Shifts in Climate Foster Exceptional Opportunities for Species Radiation: The Case of South African Geraniums

PubMed Central

Martínez-Cabrera, Hugo I.; Peres-Neto, Pedro R.

2013-01-01

Climate change is often assumed to be a major driver of biodiversity loss. However, it can also set the stage for novel diversification in lineages with the evolutionary ability to colonize new environments. Here we tested if the extraordinary evolutionary success of the genus Pelargonium was related to the ability of its species to capitalize on the climate niche variation produced by the historical changes in southern Africa. We evaluated the relationship between rates of climate niche evolution and diversification rates in the main Pelargonium lineages and disentangled the roles of deep and recent historical events in the modification of species niches. Pelargonium clades exhibiting higher ecological differentiation along summer precipitation (SPP) gradients also experienced higher diversification rates. Faster rates of niche differentiation in spatially structured variables, along with lower levels of niche overlap among closely related species, suggest recent modification in species niches (e.g. dispersal or range shift) and niche lability. We suggest that highly structured SPP gradients established during the aridification process within southern Africa, in concert with niche lability and low niche overlap, contributed to species divergence. These factors are likely to be responsible for the extensive diversification of other lineages in this diversity hot spot. PMID:24358250

Could 1,3 dimethylamylamine (DMAA) in food supplements have a natural origin?

PubMed

Di Lorenzo, Chiara; Moro, Enzo; Dos Santos, Ariana; Uberti, Francesca; Restani, Patrizia

2013-02-01

1,3 dimethylamylamine or methylexaneamine (DMAA) is a synthetic pharmaceutical patented in the 1940s as a nasal decongestant which can be used as a recreational stimulant. Alleged to occur in nature, DMAA has become a widely used ingredient in sports food supplements, despite its status as a doping agent and concerns over its safety. There is now some doubt as to whether it can be sourced naturally or whether it actually occurs naturally at all. The presence of DMAA was investigated by high performance liquid chromatography (HPLC) in extracts of the leaves and stems of four geranium species and of three well-known cultivars. The amounts of DMAA in commercial geranium (Pelargonium graveolens) oil and the leading sports supplement which uses the ingredient were also measured. DMAA was not found in any of the leaves or stems or in the commercial geranium oil included in this study. Approximately 30 mg per daily dose was found in the food supplement. Therefore, the amount of DMAA found in the supplement is most unlikely to have been sourced in nature, and it must be concluded that synthetic DMAA, known to be capable of causing severe adverse physiological effects, has been added. Copyright © 2012 John Wiley & Sons, Ltd.

Fertilization and Colors of Plastic Mulch Affect Biomass and Essential Oil of Sweet-Scented Geranium

PubMed Central

Silva, Anderson de Carvalho; dos Santos, Wallace Melo; Prata, Paloma Santana; Alves, Péricles Barreto

2014-01-01

Sweet-scented geranium (Pelargonium graveolens L'Hér), a plant belonging to the Geraniaceae family, has medicinal and aromatic properties and is widely used in the cosmetic, soap, perfume, aromatherapy, and food industries. The aim of this study was to evaluate the influence of fertilization and the use of different colors of plastic mulch on sweet-scented geranium biomass and essential oil. Three colors of plastic mulch (black, white, and silver-colored) and a control without plastic mulch were assessed along with three fertilizers (20,000 L·ha−1 of cattle manure; 1,000 kg·ha−1 of NPK 3-12-6; and 20,000 L·ha−1 of cattle manure + 1,000 kg·ha−1 of NPK 3-12-6 fertilizer) and a control without fertilizer. The absence of a soil cover negatively influenced the agronomical variables, while coverage with plastic mulch was associated with increased biomass. The use of fertilizer had no effect on the evaluated agronomic variables. When cattle manure and NPK 3-12-6 were used together, combined with white or black plastic mulch, the highest yields of essential oil were obtained. For the silver-colored plastic mulch, higher amounts of essential oil (6,9-guaiadien) were obtained with mineral fertilizer. PMID:24757440

Transcriptome mining and in silico structural and functional analysis of ascorbic acid and tartaric acid biosynthesis pathway enzymes in rose-scanted geranium.

PubMed

Narnoliya, Lokesh K; Sangwan, Rajender S; Singh, Sudhir P

2018-06-01

Rose-scented geranium (Pelargonium sp.) is widely known as aromatic and medicinal herb, accumulating specialized metabolites of high economic importance, such as essential oils, ascorbic acid, and tartaric acid. Ascorbic acid and tartaric acid are multifunctional metabolites of human value to be used as vital antioxidants and flavor enhancing agents in food products. No information is available related to the structural and functional properties of the enzymes involved in ascorbic acid and tartaric acid biosynthesis in rose-scented geranium. In the present study, transcriptome mining was done to identify full-length genes, followed by their bioinformatic and molecular modeling investigations and understanding of in silico structural and functional properties of these enzymes. Evolutionary conserved domains were identified in the pathway enzymes. In silico physicochemical characterization of the catalytic enzymes revealed isoelectric point (pI), instability index, aliphatic index, and grand average hydropathy (GRAVY) values of the enzymes. Secondary structural prediction revealed abundant proportion of alpha helix and random coil confirmations in the pathway enzymes. Three-dimensional homology models were developed for these enzymes. The predicted structures showed significant structural similarity with their respective templates in root mean square deviation analysis. Ramachandran plot analysis of the modeled enzymes revealed that more than 84% of the amino acid residues were within the favored regions. Further, functionally important residues were identified corresponding to catalytic sites located in the enzymes. To, our best knowledge, this is the first report which provides a foundation on functional annotation and structural determination of ascorbic acid and tartaric acid pathway enzymes in rose-scanted geranium.

De novo transcriptome analysis of rose-scented geranium provides insights into the metabolic specificity of terpene and tartaric acid biosynthesis.

PubMed

Narnoliya, Lokesh K; Kaushal, Girija; Singh, Sudhir P; Sangwan, Rajender S

2017-01-13

Rose-scented geranium (Pelargonium sp.) is a perennial herb that produces a high value essential oil of fragrant significance due to the characteristic compositional blend of rose-oxide and acyclic monoterpenoids in foliage. Recently, the plant has also been shown to produce tartaric acid in leaf tissues. Rose-scented geranium represents top-tier cash crop in terms of economic returns and significance of the plant and plant products. However, there has hardly been any study on its metabolism and functional genomics, nor any genomic expression dataset resource is available in public domain. Therefore, to begin the gains in molecular understanding of specialized metabolic pathways of the plant, de novo sequencing of rose-scented geranium leaf transcriptome, transcript assembly, annotation, expression profiling as well as their validation were carried out. De novo transcriptome analysis resulted a total of 78,943 unique contigs (average length: 623 bp, and N50 length: 752 bp) from 15.44 million high quality raw reads. In silico functional annotation led to the identification of several putative genes representing terpene, ascorbic acid and tartaric acid biosynthetic pathways, hormone metabolism, and transcription factors. Additionally, a total of 6,040 simple sequence repeat (SSR) motifs were identified in 6.8% of the expressed transcripts. The highest frequency of SSR was of tri-nucleotides (50%). Further, transcriptome assembly was validated for randomly selected putative genes by standard PCR-based approach. In silico expression profile of assembled contigs were validated by real-time PCR analysis of selected transcripts. Being the first report on transcriptome analysis of rose-scented geranium the data sets and the leads and directions reflected in this investigation will serve as a foundation for pursuing and understanding molecular aspects of its biology, and specialized metabolic pathways, metabolic engineering, genetic diversity as well as molecular breeding.

Production of engineered long-life and male sterile Pelargonium plants

PubMed Central

2012-01-01

Background Pelargonium is one of the most popular garden plants in the world. Moreover, it has a considerable economic importance in the ornamental plant market. Conventional cross-breeding strategies have generated a range of cultivars with excellent traits. However, gene transfer via Agrobacterium tumefaciens could be a helpful tool to further improve Pelargonium by enabling the introduction of new genes/traits. We report a simple and reliable protocol for the genetic transformation of Pelargonium spp. and the production of engineered long-life and male sterile Pelargonium zonale plants, using the pSAG12::ipt and PsEND1::barnase chimaeric genes respectively. Results The pSAG12::ipt transgenic plants showed delayed leaf senescence, increased branching and reduced internodal length, as compared to control plants. Leaves and flowers of the pSAG12::ipt plants were reduced in size and displayed a more intense coloration. In the transgenic lines carrying the PsEND1::barnase construct no pollen grains were observed in the modified anther structures, which developed instead of normal anthers. The locules of sterile anthers collapsed 3–4 days prior to floral anthesis and, in most cases, the undeveloped anther tissues underwent necrosis. Conclusion The chimaeric construct pSAG12::ipt can be useful in Pelargonium spp. to delay the senescence process and to modify plant architecture. In addition, the use of engineered male sterile plants would be especially useful to produce environmentally friendly transgenic plants carrying new traits by preventing gene flow between the genetically modified ornamentals and related plant species. These characteristics could be of interest, from a commercial point of view, both for pelargonium producers and consumers. PMID:22935247

Production of engineered long-life and male sterile Pelargonium plants.

PubMed

García-Sogo, Begoña; Pineda, Benito; Roque, Edelín; Antón, Teresa; Atarés, Alejandro; Borja, Marisé; Beltrán, José Pío; Moreno, Vicente; Cañas, Luis Antonio

2012-08-31

Pelargonium is one of the most popular garden plants in the world. Moreover, it has a considerable economic importance in the ornamental plant market. Conventional cross-breeding strategies have generated a range of cultivars with excellent traits. However, gene transfer via Agrobacterium tumefaciens could be a helpful tool to further improve Pelargonium by enabling the introduction of new genes/traits. We report a simple and reliable protocol for the genetic transformation of Pelargonium spp. and the production of engineered long-life and male sterile Pelargonium zonale plants, using the pSAG12::ipt and PsEND1::barnase chimaeric genes respectively. The pSAG12::ipt transgenic plants showed delayed leaf senescence, increased branching and reduced internodal length, as compared to control plants. Leaves and flowers of the pSAG12::ipt plants were reduced in size and displayed a more intense coloration. In the transgenic lines carrying the PsEND1::barnase construct no pollen grains were observed in the modified anther structures, which developed instead of normal anthers. The locules of sterile anthers collapsed 3-4 days prior to floral anthesis and, in most cases, the undeveloped anther tissues underwent necrosis. The chimaeric construct pSAG12::ipt can be useful in Pelargonium spp. to delay the senescence process and to modify plant architecture. In addition, the use of engineered male sterile plants would be especially useful to produce environmentally friendly transgenic plants carrying new traits by preventing gene flow between the genetically modified ornamentals and related plant species. These characteristics could be of interest, from a commercial point of view, both for pelargonium producers and consumers.

Testing for non-target effects of spinosad on twospotted spider mites and their predator Phytoseiulus persimilis under greenhouse conditions.

PubMed

Holt, Kiffnie M; Opit, George P; Nechols, James R; Margolies, David C

2006-01-01

The compatibility of the selective insecticide spinosad (Conserve SC), at rates recommended for thrips control in greenhouses, with release of the predatory mite Phytoseiulus persimilis Athias-Henriot (Acari: Phytoseiidae) to control spider mites, was investigated in a crop of ivy geranium Pelargonium peltatum, cultivar 'Amethyst 96.' Plants were inoculated with twospotted spider mites, Tetranychus urticae Koch (Acari: Tetranychidae), 2 weeks before treatments were applied. There were three treatment variables, each at two levels: predators (released or not), spray application (water or Conserve SC at 2 ml/3.79 l), and timing of spray (1 day before or after predators were released). Twospotted spider mite populations then were sampled twice each week over a three-week period. The application or timing of spinosad had no effect on the ability of the predator to reduce the population of spider mites. Spider mite populations in the no-predator treatment continued to expand over the course of the experiment, while those in the predator-release treatment declined. We conclude that P. persimilis can be used in conjunction with spinosad on ivy geraniums without causing obvious detrimental effects to this predator or leading to a reduction in biological control.

Comparison of Photoacoustic Signals in Photosynthetic and Nonphotosynthetic Leaf Tissues of Variegated Pelargonium zonale

NASA Astrophysics Data System (ADS)

Veljović-Jovanović, S.; Vidović, M.; Morina, F.; Prokić, Lj.; Todorović, D. M.

2016-09-01

Green-white variegated leaves of Pelargonium zonale were studied using the photoacoustic method. Our aim was to characterize photosynthetically active green tissue and nonphotosynthetically active white tissue by the photoacoustic amplitude signals. We observed lower stomatal conductance and higher leaf temperature in white tissue than in green tissue. Besides these thermal differences, significantly higher absorbance in green tissue was based on chlorophyll and carotenoids which were absent in white tissue. However, optical properties of epidermal layers of both tissues were equal. The photoacoustic amplitude of white tissue was over four times higher compared to green tissue, which was correlated with lower stomatal conductance. In addition, at frequencies >700 Hz, the significant differences between the photoacoustic signals of green and white tissue were obtained. We identified the photoacoustic signal deriving from photosynthetic oxygen evolution in green tissue, using high intensity of red light modulated at 10 Hz. Moreover, the photoacoustic amplitude of green tissue increased progressively with time which corresponded to the period of induction of photosynthetic oxygen evolution. For the first time, very high frequencies (1 kHz to 5 kHz) were applied on leaf material.

Investigating contact toxicity of Geranium and Artemisia essential oils on Bemisia tabaci Gen.

PubMed

Yarahmadi, Fatemeh; Rajabpour, Ali; Zandi Sohani, Nooshin; Ramezani, Leila

2013-01-01

Sweet potato whitefly, Bemisia tabaci Gen. (B. tabaci), is one of the most important pests of various greenhouse crops in Iran. Nowadays, chemical insecticides are broadly used for control of the pests that causes risk to consumer's health. For the first time, contact toxicity of Pelargonium roseum Andrews and Artemisia sieberi Besser essential oils on B. tabaci and its possible application against the whitefly was evaluated in 2012. Essential oil with concentrations of 2500, 1250, 125, and 12 ppm were used. Infested leaves of greenhouse cucumber were treated by mentioned concentrations. After 24 hours, mortality of B. tabaci was recorded and compared after correcting by Abbot's formula. RESULTS showed that all concentrations of the essential oil could significantly reduce population of B. tabaci compared with the control treatment. Phytotoxicity of the treated leaves were recorded after 24, 48, and 72 hours and compared with the control. Concentrations of 2500, 1250, and 125 ppm caused severe phytotoxicity on greenhouse cucumber leaves and therefore are not suitable for greenhouse application. Phytotoxicity of 12 ppm was relatively low. This data implicated suitable protective effects of the essential oils to the pest infestation. Therefore, essential oils distillated from Geranium and Artemisia could be applied to control B. tabaci in greenhouse cucumber at V/V 12 ppm.

Leaf absorbance and photosynthesis

NASA Technical Reports Server (NTRS)

Schurer, Kees

1994-01-01

The absorption spectrum of a leaf is often thought to contain some clues to the photosynthetic action spectrum of chlorophyll. Of course, absorption of photons is needed for photosynthesis, but the reverse, photosynthesis when there is absorption, is not necessarily true. As a check on the existence of absorption limits we measured spectra for a few different leaves. Two techniques for measuring absorption have been used, viz. the separate determination of the diffuse reflectance and the diffuse transmittance with the leaf at a port of an integrating sphere and the direct determination of the non-absorbed fraction with the leaf in the sphere. In a cross-check both methods yielded the same results for the absorption spectrum. The spectrum of a Fuchsia leaf, covering the short-wave region from 350 to 2500 nm, shows a high absorption in UV, blue and red, the well known dip in the green and a steep fall-off at 700 nm. Absorption drops to virtually zero in the near infrared, with subsequent absorptions, corresponding to the water absorption bands. In more detailed spectra, taken at 5 nm intervals with a 5 nm bandwidth, differences in chlorophyll content show in the different depths of the dip around 550 nm and in a small shift of the absorption edge at 700 nm. Spectra for Geranium (Pelargonium zonale) and Hibiscus (with a higher chlorophyll content) show that the upper limit for photosynthesis can not be much above 700 nm. No evidence, however, is to be seen of a lower limit for photosynthesis and, in fact, some experiments down to 300 nm still did not show a decrease of the absorption although it is well recognized that no photosynthesis results with 300 nm wavelengths.

Investigating contact toxicity of Geranium and Artemisia essential oils on Bemisia tabaci Gen.

PubMed Central

Yarahmadi, Fatemeh; Rajabpour, Ali; Zandi Sohani, Nooshin; Ramezani, Leila

2013-01-01

Objective: Sweet potato whitefly, Bemisia tabaci Gen. (B. tabaci), is one of the most important pests of various greenhouse crops in Iran. Nowadays, chemical insecticides are broadly used for control of the pests that causes risk to consumer's health. For the first time, contact toxicity of Pelargonium roseum Andrews and Artemisia sieberi Besser essential oils on B. tabaci and its possible application against the whitefly was evaluated in 2012. Materials and Methods: Essential oil with concentrations of 2500, 1250, 125, and 12 ppm were used. Infested leaves of greenhouse cucumber were treated by mentioned concentrations. After 24 hours, mortality of B. tabaci was recorded and compared after correcting by Abbot's formula. Results: Results showed that all concentrations of the essential oil could significantly reduce population of B. tabaci compared with the control treatment. Phytotoxicity of the treated leaves were recorded after 24, 48, and 72 hours and compared with the control. Concentrations of 2500, 1250, and 125 ppm caused severe phytotoxicity on greenhouse cucumber leaves and therefore are not suitable for greenhouse application. Phytotoxicity of 12 ppm was relatively low. Conclusions: This data implicated suitable protective effects of the essential oils to the pest infestation. Therefore, essential oils distillated from Geranium and Artemisia could be applied to control B. tabaci in greenhouse cucumber at V/V 12 ppm. PMID:25050264

Antioxidative response in variegated Pelargonium zonale leaves and generation of extracellular H2O2 in (peri)vascular tissue induced by sunlight and paraquat.

PubMed

Vidović, Marija; Morina, Filis; Prokić, Ljiljana; Milić-Komić, Sonja; Živanović, Bojana; Jovanović, Sonja Veljović

2016-11-01

In this study we exposed variegated leaves of Pelargonium zonale to strong sunlight (>1100μmolm -2 s -1 of photosynthetically active radiation) with and without paraquat (Pq), with the aim to elucidate the mechanisms of H 2 O 2 regulation in green and white tissues with respect to the photosynthetically-dependent generation of reactive oxygen species (ROS). Sunlight induced marked accumulation of H 2 O 2 in the apoplast of vascular and (peri)vascular tissues only in green sectors. This effect was enhanced by the addition of Pq. In the presence of diphenyl iodide, an NADPH oxidase inhibitor, H 2 O 2 accumulation was abolished. Distinct light-induced responses were observed: in photosynthetic cells, sunlight rapidly provoked ascorbate (Asc) biosynthesis and an increase of glutathione reductase (GR) and catalase activities, while in non-photosynthetic cells, early up-regulation of soluble ascorbate peroxidase, dehydroascorbate reductase (DHAR) and GR activities was observed. Paraquat addition stimulated DHAR and GR activities in green sectors, while in white sectors activities of monodehydroascorbate reductase, DHAR and class III peroxidases, as well as Asc content rapidly increased. Differential antioxidative responses in the two tissues in the frame of their contrasting metabolisms, and the possible role of (peri)vascular H 2 O 2 in signaling were discussed. Copyright © 2016 Elsevier GmbH. All rights reserved.

Modified atmosphere treatments as a potential disinfestation technique for arthropod pests in greenhouses.

PubMed

Held, D W; Potter, D A; Gates, R S; Anderson, R G

2001-04-01

Incidental transport of arthropods on plant material can be a significant mode of pest entry into greenhouses. We evaluated the use of controlled atmosphere treatments as a potential way to eliminate arthropod pests on plant propagules (i.e., cuttings or small rooted plants). Lethal exposures to CO2 or N2 were determined for common greenhouse pests including fungus gnat larvae, Bradysia sp.; green peach aphid, Myzus persicae (Sulzer); sweetpotato whitefly, Bemisia sp.; twospotted spider mite, Tetranychus urticae Koch; and western flower thrips, Frankliniella occidentalis (Pergande). We also studied the effect of pest species, life stage, and presence or absence of plants on efficacy of modified atmosphere treatments. Finally, effects of modified atmospheres on plant quality were evaluated for several bedding plant species including begonia, Begonia semperflorens-cultorum Hort. 'Cocktail Series', chrysanthemum, Dendranthema grandiflora Tzvelev., geranium, Pelargonium X hortorum L.H. Bailey, and impatiens, Impatiens wallerana Hook f., and among cultivars of geranium and chrysanthemum. Exposure for 12-18 h to >99% N2 or CO2 caused complete mortality of aphids, mites, thrips, and whiteflies. Fungus gnat larvae were more tolerant of hypoxic conditions. Adult mites and eggs were equally susceptible. For most pests, there was no difference in response to atmospheres modified by CO2 or N2. However, there was variation in response among plant species and cultivars, with effects ranging from delayed flowering to mortality. Despite the possibility of adverse effects on some plants, this work indicates that use of modified atmospheres has potential to eliminate arthropod pests on plant propagules before they are introduced into greenhouses.

Influence of biochar, mycorrhizal inoculation, and fertilizer rate on growth and flowering of Pelargonium (Pelargonium zonale L.) plants.

PubMed

Conversa, Giulia; Bonasia, Anna; Lazzizera, Corrado; Elia, Antonio

2015-01-01

Peat is the most common substrate used in nurseries despite being a very expensive and a non-renewable material. Peat replacement with biochar could be a sound environmental practice, as it is produced from waste biomass, but evaluation of biochar as a potting substrate is needed. Ratios of peat:biochar of 100:0, 70:30, 30:70 (BC0, BC30, and BC70, respectively), two fertilizer rates (FERT1, FERT2), and arbuscular mycorrhizal fungi (AMF) inoculation were tested on potted Pelargonium plants. Plant growth, flowering, bio-physiological and nutritional responses, and root mycorrhization were evaluated. The BC30 mixture did not affect plant growth compared with pure peat. However, BC30 in combination with FERT2 treatment was more effective in enhancing nitrogen (N) and chlorophyll (CHL) leaf concentrations, and leaf and flower numbers. The BC70 mixture depressed plant growth, flowering traits, and root mycorrhization. Leaf N concentration was below the sufficiency range reported for Pelargonium growth. Leaf concentration of phosphorous (P) was adequate in pure peat and in BC30 but it dropped close to sub-optimal values in BC70. The pH value of the mixtures lowered P availability, though in BC30 the mycorrhizal activity could have allowed adequate P plant uptake. In BC70 plants, the deficiency of both N and P might be a reason for the observed growth reduction. The inoculation of the substrate with selected AMF improved plant growth (higher dry biomass, greater floral clusters, larger and more abundant leaves) and quality resulting in unstressed (lower electrolyte leakage and higher relative water content values) and greener leaves (low L(∗) and C(∗), high CHL content) and in more intensely colored flowers. We conclude that biochar can be applied in nursery/potted plant production provided that the proportion in the peat mixture does not exceed 30%. Furthermore, AMF inoculation contributed to achieving the best plant performance in 30% biochar amended medium.

Influence of biochar, mycorrhizal inoculation, and fertilizer rate on growth and flowering of Pelargonium (Pelargonium zonale L.) plants

PubMed Central

Conversa, Giulia; Bonasia, Anna; Lazzizera, Corrado; Elia, Antonio

2015-01-01

Peat is the most common substrate used in nurseries despite being a very expensive and a non-renewable material. Peat replacement with biochar could be a sound environmental practice, as it is produced from waste biomass, but evaluation of biochar as a potting substrate is needed. Ratios of peat:biochar of 100:0, 70:30, 30:70 (BC0, BC30, and BC70, respectively), two fertilizer rates (FERT1, FERT2), and arbuscular mycorrhizal fungi (AMF) inoculation were tested on potted Pelargonium plants. Plant growth, flowering, bio-physiological and nutritional responses, and root mycorrhization were evaluated. The BC30 mixture did not affect plant growth compared with pure peat. However, BC30 in combination with FERT2 treatment was more effective in enhancing nitrogen (N) and chlorophyll (CHL) leaf concentrations, and leaf and flower numbers. The BC70 mixture depressed plant growth, flowering traits, and root mycorrhization. Leaf N concentration was below the sufficiency range reported for Pelargonium growth. Leaf concentration of phosphorous (P) was adequate in pure peat and in BC30 but it dropped close to sub-optimal values in BC70. The pH value of the mixtures lowered P availability, though in BC30 the mycorrhizal activity could have allowed adequate P plant uptake. In BC70 plants, the deficiency of both N and P might be a reason for the observed growth reduction. The inoculation of the substrate with selected AMF improved plant growth (higher dry biomass, greater floral clusters, larger and more abundant leaves) and quality resulting in unstressed (lower electrolyte leakage and higher relative water content values) and greener leaves (low L∗ and C∗, high CHL content) and in more intensely colored flowers. We conclude that biochar can be applied in nursery/potted plant production provided that the proportion in the peat mixture does not exceed 30%. Furthermore, AMF inoculation contributed to achieving the best plant performance in 30% biochar amended medium. PMID:26136757

Effects of a Chinese medical herbs complex on cellular immunity and toxicity-related conditions of breast cancer patients.

PubMed

Zhuang, S R; Chiu, H F; Chen, S L; Tsai, J H; Lee, M Y; Lee, H S; Shen, Y C; Yan, Y Y; Shane, G T; Wang, C-K

2012-03-01

Rose geranium (Pelargonium graveolens, Geraniaceae) has anti-cancer and anti-inflammatory properties, and promotes wound healing. Similarly, Ganoderma tsugae (Ganodermataceae), Codonopsis pilosula (Campanulaceae) and Angelica sinensis (Apiaceae) are traditional Chinese herbs associated with immunomodulatory functions. In the present study, a randomised, double-blind, placebo-controlled study was conducted to examine whether the Chinese medicinal herb complex, RG-CMH, which represents a mixture of rose geranium and extracts of G. tsugae, C. pilosula and A. sinensis, can improve the immune cell count of cancer patients receiving chemotherapy and/or radiotherapy to prevent leucopenia and immune impairment that usually occurs during cancer therapy. A total of fifty-eight breast cancer patients who received chemotherapy or radiotherapy were enrolled. Immune cell levels in patient serum were determined before, and following, 6 weeks of cancer treatment for patients receiving either an RG-CMH or a placebo. Administration of RG-CMH was associated with a significant reduction in levels of leucocytes from 31·5 % for the placebo group to 13·4 % for the RG-CMH group. Similarly, levels of neutrophils significantly decreased from 35·6 % for the placebo group to 11·0 % for the RG-CMH group. RG-CMH intervention was also associated with a decrease in levels of T cells, helper T cells, cytotoxic T cells and natural killer cells compared with the placebo group. However, these differences between the two groups were not statistically significant. In conclusion, administration of RG-CMH to patients receiving chemotherapy/radiotherapy may have the capacity to delay, or ease, the reduction in levels of leucocytes and neutrophils that are experienced by patients during cancer treatment.

The relationship between nectaries and floral architecture: a case study in Geraniaceae and Hypseocharitaceae.

PubMed

Jeiter, Julius; Hilger, Hartmut H; Smets, Erik F; Weigend, Maximilian

2017-11-10

Flowers of Geraniaceae and Hypseocharitaceae are generally considered as morphologically simple. However, previous studies indicated complex diversity in floral architecture including tendencies towards synorganization. Most of the species have nectar-rewarding flowers which makes the nectaries a key component of floral organization and architecture. Here, the development of the floral nectaries is studied and placed into the context of floral architecture. Seven species from Geraniaceae and one from Hypseocharitaceae were investigated using scanning electron microscopy and light microscopy. Samples were prepared and processed using standard protocols. The development of the nectary glands follows the same trajectory in all species studied. Minor differences occur in the onset of nectarostomata development. The most striking finding is the discovery that a short anthophore develops via intercalary growth at the level of the nectary glands. This anthophore lifts up the entire flower apart from the nectary gland itself and thus plays an important role in floral architecture, especially in the flowers of Pelargonium. Here, the zygomorphic flowers show a particularly extensive receptacular growth, resulting in the formation of a spur-like receptacular cavity ('inner spur'). The nectary gland is hidden at the base of the cavity. Various forms of compartmentalization, culminating in the 'revolver flower' of Geranium maderense, are described. Despite the superficial similarity of the flowers in Geraniaceae and Hypseocharitaceae, there is broad diversity in floral organization and floral architecture. While the receptacular origin of the spur-like cavity in Pelargonium had already been described, anthophore formation via intercalary growth of the receptacle in the other genera had not been previously documented. In the context of the most recent phylogenies of the families, an evolutionary series for the floral architecture is proposed, underscoring the importance of synorganization in these seemingly simple flowers. © The Author 2017. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com

Cell wall composition profiling of parasitic giant dodder (Cuscuta reflexa) and its hosts: a priori differences and induced changes.

PubMed

Johnsen, Hanne R; Striberny, Bernd; Olsen, Stian; Vidal-Melgosa, Silvia; Fangel, Jonatan U; Willats, William G T; Rose, Jocelyn K C; Krause, Kirsten

2015-08-01

Host plant penetration is the gateway to survival for holoparasitic Cuscuta and requires host cell wall degradation. Compositional differences of cell walls may explain why some hosts are amenable to such degradation while others can resist infection. Antibody-based techniques for comprehensive profiling of cell wall epitopes and cell wall-modifying enzymes were applied to several susceptible hosts and a resistant host of Cuscuta reflexa and to the parasite itself. Infected tissue of Pelargonium zonale contained high concentrations of de-esterified homogalacturonans in the cell walls, particularly adjacent to the parasite's haustoria. High pectinolytic activity in haustorial extracts and high expression levels of pectate lyase genes suggest that the parasite contributes directly to wall remodeling. Mannan and xylan concentrations were low in P. zonale and in five susceptible tomato introgression lines, but high in the resistant Solanum lycopersicum cv M82, and in C. reflexa itself. Knowledge of the composition of resistant host cell walls and the parasite's own cell walls is useful in developing strategies to prevent infection by parasitic plants. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Identifying Effective Design Approaches to Allocate Genotypes in Two-Phase Designs: A Case Study in Pelargonium zonale.

PubMed

Molenaar, Heike; Boehm, Robert; Piepho, Hans-Peter

2017-01-01

Robust phenotypic data allow adequate statistical analysis and are crucial for any breeding purpose. Such data is obtained from experiments laid out to best control local variation. Additionally, experiments frequently involve two phases, each contributing environmental sources of variation. For example, in a former experiment we conducted to evaluate production related traits in Pelargonium zonale , there were two consecutive phases, each performed in a different greenhouse. Phase one involved the propagation of the breeding strains to obtain the stem cutting count, and phase two involved the assessment of root formation. The evaluation of the former study raised questions regarding options for improving the experimental layout: (i) Is there a disadvantage to using exactly the same design in both phases? (ii) Instead of generating a separate layout for each phase, can the design be optimized across both phases, such that the mean variance of a pair-wise treatment difference (MVD) can be decreased? To answer these questions, alternative approaches were explored to generate two-phase designs either in phase-wise order (Option 1) or across phases (Option 2). In Option 1 we considered the scenarios (i) using in both phases the same experimental design and (ii) randomizing each phase separately. In Option 2, we considered the scenarios (iii) generating a single design with eight replicates and splitting these among the two phases, (iv) separating the block structure across phases by dummy coding, and (v) design generation with optimal alignment of block units in the two phases. In both options, we considered the same or different block structures in each phase. The designs were evaluated by the MVD obtained by the intra-block analysis and the joint inter-block-intra-block analysis. The smallest MVD was most frequently obtained for designs generated across phases rather than for each phase separately, in particular when both phases of the design were separated with a single pseudo-level. The joint optimization ensured that treatment concurrences were equally balanced across pairs, one of the prerequisites for an efficient design. The proposed alternative approaches can be implemented with any model-based design packages with facilities to formulate linear models for treatment and block structures.

[Effect of extracts of Geranium ayavacense W. (Pasuchaca) on glycemia on rats with experimental diabetes mellitus].

PubMed

Aranda-Ventura, José; Villacrés, Jorge; Mego, Rosario; Delgado, Henry

2014-04-01

To determine if the lyophilized aqueous extract of Geranium ayavacense (Pasuchaca) has any effect on glycemia in rats with experimental diabetes mellitus. Experimental diabetes was induced with alloxan. Rats included in the study met the following criteria: glycemia greater than 200 mg/dL post administration of alloxan, and with a weight greater than 200 g. Rats with experimental diabetes were divided into six groups of eight rats each. Group I received 3 mL of distilled water (control); group II received Geranium ayavacense 12.7 mg/kg; group III received Geranium ayavacense 100 mg/kg; group IV received Geranium ayavacense 200 mg/kg; group V received Geranium ayavacense 300 mg/kg; group VI received Geranium ayavacense 500 mg/kg. Basal glycemia was determined. Glycemia evaluations were performed at the 1st, 3rd, 6th, 12th and 24th hour after administrating the different interventions. Geranium ayavacense groups of 300 and 500 mg/kg decreased glycemia significantly (p <0.01) in every hour assessed after administration of the extract, when compared with the control group. Geranium ayavacense group of 300 mg/kg decreased their blood glucose 8.14; 10.68; 14.87; 19.36 and 23.7% in the 1st, 3rd, 6th, 12th and 24th hour respectively. Under experimental conditions, the aqueous extract of Geranium ayavacense has hypoglycemic effects in rats.

Effects of gaseous ammonia on intracellular pH values in leaves of C 3- and C 4-plants

NASA Astrophysics Data System (ADS)

Yin, Zu-Hua; Kaiser, Werner; Heber, Ulrich; Raven, John A.

Responses of cytosolic and vacuolar pH to different concentrations (1.3-5.4 μmol NH 3 mol -1 gas or 0.940-3.825 mg NH 3 m -3 gas) of gaseous NH 3 were studied in experiments of 3 h duration by recording changes in fluorescence of pyranine and esculin in leaves of C 3 and C 4 plants. After a lag phase of 0.5-4 min, the uptake of NH 3 at 50-200 nmol m -2 leaf area s -1 increased pyranine fluorescence, indicating cytosolic alkalinization in leaves of Pelargonium zonale L. (C 3) and Amaranthus caudatus L. (C 4). A smaller increase in esculin fluorescence induced by NH 3 indicated some vacuolar alkalization in a Spinacia oleracea L. leaf. Photosynthesis and transpiration remained unchanged during exposure of illuminated leaves to NH 3 for up to 30 min (the maximum tested). CO 2 concentrations influenced the extent of cytosolic alkalinization. 500 μmol CO 2 mol -1 gas suppressed the NH 3-induced cytosolic alkalinization relative to that found in 16 μmol CO 2 mol -1 gas. The suppressing effect of CO 2 on NH 3-induced alkalization was larger in illuminated leaves of the C 4Amaranthus than the C 3Pelargonium. These results indicate that the alkaline pH shift caused by solution and protonation of NH 3 in aqueous leaf compartments is affected by assimilation of NH 3.

Activity of xyloglucan endotransglucosylases/hydrolases suggests a role during host invasion by the parasitic plant Cuscuta reflexa

PubMed Central

2017-01-01

The parasitic vines of the genus Cuscuta form haustoria that grow into other plants and connect with their vascular system, thus allowing the parasite to feed on its host. A major obstacle that meets the infection organ as it penetrates the host tissue is the rigid plant cell wall. In the present study, we examined the activity of xyloglucan endotransglucosylases/hydrolases (XTHs) during the host-invasive growth of the haustorium. The level of xyloglucan endotransglucosylation (XET) activity was found to peak at the penetrating stage of Cuscuta reflexa on its host Pelargonium zonale. In vivo colocalization of XET activity and donor substrate demonstrated XET activity at the border between host and parasite. A test for secretion of XET-active enzymes from haustoria of C. reflexa corroborated this and further indicated that the xyloglucan-modifying enzymes originated from the parasite. A known inhibitor of XET, Coomassie Brilliant Blue R250, was shown to reduce the level of XET in penetrating haustoria of C. reflexa. Moreover, the coating of P. zonale petioles with the inhibitor compound lowered the number of successful haustorial invasions of this otherwise compatible host plant. The presented data indicate that the activity of Cuscuta XTHs at the host-parasite interface is essential to penetration of host plant tissue. PMID:28448560

Activity of xyloglucan endotransglucosylases/hydrolases suggests a role during host invasion by the parasitic plant Cuscuta reflexa.

PubMed

Olsen, Stian; Krause, Kirsten

2017-01-01

The parasitic vines of the genus Cuscuta form haustoria that grow into other plants and connect with their vascular system, thus allowing the parasite to feed on its host. A major obstacle that meets the infection organ as it penetrates the host tissue is the rigid plant cell wall. In the present study, we examined the activity of xyloglucan endotransglucosylases/hydrolases (XTHs) during the host-invasive growth of the haustorium. The level of xyloglucan endotransglucosylation (XET) activity was found to peak at the penetrating stage of Cuscuta reflexa on its host Pelargonium zonale. In vivo colocalization of XET activity and donor substrate demonstrated XET activity at the border between host and parasite. A test for secretion of XET-active enzymes from haustoria of C. reflexa corroborated this and further indicated that the xyloglucan-modifying enzymes originated from the parasite. A known inhibitor of XET, Coomassie Brilliant Blue R250, was shown to reduce the level of XET in penetrating haustoria of C. reflexa. Moreover, the coating of P. zonale petioles with the inhibitor compound lowered the number of successful haustorial invasions of this otherwise compatible host plant. The presented data indicate that the activity of Cuscuta XTHs at the host-parasite interface is essential to penetration of host plant tissue.

Identifying Effective Design Approaches to Allocate Genotypes in Two-Phase Designs: A Case Study in Pelargonium zonale

PubMed Central

Molenaar, Heike; Boehm, Robert; Piepho, Hans-Peter

2018-01-01

Robust phenotypic data allow adequate statistical analysis and are crucial for any breeding purpose. Such data is obtained from experiments laid out to best control local variation. Additionally, experiments frequently involve two phases, each contributing environmental sources of variation. For example, in a former experiment we conducted to evaluate production related traits in Pelargonium zonale, there were two consecutive phases, each performed in a different greenhouse. Phase one involved the propagation of the breeding strains to obtain the stem cutting count, and phase two involved the assessment of root formation. The evaluation of the former study raised questions regarding options for improving the experimental layout: (i) Is there a disadvantage to using exactly the same design in both phases? (ii) Instead of generating a separate layout for each phase, can the design be optimized across both phases, such that the mean variance of a pair-wise treatment difference (MVD) can be decreased? To answer these questions, alternative approaches were explored to generate two-phase designs either in phase-wise order (Option 1) or across phases (Option 2). In Option 1 we considered the scenarios (i) using in both phases the same experimental design and (ii) randomizing each phase separately. In Option 2, we considered the scenarios (iii) generating a single design with eight replicates and splitting these among the two phases, (iv) separating the block structure across phases by dummy coding, and (v) design generation with optimal alignment of block units in the two phases. In both options, we considered the same or different block structures in each phase. The designs were evaluated by the MVD obtained by the intra-block analysis and the joint inter-block–intra-block analysis. The smallest MVD was most frequently obtained for designs generated across phases rather than for each phase separately, in particular when both phases of the design were separated with a single pseudo-level. The joint optimization ensured that treatment concurrences were equally balanced across pairs, one of the prerequisites for an efficient design. The proposed alternative approaches can be implemented with any model-based design packages with facilities to formulate linear models for treatment and block structures. PMID:29354145

Medicinal properties and conservation of Pelargonium sidoides DC.

PubMed

Moyo, Mack; Van Staden, Johannes

2014-03-14

Pelargonium sidoides DC. (Geraniaceae), a popular medicinal plant used in traditional medicine in the treatment of gastrointestinal ailments has been transformed into a phytopharmaceutical (EPs(®) 7360) for treating respiratory tract infections. The increasing international demand for Pelargonium sidoides has led to localised overexploitation of its wild populations in southern Africa. The aim of the review is to provide a synthesis of the current state of scientific knowledge on the phytochemical, pharmacological and toxicological properties of Pelargonium sidoides as well as the potential role of plant biotechnology in its conservation. The review highlights knowledge gaps in these research areas. A comprehensive literature search involving mainly electronic and library sources of information were used to collate and synthesise published data. Experimental results from in vitro studies indicate that bioactive phytochemical constituents of Pelargonium sidoides may not possess a direct antimicrobial effect, but instead act by interfering with microbial binding to host cell receptors, inhibition of key enzymes and the production of antimicrobial effector molecules such as nitric oxide and interferons (IFNs) by the host cells. Furthermore, clinical evaluations in randomised, double-blind, placebo-controlled trials have demonstrated the beneficial effect of Pelargonium sidoides in the treatment of respiratory tract infections with few side effects. However, there is lack of adequate information on the safety evaluation of the plant. On the other hand, the increasing demand for Pelargonium sidoides has led to localised illegal harvesting of wild plants. Pharmacological data reported in literature suggest that Pelargonium sidoides shows a beneficial effect in the treatment of respiratory tract infections. However, more studies are required to elucidate the mode of action of the active constituents exhibited in the treatment of respiratory tract infections and other health conditions caused by microbial attack. Furthermore, the pharmacological usefulness of Pelargonium sidoides must take cognisance of the broader context involving the need for conservation-friendly approaches in its utilisation. In this regard, plant biotechnology applications can play a meaningful role in a holistic conservation strategy. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Limited elimination of two viruses by cryotherapy of pelargonium apices related to virus distribution.

PubMed

Gallard, A; Mallet, R; Chevalier, M; Grapin, A

2011-01-01

The possibility of eradicating the pelargonium flower break virus (PFBV) and pelargonium line pattern virus (PLPV) by cryotherapy of axillary shoot apices was investigated using five Pelargonium cultivars. Viruses were detected by DAS-ELISA and their location was determined by immunolocalization. Apex culture did not permit elimination of PFBV and only 15 percent regenerated plants of 'Stellar Artic' cultivar were ELISA PLPV-negative. Plants regenerated from cryotherapy-treated apices were tested by DAS-ELISA after a 3-month in vitro culture period. Viruses were not detected in 25 percent and 50 percent of the plants tested for PFBV and PLPV, respectively. However, immunolocalization carried out on apices originating from cryopreserved shoot tips sampled from DAS-ELISA negative plants showed that they were still virus-infected. Using immunolocalization, PFBV and PLPV could be detected in Pelargonium apices, even in the meristematic dome. However, viral particles were more numerous in basal zone cells than in meristematic cells. Our results demonstrate that PFBV and PLPV are present within meristematic cells and that cryopreservation can partly reduce the quantity of these viruses in Pelargonium plants but not eliminate them totally. Additional knowledge on localization and behaviour of viruses during cryopreservation is essential to optimize cryotherapy and plant genetic resource management.

Ozone injury increases infection of geranium leaves by Botrytis cinerea

DOE Office of Scientific and Technical Information (OSTI.GOV)

Manning, W.J.; Feder, W.A.; Perkins, I.

1970-04-01

Detached and attached, inoculated and noninoculated, ozone-injured and noninjured leaves from the lower, middle, and terminal regions of plants of geranium cultivars Enchantress and White Mountain were observed for infection by Botrytis cinerea. Previous exposure to ozone did not appreciably influence the susceptibility of leaves of either geranium cultivar to infection by B. cinerea, unless there was visible ozone injury. Ozone-injured, necrotic tissues on older attached and detached geranium leaves of both cultivars served as infection courts for B. cinerea. 14 references, 1 table.

Species-level phylogeny, fruit evolution and diversification history of Geranium (Geraniaceae).

PubMed

Marcussen, Thomas; Meseguer, Andrea S

2017-05-01

The cosmopolitan genus Geranium L. (Geraniaceae) consists of c. 350 species distributed in temperate habitats worldwide, with most of its diversity concentrated in the Mediterranean region. Unlike other genera in Geraniaceae, the species of Geranium present contrasting seed discharge syndromes, i.e. the 'Erodium-type' (ET), the 'carpel-projection type' (CP), the 'seed-ejection type' (SE), and the 'inoperative type' (IT), which have been used to delimit major groups within the genus. However, phylogenetic relationships within Geranium are unknown and so is the evolution of the different seed discharge mechanisms. Here, we used a calibrated multispecies coalescent approach to infer the species-level phylogeny and divergence times of the genus based on chloroplast (rbcL, trnL-trnF) and nuclear (ITS) DNA sequences. Our sampling represents most of the morphological variation described in the genus. We reconstruct the evolution of the seed discharge mechanism using ancestral state reconstruction (ASR) techniques on the multispecies coalescent tree, and assess the association between fruit type evolution and species diversification using stochastic birth-death and trait-dependent diversification models. Finally, we reconstruct the early biogeographic history of the genus using discrete and continuous biogeographic analyses of species distribution centroids, including fossil evidence and tip dates. Our results show that fruit type is homoplasious and that the classification based on fruit type in Geranium is artificial. The taxonomy and putative apomorphic characters for Geranium are discussed. ASR of the fruit characters suggests that ET may represent the ancestral state in Geranium and from which CP originated twice, IT presumably once, and SE twice. The independent appearance of the SE syndrome is in both cases associated with increases in diversification rates in the genus. The biogeographic analysis centers the origin and early 10Ma diversification of Geranium on the Mediterranean region. The evolution of seed discharge mechanism about 5Ma might have allowed the species of Geranium to increase in geographic range and to ultimately, diversify. Copyright © 2017 Elsevier Inc. All rights reserved.

Expansion of inverted repeat does not decrease substitution rates in Pelargonium plastid genomes.

PubMed

Weng, Mao-Lun; Ruhlman, Tracey A; Jansen, Robert K

2017-04-01

For species with minor inverted repeat (IR) boundary changes in the plastid genome (plastome), nucleotide substitution rates were previously shown to be lower in the IR than the single copy regions (SC). However, the impact of large-scale IR expansion/contraction on plastid nucleotide substitution rates among closely related species remains unclear. We included plastomes from 22 Pelargonium species, including eight newly sequenced genomes, and used both pairwise and model-based comparisons to investigate the impact of the IR on sequence evolution in plastids. Ten types of plastome organization with different inversions or IR boundary changes were identified in Pelargonium. Inclusion in the IR was not sufficient to explain the variation of nucleotide substitution rates. Instead, the rate heterogeneity in Pelargonium plastomes was a mixture of locus-specific, lineage-specific and IR-dependent effects. Our study of Pelargonium plastomes that vary in IR length and gene content demonstrates that the evolutionary consequences of retaining these repeats are more complicated than previously suggested. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

Contrasting Patterns of Nucleotide Substitution Rates Provide Insight into Dynamic Evolution of Plastid and Mitochondrial Genomes of Geranium.

PubMed

Park, Seongjun; Ruhlman, Tracey A; Weng, Mao-Lun; Hajrah, Nahid H; Sabir, Jamal S M; Jansen, Robert K

2017-06-01

Geraniaceae have emerged as a model system for investigating the causes and consequences of variation in plastid and mitochondrial genomes. Incredible structural variation in plastid genomes (plastomes) and highly accelerated evolutionary rates have been reported in selected lineages and functional groups of genes in both plastomes and mitochondrial genomes (mitogenomes), and these phenomena have been implicated in cytonuclear incompatibility. Previous organelle genome studies have included limited sampling of Geranium, the largest genus in the family with over 400 species. This study reports on rates and patterns of nucleotide substitutions in plastomes and mitogenomes of 17 species of Geranium and representatives of other Geraniaceae. As detected across other angiosperms, substitution rates in the plastome are 3.5 times higher than the mitogenome in most Geranium. However, in the branch leading to Geranium brycei/Geranium incanum mitochondrial genes experienced significantly higher dN and dS than plastid genes, a pattern that has only been detected in one other angiosperm. Furthermore, rate accelerations differ in the two organelle genomes with plastomes having increased dN and mitogenomes with increased dS. In the Geranium phaeum/Geranium reflexum clade, duplicate copies of clpP and rpoA genes that experienced asymmetric rate divergence were detected in the single copy region of the plastome. In the case of rpoA, the branch leading to G. phaeum/G. reflexum experienced positive selection or relaxation of purifying selection. Finally, the evolution of acetyl-CoA carboxylase is unusual in Geraniaceae because it is only the second angiosperm family where both prokaryotic and eukaryotic ACCases functionally coexist in the plastid. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Contrasting Patterns of Nucleotide Substitution Rates Provide Insight into Dynamic Evolution of Plastid and Mitochondrial Genomes of Geranium

PubMed Central

Park, Seongjun; Ruhlman, Tracey A.; Weng, Mao-Lun; Hajrah, Nahid H.; Sabir, Jamal S.M.

2017-01-01

Abstract Geraniaceae have emerged as a model system for investigating the causes and consequences of variation in plastid and mitochondrial genomes. Incredible structural variation in plastid genomes (plastomes) and highly accelerated evolutionary rates have been reported in selected lineages and functional groups of genes in both plastomes and mitochondrial genomes (mitogenomes), and these phenomena have been implicated in cytonuclear incompatibility. Previous organelle genome studies have included limited sampling of Geranium, the largest genus in the family with over 400 species. This study reports on rates and patterns of nucleotide substitutions in plastomes and mitogenomes of 17 species of Geranium and representatives of other Geraniaceae. As detected across other angiosperms, substitution rates in the plastome are 3.5 times higher than the mitogenome in most Geranium. However, in the branch leading to Geranium brycei/Geranium incanum mitochondrial genes experienced significantly higher dN and dS than plastid genes, a pattern that has only been detected in one other angiosperm. Furthermore, rate accelerations differ in the two organelle genomes with plastomes having increased dN and mitogenomes with increased dS. In the Geranium phaeum/Geranium reflexum clade, duplicate copies of clpP and rpoA genes that experienced asymmetric rate divergence were detected in the single copy region of the plastome. In the case of rpoA, the branch leading to G. phaeum/G. reflexum experienced positive selection or relaxation of purifying selection. Finally, the evolution of acetyl-CoA carboxylase is unusual in Geraniaceae because it is only the second angiosperm family where both prokaryotic and eukaryotic ACCases functionally coexist in the plastid. PMID:28854633

Chemical composition analysis and in vitro biological activities of ten essential oils in human skin cells.

PubMed

Han, Xuesheng; Beaumont, Cody; Stevens, Nicole

2017-12-01

Research on the biological effects of essential oils on human skin cells is scarce. In the current study, we primarily explored the biological activities of 10 essential oils (nine single and one blend) in a pre-inflamed human dermal fibroblast system that simulated chronic inflammation. We measured levels of proteins critical for inflammation, immune responses, and tissue-remodeling processes. The nine single oils were distilled from Citrus bergamia (bergamot), Coriandrum sativum (cilantro), Pelargonium graveolens (geranium), Helichrysum italicum (helichrysum), Pogostemon cablin (patchouli), Citrus aurantium (petitgrain), Santalum album (sandalwood), Nardostachys jatamansi (spikenard), and Cananga odorata (ylang ylang). The essential oil blend (commercial name Immortelle) is composed of oils from frankincense, Hawaiian sandalwood, lavender, myrrh, helichrysum, and rose. All the studied oils were significantly anti-proliferative against these cells. Furthermore, bergamot, cilantro, and spikenard essential oils primarily inhibited protein molecules related to inflammation, immune responses, and tissue-remodeling processes, suggesting they have anti-inflammatory and wound healing properties. Helichrysum and ylang ylang essential oils, as well as Immortelle primarily inhibited tissue remodeling-related proteins, suggesting a wound healing property. The data are consistent with the results of existing studies examining these oils in other models and suggest that the studied oils may be promising therapeutic candidates. Further research into their biological mechanisms of action is recommended. The differential effects of these essential oils suggest that they exert activities by different mechanisms or pathways, warranting further investigation. The chemical composition of these oils was analyzed using gas chromatography-mass spectrometry.

Updates on chemical and biological research on botanical ingredients in dietary supplements.

PubMed

Pawar, Rahul S; Tamta, Hemlata; Ma, Jun; Krynitsky, Alexander J; Grundel, Erich; Wamer, Wayne G; Rader, Jeanne I

2013-05-01

Increased use of dietary supplements is a phenomenon observed worldwide. In the USA, more than 40% of the population recently reported using complementary and alternative medicines, including botanical dietary supplements. Perceptions that such dietary supplements are natural and safe, may prevent disease, may replace prescription medicines, or may make up for a poor diet, play important roles in their increased use. Toxicity of botanical dietary supplements may result from the presence of naturally occurring toxic constituents or from contamination or adulteration with pharmaceutical agents, heavy metals, mycotoxins, pesticides, or bacteria, misidentification of a plant species in a product, formation of electrophilic metabolites, organ-specific reactions, or botanical-drug interactions. The topics discussed in this review illustrate several issues in recent research on botanical ingredients in dietary supplements. These include (1) whether 1,3-dimethylamylamine is a natural constituent of rose geranium (Pelargonium graveolens), (2) how analysis of the components of dietary supplements containing bitter melon (Momordica charantia) is essential to understanding their potential biological effects, and (3) how evolving methods for in vitro studies on botanical ingredients can contribute to safety evaluations. The virtual explosion in the use of botanical ingredients in hundreds of products presents a considerable challenge to the analytical community, and the need for appropriate methods cannot be overstated. We review recent developments and use of newer and increasingly sensitive methods that can contribute to increasing the safety and quality of botanical ingredients in dietary supplements.

Laboratory evaluation of aromatic essential oils from thirteen plant species as candidate repellents against Leptotrombidium chiggers (Acari: Trombiculidae), the vector of scrub typhus.

PubMed

Eamsobhana, Praphathip; Yoolek, Adisak; Kongkaew, Wittaya; Lerdthusnee, Kriangkrai; Khlaimanee, Nittaya; Parsartvit, Anchana; Malainual, Nat; Yong, Hoi-Sen

2009-03-01

Scrub typhus, a rickettsial disease transmitted by several species of Leptotrombidium chiggers (larvae), is endemic in many areas of Asia. The disease is best prevented by the use of personal protective measures, including repellents. In this study commercially produced aromatic, essential oils of 13 plant species and ethanol (control) were tested in the laboratory for repellency against host-seeking chiggers of Leptotrombidium imphalum Vercammen-Grandjean and Langston (Acari: Trombiculidae). A rapid, simple and economic in vitro test method was used by exposing the chigger for up to 5 min. Repellency was based on relative percentages of chiggers attracted to test and control substances. Four of the 13 essential oils showed promise as effective repellent against L. imphalum chiggers. Syzygium aromaticum (clove) oil exhibited 100% repellency at 5% concentration (dilution with absolute ethanol), whereas Melaleuca alternifolia (tea tree) oil exhibited 100% repellency at 40% concentration. Undiluted oils of Zingiber cassamunar (plai) and Eucalyptus globules (blue gum) exhibited 100% repellency. Of the remaining nine essential oils, only 100% Pelargonium graveolens (geranium) exhibited >50% repellency (viz. 57%). Styrax torkinensis (benzoin) oil did not exhibit any repellency. These findings show that several aromatic, essential oils of plants may be useful as chigger repellent for the prevention of scrub typhus. Syzygium aromaticum oil may be safer and more economical to prevent chigger attacks than commercially available synthetic chemicals, such as DEET that may have harmful side effects.

Dynamic evolution of Geranium mitochondrial genomes through multiple horizontal and intracellular gene transfers.

