profiles. A greater number of chromosomes correlated with a decrease in pyruvate production. Especially, sake yeast haploids with extra chromosomes in addition to chromosome XI produced less pyruvate than euploids. Mitochondrion-related metabolites and intracellular oxygen species in chromosome XI aneuploids were higher than those in euploids, and this effect was canceled in their “petite” strains, suggesting that an increase in chromosomes upregulated mitochondrial activity and decreased pyruvate levels. These findings suggested that an increase in chromosome number, including chromosome XI, in sake yeast haploids leads to pyruvate underproduction through the augmentation of mitochondrial activity. This is the first report proposing that aneuploidy in brewery yeasts improves their brewing profile. IMPORTANCE Chromosomal aneuploidy has not been evaluated in development of sake brewing yeast strains. This study shows the relationship between chromosomal aneuploidy and brewing characteristics of brewery yeast strains. High concentrations of pyruvate during sake storage give rise to α-acetolactate and, in turn, to high concentrations of diacetyl, which is considered an off-flavor. It was demonstrated that pyruvate-underproducing sake yeast is trisomic for chromosome XI and XIV. Furthermore, sake yeast haploids with extra chromosomes produced reduced levels of pyruvate and showed metabolic processes characteristic

Macroalgae Extracts From Antarctica Have Antimicrobial and Anticancer Potential

PubMed Central

Martins, Rosiane M.; Nedel, Fernanda; Guimarães, Victoria B. S.; da Silva, Adriana F.; Colepicolo, Pio; de Pereira, Claudio M. P.; Lund, Rafael G.

2018-01-01

Background: Macroalgae are sources of bioactive compounds due to the large number of secondary metabolites they synthesize. The Antarctica region is characterized by extreme weather conditions and abundant aggregations of macroalgae. However, current knowledge on their biodiversity and their potential for bio-prospecting is still fledging. This study evaluates the antimicrobial and cytotoxic activity of different extracts of four macroalgae (Cystosphaera jacquinotii, Iridaea cordata, Himantothallus grandifolius, and Pyropia endiviifolia) from the Antarctic region against cancer and non-cancer cell lines. Methods: The antimicrobial activity of macroalgae was evaluated by the broth microdilution method. Extracts were assessed against Staphylococcus aureus ATCC 19095, Enterococcus faecalis ATCC 4083, Escherichia coli ATCC29214, Pseudomonas aeruginosa ATCC 9027, Candida albicans ATCC 62342, and the clinical isolates from the human oral cavity, namely, C. albicans (3), C. parapsilosis, C. glabrata, C. lipolytica, and C. famata. Cytotoxicity against human epidermoid carcinoma (A-431) and mouse embryonic fibroblast (NIH/3T3) cell lines was evaluated with MTT colorimetric assay. Results: An ethyl acetate extract of H. grandifolius showed noticeable antifungal activity against all fungal strains tested, including fluconazole-resistant samples. Cytotoxicity investigation with a cancer cell line revealed that the ethyl acetate extract of I. cordata was highly cytotoxic against A-431 cancer cell line, increasing the inhibitory ratio to 91.1 and 95.6% after 24 and 48 h exposure, respectively, for a concentration of 500 μg mL−1. Most of the algal extracts tested showed little or no cytotoxicity against fibroblasts. Conclusion: Data suggest that macroalgae extracts from Antarctica may represent a source of therapeutic agents. HIGHLIGHTS Different macroalgae samples from Antarctica were collected and the lyophilized biomass of each macroalgae was extracted sequentially with

21 CFR 172.325 - Bakers yeast protein.

Code of Federal Regulations, 2010 CFR

2010-04-01

... harmful microbial toxin. (d) The ingredient is used in food as a nutrient supplement as defined in § 170.3... Special Dietary and Nutritional Additives § 172.325 Bakers yeast protein. Bakers yeast protein may be...

21 CFR 172.325 - Bakers yeast protein.

Code of Federal Regulations, 2012 CFR

2012-04-01

... harmful microbial toxin. (d) The ingredient is used in food as a nutrient supplement as defined in § 170.3... Special Dietary and Nutritional Additives § 172.325 Bakers yeast protein. Bakers yeast protein may be...

21 CFR 172.325 - Bakers yeast protein.

Code of Federal Regulations, 2011 CFR

2011-04-01

... harmful microbial toxin. (d) The ingredient is used in food as a nutrient supplement as defined in § 170.3... Special Dietary and Nutritional Additives § 172.325 Bakers yeast protein. Bakers yeast protein may be...

21 CFR 172.325 - Bakers yeast protein.

Code of Federal Regulations, 2013 CFR

2013-04-01

... harmful microbial toxin. (d) The ingredient is used in food as a nutrient supplement as defined in § 170.3... Special Dietary and Nutritional Additives § 172.325 Bakers yeast protein. Bakers yeast protein may be...

Mammalian amyloidogenic proteins promote prion nucleation in yeast.

PubMed

Chandramowlishwaran, Pavithra; Sun, Meng; Casey, Kristin L; Romanyuk, Andrey V; Grizel, Anastasiya V; Sopova, Julia V; Rubel, Aleksandr A; Nussbaum-Krammer, Carmen; Vorberg, Ina M; Chernoff, Yury O

2018-03-02

Fibrous cross-β aggregates (amyloids) and their transmissible forms (prions) cause diseases in mammals (including humans) and control heritable traits in yeast. Initial nucleation of a yeast prion by transiently overproduced prion-forming protein or its (typically, QN-rich) prion domain is efficient only in the presence of another aggregated (in most cases, QN-rich) protein. Here, we demonstrate that a fusion of the prion domain of yeast protein Sup35 to some non-QN-rich mammalian proteins, associated with amyloid diseases, promotes nucleation of Sup35 prions in the absence of pre-existing aggregates. In contrast, both a fusion of the Sup35 prion domain to a multimeric non-amyloidogenic protein and the expression of a mammalian amyloidogenic protein that is not fused to the Sup35 prion domain failed to promote prion nucleation, further indicating that physical linkage of a mammalian amyloidogenic protein to the prion domain of a yeast protein is required for the nucleation of a yeast prion. Biochemical and cytological approaches confirmed the nucleation of protein aggregates in the yeast cell. Sequence alterations antagonizing or enhancing amyloidogenicity of human amyloid-β (associated with Alzheimer's disease) and mouse prion protein (associated with prion diseases), respectively, antagonized or enhanced nucleation of a yeast prion by these proteins. The yeast-based prion nucleation assay, developed in our work, can be employed for mutational dissection of amyloidogenic proteins. We anticipate that it will aid in the identification of chemicals that influence initial amyloid nucleation and in searching for new amyloidogenic proteins in a variety of proteomes. © 2018 by The American Society for Biochemistry and Molecular Biology, Inc.

Inventions on baker's yeast storage and activation at the bakery plant.

PubMed

Gélinas, Pierre

2010-01-01

Baker's yeast is the gas-forming ingredient in bakery products. Methods have been invented to properly handle baker's yeast and optimize its activity at the bakery plant. Over the years, incentives for inventions on yeast storage and activation have greatly changed depending on trends in the baking industry. For example, retailer's devices for cutting bulk pressed yeast and techniques for activating dry yeast have now lost their importance. Review of patents for invention indicates that activation of baker's yeast activity has been a very important issue for bakers, for example, with baking ingredients called yeast foods. In the recent years and especially for highly automated bakeries, interest has moved to equipments and processes for optimized storage of liquid cream yeast to thoroughly control dough fermentation and bread quality.

Guidelines and recommendations on yeast cell death nomenclature.

PubMed

Carmona-Gutierrez, Didac; Bauer, Maria Anna; Zimmermann, Andreas; Aguilera, Andrés; Austriaco, Nicanor; Ayscough, Kathryn; Balzan, Rena; Bar-Nun, Shoshana; Barrientos, Antonio; Belenky, Peter; Blondel, Marc; Braun, Ralf J; Breitenbach, Michael; Burhans, William C; Büttner, Sabrina; Cavalieri, Duccio; Chang, Michael; Cooper, Katrina F; Côrte-Real, Manuela; Costa, Vítor; Cullin, Christophe; Dawes, Ian; Dengjel, Jörn; Dickman, Martin B; Eisenberg, Tobias; Fahrenkrog, Birthe; Fasel, Nicolas; Fröhlich, Kai-Uwe; Gargouri, Ali; Giannattasio, Sergio; Goffrini, Paola; Gourlay, Campbell W; Grant, Chris M; Greenwood, Michael T; Guaragnella, Nicoletta; Heger, Thomas; Heinisch, Jürgen; Herker, Eva; Herrmann, Johannes M; Hofer, Sebastian; Jiménez-Ruiz, Antonio; Jungwirth, Helmut; Kainz, Katharina; Kontoyiannis, Dimitrios P; Ludovico, Paula; Manon, Stéphen; Martegani, Enzo; Mazzoni, Cristina; Megeney, Lynn A; Meisinger, Chris; Nielsen, Jens; Nyström, Thomas; Osiewacz, Heinz D; Outeiro, Tiago F; Park, Hay-Oak; Pendl, Tobias; Petranovic, Dina; Picot, Stephane; Polčic, Peter; Powers, Ted; Ramsdale, Mark; Rinnerthaler, Mark; Rockenfeller, Patrick; Ruckenstuhl, Christoph; Schaffrath, Raffael; Segovia, Maria; Severin, Fedor F; Sharon, Amir; Sigrist, Stephan J; Sommer-Ruck, Cornelia; Sousa, Maria João; Thevelein, Johan M; Thevissen, Karin; Titorenko, Vladimir; Toledano, Michel B; Tuite, Mick; Vögtle, F-Nora; Westermann, Benedikt; Winderickx, Joris; Wissing, Silke; Wölfl, Stefan; Zhang, Zhaojie J; Zhao, Richard Y; Zhou, Bing; Galluzzi, Lorenzo; Kroemer, Guido; Madeo, Frank