PubMed

Park, Seongjun; Grewe, Felix; Zhu, Andan; Ruhlman, Tracey A; Sabir, Jamal; Mower, Jeffrey P; Jansen, Robert K

2015-10-01

The exchange of genetic material between cellular organelles through intracellular gene transfer (IGT) or between species by horizontal gene transfer (HGT) has played an important role in plant mitochondrial genome evolution. The mitochondrial genomes of Geraniaceae display a number of unusual phenomena including highly accelerated rates of synonymous substitutions, extensive gene loss and reduction in RNA editing. Mitochondrial DNA sequences assembled for 17 species of Geranium revealed substantial reduction in gene and intron content relative to the ancestor of the Geranium lineage. Comparative analyses of nuclear transcriptome data suggest that a number of these sequences have been functionally relocated to the nucleus via IGT. Evidence for rampant HGT was detected in several Geranium species containing foreign organellar DNA from diverse eudicots, including many transfers from parasitic plants. One lineage has experienced multiple, independent HGT episodes, many of which occurred within the past 5.5 Myr. Both duplicative and recapture HGT were documented in Geranium lineages. The mitochondrial genome of Geranium brycei contains at least four independent HGT tracts that are absent in its nearest relative. Furthermore, G. brycei mitochondria carry two copies of the cox1 gene that differ in intron content, providing insight into contrasting hypotheses on cox1 intron evolution. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Phylogeny, rate variation, and genome size evolution of Pelargonium (Geraniaceae).

PubMed

Weng, Mao-Lun; Ruhlman, Tracey A; Gibby, Mary; Jansen, Robert K

2012-09-01

The phylogeny of 58 Pelargonium species was estimated using five plastid markers (rbcL, matK, ndhF, rpoC1, trnL-F) and one mitochondrial gene (nad5). The results confirmed the monophyly of three major clades and four subclades within Pelargonium but also indicate the need to revise some sectional classifications. This phylogeny was used to examine karyotype evolution in the genus: plotting chromosome sizes, numbers and 2C-values indicates that genome size is significantly correlated with chromosome size but not number. Accelerated rates of nucleotide substitution have been previously detected in both plastid and mitochondrial genes in Pelargonium, but sparse taxon sampling did not enable identification of the phylogenetic distribution of these elevated rates. Using the multigene phylogeny as a constraint, we investigated lineage- and locus-specific heterogeneity of substitution rates in Pelargonium for an expanded number of taxa and demonstrated that both plastid and mitochondrial genes have had accelerated substitution rates but with markedly disparate patterns. In the plastid, the exons of rpoC1 have significantly accelerated substitution rates compared to its intron and the acceleration was mainly due to nonsynonymous substitutions. In contrast, the mitochondrial gene, nad5, experienced substantial acceleration of synonymous substitution rates in three internal branches of Pelargonium, but this acceleration ceased in all terminal branches. Several lineages also have dN/dS ratios significantly greater than one for rpoC1, indicating that positive selection is acting on this gene, whereas the accelerated synonymous substitutions in the mitochondrial gene are the result of elevated mutation rates. Published by Elsevier Inc.

Genus-Wide Screening Reveals Four Distinct Types of Structural Plastid Genome Organization in Pelargonium (Geraniaceae)

PubMed Central

Röschenbleck, Joachim; Weinl, Stefan; Kudla, Jörg; Müller, Kai F.

2017-01-01

Geraniaceae are known for their unusual plastid genomes (plastomes), with the genus Pelargonium being most conspicuous with regard to plastome size and gene organization as judged by the sequenced plastomes of P. x hortorum and P. alternans. However, the hybrid origin of P. x hortorum and the uncertain phylogenetic position of P. alternans obscure the events that led to these extraordinary plastomes. Here, we examine all plastid reconfiguration hotspots for 60 Pelargonium species across all subgenera using a PCR and sequencing approach. Our reconstruction of the rearrangement history revealed four distinct plastome types. The ancestral plastome configuration in the two subgenera Magnipetala and Pelargonium is consistent with that of the P. alternans plastome, whereas that of the subgenus Parvulipetala deviates from this organization by one synapomorphic inversion in the trnNGUU–ndhF region. The plastome of P. x hortorum resembles those of one group of the subgenus Paucisignata, but differs from a second group by another inversion in the psaI–psaJ region. The number of microstructural changes and amount of repetitive DNA are generally elevated in all inverted regions. Nucleotide substitution rates correlate positively with the number of indels in all regions across the different subgenera. We also observed lineage- and species-specific changes in the gene content, including gene duplications and fragmentations. For example, the plastid rbcL–psaI region of Pelargonium contains a highly variable accD-like region. Our results suggest alternative evolutionary paths under possibly changing modes of plastid transmission and indicate the non-functionalization of the plastid accD gene in Pelargonium. PMID:28172771

Frankincense, pine needle and geranium essential oils suppress tumor progression through the regulation of the AMPK/mTOR pathway in breast cancer.

PubMed

Ren, Peng; Ren, Xiang; Cheng, Lei; Xu, Lixin

2018-01-01

BC (BC), as the most common malignancy in women worldwide, is associated with high morbidity and mortality. However, chemoresistance and toxicity are the main causes that limit the success of treatment in aggressive BC cases. Thus, there is a vital need to identify and develop novel therapeutic agents. Frankincense, pine needle and geranium essential oils have been reported to play critical biological activities in cancer. However, to the best of our knowledge whether frankincense, pine needle and geranium essential oils have any effect on the progression of BC in MCF-7 cells remains unclear. In the present study, we assessed the possible effects of frankincense, pine needle and geranium essential oils on cell viability, proliferation, migration and invasion as well as the possible mechanisms. MCF-7 cells were treated with oils, and associations with BC were investigated. In the present study, we clearly revealed that frankincense, pine needle and geranium essential oils suppressed cell viability, proliferation, migration and invasion in human BC MCF-7 cells. Further data demonstrated that frankincense, pine needle and geranium essential oils induced apoptosis, but did not affect cell cycle progression. Consistent with the in vitro activities, frankincense essential oil was effective in inhibiting tumor growth and inducing tumor cell apoptosis in a human BC mouse model. In addition, these 3 essential oils modulated the activity of the AMPK/mTOR signaling pathway. In conclusion, the present study indicated that frankincense, pine needle and geranium essential oils were involved in the progression of BC cells possibly through the AMPK/mTOR pathway.

The Sensitivity of Endodontic Enterococcus spp. Strains to Geranium Essential Oil.

PubMed

Łysakowska, Monika E; Sienkiewicz, Monika; Banaszek, Katarzyna; Sokołowski, Jerzy

2015-12-21

Enterococci are able to survive endodontic procedures and contribute to the failure of endodontic therapy. Thus, it is essential to identify novel ways of eradicating them from infected root canals. One such approach may be the use of antimicrobials such as plant essential oils. Enterococcal strains were isolated from endodontically treated teeth by standard microbiological methods. Susceptibility to antibiotics was evaluated by the disc-diffusion method. The minimal inhibitory concentration (MIC) of geranium essential oil was investigated by microdilution in 96-well microplates in Mueller Hinton Broth II. Biofilm eradication concentrations were checked in dentin tests. Geranium essential oil inhibited enterococcal strains at concentrations ranging from 1.8-4.5 mg/mL. No correlation was shown between resistance to antibiotics and the MICs of the test antimicrobials. The MICs of the test oil were lower than those found to show cytotoxic effects on the HMEC-1 cell line. Geranium essential oil eradicated enterococcal biofilm at concentrations of 150 mg/mL. Geranium essential oil inhibits the growth of endodontic enterococcal species at lower concentrations than those required to reach IC50 against the HMEC-1 cell line, and is effective against bacteria protected in biofilm at higher concentrations. In addition, bacteria do not develop resistance to essential oils. Hence, geranium essential oil represents a possible alternative to other antimicrobials during endodontic procedures.

Effect of Variable Solvents on Particle Size of Geranium Oil-Loaded Solid Lipid Nanoparticle (Ge-SLN) For Mosquito Repellent Applications

NASA Astrophysics Data System (ADS)

Asnawi, Syalwati; Aziz, Azila A.; Aziz, Ramlan A.

2009-06-01

A new delivery system for insect repellent is proposed by the incorporation of geranium oil into solid lipid nanoparticle (SLN). A variety of solvents which act as co-surfactants, were introduced to increase the particle size of GE-SLN. Ethanol, which has a high boiling point and a long chain alcohol produced larger particle than dichloromethane. The structure of SLN was not stable when methanol and acetone were used as co-solvents. Concentration of solvents can also influence the size of SLN. In vitro release experiments showed that SLN was able to reduce the rapid evaporation of geranium oil.

PHYSIOLOGY OF ECOTYPIC PLANT RESPONSE TO SULFUR DIOXIDE IN 'GERANIUM CAROLINIANUM' L

EPA Science Inventory

Populations of Geranium carolinianum, winter annual plant common in disturbed habitats vary in their folair response to sulfur dioxide and pollution resistance is characteristic of populations sampled from areas in which SO2 has been a prominent stress. The physiological basis of...

Comparing chemical and biological control strategies for twospotted spider mites (Acari: Tetranychidae) in commercial greenhouse production of bedding plants.

PubMed

Opit, George P; Perret, Jamis; Holt, Kiffnie; Nechols, James R; Margolies, David C; Williams, Kimberly A

2009-02-01

Efficacy, costs, and impact on crop salability of various biological and chemical control strategies for Tetranychus urticae Koch (Acari: Tetranychidae) were evaluated on mixed plantings of impatiens, Impatiens wallerana Hook.f (Ericales: Balsaminaceae), and ivy geranium, Pelargonium peltatum (1.) L'Hér. Ex Aiton (Geraniales: Geraniaceae), cultivars in commercial greenhouses. Chemical control consisting of the miticide bifenazate (Floramite) was compared with two biological control strategies using the predatory mite Phytoseiulus persimilis Athias-Henriot (Acari: Phytoseiidae). Treatments were 1) a single, early application of bifenazate; 2) a single, early release of predatory mites at a 1:4 predator:pest ratio based on leaf samples to estimate pest density; 3) a weekly release of predatory mites at numbers based on the area covered by the crop; and 4) an untreated control. T. urticae populations were monitored for 3 wk after the earliest treatment. When plants were ready for market, their salability was estimated. Bifenazate and density-based P. persimilis treatments effectively reduced T. urticae numbers starting 1 wk after plants had been treated, whereas the scheduled, area-based P. persimilis treatment had little or no effect. The percentage of flats that could be sold at the highest market wholesale price ranged from 15 to 33%, 44 to 86%, 84 to 95%, and 92 to 100%, in the control, weekly area-based P. persimilis, bifenazate, and single density-based P. persimilis treatments, respectively. We have shown that in commercial greenhouse production of herbaceous ornamental bedding plants, estimating pest density to determine the appropriate number of predators to release is as effective and offers nearly the same economic benefit as prophylactic use of pesticides.

Protective activity of geranium oil and its component, geraniol, in combination with vaginal washing against vaginal candidiasis in mice.

PubMed

Maruyama, Naho; Takizawa, Toshio; Ishibashi, Hiroko; Hisajima, Tatsuya; Inouye, Shigeharu; Yamaguchi, Hideyo; Abe, Shigeru

2008-08-01

In order to evaluate an effective administration method of essential oils for vaginal candidiasis, efficacy of vaginal application of essential oils against murine experimental candidiasis was investigated. The effect on vaginal inflammation and Candida growth form was also studied. Vaginal candidiasis was established by intravaginal infection of C. albicans to estradiol-treated mice. These mice intravaginally received essential oils such as geranium and tea tree singly or in combination with vaginal washing. Vaginal administration of clotrimazole significantly decreased the number of viable C. albicans cells in the vaginal cavity by itself. In contrast, these essential oils did not lower the cell number. When application of geranium oil or geraniol was combined with vaginal washing, the cell number was decreased significantly. The myeloperoxidase activity assay exhibited the possibility that essential oils worked not only to reduce the viable cell number of C. albicans, but also to improve vaginal inflammation. The smear of vaginal washing suspension suggested that more yeast-form cells appeared in vaginal smears of these oil-treated mice than in control mice. In vitro study showed that a very low concentration (25 microg/ml) of geranium oil and geraniol inhibited mycelial growth, but not yeast growth. Based on these findings, it is estimated that vaginal application of geranium oil or its main component, geraniol, suppressed Candida cell growth in the vagina and its local inflammation when combined with vaginal washing.

Effect of Inhalation of Aroma of Geranium Essence on Anxiety and Physiological Parameters during First Stage of Labor in Nulliparous Women: a Randomized Clinical Trial

PubMed Central

Rashidi Fakari, Fahimeh; Tabatabaeichehr, Mahbubeh; Kamali, Hossian; Rashidi Fakari, Farzaneh; Naseri, Maryam

2015-01-01

Introduction: Anxiety increases significantly during labor, especially among nulliparous women. Such anxiety may affect the progress of labor and physiological parameters. The use of essential oils of aromatic plants, or aromatherapy, is a non-invasive procedure that can decrease childbirth anxiety. This study examined the effect of inhalation of the aroma of geranium essential oil on the level of anxiety and physiological parameters of nulliparous women in the first stage of labor. Methods: In study, was carried out on 100 nulliparous women admitted to Bent al-Hoda Hospital in the city of Bojnord in North Khorasan province of Iran during 2012-2013. The women were randomly assigned to two groups of equal size, one experimental group (geranium essential oil) and one control (placebo) group. Anxiety levels were measured using Spielberger' questionnaire before and after intervention. Physiological parameters (systolic and diastolic blood pressure, respiratory rate, pulse rate) were also measured before and after intervention in both groups. Data analysis was conducted using the x2 test, paired t-test, Mann-Whitney U test, and Wilcox on test on SPSS 11.5. Results: The mean anxiety score decreased significantly after inhalation of the aroma of geranium essential oil. There was also a significant decrease in diastolic blood pressure. Conclusion: Aroma of essential oil of geraniums can effectively reduce anxiety during labor and can be recommended as a non-invasive anti-anxiety aid during childbirth. PMID:26161367

Use of plant extracts as an efficient alternative therapy of respiratory tract infections.

PubMed

Šmejkal, Karel; Rjašková, Veronika

Medicinal plants are advantageously used in the treatment of respiratory tract diseases. Upper respiratory tract catarrh is one of the diseases associated with seasonal weakening of immunity, and therefore, plant drugs with a non-specific immunomodulation effect are often used. Such plants include, but are not limited to, Echinacea (Echinacea purpurea) and American ginseng (Panax quinquefolius). In combination with medicinal plants having antibacterial and antiseptic effects, such as thyme (Thymus vulgaris) and pelargonium (Pelargonium sidoides), they can constitute efficient help in the treatment of respiratory tract diseases, shorten the duration of the disease and reduce the need of antibiotic therapy. The text presented summarizes the basic information about these plants, their ingredients, mechanisms of action and clinical tests confirming their effect and monitoring eventual adverse effects.Key words: Echinacea purpurea Panax quinquefolius Pelargonium sidoides Thymus vulgaris upper respiratory tract catarrh immunity.

Design and development of aqueous nanoformulations for mosquito control.

PubMed

Montefuscoli, Antonela Rita; Werdin González, Jorge Omar; Palma, Santiago Daniel; Ferrero, Adriana Alicia; Fernández Band, Beatriz

2014-02-01

Microemulsions (ME) are thermodynamically stable isotropic mixtures of oil, water, and surfactant; they would also be attractive as potential insecticidal products due to the high bioviability of the active ingredient, attributable to the small sizes of the oil drops. A laboratory study was conducted in order to compare the biological effect of oil in water (o/w) geranium essential oil (EO) and geraniol MEs and emulsions, against Culex pipiens pipiens mosquito larvae. The systems were based on three nonionic surfactants (Cremophor EL, Brij 35, Tween 80). The MEs showed dispersed phase diameters in the range of 8 to 14 nm and had low PDI values (<0.2). The MEs were analyzed by TEM, indicating that they had nearly spherical morphology. The microemulsified systems based on geranium EO and those of geraniol produced a notable increase of the larvicidal activity when compared with the respectably emulsions, concluding that the biological effect is related with the diameter of the dispersed phase. The smallest drops achieved the highest larvicidal activity, being the aqueous nanoformulations based on geraniol most effective than those of geranium EO. However, geranium microemulsions are preferred due to their residual toxicological profiles. The results indicate that these novel systems could be used in integrated pest management program for the C. pipiens pipiens.

Field demonstration of age dependent increase in lead phytoextraction by Pelargonium cultivar

NASA Astrophysics Data System (ADS)

Shahid, Muhammad; Arshad, Muhammad; Pinelli, Eric; Alric, Alain; Kaemmerer, Michel; Pradere, Philippe; Dumat, Camille

2013-04-01

Unnecessary for living organisms, lead (Pb) is one of the major widespread toxic metals found in the environment with potential danger to human health and to ecosystems (Shahid et al. 2012). Lead is known to induce a broad range of toxic effects to living organism, including those that are morphological, physiological and biochemical in origin (Pourrut et al. 2011). A field study was carried out in the vicinity of Pb recycling plant near Toulouse-France, and contaminated by atmospheric fallouts to evaluate lead extraction and uptake efficiency of hyperaccumulater Attar of Roses Pelargonium cultivar. It was found that Attar of Roses has ability to accumulate (8644 mgPb/kg DW plant) and survive on highly contaminated acidic soil (39250 mg kg-1 of total Pb) without any morpho-phytotoxicity symptoms. Moreover Attar showed increased extraction of lead from bulk soil to rhizosphere through Pb mobilization and ultimately increased uptake by roots and translocation to shoots. The studied contaminated soil could be cleaned up in few years by planting hyperaccumulater Attar of Rose for longer time period. Under optimum fertlization, irrigation and use of natural or synthetic chelates (EDTA, LMOWA, humic substances etc.) along with old Attar of rose plants, time requires for complete remediation of contaminated site can be reduced to practically applicable time period. Moreover, the use of Pelargonium for remediation has several additional practical, esthetical and economic advantages. The extraction of value-added essential oils from harvested biomass could offset the cost of deploying phytoremediation and renders it as a viable approach for remediating highly contaminated soils, on large scale. Keywords: metal uptake, Pelargonium, phytoremediation, cultivar, soil-plant transfer and kinetic. References Pourrut, B., Shahid, M., Dumat, C., Winterton, P., Pinelli, E., 2011a. Lead uptake, toxicity and detoxification in plants. Rev. Environ. Contam. Toxicol. 213, 113-136. Shahid, M., Arshad, M., Kaemmerer, M., Pinelli, E., Probst, A., Baque, D., Pradere, P., Dumat, C., 2012a. Long term field metal extraction by pelargonium: Phytoextraction efficiency in relation with plant maturity. Inter. J. Phytorem. 14, 493-505.

Lethal activity of individual and mixed monoterpenoids of geranium essential oil on Musca domestica.

PubMed

Gallardo, Anabella; Picollo, María Inés; Mougabure-Cueto, Gastón

2015-03-01

Plant essential oils and its constituent molecules have been suggested as an alternative to control insect. The contribution of the constituents to the effect of the oil is determined by the interactions occurring between them. Synergistic interactions would improve the insecticide efficacy of the compounds due to the utilization of lower doses. We evaluated the insecticidal activity of geranium (Geranium maculatum L.) oil and its major constituents against Musca domestica L. and studied the toxic interactions in artificial mixtures of those constituents in the natural ratio. While synergistic interactions were determined in house fly in this study, these were of low intensity evidencing that the effect of each constituent was slightly modified by the other constituents present in the mixtures. The search for synergism between components is a strategy to improve the insecticide activity of natural compounds. The synergism helps to reduce the environmental and toxicological impact due to the reduction of the dose of use.

Fractionation of the more active extracts of Geranium molle L.: a relationship between their phenolic profile and biological activity.

PubMed

Graça, V C; Dias, Maria Inês; Barros, Lillian; Calhelha, Ricardo C; Santos, P F; Ferreira, Isabel C F R

2018-04-25

Geranium molle L., commonly known as Dove's-foot Crane's-bill or Dovesfoot Geranium, is an herbaceous plant belonging to the Geraniaceae family. Contrary to many other Geranium species, the bioactivity and the phytochemical composition of G. molle seem not to have attracted attention until a recent study from our group regarding the bioactivity of several aqueous and organic extracts of the plant. In particular, we assessed the cytotoxic activity of these extracts against several human tumor cell lines (breast, lung, cervical and hepatocellular carcinomas) and a non-tumor porcine liver primary cell line, inspired by an ethnopharmacological report describing the traditional use of this medicinal plant in some regions of Northeast Portugal for the treatment of cancer. Following this preliminary evaluation, the most active extracts (acetone and methanol) were fractionated by column chromatography and the resulting fractions were evaluated for their antioxidant activity and cytotoxicity against the same cell lines. The bio-guided fractionation of the extracts resulted in several fractions exhibiting improved bioactivity in comparison with the corresponding crude extracts. The fractions obtained from the acetone extract consistently displayed the lowest EC50 and GI50 values and presented the highest content of total phenolic compounds. The phytochemical composition of the most bioactive fractions of the acetone and methanol extracts was also determined and about thirty compounds, mainly flavonoids and phenolic acids, could be identified for the first time in G. molle.

Changes in leaf water relations, gas exchange, growth and flowering quality in potted geranium plants irrigated with different water regimes.

PubMed

Sánchez-Blanco, Ma Jesús; Alvarez, Sara; Navarro, Alejandra; Bañón, Sebastián

2009-03-15

Geranium plants are an important part of urban green areas but suffer from drought, especially when grown in containers with a limited volume of medium. In this experiment, we examined the response of potted geraniums to different irrigation levels. Geranium (Pelargoniumxhortorum L.) seedlings were grown in a growth chamber and exposed to three irrigation treatments, whereby the plants were irrigated to container capacity (control), 60% of the control (moderate deficit irrigation, MDI), or 40% of the control (severe deficit irrigation, SDI). Deficit irrigation was maintained for 2 months, and then all the plants were exposed to a recovery period of 112 month. Exposure to drought induced a decrease in shoot dry weight and leaf area and an increase in the root/shoot ratio. Height and plant width were significantly inhibited by the SDI, while flower color parameters were not affected by deficit treatment. The number of wilting and yellow leaves increased, coinciding with the increase in the number of inflorescences and open flowers. Deficit irrigation led to a leaf water potential of about -0.8MPa at midday, which could have caused an important decrease in stomatal conductance, affecting the photosynthetic rate (Pn). Chlorophyll fluorescence (Fvm) values of 0.80 in all treatments throughout the experiment demonstrate the lack of drought-induced damage to PSII photochemistry. Pressure-volume analysis revealed low osmotic adjustment values of 0.2MPa in the SDI treatment, accompanied by increases in the bulk tissue elastic modulus (epsilon, wall rigidity) and resulting in turgor loss at lower leaf water potential values (-1.38MPa compared with -1.0MPa for the control). Leaf water potential values throughout the experiment below those for Psitlp were not found at any sampling time. By the end of the recovery period, the leaf water potential, stomatal conductance and net photosynthesis had recovered. We infer from these results that moderate deficit irrigation in geranium reduced the consumption of water, while maintaining the good overall quality of plants. However, when SDI was applied, a reduction in the number of flowers per plant was observed.

Evaluation of anti-Candida potential of geranium oil constituents against clinical isolates of Candida albicans differentially sensitive to fluconazole: inhibition of growth, dimorphism and sensitization.

PubMed

Zore, Gajanan B; Thakre, Archana D; Rathod, V; Karuppayil, S Mohan

2011-07-01

Fluconazole (FLC) susceptibility of isolates of Candida spp., (n = 42) and efficacy as well as mechanism of anti-Candida activity of three constituents of geranium oil is evaluated in this study. No fluconazole resistance was observed among the clinical isolates tested, however 22% were susceptible-dose-dependent (S-DD) [minimal inhibitory concentration (MIC) ≥ 16 μg ml(-1)] and a standard strain of C. albicans ATCC 10231 was resistant (≥ 64 μg ml(-1)). Geraniol and geranyl acetate were equally effective, fungicidal at 0.064% v/v concentrations i.e. MICs (561 μg ml(-1) and 584 μg ml(-1) respectively) and killed 99.9% inoculum within 15 and 30 min of exposures respectively. Citronellol was least effective and fungistatic. C. albicans dimorphism (Y → H) was highly sensitive to geranium oil constituents tested (IC50 approximately 0.008% v/v). Geraniol, geranyl acetate and citronellol brought down MICs of FLC by 16-, 32- and 64-fold respectively in a FLC-resistant strain. Citronellol and geraniol arrested cells in G1 phase while geranyl acetate in G2-M phase of cell cycle at MIC(50). In vitro cytotoxicity study revealed that geraniol, geranyl acetate and citronellol were non-toxic to HeLa cells at MICs of the C. albicans growth. Our results indicate that two of the three geranium oil constituents tested exhibit excellent anti-Candida activity and significant synergistic activity with fluconazole. © 2010 Blackwell Verlag GmbH.

A promising strain of Streptomyces sp. with agricultural traits for growth promotion and disease management.

PubMed

Alam, Mansoor; Dharni, Seema; Abdul-Khaliq; Srivastava, Santosh Kumar; Samad, Abdul; Gupta, Mahesh Kumar

2012-08-01

A bacterial strain, Streptomyces sp. CIMAP- A1 was isolated from Geranium rhizosphere and identified by morphological, physiological, biochemical and molecular characters (16S rDNA gene sequence). Phylogenetically, it was found most closely related to S. vinacendrappus, strain NRRL-2363 with 99% sequence similarity. The strain had potential antagonistic activity (in vitro) against wide range of phytopathogenic fungi like Stemphylium sp., Botrytis cinerea, Sclerotinia sclerotiorum, Colletotrichum spp., Curvularia spp., Corynespora cassicola and Thielavia basicola. The extracellular secondary metabolites produced by the strain in the culture filtrates significantly inhibited the spore germination, growth of germ tube of the germinated spores and radial growth of Alternaria alternata, Colletotrichum acutatum, Curvularia andropogonis and Fusarium moniliforme. The extraction of culture filtrate with solvents and purification by following VLC and PTLC methods always yielded a 10th fraction antifungal compound showing activity against wide range of phytopathogenic fungi. The strain was able to produce siderophores and indole-3-acetic acid. The strain was found to enhance the growth and biomass production of Geranium. It increased 11.3% fresh shoot biomass of Geranium and 21.7% essential oil yield.

Long-term field metal extraction by Pelargonium: phytoextraction efficiency in relation to plant maturity.

PubMed

Shahid, Muhammad; Arshad, Muhammad; Kaemmerer, Michel; Pinelli, Eric; Probst, Anne; Baque, David; Pradere, Philippe; Dumat, Camille

2012-01-01

The long length of periods required for effective soil remediation via phytoextraction constitutes a weak point that reduces its industrial use. However, these calculated periods are mainly based on short-term and/or hydroponic controlled experiments. Moreover, only a few studies concern more than one metal, although soils are scarcely polluted by only one element. In this scientific context, the phytoextraction of metals and metalloids (Pb, Cd, Zn, Cu, and As) by Pelargonium was measured after a long-term field experiment. Both bulk and rhizosphere soils were analyzed in order to determine the mechanisms involved in soil-root transfer. First, a strong increase in lead phytoextraction was observed with plant maturity, significantly reducing the length of the period required for remediation. Rhizosphere Pb, Zn, Cu, Cd, and As accumulation was observed (compared to bulk soil), indicating metal mobilization by the plant, perhaps in relation to root activity. Moreover, metal phytoextraction and translocation were found to be a function of the metals' nature. These results, taken altogether, suggest that Pelargonium could be used as a multi-metal hyperaccumulator under multi-metal soil contamination conditions, and they also provide an interesting insight for improving field phytoextraction remediation in terms of the length of time required, promoting this biological technique.

Retention of Antibacterial Activity in Geranium Plasma Polymer Thin Films

PubMed Central

Al-Jumaili, Ahmed; Bazaka, Kateryna

2017-01-01

Bacterial colonisation of biomedical devices demands novel antibacterial coatings. Plasma-enabled treatment is an established technique for selective modification of physicochemical characteristics of the surface and deposition of polymer thin films. We investigated the retention of inherent antibacterial activity in geranium based plasma polymer thin films. Attachment and biofilm formation by Staphylococcus aureus, Pseudomonas aeruginosa, and Escherichia coli was significantly reduced on the surfaces of samples fabricated at 10 W radio frequency (RF) power, compared to that of control or films fabricated at higher input power. This was attributed to lower contact angle and retention of original chemical functionality in the polymer films fabricated under low input power conditions. The topography of all surfaces was uniform and smooth, with surface roughness of 0.18 and 0.69 nm for films fabricated at 10 W and 100 W, respectively. Hardness and elastic modules of films increased with input power. Independent of input power, films were optically transparent within the visible wavelength range, with the main absorption at ~290 nm and optical band gap of ~3.6 eV. These results suggest that geranium extract-derived polymers may potentially be used as antibacterial coatings for contact lenses. PMID:28902134

Herbivore pressure by weevils associated with flower color polymorphism in Geranium thunbergii (Geraniaceae).

PubMed

Tsuchimatsu, Takashi; Yoshitake, Hiraku; Ito, Motomi

2014-03-01

Although floral herbivory has recently received increased attention as an important factor influencing plant reproduction, relatively little is known about how its frequency and intensity vary depending on traits of host plants. Here we report that herbivore pressure by a weevil, Zacladus geranii, is associated with a flower color polymorphism of Geranium thunbergii (Geraniaceae). Pink and white flower color morphs have been reported in G. thunbergii, and we found in a three-year field survey in multiple populations that, generally, adult weevils more preferentially visited white flowers than pink flowers. Consistently, we found more severe damage by weevil larvae in white flowers. Overall herbivore pressure for G. thunbergii varied strongly between populations, and the difference seems to be partly explained by the co-occurrence of a related plant species, Geranium yezoense, in a population, as weevils preferred it to both color morphs of G. thunbergii, thereby relaxing overall herbivore pressure for G. thunbergii. Nonetheless, despite such high variability, the preference of weevils for white morphs over pink morphs of G. thunbergii was found across multiple populations. We discuss possible mechanisms causing the association between flower color and herbivore preference as well as its evolutionary consequences.

Divergent trait and environment relationships among parallel radiations in Pelargonium (Geraniaceae): a role for evolutionary legacy?

PubMed

Moore, Timothy E; Schlichting, Carl D; Aiello-Lammens, Matthew E; Mocko, Kerri; Jones, Cynthia S

2018-05-11

Functional traits in closely related lineages are expected to vary similarly along common environmental gradients as a result of shared evolutionary and biogeographic history, or legacy effects, and as a result of biophysical tradeoffs in construction. We test these predictions in Pelargonium, a relatively recent evolutionary radiation. Bayesian phylogenetic mixed effects models assessed, at the subclade level, associations between plant height, leaf area, leaf nitrogen content and leaf mass per area (LMA), and five environmental variables capturing temperature and rainfall gradients across the Greater Cape Floristic Region of South Africa. Trait-trait integration was assessed via pairwise correlations within subclades. Of 20 trait-environment associations, 17 differed among subclades. Signs of regression coefficients diverged for height, leaf area and leaf nitrogen content, but not for LMA. Subclades also differed in trait-trait relationships and these differences were modulated by rainfall seasonality. Leave-one-out cross-validation revealed that whether trait variation was better predicted by environmental predictors or trait-trait integration depended on the clade and trait in question. Legacy signals in trait-environment and trait-trait relationships were apparently lost during the earliest diversification of Pelargonium, but then retained during subsequent subclade evolution. Overall, we demonstrate that global-scale patterns are poor predictors of patterns of trait variation at finer geographic and taxonomic scales. © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.

Laboratory evaluation of four commercial repellents against larval Leptotrombidium deliense (Acari: Trombiculidae).

PubMed

Hanifah, Azima Laili; Ismail, Siti Hazar Awang; Ming, Ho Tze

2010-09-01

Four commercial repellents were evaluated in the laboratory against Leptotrombidium deliense chiggers. Both in vitro and in vivo methods were used to determine repellency of the compounds. The repellents were Kellis (containing citronella oil, jojoba oil and tea tree oil), Kaps (containing citronella oil), BioZ (containing citronella oil, geranium oil and lemon grass oil) and Off (containing DEET). The combination of three active ingredients: citronella oil, geranium oil, lemon grass oil gave the highest repellency (87%) followed by DEET (84%). In vitro repellencies ranged from 73% to 87%. There was no significant difference between the four products. All the repellents had 100% in vivo repellency compared to 41-57% for the controls.

Anti-Candida activity assessment of Pelargonium graveolens oil free and nanoemulsion in biofilm formation in hospital medical supplies.

PubMed

Giongo, Janice Luehring; de Almeida Vaucher, Rodrigo; Fausto, Viviane Pedroso; Quatrin, Priscilla Maciel; Lopes, Leonardo Quintana Soares; Santos, Roberto Christ Vianna; Gündel, André; Gomes, Patrícia; Steppe, Martin

2016-11-01

Infections due to microbial biofilm formation on the surface of catheters and other medical devices are constantly reported as a major cause of morbidity and mortality in patients admitted to hospitals. Furthermore, sessile cells are more resistant to phagocytosis and most antimicrobial, which complicates the treatment of such infections. Researches aimed at new antimicrobial originating mainly from plants have increased in recent years and the development of new strategies for their release is critical in combating the formation of biofilms. Geranium oil (GO) has proven antimicrobial activity. Because of this, the aim of this study was to develop nanoemulsions containing this oil (NEG) and evaluate its activity after the biofilm formation of Candida albicans, Candida tropicalis, Candida glabrata, and Candida krusei in hospital medical supplies. For quantification of the biofilm, crystal violet, total protein, and ATP-bioluminescence assays were used. The results revealed that GO and NEG showed lower MIC for C. albicans and C. tropicalis. The biofilms formed by different species of Candida on the surfaces of polyethylene and polyurethane were quantified. GO and NEG significantly inhibited the formation of biofilms in all species tested on the surfaces of polyethylene. However, NEG antibiofilm has had better activity than GO for C. albicans, C. tropicalis and C. glabrata, according to the surface potential analysis by atomic force microscopy (AFM). The analysis of the biofilm formation on the polyethylene surface by ATP-bioluminescence and CFU showed similar results. In both methods the formation of biofilm in the catheter occurred in greater quantity for C. albicans and C. tropicalis. GO did not significantly inhibit the formation of biofilms only in C. krusei, although NEG significantly increased this activity GO in all species tested when compared to the control training biofilm. The following study shows that the development of NEG may become an effective alternative to reduce the adhesion of microorganisms and prevent infections resulting from the use of some hospital medical materials. Copyright © 2016 Elsevier Ltd. All rights reserved.

Comparative analyses of two Geraniaceae transcriptomes using next-generation sequencing.

PubMed

Zhang, Jin; Ruhlman, Tracey A; Mower, Jeffrey P; Jansen, Robert K

2013-12-29

Organelle genomes of Geraniaceae exhibit several unusual evolutionary phenomena compared to other angiosperm families including accelerated nucleotide substitution rates, widespread gene loss, reduced RNA editing, and extensive genomic rearrangements. Since most organelle-encoded proteins function in multi-subunit complexes that also contain nuclear-encoded proteins, it is likely that the atypical organellar phenomena affect the evolution of nuclear genes encoding organellar proteins. To begin to unravel the complex co-evolutionary interplay between organellar and nuclear genomes in this family, we sequenced nuclear transcriptomes of two species, Geranium maderense and Pelargonium x hortorum. Normalized cDNA libraries of G. maderense and P. x hortorum were used for transcriptome sequencing. Five assemblers (MIRA, Newbler, SOAPdenovo, SOAPdenovo-trans [SOAPtrans], Trinity) and two next-generation technologies (454 and Illumina) were compared to determine the optimal transcriptome sequencing approach. Trinity provided the highest quality assembly of Illumina data with the deepest transcriptome coverage. An analysis to determine the amount of sequencing needed for de novo assembly revealed diminishing returns of coverage and quality with data sets larger than sixty million Illumina paired end reads for both species. The G. maderense and P. x hortorum transcriptomes contained fewer transcripts encoding the PLS subclass of PPR proteins relative to other angiosperms, consistent with reduced mitochondrial RNA editing activity in Geraniaceae. In addition, transcripts for all six plastid targeted sigma factors were identified in both transcriptomes, suggesting that one of the highly divergent rpoA-like ORFs in the P. x hortorum plastid genome is functional. The findings support the use of the Illumina platform and assemblers optimized for transcriptome assembly, such as Trinity or SOAPtrans, to generate high-quality de novo transcriptomes with broad coverage. In addition, results indicated no major improvements in breadth of coverage with data sets larger than six billion nucleotides or when sampling RNA from four tissue types rather than from a single tissue. Finally, this work demonstrates the power of cross-compartmental genomic analyses to deepen our understanding of the correlated evolution of the nuclear, plastid, and mitochondrial genomes in plants.

Comparative analyses of two Geraniaceae transcriptomes using next-generation sequencing

PubMed Central

2013-01-01

Background Organelle genomes of Geraniaceae exhibit several unusual evolutionary phenomena compared to other angiosperm families including accelerated nucleotide substitution rates, widespread gene loss, reduced RNA editing, and extensive genomic rearrangements. Since most organelle-encoded proteins function in multi-subunit complexes that also contain nuclear-encoded proteins, it is likely that the atypical organellar phenomena affect the evolution of nuclear genes encoding organellar proteins. To begin to unravel the complex co-evolutionary interplay between organellar and nuclear genomes in this family, we sequenced nuclear transcriptomes of two species, Geranium maderense and Pelargonium x hortorum. Results Normalized cDNA libraries of G. maderense and P. x hortorum were used for transcriptome sequencing. Five assemblers (MIRA, Newbler, SOAPdenovo, SOAPdenovo-trans [SOAPtrans], Trinity) and two next-generation technologies (454 and Illumina) were compared to determine the optimal transcriptome sequencing approach. Trinity provided the highest quality assembly of Illumina data with the deepest transcriptome coverage. An analysis to determine the amount of sequencing needed for de novo assembly revealed diminishing returns of coverage and quality with data sets larger than sixty million Illumina paired end reads for both species. The G. maderense and P. x hortorum transcriptomes contained fewer transcripts encoding the PLS subclass of PPR proteins relative to other angiosperms, consistent with reduced mitochondrial RNA editing activity in Geraniaceae. In addition, transcripts for all six plastid targeted sigma factors were identified in both transcriptomes, suggesting that one of the highly divergent rpoA-like ORFs in the P. x hortorum plastid genome is functional. Conclusions The findings support the use of the Illumina platform and assemblers optimized for transcriptome assembly, such as Trinity or SOAPtrans, to generate high-quality de novo transcriptomes with broad coverage. In addition, results indicated no major improvements in breadth of coverage with data sets larger than six billion nucleotides or when sampling RNA from four tissue types rather than from a single tissue. Finally, this work demonstrates the power of cross-compartmental genomic analyses to deepen our understanding of the correlated evolution of the nuclear, plastid, and mitochondrial genomes in plants. PMID:24373163

Repellent effectiveness of seven plant essential oils, sunflower oil and natural insecticides against horn flies on pastured dairy cows and heifers.

PubMed

Lachance, S; Grange, G

2014-06-01

Plant essential oils (basil, geranium, balsam fir, lavender, lemongrass, peppermint, pine and tea tree), mixed with either sunflower oil or ethyl alcohol, were applied at 5% concentrations to the sides of Holstein cattle. Pastured cattle treated with essential oils diluted in sunflower oil had less flies than the untreated control for a 24-h period. However, the essential oil treatments were not significantly different than the carrier oil alone. Barn-held heifers treated with essential oils and sunflower oil alone had significantly less flies than the untreated control for up to 8 h after treatment. Basil, geranium, lavender, lemongrass and peppermint repelled more flies than sunflower oil alone for a period ranging from 1.5 to 4 h after treatments applied to heifers. All essential oils repelled > 75% of the flies on the treated area for 6 and 8 h on pastured cows and indoor heifers, respectively. Geranium, lemongrass and peppermint stayed effective for a longer duration. Essential oils mixed with ethyl alcohol demonstrated less repellence than when mixed with the carrier oil. Safer's soap, natural pyrethrins without piperonyl butoxide and ethyl alcohol alone were not efficient at repelling flies. Essential oils could be formulated for use as fly repellents in livestock production. © 2013 The Royal Entomological Society.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stulberg, Michael J.; Huang, Qi

Ralstonia solanacearum race 3 biovar 2 strains belonging to phylotype IIB, sequevars 1 and 2 (IIB-1&2) cause brown rot of potato in temperate climates, and are quarantined pathogens in Canada and Europe. Since these strains are not established in the U.S. and because of their potential risk to the potato industry, the U.S. government has listed them as select agents. Cultivated geraniums are also a host and have the potential to spread the pathogen through trade, and its extracts strongly inhibits DNA-based detection methods. We designed four primer and probe sets for an improved qPCR method that targets stable regionsmore » of DNA. RsSA1 and RsSA2 recognize IIB-1&2 strains, RsII recognizes the current phylotype II (the newly proposed R. solanacearum species) strains (and a non-plant associated R. mannitolilytica), and Cox1 recognizes eight plant species including major hosts of R. solanacearum such as potato, tomato and cultivated geranium as an internal plant control. We multiplexed the RsSA2 with the RsII and Cox1 sets to provide two layers of detection of a positive IIB-1&2 sample, and to validate plant extracts and qPCR reactions. The TaqMan-based uniplex and multiplex qPCR assays correctly identified 34 IIB-1&2 and 52 phylotype II strains out of 90 R. solanacearum species complex strains. Additionally, the multiplex qPCR assay was validated successfully using 169 artificially inoculated symptomatic and asymptomatic plant samples from multiple plant hosts including geranium. Moreover, we developed an extraction buffer that allowed for a quick and easy DNA extraction from infected plants including geranium for detection of R. solanacearum by qPCR. Our multiplex qPCR assay, especially when coupled with the quick extraction buffer method, allows for quick, easy and reliable detection and differentiation of the IIB-1&2 strains of R. solanacearum.« less

A TaqMan-Based Multiplex qPCR Assay and DNA Extraction Method for Phylotype IIB Sequevars 1&2 (Select Agent) Strains of Ralstonia solanacearum

PubMed Central

Stulberg, Michael J.; Huang, Qi

2015-01-01

Ralstonia solanacearum race 3 biovar 2 strains belonging to phylotype IIB, sequevars 1 and 2 (IIB-1&2) cause brown rot of potato in temperate climates, and are quarantined pathogens in Canada and Europe. Since these strains are not established in the U.S. and because of their potential risk to the potato industry, the U.S. government has listed them as select agents. Cultivated geraniums are also a host and have the potential to spread the pathogen through trade, and its extracts strongly inhibits DNA-based detection methods. We designed four primer and probe sets for an improved qPCR method that targets stable regions of DNA. RsSA1 and RsSA2 recognize IIB-1&2 strains, RsII recognizes the current phylotype II (the newly proposed R. solanacearum species) strains (and a non-plant associated R. mannitolilytica), and Cox1 recognizes eight plant species including major hosts of R. solanacearum such as potato, tomato and cultivated geranium as an internal plant control. We multiplexed the RsSA2 with the RsII and Cox1 sets to provide two layers of detection of a positive IIB-1&2 sample, and to validate plant extracts and qPCR reactions. The TaqMan-based uniplex and multiplex qPCR assays correctly identified 34 IIB-1&2 and 52 phylotype II strains out of 90 R. solanacearum species complex strains. Additionally, the multiplex qPCR assay was validated successfully using 169 artificially inoculated symptomatic and asymptomatic plant samples from multiple plant hosts including geranium. Furthermore, we developed an extraction buffer that allowed for a quick and easy DNA extraction from infected plants including geranium for detection of R. solanacearum by qPCR. Our multiplex qPCR assay, especially when coupled with the quick extraction buffer method, allows for quick, easy and reliable detection and differentiation of the IIB-1&2 strains of R. solanacearum. PMID:26426354

The vapor activity of oregano, perilla, tea tree, lavender, clove, and geranium oils against a Trichophyton mentagrophytes in a closed box.

PubMed

Inouye, Shigeharu; Nishiyama, Yayoi; Uchida, Katsuhisa; Hasumi, Yayoi; Yamaguchi, Hideyo; Abe, Shigeru

2006-12-01

The vapor activity of six essential oils against a Trichophyton mentagrophytes was examined using a closed box. The antifungal activity was determined from colony size, which was correlated with the inoculum size. As judged from the minimum inhibitory dose and the minimum fungicidal dose determined after vapor exposure for 24 h, the vapor activity of the six essential oils was ranked in the following order: oregano > clove, perilla > geranium, lavender, tea tree. The vapors of oregano, perilla, tea tree, and lavender oils killed the mycelia by short exposure, for 3 h, but the vapors of clove and geranium oils were only active after overnight exposure. The vapor of oregano and other oils induced lysis of the mycelia. Morphological examination by scanning electron microscope (SEM) revealed that the cell membrane and cell wall were damaged in a dose- and time-dependent manner by the action of oregano vapor, causing rupture and peeling of the cell wall, with small bulges coming from the cell membrane. The vapor activity increased after 24 h, but mycelial accumulation of the active oil constituents was maximized around 15 h, and then decreased in parallel with the decrease of vapor concentration. This suggested that the active constituent accumulated on the fungal cells around 15 h caused irreversible damage, which eventually led to cellular death.

A TaqMan-based multiplex qPCR assay and DNA extraction method for phylotype IIB sequevars 1&2 (select agent) strains of Ralstonia solanacearum

DOE PAGES

Stulberg, Michael J.; Huang, Qi

2015-10-01

Ralstonia solanacearum race 3 biovar 2 strains belonging to phylotype IIB, sequevars 1 and 2 (IIB-1&2) cause brown rot of potato in temperate climates, and are quarantined pathogens in Canada and Europe. Since these strains are not established in the U.S. and because of their potential risk to the potato industry, the U.S. government has listed them as select agents. Cultivated geraniums are also a host and have the potential to spread the pathogen through trade, and its extracts strongly inhibits DNA-based detection methods. We designed four primer and probe sets for an improved qPCR method that targets stable regionsmore » of DNA. RsSA1 and RsSA2 recognize IIB-1&2 strains, RsII recognizes the current phylotype II (the newly proposed R. solanacearum species) strains (and a non-plant associated R. mannitolilytica), and Cox1 recognizes eight plant species including major hosts of R. solanacearum such as potato, tomato and cultivated geranium as an internal plant control. We multiplexed the RsSA2 with the RsII and Cox1 sets to provide two layers of detection of a positive IIB-1&2 sample, and to validate plant extracts and qPCR reactions. The TaqMan-based uniplex and multiplex qPCR assays correctly identified 34 IIB-1&2 and 52 phylotype II strains out of 90 R. solanacearum species complex strains. Additionally, the multiplex qPCR assay was validated successfully using 169 artificially inoculated symptomatic and asymptomatic plant samples from multiple plant hosts including geranium. Moreover, we developed an extraction buffer that allowed for a quick and easy DNA extraction from infected plants including geranium for detection of R. solanacearum by qPCR. Our multiplex qPCR assay, especially when coupled with the quick extraction buffer method, allows for quick, easy and reliable detection and differentiation of the IIB-1&2 strains of R. solanacearum.« less

Interspecific variation in SO/sub 2/ flux: leaf surface versus internal flux, and components of leaf conductance. [Pisum sativum L. , Lycopersicon esculentum Mill. Flacca, Geranium carolinianum L. , Diplacus aurantiacus (Curtis) Jeps

DOE Office of Scientific and Technical Information (OSTI.GOV)

Olszyk, D.M.; Tingey, D.T.

The objective of this study was to clarify the relationships among stomatal, residual, and epidermal conductances in determining the flux of SO/sub 2/ air pollution to leaves. Variations in leaf SO/sub 2/ and H/sub 2/O vapor fluxes were determined using four plant species: Pisum sativum L. (garden pea), Lycopersicon esculentum Mill. flacca (mutant of tomato), Geranium carolinianum L. (wild geranium), and Diplacus aurantiacus (Curtis) Jeps. (a native California shrub). Fluxes were measured using the mass-balance approach during exposure to 4.56 micromoles per cubic meter (0.11 microliters per liter) SO/sub 2/ for 2 hours in a controlled environmental chamber. Flux throughmore » adaxial and abaxial leaf surfaces with closed stomata ranged from 1.9 to 9.4 nanomoles per square meter per second for SO/sub 2/, and 0.3 to 1.3 millimoles per square meter per second for H/sub 2/O vapor. Flux of SO/sub 2/ into leaves through stomata ranged from approx.0 to 8.5 (dark) and 3.8 to 16.0 (light) millimoles per square meter per second. Flux of H/sub 2/O vapor from leaves through stomata ranged from approx.0 to 0.6 (dark) to 0.4 to 0.9 (light) millimole per square meter per second. Lycopersicon had internal flux rates for both SO/sub 2/ and H/sub 2/O vapor over twice as high as for the other species. Stomatal conductance based on H/sub 2/O vapor flux averaged from 0.07 to 0.13 mole per square meter per second among the four species. Internal conductance of SO/sub 2/ as calculated from SO/sub 2/ flux was from 0.04 mole per square meter per second lower to 0.06 mole per square meter per second higher than stomatal conductance. For Pisum, Geranium, and Diplacus stomatal conductance was the same or slightly higher than internal conductance, indicating that, in general, SO/sub 2/ flux could be predicted from stomatal conductance for H/sub 2/O vapor.« less

Biological activity of some Patagonian plants.

PubMed

Cuadra, Pedro; Furrianca, María; Oyarzún, Alejandra; Yáñez, Erwin; Gallardo, Amalia; Fajardo, Víctor

2005-12-01

Citotoxicity (inhibition of cell division in fertilized eggs of Loxechinus albus) and general toxicity (using embryos of Artemia salina) of plants belonging to the genera Senecio, Deschampsia, Alstroemeria, Anarthrophyllum, Chloraea and Geranium were investigated.

Arabinogalactan-proteins stimulate somatic embryogenesis and plant propagation of Pelargonium sidoides.

PubMed

Duchow, Stefanie; Dahlke, Renate I; Geske, Thomas; Blaschek, Wolfgang; Classen, Birgit

2016-11-05

Root extracts of the medicinal plant Pelargonium sidoides, native to South Africa, are used globally for the treatment of common cold and cough. Due to an increasing economic commercialization of P. sidoides remedies, wild collections of root material should be accompanied by effective methods for plant propagation like somatic embryogenesis. Based on this, the influence of arabinogalactan-proteins (AGPs) on somatic embryogenesis and plant propagation of P. sidoides has been investigated. High-molecular weight AGPs have been isolated from dried roots as well as from cell cultures of P. sidoides with yields between 0.1% and 0.9%, respectively. AGPs are characterized by a 1,3-linked Galp backbone, branched at C6 to 1,6-linked Galp side chains terminated by Araf and to a minor extent by GlcpA, Galp or Rhap. Treatment of explants of P. sidoides with AGPs from roots or suspension culture over 5.5 weeks resulted in effective stimulation of somatic embryo development and plant regeneration. Copyright © 2016. Published by Elsevier Ltd.

Phytochemical composition and antimicrobial activities of the essential oils and organic extracts from pelargonium graveolens growing in Tunisia

PubMed Central

2012-01-01

Background Pelargonium graveolens (P. graveolens) L. is an aromatic and medicinal plant belonging to the geraniacea family. Results The chemical compositions of the essential oil as well as the in vitro antimicrobial activities were investigated. The GC-MS analysis of the essential oil revealed 42 compounds. Linallol L, Citronellol, Geraniol, 6-Octen-1-ol, 3,7-dimethyl, formate and Selinene were identified as the major components. The tested oil and organic extracts exhibited a promising antimicrobial effect against a panel of microorganisms with diameter inhibition zones ranging from 12 to 34 mm and MICs values from 0.039 to10 mg/ml. The investigation of the phenolic content showed that EtOAc, MeOH and water extracts had the highest phenolic contents. Conclusion Overall, results presented here suggest that the essential oil and organic extracts of P. graveolens possesses antimicrobial and properties, and is therefore a potential source of active ingredients for food and pharmaceutical industry. PMID:23216669

[Optimization of extraction process for tannins from Geranium orientali-tibeticum by supercritical CO2 method].

PubMed

Xie, Song; Tong, Zhi-Ping; Tan, Rui; Liu, Xiao-Zhen

2014-08-01

In order to optimize extraction process conditions of tannins from Geranium orientali-tibeticum by supercritical CO2, the content of tannins was determined by phosphomolybdium tungsten acid-casein reaction, with extraction pressure, extraction temper- ature and extraction time as factors, the content of tannins from extract of G. orientali-tibeticum as index, technology conditions were optimized by orthogonal test. Optimum technology conditions were as follows: extraction pressure was 25 MPa, extraction temperature was 50 °C, extracted 1.5 h. The content of tannins in extract was 12.91 mg x g(-1), extract rate was 3.67%. The method established could be used for assay the contents of tannin in G. orientali-tibeticum. The circulated extraction was an effective extraction process that was stable and feasible, and that provides a way of the extraction process conditions of tannin from G. orientali-tibeticum.

Defensive strategies in Geranium sylvaticum. Part 1: organ-specific distribution of water-soluble tannins, flavonoids and phenolic acids.

PubMed

Tuominen, Anu; Toivonen, Eija; Mutikainen, Pia; Salminen, Juha-Pekka

2013-11-01

A combination of high-resolution mass spectrometry and modern HPLC column technology, assisted by diode array detection, was used for accurate characterization of water-soluble polyphenolic compounds in the pistils, stamens, petals, sepals, stems, leaves, roots and seeds of Geranium sylvaticum. The organs contained a large variety of polyphenols, five types of tannins (ellagitannins, proanthocyanidins, gallotannins, galloyl glucoses and galloyl quinic acids) as well as flavonoids and simple phenolic acids. In all, 59 compounds were identified. Geraniin and other ellagitannins dominated in all the green photosynthetic organs. The other organs seem to produce distinctive polyphenol groups: pistils accumulated gallotannins; petals acetylglucose derivatives of galloylglucoses; stamens kaempferol glycosides, and seeds and roots accumulated proanthocyanidins. The intra-plant distribution of the different polyphenol groups may reflect the different functions and importance of various types of tannins as the defensive chemicals against herbivory. Copyright © 2013 Elsevier Ltd. All rights reserved.

One-step separation and purification of hydrolysable tannins from Geranium wilfordii Maxim by adsorption chromatography on cross-linked 12% agarose gel.

PubMed

Liu, Dan; Ma, Yan; Wang, Ye; Su, Zhiguo; Gu, Ming; Janson, Jan-Christer

2011-05-01

The hydrolysable tannins corilagin and geraniin, the major active components of the traditional Chinese medicine Geranium wilfordii Maxim, have been separated and purified from crude extracts in one step by adsorption chromatography on cross-linked 12% agarose gel (Superose 12 10/300 GL). The separation was achieved by gradient elution using mobile phase A composed of 5% ethanol and 5% acetic acid and mobile phase B composed of 30% ethanol and 30% acetic acid. The gradients were composed as follows: 0-240 mL, 0-25% B; 240-480 mL, 25-40% B; after 480 mL, 100% B. The purities of the collected corilagin and geraniin were 92.4 and 87.2%, and the corresponding yields were 88.0 and 76.8%, respectively. Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Patent literature on mosquito repellent inventions which contain plant essential oils--a review.

PubMed

Pohlit, Adrian Martin; Lopes, Norberto Peporine; Gama, Renata Antonaci; Tadei, Wanderli Pedro; Neto, Valter Ferreira de Andrade

2011-04-01

Bites Bites of mosquitoes belonging to the genera Anopheles Meigen, Aedes Meigen, Culex L. and Haemagogus L. are a general nuisance and are responsible for the transmission of important tropical diseases such as malaria, hemorrhagic dengue and yellow fevers and filariasis (elephantiasis). Plants are traditional sources of mosquito repelling essential oils (EOs), glyceridic oils and repellent and synergistic chemicals. A Chemical Abstracts search on mosquito repellent inventions containing plant-derived EOs revealed 144 active patents mostly from Asia. Chinese, Japanese and Korean language patents and those of India (in English) accounted for roughly 3/4 of all patents. Since 1998 patents on EO-containing mosquito repellent inventions have almost doubled about every 4 years. In general, these patents describe repellent compositions for use in topical agents, cosmetic products, incense, fumigants, indoor and outdoor sprays, fibers, textiles among other applications. 67 EOs and 9 glyceridic oils were individually cited in at least 2 patents. Over 1/2 of all patents named just one EO. Citronella [Cymbopogon nardus (L.) Rendle, C.winterianus Jowitt ex Bor] and eucalyptus (Eucalyptus LʼHér. spp.) EOs were each cited in approximately 1/3 of all patents. Camphor [Cinnamomum camphora (L.) J. Presl], cinnamon (Cinnamomum zeylanicum Blume), clove [Syzygium aromaticum (L.) Merr. & L.M. Perry], geranium (Pelargonium graveolens LʼHér.), lavender (Lavandula angustifolia Mill.), lemon [Citrus × limon (L.) Osbeck], lemongrass [Cymbopogon citratus (DC.) Stapf] and peppermint (Mentha × piperita L.) EOs were each cited in > 10% of patents. Repellent chemicals present in EO compositions or added as pure “natural” ingredients such as geraniol, limonene, p-menthane-3,8-diol, nepetalactone and vanillin were described in approximately 40% of all patents. About 25% of EO-containing inventions included or were made to be used with synthetic insect control agents having mosquito repellent properties such as pyrethroids, N,N-diethyl-m-toluamide (DEET), (±)-p-menthane-3,8-diol (PMD) and dialkyl phthalates. Synergistic effects involving one or more EOs and synthetic and/or natural components were claimed in about 10% of all patents. Scientific literature sources provide evidence for the mosquito repellency of many of the EOs and individual chemical components found in EOs used in patented repellent inventions. © Georg Thieme Verlag KG Stuttgart · New York.

Hair growth-promoting effect of Geranium sibiricum extract in human dermal papilla cells and C57BL/6 mice.

PubMed

Boisvert, William A; Yu, Miri; Choi, Youngbin; Jeong, Gi Hee; Zhang, Yi-Lin; Cho, Sunghun; Choi, Changsun; Lee, Sanghyun; Lee, Bog-Hieu

2017-02-13

Geranium sibiricum L. has been used as a medicinal plant to treat diarrhea, bacterial infection, and cancer in Bulgaria, Peru, and Korea. However, its hair growth-promoting effect was not investigated so far. This study examined the effects of Geranium sibiricum L. extract (GSE) on hair growth, using in vitro and in vivo models. Antioxidant, proliferation and migration assay of GSE was performed with human dermal papilla cells (hDPCs). Hair-growth promoting effect was measured in animal model. Relative expression of interleukin-1, vascular endothelial growth factor, hepatocyte growth factor, and transforming growth factor beta 1 was determined by real time RT-PCR. Expression of Ki-67 and stem cell factor were analyzed by immunohistochemistry. GSE treatment proliferated and migrated human dermal papilla cells (hDPCs) more than treatment of 10 μM minoxidil. GSE significantly stimulated the expression of Ki-67 protein and the mRNA levels of hepatocyte growth factor and vascular endothelial growth factor in hDPCs. Topical application of 1,000 ppm GSE for 3 weeks promoted more significant hair growth on shaved C57BL/6 mice than did 5% minoxidil. The histological morphology of hair follicles demonstrated an active anagen phase with the induction of stem cell factor. GSE treatment significantly reduced the number of mast cells and the expression of transforming growth factor beta 1 in mouse skin tissues. These results demonstrated that GSE promotes hair growth in vitro and in vivo by regulating growth factors and the cellular response.

Chemical characterization and bioactive properties of Geranium molle L.: from the plant to the most active extract and its phytochemicals.

PubMed

Graça, V C; Barros, Lillian; Calhelha, Ricardo C; Dias, Maria Inês; Carvalho, Ana Maria; Santos-Buelga, Celestino; Ferreira, Isabel C F R; Santos, P F

2016-05-18

After a period of indifference, in which synthetic compounds were favored, there is an increasing interest in the study of the biological properties of plants and the active principles responsible for their therapeutic properties. Geranium molle L. has been used in the Portuguese folk medicine for the treatment of various ailments including cancer but, unlike many of the species from the Geranium genus, its phytochemical characterization and biological activity are virtually unexplored. In this study a G. molle sample from Trás-os-Montes, north-eastern Portugal, was chemically characterized regarding nutritional value, free sugars, organic acids, fatty acids and tocopherols, and several aqueous (decoction, infusion) and organic (n-hexane, dichloromethane, ethyl acetate, acetone, methanol) extracts of the plant were assessed for their bioactive properties. The antioxidant activity was evaluated by means of the free radicals scavenging activity, reducing power and inhibition of lipid peroxidation. The cytotoxicity of the different extracts was assessed in vitro against several human cancer cell lines (breast, lung, cervical and hepatocellular carcinomas) and, additionally, their hepatotoxicity was evaluated using a porcine liver primary cell culture. G. molle was shown to be rich in carbohydrates and proteins, providing tocopherols and essential fatty acids. Amongst the various extracts, the acetone extract was found to have the highest content of phenolic compounds (mainly ellagitannins, but also some flavone and flavonol glycosides) as well as the highest antioxidant and cytotoxic activities. To the best of our knowledge, this is the first report on the chemical composition and bioactive properties of G. molle.

Allergy-Friendly Gardening

MedlinePlus

... gardening may also help reduce symptoms. Certain flowers, trees and grasses are better suited for the gardens ... people with outdoor allergies. These include: • Cactus • Cherry tree • Dahlia • Daisy • Geranium • Hibiscus • Iris • Magnolia • Roses • Snapdragon • ...

Phytosociological study of the dwarf shrub heath of Simeonof Wilderness, Shumagin Islands, Southwestern Alaska

USGS Publications Warehouse

Daniels, F.J.A.; Talbot, S. S.; Looman, Talbot S.; Schofield, W.B.

2004-01-01

The maritime dwarf shrub heath vegetation of the Northern Pacific, Simeonof Island, Shumagin Islands, Southwestern Alaska, was studied according to the Braun-Blanquet approach. Based on 30 releve??s of 16 m2 that include vascular plants, bryophytes, and lichens, two new associations could be described belonging to the class Loiseleurio-Vaccinietea (order Rhododendro-Vaccinietalia): Rubo-Empetretum nigri and Carici-Empetretum nigri. The wind-sheltered Rubo-Empetretum nigri (alliance Phyllodoco-Vaccinion) mainly occurs in the lowlands on level terrain or sloping sites at lower foot slopes of mountains on deeper, mesic soil; this association is the zonal vegetation of the lowlands. Boreal, widespread and amphi-Beringian species are prominent in the distribution-type spectrum of the vascular plants. Two variants of Rubo-Empetretum nigri are described. A Geranium erianthum variant occurs on south-facing slopes and is rich in vascular plants species. A Plagiothecium undulatum variant is restricted to northern exposures and is rich in bryophytes and lichens. A Carici-Empetretum nigri (alliance Loiseleurio-Diapension) occurs on shallow soil on wind exposed sites at higher elevations in the mountains. It is very rich in lichen species of arctic-alpine distribution. Canonical correspondence analysis (CCA) suggests that altitude, nutrient content of the soil and exposition are the most important differential ecological factors. Soil depth, total carbon and nitrogen content, plant available phosphorus and all other measured cation contents are higher in Rubo-Empetretum than in Carici-Empetretum. Literature comparisons confirm the occurrence of both associations in other areas on the Southwest Alaska Peninsula and Aleutian Islands. Presumably both associations have an amphi-Beringian distribution. The syntaxonomy of boreal-montane dwarf shrub heaths and synecological aspects are briefly discussed. ?? 2004 Gebru??der Borntraeger.

Foliar biofilms of Burkholderia pyrrocinia FP62 on geraniums

USDA-ARS?s Scientific Manuscript database

Biofilm formation on foliar surfaces is commonly associated with plants in water-saturated environments (e.g. tropics or modified environments). On most leaf surfaces bacteria are thought to reside in aggregates with limited production of an exopolysaccharide (EPS) matrix. However, the biocontrol ag...

Graded Index Silicon Geranium on Lattice Matched Silicon Geranium Semiconductor Alloy

NASA Technical Reports Server (NTRS)

Park, Yeonjoon (Inventor); Choi, Sang H. (Inventor); King, Glen C. (Inventor); Elliott, James R., Jr. (Inventor); Stoakley, Diane M. (Inventor)

2009-01-01

A lattice matched silicon germanium (SiGe) semiconductive alloy is formed when a {111} crystal plane of a cubic diamond structure SiGe is grown on the {0001} C-plane of a single crystalline Al2O3 substrate such that a <110> orientation of the cubic diamond structure SiGe is aligned with a <1,0,-1,0> orientation of the {0001} C-plane. A lattice match between the substrate and the SiGe is achieved by using a SiGe composition that is 0.7223 atomic percent silicon and 0.2777 atomic percent germanium. A layer of Si(1-x), ,Ge(x) is formed on the cubic diamond structure SiGe. The value of X (i) defines an atomic percent of germanium satisfying 0.2277

Hydrolyzable Tannins, Flavonol Glycosides, and Phenolic Acids Show Seasonal and Ontogenic Variation in Geranium sylvaticum.

PubMed

Tuominen, Anu; Salminen, Juha-Pekka

2017-08-09

The seasonal variation of polyphenols in the aboveground organs and roots of Geranium sylvaticum in four populations was studied using UPLC-DAD-ESI-QqQ-MS/MS. The content of the main compound, geraniin, was highest (16% of dry weight) in the basal leaves after the flowering period but stayed rather constant throughout the growing season. Compound-specific mass spectrometric methods revealed the different seasonal patterns in minor polyphenols. Maximum contents of galloylglucoses and flavonol glycosides were detected in the small leaves in May, whereas the contents of further modified ellagitannins, such as ascorgeraniin and chebulagic acid, increased during the growing season. In flower organs, the polyphenol contents differed significantly between ontogenic phases so that maximum amounts were typically found in the bud phase, except in pistils the amount of gallotannins increased significantly in the fruit phase. These results can be used in evaluating the role of polyphenols in plant-herbivore interactions or in planning the best collection times of G. sylvaticum for compound isolation purposes.

Chemical characterization and bioactive properties of aqueous and organic extracts of Geranium robertianum L.

PubMed

Graça, V C; Barros, Lillian; Calhelha, Ricardo C; Dias, Maria Inês; Carvalho, Ana Maria; Santos-Buelga, Celestino; Santos, P F; Ferreira, Isabel C F R

2016-09-14

Geranium robertianum L. has been used in folk medicine and herbalism practice for the treatment of various conditions, but the study of its bioactivity has been barely addressed. Although its phytochemical composition has received some attention, contributions to the nutritional composition are practically unknown. Herein, G. robertianum gathered in Trás-os-Montes, Northeastern Portugal, was chemically characterized regarding nutritional parameters, and the antioxidant activity and cytotoxicity against several human tumor cell lines and non-tumor porcine liver primary cells of several aqueous and organic extracts were evaluated. G. robertianum showed to be an equilibrated valuable herb, rich in carbohydrates and proteins, and poor in fat, providing sugars, tocopherols, organic and essential fatty acids. Amongst the extracts, the acetone one showed the highest total phenol and total flavonoid contents, as well as the greatest antioxidant and cytotoxic activities. This extract showed to contain hydrolysable tannins (e.g. geraniin and castalagin/vescalagin), as the main phenolic compounds.

Bioactivity-Guided Investigation of Geranium Essential Oils as Natural Tick Repellents

DTIC Science & Technology

2013-03-25

irritant contact dermatitis ).12 Over 62% of 1500 soldiers who responded to a questionnaire urged the Army to obtain a better repellent.13 As a result of...Bartholomay, L.; Coats, J. Quantitative structure−activity relationship of botanical sesquiter- penes: Spatial and contact repellency to the yellow

Spring Flowers: Harvest of a Sensitive Eye

ERIC Educational Resources Information Center

Clark, Eloise; Levin, Ted

1978-01-01

Defining and describing a number of spring flowers, this article includes illustrations and explanations that demonstrate "art and science are born of the same parents". The flowers discussed are skunk cabbage, bellwort, spring beauty, jack-in-the-pulpit, Solomon's seal, wild geranium, showy orchids, moccasin flower, bluets, apple, and Indian…

[Herbal medicines against respiratory diseases--traditional empiricism or pharmacological evidence?].

PubMed

2014-11-01

Sinusitis and bronchitis belong to the most frequent respiratory infections. The relevant guidelines mention the therapy with herbal substances and assign a good activity to cineole and Myrtol as well as to combination preparations with cowslip. There is no final statement of the guidelines' authors concerning the extract of Pelargonium sidoides. Further studies will be necessary to give reliable therapeutic recommendations.

Pollen (quick guide)

USDA-ARS?s Scientific Manuscript database

What is pollen, and is it haploid or diploid? Pollen is a crucial stage of the plant life cycle — without pollen there will be no seed. When someone says “Think of a plant,” the plant you think of (whether it’s a tree, a tomato plant, or a geranium) is a sporophyte. Most land plants are sporophytes...

Effects of essential oil exposure on salivary estrogen concentration in perimenopausal women.

PubMed

Shinohara, Kazuyuki; Doi, Hirokazu; Kumagai, Chizu; Sawano, Erika; Tarumi, Wataru

2017-01-01

The menopausal transition is the time from the onset of menstrual changes until one year after the final menstrual period. During this phase, perimenopausal women experience a variety of health-related symptoms, which seemingly derive from declining level of estrogen secretion. It has long been recognized that some essential oils have the efficacy of alleviating menopausal symptoms. On the basis of this, it is possible that these essential oils have the potency to facilitate estrogen secretion in women. The present study investigated this possibility by examining if the olfactory exposure to the essential oil increase salivary estrogen concentration. We tested the effect of ten essential oils; clary sage, frankincense, geranium, lavender, jasmine absolute, neroli, rose otto, ylang ylang, orange and roman chamomile, which are thought to relieve perimenopasal symptoms. The results have shown increase of salivary estrogen concentration induced by exposure to geranium and rose otto compared to control odor. Together with the previous studies, the present study may give support to the notion that olfactory exposure to some essential oils can influence salivary concentration of estrogen.

[The in vitro action of plants on Vibrio cholerae].

PubMed

Guevara, J M; Chumpitaz, J; Valencia, E

1994-01-01

Natural products of several plants, according to the geographic location, are used by Peruvian people in the popular treatment of diarrhea, with good success. When cholerae cases appeared in Peru, we were interested to know the "in vitro" effect against Vibrio cholerae 01, of these useful plants to treat diarrhea. The following plants were tested: Cichorium intybus, Althaea officinalis, Psorela glandulosa, Geranium maculatum, Punica granatum, Malus sativa, Cydonia oblonga, Chenopodium ambrosoides, Krameria triandria, Tea chinensis, Daucus carota, Persea gratissima, Psidium guayaba and Lippia dulcis. Decoction or infusion of the plants were used in the "in vitro" experiments. The following plants showed no "in vitro" effect against V. cholerae: Cichorium intybus, Althaea officinalis, Psorela glandulosa, Geranium maculatum, Chenopodium ambrosoides, Krameria triandria, Psidium guayaba, Lippia dulcis and Daucus carota. Decoction of Malus sativa and Cydenia oblonga showed bactericidal effect for their acidity and stone avocado (Persea gratissima) a late bactericidal effect. Tea infusión and the decoction of Punica granatum peel, showed the best bactericidal effect and we suggest to use them as to stop cholera spreading.

Separation and purification of hydrolyzable tannin from Geranium wilfordii Maxim by reversed-phase and normal-phase high-speed counter-current chromatography.

PubMed

Liu, Dan; Su, Zhiguo; Wang, Changhai; Gu, Ming; Xing, Siliang

2010-08-01

Three hydrolyzable tannins, geraniin, corilagin and gallic acid, main active components of Geranium wilfordii Maxim, have been separated and purified in one-step by both reversed-phase and normal-phase high-speed counter-current chromatography. Gallic acid, corilagin and geraniin were purified from 70% aqueous acetone extract of G. wilfordii Maxim with solvent system n-hexane-ethyl acetate-methanol-acetic acid-water (1:10:0.2:0.2:20) by reversed-phase high-speed counter-current chromatography at purities of 94.2, 91.0 and 91.3%, at yields of 89.3, 82.9 and 91.7%, respectively. Gallic acid, corilagin and geraniin were purified with solvent system n-hexane-ethyl acetate-methanol-acetic acid-water (0.2:10:2:1:5) by normal-phase high-speed counter-current chromatography at purities of 85.9, 92.2 and 87.6%, at yields of 87.4, 94.6 and 94.3%, respectively. It was successful for both reversed-phase and normal-phase high-speed counter-current chromatography to separate high-polarity of low-molecular-weight substances.

Inhibitory effects of citronellol and geraniol on nitric oxide and prostaglandin E₂production in macrophages.

PubMed

Su, Yu-Wen; Chao, Shiou-Huei; Lee, Meng-Hwan; Ou, Tsang-Yow; Tsai, Ying-Chieh

2010-10-01

Geranium oil has been used traditionally for diarrhea, dermatitis, and intestinal inflammation in East Asia. The aim of this study was to determine the effects of geranium oil's characteristic components, citronellol and geraniol, on lipopolysaccharide (LPS)-induced nitric oxide (NO) and prostaglandin E(2) (PGE(2)) production in RAW 264.7 macrophages. Citronellol and geraniol suppressed NO and PGE(2) production in a dose-dependent manner. The inhibitory efficacy of geraniol was concomitant with decreases in protein and mRNA expression levels of inducible nitric oxide synthase (iNOS), whereas citronellol inhibited only iNOS enzymatic activity. By adding citronellol and geraniol, the LPS-induced cyclooxygenase-2 (COX-2) protein and mRNA expression levels were significantly attenuated, whereas cytosolic degradation of I κB α and upregulation of NF-κB p65 in the nucleus were reversed. These results suggested that citronellol and geraniol exhibit anti-inflammatory activities, supporting their common use and demonstrating their therapeutic potential for inflammation-associated disorders. © Georg Thieme Verlag KG Stuttgart · New York.

78 FR 7738 - Notice of Request for Revision to and Extension of Approval of an Information Collection...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-02-04

...In accordance with the Paperwork Reduction Act of 1995, this notice announces the Animal and Plant Health Inspection Service's intention to request a revision to and extension of approval of an information collection associated with the regulations for a certification program for imported articles of Pelargonium spp. and Solanum spp. to prevent the introduction of potato brown rot into the United States.

Antibacterial activity and composition of essential oils from Pelargonium graveolens L'Her and Vitex agnus-castus L.

PubMed

Ghannadi, A; Bagherinejad, Mr; Abedi, D; Jalali, M; Absalan, B; Sadeghi, N

2012-12-01

Essential oils are volatile compounds that have been used since Middle Ages as antimicrobial, anti-inflammatory, sedative, local anesthetic and food flavoring agents. In the current study, essential oils of Pelargonium graveolens L'Her and Vitex agnus-castus L. were analyzed for their antibacterial activities. The chemical compositions of essential oils were characterized by GC-MS. Disc diffusion method was used to study antimicrobial activity. Inhibition zones showed that the essential oils of the two plants were active against all of the studied bacteria (except Listeria monocytogenes). The susceptibility of the strains changed with the dilution of essential oils in DMSO. The pure essential oils showed the most extensive inhibition zones and they were very effective antimicrobial compounds compared to chloramphenicol and amoxicillin. The most susceptible strain against these two essential oils was Staphylococcus aureus. It seems that β-citronellol is a prominent part of P. graveolens volatile oil and caryophyllene oxide is a famous and important part of V. agnus-castus volatile oil and their probable synergistic effect with other constituents are responsible for the antibacterial effects of these oils. However further studies must be performed to confirm the safety of these oils for use as antimicrobial agents and natural preservatives in different products.

Microbe-based technology ameliorates glandular trichomes, secondary metabolites and antioxidants in Pelargonium graveolens L'Hér.

PubMed

Gupta, Rupali; Singh, Akanksha; Pandey, Rakesh

2016-09-01

Despite the vast exploration of microbes for plant health, there is a lack of knowledge about the synergistic effects of specific microorganisms in sustainable agriculture, especially in medicinal plants such as Pelargonium graveolens L'Hér. The aim of this study was to evaluate how synergistic microbes Trichoderma harzianum ThU, Glomus intraradices and Bacillus subtilis CIM affected crop productivity, secondary metabolites and glandular trichome number in P. graveolens. The results demonstrated a significant (P < 0.05) increase in plant growth, secondary metabolites, total chlorophyll, carotenoids, carbohydrates, total phenolics, total flavonoids, free radical-scavenging activity and total antioxidant capacity of P. graveolens treated with synergistic bioinoculants as compared with the control. Most interestingly, an increase in essential oil by 32% in the treatment with all three microbes was observed. Furthermore, the principal aroma compounds citronellol and geraniol also increased in the same treatment. A positive and direct correlation was observed between essential oil content and number of glandular trichomes in all treatments. The present study highlights an explicit amalgamation of prospective microbes showing potential for synergism that act as biostimulants in enhancing plant production and improving the antioxidant and aroma profile of P. graveolens. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

Nectar Sugar Production across Floral Phases in the Gynodioecious Protandrous Plant Geranium sylvaticum

PubMed Central

Varga, Sandra; Nuortila, Carolin; Kytöviita, Minna-Maarit

2013-01-01

Many zoophilous plants attract their pollinators by offering nectar as a reward. In gynodioecious plants (i.e. populations are composed of female and hermaphrodite individuals) nectar production has been repeatedly reported to be larger in hermaphrodite compared to female flowers even though nectar production across the different floral phases in dichogamous plants (i.e. plants with time separation of pollen dispersal and stigma receptivity) has rarely been examined. In this study, sugar production in nectar standing crop and secretion rate were investigated in Geranium sylvaticum, a gynodioecious plant species with protandry (i.e. with hermaphrodite flowers releasing their pollen before the stigma is receptive). We found that flowers from hermaphrodites produced more nectar than female flowers in terms of total nectar sugar content. In addition, differences in nectar production among floral phases were found in hermaphrodite flowers but not in female flowers. In hermaphrodite flowers, maximum sugar content coincided with pollen presentation and declined slightly towards the female phase, indicating nectar reabsorption, whereas in female flowers sugar content did not differ between the floral phases. These differences in floral reward are discussed in relation to visitation patterns by pollinators and seed production in this species. PMID:23614053

Nectar sugar production across floral phases in the Gynodioecious Protandrous Plant Geranium sylvaticum [corrected].

PubMed

Varga, Sandra; Nuortila, Carolin; Kytöviita, Minna-Maarit

2013-01-01

Many zoophilous plants attract their pollinators by offering nectar as a reward. In gynodioecious plants (i.e. populations are composed of female and hermaphrodite individuals) nectar production has been repeatedly reported to be larger in hermaphrodite compared to female flowers even though nectar production across the different floral phases in dichogamous plants (i.e. plants with time separation of pollen dispersal and stigma receptivity) has rarely been examined. In this study, sugar production in nectar standing crop and secretion rate were investigated in Geranium sylvaticum, a gynodioecious plant species with protandry (i.e. with hermaphrodite flowers releasing their pollen before the stigma is receptive). We found that flowers from hermaphrodites produced more nectar than female flowers in terms of total nectar sugar content. In addition, differences in nectar production among floral phases were found in hermaphrodite flowers but not in female flowers. In hermaphrodite flowers, maximum sugar content coincided with pollen presentation and declined slightly towards the female phase, indicating nectar reabsorption, whereas in female flowers sugar content did not differ between the floral phases. These differences in floral reward are discussed in relation to visitation patterns by pollinators and seed production in this species.

On the Variation of Zonal Gravity Coefficients of a Giant Planet Caused by Its Deep Zonal Flows

NASA Astrophysics Data System (ADS)

Kong, Dali; Zhang, Keke; Schubert, Gerald

2012-04-01

Rapidly rotating giant planets are usually marked by the existence of strong zonal flows at the cloud level. If the zonal flow is sufficiently deep and strong, it can produce hydrostatic-related gravitational anomalies through distortion of the planet's shape. This paper determines the zonal gravity coefficients, J 2n , n = 1, 2, 3, ..., via an analytical method taking into account rotation-induced shape changes by assuming that a planet has an effective uniform density and that the zonal flows arise from deep convection and extend along cylinders parallel to the rotation axis. Two different but related hydrostatic models are considered. When a giant planet is in rigid-body rotation, the exact solution of the problem using oblate spheroidal coordinates is derived, allowing us to compute the value of its zonal gravity coefficients \\bar{J}_{2n}, n=1,2,3, \\dots, without making any approximation. When the deep zonal flow is sufficiently strong, we develop a general perturbation theory for estimating the variation of the zonal gravity coefficients, \\Delta {J}_{2n}={J}_{2n}-\\bar{J}_{2n}, n=1,2,3, \\dots, caused by the effect of the deep zonal flows for an arbitrarily rapidly rotating planet. Applying the general theory to Jupiter, we find that the deep zonal flow could contribute up to 0.3% of the J 2 coefficient and 0.7% of J 4. It is also found that the shape-driven harmonics at the 10th zonal gravity coefficient become dominant, i.e., \\Delta {J}_{2n} \\,{\\ge}\\, \\bar{J}_{2n} for n >= 5.

Identification of anti-inflammatory fractions of Geranium wilfordii using tumor necrosis factor-alpha as a drug target on Herbochip® - an array-based high throughput screening platform.

PubMed

Huang, Min; Yao, Pei-Wun; Chang, Margaret Dah-Tysr; Ng, Sim-Kun; Yu, Chien-Hui; Zhang, Yun-Feng; Wen, Meng-Liang; Yang, Xiao-Yuan; Lai, Yiu-Kay

2015-05-12

Geranium wilfordii is one of the major species used as Herba Geranii (lao-guan-cao) in China, it is commonly used solely or in polyherbal formulations for treatment of joint pain resulted from rheumatoid arthritis (RA) and gout. This herb is used to validate a target-based drug screening platform called Herbochip® and evaluate anti-inflammatory effects of Geranium wilfordii ethanolic extract (GWE) using tumor necrosis factor-alpha (TNF-α) as a drug target together with subsequent in vitro and in vivo assays. A microarray-based drug screening platform was constructed by arraying HPLC fractions of herbal extracts onto a surface-activated polystyrene slide (Herbochip®). Using TNF-α as a molecular probe, fractions of 82 selected herbal extracts, including GWE, were then screened to identify plant extracts containing TNF-α-binding agents. Cytotoxicity of GWE and modulatory effects of GWE on TNF-α expression were evaluated by cell-based assays using TNF-α sensitive murine fibrosarcoma L929 cells as an in vitro model. The in vivo anti-inflammatory effects of GWE were further assessed by animal models including carrageenan-induced hind paw edema in rats and xylene-induced ear edema in mice, in comparison with aspirin. The hybridization data obtained by Herbochip® analysis showed unambiguous signals which confirmed TNF-α binding activity in 46 herbal extracts including GWE. In L929 cells GWE showed significant inhibitory effect on TNF-α expression with negligible cytotoxicity. GWE also significantly inhibited formation of carrageenan-induced hind paw edema and xylene-induced ear edema in animal models, indicating that it indeed possessed anti-inflammatory activity. We have thus validated effectiveness of the Herbochip® drug screening platform using TNF-α as a molecular target. Subsequent experiments on GWE lead us to conclude that the anti-RA activity of GWE can be attributed to inhibitory effect of GWE on the key inflammatory factor, TNF-α. Our results contribute towards validation of the traditional use of GWE in the treatment of RA and other inflammatory joint disorders.

Anti-Inflammatory Effect of Malva sylvestris, Sida cordifolia, and Pelargonium graveolens Is Related to Inhibition of Prostanoid Production.

PubMed

Martins, Cleverson Antonio Ferreira; Campos, Michel Leandro; Irioda, Ana Carolina; Stremel, Dile Pontarolo; Trindade, Angela Cristina Leal Badaró; Pontarolo, Roberto

2017-11-03

The ability of plant extracts and preparations to reduce inflammation has been proven by different means in experimental models. Since inflammation enhances the release of specific mediators, inhibition of their production can be used to investigate the anti-inflammatory effect of plants widely used in folk medicine for this purpose. The study was performed for leaves and flowers of Malva sylvestris , and leaves of Sida cordifolia and Pelargonium graveolens . These are three plant species known in Brazil as Malva. The anti-inflammatory activity of extracts and fractions (hexane, chloroform, ethyl acetate, and residual) was evaluated by quantitation of prostaglandins (PG) PGE₂, PGD₂, PGF 2α , and thromboxane B₂ (the stable nonenzymatic product of TXA₂) concentration in the supernatant of lipopolysaccharide (LPS)- induced RAW 264.7 cells. Inhibition of anti-inflammatory mediator release was observed for plants mainly in the crude extract, ethyl acetate fraction, and residual fraction. The results suggest superior activity of S. cordifolia , leading to significantly lower values of all mediators after treatment with its residual fraction, even at the lower concentration tested (10 μg/mL). M. sylvestris and P. graveolens showed similar results, such as the reduction of all mediators after treatment, with leaf crude extracts (50 μg/mL). These results suggest that the three species known as Malva have anti-inflammatory properties, S. cordifolia being the most potent.

The Wound Healing Effects of Herbal Cream Containing Oliveria Decumbens and Pelargonium Graveolens Essential Oils in Diabetic Foot Ulcer Model

PubMed Central

Mahboubi, Mohaddese; Taghizadeh, Mohsen; Khamechian, Tahereh; Tamtaji, Omid Reza; Mokhtari, Rasoul; Talaei, Sayyed Alireza

2018-01-01

BACKGROUND The number of diabetic patients in adult population is increasing. All this population are at risk of developing diabetic foot ulcers (DFUs) that are associated with unwanted ailments and high mortality. In spite of current therapies for DFUs, further therapies are needed to help the patients. METHODS The efficacy of herbal cream containing Pelargonium graveolens and Oliveria decombens essential oils was evaluated topically for treatment of DFUs in rat animal model in comparison with two other herbal formulas containing each essential oil alone, placebo (the basic formula without active ingredients) and normal saline as control groups. After anesthesia of diabetic rats (n=75) induced by streptozotocin (STZ), diabetic wounds were visible on the hind dorsal surface of the foot. The treatments were initiated on Day 1 and repeated 3 times a day for thirteen consecutive days. On day 1, 3, 5, 8 and 13, the wound sizes were determined and assessed histologically. RESULTS Three herbal formulations reduced the size of wounds in rats with DFUs, while the cream containing combined herbals of O. decumbens and P. graveolens essential oils had the highest tissue repair in DFU rat models. CONCLUSION Due to better wound healing effects of combined herbal cream containing O. decumbens and P. graveolens essential oils, it can be recommended in treatment of DFUs. PMID:29651391

The Wound Healing Effects of Herbal Cream Containing Oliveria Decumbens and Pelargonium Graveolens Essential Oils in Diabetic Foot Ulcer Model.

PubMed

Mahboubi, Mohaddese; Taghizadeh, Mohsen; Khamechian, Tahereh; Tamtaji, Omid Reza; Mokhtari, Rasoul; Talaei, Sayyed Alireza

2018-01-01

The number of diabetic patients in adult population is increasing. All this population are at risk of developing diabetic foot ulcers (DFUs) that are associated with unwanted ailments and high mortality. In spite of current therapies for DFUs, further therapies are needed to help the patients. The efficacy of herbal cream containing Pelargonium graveolens and Oliveria decombens essential oils was evaluated topically for treatment of DFUs in rat animal model in comparison with two other herbal formulas containing each essential oil alone, placebo (the basic formula without active ingredients) and normal saline as control groups. After anesthesia of diabetic rats (n=75) induced by streptozotocin (STZ), diabetic wounds were visible on the hind dorsal surface of the foot . The treatments were initiated on Day 1 and repeated 3 times a day for thirteen consecutive days. On day 1, 3, 5, 8 and 13, the wound sizes were determined and assessed histologically. Three herbal formulations reduced the size of wounds in rats with DFUs, while the cream containing combined herbals of O. decumbens and P. graveolens essential oils had the highest tissue repair in DFU rat models. Due to better wound healing effects of combined herbal cream containing O. decumbens and P. graveolens essential oils, it can be recommended in treatment of DFUs.

Antibacterial activity and composition of essential oils from Pelargonium graveolens L'Her and Vitex agnus-castus L

PubMed Central

Ghannadi, A; Bagherinejad, MR; Abedi, D; Jalali, M; Absalan, B; Sadeghi, N

2012-01-01

Background and Objectives Essential oils are volatile compounds that have been used since Middle Ages as antimicrobial, anti-inflammatory, sedative, local anesthetic and food flavoring agents. In the current study, essential oils of Pelargonium graveolens L'Her and Vitex agnus-castus L. were analyzed for their antibacterial activities. Materials and Methods The chemical compositions of essential oils were characterized by GC-MS. Disc diffusion method was used to study antimicrobial activity. Results and Conclusion Inhibition zones showed that the essential oils of the two plants were active against all of the studied bacteria (except Listeria monocytogenes). The susceptibility of the strains changed with the dilution of essential oils in DMSO. The pure essential oils showed the most extensive inhibition zones and they were very effective antimicrobial compounds compared to chloramphenicol and amoxicillin. The most susceptible strain against these two essential oils was Staphylococcus aureus. It seems that β-citronellol is a prominent part of P. graveolens volatile oil and caryophyllene oxide is a famous and important part of V. agnus-castus volatile oil and their probable synergistic effect with other constituents are responsible for the antibacterial effects of these oils. However further studies must be performed to confirm the safety of these oils for use as antimicrobial agents and natural preservatives in different products. PMID:23205247

Reconstruction of the ancestral plastid genome in Geraniaceae reveals a correlation between genome rearrangements, repeats, and nucleotide substitution rates.

PubMed

Weng, Mao-Lun; Blazier, John C; Govindu, Madhumita; Jansen, Robert K

2014-03-01

Geraniaceae plastid genomes are highly rearranged, and each of the four genera already sequenced in the family has a distinct genome organization. This study reports plastid genome sequences of six additional species, Francoa sonchifolia, Melianthus villosus, and Viviania marifolia from Geraniales, and Pelargonium alternans, California macrophylla, and Hypseocharis bilobata from Geraniaceae. These genome sequences, combined with previously published species, provide sufficient taxon sampling to reconstruct the ancestral plastid genome organization of Geraniaceae and the rearrangements unique to each genus. The ancestral plastid genome of Geraniaceae has a 4 kb inversion and a reduced, Pelargonium-like small single copy region. Our ancestral genome reconstruction suggests that a few minor rearrangements occurred in the stem branch of Geraniaceae followed by independent rearrangements in each genus. The genomic comparison demonstrates that a series of inverted repeat boundary shifts and inversions played a major role in shaping genome organization in the family. The distribution of repeats is strongly associated with breakpoints in the rearranged genomes, and the proportion and the number of large repeats (>20 bp and >60 bp) are significantly correlated with the degree of genome rearrangements. Increases in the degree of plastid genome rearrangements are correlated with the acceleration in nonsynonymous substitution rates (dN) but not with synonymous substitution rates (dS). Possible mechanisms that might contribute to this correlation, including DNA repair system and selection, are discussed.

Rossby waves and two-dimensional turbulence in a large-scale zonal jet

NASA Technical Reports Server (NTRS)

Shepherd, Theodor G.

1987-01-01

Homogeneous barotropic beta-plane turbulence is investigated, taking into account the effects of spatial inhomogeneity in the form of a zonal shear flows. Attention is given to the case of zonal flows that are barotropically stable and of larger scale than the resulting transient eddy field. Numerical simulations reveal that large-scale zonal flows alter the picture of classical beta-plane turbulence. It is found that the disturbance field penetrates to the largest scales of motion, that the larger disturbance scales show a tendency to meridional rather than zonal anisotropy, and that the initial spectral transfer rate away from an isotropic intermediate-scale source is enhanced by the shear-induced transfer associated with straining by the zonal flow.

Ozone and infection of geranium flowers by Botrytis cinerea

DOE Office of Scientific and Technical Information (OSTI.GOV)

Manning, W.J.; Feder, W.A.; Perkins, I.

1970-01-01

Flowering plants of geranium cultivars were exposed to 0.2, 0.35, and 0.55 ppm ozone for 4-hr periods at 20/sup 0/C in a greenhouse fumigation chamber. Three fully-opened flower heads were sprayed with a spore suspension of Botrytis cinerea at 2000, 1000, or 500 spores/ml immediately before exposure to ozone began. Sterile distilled water was sprayed on noninoculated flower heads. All flowers were examined for evidence of infection 24 hr after the end of the ozone-exposure periods. All flower heads were then removed and placed in wet, loosely tied plastic bags and incubated at 20/sup 0/C for 72 hr, with examinationmore » at 24-hr intervals for evidence of infection. Ozone at 0.2 ppm did not injure the plants or prevent or inhibit flower infection by B. cinerea at all inoculum levels. Natural infection also occurred on some noninoculated flowers. Ozone at 0.35 ppm did not injure the plants or prevent infection, but did inhibit pathogenesis at the 500-spore/ml inoculum level and on noninoculated flowers. Ozone at 0.55 ppm caused moderate injury on all plants. Ozone at this level did not prevent infection, but did restrict pathogenesis on all inoculated and noninoculated flowers.« less

Sylvatiins, acetylglucosylated hydrolysable tannins from the petals of Geranium sylvaticum show co-pigment effect.

PubMed

Tuominen, Anu; Sinkkonen, Jari; Karonen, Maarit; Salminen, Juha-Pekka

2015-07-01

Four hydrolysable tannins, named as sylvatiins A (1), B (2), C (3) and D (4), were isolated from the petals of Geranium sylvaticum. On the basis of spectrometric evidence of NMR analysis ((1)H NMR, (13)C NMR, DQF-COSY, TOCSY, NOESY, HSQC and HMBC), circular dichroism (CD) and ESI-MS/MS, sylvatiins A, B and C were characterized as galloyl glucoses containing one or two acetylglucoses attached to the 3-OH of the galloyl group, whereas sylvatiin D was found to have a chebulinic acid core containing acetylglucose attached in a similar way. The potential of these compounds to act as defensive compounds against herbivores was evaluated using the radial diffusion assay that measures the protein precipitation capacity. In addition, the capacity of sylvatiins to act as co-pigments with anthocyanins of G. sylvaticum petals was measured in vitro at different pH values. Sylvatiins A and D maintained efficiently the purple flower color near the natural pH of petal cells. The amount of sylvatiins was changed according to the flower color; deep purple petals with higher amount of anthocyanin contained more sylvatiins A and C than whiter petals. It was concluded that G. sylvaticum petal cells may accumulate sylvatiins for intermolecular co-pigmentation purposes. Copyright © 2015 Elsevier Ltd. All rights reserved.

Rose geranium essential oil as a source of new and safe anti-inflammatory drugs

PubMed Central

Boukhatem, Mohamed Nadjib; Kameli, Abdelkrim; Ferhat, Mohamed Amine; Saidi, Fairouz; Mekarnia, Maamar

2013-01-01

Background Since the available anti-inflammatory drugs exert an extensive variety of side effects, the search for new anti-inflammatory agents has been a priority of pharmaceutical industries. Aims The aim of the present study was to assess the anti-inflammatory activities of the essential oil of rose geranium (RGEO). Methods The chemical composition of the RGEO was investigated by gas chromatography. The major components were citronellol (29.13%), geraniol (12.62%), and citronellyl formate (8.06%). In the carrageenan-induced paw edema, five different groups were established and RGEO was administered orally in three different doses. Results RGEO (100 mg/kg) was able to significantly reduce the paw edema with a comparable effect to that observed with diclofenac, the positive control. In addition, RGEO showed a potent anti-inflammatory activity by topical treatment in the method of croton oil-induced ear edema. When the dose was 5 or 10 µl of RGEO per ear, the inflammation was reduced by 73 and 88%, respectively. This is the first report to demonstrate a significant anti-inflammatory activity of Algerian RGEO. In addition, histological analysis confirmed that RGEO inhibited the inflammatory responses in the skin. Conclusion Our results indicate that RGEO may have significant potential for the development of novel anti-inflammatory drugs with improved safety profile. PMID:24103319

Transport in zonal flows in analogous geophysical and plasma systems

NASA Astrophysics Data System (ADS)

del-Castillo-Negrete, Diego

1999-11-01

Zonal flows occur naturally in the oceans and the atmosphere of planets. Important examples include the zonal flows in Jupiter, the stratospheric polar jet in Antarctica, and oceanic jets like the Gulf Stream. These zonal flows create transport barriers that have a crucial influence on mixing and confinement (e.g. the ozone depletion in Antarctica). Zonal flows also give rise to long-lasting vortices (e.g. the Jupiter red spot) by shear instability. Because of this, the formation and stability of zonal flows and their role on transport have been problems of great interest in geophysical fluid dynamics. On the other hand, zonal flows have also been observed in fusion plasmas and their impact on the reduction of transport has been widely recognized. Based on the well-known analogy between Rossby waves in quasigeostrophic flows and drift waves in magnetically confined plasmas, I will discuss the relevance to fusion plasmas of models and experiments recently developed in geophysical fluid dynamics. Also, the potential application of plasma physics ideas to geophysical flows will be discussed. The role of shear in the suppression of transport and the effect of zonal flows on the statistics of transport will be studied using simplified models. It will be shown how zonal flows induce large particle displacements that can be characterized as Lévy flights, and that the trapping effect of vortices combined with the zonal flows gives rise to anomalous diffusion and Lévy (non-Gaussian) statistics. The models will be compared with laboratory experiments and with atmospheric and oceanographic qualitative observations.

The inhibition of Candida species by selected essential oils and their synergism with amphotericin B.

PubMed

Rosato, Antonio; Vitali, Cesare; Gallo, Daniela; Balenzano, Luca; Mallamaci, Rosanna

2008-08-01

In this work we highlight a possible synergistic anti-Candida effect between Melaleuca alternifolia, Origanum vulgare and Pelargonium graveolens essential oils and the antifungal compound Amphotericin B. The antifungal activity was assessed using the agar dilution method in eleven Candida strains. The results obtained indicate the occurrence of a synergistic interaction between the essential oils under study and Amphotericin B. P. graveolens essential oil appeared to be the most effective, inhibiting all the Candida species evaluated by this study.

On the tertiary instability formalism of zonal flows in magnetized plasmas

NASA Astrophysics Data System (ADS)

Rath, F.; Peeters, A. G.; Buchholz, R.; Grosshauser, S. R.; Seiferling, F.; Weikl, A.

2018-05-01

This paper investigates the so-called tertiary instabilities driven by the zonal flow in gyro-kinetic tokamak core turbulence. The Kelvin Helmholtz instability is first considered within a 2D fluid model and a threshold in the zonal flow wave vector kZF>kZF,c for instability is found. This critical scale is related to the breaking of the rotational symmetry by flux-surfaces, which is incorporated into the modified adiabatic electron response. The stability of undamped Rosenbluth-Hinton zonal flows is then investigated in gyro-kinetic simulations. Absolute instability, in the sense that the threshold zonal flow amplitude tends towards zero, is found above a zonal flow wave vector kZF,cρi≈1.3 ( ρi is the ion thermal Larmor radius), which is comparable to the 2D fluid results. Large scale zonal flows with kZF

Saturn’s gravitational field induced by its equatorially antisymmetric zonal winds

NASA Astrophysics Data System (ADS)

Kong, Dali; Zhang, Keke; Schubert, Gerald; Anderson, John D.

2018-05-01

The cloud-level zonal winds of Saturn are marked by a substantial equatorially antisymmetric component with a speed of about 50ms‑1 which, if they are sufficiently deep, can produce measurable odd zonal gravitational coefficients ΔJ 2k+1, k = 1, 2, 3, 4. This study, based on solutions of the thermal-gravitational wind equation, provides a theoretical basis for interpreting the odd gravitational coefficients of Saturn in terms of its equatorially antisymmetric zonal flow. We adopt a Saturnian model comprising an ice-rock core, a metallic dynamo region and an outer molecular envelope. We use an equatorially antisymmetric zonal flow that is parameterized, confined in the molecular envelope and satisfies the solvability condition required for the thermal-gravitational wind equation. The structure and amplitude of the zonal flow at the cloud level are chosen to be consistent with observations of Saturn. We calculate the odd zonal gravitational coefficients ΔJ 2k+1, k = 1, 2, 3, 4 by regarding the depth of the equatorially antisymmetric winds as a parameter. It is found that ΔJ 3 is ‑4.197 × 10‑8 if the zonal winds extend about 13 000 km downward from the cloud tops while it is ‑0.765 × 10‑8 if the depth is about 4000 km. The depth/profile of the equatorially antisymmetric zonal winds can eventually be estimated when the high-precision measurements of the Cassini Grand Finale become available.

Turbulence, transport, and zonal flows in the Madison symmetric torus reversed-field pinch

NASA Astrophysics Data System (ADS)

Williams, Z. R.; Pueschel, M. J.; Terry, P. W.; Hauff, T.

2017-12-01

The robustness and the effect of zonal flows in trapped electron mode (TEM) turbulence and Ion Temperature Gradient (ITG) turbulence in the reversed-field pinch (RFP) are investigated from numerical solutions of the gyrokinetic equations with and without magnetic external perturbations introduced to model tearing modes. For simulations without external magnetic field perturbations, zonal flows produce a much larger reduction of transport for the density-gradient-driven TEM turbulence than they do for the ITG turbulence. Zonal flows are studied in detail to understand the nature of their strong excitation in the RFP and to gain insight into the key differences between the TEM- and ITG-driven regimes. The zonal flow residuals are significantly larger in the RFP than in tokamak geometry due to the low safety factor. Collisionality is seen to play a significant role in the TEM zonal flow regulation through the different responses of the linear growth rate and the size of the Dimits shift to collisionality, while affecting the ITG only minimally. A secondary instability analysis reveals that the TEM turbulence drives zonal flows at a rate that is twice that of the ITG turbulence. In addition to interfering with zonal flows, the magnetic perturbations are found to obviate an energy scaling relation for fast particles.

Zonal wavefront reconstruction in quadrilateral geometry for phase measuring deflectometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Huang, Lei; Xue, Junpeng; Gao, Bo

2017-06-14

There are wide applications for zonal reconstruction methods in slope-based metrology due to its good capability of reconstructing the local details on surface profile. It was noticed in the literature that large reconstruction errors occur when using zonal reconstruction methods designed for rectangular geometry to process slopes in a quadrilateral geometry, which is a more general geometry with phase measuring deflectometry. In this paper, we present a new idea for the zonal methods for quadrilateral geometry. Instead of employing the intermediate slopes to set up height-slope equations, we consider the height increment as a more general connector to establish themore » height-slope relations for least-squares regression. The classical zonal methods and interpolation-assisted zonal methods are compared with our proposal. Results of both simulation and experiment demonstrate the effectiveness of the proposed idea. In implementation, the modification on the classical zonal methods is addressed. Finally, the new methods preserve many good aspects of the classical ones, such as the ability to handle a large incomplete slope dataset in an arbitrary aperture, and the low computational complexity comparable with the classical zonal method. Of course, the accuracy of the new methods is much higher when integrating the slopes in quadrilateral geometry.« less

Dynamics of zonal flows in helical systems.

PubMed

Sugama, H; Watanabe, T-H

2005-03-25

A theory for describing collisionless long-time behavior of zonal flows in helical systems is presented and its validity is verified by gyrokinetic-Vlasov simulation. It is shown that, under the influence of particles trapped in helical ripples, the response of zonal flows to a given source becomes weaker for lower radial wave numbers and deeper helical ripples while a high-level zonal-flow response, which is not affected by helical-ripple-trapped particles, can be maintained for a longer time by reducing their bounce-averaged radial drift velocity. This implies a possibility that helical configurations optimized for reducing neoclassical ripple transport can simultaneously enhance zonal flows which lower anomalous transport.

FARMS: The Flexible Agricultural Robotics Manipulator

NASA Technical Reports Server (NTRS)

Gill, Paul S.

1991-01-01

A technology utilization project was established with the Marshall Space Flight Center and the University of Georgia to develop an Earth-based, robotic end effector to process live plant (geranium) material which will improve productivity and efficiency in agricultural systems such as commercial nurseries and greenhouse systems. The aim is to apply this technology to NASA's presence in space, including permanently manned space stations and manned planetary communities requiring large scale food production needs.

Changes in Jupiter's Zonal Wind Profile Preceding and During the Juno Mission

NASA Technical Reports Server (NTRS)

Tollefson, Joshua; Wong, Michael H.; de Pater, Imke; Simon, Amy A.; Orton, Glenn S.; Rogers, John H.; Atreya, Sushil K.; Cosentino, Richard G.; Januszewski, William; Morales-Juberias, Raul;

Effects of finite poloidal gyroradius, shaping, and collisions on the zonal flow residuala)

NASA Astrophysics Data System (ADS)

Xiao, Yong; Catto, Peter J.; Dorland, William

2007-05-01

Zonal flow helps reduce and regulate the turbulent transport level in tokamaks. Rosenbluth and Hinton have shown that zonal flow damps to a nonvanishing residual level in collisionless [M. Rosenbluth and F. Hinton, Phys. Rev. Lett. 80, 724 (1998)] and collisional [F. Hinton and M. Rosenbluth, Plasma Phys. Control. Fusion 41, A653 (1999)] banana regime plasmas. Recent zonal flow advances are summarized including the evaluation of the effects on the zonal flow residual by plasma cross-section shaping, shorter wavelengths including those less than an electron gyroradius, and arbitrary ion collisionality relative to the zonal low frequency. In addition to giving a brief summary of these new developments, the analytic results are compared with GS2 numerical simulations [M. Kotschenreuther, G. Rewoldt, and W. Tang, Comput. Phys. Commun. 88, 128 (1991)] to demonstrate their value as benchmarks for turbulence codes.

Strong Temporal Variation Over One Saturnian Year: From Voyager to Cassini

NASA Technical Reports Server (NTRS)

Li, Liming; Achterberg, Richard K.; Conrath, Barney J.; Gierasch, Peter J.; Smith, Mark A.; Simon-Miller, Amy A.; Nixon, Conor A.; Orton, Glenn S.; Flasar, F. Michael; Jiang, Xun;

Strong Temporal Variation Over One Saturnian Year: From Voyager to Cassini

PubMed Central

Li, Liming; Achterberg, Richard K.; Conrath, Barney J.; Gierasch, Peter J.; Smith, Mark A.; Simon-Miller, Amy A.; Nixon, Conor A.; Orton, Glenn S.; Flasar, F. Michael; Jiang, Xun; Baines, Kevin H.; Morales-Juberías, Raúl; Ingersoll, Andrew P.; Vasavada, Ashwin R.; Del Genio, Anthony D.; West, Robert A.; Ewald, Shawn P.

2013-01-01

Here we report the combined spacecraft observations of Saturn acquired over one Saturnian year (~29.5 Earth years), from the Voyager encounters (1980–81) to the new Cassini reconnaissance (2009–10). The combined observations reveal a strong temporal increase of tropic temperature (~10 Kelvins) around the tropopause of Saturn (i.e., 50 mbar), which is stronger than the seasonal variability (~a few Kelvins). We also provide the first estimate of the zonal winds at 750 mbar, which is close to the zonal winds at 2000 mbar. The quasi-consistency of zonal winds between these two levels provides observational support to a numerical suggestion inferring that the zonal winds at pressures greater than 500 mbar do not vary significantly with depth. Furthermore, the temporal variation of zonal winds decreases its magnitude with depth, implying that the relatively deep zonal winds are stable with time. PMID:23934437

The Role of Reversed Equatorial Zonal Transport in Terminating an ENSO Event

NASA Astrophysics Data System (ADS)

Chen, H. C.; Hu, Z. Z.; Huang, B.; Sui, C. H.

2016-02-01

In this study, we demonstrate that a sudden reversal of anomalous equatorial zonal current at the peaking ENSO phase triggers the rapid termination of an ENSO event. Throughout an ENSO cycle, the anomalous equatorial zonal current is strongly controlled by the concavity of the anomalous thermocline meridional structure near the equator. During the ENSO developing phase, the anomalous zonal current in the central and eastern Pacific generally enhances the ENSO growth through its zonal SST advection. In the mature phase of ENSO, however, the equatorial thermocline depth anomalies are reflected in the eastern Pacific and slowly propagate westward off the equator in both hemispheres. As a result, the concavity of the thermocline anomalies near the equator is reversed, i.e., the off-equatorial thermocline depth anomalies become higher than that on the equator for El Niño events and lower for La Niño events. This meridional change of thermocline structure reverses zonal transport rapidly in the central-to-eastern equatorial Pacific, which weakens the ENSO SST anomalies by reversed advection. More importantly, the reversed zonal mass transport weakens the existing zonal tilting of equatorial thermocline and suppresses the thermocline feedback. Both processes are concentrated in the eastern equatorial Pacific and can be effective on subseasonal time scales. These current reversal effects are built-in to the ENSO peak phase and independent of the zonal wind effect on thermocline slope. It functions as an oceanic control on ENSO evolution during both El Niño and La Niña events.

Excitation mechanism of non-migrating tides

NASA Astrophysics Data System (ADS)

Miyoshi, Yasunobu; Pancheva, Dora; Mukhtarov, Plamen; Jin, Hidekatsu; Fujiwara, Hitoshi; Shinagawa, Hiroyuki

2017-04-01

Using an atmosphere-ionosphere coupled model, the excitation source and temporal (seasonal and interannual) variations in non-migrating tides are investigated in this study. We first focus our attention on temporal variations in eastward moving diurnal tide with zonal wavenumber 3 (DE3), which is the largest of all the non-migrating tides in the mesosphere and lower thermosphere (MLT). Our simulation results indicate that upward propagation of the DE3 excited in the troposphere is sensitive to the zonal mean zonal wind in the stratosphere and mesosphere. The DE3 amplitude is enhanced in the region where the vertical shear of the zonal mean zonal wind is positive (westerly shear). Quasi-2-year variation in the DE3 amplitude in the MLT region is generated by quasi-2-year variation in the zonal mean zonal wind between 40 and 70 km, which is modulated by the stratospheric QBO. The excitation mechanisms of SW3 (westward moving semidiurnal tide with zonal wavenumber 3) and SW1 (westward moving semidiurnal tide with zonal wavenumber 1) are also investigated. During equinoxes, the SW3 and SW1 are excited by tropospheric heating (latent heat release and solar radiative heating) associated with cumulus convection in the tropics, and propagate upward into the MLT region. On the other hand, during solstices, SW3 and SW1 are generated in the winter stratosphere and mesosphere through the nonlinear interaction between the stationary planetary wave and migrating semidiurnal tide, and propagate upward to the lower thermosphere. The excitation sources of other non-migrating tides are also discussed.