2018-01-01

Elucidating the biology of yeast in its full complexity has major implications for science, medicine and industry. One of the most critical processes determining yeast life and physiology is cel-lular demise. However, the investigation of yeast cell death is a relatively young field, and a widely accepted set of concepts and terms is still missing. Here, we propose unified criteria for the defi-nition of accidental, regulated, and programmed forms of cell death in yeast based on a series of morphological and biochemical criteria. Specifically, we provide consensus guidelines on the differ-ential definition of terms including apoptosis, regulated necrosis, and autophagic cell death, as we refer to additional cell death rou-tines that are relevant for the biology of (at least some species of) yeast. As this area of investigation advances rapidly, changes and extensions to this set of recommendations will be implemented in the years to come. Nonetheless, we strongly encourage the au-thors, reviewers and editors of scientific articles to adopt these collective standards in order to establish an accurate framework for yeast cell death research and, ultimately, to accelerate the pro-gress of this vibrant field of research.

Guidelines and recommendations on yeast cell death nomenclature

PubMed Central

Carmona-Gutierrez, Didac; Bauer, Maria Anna; Zimmermann, Andreas; Aguilera, Andrés; Austriaco, Nicanor; Ayscough, Kathryn; Balzan, Rena; Bar-Nun, Shoshana; Barrientos, Antonio; Belenky, Peter; Blondel, Marc; Braun, Ralf J.; Breitenbach, Michael; Burhans, William C.; Büttner, Sabrina; Cavalieri, Duccio; Chang, Michael; Cooper, Katrina F.; Côrte-Real, Manuela; Costa, Vítor; Cullin, Christophe; Dawes, Ian; Dengjel, Jörn; Dickman, Martin B.; Eisenberg, Tobias; Fahrenkrog, Birthe; Fasel, Nicolas; Fröhlich, Kai-Uwe; Gargouri, Ali; Giannattasio, Sergio; Goffrini, Paola; Gourlay, Campbell W.; Grant, Chris M.; Greenwood, Michael T.; Guaragnella, Nicoletta; Heger, Thomas; Heinisch, Jürgen; Herker, Eva; Herrmann, Johannes M.; Hofer, Sebastian; Jiménez-Ruiz, Antonio; Jungwirth, Helmut; Kainz, Katharina; Kontoyiannis, Dimitrios P.; Ludovico, Paula; Manon, Stéphen; Martegani, Enzo; Mazzoni, Cristina; Megeney, Lynn A.; Meisinger, Chris; Nielsen, Jens; Nyström, Thomas; Osiewacz, Heinz D.; Outeiro, Tiago F.; Park, Hay-Oak; Pendl, Tobias; Petranovic, Dina; Picot, Stephane; Polčic, Peter; Powers, Ted; Ramsdale, Mark; Rinnerthaler, Mark; Rockenfeller, Patrick; Ruckenstuhl, Christoph; Schaffrath, Raffael; Segovia, Maria; Severin, Fedor F.; Sharon, Amir; Sigrist, Stephan J.; Sommer-Ruck, Cornelia; Sousa, Maria João; Thevelein, Johan M.; Thevissen, Karin; Titorenko, Vladimir; Toledano, Michel B.; Tuite, Mick; Vögtle, F.-Nora; Westermann, Benedikt; Winderickx, Joris; Wissing, Silke; Wölfl, Stefan; Zhang, Zhaojie J.; Zhao, Richard Y.; Zhou, Bing; Galluzzi, Lorenzo; Kroemer, Guido; Madeo, Frank