Generation of zonal magnetic fields by low-frequency dispersive electromagnetic waves in a nonuniform dusty magnetoplasma.

PubMed

Shukla, P K

2004-04-01

It is shown that zonal magnetic fields can be parametrically excited by low-frequency dispersive driftlike compressional electromagnetic (DDCEM) modes in a nonuniform dusty magnetoplasma. For this purpose, we derive a pair of coupled equations which exhibits the nonlinear coupling between DDCEM modes and zonal magnetic fields. The coupled mode equations are Fourier analyzed to derive a nonlinear dispersion relation. The latter depicts that zonal magnetic fields are nonlinearly generated at the expense of the low-frequency DDCEM wave energy. The relevance of our investigation to the transfer of energy from short scale DDCEM waves to long scale zonal magnetic field structures in dark molecular clouds is discussed.

Chemical characterization (GC/MS and NMR Fingerprinting) and bioactivities of South-African Pelargonium capitatum (L.) L' Her. (Geraniaceae) essential oil.

PubMed

Guerrini, Alessandra; Rossi, Damiano; Paganetto, Guglielmo; Tognolini, Massimiliano; Muzzoli, Mariavittoria; Romagnoli, Carlo; Antognoni, Fabiana; Vertuani, Silvia; Medici, Alessandro; Bruni, Alessandro; Useli, Chiara; Tamburini, Elena; Bruni, Renato; Sacchetti, Gianni

2011-04-01

Chemical fingerprinting of commercial Pelargonium capitatum (Geraniaceae) essential oil samples of south African origin was performed by GC, GC/MS, and (13) C- and (1) H-NMR. Thirty-seven compounds were identified, among which citronellol (32.71%) and geraniol (19.58%) were the most abundant. NMR Spectra of characteristic chemicals were provided. Broad-spectrum bioactivity properties of the oil were evaluated and compared with those of commercial Thymus vulgaris essential oil with the aim to obtain a functional profile in terms of efficacy and safety. P. capitatum essential oil provides a good performance as antimicrobial, with particular efficacy against Candida albicans strains. Antifungal activity performed against dermatophyte and phytopathogen strains revealed the latter as more sensitive, while antibacterial activity was not remarkable against both Gram-positive and Gram-negative bacteria. P. capitatum oil provided a lower antioxidant activity (IC(50) ) than that expressed by thyme essential oil, both in the 1,1-diphenyl-2-picrylhydrazyl (DPPH) and β-carotene bleaching tests. Results in photochemiluminescence (PCL) assay were negligible. To test the safety aspects of P. capitatum essential oil, mutagenic and toxicity properties were assayed by Ames test, with and without metabolic activation. Possible efficacy of P. capitatum essential oil as mutagenic protective agent against NaN(3) , 2-nitrofluorene, and 2-aminoanthracene was also assayed, providing interesting and significant antigenotoxic properties. Copyright © 2011 Verlag Helvetica Chimica Acta AG, Zürich.

Investigation of the Antifungal Activity and Mode of Action of Thymus vulgaris, Citrus limonum, Pelargonium graveolens, Cinnamomum cassia, Ocimum basilicum, and Eugenia caryophyllus Essential Oils.

PubMed

Gucwa, Katarzyna; Milewski, Sławomir; Dymerski, Tomasz; Szweda, Piotr

2018-05-08

The antimicrobial activity of plant oils and extracts has been recognized for many years. In this study the activity of Thymus vulgaris , Citrus limonum , Pelargonium graveolens , Cinnamomum cassia , Ocimum basilicum , and Eugenia caryophyllus essential oils (EOs) distributed by Pollena Aroma (Nowy Dwór Mazowiecki, Poland) was investigated against a group of 183 clinical isolates of C. albicans and 76 isolates of C. glabrata . All of the oils exhibited both fungistatic and fungicidal activity toward C. albicans and C. glabrata isolates. The highest activity was observed for cinnamon oil, with MIC (Minimum Inhibitory Concentration) values in the range 0.002⁻0.125% ( v / v ). The MIC values of the rest of the oils were in the range 0.005% (or less) to 2.5% ( v / v ). In most cases MFC (Minimum Fungicidal Concentration) values were equal to MIC or twice as high. Additionally, we examined the mode of action of selected EOs. The effect on cell wall components could not be clearly proved. Three of the tested EOs (thyme, lemon, and clove) affected cell membranes. At the same time, thyme, cinnamon, and clove oil influenced potassium ion efflux, which was not seen in the case of lemon oil. All of the tested oils demonstrated the ability to inhibit the transition of yeast to mycelium form, but the effect was the lowest in the case of cinnamon oil.

Characteristics of Pelargonium radula as a mercury bioindicator for safety assessment of drinking water.

PubMed

Majid, N A; Phang, I C; Darnis, D S

2017-10-01

Identification of Pelargonium radula as bioindicator for mercury (Hg) detection confers a new hope for monitoring the safety of drinking water consumption. Hg, like other non-essential metals, inflicts the deterioration of biological functions in human and other creatures. In the present study, effects of Hg on the physiology and biochemical content of P. radula were undertaken to understand the occurrence of the morphological changes observed. Young leaves of P. radula were treated with different concentrations of Hg-containing solution (0.5, 1.0 and 2.0 ppb) along with controls for 4 h, prior to further analysis. Elevated Hg concentration in treatment solution significantly prompted an increased accumulation of Hg in the leaf tissues. Meanwhile, total protein, chlorophyll and low molecular mass thiol contents (cysteine, glutathione and oxidized glutathione) decreased as Hg accumulation increased. However, phytochelatin 2 productions were induced in the treated leaves, in comparison to the control. Based on these findings, it is postulated that as low as 0.5 ppb of Hg interferes with the metabolic processes of plant cells, which was reflected from the morphological changes exhibited on P. radula leaves-the colour of the Hg-treated leaves changed from green to yellowish-brown, became chlorosis and wilted. Changes in the tested characteristics of plant are closely related to the Hg-induced morphological changes on P. radula leaves, a potential bioindicator for detecting Hg in drinking water.

Evolution of the eastward shift in the quasi-stationary minimum of the Antarctic total ozone column

NASA Astrophysics Data System (ADS)

Grytsai, Asen; Klekociuk, Andrew; Milinevsky, Gennadi; Evtushevsky, Oleksandr; Stone, Kane

2017-02-01

The quasi-stationary pattern of the Antarctic total ozone has changed during the last 4 decades, showing an eastward shift in the zonal ozone minimum. In this work, the association between the longitudinal shift of the zonal ozone minimum and changes in meteorological fields in austral spring (September-November) for 1979-2014 is analyzed using ERA-Interim and NCEP-NCAR reanalyses. Regressive, correlative and anomaly composite analyses are applied to reanalysis data. Patterns of the Southern Annular Mode and quasi-stationary zonal waves 1 and 3 in the meteorological fields show relationships with interannual variability in the longitude of the zonal ozone minimum. On decadal timescales, consistent longitudinal shifts of the zonal ozone minimum and zonal wave 3 pattern in the middle-troposphere temperature at the southern midlatitudes are shown. Attribution runs of the chemistry-climate version of the Australian Community Climate and Earth System Simulator (ACCESS-CCM) model suggest that long-term shifts of the zonal ozone minimum are separately contributed by changes in ozone-depleting substances and greenhouse gases. As is known, Antarctic ozone depletion in spring is strongly projected on the Southern Annular Mode in summer and impacts summertime surface climate across the Southern Hemisphere. The results of this study suggest that changes in zonal ozone asymmetry accompanying ozone depletion could be associated with regional climate changes in the Southern Hemisphere in spring.

Model test of anchoring effect on zonal disintegration in deep surrounding rock masses.

PubMed

Chen, Xu-Guang; Zhang, Qiang-Yong; Wang, Yuan; Liu, De-Jun; Zhang, Ning

2013-01-01

The deep rock masses show a different mechanical behavior compared with the shallow rock masses. They are classified into alternating fractured and intact zones during the excavation, which is known as zonal disintegration. Such phenomenon is a great disaster and will induce the different excavation and anchoring methodology. In this study, a 3D geomechanics model test was conducted to research the anchoring effect of zonal disintegration. The model was constructed with anchoring in a half and nonanchoring in the other half, to compare with each other. The optical extensometer and optical sensor were adopted to measure the displacement and strain changing law in the model test. The displacement laws of the deep surrounding rocks were obtained and found to be nonmonotonic versus the distance to the periphery. Zonal disintegration occurs in the area without anchoring and did not occur in the model under anchoring condition. By contrasting the phenomenon, the anchor effect of restraining zonal disintegration was revealed. And the formation condition of zonal disintegration was decided. In the procedure of tunnel excavation, the anchor strain was found to be alternation in tension and compression. It indicates that anchor will show the nonmonotonic law during suppressing the zonal disintegration.

Model Test of Anchoring Effect on Zonal Disintegration in Deep Surrounding Rock Masses

PubMed Central

Chen, Xu-Guang; Zhang, Qiang-Yong; Wang, Yuan; Liu, De-Jun; Zhang, Ning

2013-01-01

The deep rock masses show a different mechanical behavior compared with the shallow rock masses. They are classified into alternating fractured and intact zones during the excavation, which is known as zonal disintegration. Such phenomenon is a great disaster and will induce the different excavation and anchoring methodology. In this study, a 3D geomechanics model test was conducted to research the anchoring effect of zonal disintegration. The model was constructed with anchoring in a half and nonanchoring in the other half, to compare with each other. The optical extensometer and optical sensor were adopted to measure the displacement and strain changing law in the model test. The displacement laws of the deep surrounding rocks were obtained and found to be nonmonotonic versus the distance to the periphery. Zonal disintegration occurs in the area without anchoring and did not occur in the model under anchoring condition. By contrasting the phenomenon, the anchor effect of restraining zonal disintegration was revealed. And the formation condition of zonal disintegration was decided. In the procedure of tunnel excavation, the anchor strain was found to be alternation in tension and compression. It indicates that anchor will show the nonmonotonic law during suppressing the zonal disintegration. PMID:23997683

Solar-QBO Interaction and Its Impact on Stratospheric Ozone in a Zonally Averaged Photochemical Transport Model of the Middle Atmosphere

DTIC Science & Technology

2007-08-28

Solar- QBO interaction and its impact on stratospheric ozone in a zonally averaged photochemical transport model of the middle atmosphere J. P...investigate the solar cycle modulation of the quasi-biennial oscillation ( QBO ) in stratospheric zonal winds and its impact on stratospheric ozone with an...updated version of the zonally averaged CHEM2D middle atmosphere model. We find that the duration of the westerly QBO phase at solar maximum is 3 months

Biophysical studies of interaction between hydrolysable tannins isolated from Oenothera gigas and Geranium sanguineum with human serum albumin.

PubMed

Sekowski, Szymon; Ionov, Maksim; Kaszuba, Mateusz; Mavlyanov, Saidmukhtar; Bryszewska, Maria; Zamaraeva, Maria

2014-11-01

Tannins, secondary plant metabolites, possess diverse biological activities and can interact with biopolymers such as lipids or proteins. Interactions between tannins and proteins depend on the structures of both and can result in changes in protein structure and activity. Because human serum albumin is the most abundant protein in plasma and responsible for interactions with important biological compounds (e.g. bilirubin) and proper blood pressure, therefore, it is very important to investigate reactions between HSA and tannins. This paper describes the interaction between human serum albumin (HSA) and two tannins: bihexahydroxydiphenoyl-trigalloylglucose (BDTG) and 1-O-galloyl-4,6-hexahydroxydiphenoyl-β-d-glucose (OGβDG), isolated from Geranium sanguineum and Oenothera gigas leafs, respectively. Optical (spectrofluorimetric) and chiral optical (circular dichroism) methods were used in this study. Fluorescence analysis demonstrated that OGβDG quenched HSA fluorescence more strongly than BDTG. Both OGβDG and BDTG formed complexes with albumin and caused a red shift of the fluorescence spectra but did not significantly change the protein secondary structure. Our studies clearly demonstrate that the tested tannins interact very strongly with human serum albumin (quenching constant K=88,277.26±407.04 M(-1) and K=55,552.67±583.07 M(-1) respectively for OGβDG and BDTG) in a manner depending on their chemical structure. Copyright © 2014 Elsevier B.V. All rights reserved.

Light availability affects sex lability in a gynodioecious plant.

PubMed

Varga, Sandra; Kytöviita, Minna-Maarit

2016-11-01

Sex lability (i.e., gender diphasy) in plants is classically linked to the larger resource needs associated with the female sexual function (i.e., seed production) compared to the male function (i.e., pollen production). Sex lability in response to the environment is extensively documented in dioecious species, but has been largely overlooked in gynodioecious plants. Here, we tested whether environmental conditions induce sex lability in the gynodioecious Geranium sylvaticum. We conducted a transplantation experiment in the field where plants with different sex expression were reciprocally transplanted between high light and low light habitats. We measured plants' reproductive output and sex expression over four years. Our results show that sex expression was labile over the study period. The light level at the destination habitat had a significant effect on sexual expression and reproductive output, because plants decreased their reproductive output when transplanted to the low light habitat. Transplantation origin did not affect any parameter measured. This study shows that sex expression in Geranium sylvaticum is labile and related to light availability. Sexually labile plants did not produce more seeds or pollen, and thus, there was no apparent fitness gain in sexually labile individuals. Sex lability in gynodioecious plants may be more common than previously believed because detection of sex lability necessitates data on the same individuals over time, which is rare in sexually dimorphic herbaceous plants. © 2016 Botanical Society of America.

Investigation of the dermal sensitization potential of various essential oils in the local lymph node assay.

PubMed

Lalko, J; Api, A M

2006-05-01

Essential oils are commonly used fragrance ingredients. The oils themselves are complex mixtures, which may contain naturally occurring contact sensitizers. The local lymph node assay was used to evaluate the dermal sensitization potential of basil, citronella, clove leaf, geranium, litsea cubeba, lemongrass, and palmarosa oils. Three of the major components--citral, eugenol, and geraniol--were included to investigate any difference in sensitization potential arising from their exposure in a mixture. Each fragrance material was tested at five concentration ranging from 2.5% to 50% w/v in 1:3 ethanol:diethyl phthalate. The stimulation index (SI) values were calculated for each dose level, an SI > or = 3 was considered a positive response. The estimated concentration (EC3) required to elicit a positive was calculated and taken as a measure of relative potency. The EC3 values and potency classification for basil, clove leaf, litsea cubeba, lemongrass and palmarosa oils were calculated to be <2.5% (> or = moderate), 7.1% (weak), 8.4% (weak), 6.5% (weak) and 9.6% (weak), respectively. Citronella and geranium oils were negative. The individual components citral, eugenol and geraniol resulted in EC3 values of 6.3%, 5.4% and 11.4%, respectively. In general, the potency of each essential oil did not differ significantly from that observed for its main individual component.

The latitude dependence of the variance of zonally averaged quantities. [in polar meteorology with attention to geometrical effects of earth

NASA Technical Reports Server (NTRS)

North, G. R.; Bell, T. L.; Cahalan, R. F.; Moeng, F. J.

1982-01-01

Geometric characteristics of the spherical earth are shown to be responsible for the increase of variance with latitude of zonally averaged meteorological statistics. An analytic model is constructed to display the effect of a spherical geometry on zonal averages, employing a sphere labeled with radial unit vectors in a real, stochastic field expanded in complex spherical harmonics. The variance of a zonally averaged field is found to be expressible in terms of the spectrum of the vector field of the spherical harmonics. A maximum variance is then located at the poles, and the ratio of the variance to the zonally averaged grid-point variance, weighted by the cosine of the latitude, yields the zonal correlation typical of the latitude. An example is provided for the 500 mb level in the Northern Hemisphere compared to 15 years of data. Variance is determined to increase north of 60 deg latitude.

Generation of zonal flows by electrostatic drift waves in electron-positron-ion plasmas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kaladze, T. D.; I. Vekua Institute of Applied Mathematics, Tbilisi State University, 2 University Str., 0186 Tbilisi; Shad, M.

2010-02-15

Generation of large-scale zonal flows by comparatively small-scale electrostatic drift waves in electron-positron-ion plasmas is considered. The generation mechanism is based on the parametric excitation of convective cells by finite amplitude drift waves having arbitrary wavelengths (as compared with the ion Larmor radius of plasma ions at the plasma electron temperature). Temperature inhomogeneity of electrons and positrons is taken into account assuming ions to be cold. To describe the generation of zonal flow generalized Hasegawa-Mima equation containing both vector and two scalar (of different nature) nonlinearities is used. A set of coupled equations describing the nonlinear interaction of drift wavesmore » and zonal flows is deduced. Explicit expressions for the maximum growth rate as well as for the optimal spatial dimensions of the zonal flows are obtained. Enriched possibilities of zonal flow generation with different growth rates are revealed. The present theory can be used for interpretations of drift wave observations in laboratory and astrophysical plasmas.« less

The role of zonal flows in disc gravito-turbulence

NASA Astrophysics Data System (ADS)

Vanon, R.

2018-07-01

The work presented here focuses on the role of zonal flows in the self-sustenance of gravito-turbulence in accretion discs. The numerical analysis is conducted using a bespoke pseudo-spectral code in fully compressible, non-linear conditions. The disc in question, which is modelled using the shearing sheet approximation, is assumed to be self-gravitating, viscous, and thermally diffusive; a constant cooling time-scale is also considered. Zonal flows are found to emerge at the onset of gravito-turbulence and they remain closely linked to the turbulent state. A cycle of zonal flow formation and destruction is established, mediated by a slow mode instability (which allows zonal flows to grow) and a non-axisymmetric instability (which disrupts the zonal flow), which is found to repeat numerous times. It is in fact the disruptive action of the non-axisymmetric instability to form new leading and trailing shearing waves, allowing energy to be extracted from the background flow and ensuring the self-sustenance of the gravito-turbulent regime.

The role of zonal flows in disc gravito-turbulence

NASA Astrophysics Data System (ADS)

Vanon, R.

2018-04-01

The work presented here focuses on the role of zonal flows in the self-sustenance of gravito-turbulence in accretion discs. The numerical analysis is conducted using a bespoke pseudo-spectral code in fully compressible, non-linear conditions. The disc in question, which is modelled using the shearing sheet approximation, is assumed to be self-gravitating, viscous, and thermally diffusive; a constant cooling timescale is also considered. Zonal flows are found to emerge at the onset of gravito-turbulence and they remain closely linked to the turbulent state. A cycle of zonal flow formation and destruction is established, mediated by a slow mode instability (which allows zonal flows to grow) and a non-axisymmetric instability (which disrupts the zonal flow), which is found to repeat numerous times. It is in fact the disruptive action of the non-axisymmetric instability to form new leading and trailing shearing waves, allowing energy to be extracted from the background flow and ensuring the self-sustenance of the gravito-turbulent regime.

Unusual behavior of quiet-time zonal and vertical plasma drift velocities over Jicamarca during the recent extended solar minimum of 2008

NASA Astrophysics Data System (ADS)

Santos, Ângela M.; Abdu, Mangalathayil A.; Souza, Jonas R.; Batista, Inez S.; Sobral, José H. A.

2017-11-01

The influence of the recent deep and prolonged solar minimum on the daytime zonal and vertical plasma drift velocities during quiet time is investigated in this work. Analyzing the data obtained from incoherent scatter radar from Jicamarca (11.95° S, 76.87° W) we observe an anomalous behavior of the zonal plasma drift during June 2008 characterized by lower than usual daytime westward drift and its early afternoon reversal to eastward. As a case study the zonal drift observed on 24 June 2008 is modeled using a realistic low-latitude ionosphere simulated by the Sheffield University Plasmasphere-Ionosphere Model-INPE (SUPIM-INPE). The results show that an anomalously low zonal wind was mainly responsible for the observed anomalous behavior in the zonal drift. A comparative study of the vertical plasma drifts obtained from magnetometer data for some periods of maximum (2000-2002) and minimum solar activity (1998, 2008, 2010) phases reveal a considerable decrease on the E-region conductivity and the dynamo electric field during 2008. However, we believe that the contribution of these characteristics to the unusual behavior of the zonal plasma drift is significantly smaller than that arising from the anomalously low zonal wind. The SUPIM-INPE result of the critical frequency of the F layer (foF2) over Jicamarca suggested a lower radiation flux than that predicted by solar irradiance model (SOLAR2000) for June 2008.

Role of zonal flows in trapped electron mode turbulence through nonlinear gyrokinetic particle and continuum simulationa)

NASA Astrophysics Data System (ADS)

Ernst, D. R.; Lang, J.; Nevins, W. M.; Hoffman, M.; Chen, Y.; Dorland, W.; Parker, S.

2009-05-01

Trapped electron mode (TEM) turbulence exhibits a rich variety of collisional and zonal flow physics. This work explores the parametric variation of zonal flows and underlying mechanisms through a series of linear and nonlinear gyrokinetic simulations, using both particle-in-cell and continuum methods. A new stability diagram for electron modes is presented, identifying a critical boundary at ηe=1, separating long and short wavelength TEMs. A novel parity test is used to separate TEMs from electron temperature gradient driven modes. A nonlinear scan of ηe reveals fine scale structure for ηe≳1, consistent with linear expectation. For ηe<1, zonal flows are the dominant saturation mechanism, and TEM transport is insensitive to ηe. For ηe>1, zonal flows are weak, and TEM transport falls inversely with a power law in ηe. The role of zonal flows appears to be connected to linear stability properties. Particle and continuum methods are compared in detail over a range of ηe=d ln Te/d ln ne values from zero to five. Linear growth rate spectra, transport fluxes, fluctuation wavelength spectra, zonal flow shearing spectra, and correlation lengths and times are in close agreement. In addition to identifying the critical parameter ηe for TEM zonal flows, this paper takes a challenging step in code verification, directly comparing very different methods of simulating simultaneous kinetic electron and ion dynamics in TEM turbulence.

Rossby and drift wave turbulence and zonal flows: The Charney-Hasegawa-Mima model and its extensions

NASA Astrophysics Data System (ADS)

Connaughton, Colm; Nazarenko, Sergey; Quinn, Brenda

2015-12-01

A detailed study of the Charney-Hasegawa-Mima model and its extensions is presented. These simple nonlinear partial differential equations suggested for both Rossby waves in the atmosphere and drift waves in a magnetically-confined plasma, exhibit some remarkable and nontrivial properties, which in their qualitative form, survive in more realistic and complicated models. As such, they form a conceptual basis for understanding the turbulence and zonal flow dynamics in real plasma and geophysical systems. Two idealised scenarios of generation of zonal flows by small-scale turbulence are explored: a modulational instability and turbulent cascades. A detailed study of the generation of zonal flows by the modulational instability reveals that the dynamics of this zonal flow generation mechanism differ widely depending on the initial degree of nonlinearity. The jets in the strongly nonlinear case further roll up into vortex streets and saturate, while for the weaker nonlinearities, the growth of the unstable mode reverses and the system oscillates between a dominant jet, which is slightly inclined to the zonal direction, and a dominant primary wave. A numerical proof is provided for the extra invariant in Rossby and drift wave turbulence-zonostrophy. While the theoretical derivations of this invariant stem from the wave kinetic equation which assumes weak wave amplitudes, it is shown to be relatively well-conserved for higher nonlinearities also. Together with the energy and enstrophy, these three invariants cascade into anisotropic sectors in the k-space as predicted by the Fjørtoft argument. The cascades are characterised by the zonostrophy pushing the energy to the zonal scales. A small scale instability forcing applied to the model has demonstrated the well-known drift wave-zonal flow feedback loop. The drift wave turbulence is generated from this primary instability. The zonal flows are then excited by either one of the generation mechanisms, extracting energy from the drift waves as they grow. Eventually the turbulence is completely suppressed and the zonal flows saturate. The turbulence spectrum is shown to diffuse in a manner which has been mathematically predicted. The insights gained from this simple model could provide a basis for equivalent studies in more sophisticated plasma and geophysical fluid dynamics models in an effort to fully understand the zonal flow generation, the turbulent transport suppression and the zonal flow saturation processes in both the plasma and geophysical contexts as well as other wave and turbulence systems where order evolves from chaos.

Two- and three-dimensional natural and mixed convection simulation using modular zonal models

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wurtz, E.; Nataf, J.M.; Winkelmann, F.

We demonstrate the use of the zonal model approach, which is a simplified method for calculating natural and mixed convection in rooms. Zonal models use a coarse grid and use balance equations, state equations, hydrostatic pressure drop equations and power law equations of the form {ital m} = {ital C}{Delta}{sup {ital n}}. The advantage of the zonal approach and its modular implementation are discussed. The zonal model resolution of nonlinear equation systems is demonstrated for three cases: a 2-D room, a 3-D room and a pair of 3-D rooms separated by a partition with an opening. A sensitivity analysis withmore » respect to physical parameters and grid coarseness is presented. Results are compared to computational fluid dynamics (CFD) calculations and experimental data.« less

Rossby Wave Propagation into the Northern Hemisphere Stratosphere: The Role of Zonal Phase Speed

NASA Astrophysics Data System (ADS)

Domeisen, Daniela I. V.; Martius, Olivia; Jiménez-Esteve, Bernat

2018-02-01

Sudden stratospheric warming (SSW) events are to a dominant part induced by upward propagating planetary waves. While theory predicts that the zonal phase speed of a tropospheric wave forcing affects wave propagation into the stratosphere, its relevance for SSW events has so far not been considered. This study shows in a linear wave diagnostic and in reanalysis data that phase speeds tend eastward as waves propagate upward, indicating that the stratosphere preselects eastward phase speeds for propagation, especially for zonal wave number 2. This also affects SSW events: Split SSW events tend to be preceded by anomalously eastward zonal phase speeds. Zonal phase speed may indeed explain part of the increased wave flux observed during the preconditioning of SSW events, as, for example, for the record 2009 SSW event.

Disturbance zonal and vertical plasma drifts in the Peruvian sector during solar minimum phases

NASA Astrophysics Data System (ADS)

Santos, A. M.; Abdu, M. A.; Souza, J. R.; Sobral, J. H. A.; Batista, I. S.

2016-03-01

In the present work, we investigate the behavior of the equatorial F region zonal plasma drifts over the Peruvian region under magnetically disturbed conditions during two solar minimum epochs, one of them being the recent prolonged solar activity minimum. The study utilizes the vertical and zonal components of the plasma drifts measured by the Jicamarca (11.95°S; 76.87°W) incoherent scatter radar during two events that occurred on 10 April 1997 and 24 June 2008 and model calculation of the zonal drift in a realistic ionosphere simulated by the Sheffield University Plasmasphere-Ionosphere Model-INPE. Two main points are focused: (1) the connection between electric fields and plasma drifts under prompt penetration electric field during a disturbed periods and (2) anomalous behavior of daytime zonal drift in the absence of any magnetic storm. A perfect anticorrelation between vertical and zonal drifts was observed during the night and in the initial and growth phases of the magnetic storm. For the first time, based on a realistic low-latitude ionosphere, we will show, on a detailed quantitative basis, that this anticorrelation is driven mainly by a vertical Hall electric field induced by the primary zonal electric field in the presence of an enhanced nighttime E region ionization. It is shown that an increase in the field line-integrated Hall-to-Pedersen conductivity ratio (∑H/∑P), which can arise from precipitation of energetic particles in the region of the South American Magnetic Anomaly, is capable of explaining the observed anticorrelation between the vertical and zonal plasma drifts. Evidence for the particle ionization is provided from the occurrence of anomalous sporadic E layers over the low-latitude station, Cachoeira Paulista (22.67°S; 44.9°W)—Brazil. It will also be shown that the zonal plasma drift reversal to eastward in the afternoon two hours earlier than its reference quiet time pattern is possibly caused by weakening of the zonal wind system during the prolonged solar minimum period.

Analysis of solute-protein interactions and solute-solute competition by zonal elution affinity chromatography.

PubMed

Tao, Pingyang; Poddar, Saumen; Sun, Zuchen; Hage, David S; Chen, Jianzhong

2018-02-02

Many biological processes involve solute-protein interactions and solute-solute competition for protein binding. One method that has been developed to examine these interactions is zonal elution affinity chromatography. This review discusses the theory and principles of zonal elution affinity chromatography, along with its general applications. Examples of applications that are examined include the use of this method to estimate the relative extent of solute-protein binding, to examine solute-solute competition and displacement from proteins, and to measure the strength of these interactions. It is also shown how zonal elution affinity chromatography can be used in solvent and temperature studies and to characterize the binding sites for solutes on proteins. In addition, several alternative applications of zonal elution affinity chromatography are discussed, which include the analysis of binding by a solute with a soluble binding agent and studies of allosteric effects. Other recent applications that are considered are the combined use of immunoextraction and zonal elution for drug-protein binding studies, and binding studies that are based on immobilized receptors or small targets. Copyright © 2018 Elsevier Inc. All rights reserved.

Effect of external plasma flows on the interaction between turbulence and convective cells

NASA Astrophysics Data System (ADS)

Uzawa, Ken; Li, Jiquan

2005-10-01

It is widely recognized that large scale structures, such as zonal flows, streamers and also long wavelength Kelvin-Helmholtz modes are nonlinearly generated from maternal turbulence through modulational instability process and play a crucial role in regulating the transport in tokamaks. In order to control the transport, it is desirable to control such structures and/or modulational process. One of control parameters may be mean flow which intrinsically exists in tokamak plasmas. Besides the direct influence on the transport through vortex decorrelation, the mean flow may indirectly change the zonal flow generation by acting on the modulational process itself. In this work, we theoretically investigate the characteristics of zonal flow generation due to the electron temperature gradient (ETG) turbulence in the presence of long wavelength ITG driven zonal flow. This was done by extending our previous modulational analyses[1]. We have numerically analyzed the influence of mean flow on zonal flow generation. The main result is that the zonal flow generation is suppressed by the presence of the mean flow. [1]J. Li, Y. Kishimoto, Physics of Plasmas, 9, 1241 (2002)

The Role of Monsoon-Like Zonally Asymmetric Heating in Interhemispheric Transport

NASA Technical Reports Server (NTRS)

Chen, Gang; Orbe, Clara; Waugh, Darryn

2017-01-01

While the importance of the seasonal migration of the zonally averaged Hadley circulation on interhemispheric transport of trace gases has been recognized, few studies have examined the role of the zonally asymmetric monsoonal circulation. This study investigates the role of monsoon-like zonally asymmetric heating on interhemispheric transport using a dry atmospheric model that is forced by idealized Newtonian relaxation to a prescribed radiative equilibrium temperature. When only the seasonal cycle of zonally symmetric heating is considered, the mean age of air in the Southern Hemisphere since last contact with the Northern Hemisphere midlatitude boundary layer, is much larger than the observations. The introduction of monsoon-like zonally asymmetric heating not only reduces the mean age of tropospheric air to more realistic values, but also produces an upper-tropospheric cross-equatorial transport pathway in boreal summer that resembles the transport pathway simulated in the NASA Global Modeling Initiative (GMI) Chemistry Transport Model driven with MERRA meteorological fields. These results highlight the monsoon-induced eddy circulation plays an important role in the interhemispheric transport of long-lived chemical constituents.

High-fidelity simulations of unsteady civil aircraft aerodynamics: stakes and perspectives. Application of zonal detached eddy simulation

PubMed Central

Deck, Sébastien; Gand, Fabien; Brunet, Vincent; Ben Khelil, Saloua

2014-01-01

This paper provides an up-to-date survey of the use of zonal detached eddy simulations (ZDES) for unsteady civil aircraft applications as a reflection on the stakes and perspectives of the use of hybrid methods in the framework of industrial aerodynamics. The issue of zonal or non-zonal treatment of turbulent flows for engineering applications is discussed. The ZDES method used in this article and based on a fluid problem-dependent zonalization is briefly presented. Some recent landmark achievements for conditions all over the flight envelope are presented, including low-speed (aeroacoustics of high-lift devices and landing gear), cruising (engine–airframe interactions), propulsive jets and off-design (transonic buffet and dive manoeuvres) applications. The implications of such results and remaining challenges in a more global framework are further discussed. PMID:25024411

Stationary zonal flows during the formation of the edge transport barrier in the JET tokamak

DOE PAGES

Hillesheim, J. C.; Meyer, H.; Maggi, C. F.; ...

2016-02-10

In this study, high spatial resolution Doppler backscattering measurements in JET have enabled new insights into the development of the edge E r. We observe fine-scale spatial structures in the edge E r well with a wave number k rρi ≈ 0.4-0.8, consistent with stationary zonal flows, the characteristics of which vary with density. The zonal flow amplitude and wavelength both decrease with local collisionality, such that the zonal flow E x B shear increases. Above the minimum of the L-H transition power threshold dependence on density, the zonal flows are present during L mode and disappear following the H-modemore » transition, while below the minimum they are reduced below measurable amplitude during L mode, before the L-H transition.« less

Numerical experiments with a general circulation model concerning the stratospheric distribution of ozone

NASA Technical Reports Server (NTRS)

Kurzeja, R. J.; Haggard, K. V.; Grose, W. L.

1981-01-01

Three experiments have been performed using a three-dimensional, spectral quasi-geostrophic model in order to investigate the sensitivity of ozone transport to tropospheric orographic and thermal effects and to the zonal wind distribution. In the first experiment, the ozone distribution averaged over the last 30 days of a 60 day transport simulation was determined; in the second experiment, the transport simulation was repeated, but nonzonal orographic and thermal forcing was omitted; and in the final experiment, the simulation was conducted with the intensity and position of the stratospheric jets altered by addition of a Newtonian cooling term to the zonal-mean diabatic heating rate. Results of the three experiments are summarized by comparing the zonal-mean ozone distribution, the amplitude of eddy geopotential height, the zonal winds, and zonal-mean diabatic heating.

Zonal flows and turbulence in fluids and plasmas

NASA Astrophysics Data System (ADS)

Parker, Jeffrey Bok-Cheung

In geophysical and plasma contexts, zonal flows are well known to arise out of turbulence. We elucidate the transition from statistically homogeneous turbulence without zonal flows to statistically inhomogeneous turbulence with steady zonal flows. Starting from the Hasegawa--Mima equation, we employ both the quasilinear approximation and a statistical average, which retains a great deal of the qualitative behavior of the full system. Within the resulting framework known as CE2, we extend recent understanding of the symmetry-breaking 'zonostrophic instability'. Zonostrophic instability can be understood in a very general way as the instability of some turbulent background spectrum to a zonally symmetric coherent mode. As a special case, the background spectrum can consist of only a single mode. We find that in this case the dispersion relation of zonostrophic instability from the CE2 formalism reduces exactly to that of the 4-mode truncation of generalized modulational instability. We then show that zonal flows constitute pattern formation amid a turbulent bath. Zonostrophic instability is an example of a Type I s instability of pattern-forming systems. The broken symmetry is statistical homogeneity. Near the bifurcation point, the slow dynamics of CE2 are governed by a well-known amplitude equation, the real Ginzburg-Landau equation. The important features of this amplitude equation, and therefore of the CE2 system, are multiple. First, the zonal flow wavelength is not unique. In an idealized, infinite system, there is a continuous band of zonal flow wavelengths that allow a nonlinear equilibrium. Second, of these wavelengths, only those within a smaller subband are stable. Unstable wavelengths must evolve to reach a stable wavelength; this process manifests as merging jets. These behaviors are shown numerically to hold in the CE2 system, and we calculate a stability diagram. The stability diagram is in agreement with direct numerical simulations of the quasilinear system. The use of statistically-averaged equations and the pattern formation methodology provide a path forward for further systematic investigations of zonal flows and their interactions with turbulence.

Fluid simulation of tokamak ion temperature gradient turbulence with zonal flow closure model

NASA Astrophysics Data System (ADS)

Yamagishi, Osamu; Sugama, Hideo

2016-03-01

Nonlinear fluid simulation of turbulence driven by ion temperature gradient modes in the tokamak fluxtube configuration is performed by combining two different closure models. One model is a gyrofluid model by Beer and Hammett [Phys. Plasmas 3, 4046 (1996)], and the other is a closure model to reproduce the kinetic zonal flow response [Sugama et al., Phys. Plasmas 14, 022502 (2007)]. By including the zonal flow closure, generation of zonal flows, significant reduction in energy transport, reproduction of the gyrokinetic transport level, and nonlinear upshift on the critical value of gradient scale length are observed.

Fluid simulation of tokamak ion temperature gradient turbulence with zonal flow closure model

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yamagishi, Osamu, E-mail: yamagisi@nifs.ac.jp; Sugama, Hideo

Nonlinear fluid simulation of turbulence driven by ion temperature gradient modes in the tokamak fluxtube configuration is performed by combining two different closure models. One model is a gyrofluid model by Beer and Hammett [Phys. Plasmas 3, 4046 (1996)], and the other is a closure model to reproduce the kinetic zonal flow response [Sugama et al., Phys. Plasmas 14, 022502 (2007)]. By including the zonal flow closure, generation of zonal flows, significant reduction in energy transport, reproduction of the gyrokinetic transport level, and nonlinear upshift on the critical value of gradient scale length are observed.

Zonal flow as pattern formation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parker, Jeffrey B.; Krommes, John A.

2013-10-15

Zonal flows are well known to arise spontaneously out of turbulence. We show that for statistically averaged equations of the stochastically forced generalized Hasegawa-Mima model, steady-state zonal flows, and inhomogeneous turbulence fit into the framework of pattern formation. There are many implications. First, the wavelength of the zonal flows is not unique. Indeed, in an idealized, infinite system, any wavelength within a certain continuous band corresponds to a solution. Second, of these wavelengths, only those within a smaller subband are linearly stable. Unstable wavelengths must evolve to reach a stable wavelength; this process manifests as merging jets.

Effect of Pelargonium reniforme roots on alcohol-induced liver damage and oxidative stress.

PubMed

Adewusi, Emmanuel Adekanmi; Afolayan, Anthony Jide

2010-09-01

Ethnobotanical surveys conducted on Pelargonium reniforme Curtis (Geraniaceae) have shown that the aqueous root extracts are used to treat alcohol-induced liver damage. We evaluated the antioxidant properties of the extract and its effects on alcohol-induced hepatotoxicity using Wistar rats. Alcohol-induced hepatotoxicity studies were carried out by observing the effect of the aqueous root extract on some liver marker enzymes, bilirubin, and total protein after liver damage. The levels of some phenolic compounds were determined by standard methods. Also, the reducing power of the plant extract and its ability to scavenge 1,1-diphenyl-2-picrylhydrazyl (DPPH*) and 2,2'-azinobis-3-ethylbenzothiazoline-6-sulfonic acid (ABTS*+) radicals were determined to evaluate its antioxidant activity. The results obtained show that the plant extract possessed significant antioxidant activity. It had a significant level of phenolic compounds, scavenged DPPH* and ABTS*+ radicals effectively, and demonstrated good reducing power. This may indicate that the plant contained compounds which can remove toxic metabolites following alcohol abuse. Serum analysis of animals treated with only ethanol showed a significant increase in the levels of liver marker enzymes and total and unconjugated bilirubin, while a significant decrease was observed in the levels of conjugated bilirubin and total proteins. Administration of the plant extract restored the levels of these markers to normal levels, and this indicates the ability of the plant extract to restore normal functioning of a damaged liver. The study shows that P. reniforme is a potential source of antioxidants and compounds which are useful in treating alcoholic liver damage.

Efficacy and tolerability of EPs 7630 in children and adolescents with acute bronchitis - a randomized, double-blind, placebo-controlled multicenter trial with a herbal drug preparation from Pelargonium sidoides roots.

PubMed

Kamin, W; Maydannik, V; Malek, F A; Kieser, M

2010-03-01

The study aim was to demonstrate the efficacy and to investigate the tolerability of EPs 7630, a herbal drug preparation from Pelargonium sidoides roots, in the treatment of patients (1 - 18 years) with acute bronchitis outside the strict indication for antibiotics. A total of 200 patients were randomized to receive either active drug containing EPs 7630 (1 - 6 years: 3 x 10 drops/d; > 6 - 12 years: 3 x 20 drops/d; > 12 - 18 years: 3 x 30 drops/d) or placebo for 7 consecutive days. change in the total score of bronchitis-specific symptoms (BSS) from Day 0 to Day 7. Main secondary outcome measures: treatment outcome, patients' satisfaction with treatment, onset of effect, bed rest. From baseline to Day 7, the mean BSS score improved significantly more for EPs 7630 compared with placebo (3.4 +/- 1.8 vs. 1.2 +/- 1.8 points, p < 0.0001). On Day 7, treatment outcome was significantly better (p < 0.0001), satisfaction with treatment more pronounced (77.6% vs. 25.8%, p < 0.0001), onset of effect faster, and time of bed rest shorter as compared with placebo. Tolerability was similarly good in both groups. All adverse events were assessed as non-serious. EPs 7630 was shown to be efficacious and safe in the treatment of acute bronchitis in children and adolescents outside the strict indication for antibiotics with patients treated with EPs 7630 perceiving a more favorable course of the disease and a good tolerability as compared with placebo.

A comparison of the momentum budget in reanalysis datasets during sudden stratospheric warming events

NASA Astrophysics Data System (ADS)

Martineau, Patrick; Son, Seok-Woo; Taguchi, Masakazu; Butler, Amy H.

2018-05-01

The agreement between reanalysis datasets, in terms of the zonal-mean momentum budget, is evaluated during sudden stratospheric warming (SSW) events. It is revealed that there is a good agreement among datasets in the lower stratosphere and troposphere concerning zonal-mean zonal wind, but less so in the upper stratosphere. Forcing terms of the momentum equation are also relatively similar in the lower atmosphere, but their uncertainties are typically larger than uncertainties of the zonal-wind tendency. Similar to zonal-wind tendency, the agreement among forcing terms is degraded in the upper stratosphere. Discrepancies among reanalyses increase during the onset of SSW events, a period characterized by unusually large fluxes of planetary-scale waves from the troposphere to the stratosphere, and decrease substantially after the onset. While the largest uncertainties in the resolved terms of the momentum budget are found in the Coriolis torque, momentum flux convergence also presents a non-negligible spread among the reanalyses. Such a spread is reduced in the latest reanalysis products, decreasing the uncertainty of the momentum budget. It is also found that the uncertainties in the Coriolis torque depend on the strength of SSW events: the SSW events that exhibit the most intense deceleration of zonal-mean zonal wind are subject to larger discrepancies among reanalyses. These uncertainties in stratospheric circulation, however, are not communicated to the troposphere.

Jet and storm track variability and change: adiabatic QG zonal averages and beyond... (Invited)

NASA Astrophysics Data System (ADS)

Robinson, W. A.

2013-12-01

The zonally averaged structures of extratropical jets and stormtracks, their slow variations, and their responses to climate change are all tightly constrained on the one hand by thermal wind balance and the necessary application of eddy torques to produce zonally averaged meridional motion, and, on the other hand, by the necessity that eddies propagate upshear to extract energy from the mean flow. Combining these constraints with the well developed theory of linear Rossby-wave propagation on zonally symmetric basic states has led to a large and growing number of plausible mechanisms to explain observed and modeled jet/storm track variability and responses to climate change and idealized forcing. Hidden within zonal averages is the reality that most baroclinic eddy activity is destroyed at the same latitude at which is generated: from one end to another of the fixed stormtracks in the Northern Hemisphere and baroclinic wave packets in the Southern Hemisphere. Ignored within adiabatic QG theory is the reality that baroclinic eddies gain significant energy from latent heating that involves sub-syntopic scale structures and dynamics. Here we use results from high-resolution regional and global simulations of the Northern Hemisphere storm tracks to explore the importance of non-zonal and diabatic dynamics in influencing jet change and variability and their influences on the much-studied zonal means.

Three-pattern decomposition of global atmospheric circulation: part II—dynamical equations of horizontal, meridional and zonal circulations

NASA Astrophysics Data System (ADS)

Hu, Shujuan; Cheng, Jianbo; Xu, Ming; Chou, Jifan

2018-04-01

The three-pattern decomposition of global atmospheric circulation (TPDGAC) partitions three-dimensional (3D) atmospheric circulation into horizontal, meridional and zonal components to study the 3D structures of global atmospheric circulation. This paper incorporates the three-pattern decomposition model (TPDM) into primitive equations of atmospheric dynamics and establishes a new set of dynamical equations of the horizontal, meridional and zonal circulations in which the operator properties are studied and energy conservation laws are preserved, as in the primitive equations. The physical significance of the newly established equations is demonstrated. Our findings reveal that the new equations are essentially the 3D vorticity equations of atmosphere and that the time evolution rules of the horizontal, meridional and zonal circulations can be described from the perspective of 3D vorticity evolution. The new set of dynamical equations includes decomposed expressions that can be used to explore the source terms of large-scale atmospheric circulation variations. A simplified model is presented to demonstrate the potential applications of the new equations for studying the dynamics of the Rossby, Hadley and Walker circulations. The model shows that the horizontal air temperature anomaly gradient (ATAG) induces changes in meridional and zonal circulations and promotes the baroclinic evolution of the horizontal circulation. The simplified model also indicates that the absolute vorticity of the horizontal circulation is not conserved, and its changes can be described by changes in the vertical vorticities of the meridional and zonal circulations. Moreover, the thermodynamic equation shows that the induced meridional and zonal circulations and advection transport by the horizontal circulation in turn cause a redistribution of the air temperature. The simplified model reveals the fundamental rules between the evolution of the air temperature and the horizontal, meridional and zonal components of global atmospheric circulation.

The 10-30-day oscillation of winter zonal wind in the entrance region of the East Asian subtropical jet and its relationship with precipitation in southern China

NASA Astrophysics Data System (ADS)

Yao, Chenyu; Huang, Qian; Zhu, Bin; Liu, Fei

2018-06-01

Using ECMWF ERA-Interim 6-h reanalysis data, zonal wind intra-seasonal oscillations (ISOs) in the entrance region of the East Asian subtropical westerly jet (EASWJ) in winter from 1979/1980 to 2012/2013 are studied. The results first show that there is an area with large ISO strength in the northwest of the EASWJ; in the key region, zonal wind has a dominant period of 10-30 days. The composite analysis reveals that zonal wind at 200 hPa in this key region has 10-30-day oscillation characteristics. On the 10-30-day time scale, the center of zonal wind anomaly moves eastward. The propagation of zonal wind oscillation relates to temperature tendencies at different latitudes. The remarkable increase (or decrease) in zonal wind in the key region is mostly determined by temperature anomalies to the north. The 10-30-day filtered temperature advection to the north of the key region leads to either a decrease or an increase in temperature; on the other hand, temperature variations south of the key region have trends opposite of the northern trends, which changes the temperature gradient. On the 10-30-day time scale, zonal wind anomalies are associated with precipitation in southern China. When there are easterly wind anomalies over the key region, precipitation occurs over the Yangtze River basin and its south. Diabatic heating during precipitation corresponds with warming to the south of the key region, which combines with the temperature advection to weaken the easterly wind and strengths the westerly wind. Then, the intra-seasonal precipitation moves to southwest China with warm advection and the enhanced westerly wind, which brings the positive relative vorticity advection there.

Climatology of mesopause region nocturnal temperature, zonal wind, and sodium density observed by sodium lidar over Hefei, China (32°N, 117°E)

NASA Astrophysics Data System (ADS)

Li, T.; Ban, C.; Fang, X.; Li, J.; Wu, Z.; Xiong, J.; Feng, W.; Plane, J. M. C.

2017-12-01

The University of Science and Technology of China narrowband sodium temperature/wind lidar, located in Hefei, China (32°N, 117°E), was installed in November 2011 and have made routine nighttime measurements since January 2012. We obtained 154 nights ( 1400 hours) of vertical profiles of temperature, sodium density, and zonal wind, and 83 nights ( 800 hours) of vertical flux of gravity wave (GW) zonal momentum in the mesopause region (80-105 km) during the period of 2012 to 2016. In temperature, it is likely that the diurnal tide dominates below 100 km in spring, while the semidiurnal tide dominates above 100 km throughout the year. A clear semiannual variation in temperature is revealed near 90 km, likely related to the tropical mesospheric semiannual oscillation (MSAO). The variability of sodium density is positively correlated with temperature, suggesting that in addition to dynamics, the chemistry may also play an important role in the formation of sodium atoms. The observed sodium peak density is 1000 cm-3 higher than that simulated by the model. In zonal wind, the diurnal tide dominates in both spring and fall, while semidiurnal tide dominates in winter. The observed semiannual variation in zonal wind near 90 km is out-of-phase with that in temperature, consistent with tropical MSAO. The GW zonal momentum flux is mostly westward in fall and winter, anti-correlated with eastward zonal wind. The annual mean flux averaged over 87-97 km is -0.3 m2/s2 (westward), anti-correlated with eastward zonal wind of 10 m/s. The comparisons of lidar results with those observed by satellite, nearby radar, and simulated by model show generally good agreements.

Observed variability in the upper layers at the Equator, 90°E in the Indian Ocean during 2001-2008, 1: zonal currents

NASA Astrophysics Data System (ADS)

Rao, R. R.; Horii, T.; Masumoto, Y.; Mizuno, K.

2017-08-01

The observed variability of zonal currents (ZC) at the Equator, 90°E shows a strong seasonal cycle in the near-surface 40-350 m water column with periodic east-west reversals most pronounced at semiannual frequency. Superposed on this, a strong intraseasonal variability of 30-90 day periodicity is also prominently seen in the near-surface layer (40-80 m) almost throughout the year with the only exception of February-March. An eastward flowing equatorial undercurrent (EUC) is present in the depth range of 80-160 m during March-April and October-November. The observed intraseasonal variability in the near-surface layer is primarily determined by the equatorial zonal westerly wind bursts (WWBs) through local frictional coupling between the zonal flow in the surface layer and surface zonal winds and shows large interannual variability. The eastward flowing EUC maintained by the ZPG set up by the east-west slope of the thermocline remotely controlled by the zonal wind (ZW) and zonally propagating wave fields also shows significant interannual variability. This observed variability on interannual time scales appears to be controlled by the corresponding variability in the alongshore winds off the Somalia coast during the preceding boreal winter, the ZW field along the equator, and the associated zonally propagating Kelvin and Rossby waves. The salinity induced vertical stratification observed in the near-surface layer through barrier layer thickness (BLT) effects also shows a significant influence on the ZC field on intraseasonal time scale. Interestingly, among all the 8 years (2001-2008), relatively weaker annual cycle is seen in both ZC in the 40-350 m water column and boreal spring sea surface temperature (SST) only during 2001 and 2008 along the equator caused through propagating wave dynamics.

Parameterization of eddy sensible heat transports in a zonally averaged dynamic model of the atmosphere

NASA Technical Reports Server (NTRS)

Genthon, Christophe; Le Treut, Herve; Sadourny, Robert; Jouzel, Jean

1990-01-01

A Charney-Branscome based parameterization has been tested as a way of representing the eddy sensible heat transports missing in a zonally averaged dynamic model (ZADM) of the atmosphere. The ZADM used is a zonally averaged version of a general circulation model (GCM). The parameterized transports in the ZADM are gaged against the corresponding fluxes explicitly simulated in the GCM, using the same zonally averaged boundary conditions in both models. The Charney-Branscome approach neglects stationary eddies and transient barotropic disturbances and relies on a set of simplifying assumptions, including the linear appoximation, to describe growing transient baroclinic eddies. Nevertheless, fairly satisfactory results are obtained when the parameterization is performed interactively with the model. Compared with noninteractive tests, a very efficient restoring feedback effect between the modeled zonal-mean climate and the parameterized meridional eddy transport is identified.

Regulation of electron temperature gradient turbulence by zonal flows driven by trapped electron modes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Asahi, Y., E-mail: y.asahi@nr.titech.ac.jp; Tsutsui, H.; Tsuji-Iio, S.

2014-05-15

Turbulent transport caused by electron temperature gradient (ETG) modes was investigated by means of gyrokinetic simulations. It was found that the ETG turbulence can be regulated by meso-scale zonal flows driven by trapped electron modes (TEMs), which are excited with much smaller growth rates than those of ETG modes. The zonal flows of which radial wavelengths are in between the ion and the electron banana widths are not shielded by trapped ions nor electrons, and hence they are effectively driven by the TEMs. It was also shown that an E × B shearing rate of the TEM-driven zonal flows is larger thanmore » or comparable to the growth rates of long-wavelength ETG modes and TEMs, which make a main contribution to the turbulent transport before excitation of the zonal flows.« less

High-fidelity simulations of unsteady civil aircraft aerodynamics: stakes and perspectives. Application of zonal detached eddy simulation.

PubMed

Deck, Sébastien; Gand, Fabien; Brunet, Vincent; Ben Khelil, Saloua

2014-08-13

This paper provides an up-to-date survey of the use of zonal detached eddy simulations (ZDES) for unsteady civil aircraft applications as a reflection on the stakes and perspectives of the use of hybrid methods in the framework of industrial aerodynamics. The issue of zonal or non-zonal treatment of turbulent flows for engineering applications is discussed. The ZDES method used in this article and based on a fluid problem-dependent zonalization is briefly presented. Some recent landmark achievements for conditions all over the flight envelope are presented, including low-speed (aeroacoustics of high-lift devices and landing gear), cruising (engine-airframe interactions), propulsive jets and off-design (transonic buffet and dive manoeuvres) applications. The implications of such results and remaining challenges in a more global framework are further discussed. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

A PRELIMINARY JUPITER MODEL

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hubbard, W. B.; Militzer, B.

In anticipation of new observational results for Jupiter's axial moment of inertia and gravitational zonal harmonic coefficients from the forthcoming Juno orbiter, we present a number of preliminary Jupiter interior models. We combine results from ab initio computer simulations of hydrogen–helium mixtures, including immiscibility calculations, with a new nonperturbative calculation of Jupiter's zonal harmonic coefficients, to derive a self-consistent model for the planet's external gravity and moment of inertia. We assume helium rain modified the interior temperature and composition profiles. Our calculation predicts zonal harmonic values to which measurements can be compared. Although some models fit the observed (pre-Juno) second-more » and fourth-order zonal harmonics to within their error bars, our preferred reference model predicts a fourth-order zonal harmonic whose absolute value lies above the pre-Juno error bars. This model has a dense core of about 12 Earth masses and a hydrogen–helium-rich envelope with approximately three times solar metallicity.« less

Subsurface Zonal and Meridional Flows from SDO/HMI

NASA Astrophysics Data System (ADS)

Komm, Rudolf; Howe, Rachel; Hill, Frank

2016-10-01

We study the solar-cycle variation of the zonal and meridional flows in the near-surface layers of the solar convection zone from the surface to a depth of about 16 Mm. The flows are determined from SDO/HMI Dopplergrams using the HMI ring-diagram pipeline. The zonal and meridional flows vary with the solar cycle. Bands of faster-than-average zonal flows together with more-poleward-than-average meridional flows move from mid-latitudes toward the equator during the solar cycle and are mainly located on the equatorward side of the mean latitude of solar magnetic activity. Similarly, bands of slower-than-average zonal flows together with less-poleward-than-average meridional flows are located on the poleward side of the mean latitude of activity. Here, we will focus on the variation of these flows at high latitudes (poleward of 50 degree) that are now accessible using HMI data. We will present the latest results.

Theory of Fine-scale Zonal Flow Generation From Trapped Electron Mode Turbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lu Wang and T.S. Hahm

Most existing zonal flow generation theory has been developed with a usual assumption of qrρθ¡ << 1 (qr is the radial wave number of zonal flow, and ρθ¡ is the ion poloidal gyrora- dius). However, recent nonlinear gyrokinetic simulations of trapped electron mode (TEM) turbulence exhibit a relatively short radial scale of the zonal flows with qrρθ¡ ~ 1 [Z. Lin et al., IAEA-CN/TH/P2-8 (2006); D. Ernst et al., Phys. Plasmas 16, 055906 (2009)]. This work reports an extension of zonal flow growth calculation to this short wavelength regime via the wave kinetics approach. A generalized expression for the polarizationmore » shielding for arbitrary radial wavelength [Lu Wang and T.S. Hahm, to appear in Phys. Plasmas (2009)] which extends the Rosenbluth-Hinton formula in the long wavelength limit is applied.« less

Absence of sex differential plasticity to light availability during seed maturation in Geranium sylvaticum.

PubMed

Varga, Sandra; Laaksonen, Ester; Siikamäki, Pirkko; Kytöviita, Minna-Maarit

2015-01-01

Sex-differential plasticity (SDP) hypothesis suggests that since hermaphrodites gain fitness through both pollen and seed production they may have evolved a higher degree of plasticity in their reproductive strategy compared to females which achieve fitness only through seed production. SDP may explain the difference in seed production observed between sexes in gynodioecious species in response to resource (nutrients or water) availability. In harsh environments, hermaphrodites decrease seed production whereas females keep it relatively similar regardless of the environmental conditions. Light availability can be also a limiting resource and thus could theoretically affect differently female and hermaphrodite seed output even though this ecological factor has been largely overlooked. We tested whether the two sexes in the gynodioecious species Geranium sylvaticum differ in their tolerance to light limitation during seed maturation in the field. We used a fully factorial block experiment exposing female and hermaphrodite plants to two different light environments (control and shade) after their peak flowering period. Specifically, we measured fruit and seed production in response to decreased light availability and compared it between the sexes. Shading reduced the number of fruits and seeds produced, but the decrease was similar between the sexes. Furthermore, shading delayed seed production by three days in both sexes, but did not affect seed mass, seed P content, or the probability of re-flowering the following year. Our results give no evidence for reproductive SDP in response to light during seed maturation.

Variable mycorrhizal benefits on the reproductive output of Geranium sylvaticum, with special emphasis on the intermediate phenotype.

PubMed

Varga, S; Kytöviita, M-M

2014-03-01

In several gynodioecious species, intermediate sex between female and hermaphrodite has been reported, but few studies have investigated fitness parameters of this intermediate phenotype. Here, we examined the interactions between plant sex and arbuscular mycorrhizal (AM) fungal species affecting the reproductive output of Geranium sylvaticum, a sexually polymorphic plant species with frequent intermediate sexes between females and hermaphrodites, using a common garden experiment. Flowering phenology, AM colonisation levels and several plant vegetative and reproductive parameters, including seed and pollen production, were measured. Differences among sexes were detected in flowering, fruit set, pollen production and floral size. The two AM species used in the present work had different effects on plant fitness parameters. One AM species increased female fitness through increasing seed number and seed mass, while the other species reduced seed mass in all sexes investigated. AM fungi did not affect intermediate and hermaphrodite pollen content in anthers. The three sexes in G. sylvaticum did not differ in their reproductive output in terms of total seed production, but hermaphrodites had potentially larger fathering ability than intermediates due to higher anther number. The ultimate female function--seed production--did not differ among the sexes, but one of the AM fungi used potentially decreased host plant fitness. In addition, in the intermediate sex, mycorrhizal symbiosis functioned similarly in females as in hermaphrodites. © 2013 German Botanical Society and The Royal Botanical Society of the Netherlands.

The observed life cycle of a baroclinic instability

NASA Technical Reports Server (NTRS)

Randel, W. J.; Stanford, J. L.

1985-01-01

Medium-scale waves (zonal wavenumbers 4-7) frequently dominate Southern Hemisphere summer circulation patterns. Randel and Stanford have studied the dynamics of these features, demonstrating that the medium-scale waves result from baroclinic excitation and exhibit well-defined life cycles. This study details the evolution of the medium-scale waves during a particular life cycle. The specific case chosen exhibits a high degree of zonal symmetry, prompting study based upon zonally averaged diagnostics. An analysis of the medium-scale wave energetics reveals a well-defined life cycle of baroclinic growth, maturity, and barotropic decay. Eliassen-Palm flux diagrams detail the daily wave structure and its interaction with the zonally-averaged flow.

Cattaraugus Creek Harbor, New York General Design Memorandum. Phase II. (Detailed Design). Volume II. Appendix E. Littoral Processes and Sedimentation in the Cattaraugus Embayment, New York. Appendix F. Sediment Transport in Cattaraugus Creek.

DTIC Science & Technology

1976-03-01

beaches than any other part of the southeastern shoreline of Lake Erie . It is the only major sand accumulation zone with the exception of Presque Isle , in...52 20. Photographs of zonal site #10. 54 21. Photograph and map of zonal site #11, Presque Isle , Pa. 57 F22. Photographs and beach profiles at zonal...site #11. 59 23. Photograph of zonal site #12, the recurved spit area on Presque Isle , Pa. 62 24. Block diagram of recurved spit area of Presque Isle

Frequency-dependent behavior of the barotropic and baroclinic modes of zonal jet variability

NASA Astrophysics Data System (ADS)

Sheshadri, A.; Plumb, R. A.

2016-12-01

Stratosphere-troposphere interactions are frequently described in terms of the leading modes of variability, i.e. the annular modes. An idealized dynamical core model is used to explore the differences between the low- and high- frequency (periods greater and less than 30 days) behavior of the first two principal components of zonal mean zonal wind and eddy kinetic energy, i.e., the barotropic/baroclinic annular modes of variability of the extratropical circulation. The modes show similar spatial characteristics in the different frequency ranges considered, however the ranking of the modes switches in some cases from one range to the other. There is some cancelation in the signatures of eddy heat flux and eddy kinetic energy in the leading low-pass and high-pass filtered zonal wind mode, partly explaining their small signature in the total. At low frequencies, the first zonal wind mode describes latitudinal shifts of both the midlatitude jet and its associated storm tracks, and the persistence of zonal wind anomalies appears to be sustained primarily by a baroclinic, rather than a barotropic, feedback. On shorter time scales, the behavior is more complicated and transient.

Numerical simulation on zonal disintegration in deep surrounding rock mass.

PubMed

Chen, Xuguang; Wang, Yuan; Mei, Yu; Zhang, Xin

2014-01-01

Zonal disintegration have been discovered in many underground tunnels with the increasing of embedded depth. The formation mechanism of such phenomenon is difficult to explain under the framework of traditional rock mechanics, and the fractured shape and forming conditions are unclear. The numerical simulation was carried out to research the generating condition and forming process of zonal disintegration. Via comparing the results with the geomechanical model test, the zonal disintegration phenomenon was confirmed and its mechanism is revealed. It is found to be the result of circular fracture which develops within surrounding rock mass under the high geostress. The fractured shape of zonal disintegration was determined, and the radii of the fractured zones were found to fulfill the relationship of geometric progression. The numerical results were in accordance with the model test findings. The mechanism of the zonal disintegration was revealed by theoretical analysis based on fracture mechanics. The fractured zones are reportedly circular and concentric to the cavern. Each fracture zone ruptured at the elastic-plastic boundary of the surrounding rocks and then coalesced into the circular form. The geometric progression ratio was found to be related to the mechanical parameters and the ground stress of the surrounding rocks.

Numerical Simulation on Zonal Disintegration in Deep Surrounding Rock Mass

PubMed Central

Chen, Xuguang; Wang, Yuan; Mei, Yu; Zhang, Xin

2014-01-01

Zonal disintegration have been discovered in many underground tunnels with the increasing of embedded depth. The formation mechanism of such phenomenon is difficult to explain under the framework of traditional rock mechanics, and the fractured shape and forming conditions are unclear. The numerical simulation was carried out to research the generating condition and forming process of zonal disintegration. Via comparing the results with the geomechanical model test, the zonal disintegration phenomenon was confirmed and its mechanism is revealed. It is found to be the result of circular fracture which develops within surrounding rock mass under the high geostress. The fractured shape of zonal disintegration was determined, and the radii of the fractured zones were found to fulfill the relationship of geometric progression. The numerical results were in accordance with the model test findings. The mechanism of the zonal disintegration was revealed by theoretical analysis based on fracture mechanics. The fractured zones are reportedly circular and concentric to the cavern. Each fracture zone ruptured at the elastic-plastic boundary of the surrounding rocks and then coalesced into the circular form. The geometric progression ratio was found to be related to the mechanical parameters and the ground stress of the surrounding rocks. PMID:24592166

Secular variations in zonal harmonics of Earth's geopotential and their implications for mantle viscosity and Antarctic melting history due to the last deglaciation

NASA Astrophysics Data System (ADS)

Nakada, Masao; Okuno, Jun'ichi

2017-06-01

Secular variations in zonal harmonics of Earth's geopotential based on the satellite laser ranging observations, {\\dot{J}_n}, contain important information about the Earth's deformation due to the glacial isostatic adjustment (GIA) and recent melting of glaciers and the Greenland and Antarctic ice sheets. Here, we examine the GIA-induced {\\dot{J}_n}, \\dot{J}_n^{GIA} (2 ≤ n ≤ 6), derived from the available geopotential zonal secular rate and recent melting taken from the IPCC 2013 Report (AR5) to explore the possibility of additional information on the depth-dependent lower-mantle viscosity and GIA ice model inferred from the analyses of the \\dot{J}_2^{GIA} and relative sea level changes. The sensitivities of the \\dot{J}_n^{GIA} to lower-mantle viscosity and GIA ice model with a global averaged eustatic sea level (ESL) of ∼130 m indicate that the secular rates for n = 3 and 4 are mainly caused by the viscous response of the lower mantle to the melting of the Antarctic ice sheet regardless of GIA ice models adopted in this study. Also, the analyses of the \\dot{J}_n^{GIA} based on the available geopotential zonal secular rates indicate that permissible lower-mantle viscosity structure satisfying even zonal secular rates of n = 2, 4 and 6 is obtained for the GIA ice model with an Antarctic ESL component of ∼20 or ∼30 m, but there is no viscosity solution satisfying \\dot{J}_3^{GIA} and \\dot{J}_5^{GIA} values. Moreover, the inference model for the lower-mantle viscosity and GIA ice model from each odd zonal secular rate is distinctly different from that satisfying GIA-induced even zonal secular rate. The discrepancy between the inference models for the even and odd zonal secular rates may partly be attributed to uncertainties of the geopotential zonal secular rates for n > 2 and particularly those for odd zonal secular rates due to weakness in the orbital geometry. If this problem is overcome at least for the secular rates of n < 5, then the analyses of the \\dot{J}_n^{GIA} would make it possible to put more convincing constraints on the lower-mantle viscosity structure and GIA ice model, particularly for the controversial Antarctic melting history in GIA community.

Atmospheric Response to Zonal Variations in Midlatitude SST: Transient and Stationary Eddies and Their Feedback(.

NASA Astrophysics Data System (ADS)

Inatsu, Masaru; Mukougawa, Hitoshi; Xie, Shang-Ping

2003-10-01

Midwinter storm track response to zonal variations in midlatitude sea surface temperatures (SSTs) has been investigated using an atmospheric general circulation model under aquaplanet and perpetual-January conditions. Zonal wavenumber-1 SST variations with a meridionally confined structure are placed at various latitudes. Having these SST variations centered at 30°N leads to a zonally localized storm track, while the storm track becomes nearly zonally uniform when the same SST forcing is moved farther north at 40° and 50°N. Large (small) baroclinic energy conversion north of the warm (cold) SST anomaly near the axis of the storm track (near 40°N) is responsible for the large (small) storm growth. The equatorward transfer of eddy kinetic energy by the ageostrophic motion and the mechanical damping are important to diminish the storm track activity in the zonal direction.Significant stationary eddies form in the upper troposphere, with a ridge (trough) northeast of the warm (cold) SST anomaly at 30°N. Heat and vorticity budget analyses indicate that zonally localized condensational heating in the storm track is the major cause for these stationary eddies, which in turn exert a positive feedback to maintain the localized storm track by strengthening the vertical shear near the surface. These results indicate an active role of synoptic eddies in inducing deep, tropospheric-scale response to midlatitude SST variations. Finally, the application of the model results to the real atmosphere is discussed.

Hepatoprotective effect of Geranium schiedeanum against ethanol toxicity during liver regeneration

PubMed Central

Madrigal-Santillán, Eduardo; Bautista, Mirandeli; Gayosso-De-Lucio, Juan A; Reyes-Rosales, Yadira; Posadas-Mondragón, Araceli; Morales-González, Ángel; Soriano-Ursúa, Marvin A; García-Machorro, Jazmín; Madrigal-Bujaidar, Eduardo; Álvarez-González, Isela; Morales-González, José A

2015-01-01

AIM: To evaluate the effect of an extract of Geranium schiedeanum (Gs) as a hepatoprotective agent against ethanol (EtOH)-induced toxicity in rats. METHODS: Male Wistar rats weighing 200-230 g were subjected to a 70% partial hepatectomy (PH); they were then divided into three groups (groups 1-3). During the experiment, animals in group 1 drank only water. The other two groups (2-3) drank an aqueous solution of EtOH (40%, v/v). Additionally, rats in group 3 received a Gs extract daily at a dose of 300 mg/kg body weight intragastically. Subsequently, to identify markers of liver damage in serum, alanine aminotransferase, aspartate aminotransferase, albumin and bilirubin were measured by colorimetric methods. Glucose, triglyceride and cholesterol concentrations were also determined. In addition, oxidative damage was estimated by measuring lipid peroxidation [using thiobarbituric-acid reactive substances (TBARS)] in both plasma and the liver and by measuring the total concentration of antioxidants in serum and the total antioxidant capacity in the liver. In addition, a liver mass gain assessment, total DNA analysis and a morpho-histological analysis of the liver from animals in all three groups were performed and compared. Finally, the number of deaths observed in the three groups was analyzed. RESULTS: Administration of the Geranium shiedeanum extract significantly reduced the unfavorable effect of ethanol on liver regeneration (restitution liver mass: PH-EtOH group 60.68% vs PH-Gs-EtOH group 69.22%). This finding was congruent with the reduced levels of hepatic enzymes and the sustained or increased levels of albumin and decreased bilirubin in serum. The extract also modified the metabolic processes that regulate glucose and lipid levels, as observed from the serum measurements. Lower antioxidant levels and the liver damage induced by EtOH administration appeared to be mitigated by the extract, as observed from the TBARs (PH-EtOH group 200.14 mmol/mg vs PH-Gs-EtOH group 54.20 mmol/mg; P < 0.05), total status of antioxidants (PH-EtOH group 1.43 mmol/L vs PH-Gs-EtOH group 1.99 mmol/L; P < 0.05), total antioxidant capacity values, liver mass gain and total DNA determination (PH-EtOH group 4.80 mg/g vs PH-Gs-EtOH 9.10 mg/g; P < 0.05). Overall, these processes could be related to decreased mortality in these treated animals. CONCLUSION: The administered extract showed a hepatoprotective effect, limiting the EtOH-induced hepatotoxic effects. This effect can be related to modulating oxido-reduction processes. PMID:26167072

Zonal Flows and Turbulence in Fluids and Plasmas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parker, Jeffrey

2014-09-01

In geophysical and plasma contexts, zonal flows are well known to arise out of turbulence. We elucidate the transition from statistically homogeneous turbulence without zonal flows to statistically inhomogeneous turbulence with steady zonal flows. Starting from the Hasegawa--Mima equation, we employ both the quasilinear approximation and a statistical average, which retains a great deal of the qualitative behavior of the full system. Within the resulting framework known as CE2, we extend recent understanding of the symmetry-breaking `zonostrophic instability'. Zonostrophic instability can be understood in a very general way as the instability of some turbulent background spectrum to a zonally symmetricmore » coherent mode. As a special case, the background spectrum can consist of only a single mode. We find that in this case the dispersion relation of zonostrophic instability from the CE2 formalism reduces exactly to that of the 4-mode truncation of generalized modulational instability. We then show that zonal flows constitute pattern formation amid a turbulent bath. Zonostrophic instability is an example of a Type Is instability of pattern-forming systems. The broken symmetry is statistical homogeneity. Near the bifurcation point, the slow dynamics of CE2 are governed by a well-known amplitude equation, the real Ginzburg-Landau equation. The important features of this amplitude equation, and therefore of the CE2 system, are multiple. First, the zonal flow wavelength is not unique. In an idealized, infinite system, there is a continuous band of zonal flow wavelengths that allow a nonlinear equilibrium. Second, of these wavelengths, only those within a smaller subband are stable. Unstable wavelengths must evolve to reach a stable wavelength; this process manifests as merging jets. These behaviors are shown numerically to hold in the CE2 system, and we calculate a stability diagram. The stability diagram is in agreement with direct numerical simulations of the quasilinear system. The use of statistically-averaged equations and the pattern formation methodology provide a path forward for further systematic investigations of zonal flows and their interactions with turbulence.« less

Jupiter: New estimates of mean zonal flow at the cloud level

NASA Technical Reports Server (NTRS)

Limaye, Sanjay S.

1986-01-01

In order to reexamine the magnitude differences of the Jovian atmosphere's jets, as determined by Voyager 1 and 2 images, a novel approach is used to ascertain the zonal mean east-west component of motion. This technique is based on digital pattern matching, and is applied on pairs of mapped images to yield a profile of the mean zonal component that reproduces the exact locations of the easterly and westerly jets between + and 60 deg latitude. Results were obtained for all of the Voyager 1 and 2 cylindrical mosaics; the correlation coefficient between Voyagers 1 and 2 in mean zonal flow between + and - 60 deg latitude, determined from violet filter mosaics, is 0.998.

Time-varying zonal asymmetries in stratospheric nitrous oxide and methane

NASA Technical Reports Server (NTRS)

Gao, H.; Stanford, J. L.

1993-01-01

Previously analyses of Stratospheric And Mesospheric Sounder (SAMS) data of atmospheric constituent gases have dealt almost exclusively with zonal means (and mostly monthly means), owing perhaps to concern over data quality. The purpose of this note is to show that, with care, time-dependent zonally-asymmetric features may be recovered from the SAMS nitrous oxide and methane data. As an example, we demonstrate the existence of zonal wave-1 constituent perturbations with periods of a few weeks in the middle and upper stratosphere. When the perturbations are normalized by the constituent zonal-mean mixing ratio to compensate for the slowly varying (in both space and time) background concentration of constituents, wavepacket-like features are found over all latitudes and seasons in the three-year SAMS record. One specific low-latitude case discussed had features which appear to be consistent with constituent oscillations induced by episodic equatorial Kelvin waves. Further studies are needed to better identify the nature of the plethora of observed wave-like phenomena.

Numerical simulation of phenomenon on zonal disintegration in deep underground mining in case of unsupported roadway

NASA Astrophysics Data System (ADS)

Han, Fengshan; Wu, Xinli; Li, Xia; Zhu, Dekang

2018-02-01

Zonal disintegration phenomenon was found in deep mining roadway surrounding rock. It seriously affects the safety of mining and underground engineering and it may lead to the occurrence of natural disasters. in deep mining roadway surrounding rock, tectonic stress in deep mining roadway rock mass, horizontal stress is much greater than the vertical stress, When the direction of maximum principal stress is parallel to the axis of the roadway in deep mining, this is the main reasons for Zonal disintegration phenomenon. Using ABAQUS software to numerical simulation of the three-dimensional model of roadway rupture formation process systematically, and the study shows that when The Direction of maximum main stress in deep underground mining is along the roadway axial direction, Zonal disintegration phenomenon in deep underground mining is successfully reproduced by our numerical simulation..numerical simulation shows that using ABAQUA simulation can reproduce Zonal disintegration phenomenon and the formation process of damage of surrounding rock can be reproduced. which have important engineering practical significance.

Effect of resonant magnetic perturbations on secondary structures in drift-wave turbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leconte, M.; Diamond, P. H.; CMTFO and CASS, UCSD, California 92093

2011-08-15

Recent experiments showed a decrease of long range correlations during the application of resonant magnetic perturbations (RMPs) [Y. Xu et al., Nucl. Fusion 51, 063020 (2011)]. This finding suggests that RMPs damp zonal flows. To elucidate the effect of the RMPs on zonal structures in drift wave turbulence, we construct a generalized Hasegawa-Wakatani model including RMP fields. The effect of the RMPs is to induce a linear coupling between the zonal electric field and the zonal density gradient, which drives the system to a state of electron radial force balance for large RMP amplitude. A predator-prey model coupling the primarymore » drift wave dynamics to the zonal modes evolution is derived. This model has both turbulence drive and RMP amplitude as control parameters and predicts a novel type of transport bifurcation in the presence of RMPs. The novel regime has a power threshold which increases with RMP amplitude as {gamma}{sub c}{approx}[({delta}B{sub r}/B)]{sup 2}.« less

The modulational instability in the extended Hasegawa-Mima equation with a finite Larmor radius

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gallagher, S.; Hnat, B.; Rowlands, G.

2012-12-15

The effects of the finite Larmor radius on the generation of zonal flows by the four-wave modulational instability are investigated using an extended form of the Hasegawa-Mima equation. Growth rates of the zonal mode are quantified using analytical predictions from a four-mode truncated model, as well as from direct numerical simulation of the nonlinear extended Hasegawa-Mima equation. We not only consider purely zonal flows but also examine the generic oblique case and show that, for small Larmor radii, off-axis modes may become dominant. We find a key parameter M{sub {rho}} which characterises the behaviour of the system due to changesmore » in the Larmor radius. We find that, similarly to previous results obtained by changing the driving wave amplitude, two separate dynamical regimes can be accessed. These correspond to oscillatory energy transfer between zonal flows and a driving wave and the fully saturated zonal flow.« less

Gravitational Anomalies Caused by Zonal Winds in Jupiter

NASA Astrophysics Data System (ADS)

Schubert, G.; Kong, D.; Zhang, K.

2012-12-01

We present an accurate three-dimensional non-spherical numerical calculation of the gravitational anomalies caused by zonal winds in Jupiter. The calculation is based on a three-dimensional finite element method and accounts for the full effect of significant departure from spherical geometry caused by rapid rotation. Since the speeds of Jupiter's zonal winds are much smaller than that of its rigid-body rotation, our numerical calculation is carried out in two stages. First, we compute the non-spherical distributions of density and pressure at the equilibrium within Jupiter via a hybrid inverse approach by determining an a priori unknown coefficient in the polytropic equation of state that results in a match to the observed shape of Jupiter. Second, by assuming that Jupiter's zonal winds extend throughout the interior along cylinders parallel to the rotation axis, we compute gravitational anomalies produced by the wind-related density anomalies, providing an upper bound to the gravitational anomalies caused by the Jovian zonal winds.

Zonally Asymmetric Ozone and the Morphology of the Planetary Waveguide

DTIC Science & Technology

2011-07-15

sections for the 271 troposphere , J. Atmos. Sci., 37, 2600-2616. 272 Eyring, V., et al. (2007), Multimodel projections of stratospheric ozone ...GEOPHYSICAL RESEARCH LETTERS, VOL. ???, XXXX, DOI:10.1029/, JULY 15, 2011 Zonally asymmetric ozone and the morphology of the 1 planetary waveguide...that zonally asymmetric 6 ozone (ZAO) profoundly changes the morphology of the Northern Hemisphere planetary 7 waveguide (PWG). ZAO causes the PWG to

The role of zonal flows in the saturation of multi-scale gyrokinetic turbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Staebler, G. M.; Candy, J.; Howard, N. T.

2016-06-15

The 2D spectrum of the saturated electric potential from gyrokinetic turbulence simulations that include both ion and electron scales (multi-scale) in axisymmetric tokamak geometry is analyzed. The paradigm that the turbulence is saturated when the zonal (axisymmetic) ExB flow shearing rate competes with linear growth is shown to not apply to the electron scale turbulence. Instead, it is the mixing rate by the zonal ExB velocity spectrum with the turbulent distribution function that competes with linear growth. A model of this mechanism is shown to be able to capture the suppression of electron-scale turbulence by ion-scale turbulence and the thresholdmore » for the increase in electron scale turbulence when the ion-scale turbulence is reduced. The model computes the strength of the zonal flow velocity and the saturated potential spectrum from the linear growth rate spectrum. The model for the saturated electric potential spectrum is applied to a quasilinear transport model and shown to accurately reproduce the electron and ion energy fluxes of the non-linear gyrokinetic multi-scale simulations. The zonal flow mixing saturation model is also shown to reproduce the non-linear upshift in the critical temperature gradient caused by zonal flows in ion-scale gyrokinetic simulations.« less

Net Influence of an Internally Generated Guasi-biennial Oscillation on Modelled Stratospheric Climate and Chemistry

NASA Technical Reports Server (NTRS)

Hurwitz, Margaret M.; Oman, Luke David; Newman, Paul A.; Song, InSun

2013-01-01

A Goddard Earth Observing System Chemistry- Climate Model (GEOSCCM) simulation with strong tropical non-orographic gravity wave drag (GWD) is compared to an otherwise identical simulation with near-zero tropical non-orographic GWD. The GEOSCCM generates a quasibiennial oscillation (QBO) zonal wind signal in response to a tropical peak in GWD that resembles the zonal and climatological mean precipitation field. The modelled QBO has a frequency and amplitude that closely resembles observations. As expected, the modelled QBO improves the simulation of tropical zonal winds and enhances tropical and subtropical stratospheric variability. Also, inclusion of the QBO slows the meridional overturning circulation, resulting in a generally older stratospheric mean age of air. Slowing of the overturning circulation, changes in stratospheric temperature and enhanced subtropical mixing all affect the annual mean distributions of ozone, methane and nitrous oxide. Furthermore, the modelled QBO enhances polar stratospheric variability in winter. Because tropical zonal winds are easterly in the simulation without a QBO, there is a relative increase in tropical zonal winds in the simulation with a QBO. Extratropical differences between the simulations with and without a QBO thus reflect the westerly shift in tropical zonal winds: a relative strengthening of the polar stratospheric jet, polar stratospheric cooling and a weak reduction in Arctic lower stratospheric ozone.

Multiple zonal jets and convective heat transport barriers in a quasi-geostrophic model of planetary cores

NASA Astrophysics Data System (ADS)

Guervilly, C.; Cardin, P.

2017-10-01

We study rapidly rotating Boussinesq convection driven by internal heating in a full sphere. We use a numerical model based on the quasi-geostrophic approximation for the velocity field, whereas the temperature field is 3-D. This approximation allows us to perform simulations for Ekman numbers down to 10-8, Prandtl numbers relevant for liquid metals (˜10-1) and Reynolds numbers up to 3 × 104. Persistent zonal flows composed of multiple jets form as a result of the mixing of potential vorticity. For the largest Rayleigh numbers computed, the zonal velocity is larger than the convective velocity despite the presence of boundary friction. The convective structures and the zonal jets widen when the thermal forcing increases. Prograde and retrograde zonal jets are dynamically different: in the prograde jets (which correspond to weak potential vorticity gradients) the convection transports heat efficiently and the mean temperature tends to be homogenized; by contrast, in the cores of the retrograde jets (which correspond to steep gradients of potential vorticity) the dynamics is dominated by the propagation of Rossby waves, resulting in the formation of steep mean temperature gradients and the dominance of conduction in the heat transfer process. Consequently, in quasi-geostrophic systems, the width of the retrograde zonal jets controls the efficiency of the heat transfer.

Future Effects of Southern Hemisphere Stratospheric Zonal Asymmetries on Climate

NASA Astrophysics Data System (ADS)

Stone, K.; Solomon, S.; Kinnison, D. E.; Fyfe, J. C.

2017-12-01

Stratospheric zonal asymmetries in the Southern Hemisphere have been shown to have significant influences on both stratospheric and tropospheric dynamics and climate. Accurate representation of stratospheric ozone in particular is important for realistic simulation of the polar vortex strength and temperature trends. This is therefore also important for stratospheric ozone change's effect on the troposphere, both through modulation of the Southern Annular Mode (SAM), and more localized climate. Here, we characterization the impact of future changes in Southern Hemisphere zonal asymmetry on tropospheric climate, including changes to future tropospheric temperature, and precipitation. The separate impacts of increasing GHGs and ozone recovery on the zonal asymmetric influence on the surface are also investigated. For this purpose, we use a variety of models, including Chemistry Climate Model Initiative simulations from the Community Earth System Model, version 1, with the Whole Atmosphere Community Climate Model (CESM1(WACCM)) and the Australian Community Climate and Earth System Simulator-Chemistry Climate Model (ACCESS-CCM). These models have interactive chemistry and can therefore more accurately represent the zonally asymmetric nature of the stratosphere. The CESM1(WACCM) and ACCESS-CCM models are also compared to simulations from the Canadian Can2ESM model and CESM-Large Ensemble Project (LENS) that have prescribed ozone to further investigate the importance of simulating stratospheric zonal asymmetry.

The role of zonal flows in the saturation of multi-scale gyrokinetic turbulence

DOE PAGES

Staebler, Gary M.; Candy, John; Howard, Nathan T.; ...

2016-06-29

The 2D spectrum of the saturated electric potential from gyrokinetic turbulence simulations that include both ion and electron scales (multi-scale) in axisymmetric tokamak geometry is analyzed. The paradigm that the turbulence is saturated when the zonal (axisymmetic) ExB flow shearing rate competes with linear growth is shown to not apply to the electron scale turbulence. Instead, it is the mixing rate by the zonal ExB velocity spectrum with the turbulent distribution function that competes with linear growth. A model of this mechanism is shown to be able to capture the suppression of electron-scale turbulence by ion-scale turbulence and the thresholdmore » for the increase in electron scale turbulence when the ion-scale turbulence is reduced. The model computes the strength of the zonal flow velocity and the saturated potential spectrum from the linear growth rate spectrum. The model for the saturated electric potential spectrum is applied to a quasilinear transport model and shown to accurately reproduce the electron and ion energy fluxes of the non-linear gyrokinetic multi-scale simulations. Finally, the zonal flow mixing saturation model is also shown to reproduce the non-linear upshift in the critical temperature gradient caused by zonal flows in ionscale gyrokinetic simulations.« less

Relationship between eastern tropical Pacific cooling and recent trends in the Southern Hemisphere zonal-mean circulation

NASA Astrophysics Data System (ADS)

Clem, Kyle R.; Renwick, James A.; McGregor, James

2017-07-01

During 1979-2014, eastern tropical Pacific sea surface temperatures significantly cooled, which has generally been attributed to the transition of the Pacific Decadal Oscillation to its negative phase after 1999. We find the eastern tropical Pacific cooling to be associated with: (1) an intensified Walker Circulation during austral summer (December-February, DJF) and autumn (March-May, MAM); (2) a weakened South Pacific Hadley cell and subtropical jet during MAM; and (3) a strengthening of the circumpolar westerlies between 50 and 60°S during DJF and MAM. Observed cooling in the eastern tropical Pacific is linearly congruent with 60-80 % of the observed Southern Hemisphere positive zonal-mean zonal wind trend between 50 and 60°S during DJF ( 35 % of the interannual variability), and around half of the observed positive zonal-mean zonal wind trend during MAM ( 15 % of the interannual variability). Although previous studies have linked the strengthened DJF and MAM circumpolar westerlies to stratospheric ozone depletion and increasing greenhouse gases, we note that the continuation of the positive SAM trends into the twenty-first century is partially associated with eastern tropical Pacific cooling, especially during MAM when zonal wind anomalies associated with eastern tropical Pacific cooling project strongly onto the observed trends. Outside of DJF and MAM, eastern tropical Pacific cooling is associated with opposing zonal wind anomalies over the Pacific and Indian sectors, which we infer is the reason for the absence of significant positive SAM trends outside of DJF and MAM despite significant eastern tropical Pacific cooling seen during all seasons.

A zonal method for modeling powered-lift aircraft flow fields

NASA Technical Reports Server (NTRS)

Roberts, D. W.

1989-01-01

A zonal method for modeling powered-lift aircraft flow fields is based on the coupling of a three-dimensional Navier-Stokes code to a potential flow code. By minimizing the extent of the viscous Navier-Stokes zones the zonal method can be a cost effective flow analysis tool. The successful coupling of the zonal solutions provides the viscous/inviscid interations that are necessary to achieve convergent and unique overall solutions. The feasibility of coupling the two vastly different codes is demonstrated. The interzone boundaries were overlapped to facilitate the passing of boundary condition information between the codes. Routines were developed to extract the normal velocity boundary conditions for the potential flow zone from the viscous zone solution. Similarly, the velocity vector direction along with the total conditions were obtained from the potential flow solution to provide boundary conditions for the Navier-Stokes solution. Studies were conducted to determine the influence of the overlap of the interzone boundaries and the convergence of the zonal solutions on the convergence of the overall solution. The zonal method was applied to a jet impingement problem to model the suckdown effect that results from the entrainment of the inviscid zone flow by the viscous zone jet. The resultant potential flow solution created a lower pressure on the base of the vehicle which produces the suckdown load. The feasibility of the zonal method was demonstrated. By enhancing the Navier-Stokes code for powered-lift flow fields and optimizing the convergence of the coupled analysis a practical flow analysis tool will result.

Rethinking wave-kinetic theory applied to zonal flows

NASA Astrophysics Data System (ADS)

Parker, Jeffrey

2017-10-01

Over the past two decades, a number of studies have employed a wave-kinetic theory to describe fluctuations interacting with zonal flows. Recent work has uncovered a defect in this wave-kinetic formulation: the system is dominated by the growth of (arbitrarily) small-scale zonal structures. Theoretical calculations of linear growth rates suggest, and nonlinear simulations confirm, that this system leads to the concentration of zonal flow energy in the smallest resolved scales, irrespective of the numerical resolution. This behavior results from the assumption that zonal flows are extremely long wavelength, leading to the neglect of key terms responsible for conservation of enstrophy. A corrected theory, CE2-GO, is presented; it is free of these errors yet preserves the intuitive phase-space mathematical structure. CE2-GO properly conserves enstrophy as well as energy, and yields accurate growth rates of zonal flow. Numerical simulations are shown to be well-behaved and not dependent on box size. The steady-state limit simplifies into an exact wave-kinetic form which offers the promise of deeper insight into the behavior of wavepackets. The CE2-GO theory takes its place in a hierarchy of models as the geometrical-optics reduction of the more complete cumulant-expansion statistical theory CE2. The new theory represents the minimal statistical description, enabling an intuitive phase-space formulation and an accurate description of turbulence-zonal flow dynamics. This work was supported by an NSF Graduate Research Fellowship, a US DOE Fusion Energy Sciences Fellowship, and US DOE Contract Nos. DE-AC52-07NA27344 and DE-AC02-09CH11466.

Protective antifungal activity of essential oils extracted from Buddleja perfoliata and Pelargonium graveolens against fungi isolated from stored grains.

PubMed

Juárez, Z N; Bach, H; Sánchez-Arreola, E; Bach, H; Hernández, L R

2016-05-01

The chemical composition and antifungal activity of essential oils extracted from Buddleja perfoliata and Pelargonium graveolens were analysed to assess their efficacy as a potential alternative to synthetic chemical fungicides to protect stored grain. Essential oils were obtained by hydrodistillation, while GC-MS were used to characterize the components of theses oils. The main components identified from the essential oil of B. perfoliata were cubenol, eudesmol, germacrene D-4-ol and cis-verbenol; whereas (-)-aristolene, β-citronellol and geraniol, were identified in P. graveolens. These essential oils were tested against a panel of fungal strains isolated from stored grains. Toxicity of the essential oils was assessed using two models represented by human-derived macrophages and the brine shrimp assay. Moreover, inflammatory response of the oils was assessed by measuring secretion of the pro-inflammatory cytokines IL-6 and TNF-α using a human-derived macrophage cell line. Results show potent antifungal activity against a collection of fungi, with minimal inhibitory concentrations ranging from 0·3 to 50 μg ml(-1) for both plants. A moderated cytotoxicity was observed, but no inflammatory responses. These oils can be used as an alternative for synthetic chemical fungicides used to protect stored grains. Synthetic chemical fungicides are used to protect stored grains, but their broad use raises concerns about effects on the environment and human health. The impact of the present report is that the use of essential oils is an eco-friendly alternative for fungal control in postharvest grains with a low impact to the environment. © 2016 The Society for Applied Microbiology.

Antifungal mechanism of the combination of Cinnamomum verum and Pelargonium graveolens essential oils with fluconazole against pathogenic Candida strains.

PubMed

Essid, Rym; Hammami, Majdi; Gharbi, Dorra; Karkouch, Ines; Hamouda, Thouraya Ben; Elkahoui, Salem; Limam, Ferid; Tabbene, Olfa

2017-09-01

The present study aimed to investigate the anti-Candida activity of ten essential oils (EOs) and to evaluate their potential synergism with conventional drugs. The effect on secreted aspartic protease (SAP) activity and the mechanism of action were also explored. The antifungal properties of essential oils were investigated using standard micro-broth dilution assay. Only Cinnamomum verum, Thymus capitatus, Syzygium aromaticum, and Pelargonium graveolens exhibited a broad spectrum of activity against a variety of pathogenic Candida strains. Chemical composition of active essential oils was performed by gas chromatography-mass spectrometry (GC-MS). Synergistic effect was observed with the combinations C. verum/fluconazole and P. graveolens/fluconazole, with FIC value 0.37. Investigation of the mechanism of action revealed that C. verum EO reduced the quantity of ergosterol to 83%. A total inhibition was observed for the combination C. verum/fluconazole. However, P. graveolens EO may disturb the permeability barrier of the fungal cell wall. An increase of MIC values of P. graveolens EO and the combination with fluconazole was observed with osmoprotectants (sorbitol and PEG6000). Furthermore, the combination with fluconazole may affect ergosterol biosynthesis and disturb fatty acid homeostasis in C. albicans cells as the quantity of ergosterol and oleic acid was reduced to 52.33 and 72%, respectively. The combination of P. graveolens and C. verum EOs with fluconazole inhibited 78.31 and 64.72% SAP activity, respectively. To our knowledge, this is the first report underlying the mechanism of action and the inhibitory effect of SAP activity of essential oils in synergy with fluconazole. Naturally occurring phytochemicals C. verum and P. graveolens could be effective candidate to enhance the efficacy of fluconazole-based therapy of C. albicans infections.

Stomatal closure of Pelargonium × hortorum in response to soil water deficit is associated with decreased leaf water potential only under rapid soil drying.

PubMed

Boyle, Richard K A; McAinsh, Martin; Dodd, Ian C

2016-01-01

Soil water deficits applied at different rates and for different durations can decrease both stomatal conductance (gs ) and leaf water potential (Ψleaf ). Understanding the physiological mechanisms regulating these responses is important in sustainable irrigation scheduling. Glasshouse-grown, containerized Pelargonium × hortorum BullsEye plants were irrigated either daily at various fractions of plant evapotranspiration (100, 75 and 50% ET) for 20 days or irrigation was withheld for 4 days. Xylem sap was collected and gs and Ψleaf were measured on days 15 and 20, and on days 16-19 for the respective treatments. Xylem sap pH and NO3 (-) and Ca(2+) concentrations did not differ between irrigation treatments. Xylem abscisic acid (ABA) concentrations ([ABA]xyl ) increased within 24 h of irrigation being withheld whilst gs and Ψleaf decreased. Supplying irrigation at a fraction of daily ET produced a similar relationship between [ABA]xyl and gs , but did not change Ψleaf . Treatment differences occurred independently of whether Ψleaf was measured in whole leaves with a pressure chamber, or in the lamina with a thermocouple psychrometer. Plants that were irrigated daily showed lower [ABA]xyl than plants from which irrigation was withheld, even at comparable soil moisture content. This implies that regular re-watering attenuates ABA signaling due to maintenance of soil moisture in the upper soil levels. Crucially, detached leaves supplied with synthetic ABA showed a similar relationship between [ABA]xyl and gs as intact plants, suggesting that stomatal closure of P. hortorum in response to soil water deficit is primarily an ABA-induced response, independent of changes in Ψleaf . © 2015 Scandinavian Plant Physiology Society.

Casparian bands occur in the periderm of Pelargonium hortorum stem and root.

PubMed

Meyer, Chris J; Peterson, Carol A

2011-04-01

Casparian bands are characteristic of the endodermis and exodermis of roots, but also occur infrequently in other plant organs, for example stems and leaves. To date, these structures have not been detected in phellem cells of a periderm. The aim of this study was to determine whether Casparian bands occur in phellem cells using tests that are known to detect Casparian bands in cells that also contain suberin lamellae. Both natural periderm and wound-induced structures were examined in shoots and roots. Using Pelargonium hortorum as a candidate species, the following tests were conducted: (1) staining with berberine and counterstaining with aniline blue, (2) mounting sections in concentrated sulphuric acid and (3) investigating the permeability of the walls with berberine as an apoplastic, fluorescent tracer. (1) Berberine-aniline blue staining revealed a modification in the radial and transverse walls of mature phellem cells in both stems and roots. Three days after wounding through to the cortex of stems, the boundary zone cells (pre-existing, living cells nearest the wound) had developed vividly stained primary walls. By 17 d, staining of mature phellem cells of wound-induced periderm was similar to that of natural periderm. (2) Mature native phellem cells of stems resisted acid digestion. (3) Berberine was excluded from the anticlinal (radial and transverse) walls of mature phellem cells in stems and roots, and from the wound-induced boundary zone. Casparian bands are present in mature phellem cells in both stems and roots of P. hortorum. It is proposed that Casparian bands act to retard water loss and pathogen entry through the primary cell walls of the phellem cells, thus contributing to the main functions of the periderm.

Toxicity of β-citronellol, geraniol and linalool from Pelargonium roseum essential oil against the West Nile and filariasis vector Culex pipiens (Diptera: Culicidae).

PubMed

Tabari, Mohaddeseh Abouhosseini; Youssefi, Mohammad Reza; Esfandiari, Aryan; Benelli, Giovanni

2017-10-01

Insect vectors are responsible for spreading devastating parasites and pathogens. A large number of botanicals have been suggested for eco-friendly control programs against mosquito vectors, and some of them are aromatic plants. Pelargonium roseum, a species belonging to the Geraniaceae family, due to its pleasant rose-like odor may represent a suitable candidate as mosquito repellent and/or larvicide. In this research, we evaluated the toxicity of the essential oil from P. roseum and its major constituents against the West Nile and filariasis vector Culex pipiens. The chemical composition of P. roseum essential oil was analyzed by gas chromatography-mass spectroscopy. Major constituents were citronellol (35.9%), geraniol (18.5%), and linalool (5.72%). The bioactivity of P. roseum essential oil and its three major compounds on larvae and egg rafts of Cx. pipiens was evaluated. The essential oil had a significant toxic effect on larvae and egg rafts of Cx. pipiens, with 50% lethal concentration (LC 50 ) values of 5.49 and 0.45μg/mL, respectively. Major constituents, geraniol, citronellol and linalool resulted in LC 50 values of 6.86, 7.64 and 14.87μg/mL on larvae, and 0.8, 0.67 and 1.27μg/mL on egg rafts. Essential oil and two of its constituents, citronellol and geraniol showed moderate knock-down on Cx. pipiens adults. Overall, the present investigation revealed that the major components of P. roseum and specially the whole essential oil could be helpful in developing novel and safe mosquito control tools and also offer an environmentally safe and cheap tool for reducing Cx. pipiens mosquito populations. Copyright © 2017. Published by Elsevier Ltd.

Inventory of File sref.t03z.pgrb212_SPC.prob_1hrly.grib2

Science.gov Websites

analysis Total Precipitation [prob] prob >0.25 002 cloud base U-GWD 1 hour fcst Zonal Flux of Gravity Precipitation [prob] prob >0.25 007 cloud base U-GWD 2 hour fcst Zonal Flux of Gravity Wave Stress [prob ;0.25 012 cloud base U-GWD 4 hour fcst Zonal Flux of Gravity Wave Stress [prob] prob =1 013 entire

TGLF Recalibration for ITER Standard Case Parameters FY2015: Theory and Simulation Performance Target Final Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Candy, J.

2015-12-01

This work was motivated by the observation, as early as 2008, that GYRO simulations of some ITER operating scenarios exhibited nonlinear zonal-flow generation large enough to effectively quench turbulence inside r /a ~ 0.5. This observation of flow-dominated, low-transport states persisted even as more accurate and comprehensive predictions of ITER profiles were made using the state-of-the-art TGLF transport model. This core stabilization is in stark contrast to GYRO-TGLF comparisons for modern-day tokamaks, for which GYRO and TGLF are typically in very close agreement. So, we began to suspect that TGLF needed to be generalized to include the effect of zonal-flowmore » stabilization in order to be more accurate for the conditions of reactor simulations. While the precise cause of the GYRO-TGLF discrepancy for ITER parameters was not known, it was speculated that closeness to threshold in the absence of driven rotation, as well as electromagnetic stabilization, created conditions more sensitive the self-generated zonal-flow stabilization than in modern tokamaks. Need for nonlinear zonal-flow stabilization: To explore the inclusion of a zonal-flow stabilization mechanism in TGLF, we started with a nominal ITER profile predicted by TGLF, and then performed linear and nonlinear GYRO simulations to characterize the behavior at and slightly above the nominal temperature gradients for finite levels of energy transport. Then, we ran TGLF on these cases to see where the discrepancies were largest. The predicted ITER profiles were indeed near to the TGLF threshold over most of the plasma core in the hybrid discharge studied (weak magnetic shear, q > 1). Scanning temperature gradients above the TGLF power balance values also showed that TGLF overpredicted the electron energy transport in the low-collisionality ITER plasma. At first (in Q3), a model of only the zonal-flow stabilization (Dimits shift) was attempted. Although we were able to construct an ad hoc model of the zonal flows that fit the GYRO simulations, the parameters of the model had to be tuned to each case. A physics basis for the zonal flow model was lacking. Electron energy transport at short wavelength: A secondary issue – the high-k electron energy flux – was initially assumed to be independent of the zonal flow effect. However, detailed studies of the fluctuation spectra from recent multiscale (electron and ion scale) GYRO simulations provided a critical new insight into the role of zonal flows. The multiscale simulations suggested that advection by the zonal flows strongly suppressed electron-scale turbulence. Radial shear of the zonal E×B fluctuation could not compete with the large electron-scale linear growth rate, but the k x-mixing rate of the E×B advection could. This insight led to a preliminary new model for the way zonal flows saturate both electron- and ion-scale turbulence. It was also discovered that the strength of the zonal E×B velocity could be computed from the linear growth rate spectrum. The new saturation model (SAT1), which replaces the original model (SAT0), was fit to the multiscale GYRO simulations as well as the ion-scale GYRO simulations used to calibrate the original SAT0 model. Thus, SAT1 captures the physics of both multiscale electron transport and zonal-flow stabilization. In future work, the SAT1 model will require significant further testing and (expensive) calibration with nonlinear multiscale gyrokinetic simulations over a wider variety of plasma conditions – certainly more than the small set of scans about a single C-Mod L-mode discharge. We believe the SAT1 model holds great promise as a physics-based model of the multiscale turbulent transport in fusion devices. Correction to ITER performance predictions: Finally, the impact of the SAT1model on the ITER hybrid case is mixed. Without the electron-scale contribution to the fluxes, the Dimits shift makes a significant improvement in the predicted fusion power as originally posited. Alas, including the high-k electron transport reduces the improvement, yielding a modest net increase in predicted fusion power compared to the TGLF prediction with the original SAT0 model.« less

Long term variabilities and tendencies of mesospheric lunar semidiurnal tide over Tirunelveli (8.7°N, 77.8°E)

NASA Astrophysics Data System (ADS)

Sathishkumar, S.; Sridharan, S.; Muhammed Kutty, P. V.; Gurubaran, S.

2017-10-01

The medium frequency radar deployed at Tirunelveli (8.7°N, 77.8°E), which is located near the southmost tip of peninsular India, have been providing continuous data from the year 1993 to the year 2012 that helped to study the long term tendencies in the lunar tidal variabilities over this geographic location. In the present paper we present the results of seasonal, interannual and long-term variabilities of lunar semi-diurnal tides in the upper mesosphere over Tirunelveli. The present study also includes comparison with model values. The study shows that the tidal amplitudes are larger in the meridional components of the mesospheric winds than the zonal winds. The seasonal variations of the tides are similar in both the components. The tides show maximum amplitudes of about ∼5 m/s in February/March, secondary maximum amplitudes of about ∼3 m/s in September and minimum amplitudes during summer months (May-August). The observed seasonal variation of the lunar tides do not compare well with Vial and Forbes (1994) model values, though it is consistent with earlier observations. The lunar tidal phase in meridional winds leads that in zonal winds from January to June and from September to November, while the latter leads the former during July/August. The lunar tides show large interannual variability. There are unusual amplitude enhancements in the lunar tide in meridional winds during the winters of 2006 and 2009, when major sudden stratospheric warmings (SSW) occurred at high latitude northern hemisphere, whereas zonal lunar tide does not show any clear association with the SSW. Vertical wavelengths of lunar tides in zonal and meridional wind are in the range of 20-90 km. The vertical wavelengths of lunar tides in both zonal and meridional component are smaller in June and larger in November and December. The monthly mean zonal and meridional winds are subjected to regression analysis to study the tidal response to long-period oscillations, namely, quasi-biennial oscillation (QBO), solar cycle variation and El-nino southern oscillation (ENSO). It is found the lunar tide in both zonal and meridional winds show significant QBO response, whereas zonal tide only shows significant negative response to solar cycle and positive response to ENSO. Besides, zonal tide only shows significant long-term increasing trend.

The Relationship Between the Zonal Mean ITCZ and Regional Precipitation during the mid-Holocene

NASA Astrophysics Data System (ADS)

Niezgoda, K.; Noone, D.; Konecky, B.

2017-12-01

Characteristics of the zonal mean Tropical Rain Belt (TRB, i.e. the ITCZ + the land-based monsoons) are often inferred from individual proxy records of precipitation or other hydroclimatic variables. However, these inferences can be misleading. Here, an isotope-enabled climate model simulation is used to evaluate metrics of the zonal mean ITCZ vs. regional hydrological characteristics during the mid-Holocene (MH, 6 kya). The MH provides a unique perspective on the relationship between the ITCZ and regional hydrology because of large, orbitally-driven shifts in tropical precipitation as well as a critical mass of proxy records. By using a climate model with simulated water isotopes, characteristics of atmospheric circulation and water transport processes can be inferred, and comparison with isotope proxies can be made more directly. We find that estimations of the zonal-mean ITCZ are insufficient for evaluating regional responses of hydrological cycles to forcing changes. For example, one approximation of a 1.5-degree northward shift in the zonal-mean ITCZ position during the MH corresponded well with northward shifts in maximum rainfall in tropical Africa, but did not match southward shifts in the tropical Pacific or longitudinal shifts in the Indian monsoon region. In many regions, the spatial distribution of water vapor isotopes suggests that changes in moisture source and atmospheric circulation were a greater influence on precipitation distribution, intensity, and isotope ratio than the average northward shift in ITCZ latitude. These findings reinforce the idea that using tropical hydrological proxy records to infer zonal-mean characteristics of the ITCZ may be misleading. Rather, tropical proxy records of precipitation, particularly those that record precipitation isotopes, serve as a guideline for regional hydrological changes while model simulations can put them in the context of zonal mean tropical convergence.

Deep Zonal Flow and Time Variation of Jupiter’s Magnetic Field

NASA Astrophysics Data System (ADS)

Cao, Hao; Stevenson, David J.

2017-10-01

All four giant planets in the Solar System feature zonal flows on the order of 100 m/s in the cloud deck, and large-scale intrinsic magnetic fields on the order of 1 Gauss near the surface. The vertical structure of the zonal flows remains obscure. The end-member scenarios are shallow flows confined in the radiative atmosphere and deep flows throughout the entire planet. The electrical conductivity increases rapidly yet smoothly as a function of depth inside Jupiter and Saturn. Deep zonal flows will advect the non-axisymmetric component of the magnetic field, at depth with even modest electrical conductivity, and create time variations in the magnetic field.The observed time variations of the geomagnetic field has been used to derive surface flows of the Earth’s outer core. The same principle applies to Jupiter, however, the connection between the time variation of the magnetic field (dB/dt) and deep zonal flow (Uphi) at Jupiter is not well understood due to strong radial variation of electrical conductivity. Here we perform a quantitative analysis of the connection between dB/dt and Uphi for Jupiter adopting realistic interior electrical conductivity profile, taking the likely presence of alkali metals into account. This provides a tool to translate expected measurement of the time variation of Jupiter’s magnetic field to deep zonal flows. We show that the current upper limit on the dipole drift rate of Jupiter (3 degrees per 20 years) is compatible with 10 m/s zonal flows with < 500 km vertical scale height below 0.972 Rj. We further demonstrate that fast drift of resolved magnetic features (e.g. magnetic spots) at Jupiter is a possibility.

Three-dimensional assembly of tissue-engineered cartilage constructs results in cartilaginous tissue formation without retainment of zonal characteristics.

PubMed

Schuurman, W; Harimulyo, E B; Gawlitta, D; Woodfield, T B F; Dhert, W J A; van Weeren, P R; Malda, J

2016-04-01

Articular cartilage has limited regenerative capabilities. Chondrocytes from different layers of cartilage have specific properties, and regenerative approaches using zonal chondrocytes may yield better replication of the architecture of native cartilage than when using a single cell population. To obtain high seeding efficiency while still mimicking zonal architecture, cell pellets of expanded deep zone and superficial zone equine chondrocytes were seeded and cultured in two layers on poly(ethylene glycol)-terephthalate-poly(butylene terephthalate) (PEGT-PBT) scaffolds. Scaffolds seeded with cell pellets consisting of a 1:1 mixture of both cell sources served as controls. Parallel to this, pellets of superficial or deep zone chondrocytes, and combinations of the two cell populations, were cultured without the scaffold. Pellet cultures of zonal chondrocytes in scaffolds resulted in a high seeding efficiency and abundant cartilaginous tissue formation, containing collagen type II and glycosaminoglycans (GAGs) in all groups, irrespective of the donor (n = 3), zonal population or stratified scaffold-seeding approach used. However, whereas total GAG production was similar, the constructs retained significantly more GAG compared to pellet cultures, in which a high percentage of the produced GAGs were secreted into the culture medium. Immunohistochemistry for zonal markers did not show any differences between the conditions. We conclude that spatially defined pellet culture in 3D scaffolds is associated with high seeding efficiency and supports cartilaginous tissue formation, but did not result in the maintenance or restoration of the original zonal phenotype. The use of pellet-assembled constructs leads to a better retainment of newly produced GAGs than the use of pellet cultures alone. Copyright © 2013 John Wiley & Sons, Ltd.

Detecting Global Hydrological Cycle Intensification in Sea Surface Salinity

NASA Astrophysics Data System (ADS)

Poague, J.; Stine, A.