2018-01-01

Elucidating the biology of yeast in its full complexity has major implications for science, medicine and industry. One of the most critical processes determining yeast life and physiology is cellular demise. However, the investigation of yeast cell death is a relatively young field, and a widely accepted set of concepts and terms is still missing. Here, we propose unified criteria for the definition of accidental, regulated, and programmed forms of cell death in yeast based on a series of morphological and biochemical criteria. Specifically, we provide consensus guidelines on the differential definition of terms including apoptosis, regulated necrosis, and autophagic cell death, as we refer to additional cell death routines that are relevant for the biology of (at least some species of) yeast. As this area of investigation advances rapidly, changes and extensions to this set of recommendations will be implemented in the years to come. Nonetheless, we strongly encourage the authors, reviewers and editors of scientific articles to adopt these collective standards in order to establish an accurate framework for yeast cell death research and, ultimately, to accelerate the progress of this vibrant field of research. PMID:29354647

Effects of temperature and water availability on light energy utilization in photosynthetic processes of Deschampsia antarctica.

PubMed

Sáez, Patricia L; Rivera, Betsy K; Ramírez, Constanza F; Vallejos, Valentina; Cavieres, Lohengrin A; Corcuera, Luis J; Bravo, León A

2018-03-30

Regional climate change in Antarctica would favor the carbon assimilation of Antarctic vascular plants, because rising temperatures are approaching their photosynthetic optimum (10-19°C). This could be detrimental for photoprotection mechanisms, mainly those associated with thermal dissipation, making plants more susceptible to eventual drought predicted by climate change models. With the purpose to study the effect of temperature and water availability on light energy utilization and putative adjustments in photoprotective mechanisms of Deschampsia antarctica Desv., plants were collected from two Antarctic provenances: King George Island and Lagotellerie Island. Plants were cultivated at 5°, 10° and 16°C under well-watered (WW) and water-deficit (WD, at 35% of the field capacity) conditions. Chlorophyll fluorescence, pigment content, and de-epoxidation state were evaluated. Regardless of provenances, D. antarctica showed similar morphological, biochemical, and functional responses to growth temperature. Higher temperature triggered an increase in photochemical activity (i.e. ETR, and photochemical quenching), and a decrease in thermal dissipation capacity (i.e. lower xanthophyll pool, Chl a/b, and β carotene/neoxanthin ratios). LMA was reduced at higher temperature, and was only affected in plants exposed to WD at 16°C and exhibiting lower ETR and chlorophylls. D. antarctica is adapted to frequent freezing events, which may induce a form of physiological water stress. Photoprotective responses observed under WD contribute to maintain a stable photochemical activity. Thus, it is possible that short-term temperature increases could favor the photochemical activity of this species. However, long-term effects will depend on the magnitude of changes and the plant's ability to adjust to new growth temperature. This article is protected by copyright. All rights reserved.

Applications of yeast surface display for protein engineering

PubMed Central

Cherf, Gerald M.; Cochran, Jennifer R.

2015-01-01

The method of displaying recombinant proteins on the surface of Saccharomyces cerevisiae via genetic fusion to an abundant cell wall protein, a technology known as yeast surface display, or simply, yeast display, has become a valuable protein engineering tool for a broad spectrum of biotechnology and biomedical applications. This review focuses on the use of yeast display for engineering protein affinity, stability, and enzymatic activity. Strategies and examples for each protein engineering goal are discussed. Additional applications of yeast display are also briefly presented, including protein epitope mapping, identification of protein-protein interactions, and uses of displayed proteins in industry and medicine. PMID:26060074

The primary structures of two yeast enolase genes. Homology between the 5' noncoding flanking regions of yeast enolase and glyceraldehyde-3-phosphate dehydrogenase genes.