2016-12-01

Global warming is expected to intensify the global hydrological cycle, but significant regional differences exist in the predicted response. The proposed zonal mean thermodynamic response is enhanced horizontal moisture transport associated with increased saturation vapor pressure, which in turn drives additional net precipitation in the tropics and at high latitudes and additional net evaporation in the subtropics. Sea surface salinity (SSS) anomalies are forced from above by changes in evaporation minus precipitation (E-P) and thus will respond to changes in the global hydrological cycle, opening the possibility of using historical SSS anomalies to diagnose the response of the hydrological cycle to warming. We estimate zonal mean SSS trends in the Atlantic and Pacific ocean basins from 1955-2015 to test whether historical changes in the global hydrological cycle are consistent with a primarily thermodynamic response. Motivated by this observation, we calculate the sensitivity of basin zonal-mean SSS anomalies to sea surface temperature (SST) forcing as a function of timescale to diagnose and estimate the signal-to-noise ratio of the purely thermodynamic signal as a function of timescale. High-frequency variability in SSS anomalies is likely to be influenced by variability in atmospheric circulation, complicating the attribution of the link between basin zonal-mean SSS anomalies and global SST anomalies. We therefore estimate the basin zonal mean SSS anomaly response to the major modes of large-scale dynamic variability. We find a strong correlation between detrended zonal-mean SSS anomalies and the Pacific-North American index (R=0.71,P<0.01) in the Pacific Ocean. We interpret the relationship between zonal mean SSS anomalies and temperature in terms of the relative contribution of thermodynamic and dynamic processes.

Patterns of genetic diversity reveal multiple introductions and recurrent founder effects during range expansion in invasive populations of Geranium carolinianum (Geraniaceae)

PubMed Central

Shirk, R Y; Hamrick, J L; Zhang, C; Qiang, S

2014-01-01

Genetic diversity, and thus the adaptive potential of invasive populations, is largely based on three factors: patterns of genetic diversity in the species' native range, the number and location of introductions and the number of founding individuals per introduction. Specifically, reductions in genetic diversity (‘founder effects') should be stronger for species with low within-population diversity in their native range and few introductions of few individuals to the invasive range. We test these predictions with Geranium carolinianum, a winter annual herb native to North America and invasive in China. We measure the extent of founder effects using allozymes and microsatellites, and ask whether this is consistent with its colonization history and patterns of diversity in the native range. In the native range, genetic diversity is higher and structure is lower than expected based on life history traits. In China, our results provide evidence for multiple introductions near Nanjing, Jiangsu province, with subsequent range expansion to the west and south. Patterns of genetic diversity across China reveal weak founder effects that are driven largely by low-diversity populations at the expansion front, away from the introduction location. This suggests that reduced diversity in China has resulted from successive founder events during range expansion, and that the loss of genetic diversity in the Nanjing area was mitigated by multiple introductions from diverse source populations. This has implications for the future of G. carolinianum in China, as continued gene flow among populations should eventually increase genetic diversity within the more recently founded populations. PMID:24346497

Genetic structuring, dispersal and taxonomy of the high-alpine populations of the Geranium arabicum/kilimandscharicum complex in tropical eastern Africa

PubMed Central

Gizaw, Abel; Tusiime, Felly M.; Masao, Catherine A.; Abdi, Ahmed A.; Hou, Yan; Nemomissa, Sileshi; Brochmann, Christian

2017-01-01

The scattered eastern African high mountains harbor a renowned and highly endemic flora, but the taxonomy and phylogeographic history of many plant groups are still insufficiently known. The high-alpine populations of the Geranium arabicum/kilimandscharicum complex present intricate morphological variation and have recently been suggested to comprise two new endemic taxa. Here we aim to contribute to a clarification of the taxonomy of these populations by analyzing genetic (AFLP) variation in range-wide high-alpine samples, and we address whether hybridization has contributed to taxonomic problems. We identified only two genetic groups. One corresponded to G. kilimandscharicum, which has been reported as exclusively high-alpine and confined to the eastern Rift mountains in East Africa. The other corresponded to G. arabicum, reported from lower altitudes on the same mountains as well as from a wide altitudinal span in Ethiopia and on the western Rift mountains in East Africa. The four populations analyzed of a recently described species from the Bale Mts in Ethiopia were admixed, indicating that they result from recent long-distance dispersal of G. kilimandscharicum from East Africa followed by hybridization with local G. arabicum in naturally disturbed habitats. Some admixture between the two genetic groups was also inferred on other mountains, supporting earlier suggestions of introgression based on morphology. We did not find support for recognition of the recently suggested new subspecies of G. arabicum in Ethiopia. Interestingly, the high-alpine G. kilimandscharicum lacked clear geographic structuring, suggesting a recent history of colonization of the different mountains or extensive intermountain gene flow. PMID:28552970

A Convective Vorticity Vector Associated With Tropical Convection: A 2D Cloud-Resolving Modeling Study

NASA Technical Reports Server (NTRS)

Gao, Shou-Ting; Ping, Fan; Li, Xiao-Fan; Tao, Wei-Kuo

2004-01-01

Although dry/moist potential vorticity is a useful physical quantity for meteorological analysis, it cannot be applied to the analysis of 2D simulations. A convective vorticity vector (CVV) is introduced in this study to analyze 2D cloud-resolving simulation data associated with 2D tropical convection. The cloud model is forced by the vertical velocity, zonal wind, horizontal advection, and sea surface temperature obtained from the TOGA COARE, and is integrated for a selected 10-day period. The CVV has zonal and vertical components in the 2D x-z frame. Analysis of zonally-averaged and mass-integrated quantities shows that the correlation coefficient between the vertical component of the CVV and the sum of the cloud hydrometeor mixing ratios is 0.81, whereas the correlation coefficient between the zonal component and the sum of the mixing ratios is only 0.18. This indicates that the vertical component of the CVV is closely associated with tropical convection. The tendency equation for the vertical component of the CVV is derived and the zonally-averaged and mass-integrated tendency budgets are analyzed. The tendency of the vertical component of the CVV is determined by the interaction between the vorticity and the zonal gradient of cloud heating. The results demonstrate that the vertical component of the CVV is a cloud-linked parameter and can be used to study tropical convection.

Amplification of warming due to intensification of zonal circulation in the mid-latitudes

NASA Astrophysics Data System (ADS)

Alekseev, Genrikh; Ivanov, Nikolai; Kharlanenkova, Natalia; Kuzmina, Svetlana

2015-04-01

We propose a new index to evaluate the impact of atmospheric zonal transport oscillations on inter-annual variability and trends of average air temperature in mid-latitudes, Northern Hemisphere and globe. A simple model of mid-latitude channel "ocean-land-atmosphere" was used to produce the analytic relationship between the zonal circulation and the land-ocean temperature contrast which was used as a basis for index. An inverse relationship was found between indexes and average mid-latitude, hemisphere and global temperatures during the cold half of year and opposite one in summer. These relationships keep under 400 mb height. In winter relationship describes up to 70, 50 and 40 % of surface air temperature inter-annual variability of these averages, respectively. The contribution of zonal circulation to the increase in the average surface air temperature during warming period 1969-2008 reaches 75% in the mid-latitudes and 40% in the Northern Hemisphere. Proposed mid-latitude index correlates negatively with surface air temperature in the Arctic except summer. ECHAM4 projections with the A1B scenario show that increase of zonal circulation defines more than 74% of the warming in the Northern Hemisphere for 2001-2100. Our analysis confirms that the proposed index is an effective indicator of the climate change caused by variations of the zonal circulation that arise due to anthropogenic and/or natural global forcing mechanisms.

Impact of Stratospheric Ozone Zonal Asymmetries on the Tropospheric Circulation

NASA Technical Reports Server (NTRS)

Tweedy, Olga; Waugh, Darryn; Li, Feng; Oman, Luke

2015-01-01

The depletion and recovery of Antarctic ozone plays a major role in changes of Southern Hemisphere (SH) tropospheric climate. Recent studies indicate that the lack of polar ozone asymmetries in chemistry climate models (CCM) leads to a weaker and warmer Antarctic vortex, and smaller trends in the tropospheric mid-latitude jet and the surface pressure. However, the tropospheric response to ozone asymmetries is not well understood. In this study we report on a series of integrations of the Goddard Earth Observing System Chemistry Climate Model (GEOS CCM) to further examine the effect of zonal asymmetries on the state of the stratosphere and troposphere. Integrations with the full, interactive stratospheric chemistry are compared against identical simulations using the same CCM except that (1) the monthly mean zonal mean stratospheric ozone from first simulation is prescribed and (2) ozone is relaxed to the monthly mean zonal mean ozone on a three day time scale. To analyze the tropospheric response to ozone asymmetries, we examine trends and quantify the differences in temperatures, zonal wind and surface pressure among the integrations.

Eastern Tropical Pacific Precipitation Response to Zonal SPCZ events

NASA Astrophysics Data System (ADS)

Durán-Quesada, A. M.; Lintner, B. R.

2014-12-01

Extreme El Niño events and warming conditions in the eastern tropical Pacific have been linked to pronounced spatial displacements of the South Pacific Convergence Zone known as "zonal SPCZ" events.. Using a global dataset of Lagrangian back trajectories computed with the FLEXPART model for the period 1980-2013, comprehensive analysis of the 3D circulation characteristics associated with the SPCZ is undertaken. Ten days history of along-trajectory specific humidity, potential vorticity and temperature are reconstructed for zonal SPCZ events as well as other states,, with differences related to El Niño intensity and development stage as well as the state of the Western Hemisphere Warm Pool. How zonal events influence precipitation over the Eastern Tropical Pacific is examined using back trajectories, reanalysis, TRMM precipitation, and additional satellite derived cloud information. It is found that SPCZ displacements are associated with enhanced convection over the Eastern Tropical Pacific in good agreement with prior work. The connection between intensification of precipitation over the eastern Tropical Pacific during zonal events and suppression of rainfall over the Maritime continent is also described.

A model of the saturation of coupled electron and ion scale gyrokinetic turbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Staebler, Gary M.; Howard, Nathan T.; Candy, Jeffrey M.

A new paradigm of zonal flow mixing as the mechanism by which zonal E × B fluctuations impact the saturation of gyrokinetic turbulence has recently been deduced from the nonlinear 2D spectrum of electric potential fluctuations in gyrokinetic simulations. These state of the art simulations span the physical scales of both ion and electron turbulence. It was found that the zonal flow mixing rate, rather than zonal flow shearing rate, competes with linear growth at both electron and ion scales. A model for saturation of the turbulence by the zonal flow mixing was developed and applied to the quasilinear trappedmore » gyro-Landau fluid transport model (TGLF). The first validation tests of the new saturation model are reported in this paper with data from L-mode and high-β p regime discharges from the DIII-D tokamak. Lastly, the shortfall in the predicted L-mode edge electron energy transport is improved with the new saturation model for these discharges but additional multiscale simulations are required in order to verify the safety factor and collisionality dependencies found in the modeling.« less

A model of the saturation of coupled electron and ion scale gyrokinetic turbulence

DOE PAGES

Staebler, Gary M.; Howard, Nathan T.; Candy, Jeffrey M.; ...

2017-05-09

A new paradigm of zonal flow mixing as the mechanism by which zonal E × B fluctuations impact the saturation of gyrokinetic turbulence has recently been deduced from the nonlinear 2D spectrum of electric potential fluctuations in gyrokinetic simulations. These state of the art simulations span the physical scales of both ion and electron turbulence. It was found that the zonal flow mixing rate, rather than zonal flow shearing rate, competes with linear growth at both electron and ion scales. A model for saturation of the turbulence by the zonal flow mixing was developed and applied to the quasilinear trappedmore » gyro-Landau fluid transport model (TGLF). The first validation tests of the new saturation model are reported in this paper with data from L-mode and high-β p regime discharges from the DIII-D tokamak. Lastly, the shortfall in the predicted L-mode edge electron energy transport is improved with the new saturation model for these discharges but additional multiscale simulations are required in order to verify the safety factor and collisionality dependencies found in the modeling.« less

Conservative zonal schemes for patched grids in 2 and 3 dimensions

NASA Technical Reports Server (NTRS)

Hessenius, Kristin A.

1987-01-01

The computation of flow over complex geometries, such as realistic aircraft configurations, poses difficult grid generation problems for computational aerodynamicists. The creation of a traditional, single-module grid of acceptable quality about an entire configuration may be impossible even with the most sophisticated of grid generation techniques. A zonal approach, wherein the flow field is partitioned into several regions within which grids are independently generated, is a practical alternative for treating complicated geometries. This technique not only alleviates the problems of discretizing a complex region, but also facilitates a block processing approach to computation thereby circumventing computer memory limitations. The use of such a zonal scheme, however, requires the development of an interfacing procedure that ensures a stable, accurate, and conservative calculation for the transfer of information across the zonal borders.

Zonal flow generation and its feedback on turbulence production in drift wave turbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pushkarev, Andrey V.; Bos, Wouter J. T.; Nazarenko, Sergey V.

2013-04-15

Plasma turbulence described by the Hasegawa-Wakatani equations is simulated numerically for different models and values of the adiabaticity parameter C. It is found that for low values of C turbulence remains isotropic, zonal flows are not generated and there is no suppression of the meridional drift waves and particle transport. For high values of C, turbulence evolves towards highly anisotropic states with a dominant contribution of the zonal sector to the kinetic energy. This anisotropic flow leads to a decrease of turbulence production in the meridional sector and limits the particle transport across the mean isopycnal surfaces. This behavior allowsmore » to consider the Hasegawa-Wakatani equations a minimal PDE model, which contains the drift-wave/zonal-flow feedback loop mechanism.« less

Jovian vortices by simulated annealing

NASA Astrophysics Data System (ADS)

Morrison, P. J.; Flierl, G. R.; Swaminathan, R. V.

2017-11-01

We explore the conditions required for isolated vortices to exist in sheared zonal flows and the stability of the underlying zonal winds. This is done using the standard 2-layer quasigeostrophic model with the lower layer depth becoming infinite; however, this model differs from the usual layer model because the lower layer is not assumed to be motionless but has a steady configuration of alternating zonal flows. Steady state vortices are obtained by a simulated annealing computational method introduced in, generalized and applied in in fluid flow, and used in the context of magnetohydrodynamics in. Various cases of vortices with a constant potential vorticity anomaly atop zonal winds and the stability of the underlying winds are considered using a mix of computational and analytical techniques. U.S. Department of Energy Contract DE-FG05-80ET-53088.

Ion Layer Separation and Equilibrium Zonal Winds in Midlatitude Sporadic E

NASA Technical Reports Server (NTRS)

Earle, G. D.; Kane, T. J.; Pfaff, R. F.; Bounds, S. R.

2000-01-01

In-situ observations of a moderately strong mid-latitude sporadic-E layer show a separation in altitude between distinct sublayers composed of Fe(+), Mg(+), and NO(+). From these observations it is possible to estimate the zonal wind field consistent with diffusive equilibrium near the altitude of the layer. The amplitude of the zonal wind necessary to sustain the layer against diffusive effects is less than 10 meters per second, and the vertical wavelength is less than 10 km.

On the Longitudinal Morphology of Zonal Irregularity Drift Measured using Networks of GPS Scintillation Monitors

NASA Astrophysics Data System (ADS)

Carrano, C. S.; Groves, K. M.; Valladares, C. E.; Delay, S. H.

2014-12-01

A complete characterization of field-aligned ionospheric irregularities responsible for the scintillation of satellite signals includes not only their spectral properties (power spectral strength, spectral index, anisotropy ratio, and outer-scale) but also their horizontal drift velocity. From a system impacts perspective, the horizontal drift velocity is important in that it dictates the rate of signal fading and also, to an extent, the level of phase fluctuations encountered by the receiver. From a physics perspective, studying the longitudinal morphology of zonal irregularity may lead to an improved understanding of the F region dynamo and regional electrodynamics at low latitudes. The irregularity drift at low latitudes is predominantly zonal and is most commonly measured by cross-correlating observations of satellite signals made by a pair of closely-spaced antennas. The AFRL-SCINDA network operates a small number of VHF spaced-antenna systems at low latitude stations for this purpose. A far greater number of GPS scintillation monitors are operated by AFRL-SCINDA (25-30) and the Low Latitude Ionospheric Sensor Network (35-50), but the receivers are situated too far apart to monitor the drift using cross-correlation techniques. In this paper, we present an alternative approach that leverages the weak scatter scintillation theory (Rino, Radio Sci., 1979) to infer the zonal irregularity drift from single-station GPS measurements of S4, sigma-phi, and the propagation geometry alone. Unlike the spaced-receiver technique, this technique requires assumptions for the height of the scattering layer (which introduces a bias in the drift estimates) and the spectral index of the irregularities (which affects the spread of the drift estimates about the mean). Nevertheless, theory and experiment show that the ratio of sigma-phi to S4 is less sensitive to these parameters than it is to the zonal drift, and hence the zonal drift can be estimated with reasonable accuracy. In this talk, we first validate the technique using spaced VHF-antenna measurements of zonal irregularity drift from the AFRL-SCINDA network. Next, we discuss preliminary results from our investigation into the longitudinal morphology of zonal irregularity drift using the AFRL-SCINDA and LISN networks of GPS scintillation monitors.

Zonal structure and variability of the Western Pacific dynamic warm pool edge in CMIP5

NASA Astrophysics Data System (ADS)

Brown, Jaclyn N.; Langlais, Clothilde; Maes, Christophe

2014-06-01

The equatorial edge of the Western Pacific Warm Pool is operationally identified by one isotherm ranging between 28° and 29 °C, chosen to align with the interannual variability of strong zonal salinity gradients and the convergence of zonal ocean currents. The simulation of this edge is examined in 19 models from the World Climate Research Program Coupled Model Intercomparison Project Phase 5 (CMIP5), over the historical period from 1950 to 2000. The dynamic warm pool edge (DWPE), where the zonal currents converge, is difficult to determine from limited observations and biased models. A new analysis technique is introduced where a proxy for DWPE is determined by the isotherm that most closely correlates with the movements of the strong salinity gradient. It can therefore be a different isotherm in each model. The DWPE is simulated much closer to observations than if a direct temperature-only comparison is made. Aspects of the DWPE remain difficult for coupled models to simulate including the mean longitude, the interannual excursions, and the zonal convergence of ocean currents. Some models have only very weak salinity gradients trapped to the western side of the basin making it difficult to even identify a DWPE. The model's DWPE are generally 1-2 °C cooler than observed. In line with theory, the magnitude of the zonal migrations of the DWPE are strongly related to the amplitudes of the Nino3.4 SST index. Nevertheless, a better simulation of the mean location of the DWPE does not necessarily improve the amplitude of a model's ENSO. It is also found that in a few models (CSIROMk3.6, inmcm and inmcm4-esm) the warm pool displacements result from a net heating or cooling rather than a zonal advection of warm water. The simulation of the DWPE has implications for ENSO dynamics when considering ENSO paradigms such as the delayed action oscillator mechanism, the Advective-Reflective oscillator, and the zonal-advective feedback. These are also discussed in the context of the CMIP5 simulations.

Observations of planetary mixed Rossby-gravity waves in the upper stratosphere

NASA Technical Reports Server (NTRS)

Randel, William J.; Boville, Byron A.; Gille, John C.

1990-01-01

Observational evidence is presented for planetary scale (zonal wave number 1-2) mixed Rossby-gravity (MRG) waves in the equatorial upper stratosphere (35-50 km). These waves are detected in LIMS measurements as coherently propagating temperature maxima of amplitude 0.1-0.3 K, which are antisymmetric (out of phase) about the equator, centered near 10-15 deg north and south latitude. These features have vertical wavelengths of order 10-15 km, periods near 2-3 days, and zonal phase velocities close to 200 m/s. Both eastward and westward propagating waves are found, and the observed vertical wavelengths and meridional structures are in good agreement with the MRG dispersion relation. Theoretical estimates of the zonal accelerations attributable to these waves suggest they do not contribute substantially to the zonal momentum balance in the middle atmosphere.

Nonlinear saturation of the slab ITG instability and zonal flow generation with fully kinetic ions

NASA Astrophysics Data System (ADS)

Miecnikowski, Matthew T.; Sturdevant, Benjamin J.; Chen, Yang; Parker, Scott E.

2018-05-01

Fully kinetic turbulence models are of interest for their potential to validate or replace gyrokinetic models in plasma regimes where the gyrokinetic expansion parameters are marginal. Here, we demonstrate fully kinetic ion capability by simulating the growth and nonlinear saturation of the ion-temperature-gradient instability in shearless slab geometry assuming adiabatic electrons and including zonal flow dynamics. The ion trajectories are integrated using the Lorentz force, and the cyclotron motion is fully resolved. Linear growth and nonlinear saturation characteristics show excellent agreement with analogous gyrokinetic simulations across a wide range of parameters. The fully kinetic simulation accurately reproduces the nonlinearly generated zonal flow. This work demonstrates nonlinear capability, resolution of weak gradient drive, and zonal flow physics, which are critical aspects of modeling plasma turbulence with full ion dynamics.

Zonally averaged model of dynamics, chemistry and radiation for the atmosphere

NASA Technical Reports Server (NTRS)

Tung, K. K.

1985-01-01

A nongeostrophic theory of zonally averaged circulation is formulated using the nonlinear primitive equations on a sphere, taking advantage of the more direct relationship between the mean meridional circulation and diabatic heating rate which is available in isentropic coordinates. Possible differences between results of nongeostrophic theory and the commonly used geostrophic formulation are discussed concerning: (1) the role of eddy forcing of the diabatic circulation, and (2) the nonlinear nearly inviscid limit vs the geostrophic limit. Problems associated with the traditional Rossby number scaling in quasi-geostrophic formulations are pointed out and an alternate, more general scaling based on the smallness of mean meridional to zonal velocities for a rotating planet is suggested. Such a scaling recovers the geostrophic balanced wind relationship for the mean zonal flow but reveals that the mean meridional velocity is in general ageostrophic.

How pattern is selected in drift wave turbulence: Role of parallel flow shear

NASA Astrophysics Data System (ADS)

Kosuga, Y.

2017-12-01

The role of parallel shear flow in the pattern selection problem in drift wave turbulence is discussed. Patterns of interest here are E × B convective cells, which include poloidally symmetric zonal flows and radially elongated streamers. The competition between zonal flow formation and streamer formation is analyzed in the context of modulational instability analysis, with the parallel flow shear as a parameter. For drift wave turbulence with k⊥ρs ≲ O (1 ) and without parallel flow coupling, zonal flows are preferred structures. While increasing the magnitude of parallel flow shear, streamer growth overcomes zonal flow growth. This is because the self-focusing effect of the modulational instability becomes more effective for streamers through density and parallel velocity modulation. As a consequence, the bursty release of free energy may result as the parallel flow shear increases.

Validity of the "Laplace Swindle" in Calculation of Giant-Planet Gravity Fields

NASA Astrophysics Data System (ADS)

Hubbard, William B.

2014-11-01

Jupiter and Saturn have large rotation-induced distortions, providing an opportunity to constrain interior structure via precise measurement of external gravity. Anticipated high-precision gravity measurements close to the surfaces of Jupiter (Juno spacecraft) and Saturn (Cassini spacecraft), possibly detecting zonal harmonics to J10 and beyond, will place unprecedented requirements on gravitational modeling via the theory of figures (TOF). It is not widely appreciated that the traditional TOF employs a formally nonconvergent expansion attributed to Laplace. This suspect expansion is intimately related to the standard zonal harmonic (J-coefficient) expansion of the external gravity potential. It can be shown (Hubbard, Schubert, Kong, and Zhang: Icarus, in press) that both Jupiter and Saturn are in the domain where Laplace's "swindle" works exactly, or at least as well as necessary. More highly-distorted objects such as rapidly spinning asteroids may not be in this domain, however. I present a numerical test for the validity and precision of TOF via polar "audit points". I extend the audit-point test to objects rotating differentially on cylinders, obtaining zonal harmonics to J20 and beyond. Models with only low-order differential rotation do not exhibit dramatic effects in the shape of the zonal harmonic spectrum. However, a model with Jupiter-like zonal winds exhibits a break in the zonal harmonic spectrum above about J10, and generally follows the more shallow Kaula power rule at higher orders. This confirms an earlier result obtained by a different method (Hubbard: Icarus 137, 357-359, 1999).

GRAVOTURBULENT PLANETESIMAL FORMATION: THE POSITIVE EFFECT OF LONG-LIVED ZONAL FLOWS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dittrich, K.; Klahr, H.; Johansen, A., E-mail: dittrich@mpia.de

2013-02-15

Recent numerical simulations have shown long-lived axisymmetric sub- and super-Keplerian flows in protoplanetary disks. These zonal flows are found in local as well as global simulations of disks unstable to the magnetorotational instability. This paper covers our study of the strength and lifetime of zonal flows and the resulting long-lived gas over- and underdensities as functions of the azimuthal and radial size of the local shearing box. We further investigate dust particle concentrations without feedback on the gas and without self-gravity. The strength and lifetime of zonal flows increase with the radial extent of the simulation box, but decrease withmore » the azimuthal box size. Our simulations support earlier results that zonal flows have a natural radial length scale of 5-7 gas pressure scale heights. This is the first study that combines three-dimensional MHD simulations of zonal flows and dust particles feeling the gas pressure. The pressure bumps trap particles with St = 1 very efficiently. We show that St = 0.1 particles (of some centimeters in size if at 5 AU in a minimum mass solar nebula) reach a hundred-fold higher density than initially. This opens the path for particles of St = 0.1 and dust-to-gas ratio of 0.01 or for particles of St {>=} 0.5 and dust-to-gas ratio 10{sup -4} to still reach densities that potentially trigger the streaming instability and thus gravoturbulent formation of planetesimals.« less

Indian Ocean zonal mode activity in 20th century observations and simulations

NASA Astrophysics Data System (ADS)

Sendelbeck, Anja; Mölg, Thomas

2016-04-01

The Indian Ocean zonal mode (IOZM) is a coupled ocean-atmosphere system with anomalous cooling in the east, warming in the west and easterly wind anomalies, resulting in a complete reversal of the climatological zonal sea surface temperature (SST) gradient. The IOZM has a strong influence on East African climate by causing anomalously strong October - December (OND) precipitation. Using observational data and historical CMIP5 (Coupled Model Intercomparison Project phase 5) model output, the September - November (SON) dipole mode index (DMI), OND East African precipitation and SON zonal wind index (ZWI) are calculated. We pay particular attention to detrending SSTs for calculating the DMI, which seems to have been neglected in some published research. The ZWI is defined as the area-averaged zonal wind component at 850 hPa over the central Indian Ocean. Regression analysis is used to evaluate the models' capability to represent the IOZM and its impact on east African climate between 1948 and 2005. Simple correlations are calculated between SST, zonal wind and precipitation to show their interdependence. High correlation in models implies a good representation of the influence of IOZM on East African climate variability and our goal is to detect the models with the highest correlation coefficients. In future research, these model data might be used to investigate the impact of IOZM on the East African climate variability in the late 20's century with regard to anthropogenic causes and internal variability.

Equinoctial asymmetry in the zonal distribution of scintillation as observed by GPS receivers in Indonesia

NASA Astrophysics Data System (ADS)

Abadi, P.; Otsuka, Y.; Shiokawa, K.; Husin, A.; Liu, Huixin; Saito, S.

2017-08-01

We investigate the azimuthal distribution of amplitude scintillation observed by Global Positioning System (GPS) ground receivers at Pontianak (0.0°S, 109.3°E; magnetic latitude: 9.8°S) and Bandung (6.9°S, 107.6°E; magnetic latitude: 16.7°S) in Indonesia in March and September from 2011 to 2015. The scintillation is found to occur more to the west than to the east in March at both stations, whereas no such zonal difference is found in September. We also analyze the zonal scintillation drift as estimated using three closely spaced single-frequency GPS receivers at Kototabang (0.2°S, 100.3°E; magnetic latitude: 9.9°S) in Indonesia during 2003-2015 and the zonal thermospheric neutral wind as measured by the CHAMP satellite at longitudes of 90°-120°E during 2001-2008. We find that the velocities of both the zonal scintillation drift and the neutral wind decrease with increasing latitudes. Interestingly, the latitudinal gradients of both the zonal scintillation drift and the neutral wind are steeper in March than in September. These steeper March gradients may be responsible for the increased westward altitudinal and latitudinal tilting of plasma bubbles in March. This equinoctial asymmetry could be responsible for the observed westward bias in scintillation in March, because the scintillation is more likely to occur when radio waves pass through longer lengths of plasma irregularities in the plasma bubbles.

Stratospheric ozone variations in the equatorial region as seen in Stratiospheric Aerosol and Gas Experiment data

NASA Technical Reports Server (NTRS)

Shiotani, Masato; Hasebe, Fumio

1994-01-01

An analysis is made of equatorial ozone variations for 5 years, 1984-1989, using the ozone profile data derived from the Stratospheric Aerosol and Gas Experiment II (SAGE II) instrument. Attention is focused on the annual cycle and also on interannual variability, particularly the quasi-biennial oscillation (QBO) and El Nino-Southern Oscillation (ENSO) variations in the lower stratosphere, where the largest contribution to total column ozone takes place. The annual variation in zonal mean total ozone around the equator is composed of symmetric and asymmetric modes with respect to the equator, with maximum contributions being around 19 km for the symmetric mode and around 25 km for the asymmetric mode. The persistent zonal wavenumber 1 structure observed by the total ozone mapping spectrometer over the equator is almost missing in the SAGE-derived column amounts integrated in the stratosphere, suggesting a significant contribution from tropospheric ozone. Interannual variations in the equatorial ozone are dominated by the QBO above 20 km and the ENSO-related variation below 20 km. The ozone QBO is characterized by zonally uniform phase changes in association with the zonal wind QBO in the equatorial lower stratosphere. The ENSO-related ozone variation consists of both the east-west vacillation and the zonally uniform phase variation. During the El Nino event, the east-west contrast with positive (negative) deviations in the eastern (western) hemisphere is conspicuous, while the decreasing tendency of the zonal mean values is maximum at the same time.

Detecting concentration differences in aromatic oils.

PubMed

Morris, Neil

2002-12-01

200 University of Wolverhampton undergraduates rank-ordered samples of aromatic oils commonly used in complementary medicine in terms of their concentration in the air above an oil-soaked cotton ball. Each participant was assigned the task of discriminating between 5 microl, 10 microl, and 20 microl of oil absorbed onto cotton balls. 25 participants assessed each oil, and 8 oils were used. Cardamom, Rosemary, and Ylang Ylang were highly discriminable; however, discrimination of different concentrations of Chamomile, Cyprus, Geranium, Jasmine, and Lavender did not significantly differ from chance. These data provide useful indices for choosing aromatic oils for research purposes.

Rubens Peale's spectacles: an optical illusion?

PubMed

Follensbee, B J

1997-01-01

The painting Rubens Peale with a Geranium (1801), by Rembrandt Peale, has earned a reputation as a masterpiece of early American portraiture. In recent years the painting has also been the source of controversy, because Rubens was depicted with two pairs of eyeglasses at a time when most people would not have been portrayed with spectacles at all. Scholars of American art history and ophthalmology have studied the painting and have promoted various theories for this peculiarity. A combined study of the painting, historical documentation, and optical effects in the painting, however, sheds new light on the answer to this mystery.

Self-generated zonal flows in the plasma turbulence driven by trapped-ion and trapped-electron instabilities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Drouot, T.; Gravier, E.; Reveille, T.

This paper presents a study of zonal flows generated by trapped-electron mode and trapped-ion mode micro turbulence as a function of two plasma parameters—banana width and electron temperature. For this purpose, a gyrokinetic code considering only trapped particles is used. First, an analytical equation giving the predicted level of zonal flows is derived from the quasi-neutrality equation of our model, as a function of the density fluctuation levels and the banana widths. Then, the influence of the banana width on the number of zonal flows occurring in the system is studied using the gyrokinetic code. Finally, the impact of themore » temperature ratio T{sub e}/T{sub i} on the reduction of zonal flows is shown and a close link is highlighted between reduction and different gyro-and-bounce-average ion and electron density fluctuation levels. This reduction is found to be due to the amplitudes of gyro-and-bounce-average density perturbations n{sub e} and n{sub i} gradually becoming closer, which is in agreement with the analytical results given by the quasi-neutrality equation.« less

On the Nocturnal Downward and Westward Equatorial Ionospheric Plasma Drifts During the 17 March 2015 Geomagnetic Storm

NASA Astrophysics Data System (ADS)

Bagiya, Mala S.; Vichare, Geeta; Sinha, A. K.; Sripathi, S.

2018-02-01

During quiet period, the nocturnal equatorial ionospheric plasma drifts eastward in the zonal direction and downward in the vertical direction. This quiet time drift pattern could be understood through dynamo processes in the nighttime equatorial ionosphere. The present case study reports the nocturnal simultaneous occurrence of the vertically downward and zonally westward plasma drifts over the Indian latitudes during the geomagnetic storm of 17 March 2015. After 17:00 UT ( 22:10 local time), the vertical plasma drift became downward and coincided with the westward zonal drift, a rarely observed feature of low latitude plasma drifts. The vertical drift turned upward after 18:00 UT, while the zonal drift became eastward. We mainly emphasize here the distinct bipolar type variations of vertical and zonal plasma drifts observed around 18:00 UT. We explain the vertical plasma drift in terms of the competing effects between the storm time prompt penetration and disturbance dynamo electric fields. Whereas, the westward drift is attributed to the storm time local electrodynamical changes mainly through the disturbance dynamo field in addition to the vertical Pedersen current arising from the spatial (longitudinal) gradient of the field aligned Pedersen conductivity.

Impact of resonant magnetic perturbations on nonlinearly driven modes in drift-wave turbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leconte, M.; Diamond, P. H.; CMTFO and CASS, UCSD, California 92093

2012-05-15

In this work, we study the effects of resonant magnetic perturbations (RMPs) on turbulence, flows, and confinement in the framework of resistive drift wave turbulence. We extend the Hasegawa-Wakatani model to include RMP fields. The effect of the RMPs is to induce a linear coupling between the zonal electric field and the zonal density gradient, which drives the system to a state of electron radial force balance for large ({delta}B{sub r}/B{sub 0}). Both the vorticity flux (Reynolds stress) and particle flux are modulated. We derive an extended predator prey model which couples zonal potential and density dynamics to the evolutionmore » of turbulence intensity. This model has both turbulence drive and RMP amplitude as control parameters and predicts a novel type of transport bifurcation in the presence of RMPs. We find states that are similar to the ZF-dominated state of the standard predator-prey model, but for which the power threshold is now a function of the RMP strength. For small RMP amplitude, the energy of zonal flows decreases and the turbulence energy increases with ({delta}B{sub r}/B{sub 0}), corresponding to a damping of zonal flows.« less

Transonic Navier-Stokes wing solutions using a zonal approach. Part 2: High angle-of-attack simulation

NASA Technical Reports Server (NTRS)

Chaderjian, N. M.

1986-01-01

A computer code is under development whereby the thin-layer Reynolds-averaged Navier-Stokes equations are to be applied to realistic fighter-aircraft configurations. This transonic Navier-Stokes code (TNS) utilizes a zonal approach in order to treat complex geometries and satisfy in-core computer memory constraints. The zonal approach has been applied to isolated wing geometries in order to facilitate code development. Part 1 of this paper addresses the TNS finite-difference algorithm, zonal methodology, and code validation with experimental data. Part 2 of this paper addresses some numerical issues such as code robustness, efficiency, and accuracy at high angles of attack. Special free-stream-preserving metrics proved an effective way to treat H-mesh singularities over a large range of severe flow conditions, including strong leading-edge flow gradients, massive shock-induced separation, and stall. Furthermore, lift and drag coefficients have been computed for a wing up through CLmax. Numerical oil flow patterns and particle trajectories are presented both for subcritical and transonic flow. These flow simulations are rich with complex separated flow physics and demonstrate the efficiency and robustness of the zonal approach.

An Assessment of Research Gaps Related to Deep Water Wellbore Integrity

NASA Astrophysics Data System (ADS)

Tkach, M. K.; Radonjic, M.; Kutchko, B. G.

2017-12-01

In order for a deep-water wellbore to uphold its integrity under high pressure - high temperature conditions, the wellbore must possess complete zonal isolation while surrounded in an extreme environment. Highly variable temperature and pressure ranges, shallow flow zones, as well as potentially corrosive fluids and gasses all present unique challenges to the job of the cement which maintains that zonal isolation. As such, alternative options to mainstream choices often present themselves as attractive avenues of discovery. As it is of utmost importance to maintain structural integrity under HPHT conditions, cement slurries are pumped downhole to provide zonal isolation and structural support to offshore wells. The wellbore system potentially faces a variety of temperature and pressure fluctuations from the immediate onset. These fluctuations may affect the hydration properties of the cement. It is also important to consider the chemical interactions that the cement may have at the rock-cement interface where potential degradation or annulus gaps may occur further risking a decrease in zonal isolation. This presentation intends to review some of the important issues regarding zonal isolation in HPHT conditions and to highlight critical knowledge gaps in order to generate important research questions.

Nongeostrophic theory of zonally averaged circulation. I - Formulation

NASA Technical Reports Server (NTRS)

Tung, Ka Kit

1986-01-01

A nongeostrophic theory of zonally averaged circulation is formulated using the nonlinear primitive equations (mass conservation, thermodynamics, and zonal momentum) on a sphere. The relationship between the mean meridional circulation and diabatic heating rate is studied. Differences between results of nongeostropic theory and the geostrophic formulation concerning the role of eddy forcing of the diabatic circulation and the nonlinear nearly inviscid limit versus the geostrophic limit are discussed. Consideration is given to the Eliassen-Palm flux divergence, the Eliassen-Palm pseudodivergence, the nonacceleration theorem, and the nonlinear nongeostrophic Taylor relationship.

Contribution of zonal harmonics to gravitational moment

NASA Technical Reports Server (NTRS)

Roithmayr, Carlos M.

1991-01-01

It is presently demonstrated that a recursive vector-dyadic expression for the contribution of a zonal harmonic of degree n to the gravitational moment about a small body's center-of-mass is obtainable with a procedure that involves twice differentiating a celestial body's gravitational potential with respect to a vector. The recursive property proceeds from taking advantage of a recursion relation for Legendre polynomials which appear in the gravitational potential. The contribution of the zonal harmonic of degree 2 is consistent with the gravitational moment exerted by an oblate spheroid.

Contribution of zonal harmonics to gravitational moment

NASA Astrophysics Data System (ADS)

Roithmayr, Carlos M.

1991-02-01

It is presently demonstrated that a recursive vector-dyadic expression for the contribution of a zonal harmonic of degree n to the gravitational moment about a small body's center-of-mass is obtainable with a procedure that involves twice differentiating a celestial body's gravitational potential with respect to a vector. The recursive property proceeds from taking advantage of a recursion relation for Legendre polynomials which appear in the gravitational potential. The contribution of the zonal harmonic of degree 2 is consistent with the gravitational moment exerted by an oblate spheroid.

Direct evidence of stationary zonal flows and critical gradient behavior for Er during formation of the edge pedestal in JET

NASA Astrophysics Data System (ADS)

Hillesheim, Jon

2015-11-01

High spatial resolution measurements with Doppler backscattering in JET have provided new insights into the development of the edge radial electric field during pedestal formation. The characteristics of Er have been studied as a function of density at 2.5 MA plasma current and 3 T toroidal magnetic field. We observe fine-scale spatial structure in the edge Er well prior to the LH transition, consistent with stationary zonal flows. Zonal flows are a fundamental mechanism for the saturation of turbulence and this is the first direct evidence of stationary zonal flows in a tokamak. The radial wavelength of the zonal flows systematically decreases with density. The zonal flows are clearest in Ohmic conditions, weaker in L-mode, and absent in H-mode. Measurements also show that after neutral beam heating is applied, the edge Er builds up at a constant gradient into the core during L-mode, at radii where Er is mainly due to toroidal velocity. The local stability of velocity shear driven turbulence, such as the parallel velocity gradient mode, will be assessed with gyrokinetic simulations. This critical Er shear persists across the LH transition into H-mode. Surprisingly, a reduction in the apparent magnitude of the Er well depth is observed directly following the LH transition at high densities. Establishing the physics basis for the LH transition is important for projecting scalings to ITER and these observations challenge existing models based on increased Er shear or strong zonal flows as the trigger for the transition. This work has been carried out within the framework of the EUROfusion Consortium and has received funding from the Euratom research and training programme 2014-2018 under grant agreement No 633053. The views and opinions expressed herein do not necessarily reflect those of the European Commission.

Zonal NePhRO scoring system: a superior renal tumor complexity classification model.

PubMed

Hakky, Tariq S; Baumgarten, Adam S; Allen, Bryan; Lin, Hui-Yi; Ercole, Cesar E; Sexton, Wade J; Spiess, Philippe E

2014-02-01

Since the advent of the first standardized renal tumor complexity system, many subsequent scoring systems have been introduced, many of which are complicated and can make it difficult to accurately measure data end points. In light of these limitations, we introduce the new zonal NePhRO scoring system. The zonal NePhRO score is based on 4 anatomical components that are assigned a score of 1, 2, or 3, and their sum is used to classify renal tumors. The zonal NePhRO scoring system is made up of the (Ne)arness to collecting system, (Ph)ysical location of the tumor in the kidney, (R)adius of the tumor, and (O)rganization of the tumor. In this retrospective study, we evaluated patients exhibiting clinical stage T1a or T1b who underwent open partial nephrectomy performed by 2 genitourinary surgeons. Each renal unit was assigned both a zonal NePhRO score and a RENAL (radius, exophytic/endophytic properties, nearness of tumor to the collecting system or sinus in millimeters, anterior/posterior, location relative to polar lines) score, and a blinded reviewer used the same preoperative imaging study to obtain both scores. Additional data points gathered included age, clamp time, complication rate, urine leak rate, intraoperative blood loss, and pathologic tumor size. One hundred sixty-six patients underwent open partial nephrectomy. There were 37 perioperative complications quantitated using the validated Clavien-Dindo system; their occurrence was predicted by the NePhRO score on both univariate and multivariate analyses (P = .0008). Clinical stage, intraoperative blood loss, and tumor diameter were all correlated with the zonal NePhRO score on univariate analysis only. The zonal NePhRO scoring system is a simpler tool that accurately predicts the surgical complexity of a renal lesion. Copyright © 2014 Elsevier Inc. All rights reserved.

Shear-flow trapped-ion-mode interaction revisited. II. Intermittent transport associated with low-frequency zonal flow dynamics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ghizzo, A., E-mail: alain.ghizzo@univ-lorraine.fr; Palermo, F.

We address the mechanisms underlying low-frequency zonal flow generation in turbulent system and the associated intermittent regime of ion-temperature-gradient (ITG) turbulence. This model is in connection with the recent observation of quasi periodic zonal flow oscillation at a frequency close to 2 kHz, at the low-high transition, observed in the ASDEX Upgrade [Conway et al., Phys. Rev. Lett. 106, 065001 (2011)] and EAST tokamak [Xu et al., Phys. Rev. Lett 107, 125001 (2011)]. Turbulent bursts caused by the coupling of Kelvin-Helmholtz (KH) driven shear flows with trapped ion modes (TIMs) were investigated by means of reduced gyrokinetic simulations. It was foundmore » that ITG turbulence can be regulated by low-frequency meso-scale zonal flows driven by resonant collisionless trapped ion modes (CTIMs), through parametric-type scattering, a process in competition with the usual KH instability.« less

Eddy, drift wave and zonal flow dynamics in a linear magnetized plasma

PubMed Central

Arakawa, H.; Inagaki, S.; Sasaki, M.; Kosuga, Y.; Kobayashi, T.; Kasuya, N.; Nagashima, Y.; Yamada, T.; Lesur, M.; Fujisawa, A.; Itoh, K.; Itoh, S.-I.

2016-01-01

Turbulence and its structure formation are universal in neutral fluids and in plasmas. Turbulence annihilates global structures but can organize flows and eddies. The mutual-interactions between flow and the eddy give basic insights into the understanding of non-equilibrium and nonlinear interaction by turbulence. In fusion plasma, clarifying structure formation by Drift-wave turbulence, driven by density gradients in magnetized plasma, is an important issue. Here, a new mutual-interaction among eddy, drift wave and flow in magnetized plasma is discovered. A two-dimensional solitary eddy, which is a perturbation with circumnavigating motion localized radially and azimuthally, is transiently organized in a drift wave – zonal flow (azimuthally symmetric band-like shear flows) system. The excitation of the eddy is synchronized with zonal perturbation. The organization of the eddy has substantial impact on the acceleration of zonal flow. PMID:27628894

Longitudinal variability in Jupiter's zonal winds derived from multi-wavelength HST observations

NASA Astrophysics Data System (ADS)

Johnson, Perianne E.; Morales-Juberías, Raúl; Simon, Amy; Gaulme, Patrick; Wong, Michael H.; Cosentino, Richard G.

2018-06-01

Multi-wavelength Hubble Space Telescope (HST) images of Jupiter from the Outer Planets Atmospheres Legacy (OPAL) and Wide Field Coverage for Juno (WFCJ) programs in 2015, 2016, and 2017 are used to derive wind profiles as a function of latitude and longitude. Wind profiles are typically zonally averaged to reduce measurement uncertainties. However, doing this destroys any variations of the zonal-component of winds in the longitudinal direction. Here, we present the results derived from using a "sliding-window" correlation method. This method adds longitudinal specificity, and allows for the detection of spatial variations in the zonal winds. Spatial variations are identified in two jets: 1 at 17 ° N, the location of a prominent westward jet, and the other at 7 ° S, the location of the chevrons. Temporal and spatial variations at the 24°N jet and the 5-μm hot spots are also examined.

Trends in the Zonal Winds over the Southern Ocean from the NCEP/NCAR Reanalysis and Scatterometers

NASA Astrophysics Data System (ADS)

Richman, J. G.

2002-12-01

The winds over the Southern Ocean for the entire 54-year (1948-2001) period of the NCEP/NCAR Reanalysis have been decomposed into Principal Components (Empirical Orthogonal Functions). The first EOF describes 83 percent of the variance in the zonal wind. The loading of the EOF shows the predominately westerly surface flow with strongest winds in the Indian sector of the Southern Ocean. The structure of this EOF is similar to the Southern Annular Mode (SAM) identified by Thompson, et al 2000. The amplitude of this EOF reveals a large trend of 4.42 cm/s/yr in the strength of the zonal wind corresponding to a nearly 50 percent increase in the wind stress over the Southern Ocean. Such a trend, if real, would be important in the dynamics of the Antarctic Circumpolar Current (ACC). Recent studies by Gille, et al. (2001), Olbers and Ivchenko (2001) and Gent et al. (2001) have shown that the transport of the ACC is correlated to the variability in the zonal wind with a monotonic increase in the transport with increasing zonal wind strength. However, errors in the data assimilation scheme for surface pressure observations on the Antarctic continent appears to have caused a spurious trend in the sea level pressure south of 40S of -0.2 hPa/yr (Hines, et al. 2000 and Marshall, 2002). The sea level pressure difference between 40S and 60S has risen by 8 hPa over the same period. This sea level pressure difference is used as a proxy for the strength of the zonal winds. Thus, the trend in the zonal wind EOF amplitude may be an artifact of model errors in the NCEP Reanalysis. To check this trend, we analyzed scatterometer winds over the Southern Ocean from the SEASAT, ERS (1 and 2), NSCAT and QuikScat satellites. The scatterometer data is not used in the NCEP Reanalysis and, thus, is an independent estimate of the winds. The SEASAT Scatterometer (SASS) operated for 90 days in July-September, 1978, while the ERS, NSCAT and QuikScat scatterometers provide a continuous dataset from September 1992 through the present. The zonal winds for the combined ERS/NSCAT dataset were decomposed into Principal Components, similar to the NCEP winds. The first EOF describes 78 percent of the variance in the zonal wind. The loading of the EOF is nearly identical in structure to the loading of the NCEP EOF, and the correlation between the amplitudes is 0.93 for the coincident period. The trend in the scatterometer winds is 3.9 cm/s/yr for the eight years, which is not significantly different from the 4.4 cm /s/yr trend of the NCEP winds. The three months of SASS data were projected onto the scatterometer EOF and the amplitudes compared to the long-term NCEP amplitudes. The agreement between the scatterometer amplitudes and the NCEP is remarkable. The comparison between the scatterometer winds and NCEP Reanalysis winds suggests that the trend towards increasing zonal winds is real. The increasing zonal winds over the Southern Ocean may lead to a substantial increase in the transport of the ACC over the past 50 years.

Comparative analysis of zonal systems for macro-level crash modeling.

PubMed

Cai, Qing; Abdel-Aty, Mohamed; Lee, Jaeyoung; Eluru, Naveen

2017-06-01

Macro-level traffic safety analysis has been undertaken at different spatial configurations. However, clear guidelines for the appropriate zonal system selection for safety analysis are unavailable. In this study, a comparative analysis was conducted to determine the optimal zonal system for macroscopic crash modeling considering census tracts (CTs), state-wide traffic analysis zones (STAZs), and a newly developed traffic-related zone system labeled traffic analysis districts (TADs). Poisson lognormal models for three crash types (i.e., total, severe, and non-motorized mode crashes) are developed based on the three zonal systems without and with consideration of spatial autocorrelation. The study proposes a method to compare the modeling performance of the three types of geographic units at different spatial configurations through a grid based framework. Specifically, the study region is partitioned to grids of various sizes and the model prediction accuracy of the various macro models is considered within these grids of various sizes. These model comparison results for all crash types indicated that the models based on TADs consistently offer a better performance compared to the others. Besides, the models considering spatial autocorrelation outperform the ones that do not consider it. Based on the modeling results and motivation for developing the different zonal systems, it is recommended using CTs for socio-demographic data collection, employing TAZs for transportation demand forecasting, and adopting TADs for transportation safety planning. The findings from this study can help practitioners select appropriate zonal systems for traffic crash modeling, which leads to develop more efficient policies to enhance transportation safety. Copyright © 2017 Elsevier Ltd and National Safety Council. All rights reserved.

Theoretical and experimental zonal drift velocities of the ionospheric plasma bubbles over the Brazilian region

NASA Astrophysics Data System (ADS)

Arruda, Daniela C. S.; Sobral, J. H. A.; Abdu, M. A.; Castilho, Vivian M.; Takahashi, H.; Medeiros, A. F.; Buriti, R. A.

2006-01-01

This work presents equatorial ionospheric plasma bubble zonal drift velocity observations and their comparison with model calculations. The bubble zonal velocities were measured using airglow OI630 nm all-sky digital images and the model calculations were performed taking into account flux-tube integrated Pedersen conductivity and conductivity weighted neutral zonal winds. The digital images were obtained from an all-sky imaging system operated over the low-latitude station Cachoeira Paulista (Geogr. 22.5S, 45W, dip angle 31.5S) during the period from October 1998 to August 2000. Out of the 138 nights of imager observation, 29 nights with the presence of plasma bubbles are used in this study. These 29 nights correspond to geomagnetically rather quiet days (∑K P < 24+) and were grouped according to season. During the early night hours, the calculated zonal drift velocities were found to be larger than the experimental values. The best matching between the calculated and observed zonal velocities were seen to be for a few hours around midnight. The model calculation showed two humps around 20 LT and 24 LT that were not present in the data. Average decelerations obtained from linear regression between 20 LT and 24 LT were found to be: (a) Spring 1998, -8.61 ms -1 h -1; (b) Summer 1999, -0.59 ms -1 h -1; (c) Spring 1999, -11.72 ms -1 h -1; and (d) Summer 2000, -8.59 ms -1 h -1. Notice that Summer and Winter here correspond to southern hemisphere Summer and Winter, not northern hemisphere.

Comparison of the visual and intraocular optical performance of a refractive multifocal IOL with rotational asymmetry and an apodized diffractive multifocal IOL.

PubMed

Alió, Jorge L; Plaza-Puche, Ana B; Javaloy, Jaime; Ayala, María José

2012-02-01

To compare the visual outcomes and intraocular optical quality observed postoperatively in patients implanted with a rotationally asymmetric multifocal intraocular lens (IOL) and an apodized diffractive multifocal IOL. Seventy-four consecutive eyes of 40 cataract patients (age range: 36 to 79 years) were divided into two groups: zonal refractive group, 39 eyes implanted with a rotationally asymmetric multifocal IOL (Lentis Mplus LS-312 IOL, Oculentis GmbH); and diffractive group, 35 eyes implanted with an apodized diffractive multifocal IOL (ReSTOR SN6AD3, Alcon Laboratories Inc). Distance and near visual acuity outcomes, contrast sensitivity, intraocular optical quality, and defocus curves were evaluated during 3-month follow-up. Calculation of the intraocular aberrations was performed by subtracting corneal aberrations from total ocular aberrations. Uncorrected near visual acuity and distance-corrected near visual acuity were better in the diffractive group than in the zonal refractive group (P=.01), whereas intermediate visual acuity (defocus +1.00 and +1.50 diopters) was better in the zonal refractive group. Photopic contrast sensitivity was significantly better in the zonal refractive group (P=.04). Wavefront aberrations (total, higher order, tilt, primary coma) were significantly higher in the zonal refractive group than in the diffractive group (P=.02). Both multifocal IOLs are able to successfully restore visual function after cataract surgery. The zonal refractive multifocal IOL provides better results in contrast sensitivity and intermediate vision, whereas the diffractive multifocal IOL provides better near vision at a closer distance. Copyright 2012, SLACK Incorporated.

Stratospheric ozone variations in the equatorial region as seen in Stratiospheric Aerosol and Gas Experiment data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shiotani, M.; Hasebe, F.

1994-07-01

An analysis is made of equatorial ozone variations for 5 years, 1984-1989, using the ozone profile data derived from the Stratospheric Aerosol and Gas Experiment II (SAGE II) instrument. Attention is focused on the annual cycle and also on interannual variability, particularly the quasi-biennial oscillation (QBO) and El Nino-Southern Oscillation (ENSO) variations in the lower stratosphere, where the largest contribution to total column ozone takes place. The annual variation in zonal mean total ozone around the equator is composed of symmetric and asymmetric modes with respect to the equator, with maximum contributions being around 19 km for the symmetric modemore » and around 25 km for the asymmetric mode. The persistent zonal wavenumber 1 structure observed by the total ozone mapping spectrometer over the equator is almost missing in the SAGE-derived column amounts integrated in the stratosphere, suggesting a significant contribution from tropospheric ozone. Interannual variations in the equatorial ozone are dominated by the QBO above 20 km and the ENSO-related variation below 20 km. The ozone QBO is characterized by zonally uniform phase changes in association with the zonal wind QBO in the equatorial lower stratosphere. The ENSO-related ozone variation consists of both the east-west vacillation and the zonally uniform phase variation. During the El Nino event, the east-west contrast with positive (negative) deviations in the eastern (western) hemisphere is conspicuous, while the decreasing tendency of the zonal mean values is maximum at the same time.« less

Stratospheric ozone variations in the equatorial region as seen in Stratospheric and Gas Experiment data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Masato Shiotani; Fumio Hasebe

1994-07-20

An analysis is made of equatorial ozone variations for 5 years, 1984-1989, using the ozone profile data derived from the Stratospheric Aerosol and Gas Experiment II (SAGE II) instrument. Attention is focused on the annual cycle and also on interannual variability, particularly the quasi-biennial oscillation (QBO) and El Nino-Southern Oscillation (ENSO) variations in the lower stratosphere, where the largest contribution to total column ozone takes place. The annual variation in zonal mean total ozone around the equator is composed of symmetric and asymmetric modes with respect to the equator, with maximum contributions being around 19 km for the symmetric modemore » and around 25 km for the asymmetric mode. The persistent zonal wavenumber 1 structure observed by the total ozone mapping spectrometer over the equator is almost missing in the SAGE-derived column amounts integrated in the stratosphere, suggesting a significant contribution from tropospheric ozone. Interannual variations in the equatorial ozone are dominated by the QBO above 20 km and the ENSO-related variation below 20 km. The ozone QBO is characterized by zonally uniform phase changes in association with the zonal wind QBO in the equatorial lower stratosphere. The ENSO-related ozone variation consists of both the east-west vacillation and the zonally uniform phase variation. During the El Nino event, the east-west contrast with positive (negative) deviations in the eastern (western) hemisphere is conspicuous, while the decreasing tendency of the zonal mean values is maximum at the same time. 28 refs., 13 figs.« less

Shape, zonal winds and gravitational field of Jupiter: a fully self-consistent, multi-layered model

NASA Astrophysics Data System (ADS)

Schubert, Gerald; Kong, Dali; Zhang, Keke

2016-10-01

We construct a three-dimensional, finite-element, fully self-consistent, multi-layered,non-spheroidal model of Jupiter consisting of an inner core, a metallic electrically conducting dynamo region and an outer molecular electrically insulating envelope. We assume that the Jovian zonal winds are on cylinders parallel to the rotation axis but, due to the effect of magnetic braking, are confined within the outer molecular envelope. Two related calculations are carried out. The first provides an accurate description of the shape and internal density profile of Jupiter; the effect of rotational distortion is not treated as a small perturbation on a spherically symmetric state. This calculation determines the density, size and shape of the inner core, the irregular shape of the 1-bar pressure level, and the internal structure of Jupiter; the full effect of rotational distortion, without the influence of the zonal winds, is accounted for. Our multi-layered model is able to produce the known mass, the known equatorial and polar radii, and the known zonal gravitational coefficient J2 of Jupiter within their error bars; it also yields the coefficients J4 and J6 within about 5% accuracy, and the core equatorial radius 0.09RJ containing 3.73 Earth masses.The second calculation determines the variation of the gravitational field caused solely by the effect of the zonal winds on the rotationally distorted non-spheroidal Jupiter. Four different cases, ranging from a deep wind profile to a very shallow profile, are considered and implications for accurate interpretation of the zonal gravitational coefficients expected from the Juno mission are discussed.

Traditional medicine in Sakarya province (Turkey) and antimicrobial activities of selected species.

PubMed

Uzun, Ergin; Sariyar, Günay; Adsersen, Anne; Karakoc, Berna; Otük, Gülten; Oktayoglu, Ercan; Pirildar, Sevda

2004-12-01

Traditional medicine in North-West of Turkey (Sakarya province) were studied during a 2 months field study by interviewing local informants from several villages. Plant species used to treat infections were tested for antimicrobial activity. Information was collected for 46 plant species from 30 families and for 5 animal species. Twenty four of the plant species were cultivated. Most used families were Asteraceae, Cucurbitaceae, Lamiaceae and Rosaceae and the most used plants were Artemisia absinthium, Equisetum telmateia, Lavandula stoechas, Melissa officinalis, Tussilago farfara and Urtica dioica. A total of 139 medicinal uses were obtained. Plants are used mainly for infectious diseases (18%), for neurological and psychological disorders (13.7%), cardiovascular disorders (13%), skin disorders (12.2%) and respiratory disorders (10.1%). Extracts were tested in vitro for antimicrobial activity against Staphylococcus aureus ATCC 65538, Staphylococcus epidermidis ATCC 12228, Escherichia coli ATCC 8739, Klebsiella pneumonia ATCC 4352, Pseudomonas aeruginosa ATCC 1539, Salmonella typhi, Shigella flexneri, Proteus mirabilis and Candida albicans ATCC 10231, using microbroth dilution technique according to National Committee for Clinical Laboratory Standards (NCCLS). This research showed that Arum maculatum, Datura stramonium, Geranium asphodeloides and Equisetum telmateia petroleum ether extracts had MIC values of 39.1 microg/ml, 78.1 microg/ml, 78.1 microg/ml and 39.1 microg/ml, respectively against Staphylococcus epidermidis. Datura stramonium petroleum ether extract had a MIC value of 39.1 microg/ml against Escherichia coli and Trachystemon orientalis ethanol extract had a MIC value of 39.1 microg/ml against Escherichia coli. The antimicrobial activity of Arum maculatum, Equisetum telmateia, Geranium asphodeloides, Plantago intermedia, Senecio vulgaris and Trachystemon orientalis has been reported here for the first time.

Acquisition of physical dormancy and ontogeny of the micropyle--water-gap complex in developing seeds of Geranium carolinianum (Geraniaceae).

PubMed

Gama-Arachchige, N S; Baskin, J M; Geneve, R L; Baskin, C C

2011-07-01

The 'hinged valve gap' has been previously identified as the initial site of water entry (i.e. water gap) in physically dormant (PY) seeds of Geranium carolinianum (Geraniaceae). However, neither the ontogeny of the hinged valve gap nor acquisition of PY by seeds of Geraniaceae has been studied previously. The aims of the present study were to investigate the physiological events related to acquisition of PY and the ontogeny of the hinged valve gap and seed coat of G. carolinianum. Seeds of G. carolinianum were studied from the ovule stage until dispersal. The developmental stages of acquisition of germinability, physiological maturity and PY were determined by seed measurement, germination and imbibition experiments using intact seeds and isolated embryos of both fresh and slow-dried seeds. Ontogeny of the seed coat and water gap was studied using light microscopy. Developing seeds achieved germinability, physiological maturity and PY on days 9, 14 and 20 after pollination (DAP), respectively. The critical moisture content of seeds on acquisition of PY was 11 %. Slow-drying caused the stage of acquisition of PY to shift from 20 to 13 DAP. Greater extent of cell division and differentiation at the micropyle, water gap and chalaza than at the rest of the seed coat resulted in particular anatomical features. Palisade and subpalisade cells of varying forms developed in these sites. A clear demarcation between the water gap and micropyle is not evident due to their close proximity. Acquisition of PY in seeds of G. carolinianum occurs after physiological maturity and is triggered by maturation drying. The micropyle and water gap cannot be considered as two separate entities, and thus it is more appropriate to consider them together as a 'micropyle--water-gap complex'.

Latitudinal and Longitudinal Basin-scale Surface Salinity Contrasts and Freshwater Transport by Ocean Thermohaline Circulation

NASA Astrophysics Data System (ADS)

Seidov, D.; Haupt, B. J.

2003-12-01

The role of sea surface salinity (SSS) contrasts in maintaining vigorous global ocean thermohaline circulation (THC) is revisited. Relative importance of different generalizations of sea surface conditions in climate studies is explored. In numerical experiments using an ocean general circulation model, we have aggregated the observed sea surface temperature (SST) and SSS in several different ways: we used observed unchanged SST with SSS taken as constant (34.25 psu) everywhere; SST unchanged, and SSS zonally averaged globally, i.e., in the whole World Ocean; SST averaged globally, and SSS unchanged; SST zonally averaged globally and SSS zonally averaged basin-wide in individual basins, i.e., in the Atlantic, Indian, Pacific, and Southern Oceans separately; and, finally, both SST and SSS zonally averaged in individual basins. Global zonal averaging removes all longitudinal differences in sea surface climatology among ocean basins. However, latitudinal profiles of zonally averaged parameters preserve the main character of large-scale equator-to-pole sea surface variability. Basin-wide zonal averaging does an even better job of preserving latitudinal distributions within each basin. The results of the experiments could hardly be anticipated a priory. Surprisingly, SST could be used as a 2-D field, or as a zonally-averaged field without much difference in the THC dynamics. Moreover, SST could be averaged either globally, or basin-wide, and it also did not change the overall character of THC. At the same time, THC responded vigorously to how the SSS has been changed. It appeared that the THC structure with the globally averaged SST and basin-wide averaged SSS was very close to the one obtained in the control run (control run operates with 2-D observed SST and SSS). Our main conclusion is that ocean-wide inter-basin sea surface salinity contrasts serve as the major controlling element in global thermohaline circulation. Thermal inter-basin contrasts, as well as longitudinal variation in SSS, are less important than latitudinal thermal gradients and inter-basin salinity contrasts. Details of SSS also decrease in importance as soon as its inter-basin contrasts are retained. This is especially important for paleoclimate and future climate simulations, as only the large-scale inter-basin contrasts of the sea surface conditions really matter.

Equatorial Oscillations in Jupiter's and Saturn's Atmospheres

NASA Technical Reports Server (NTRS)

Flasar, F. Michael; Guerlet, S.; Fouchet, T.; Schinder, P. J.

2011-01-01

Equatorial oscillations in the zonal-mean temperatures and zonal winds have been well documented in Earth's middle atmosphere. A growing body of evidence from ground-based and Cassini spacecraft observations indicates that such phenomena also occur in the stratospheres of Jupiter and Saturn. Earth-based midinfrared measurements spanning several decades have established that the equatorial stratospheric temperatures on Jupiter vary with a cycle of 4-5 years and on Saturn with a cycle of approximately 15 years. Spectra obtained by the Composite Infrared Spectrometer (CIRS) during the Cassini swingby at the end of 2000, with much better vertical resolution than the ground-based data, indicated a series of vertically stacked warm and cold anomalics at Jupiter's equator; a similar structurc was seen at Saturn's equator in CIRS limb measurements made in 2005, in the early phase of Cassini's orbital tour. The thermal wind equation implied similar patterns of mean zonal winds increasing and decreasing with altitude. On Saturn the peak-to-pcak amplitude of this variation was nearly 200 meters per second. The alternating vertical pattern of wanner and colder cquatorial tcmperatures and easterly and westerly tendencies of the zonal winds is seen in Earth's equatorial oscillations, where the pattern descends with time, The Cassini Jupiter and early Saturn observations were snapshots within a limited time interval, and they did not show the temporal evolution of the spatial patterns. However, more recent Saturn observations by CIRS (2010) and Cassini radio-occultation soundings (2009-2010) have provided an opportunity to follow the change of the temperature-zonal wind pattern, and they suggest there is descent, at a rate of roughly one scale height over four years. On Earth, the observed descent in the zonal-mean structure is associated with the absorption of a combination of vertically propagating waves with easlerly and westerly phase velocities. The peak-to-peak zonal wind amplitude in the oscillation pattern and the rate of descent constrain the absorbed wave flux of zonal momentum. On Saturn this is approximately 0.05 square meters per square seconds, which is comparable to if not greater than that associated with the terrestrial oscillations. We discuss possible candidates for the absorbed waves on Saturn. On Earth the wave forcing of the equatorial oscillation generales secondary circulations that can affcct the temperature and wind structure at latitudes well away from the equator, and we discuss possible evidence of that on Saturn.

Effect of Resonant Magnetic Perturbations on secondary structures in Drift-Wave turbulence

NASA Astrophysics Data System (ADS)

Leconte, Michael

2011-10-01

In this work, we study the effects of RMPs on turbulence, flows and confinement, in the framework of two paradigmatic models, resistive ballooning and resistive drift waves. For resistive ballooning turbulence, we use 3D global numerical simulations, including RMP fields and (externally-imposed) sheared rotation profile. Without RMPs, relaxation oscillations of the pressure profile occur. With RMPs, results show that long-lived convection cells are generated by the combined effects of pressure modulation and toroidal curvature coupling. These modify the global structure of the turbulence and eliminate relaxation oscillations. This effect is due mainly to a modification of the pressure profile linked to the presence of residual magnetic island chains. Hence convection-cell generation increases for increasing δBr/B0. For RMP effect on zonal flows in drift wave turbulence, we extend the Hasegawa-Wakatani model to include RMP fields. The effect of the RMPs is to induce a linear coupling between the zonal electric field and the zonal density gradient, which drives the system to a state of electron radial force balance for large δBr/B0. Both the vorticity flux (Reynolds stress), and particle flux are modulated. We derive an extended predator prey model which couples zonal potential and density dynamics to the evolution of turbulence intensity. This model has both turbulence drive and RMP amplitude as control parameters, and predicts a novel type of transport bifurcation in the presence of RMPs. We find a novel set of system states that are similar to the Hmode-like state of the standard predator-prey model, but for which the power threshold is now a function of the RMP strength. For small RMP amplitude and low collisionality, both the ambient turbulence and zonal flow energy increase with δBr/B0. For larger RMP strength, the turbulence energy increases, but the energy of zonal flows decreases with δBr/B0, corresponding to a damping of zonal flows. At high collisionnality, zonal flow damping occurs even at small RMP amplitude. Finally, for very strong values of δBr/B0, the system bifurcates back to an Lmode-like state. This work was supported by the World Class Institute (WCI) Program of the National Research Foundation of Korea (NRF) funded by the Ministry of Education, Science and Technology of Korea (MEST).

Role of the evening eastward electric field and the seed perturbations in the sequential occurrence of plasma bubble

NASA Astrophysics Data System (ADS)

Abadi, P.; Otsuka, Y.; Shiokawa, K.; Yamamoto, M.; M Buhari, S.; Abdullah, M.

2017-12-01

We investigate the 3-m ionospheric irregularities and the height variation of equatorial F-region observed by the Equatorial Atmosphere Radar (EAR) at Kototabang (100.3°E, 0.2°S, dip. Lat.: 10.1°S) in Indonesia and ionosondes at Chumphon (99.3°E, 10.7°N, dip. Lat.: 3°N) in Thailand and at Bac Lieu (105.7°E, 9.3°N, dip. Lat.; 1.5°N) in Vietnam, respectively, during March-April from 2011 to 2014. We aim to disclose the relation between pre-reversal enhancement (PRE) of evening eastward electric field and the sequential occurrence of the equatorial plasma bubble (EPB) in the period of 19-22 LT. In summary, (i) we found that the zonal spacing between consecutive EPBs ranges from less than 100 km up to 800 km with a maximum occurrence around 100-300 km as shown in Figure 1(a), and this result is consistent with the previous study [e.g. Makela et al., 2010]; (ii) the probability of the sequential occurrence of the EPB enhances with the increase of PRE strength (see Figure 1(b)); and (iii) Figure 1(c) shows that the zonal spacing between consecutive EPBs is less than 300 km for the weaker PRE (<30 m/s), whereas the zonal spacing is more varied for the stronger PRE (≥30 m/s). Our results remark that the PRE strength is a prominent factor of the sequential occurrence of the EPB. However, we also consider another factor, namely the zonal structure of seed perturbation modulated by gravity wave (GW), and the zonal spacing between consecutive EPBs may fit with the wavelength of the zonal structure of seed perturbation. We particularly attribute the result (iii) to the effects of PRE and seed perturbation on the sequential occurrence of the EPB, that is, we suggest that the weaker PRE could cause the sequential occurrence of the EPB when the zonal structure of seed perturbation has a shorter wavelength. We, however, need a further investigation for confirming the periodic seeding mechanism, and we will use a network of GPS receivers in the western part of Southeast Asia to analyze the zonal wavy structure in the TEC as a manifestation of the seed perturbations.

Triple Cascade Behavior in Quasigeostrophic and Drift Turbulence and Generation of Zonal Jets

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nazarenko, Sergey; Quinn, Brenda

2009-09-11

We study quasigeostrophic (QG) and plasma drift turbulence within the Charney-Hasegawa-Mima (CHM) model. We focus on the zonostrophy, an extra invariant in the CHM model, and on its role in the formation of zonal jets. We use a generalized Fjoertoft argument for the energy, enstrophy, and zonostrophy and show that they cascade anisotropically into nonintersecting sectors in k space with the energy cascading towards large zonal scales. Using direct numerical simulations of the CHM equation, we show that zonostrophy is well conserved, and the three invariants cascade as predicted by the Fjoertoft argument.

A Model Study of Zonal Forcing in the Equatorial Stratosphere by Convectively Induced Gravity Waves

NASA Technical Reports Server (NTRS)

Alexander, M. J.; Holton, James R.

1997-01-01

A two-dimensional cloud-resolving model is used to examine the possible role of gravity waves generated by a simulated tropical squall line in forcing the quasi-biennial oscillation (QBO) of the zonal winds in the equatorial stratosphere. A simulation with constant background stratospheric winds is compared to simulations with background winds characteristic of the westerly and easterly QBO phases, respectively. In all three cases a broad spectrum of both eastward and westward propagating gravity waves is excited. In the constant background wind case the vertical momentum flux is nearly constant with height in the stratosphere, after correction for waves leaving the model domain. In the easterly and westerly shear cases, however, westward and eastward propagating waves, respectively, are strongly damped as they approach their critical levels, owing to the strongly scale-dependent vertical diffusion in the model. The profiles of zonal forcing induced by this wave damping are similar to profiles given by critical level absorption, but displaced slightly downward. The magnitude of the zonal forcing is of order 5 m/s/day. It is estimated that if 2% of the area of the Tropics were occupied by storms of similar magnitude, mesoscale gravity waves could provide nearly 1/4 of the zonal forcing required for the QBO.

Macro and micro rate zonal analytical centrifugation of polydisperse and slowly diffusing sedimenting systems in isovolumetric density gradients. Application to cartilage proteoglycans.

PubMed

Müller, F J; Pezon, C F; Pita, J C

1989-06-13

A method to study the polydispersity of zonally sedimenting and slowly diffusing macromolecules or particles in isokinetic or isovolumetric density gradients is presented. First, a brief theory is given for predicting the zonal profile after a "triangular" (or "inverse") zone is centrifuged. This type of zone is essential to preserve hydrodynamic stability of the very slowly diffusing polydisperse solutes. It is proven, both by semitheoretical considerations and by computer calculations, that the resulting concentration profile of macrosolute is almost identical with that obtainable with a rectangular zone coextensive with the triangular one and carrying the same total mass. Next, practical procedures are described for the convectionless layering of very small triangular zones (50 microL or less). The linearity and stability of the zones are experimentally tested and verified. Finally, the method is applied to cartilage proteoglycan preparations that included either the monomeric molecules only or both the monomeric and the aggregated ones. The zonal results are compared with those obtained by using conventional boundary sedimentation. The two sets of results are seen to coincide fairly well, thus proving that the present technique can add to preparative zonal centrifugation the analytical precision of boundary sedimentation. A multimodal polydisperse system is suggested to describe the aggregated proteoglycan macromolecules.

Gyroaverage effects on nontwist Hamiltonians: Separatrix reconnection and chaos suppression

DOE Office of Scientific and Technical Information (OSTI.GOV)

Del-Castillo-Negrete, Diego B; Martinell, J.

2012-01-01

A study of finite Larmor radius (FLR) effects on E x B test particle chaotic transport in non-monotonic zonal flows with drift waves in magnetized plasmas is presented. Due to the non-monotonicity of the zonal flow, the Hamiltonian does not satisfy the twist condition. The electrostatic potential is modeled as a linear superposition of a zonal flow and the regular neutral modes of the Hasegawa-Mima equation. FLR effects are incorporated by gyro-averaging the E x B Hamiltonian. It is shown that there is a critical value of the Larmor radius for which the zonal flow transitions from a profile withmore » one maximum to a profile with two maxima and a minimum. This bifurcation leads to the creation of additional shearless curves and resonances. The gyroaveraged nontwist Hamiltonian exhibits complex patterns of separatrix reconnection. A change in the Larmor radius can lead to heteroclinic-homoclinic bifurcations and dipole formation. For Larmor radii for which the zonal flow has bifurcated, double heteroclinic-heteroclinic, homoclinic-homoclinic and heteroclinic-homoclinic separatrix topologies are observed. It is also shown that chaotic transport is typically reduced as the Larmor radius increases. Poincare sections show that, for large enough Larmor radius, chaos can be practically suppressed. In particular, changes of the Larmor radius can restore the shearless curve.« less

Gyroaverage effects on nontwist Hamiltonians: separatrix reconnection and chaos suppression

DOE Office of Scientific and Technical Information (OSTI.GOV)

Del-Castillo-Negrete, Diego B; Martinell, J.

2012-01-01

A study of nite Larmor radius (FLR) eects on E B test particle chaotic transport in non- monotonic zonal ows with drift waves in magnetized plasmas is presented. Due to the non- monotonicity of the zonal ow, the Hamiltonian does not satisfy the twist condition. The electro- static potential is modeled as a linear superposition of a zonal ow and regular neutral modes of the Hasegawa-Mima equation. FLR eects are incorporated by gyro-averaging the EB Hamiltonian. It is shown that there is a critical value the Larmor radius for which the zonal ow transitions from a prole with one maximummore » to a prole with two maxima and a minimum. This bifurcation leads to the creation of additional shearless curves and resonances. The gyroaveraged nontwist Hamiltonian exhibits complex patterns of separatrix reconnection. A change in the Larmor ra- dius can lead to heteroclinic-homoclinic bifurcations and dipole formation. For Larmor radii for which the zonal ow has bifurcated, double heteroclinic-heteroclinic, homoclinic-homoclinic and heteroclinic-homoclinic topologies are observed. It is also shown that chaotic transport is typically reduced as the Larmor radius increases. Poincare sections shows that, for large enough Larmor radius, chaos can be practically suppressed. In particular, small changes on the Larmor radius can restore the shearless curve.« less

Simulations of Turbulence in Tokamak Edge and Effects of Self-Consistent Zonal Flows

NASA Astrophysics Data System (ADS)

Cohen, Bruce; Umansky, Maxim

2013-10-01

Progress is reported on simulations of electromagnetic drift-resistive ballooning turbulence in the tokamak edge. This extends previous work to include self-consistent zonal flows and their effects. The previous work addressed simulation of L-mode tokamak edge turbulence using the turbulence code BOUT that solves Braginskii-based plasma fluid equations in tokamak edge domain. The calculations use realistic single-null geometry and plasma parameters of the DIII-D tokamak and produce fluctuation amplitudes, fluctuation spectra, and particle and thermal fluxes that compare favorably to experimental data. In the effect of sheared ExB poloidal rotation is included with an imposed static radial electric field fitted to experimental data. In the new work here we include the radial electric field self-consistently driven by the microturbulence, which contributes to the sheared ExB poloidal rotation (zonal flow generation). We present simulations with/without zonal flows for both cylindrical geometry, as in the UCLA Large Plasma Device, and for the DIII-D tokamak L-mode cases in to quantify the influence of self-consistent zonal flows on the microturbulence and the concomitant transport. This work was performed under the auspices of the U.S. Department of Energy under contract DE-AC52-07NA27344 at the Lawrence Livermore National Laboratory.

Simulations of Tokamak Edge Turbulence Including Self-Consistent Zonal Flows

NASA Astrophysics Data System (ADS)

Cohen, Bruce; Umansky, Maxim

2013-10-01

Progress on simulations of electromagnetic drift-resistive ballooning turbulence in the tokamak edge is summarized in this mini-conference talk. A more detailed report on this work is presented in a poster at this conference. This work extends our previous work to include self-consistent zonal flows and their effects. The previous work addressed the simulation of L-mode tokamak edge turbulence using the turbulence code BOUT. The calculations used realistic single-null geometry and plasma parameters of the DIII-D tokamak and produced fluctuation amplitudes, fluctuation spectra, and particle and thermal fluxes that compare favorably to experimental data. In the effect of sheared ExB poloidal rotation is included with an imposed static radial electric field fitted to experimental data. In the new work here we include the radial electric field self-consistently driven by the microturbulence, which contributes to the sheared ExB poloidal rotation (zonal flow generation). We present simulations with/without zonal flows for both cylindrical geometry, as in the UCLA Large Plasma Device, and for the DIII-D tokamak L-mode cases in to quantify the influence of self-consistent zonal flows on the microturbulence and the concomitant transport. This work was performed under the auspices of the US Department of Energy under contract DE-AC52-07NA27344 at the Lawrence Livermore National Laboratory.

An atlas of objectively analyzed atmospheric cross sections, 1973-1980

NASA Technical Reports Server (NTRS)

Goodman, J.; Gaines, S. E.; Hipskind, R. S.

1985-01-01

Atmospheric variability over time scales greater than one month is conceptually simplified and readily recognized from vertical cross-sections of zonal-monthly mean data. The reduction to two dimensions, latitude and height, explicitly eliminates all zonal waves but implicity retains their effects on the thermal-pressure fields and the dynamically related zonal wind fields. This atlas contains 96 examples, spanning all latitudes in both the northern and southern hemispheres and two decades in pressure, from 1000 to 10 mb. Four analyses, representing each month from January 1973 through December 1980, depicts the potential virtual temperature, the observed zonal wind velocity, the virtual temperature and the geostrophic zonal wind velocity. Each variable is contoured at a close interval to facilitate visual estimates of stability and vorticity via their gradients. The analyses are generated and contoured by objective computer methods from just one data source: in situ measurements from the conventional rawin-radiosonde system. Although the analyses are independently made at constant pressure levels (the mandatory levels) the cross-sections are drawn with geopotential height as the ordinate. With this ordinate one can observe the seasonal expansion and contraction of the earth's atmosphere, especially that of the polar stratosphere. Also, the quasi-biannual cycle can be identified and studied directly from successive cross-sections.

Auctionable fixed transmission rights for congestion management

NASA Astrophysics Data System (ADS)

Alomoush, Muwaffaq Irsheid

Electric power deregulation has proposed a major change to the regulated utility monopoly. The change manifests the main part of engineers' efforts to reshape three components of today's regulated monopoly: generation, distribution and transmission. In this open access deregulated power market, transmission network plays a major role, and transmission congestion is a major problem that requires further consideration especially when inter-zonal/intra-zonal scheme is implemented. Declaring that engineering studies and experience are the criteria to define zonal boundaries or defining a zone based on the fact that a zone is a densely interconnected area (lake) and paths connecting these densely interconnected areas are inter-zonal lines will render insufficient and fuzzy definitions. Moreover, a congestion problem formulation should take into consideration interactions between intra-zonal and inter-zonal flows and their effects on power systems. In this thesis, we introduce a procedure for minimizing the number of adjustments of preferred schedules to alleviate congestion and apply control schemes to minimize interactions between zones. In addition, we give the zone definition a certain criterion based on the Locational Marginal Price (LMP). This concept will be used to define congestion zonal boundaries and to decide whether any zone should be merged with another zone or split into new zones. The thesis presents a unified scheme that combines zonal and FTR schemes to manage congestion. This combined scheme is utilized with LMPs to define zonal boundaries more appropriately. The presented scheme gains the best features of the FTR scheme, which are providing financial certainty, maximizing the efficient use of the system and making users pay for the actual use of congested paths. LMPs may give an indication of the impact of wheeling transactions, and calculations of and comparisons of LMPs with and without wheeling transactions should be adequate criteria to approve the transaction by the ISO, take a decision to expand the existing system, or retain the original structure of the system. Also, the thesis investigates the impact of wheeling transactions on congestion management, where we present a generalized mathematical model for the Fixed Transmission Right (FTR) auction. The auction guarantees FTR availability to all participants on a non-discriminatory basis, in which system users are permitted to buy, sell and trade FTRs through an auction. When FTRs are utilized with LMPs, they increase the efficient use of the transmission system and let a transmission customer gain advantageous features such as acquiring a mechanism to offset the extra cost due to congestion charges, providing financial and operational certainty and making system users pay for the actual use of the congested paths. The thesis also highlighted FTR trading in secondary markets to self-arrange access across different paths, create long-term transmission rights and provide more commercial certainty.

A technique for inferring zonal irregularity drift from single-station GNSS measurements of intensity (S4) and phase (σφ) scintillations

NASA Astrophysics Data System (ADS)

Carrano, Charles S.; Groves, Keith M.; Rino, Charles L.; Doherty, Patricia H.

2016-08-01

The zonal drift of ionospheric irregularities at low latitudes is most commonly measured by cross-correlating observations of a scintillating satellite signal made with a pair of closely spaced antennas. The Air Force Research Laboratory-Scintillation Network Decision Aid (AFRL-SCINDA) network operates a small number of very high frequency (VHF) spaced-receiver systems at low latitudes for this purpose. A far greater number of Global Navigation Satellite System (GNSS) scintillation monitors are operated by the AFRL-SCINDA network (25-30) and the Low-Latitude Ionospheric Sensor Network (35-50), but the receivers are too widely separated from each other for cross-correlation techniques to be effective. In this paper, we present an alternative approach that leverages the weak scatter scintillation theory to infer the zonal irregularity drift from single-station GNSS measurements of S4, σφ, and the propagation geometry. Unlike the spaced-receiver technique, this approach requires assumptions regarding the height of the scattering layer (which introduces a bias in the drift estimates) and the spectral index of the irregularities (which affects the spread of the drift estimates about the mean). Nevertheless, theory and experiment suggest that the ratio of σφ to S4 is less sensitive to these parameters than it is to the zonal drift. We validate the technique using VHF spaced-receiver measurements of zonal irregularity drift obtained from the AFRL-SCINDA network. While the spaced-receiver technique remains the preferred way to monitor the drift when closely spaced antenna pairs are available, our technique provides a new opportunity to monitor zonal irregularity drift using regional or global networks of widely separated GNSS scintillation monitors.

Temperature Trends in the Tropical Upper Troposphere and Lower Stratosphere: Connections with Sea Surface Temperatures and Implications for Water Vapor and Ozone

NASA Technical Reports Server (NTRS)

Garfinkel, C. I.; Waugh, D. W.; Oman, L. D.; Wang, L.; Hurwitz, M. M.

2013-01-01

Satellite observations and chemistry-climate model experiments are used to understand the zonal structure of tropical lower stratospheric temperature, water vapor, and ozone trends. The warming in the tropical upper troposphere over the past 30 years is strongest near the Indo-Pacific warm pool, while the warming trend in the western and central Pacific is much weaker. In the lower stratosphere, these trends are reversed: the historical cooling trend is strongest over the Indo-Pacific warm pool and is weakest in the western and central Pacific. These zonal variations are stronger than the zonal-mean response in boreal winter. Targeted experiments with a chemistry-climate model are used to demonstrate that sea surface temperature (hereafter SST) trends are driving the zonal asymmetry in upper tropospheric and lower stratospheric tropical temperature trends. Warming SSTs in the Indian Ocean and in the warm pool region have led to enhanced moist heating in the upper troposphere, and in turn to a Gill-like response that extends into the lower stratosphere. The anomalous circulation has led to zonal structure in the ozone and water vapor trends near the tropopause, and subsequently to less water vapor entering the stratosphere. The radiative impact of these changes in trace gases is smaller than the direct impact of the moist heating. Projected future SSTs appear to drive a temperature and water vapor response whose zonal structure is similar to the historical response. In the lower stratosphere, the changes in water vapor and temperature due to projected future SSTs are of similar strength to, though slightly weaker than, that due directly to projected future CO2, ozone, and methane.

Global Increase in UV Irradiance during the Past 30 Years (1979-2008) Estimated from Satellite Data

NASA Technical Reports Server (NTRS)

Herman, Jay R.

2010-01-01

Zonal average ultraviolet irradiance (flux ultraviolet, F(sub uv)) reaching the Earth's surface has significantly increased since 1979 at all latitudes except the equatorial zone. Changes are estimated in zonal average F(sub uv) caused by ozone and cloud plus aerosol reflectivity using an approach based on Beer's law for monochromatic and action spectrum weighted irradiances. For four different cases, it is shown that Beer's Law leads to a power law form similar to that applied to erythemal action spectrum weighted irradiances. Zonal and annual average increases in F(sub uv) were caused by decreases in ozone amount from 1979 to 1998. After 1998, midlatitude annual average ozone amounts and UV irradiance levels have been approximately constant. In the Southern Hemisphere, zonal and annual average UV increase is partially offset by tropospheric cloud and aerosol transmission decreases (hemispherical dimming), and to a lesser extent in the Northern Hemisphere. Ozone and 340 nm reflectivity changes have been obtained from multiple joined satellite time series from 1978 to 2008. The largest zonal average increases in F(sub uv) have occurred in the Southern Hemisphere. For clear-sky conditions at 50 S, zonal average F(sub uv) changes are estimated (305 nm, 23%; erythemal, 8.5%; 310 nm, 10%; vitamin D production, 12%). These are larger than at 50 N (305 nm, 9%; erythemal, 4%; 310 nm, 4%; vitamin D production, 6%). At the latitude of Buenos Aires, Argentina (34.6 S), the clear-sky Fuv increases are comparable to the increases near Washington, D. C. (38.9 N): 305 nm, 9% and 7%; erythemal, 6% and 4%; and vitamin D production, 7% and 5%, respectively.

Electroculture for crop enhancement by air anions

NASA Astrophysics Data System (ADS)

Pohl, H. A.; Todd, G. W.

1981-12-01

Electroculture, the practice of applying strong electric fields or other sources of small air ions to growing plants, has potential to markedly increase crop production and to speed crop growth. The considerable evidence for its effectiveness, and the studies of the mechanisms for its actions are discussed. A mild current of air anions (4 pA/cm2) stimulates bean crop growth and also earlier blossoming and increased growth in the annual, Exacum affine (Persian violet), as well as in seedling geraniums. The present results would indicate that the growing period required until the plants reach a saleable stage of maturity can be shortened by about two weeks under greenhouse conditions.

Cloud motions on Venus - Global structure and organization

NASA Technical Reports Server (NTRS)

Limaye, S. S.; Suomi, V. E.

1981-01-01

Results on cloud motions on Venus obtained over a period of 3.5 days from Mariner 10 television images are presented. The implied atmosphere flow is almost zonal everywhere on the visible disk, and is in the same retrograde sense as the solid planet. Objective analysis of motions suggests the presence of jet cores (-130 m/s) and organized atmospheric waves. The longitudinal mean meridional profile of the zonal component of motion of the ultraviolet features shows presence of a midlatitude jet stream (-110 m/s). The mean zonal component is -97 m/s at the equator. The mean meridional motion at most latitudes is directed toward the pole in either hemisphere and is at least an order of magnitude smaller so that the flow is nearly zonal. A tentative conclusion from the limited coverage available from Mariner 10 is that at the level of ultraviolet features mean meridional circulation is the dominant mode of poleward angular momentum transfer as opposed to the eddy circulation.

Some observed seasonal changes in extratropical general circulation: A study in terms of vorticity. [seasonal migrations of extra tropical frontal jet streams

NASA Technical Reports Server (NTRS)

Srivatsangam, S.; Reiter, E. R.

1973-01-01

Extratropical eddy distributions in four months typical of the four seasons are treated in terms of temporal mean and temporal r.m.s. values of the geostrophic relative vorticity. The geographical distributions of these parameters at the 300 mb level show that the arithmetic mean fields are highly biased representatives of the extratropical eddy distributions. The zonal arithmetic means of these parameters are also presented. These show that the zonal-and-time mean relative vorticity is but a small fraction of the zonal mean of the temporal r.m.s. relative vorticity, K. The reasons for considering the r.m.s. values as the temporal normal values of vorticity in the extratropics are given in considerable detail. The parameter K is shown to be of considerable importance in locating the extratropical frontal jet streams (EFJ) in time-and-zonal average distributions. The study leads to an understanding of the seasonal migrations of the EFJ which have not been explored until now.

Venus' superrotation, mixing length theory and eddy diffusion - A parametric study

NASA Technical Reports Server (NTRS)

Mayr, H. G.; Harris, I.; Schatten, K. H.; Stevens-Rayburn, D. R.; Chan, K. L.

1988-01-01

The concept of the Hadley mechanism is adopted to describe the axisymmetric circulation of the Venus atmosphere. It is shown that, for the atmosphere of a slowly rotating planet such as Venus, a form of the nonliner 'closure' (self-consistent solution) of the fluid dynamics system which constrains the magnitude of the eddy diffusion coefficients can be postulated. A nonlinear one-layer spectral model of the zonally symmetric circulation was then used to establish the relationship between the heat source, the meridional circulation, and the eddy diffusion coefficients, yielding large zonal velocities. Computer experiments indicated that proportional changes in the heat source and eddy diffusion coefficients do not significantly change the zonal velocities. It was also found that, for large eddy diffusion coefficients, the meridional velocity is virtually constant; below a threshold in the diffusion rate, the meridional velocity decreases; and, for large eddy diffusion and small heating rates, the zonal velocities decrease with decreasing planetary rotation rates.

A Method for Optimal Load Dispatch of a Multi-zone Power System with Zonal Exchange Constraints

NASA Astrophysics Data System (ADS)

Hazarika, Durlav; Das, Ranjay

2018-04-01

This paper presented a method for economic generation scheduling of a multi-zone power system having inter zonal operational constraints. For this purpose, the generator rescheduling for a multi area power system having inter zonal operational constraints has been represented as a two step optimal generation scheduling problem. At first, the optimal generation scheduling has been carried out for the zone having surplus or deficient generation with proper spinning reserve using co-ordination equation. The power exchange required for the deficit zones and zones having no generation are estimated based on load demand and generation for the zone. The incremental transmission loss formulas for the transmission lines participating in the power transfer process among the zones are formulated. Using these, incremental transmission loss expression in co-ordination equation, the optimal generation scheduling for the zonal exchange has been determined. Simulation is carried out on IEEE 118 bus test system to examine the applicability and validity of the method.

REVIEWS OF TOPICAL PROBLEMS: Generation of large-scale eddies and zonal winds in planetary atmospheres

NASA Astrophysics Data System (ADS)

Onishchenko, O. G.; Pokhotelov, O. A.; Astafieva, N. M.

2008-06-01

The review deals with a theoretical description of the generation of zonal winds and vortices in a turbulent barotropic atmosphere. These large-scale structures largely determine the dynamics and transport processes in planetary atmospheres. The role of nonlinear effects on the formation of mesoscale vortical structures (cyclones and anticyclones) is examined. A new mechanism for zonal wind generation in planetary atmospheres is discussed. It is based on the parametric generation of convective cells by finite-amplitude Rossby waves. Weakly turbulent spectra of Rossby waves are considered. The theoretical results are compared to the results of satellite microwave monitoring of the Earth's atmosphere.

Observation of Oscillatory Radial Electric Field Relaxation in a Helical Plasma.

PubMed

Alonso, J A; Sánchez, E; Calvo, I; Velasco, J L; McCarthy, K J; Chmyga, A; Eliseev, L G; Estrada, T; Kleiber, R; Krupnik, L I; Melnikov, A V; Monreal, P; Parra, F I; Perfilov, S; Zhezhera, A I

2017-05-05

Measurements of the relaxation of a zonal electrostatic potential perturbation in a nonaxisymmetric magnetically confined plasma are presented. A sudden perturbation of the plasma equilibrium is induced by the injection of a cryogenic hydrogen pellet in the TJ-II stellarator, which is observed to be followed by a damped oscillation in the electrostatic potential. The waveform of the relaxation is consistent with theoretical calculations of zonal potential relaxation in a nonaxisymmetric magnetic geometry. The turbulent transport properties of a magnetic confinement configuration are expected to depend on the features of the collisionless damping of zonal flows, of which the present Letter is the first direct observation.

The 4-5 day mode oscillation in zonal winds of Indian middle atmosphere during MONEX-79

NASA Astrophysics Data System (ADS)

Reddy, R. S.; Mukherjee, B. K.; Indira, K.; Murty, B. V. R.

1985-12-01

In the early studies based on time series of balloon observations, the existence of 4 to 5 day period waves and 10 to 20 day wind fluctuations were found in the tropical lower stratosphere, and they are identified theoretically as the mixed Rossby-gravity wave and the Kelvin wave, respectively. On the basis of these studies, it was established that the vertically propagating equatorial waves play an important role in producing the QBO (quasi-biennial oscillation) in the mean zonal wind through the mechanism of wave-zonal interaction. These studies are mainly concentrated over the equatorial Pacific and Atlantic Oceans. Similar prominent wave disturbances have been observed over the region east of the Indian Ocean during a quasi-biennial oscillation. Zonal winds in upper troposphere and lower stratosphere (10 to 20) km of the middle atmosphere over the Indian subcontinent may bear association with the activity of summer monsoon (June-September). Monsoon Experiment (MONEX-79) has provided upper air observations at Balasore (21 deg. 30 min.N; 85 deg. 56 min.E), during the peak of monsoon months July and August. A unique opportunity has, therefore, been provided to study the normal oscillations present in the zonal winds of lower middle atmosphere over India, which may have implication on large scale wave dynamics. This aspect is examined in the present study.

Development of a mobile Doppler lidar system for wind and temperature measurements at 30-70 km

NASA Astrophysics Data System (ADS)

Yan, Zhaoai; Hu, Xiong; Guo, Wenjie; Guo, Shangyong; Cheng, Yongqiang; Gong, Jiancun; Yue, Jia

2017-02-01

A mobile Doppler lidar system has been developed to simultaneously measure zonal and meridional winds and temperature from 30 to 70 km. Each of the two zonal and meridional wind subsystems employs a 15 W power, 532 nm laser and a 1 m diameter telescope. Iodine vapor filters are used to stabilize laser frequency and to detect the Doppler shift of backscattered signal. The integration method is used for temperature measurement. Experiments were carried out using the mobile Doppler lidar in August 2014 at Qinghai, China (91°E, 38°N). The zonal wind was measured from 20 to 70 km at a 3 km spatial resolution and 2 h temporal resolution. The measurement error is about 0.5 m/s at 30 km, and 10 m/s at 70 km. In addition, the temperature was measured from 30 to 70 km at 1 km spatial resolution and 1 h temporal resolution. The temperature measurement error is about 0.4 K at 30 km, and 8.0 K at 70 km. Comparison of the lidar results with the temperature of the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER), the zonal wind of the Modern-Era Retrospective Analysis for Re-search and Applications (MERRA), and radiosonde zonal wind shows good agreement, indicating that the Doppler lidar results are reliable.

Self-Organization of Zonal Jets in Outer Planet Atmospheres: Uranus and Neptune

NASA Technical Reports Server (NTRS)

Friedson, A. James

1997-01-01

The statistical mechnical theory of a two-dimensional Euler fluid is appleid for the first time to explore the spontaneous self-oganization of zonal jets in outer planet atmospheres. Globally conserved integralls of motion are found to play a central role in defining jet structure.

On the wave forcing of the semi-annual zonal wind oscillation

NASA Technical Reports Server (NTRS)

Nagpal, O. P.; Raghavarao, R.

1991-01-01

Observational evidence of rather large period waves (23-60 d) in the troposphere/stratosphere, particularly during the winter months, is presented. Wind data collected on a regular basis employing high-altitude balloons and meteorological rockets over the past few years are used. Maximum entropy methods applied to the time series of zonal wind data indicate the presence of 23-60-waves more prominently than shorter-period waves. The waves have substantial amplitudes in the stratosphere and lower mesosphere, often larger than those noted in the troposphere. The mean zonal wind in the troposphere (5-15 km altitude) during December, January, and February exhibits the presence of strong westerlies at latitudes between 8 and 21 deg N.

A one-dimensional model of the semiannual oscillation driven by convectively forced gravity waves

NASA Technical Reports Server (NTRS)

Sassi, Fabrizio; Garcia, Rolando R.

1994-01-01

A one-dimensional model that solves the time-dependent equations for the zonal mean wind and a wave of specified zonal wavenumber has been used to illustrate the ability of gravity waves forced by time-dependent tropospheric heating to produce a semiannual oscillation (SAO) in the middle atmosphere. When the heating has a strong diurnal cycle, as observed over tropical landmasses, gravity waves with zonal wavelengths of a few thousand kilometers and phase velocities in the range +/- 40-50 m/sec are excited efficiently by the maximum vertical projection criterion (vertical wavelength approximately equals 2 x forcing depth). Calculations show that these waves can account for large zonal mean wind accelerations in the middle atmosphere, resulting in realistic stratopause and mesopause oscillations. Calculations of the temporal evolution of a quasi-conserved tracer indicate strong down-welling in the upper stratosphere near the equinoxes, which is associated with the descent of the SAO westerlies. In the upper mesosphere, there is a semiannual oscillation in tracer mixing ratio driven by seasonal variability in eddy mixing, which increases at the solstices and decreases at the equinoxes.

Cloud Effects on Meridional Atmospheric Energy Budget Estimated from Clouds and the Earth's Radiant Energy System (CERES) Data

NASA Technical Reports Server (NTRS)

Kato, Seiji; Rose, Fred G.; Rutan, David A.; Charlock, Thomas P.

2008-01-01

The zonal mean atmospheric cloud radiative effect, defined as the difference of the top-of-atmosphere (TOA) and surface cloud radiative effects, is estimated from three years of Clouds and the Earth's Radiant Energy System (CERES) data. The zonal mean shortwave effect is small, though it tends to be positive (warming). This indicates that clouds increase shortwave absorption in the atmosphere, especially in midlatitudes. The zonal mean atmospheric cloud radiative effect is, however, dominated by the longwave effect. The zonal mean longwave effect is positive in the tropics and decreases with latitude to negative values (cooling) in polar regions. The meridional gradient of cloud effect between midlatitude and polar regions exists even when uncertainties in the cloud effect on the surface enthalpy flux and in the modeled irradiances are taken into account. This indicates that clouds increase the rate of generation of mean zonal available potential energy. Because the atmospheric cooling effect in polar regions is predominately caused by low level clouds, which tend to be stationary, we postulate that the meridional and vertical gradients of cloud effect increase the rate of meridional energy transport by dynamics in the atmosphere from midlatitude to polar region, especially in fall and winter. Clouds then warm the surface in polar regions except in the Arctic in summer. Clouds, therefore, contribute in increasing the rate of meridional energy transport from midlatitude to polar regions through the atmosphere.

Role of Atmospheric Transport on the Arctic Amplification: Adjusting Role

NASA Astrophysics Data System (ADS)

KUG, J.; Yim, B.; Jin, F.

2013-12-01

It is controversial whether the atmospheric transport plays a role in arctic amplification. Recently, Hwang et al. (2011) showed that the magnitude of the arctic amplification is negatively correlated with anomalous poleward atmospheric transport. That is, when the arctic amplification is strong (weak), the atmospheric transport plays a negative (positive) role in the arctic amplification. In this study, it is discussed what is a physical mechanism to determine the role of atmospheric transport and relation with the arctic amplification. Here, we suggest adjusting roles of atmospheric transport. The strength of local feedback over the Arctic determines zonal wind changes. The zonal wind changes are determined by two factors. The first one is polar cap cooling, and second is surface warming. They play opposite roles. So, there will be two different zonal wind responses in high-latitude to the greenhouse warming. Depending on the zonal wind response, the atmospheric transport can play a different role because the zonal wind changes can organize synoptic eddy feedbacks including heat flux, which largely contributes to poleward energy transport. We show here that when polar cap cooling is strong, and surface warming over Arctic is relatively weak, the Jet stream tends to be shifted poleward, so it leads to poleward atmospheric transport. On the other hand, when the surface warming is too strong, it lead to southward shift of Jet stream and equatorward atmospheric transport, which paly a negative role in the Arctic amplification.

Numerical simulation of the geometrical-optics reduction of CE2 and comparisons to quasilinear dynamics

NASA Astrophysics Data System (ADS)

Parker, Jeffrey B.

2018-05-01

Zonal flows have been observed to appear spontaneously from turbulence in a number of physical settings. A complete theory for their behavior is still lacking. Recently, a number of studies have investigated the dynamics of zonal flows using quasilinear (QL) theories and the statistical framework of a second-order cumulant expansion (CE2). A geometrical-optics (GO) reduction of CE2, derived under an assumption of separation of scales between the fluctuations and the zonal flow, is studied here numerically. The reduced model, CE2-GO, has a similar phase-space mathematical structure to the traditional wave-kinetic equation, but that wave-kinetic equation has been shown to fail to preserve enstrophy conservation and to exhibit an ultraviolet catastrophe. CE2-GO, in contrast, preserves nonlinear conservation of both energy and enstrophy. We show here how to retain these conservation properties in a pseudospectral simulation of CE2-GO. We then present nonlinear simulations of CE2-GO and compare with direct simulations of quasilinear (QL) dynamics. We find that CE2-GO retains some similarities to QL. The partitioning of energy that resides in the zonal flow is in good quantitative agreement between CE2-GO and QL. On the other hand, the length scale of the zonal flow does not follow the same qualitative trend in the two models. Overall, these simulations indicate that CE2-GO provides a simpler and more tractable statistical paradigm than CE2, but CE2-GO is missing important physics.

Planetary-Scale Inertio Gravity Waves in the Numerical Spectral Model

NASA Technical Reports Server (NTRS)

Mayr, H. G.; Mengel, J. R.; Talaat, E. R.; Porter, H. S.

2004-01-01

In the polar region of the upper mesosphere, horizontal wind oscillations have been observed with periods around 10 hours. Waves with such a period are generated in our Numerical Spectral Model (NSM), and they are identified as planetary-scale inertio gravity waves (IGW). These IGWs have periods between 9 and 11 hours and appear above 60 km in the zonal mean (m = 0), as well as in zonal wavenumbers m = 1 to 4. The waves can propagate eastward and westward and have vertical wavelengths around 25 km. The amplitudes in the wind field are typically between 10 and 20 m/s and can reach 30 m/s in the westward propagating component for m = 1 at the poles. In the temperature perturbations, the wave amplitudes above 100 km are typically 5 K and as large as 10 K for m = 0 at the poles. The IGWs are intermittent but reveal systematic seasonal variations, with the largest amplitudes occurring generally in late winter and spring. In the NSM, the IGW are generated like the planetary waves (PW). They are produced apparently by the instabilities that arise in the zonal mean circulation. Relative to the PWs, however, the IGWs propagate zonally with much larger velocities, such that they are not affected much by interactions with the background zonal winds. Since the IGWs can propagate through the mesosphere without much interaction, except for viscous dissipation, one should then expect that they reach the thermosphere with significant and measurable amplitudes.

The Galileo probe Doppler wind experiment: Measurement of the deep zonal winds on Jupiter

NASA Astrophysics Data System (ADS)

Atkinson, David H.; Pollack, James B.; Seiff, Alvin

1998-09-01

During its descent into the upper atmosphere of Jupiter, the Galileo probe transmitted data to the orbiter for 57.5 min. Accurate measurements of the probe radio frequency, driven by an ultrastable oscillator, allowed an accurate time history of the probe motions to be reconstructed. Removal from the probe radio frequency profile of known Doppler contributions, including the orbiter trajectory, the probe descent velocity, and the rotation of Jupiter, left a measurable frequency residual due to Jupiter's zonal winds, and microdynamical motion of the probe from spin, swing under the parachute, atmospheric turbulence, and aerodynamic buffeting. From the assumption of the dominance of the zonal horizontal winds, the frequency residuals were inverted and resulted in the first in situ measurements of the vertical profile of Jupiter's deep zonal winds. A number of error sources with the capability of corrupting the frequency measurements or the interpretation of the frequency residuals were considered using reasonable assumptions and calibrations from prelaunch and in-flight testing. It is found that beneath the cloud tops (about 700 mbar) the winds are prograde and rise rapidly to 170 m/s at 4 bars. Beyond 4 bars to the depth at which the link with the probe was lost, nearly 21 bars, the winds remain constant and strong. Corrections for the high temperatures encountered by the probe have recently been completed and provide no evidence of diminishing or strengthening of the zonal wind profile in the deeper regions explored by the Galileo probe.

Drug policing assemblages: Repressive drug policies and the zonal banning of drug users in Denmark's club land.

PubMed

Søgaard, Thomas F; Houborg, Esben; Pedersen, Michael M

2017-03-01

Zonal banning of disorderly and intoxicated young people has moved to centre stage in debates about nightlife governance. Whereas existing research has primarily focused on the use of zonal banning orders to address problems of alcohol-related harm and disorder, this article highlights how zonal banning is also used to target drug-using clubbers in Denmark. Based on ethnographic observations and interviews with nightlife control agents in two Danish cities, the article aims to provide new insights into how the enforcement of national drug policies on drug-using clubbers, is shaped by plural nightlife policing complexes. The paper demonstrates how the policing of drug-using clubbers is a growing priority for both police and private security agents. The article also demonstrates how the enforcement of zonal bans on drug-using clubbers involves complex collaborative relations between police, venue owners and private security agents. The paper argues that a third-party policing perspective combined with assemblage theory is useful for highlighting how the enforcement of national drug policies and nightlife banning systems is shaped by their embeddedness in local 'drug policing assemblages' characterized by inter-agency relation-building, the creative combination of public and private (legal) resources and internal power struggles. It also provides evidence of how drug policing assemblages give rise to many different, and often surprising, forms of jurisdiction involving divergent performances of spaces-, objects- and authorities of governance. Copyright © 2016 Elsevier B.V. All rights reserved.

The Diagnosis and application of a convective vorticity vector associated with convective systems

NASA Astrophysics Data System (ADS)

Gao, S.; Zhou, Y.; Tao, W.

2005-05-01

Although dry/moist potential vorticity is a very useful and powerful physical quantity in the large scale dynamics, it is not a quite ideal dynamical tool for the study of convective systems or severe storms. A new convective vorticity vector (CVV) is introduced in this study to identify the development of convective systems or severe storms. The daily Aviation (AVN) Model Data is used to diagnose the distribution of the CVV associated with rain storms occurred in the period of Meiyu in 1998. The results have clearly demonstrated that the CVV is an effective vector for indicating the convective actions along the Meiyu front. The CVV also is used to diagnose a 2-D cloud-resolving simulation data associated with 2-D tropical convection. The cloud model is forced by the vertical velocity, zonal wind, horizontal advection, and sea surface temperature obtained from the Tropical cean-Global tmosphere (TOGA) Coupled Ocean-Atmosphere Response Experiment (COARE) and is integrated for a selected 10-day period. The CVV has zonal and vertical components in the 2-D x-z frame. Analysis of zonally averaged and mass-integrated quantities shows that the correlation coefficient between the vertical component of the CVV and the sum of the cloud hydrometeor mixing ratios is 0.81, whereas the correlation coefficient between the zonal component and the sum of the mixing ratios is only 0.18. This indicates that the vertical component of the CVV is closely associated with tropical convection. The tendency equation for the vertical component of the CVV is derived and the zonally averaged and mass-integrated tendency budgets are analyzed. The tendency of the vertical component of the CVV is determined by the interaction between the vorticity and the zonal gradient of cloud heating. The results demonstrate that the vertical component of the CVV is a cloud-linked parameter and can be used to study tropical convection.

Grid generation about complex three-dimensional aircraft configurations

NASA Technical Reports Server (NTRS)

Klopfer, Goetz H.

1991-01-01

The problem of obtaining three dimensional grids with sufficient resolution to resolve all the flow or other physical features of interest is addressed. The generation of a computational grid involves a series of compromises to resolve several conflicting requirements. On one hand, one would like the grid to be fine enough and not too skewed to reduce the numerical errors and to adequately resolve the pertinent physical features of the flow field about the aircraft. On the other hand, the capabilities of present or even future supercomputers are finite and the number of mesh points must be limited to a reasonable number: one which is usually much less than desired for numerical accuracy. One technique to overcome this limitation is the 'zonal' grid approach. In this method, the overall field is subdivided into smaller zones or blocks in each of which an independent grid is generated with enough grid density to resolve the flow features in that zone. The zonal boundaries or interfaces require special boundary conditions such that the conservation properties of the governing equations are observed. Much work was done in 3-D zonal approaches with nonconservative zonal interfaces. A 3-D zonal conservative interfacing method that is efficient and easy to implement was developed during the past year. During the course of the work, it became apparent that it would be much more feasible to do the conservative interfacing with cell-centered finite volume codes instead of the originally planned finite difference codes. Accordingly, the CNS code was converted to finite volume form. This new version of the code is named CNSFV. The original multi-zonal interfacing capability of the CNS code was enhanced by generalizing the procedure to allow for completely arbitrarily shaped zones with no mesh continuity between the zones. While this zoning capability works well for most flow situations, it is, however, still nonconservative. The conservative interface algorithm was also implemented but was not completely validated.