PubMed

Holland, M J; Holland, J P; Thill, G P; Jackson, K A

1981-02-10

Segments of yeast genomic DNA containing two enolase structural genes have been isolated by subculture cloning procedures using a cDNA hybridization probe synthesized from purified yeast enolase mRNA. Based on restriction endonuclease and transcriptional maps of these two segments of yeast DNA, each hybrid plasmid contains a region of extensive nucleotide sequence homology which forms hybrids with the cDNA probe. The DNA sequences which flank this homologous region in the two hybrid plasmids are nonhomologous indicating that these sequences are nontandemly repeated in the yeast genome. The complete nucleotide sequence of the coding as well as the flanking noncoding regions of these genes has been determined. The amino acid sequence predicted from one reading frame of both structural genes is extremely similar to that determined for yeast enolase (Chin, C. C. Q., Brewer, J. M., Eckard, E., and Wold, F. (1981) J. Biol. Chem. 256, 1370-1376), confirming that these isolated structural genes encode yeast enolase. The nucleotide sequences of the coding regions of the genes are approximately 95% homologous, and neither gene contains an intervening sequence. Codon utilization in the enolase genes follows the same biased pattern previously described for two yeast glyceraldehyde-3-phosphate dehydrogenase structural genes (Holland, J. P., and Holland, M. J. (1980) J. Biol. Chem. 255, 2596-2605). DNA blotting analysis confirmed that the isolated segments of yeast DNA are colinear with yeast genomic DNA and that there are two nontandemly repeated enolase genes per haploid yeast genome. The noncoding portions of the two enolase genes adjacent to the initiation and termination codons are approximately 70% homologous and contain sequences thought to be involved in the synthesis and processing messenger RNA. Finally there are regions of extensive homology between the two enolase structural genes and two yeast glyceraldehyde-3-phosphate dehydrogenase structural genes within the 5

It Happened in Antarctica. A Collection of Observations Requiring Scientific Explanations.

ERIC Educational Resources Information Center

Yaxley, Murray

There are many reasons for studying Antarctica. It is the key element in the world's climate. Some of the secrets of the earth's past are locked beneath its icecap. It has a fascinating physical environment and a unique and fragile ecosystem. It is a frontier of scientific research and technological development. Its history is an important and…

[The yeast biofilm in human medicine].

PubMed

Růzicka, Filip; Holá, Veronika; Votava, Miroslav

2007-08-01

In recent years, the role of Candida yeasts as causative agents of nosocomial infections has increased. One of the important virulence factors contributing to the development of such infections is biofilm production. This virulence factor enables yeast to colonize both native surfaces and artificial implants. The most common sources of infection are patients themselves, in particular the gastrointestinal tract and skin. The vectors of exogenous yeast infections are predominantly the hands of the health personnel and contaminated medical instruments. The adhesion of yeasts to the implant surfaces is determined both by implant surface and yeast characteristics. This is followed by proliferation and production of microcolonies and extracellular matrix. The final biofilm structure is also influenced by the production of hyphae and pseudohyphae. The entire process of biofilm production is controlled by numerous regulatory systems, with the key role being played by the quorum sensing system. Like the adhered bacterial cultures, candidas growing in the form of a biofilm are highly resistant to antimicrobial therapy. Resistance of yeast biofilms to antifungals is a complex process with multiple contributing factors. These are especially increased gene expression (e.g. genes encoding the so called multidrug efflux pumps), limited penetration of substances through the extracellular matrix, inhibited cell growth and altered microenvironment in deeper biofilm layers. The concentrations of antifungals able to effectively affect the biofilm cells exceed, by several orders of magnitude, the values of conventionally determined MICs. High biofilm resistance results in ineffective antifungal therapy of biofilm infections. Therefore, if possible, the colonized implant should be removed. Conservative therapy should involve antifungals with a proven effect on the biofilm (e.g. caspofungin). The most effective measure in fighting biofilm infections is prevention, especially adhering to

Heavy metal removal by caustic-treated yeast immobilized in alginate

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lu, Y.; Wilkins, E.

1995-12-31

Saccharomyces cerevisiae yeast biomass was treated with hot alkali to increase its biosorption capacity for heavy metals and then was immobilized in alginate gel. Biosorption capacities for Cu{sup 2+}, Cd{sup 2+}, and Zn{sup 2+} on alginate gel, native yeast, native yeast immobilized in alginate gel, and caustic-treated yeast immobilized in alginate gel were all compared. Immobilized yeasts could be reactivated and reused in a manner similar to the ion exchange resins. Immobilized caustic-treated yeast has high heavy metal biosorption capacity and high metal removal efficiency in a rather wide acidic pH region. The biosorption isotherm of immobilized caustic-treated yeast wasmore » studied, and empirical equations were obtained. The initial pH of polluted water affected the metal removal efficiency significantly, and the equilibrium biosorption capacity seemed to be temperature independent at lower initial metal concentrations.« less

A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human.

PubMed