Negative post sunset height rise of F layer: Causes and implications

NASA Astrophysics Data System (ADS)

Joshi, Lalit Mohan; Patra, Amit

Post sunset height rise (PSHR) of the F layer is a manifestation of the pre reversal enhancement (PRE) of zonal electric field in the equatorial and low latitude ionosphere. Ionosonde observations, made during the equinox period from Sriharikota (13.7 degree North, 80.1 degree East, 6.7 degree North magnetic latitude), a low latitude station in India, have been utilized to study the PSHR of the F layer. Normally, the height of the F layer increases during the early post sunset period (positive PSHR) whose magnitude has a direct bearing on the equatorial spread F (ESF). However, observations revealed that on a few nights (about 3% nights) the height of the F layer descended in the early post sunset period itself, indicating the absence of PRE of zonal field. Such events have been termed as negative PSHR events. Such events never preceded ESF. Detailed investigations revealed that the negative PSHR events were accompanied by an enhancement of low latitude sporadic E (Es) activity with increase in the Es blanketing (fbEs) and top (ftEs) frequencies, during the post sunset period. Numerical simulations have been carried out to evaluate the effectiveness of the westward Pedersen and Hall conductivity gradients that exists in the low latitude E region during the evening hours, in causing the PRE of zonal field and the PSHR of the F layer. Model simulation reveals that the dominant cause of PRE of zonal field is the divergence of Hall current in the low latitude E region. When the zonal conductivity gradient of the low latitude E region was assumed to be either zero or slightly eastward, owing to the intensification of Es, model computation resulted in the negative PSHR of the F layer. Thus, the observational and computational results highlight the important role of the low latitude Es in the PRE of the zonal electric field.

A Preliminary Study on the Circulation of an ocean covering a Synchronously Rotating Planet

NASA Astrophysics Data System (ADS)

Matsuo, H.; Ishiwatari, M.; Takehiro, S.; Hayashi, Y.; Nakajima, K.

2012-12-01

Recently, nearly 800 extrasolar planets have been detected. It seems that some of them present into habitable zone, in which planets can have ocean, and such planets rotate synchronously with their central stars. Ocean is necessary for life, and the circulation makes climate mild by heat transport on the earth. The earth is the only planet that has ocean in the solar system so that it has not been understood what oceanic circulation is like in another planets. The purpose of this study is prediction of oceanic circulation on extrasolar planets by using numerical simulation. As a first step, elementary consideration is made. The planet is almost entirely covered with ocean and whose rotation period corresponds with its orbital period. On synchronously rotating planets, the thermal contrast between day-hemisphere and night-hemisphere would be extreme. However, it may be lessend if there is significant zonal heat transport. The circulation in such conditions has not been known well. We performed a numerical experiment based on the linear shallow water equation, assuming that both the evaporation and the precipitation occur only on day-hemisphere (Noda et al., 2011). With these distributions of the evaporation and the precipitation, one may anticipate the circulation occurs in only day-hemisphere. However, the resulting calculation is characterized with zonally uniform zonal flow, which also covers night hemisphere. In addition, the intensity of the flow increases with time. That behavior can be understood by constructing asymptotic solution which is first degree in time. The importance of Coriolis force, which bends meridional flow to zonal flow, is identified. It is implied that, even when only day-hemisphere has the evaporation and precipitation, there may be significant amount of heat can be transported from the day-hemisphere to the night-hemisphere by the strong zonal flow. The growth of zonal flow would be stopped when the evaporation and the precipitation are balanced with mass transport in the bottom Ekman layer.

Investigations of the role of nonlinear couplings in structure formation and transport regulation in plasma turbulence

NASA Astrophysics Data System (ADS)

Holland, Christopher George

Studies of nonlinear couplings and dynamics in plasma turbulence are presented. Particular areas of focus are analytic studies of coherent structure formation in electron temperature gradient turbulence, measurement of nonlinear energy transfer in simulations of plasma turbulence, and bispectral analysis of experimental and computational data. The motivation for these works has been to develop and expand the existing theories of plasma transport, and verify the nonlinear predictions of those theories in simulation and experiment. In Chapter II, we study electromagnetic secondary instabilities of electron temperature gradient turbulence. The growth rate for zonal flow generation via modulational instability of electromagnetic ETG turbulence is calculated, as well as that for zonal (magnetic) field generation. In Chapter III, the stability and saturation of streamers in ETG turbulence is considered, and shown to depend sensitively upon geometry and the damping rates of the Kelvin-Helmholtz mode. Requirements for a credible theory of streamer transport are presented. In addition, a self-consistent model for interactions between ETG and ITG (ion temperature gradient) turbulence is presented. In Chapter IV, the nonlinear transfer of kinetic and internal energy is measured in simulations of plasma turbulence. The regulation of turbulence by radial decorrelation due to zonal flows and generation of zonal flows via the Reynolds stress are explicitly demonstrated, and shown to be symmetric facets of a single nonlinear process. Novel nonlinear saturation mechanisms for zonal flows are discussed. In Chapter V, measurements of fluctuation bicoherence in the edge of the DIII-D tokamak are presented. It is shown that the bicoherence increases transiently before a L-H transition, and decays to its initial value after the barrier has formed. The increase in bicoherence is localized to the region where the transport barrier forms, and shows strong coupling between well-separated frequencies. These results are qualitatively reproduced in a simple numerical "thought experiment," described in Chapter VI, which suggests that zonal flows may trigger the L-H transition.

Modeling Study of Planetary Waves in the Mesosphere Lower Thermosphere (MLT)

NASA Technical Reports Server (NTRS)

Mengel, J. G.; Mayr, H. g.; Drob, D.; Porter, H. S.; Hines, C. O.

2003-01-01

For comparison with measurements from the TIMED satellite and coordinated ground based observations, we present results from our Numerical Spectral Model (NSM) that incorporates the Doppler Spread Parameterization (Hines, 1997) for small-scale gravity waves (GWs). We discuss the planetary waves (PWs) that are purely generated by dynamical interactions, i.e., without explicitly specifying excitation sources related for example to tropospheric convection or topography. With tropospheric heating that reproduces the observed zonal jets near the tropopause and the accompanying reversal in the latitudinal temperature variation, which is conducive to baroclinic instability, long period PWs are produced that propagate up into the stratosphere to affect the wave driven equatorial oscillations (QBO and SAO) extending into the upper mesosphere. The PWs in the model that dominate higher up in the MLT region, however, are to a large extent produced by instabilities under the influence of the zonal circulation and temperature variations in the middle atmosphere and they are amplified by GW interactions. Three classes of PWs are generated there. (1) Rossby waves that slowly propagate westward but are carried by the zonal mean (m = 0) winds to produce eastward and westward propagating PWs respectively in the winter and summer hemispheres below 80 km. Depending on the zonal wave number and magnitudes of the zonal winds under the influence of the equatorial oscillations, the PWs typically have periods between 2 and 20 days and their horizontal wind amplitudes can exceed 40 m/s in the lower mesosphere. (2) Rossby gravity waves that propagate westward at low latitudes, having periods around 2 days for zonal wave numbers m = 2 to 4. (3) Eastward propagating equatorial Kelvin waves generated in the upper mesosphere with periods between 2 and 3 days for m = 1 & 2. The seasonal variations of the PWs reveal that the largest wind amplitudes tend to occur below 80 km in the winter hemisphere, but above that altitude in the summer hemisphere to approach magnitudes as large as 50 m/s.

Characteristics and Mechanisms of Zonal Oscillation of Western Pacific Subtropical High in Summer

NASA Astrophysics Data System (ADS)

Guan, W.; Ren, X.; Hu, H.

2017-12-01

The zonal oscillation of the western Pacific subtropical high (WPSH) influences the weather and climate over East Asia significantly. This study investigates the features and mechanisms of the zonal oscillation of the WPSH during summer on subseasonal time scales. The zonal oscillation index of the WPSH is defined by normalized subseasonal geopotential height anomaly at 500hPa averaged over the WPSH's western edge (110° - 140°E, 10° - 30°N). The index shows a predominant oscillation with a period of 10-40 days. Large positive index indicates a strong anticyclonic anomaly over East Asia and its coastal region south of 30°N at both 850hPa and 500hPa. The WPSH stretches more westward accompanied by warmer SST anomalies beneath the western edge of the WPSH. Meanwhile, above-normal precipitation is seen over the Yangtze-Huaihe river basin and below-normal precipitation over the south of the Yangtze River. Negative index suggests a more eastward position of WPSH. The anomalies in circulation and SST for negative index are almost the mirror image of those for the positive index. In early summer, the zonal shift of the WPSH is affected by both the East Asia/Pacific (EAP) teleconnection pattern and the Silk road pattern (SRP). The positive (negative) phase of the EAP pattern is characterized by a low-level anticyclonic (cyclonic) anomaly over the subtropical western Pacific, indicating the western extension (eastward retreat) of the WPSH. Comparing with the EAP pattern, the SRP forms an upper-level anticyclonic (cyclonic) anomaly in mid-latitudes of East Asia, and then leads to the westward (eastward) movement of the WPSH. In late summer, the zonal shift of the WPSH is mainly affected by the EAP pattern, because the EAP pattern in late summer is stronger than that in early summer. The zonal shift of the WPSH is also influenced by the subseasonal air-sea interaction locally. During the early stage of WPSH's westward stretch, the local SST anomaly in late summer is colder than that in early summer. This forms a more favorable condition for the increasing of local anticyclonic anomaly. Thus, the anticyclonic anomaly in late summer is stronger than that in early summer.

Portable Radiation Detectors

NASA Technical Reports Server (NTRS)

1997-01-01

Through a Small Business Innovation Research (SBIR) contract from Kennedy Space Center, General Pneumatics Corporation's Western Research Center satisfied a NASA need for a non-clogging Joule-Thomson cryostat to provide very low temperature cooling for various sensors. This NASA-supported cryostat development played a key part in the development of more portable high-purity geranium gamma-ray detectors. Such are necessary to discern between the radionuclides in medical, fuel, weapon, and waste materials. The outcome of the SBIR project is a cryostat that can cool gamma-ray detectors, without vibration, using compressed gas that can be stored compactly and indefinitely in a standby mode. General Pneumatics also produces custom J-T cryostats for other government, commercial and medical applications.

Isolation of Intact Chloroplasts from Euglena gracilis by Zonal Centrifugation 1

PubMed Central

Vasconcelos, Aurea; Pollack, Marilyn; Mendiola, Leticia R.; Hoffmann, H.-P.; Brown, D. H.; Price, C. A.

1971-01-01

Chloroplasts were separated from Euglena gracilis by zonal centrifugation at low speed in density gradients of Ficoll or dextran. The chloroplasts were intact by the criteria of ultrastructure and their content of ribulose diphosphate carboxylase and soluble protein. The chloroplasts also contained ribosomes and ribosomal RNA uncontaminated by the corresponding cytoplasmic particles. Images PMID:16657599

Fluidized bed selective pyrolysis of coal

DOEpatents

Shang, J.Y.; Cha, C.Y.; Merriam, N.W.

1992-12-15

The present invention discloses a process for the pyrolysis of coal which comprises the effective utilization of two zonal inclined fluidized beds, where said zones can be selectively controlled as to temperature and heating rate. The first zonal inclined fluidized bed serves as a dryer for crushed coal and additionally is controlled to selectively pyrolyze said coal producing substantially carbon dioxide for recycle use. The second zonal inclined fluidized bed further pyrolyses the coal to gaseous, liquid and char products under controlled temperature and heating rate zones designed to economically integrate the product mix. The gas and liquid products are recovered from the gaseous effluent stream while the char which remains can be further treated or utilized in a subsequent process step. 9 figs.

Fluidized bed selective pyrolysis of coal

DOEpatents

Shang, Jer Y.; Cha, Chang Y.; Merriam, Norman W.

1992-01-01

The present invention discloses a process for the pyrolysis of coal which comprises the effective utilization of two zonal inclined fluidized beds, where said zones can be selectively controlled as to temperature and heating rate. The first zonal inclined fluidized bed serves as a dryer for crushed coal and additionally is controlled to selectively pyrolyze said coal producing substantially carbon dioxide for recycle use. The second zonal inclined fluidized bed further pyrolyzes the coal to gaseous, liquid and char products under controlled temperature and heating rate zones designed to economically integrate the product mix. The gas and liquid products are recovered from the gaseous effluent stream while the char which remains can be further treated or utilized in a subsequent process step.

A comparison of the Stratospheric Aerosol and Gas Experiment II tropospheric water vapor to radiosonde measurements

NASA Technical Reports Server (NTRS)

Larsen, J. C.; Chiou, E. W.; Chu, W. P.; Mccormick, M. P.; Mcmaster, L. R.; Oltmans, S.; Rind, D.

1993-01-01

Results are presented of a comparison beteen observations of the upper-tropospheric water vapor data obtained from the Stratospheric Aerosol and Gas Experiment II (SAGE II) instrument and radiosonde observations for 1987 and radiosonde-based climatologies. Colocated SAGE II-radiosonde measurement pairs are compared individually and in a zonal mean sense. A straight comparison of monthly zonal means between SAGE II and radiosondes for 1987 and Global Atmospheric Statistics (1963-1973) indicates that the clear-sky SAGE II climatology is approximately half the level of clear/cloudy sky of both radiosonde climatologies. Annual zonal means calculated from the set of profile pairs again showed SAGE II to be significantly drier in many altitude bands.

Direct phase measurement in zonal wavefront reconstruction using multidither coherent optical adaptive technique.

PubMed

Liu, Rui; Milkie, Daniel E; Kerlin, Aaron; MacLennan, Bryan; Ji, Na

2014-01-27

In traditional zonal wavefront sensing for adaptive optics, after local wavefront gradients are obtained, the entire wavefront can be calculated by assuming that the wavefront is a continuous surface. Such an approach will lead to sub-optimal performance in reconstructing wavefronts which are either discontinuous or undersampled by the zonal wavefront sensor. Here, we report a new method to reconstruct the wavefront by directly measuring local wavefront phases in parallel using multidither coherent optical adaptive technique. This method determines the relative phases of each pupil segment independently, and thus produces an accurate wavefront for even discontinuous wavefronts. We implemented this method in an adaptive optical two-photon fluorescence microscopy and demonstrated its superior performance in correcting large or discontinuous aberrations.

Zonal drift velocities of the ionospheric plasma bubbles over brazilian region using oi630nm airglow digital images

NASA Astrophysics Data System (ADS)

Arruda, D. C. S.; Sobral, J. H. A.; Abdu, M. A.; Castilho, V. M.; Takahashi, H.

The zonal drift velocities of the ionospheric plasma bubbles over the Brazilian region are analyzed in this study that is based on OI630nm airglow digital images. These digital images were obtained by an all-sky imager system between October 1998 and August 2000, at Cachoeira Paulista (22.5°S, 45°W), a low latitude region. In this period, 138 nights of OI 630 nm airglow experiments were carried out of which 30 nights detected the ionospheric plasma bubbles. These 30 nights correspond to magnetically quiet days (ΣK_P<24+) and were grouped according approximately to their season. KEY WORDS: Imager System, Ionospheric Plasma Bubbles, Zonal drift velocities, OI630nm.

Zonal wavefront sensing using a grating array printed on a polyester film

NASA Astrophysics Data System (ADS)

Pathak, Biswajit; Kumar, Suraj; Boruah, Bosanta R.

2015-12-01

In this paper, we describe the development of a zonal wavefront sensor that comprises an array of binary diffraction gratings realized on a transparent sheet (i.e., polyester film) followed by a focusing lens and a camera. The sensor works in a manner similar to that of a Shack-Hartmann wavefront sensor. The fabrication of the array of gratings is immune to certain issues associated with the fabrication of the lenslet array which is commonly used in zonal wavefront sensing. Besides the sensing method offers several important advantages such as flexible dynamic range, easy configurability, and option to enhance the sensing frame rate. Here, we have demonstrated the working of the proposed sensor using a proof-of-principle experimental arrangement.

Modeling the zonal disintegration of rocks near deep level tunnels by gradient internal variable continuous phase transition theory

NASA Astrophysics Data System (ADS)

Haoxiang, Chen; Qi, Chengzhi; Peng, Liu; Kairui, Li; Aifantis, Elias C.

2015-12-01

The occurrence of alternating damage zones surrounding underground openings (commonly known as zonal disintegration) is treated as a "far from thermodynamic equilibrium" dynamical process or a nonlinear continuous phase transition phenomenon. The approach of internal variable gradient theory with diffusive transport, which may be viewed as a subclass of Landau's phase transition theory, is adopted. The order parameter is identified with an irreversible strain quantity, the gradient of which enters into the expression for the free energy of the rock system. The gradient term stabilizes the material behavior in the post-softening regime, where zonal disintegration occurs. The results of a simplified linearized analysis are confirmed by the numerical solution of the nonlinear problem.

Linear simulation of the stationary eddies in a GCM. II - The 'Mountain' model

NASA Technical Reports Server (NTRS)

Nigam, Sumant; Held, Isaac M.; Lyons, Steven W.

1988-01-01

Linear stationary wave theory is used to account for zonal asymmetries of the winter-averaged tropospheric circulation obtained in a GCM. The eddy zonal velocity field in the upper troposphere indicates that the orographic and thermal plus transient contributions are nearly equal in amplitude, while the eddy meridional velocity field (which is dominated by shorter zonal scales) shows the orographic contribution to be dominant. The two contributions are found to be roughly in phase over the east Asian coast, and they contribute roughly equal amounts to the low level Siberian high. Results indicate that the 300 mb extratropical response to tropical forcing reaches 50 gpm over Alaska, and that the responses to sensible heating and lower tropospheric transients are strongly anticorrelated.

The Variability of the Horizontal Circulation in the Troposphere and Stratosphere: A Comparison

NASA Technical Reports Server (NTRS)

Perlwitz, Judith; Graf, Hans-F.; Hansem, James E. (Technical Monitor)

2001-01-01

The variability of the horizontal circulation in the stratosphere and troposphere of the Northern Hemisphere (NH) is compared by using various approaches. Spatial degrees of freedom (dof) on different time scales were derived. Modes of variability were computed in geopotential height fields at the tropospheric and stratospheric pressure levels by applying multivariate statistical approaches. Features of the spatial and temporal variability of the winterly zonal wind were studied with the help of recurrence and persistence analyses. The geopotential height and zonally-averaged zonal wind at the 50-, 500- and 1000-hPa level are used to investigate the behavior of the horizontal circulation in the lower stratosphere, mid-troposphere and at the near surface level, respectively. It is illustrated that the features of the variability of the horizontal circulation are very similar in the mid-troposphere and at the near surface level. Due to the filtering of tropospheric disturbances by the stratospheric and upper tropospheric zonal mean flow, the variability of the stratospheric circulation exhibits less spatial complexity than the circulation at tropospheric pressure levels. There exist enormous differences in the number of degrees of freedom (or free variability modes) between both atmospheric layers. Results of the analyses clearly show that the concept of a zonally symmetric AO with a simple structure in the troposphere similar to the one in the stratosphere is not valid. It is concluded that the spatially filtered climate change signal can be detected earlier in the stratosphere than in the mid-troposphere or at the near surface level.

The role of the winter residual circulation in the summer mesopause regions in WACCM

NASA Astrophysics Data System (ADS)

Sanne Kuilman, Maartje; Karlsson, Bodil

2018-03-01

High winter planetary wave activity warms the summer polar mesopause via a link between the two hemispheres. Complex wave-mean-flow interactions take place on a global scale, involving sharpening and weakening of the summer zonal flow. Changes in the wind shear occasionally generate flow instabilities. Additionally, an altering zonal wind modifies the breaking of vertically propagating gravity waves. A crucial component for changes in the summer zonal flow is the equatorial temperature, as it modifies latitudinal gradients. Since several mechanisms drive variability in the summer zonal flow, it can be hard to distinguish which one is dominant. In the mechanism coined interhemispheric coupling, the mesospheric zonal flow is suggested to be a key player for how the summer polar mesosphere responds to planetary wave activity in the winter hemisphere. We here use the Whole Atmosphere Community Climate Model (WACCM) to investigate the role of the summer stratosphere in shaping the conditions of the summer polar mesosphere. Using composite analyses, we show that in the absence of an anomalous summer mesospheric temperature gradient between the equator and the polar region, weak planetary wave forcing in the winter would lead to a warming of the summer mesosphere region instead of a cooling, and vice versa. This is opposing the temperature signal of the interhemispheric coupling that takes place in the mesosphere, in which a cold and calm winter stratosphere goes together with a cold summer mesopause. We hereby strengthen the evidence that the variability in the summer mesopause region is mainly driven by changes in the summer mesosphere rather than in the summer stratosphere.

Spatial-temporal dynamics of NDVI and Chl-a concentration from 1998 to 2009 in the East coastal zone of China: integrating terrestrial and oceanic components.

PubMed

Hou, Xiyong; Li, Mingjie; Gao, Meng; Yu, Liangju; Bi, Xiaoli

2013-01-01

Annual normalized difference vegetation index (NDVI) and chlorophyll-a (Chl-a) concentration are the most important large-scale indicators of terrestrial and oceanic ecosystem net primary productivity. In this paper, the Sea-viewing Wide Field-of-view Sensor level 3 standard mapped image annual products from 1998 to 2009 are used to study the spatial-temporal characters of terrestrial NDVI and oceanic Chl-a concentration on two sides of the coastline of China by using the methods of mean value (M), coefficient of variation (CV), the slope of unary linear regression model (Slope), and the Hurst index (H). In detail, we researched and analyzed the spatial-temporal dynamics, the longitudinal zonality and latitudinal zonality, the direction, intensity, and persistency of historical changes. The results showed that: (1) spatial patterns of M and CV between NDVI and Chl-a concentration from 1998 to 2009 were very different. The dynamic variation of terrestrial NDVI was much mild, while the variation of oceanic Chl-a concentration was relatively much larger; (2) distinct longitudinal zonality was found for Chl-a concentration and NDVI due to their hypersensitivity to the distance to shoreline, and strong latitudinal zonality existed for Chl-a concentration while terrestrial NDVI had a very weak latitudinal zonality; (3) overall, the NDVI showed a slight decreasing trend while the Chl-a concentration showed a significant increasing trend in the past 12 years, and both of them exhibit strong self-similarity and long-range dependence which indicates opposite future trends between land and ocean.

3D shape reconstruction of specular surfaces by using phase measuring deflectometry

NASA Astrophysics Data System (ADS)

Zhou, Tian; Chen, Kun; Wei, Haoyun; Li, Yan

2016-10-01

The existing estimation methods for recovering height information from surface gradient are mainly divided into Modal and Zonal techniques. Since specular surfaces used in the industry always have complex and large areas, considerations must be given to both the improvement of measurement accuracy and the acceleration of on-line processing speed, which beyond the capacity of existing estimations. Incorporating the Modal and Zonal approaches into a unifying scheme, we introduce an improved 3D shape reconstruction version of specular surfaces based on Phase Measuring Deflectometry in this paper. The Modal estimation is firstly implemented to derive the coarse height information of the measured surface as initial iteration values. Then the real shape can be recovered utilizing a modified Zonal wave-front reconstruction algorithm. By combining the advantages of Modal and Zonal estimations, the proposed method simultaneously achieves consistently high accuracy and dramatically rapid convergence. Moreover, the iterative process based on an advanced successive overrelaxation technique shows a consistent rejection of measurement errors, guaranteeing the stability and robustness in practical applications. Both simulation and experimentally measurement demonstrate the validity and efficiency of the proposed improved method. According to the experimental result, the computation time decreases approximately 74.92% in contrast to the Zonal estimation and the surface error is about 6.68 μm with reconstruction points of 391×529 pixels of an experimentally measured sphere mirror. In general, this method can be conducted with fast convergence speed and high accuracy, providing an efficient, stable and real-time approach for the shape reconstruction of specular surfaces in practical situations.

Educational Change Leadership through a New Zonal Theory Lens: Using Mathematics Curriculum Change as the Example

ERIC Educational Resources Information Center

Lamb, Janeen; Branson, Christopher M.

2015-01-01

This paper outlines actions that educational change leaders can take to better meet their curriculum change obligations and responsibilities. In order to do this we extend Vygotsky's (1978) zonal theory and its many extensions and elaborations by positioning educational change leadership within this theory. We rename the zones to Zone of Principal…

Cryptic speciation reversal in the Etheostoma zonale (Teleostei: Percidae) species group, with an examination of the effect of recombination and introgression on species tree inference.

PubMed

Halas, Dominik; Simons, Andrew M

2014-01-01

Mitochondrial and nuclear introgression among closely related taxa can greatly complicate the process of determining their phylogenetic relationships. In the Central Highlands of North America, many fish taxa have undergone introgression; in this study, we demonstrate the existence of an unusual introgression event in the Etheostoma zonale species group. We used one mitochondrial and seven nuclear loci to determine the relationships of the taxa within the E. zonale group, and their degree of differentiation. We found evidence of multiple divergent populations within each species; much of the divergence within species has taken place during the Pleistocene. We also found evidence of a previously unknown cryptic species in the Upper Tennessee River which diverged from the remainder of the group during the Pliocene, and has undergone mitochondrial and nuclear introgression with E. zonale, in an apparent process of speciation reversal. We examined the effects that using varying types of recombination tests to eliminate the signal of recombination from nuclear loci would have on the phylogenetic placement of this introgressed lineage in our species tree analyses. Copyright © 2013 Elsevier Inc. All rights reserved.

Nonmigrating tidal modulation of the equatorial thermosphere and ionosphere anomaly

NASA Astrophysics Data System (ADS)

Lei, Jiuhou; Thayer, Jeffrey P.; Wang, Wenbin; Yue, Jia; Dou, Xiankang

2014-04-01

The modulation of nonmigrating tides on both the ionospheric equatorial ionization anomaly (EIA) and the equatorial thermosphere anomaly (ETA) is investigated on the basis of simulations from the Thermosphere Ionosphere Mesosphere Electrodynamics General Circulation Model (TIME-GCM). Our simulations demonstrate the distinct features of the EIA and ETA seen in observations after the inclusion of field-aligned ion drag in the model. Both the EIA and the ETA in the constant local time frame display an obvious zonal wave-4 structure associated with the modulation of nonmigrating tides. However, the modeled EIA and ETA show a primary zonal wave-1 structure when only the migrating tides are specified at the model lower boundary. Our simulations reveal that the zonal wave-4 structure of the ETA under both low and high solar activity conditions is mainly caused by the direct response of the upper thermosphere to the diurnal eastward wave number 3 and semidiurnal eastward wave number 2 nonmigrating tides from the lower atmosphere. There is a minor contribution from the ion-neutral coupling. The zonal wave-4 structure of the EIA is also caused by these nonmigrating tides but through the modulation of the neutral wind dynamo.

A Simulation Model for Drift Resistive Ballooning Turbulence Examining the Influence of Self-consistent Zonal Flows

NASA Astrophysics Data System (ADS)

Cohen, Bruce; Umansky, Maxim; Joseph, Ilon

2015-11-01

Progress is reported on including self-consistent zonal flows in simulations of drift-resistive ballooning turbulence using the BOUT + + framework. Previous published work addressed the simulation of L-mode edge turbulence in realistic single-null tokamak geometry using the BOUT three-dimensional fluid code that solves Braginskii-based fluid equations. The effects of imposed sheared ExB poloidal rotation were included, with a static radial electric field fitted to experimental data. In new work our goal is to include the self-consistent effects on the radial electric field driven by the microturbulence, which contributes to the sheared ExB poloidal rotation (zonal flow generation). We describe a model for including self-consistent zonal flows and an algorithm for maintaining underlying plasma profiles to enable the simulation of steady-state turbulence. We examine the role of Braginskii viscous forces in providing necessary dissipation when including axisymmetric perturbations. We also report on some of the numerical difficulties associated with including the axisymmetric component of the fluctuating fields. This work was performed under the auspices of the U.S. Department of Energy under contract DE-AC52-07NA27344 at the Lawrence Livermore National Laboratory (LLNL-ABS-674950).

Computation of transonic separated wing flows using an Euler/Navier-Stokes zonal approach

NASA Technical Reports Server (NTRS)

Kaynak, Uenver; Holst, Terry L.; Cantwell, Brian J.

1986-01-01

A computer program called Transonic Navier Stokes (TNS) has been developed which solves the Euler/Navier-Stokes equations around wings using a zonal grid approach. In the present zonal scheme, the physical domain of interest is divided into several subdomains called zones and the governing equations are solved interactively. The advantages of the Zonal Grid approach are as follows: (1) the grid for any subdomain can be generated easily; (2) grids can be, in a sense, adapted to the solution; (3) different equation sets can be used in different zones; and, (4) this approach allows for a convenient data base organization scheme. Using this code, separated flows on a NACA 0012 section wing and on the NASA Ames WING C have been computed. First, the effects of turbulence and artificial dissipation models incorporated into the code are assessed by comparing the TNS results with other CFD codes and experiments. Then a series of flow cases is described where data are available. The computed results, including cases with shock-induced separation, are in good agreement with experimental data. Finally, some futuristic cases are presented to demonstrate the abilities of the code for massively separated cases which do not have experimental data.

Acquisition of physical dormancy and ontogeny of the micropyle–water-gap complex in developing seeds of Geranium carolinianum (Geraniaceae)

PubMed Central

Gama-Arachchige, N. S.; Baskin, J. M.; Geneve, R. L.; Baskin, C. C.

2011-01-01

Background and Aims The ‘hinged valve gap’ has been previously identified as the initial site of water entry (i.e. water gap) in physically dormant (PY) seeds of Geranium carolinianum (Geraniaceae). However, neither the ontogeny of the hinged valve gap nor acquisition of PY by seeds of Geraniaceae has been studied previously. The aims of the present study were to investigate the physiological events related to acquisition of PY and the ontogeny of the hinged valve gap and seed coat of G. carolinianum. Methods Seeds of G. carolinianum were studied from the ovule stage until dispersal. The developmental stages of acquisition of germinability, physiological maturity and PY were determined by seed measurement, germination and imbibition experiments using intact seeds and isolated embryos of both fresh and slow-dried seeds. Ontogeny of the seed coat and water gap was studied using light microscopy. Key Results Developing seeds achieved germinability, physiological maturity and PY on days 9, 14 and 20 after pollination (DAP), respectively. The critical moisture content of seeds on acquisition of PY was 11 %. Slow-drying caused the stage of acquisition of PY to shift from 20 to 13 DAP. Greater extent of cell division and differentiation at the micropyle, water gap and chalaza than at the rest of the seed coat resulted in particular anatomical features. Palisade and subpalisade cells of varying forms developed in these sites. A clear demarcation between the water gap and micropyle is not evident due to their close proximity. Conclusions Acquisition of PY in seeds of G. carolinianum occurs after physiological maturity and is triggered by maturation drying. The micropyle and water gap cannot be considered as two separate entities, and thus it is more appropriate to consider them together as a ‘micropyle–water-gap complex’. PMID:21546433

Defensive strategies in Geranium sylvaticum, Part 2: Roles of water-soluble tannins, flavonoids and phenolic acids against natural enemies.

PubMed

Tuominen, Anu

2013-11-01

Geranium sylvaticum is a common herbaceous plant in Fennoscandia, which has a unique phenolic composition. Ellagitannins, proanthocyanidins, galloylglucoses, gallotannins, galloyl quinic acids and flavonoids possess variable distribution in its different organs. These phenolic compounds are thought to have an important role in plant-herbivore interactions. The aim of this study was to quantify these different water-soluble phenolic compounds and measure the biological activity of the eight organs of G. sylvaticum. Compounds were characterized and quantified using HPLC-DAD/MS, in addition, total proanthocyanidins were determined by BuOH-HCl assay and total phenolics by the Folin-Ciocalteau method. Two in vitro biological activity measurements were used: the prooxidant activity was measured by the browning assay and antioxidant activity by the 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging assay. Organ extracts were fractionated using column chromatography on Sephadex LH-20 and the activities of fractions was similarly measured to evaluate which polyphenol groups contributed the most to the biological activity of each organ. The data on the activity of fractions were examined by multivariate data analysis. The water-soluble extracts of leaves and pistils, which contained over 30% of the dry weight as ellagitannins, showed the highest pro-oxidant activity among the organ extracts. Fraction analysis revealed that flavonoids and galloyl quinic acids also exhibited high pro-oxidant activity. In contrast, the most antioxidant active organ extracts were those of the main roots and hairy roots that contained high amounts of proanthocyanidins in addition to ellagitannins. Analysis of the fractions showed that especially ellagitannins and galloyl quinic acids have high antioxidant activity. We conclude that G. sylvaticum allocates a significant amount of tannins in those plant parts that are important to the fitness of the plant and susceptible to natural enemies, i.e. pistil and leaf tannins protect against insect herbivores and root tannins against soil pathogens. Copyright © 2013 Elsevier Ltd. All rights reserved.

Role of human gut microbiota metabolism in the anti-inflammatory effect of traditionally used ellagitannin-rich plant materials.

PubMed

Piwowarski, Jakub P; Granica, Sebastian; Zwierzyńska, Marta; Stefańska, Joanna; Schopohl, Patrick; Melzig, Matthias F; Kiss, Anna K

2014-08-08

Ellagitannin-rich plant materials are widely used in traditional medicine as effective, internally used anti-inflammatory agents. Due to the not well-established bioavailability of ellagitannins, the mechanisms of observed therapeutic effects following oral administration still remain unclear. The aim of the study was to evaluate if selected ellagitannin-rich plant materials could be the source of bioavailable gut microbiota metabolites, i.e. urolithins, together with determination of the anti-inflammatory activity of the metabolites produced on the THP-1 cell line derived macrophages model. The formation of urolithins was determined by ex vivo incubation of human fecal samples with aqueous extracts from selected plant materials. The anti-inflammatory activity study of metabolites was determined on PMA differentiated, IFN-γ and LPS stimulated, human THP-1 cell line-derived macrophages. The formation of urolithin A, B and C by human gut microbiota was established for aqueous extracts from Filipendula ulmaria (L.) Maxim. herb (Ph. Eur.), Geranium pratense L. herb, Geranium robertianum L. herb, Geum urbanum L. root and rhizome, Lythrum salicaria L. herb (Ph. Eur.), Potentilla anserina L. herb, Potentilla erecta (L.) Raeusch rhizome (Ph. Eur.), Quercus robur L. bark (Ph. Eur.), Rubus idaeus L. leaf, Rubus fruticosus L. and pure ellagitannin vescalagin. Significant inhibition of TNF-α production was determined for all urolithins, while for the most potent urolithin A inhibition was observed at nanomolar concentrations (at 0.625 μM 29.2±6.4% of inhibition). Urolithin C was the only compound inhibiting IL-6 production (at 0.625 μM 13.9±2.2% of inhibition). The data obtained clearly indicate that in the case of peroral use of the examined ellagitannin-rich plant materials the bioactivity of gut microbiota metabolites, i.e. urolithins, has to be taken under consideration. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Frequency-dependent pollinator discrimination acts against female plants in the gynodioecious Geranium maculatum.

PubMed

Van Etten, Megan L; Chang, Shu-Mei

2014-12-01

Gynodioecy, the co-occurrence of female and hermaphroditic individuals, is thought to be an intermediate step between hermaphroditism and separate sexes, a major transition in flowering plants. Because retaining females in a population requires that they have increased seed fitness (to compensate for the lack of pollen fitness), factors that affect seed fitness are of great importance to the evolution of this mating system and have often been studied. However, factors negatively affecting female fitness are equally important and have been largely neglected. One such factor stems from female flowers being less attractive to insects than hermaphrodite flowers, thereby decreasing their relative fitness. To test the severity and consequences of this type of pollinator discrimination in Geranium maculatum, experimental populations with the range of sex ratios observed in nature were created, ranging from 13 % to 42 % females. Pollinators were observed in order to measure the strength of discrimination, and pollen deposition and seed production of both sexes were measured to determine the fitness consequences of this discrimination. Additionally a comparison was made across the sex ratios to determine whether discrimination was frequency-dependent. It was found that female flowers, on average, were visited at half of the rate of hermaphrodite flowers, which decreased their pollen receipt and seed production. Additionally, females were most discriminated against when rare, due to both changes in the pollinators' behaviour and a shift in pollinator composition. The results suggest that pollinator discrimination negatively affects females' relative fitness when they are rare. Thus, the initial spread of females in a population, the first step in the evolution of gynodioecy, may be made more difficult due to pollinator discrimination. © The Author 2014. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Evaluation of the Antidiabetic Activity and Chemical Composition of Geranium collinum Root Extracts-Computational and Experimental Investigations.

PubMed

Numonov, Sodik; Edirs, Salamet; Bobakulov, Khayrulla; Qureshi, Muhammad Nasimullah; Bozorov, Khurshed; Sharopov, Farukh; Setzer, William N; Zhao, Haiqing; Habasi, Maidina; Sharofova, Mizhgona; Aisa, Haji Akber

2017-06-13

The root of Geranium collinum Steph is known in Tajik traditional medicine for its hepatoprotective, antioxidant, and anti-inflammatory therapeutic effects. The present study was conducted to evaluate of potential antidiabetic, antioxidant activities, total polyphenolic and flavonoid content from the different extracts (aqueous, aqueous-ethanolic) and individual compounds isolated of the root parts of G. collinum . The 50% aqueous-ethanolic extract possesses potent antidiabetic activity, with IC 50 values of 0.10 μg/mL and 0.09 μg/mL for the enzymes protein-tyrosine phosphatase (1B PTP-1B) and α-glucosidase, respectively. Phytochemical investigations of the 50% aqueous-ethanolic extract of G. collinum , led to the isolation of ten pure compounds identified as 3,3',4,4'-tetra- O -methylellagic acid ( 1 ), 3,3'-di- O -methylellagic acid ( 2 ), quercetin ( 3 ), caffeic acid ( 4 ), (+)-catechin ( 5 ), (-)-epicatechin ( 6 ), (-)-epigallocatechin ( 7 ), gallic acid ( 8 ), β-sitosterol-3- O -β-d-glucopyranoside ( 9 ), and corilagin ( 10 ). Their structures were determined based on 1D and 2D NMR and mass spectrometric analyses. Three isolated compounds exhibited strong inhibitory activity against PTP-1B, with IC 50 values below 0.9 μg/mL, more effective than the positive control (1.46 μg/mL). Molecular docking analysis suggests polyphenolic compounds such as corilagin, catechin and caffeic acid inhibit PTP-1B and β-sitosterol-3- O -β-d-gluco-pyranoside inhibits α-glucosidase. The experimental results suggest that the biological activity of G. collinum is related to its polyphenol contents. The results are also in agreement with computational investigations. Furthermore, the potent antidiabetic activity of the 50% aqueous-ethanolic extract from G. collinum shows promise for its future application in medicine. To the best of our knowledge, we hereby report, for the first time, the antidiabetic activity of G. collinum.

Zonal wavefront sensing with enhanced spatial resolution.

PubMed

Pathak, Biswajit; Boruah, Bosanta R

2016-12-01

In this Letter, we introduce a scheme to enhance the spatial resolution of a zonal wavefront sensor. The zonal wavefront sensor comprises an array of binary gratings implemented by a ferroelectric spatial light modulator (FLCSLM) followed by a lens, in lieu of the array of lenses in the Shack-Hartmann wavefront sensor. We show that the fast response of the FLCSLM device facilitates quick display of several laterally shifted binary grating patterns, and the programmability of the device enables simultaneous capturing of each focal spot array. This eventually leads to a wavefront estimation with an enhanced spatial resolution without much sacrifice on the sensor frame rate, thus making the scheme suitable for high spatial resolution measurement of transient wavefronts. We present experimental and numerical simulation results to demonstrate the importance of the proposed wavefront sensing scheme.

Venus: Atmospheric motion and structure from Mariner 10 pictures

USGS Publications Warehouse

Murray, B.C.; Belton, M.J.S.; Danielson, G. Edward; Davies, M.E.; Gault, D.; Hapke, B.; O'Leary, B.; Strom, R.G.; Suomi, V.; Trask, N.

1974-01-01

The Mariner 10 television cameras imaged the planet Venus in the visible and near ultraviolet for a period of 8 days at resolutions ranging from 100 meters to 130 kilometers. The general pattern of the atmospheric circulation in the upper tropospheric/lower stratospheric region is displayed in the pictures. Atmospheric flow is symmetrical between north and south hemispheres. The equatorial motions are zonal (east-west) at approximately 100 meters per second, consistent with the previously inferred 4-day retrograde rotation. Angular velocity increases with latitude. The subsolar region, and the region downwind from it, show evidence of large-scale convection that persists in spite of the main zonal motion. Dynamical interaction between the zonal motion and the relatively stationary region of convection is evidenced by bowlike waves.

Statistical properties of Charney-Hasegawa-Mima zonal flows

DOE Office of Scientific and Technical Information (OSTI.GOV)

Anderson, Johan, E-mail: anderson.johan@gmail.com; Botha, G. J. J.

2015-05-15

A theoretical interpretation of numerically generated probability density functions (PDFs) of intermittent plasma transport events in unforced zonal flows is provided within the Charney-Hasegawa-Mima (CHM) model. The governing equation is solved numerically with various prescribed density gradients that are designed to produce different configurations of parallel and anti-parallel streams. Long-lasting vortices form whose flow is governed by the zonal streams. It is found that the numerically generated PDFs can be matched with analytical predictions of PDFs based on the instanton method by removing the autocorrelations from the time series. In many instances, the statistics generated by the CHM dynamics relaxesmore » to Gaussian distributions for both the electrostatic and vorticity perturbations, whereas in areas with strong nonlinear interactions it is found that the PDFs are exponentially distributed.« less

Zonal wavefront sensing using a grating array printed on a polyester film

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pathak, Biswajit; Boruah, Bosanta R., E-mail: brboruah@iitg.ernet.in; Kumar, Suraj

2015-12-15

In this paper, we describe the development of a zonal wavefront sensor that comprises an array of binary diffraction gratings realized on a transparent sheet (i.e., polyester film) followed by a focusing lens and a camera. The sensor works in a manner similar to that of a Shack-Hartmann wavefront sensor. The fabrication of the array of gratings is immune to certain issues associated with the fabrication of the lenslet array which is commonly used in zonal wavefront sensing. Besides the sensing method offers several important advantages such as flexible dynamic range, easy configurability, and option to enhance the sensing framemore » rate. Here, we have demonstrated the working of the proposed sensor using a proof-of-principle experimental arrangement.« less

Cloud level winds from UV and IR images obtained by VMC onboard Venus Express

NASA Astrophysics Data System (ADS)

Khatuntsev, Igor; Patsaeva, Marina; Titov, Dmitri; Ignatiev, Nikolay; Turin, Alexander; Bertaux, Jean-Loup

2017-04-01

During eight years Venus Monitoring Camera (VMC) [1] onboard the Venus Express orbiter has observed the upper cloud layer of Venus. The largest set of images was obtained in the UV (365 nm), visible (513 nm) and two infrared channels - 965 nm and 1010 nm. The UV dayside images were used to study the atmospheric circulation at the Venus cloud tops [2], [3]. Mean zonal and meridional profiles of winds and their variability were derived from cloud tracking of UV images. In low latitudes the mean retrograde zonal wind at the cloud top (67±2 km) is about 95 m/s with a maximum of about 102 m/s at 40-50°S. Poleward from 50°S the zonal wind quickly fades out with latitude. The mean poleward meridional wind slowly increases from zero value at the equator to about 10 m/s at 50°S. Poleward from this latitude, the absolute value of the meridional component monotonically decreases to zero at the pole. The VMC observations suggest clear diurnal signature in the wind field. They also indicate a long term trend for the zonal wind speed at low latitudes to increase from 85 m/s in the beginning of the mission to 110 m/s by the middle of 2012. The trend was explained by influence of the surface topography on the zonal flow [4]. Cloud features tracking in the IR images provided information about winds in the middle cloud deck (55±4 km). In the low and middle latitudes (5-65°S) the IR mean retrograde zonal velocity is about 68-70 m/s. In contrast to poleward flow at the cloud tops, equatorward motions dominate in the middle cloud with maximum speed of 5.8±1.2 m/s at latitude 15°S. The meridional speed slowly decreases to 0 at 65-70°S. At low latitudes the zonal and meridional speed demonstrate long term variations. Following [4] we explain the observed long term trend of zonal and meridional components by the influence of surface topography of highland region Aphrodite Terra on dynamic processes in the middle cloud deck through gravity waves. Acknowledgements: I.V. Khatuntsev, M.V. Patsaeva, N.I. Ignatiev, J.-L. Bertaux were supported by the Ministry of Education and Science of Russian Federation grant 14.W03.31.0017. References: [1] Markiewicz W. J. et al.: Venus Monitoring Camera for Venus Express // Planet. Space Sci., 55(12), 1701-1711. doi:10.1016/j.pss.2007.01.004, 2007. [2] Khatuntsev I.V. et al.: Cloud level winds from the Venus Express Monitoring Camera imaging // Icarus, 226, 140-158. 2013. [3] Patsaeva M.V. et al.: The relationship between mesoscale circulation and cloud morphology at the upper cloud level of Venus from VMC/Venus Express // Planet. Space Sci., 113(08), 100-108, doi:10.1016/j.pss.2015.01.013, 2015. [4] Bertaux J.-L. et al.: Influence of Venus topography on the zonal wind and UV albedo at cloud top level: The role of stationary gravity waves // J. Geophys. Res. Planets, 121, 1087-1101, doi:10.1002/2015JE004958, 2016.

Apparent Resistivity and Estimated Interaction Potential of Surface Water and Groundwater along Selected Canals and Streams in the Elkhorn-Loup Model Study Area, North-Central Nebraska, 2006-07

USGS Publications Warehouse

Teeple, Andrew; Vrabel, Joseph; Kress, Wade H.; Cannia, James C.

2009-01-01

In 2005, the State of Nebraska adopted new legislation that in part requires local Natural Resources Districts to include the effect of groundwater use on surface-water systems in their groundwater management plan. In response the U.S. Geological Survey, in cooperation with the Upper Elkhorn, Lower Elkhorn, Upper Loup, Lower Loup, Middle Niobrara, Lower Niobrara, Lewis and Clark, and Lower Platte North Natural Resources Districts, did a study during 2006-07 to investigate the surface-water and groundwater interaction within a 79,800-square-kilometer area in north-central Nebraska. To determine how streambed materials affect surface-water and groundwater interaction, surface geophysical and lithologic data were integrated at four sites to characterize the hydrogeologic conditions within the study area. Frequency-domain electromagnetic and waterborne direct- current resistivity profiles were collected to map the near-surface hydrogeologic conditions along sections of Ainsworth Canal near Ainsworth, Nebraska; Mirdan and Geranium Canals near Ord, Nebraska; North Loup River near Ord, Nebraska; and Middle Loup River near Thedford, Nebraska. Lithologic data were collected from test holes at each site to aid interpretation of the geophysical data. Geostatistical analysis incorporating the spatial variability of resistivity was used to account for the effect of lithologic heterogeneity on effective hydraulic permeability. The geostatistical analysis and lithologic data descriptions were used to make an interpretation of the hydrogeologic system and derive estimates of surface-water/groundwater interaction potential within the canals and streambeds. The estimated interaction potential at the Ainsworth Canal site and the Mirdan and Geranium Canal site is generally low to moderately low. The sediment textures at nearby test holes typically were silt and clay and fine-to-medium sand. The apparent resistivity values for these sites ranged from 2 to 120 ohm-meters. The vertical and horizontal variability of the apparent resistivity data were consistently low. Low resistive variability indicates little lithologic heterogeneity for either canal site. The surface-water/groundwater interaction-potential estimates are in agreement with the narrow frequency distribution of resistivity, low apparent resistivities, low spatial heterogeneity, and test-hole grain-size ranges. The estimated surface-water/groundwater interaction potential at the North Loup and Middle Loup River sites is moderate to moderately high. The sediment textures at nearby test holes were predominantly fine, medium, and coarse sand with some silt and silty to sandy clay. The apparent resistivity values for these sites ranged from 34 to 1,338 ohm-meters. The vertical variability of the resistivity data was moderately high. The horizontal variability at these sites is low to moderately low. The higher resistive variability at these sites indicates generally greater lithologic heterogeneity than at either the Ainsworth Canal site or the Mirdan and Geranium Canal site. The surface-water/groundwater interaction-potential estimates are in agreement with the generally moderate to high apparent resistivity, the greater spatial heterogeneity, and the variable lithologic texture. A higher interaction potential as compared to the canal sites is expected because of the higher subsurface resistivity and greater lithologic heterogeneity.

Shallow water simulations of Saturn's giant storms at different latitudes

NASA Astrophysics Data System (ADS)

García-Melendo, E.; Sánchez-Lavega, A.

2017-04-01

Shallow water simulations are used to present a unified study of three major storms on Saturn (nicknamed as Great White Spots, GWS) at different latitudes, polar (1960), equatorial (1990), and mid-latitude (2010) (Sánchez-Lavega, 2004; Sánchez-Lavega et al., 2011). In our model, the three GWS are initiated by introducing a Gaussian function pulse at the latitude of the observed phenomena with controlled horizontal size and amplitude. This function represents the convective source that has been observed to trigger the storm. A growing disturbance forms when the pulse reacts to ambient winds, expanding zonally along the latitude band of the considered domain. We then compare the modeled potential vorticity with the cloud field, adjusting the model parameters to visually get the closest aspect between simulations and observations. Simulations of the 2010 GWS (planetographic latitude ∼+40º, zonal velocity of the source ∼-30 m s-1) indicate that the Coriolis forces and the wind profile structure shape the disturbance generating, as observed, a long region to the east of the convective source with a high speed peripheral anticyclonic circulation, and a long-lived anticyclonic compact vortex accompanied by strong zonal advection on the southern part of the storm forming a turbulent region. Simulations of the equatorial 1990 GWS (planetographic latitude +12º-+5º, zonal velocity of the source 365-400 m s-1) show a different behavior because of the intense eastward jet, meridional shear at the equatorial region, and low latitude dynamics. A round shaped source forms as observed, with the rapid growth of a Kelvin-Helmholtz instability on the north side of the source due to advection and to the strong meridional wind shear, whereas at the storm latitude the disturbance grows and propagates eastward. The storm nucleus is the manifestation of a Rossby wave, while the eastward propagating planetary-scale disturbance is a gravity-Rossby wave trapped around the equator. The simulated 1960 GWS disturbance (planetographic latitude +56º, zonal velocity 4 m s-1) formed a chain of periodic oval spots that mimic the few available observations of the phenomenon. For the mid and high latitude storms, simulations predict a strong injection of negative relative vorticity due to divergence of the upwelling storm material, which may produce large anticyclones on the anticyclonic side of the zonal profile, and a quick turbulent expansion on the background cyclonic regions. In general, simulations indicate that negative relative vorticity injected by storms determines the natural reaction to zonal winds at latitudes where Coriolis forces are dominant.

FPI observations of nighttime mesospheric and thermospheric winds in China and their comparisons with HWM07

NASA Astrophysics Data System (ADS)

Yuan, Wei

2015-04-01

We analyzed the nighttime horizontal neutral winds in the middle atmosphere (˜87 and ˜98 km) and thermosphere (˜250 km) derived from a Fabry-Perot interferometer (FPI), which was installed at Xinglong station (40.2◦ N, 117.4◦ E) in central China. The wind data covered the period from April 2010 to July 2012. We studied the annual, semiannual and terannual variations of the midnight winds at ˜87 km, ˜98 km and ˜250 km for the first time and compared them with Horizontal Wind Model 2007 (HWM07). Our results show the following: (1) at ˜ 87 km, both the observed and model zonal winds have similar phases in the annual and semiannual variations. However, the HWM07 amplitudes are much larger. (2) At ˜98 km, the model shows strong eastward wind in the summer solstice, resulting in a large annual variation, while the observed strongest component is semiannual. The observation and model midnight meridional winds agree well. Both are equatorward throughout the year and have small amplitudes in the annual and semiannual variations. (3) There are large discrepancies between the observed and HWM07 winds at ˜250 km. This discrepancy is largely due to the strong semiannual zonal wind in the model and the phase difference in the annual variation of the meridional wind. The FPI annual variation coincides with the results from Arecibo, which has similar geomagnetic latitude as Xinglong station. In General, the consistency of FPI winds with model winds is better at ˜87 and ˜98 km than that at ˜250 km. We also studied the seasonally and monthly averaged nighttime winds. The most salient features include the following: (1) the seasonally averaged zonal winds at ˜87 and ˜98 km typically have small variations throughout the night. (2) The model zonal and meridional nighttime wind variations are typically much larger than those of observations at ˜87 km and ˜98 km. (3) At ˜250 km, model zonal wind compares well with the observation in the winter. For spring and autumn, the model wind is more eastward before ˜ 03:00 LT but more westward after. The observed nighttime zonal and meridional winds on average are close to zero in the summer and autumn, which indicates a lack of strong stable tides. The consistency of FPI zonal wind with model wind at ˜250 km is better than the meridional wind.

Comparison of Profile Total Ozone from SBUV (v8.6) with GOME-Type and Ground-Based Total Ozone for a 16-Year Period (1996 to 2011)

NASA Technical Reports Server (NTRS)

Chiou, E. W.; Bhartia, P. K.; McPeters, R. D.; Loyola, D. G.; Coldewey-Egbers, M.; Fioletov, V. E.; Van Roozendael, M.; Spurr, R.; Lerot, C.; Frith, S. M.

2014-01-01

This paper describes the comparison of the variability of total column ozone inferred from the three independent multi-year data records, namely, (i) Solar Backscatter Ultraviolet Instrument (SBUV) v8.6 profile total ozone, (ii) GTO (GOME-type total ozone), and (iii) ground-based total ozone data records covering the 16-year overlap period (March 1996 through June 2011). Analyses are conducted based on area-weighted zonal means for 0-30degS, 0-30degN, 50-30degS, and 30-60degN. It has been found that, on average, the differences in monthly zonal mean total ozone vary between -0.3 and 0.8% and are well within 1 %. For GTO minus SBUV, the standard deviations and ranges (maximum minus minimum) of the differences regarding monthly zonal mean total ozone vary between 0.6-0.7% and 2.8-3.8% respectively, depending on the latitude band. The corresponding standard deviations and ranges regarding the differences in monthly zonal mean anomalies show values between 0.4-0.6% and 2.2-3.5 %. The standard deviations and ranges of the differences ground-based minus SBUV regarding both monthly zonal means and anomalies are larger by a factor of 1.4-2.9 in comparison to GTO minus SBUV. The ground-based zonal means demonstrate larger scattering of monthly data compared to satellite-based records. The differences in the scattering are significantly reduced if seasonal zonal averages are analyzed. The trends of the differences GTO minus SBUV and ground-based minus SBUV are found to vary between -0.04 and 0.1%/yr (-0.1 and 0.3DU/yr). These negligibly small trends have provided strong evidence that there are no significant time-dependent differences among these multiyear total ozone data records. Analyses of the annual deviations from pre-1980 level indicate that, for the 15-year period of 1996 to 2010, all three data records show a gradual increase at 30-60degN from -5% in 1996 to -2% in 2010. In contrast, at 50-30degS and 30degS- 30degN there has been a leveling off in the 15 years after 1996. The deviations inferred from GTO and SBUV show agreement within 1 %, but a slight increase has been found in the differences during the period 1996-2010.

Results of a zonally truncated three-dimensional model of the Venus middle atmosphere

NASA Technical Reports Server (NTRS)

Newman, M.

1992-01-01

Although the equatorial rotational speed of the solid surface of Venus is only 4 m s(exp-1), the atmospheric rotational speed reaches a maximum of approximately 100 m s(exp-1) near the equatorial cloud top level (65 to 70 km). This phenomenon, known as superrotation, is the central dynamical problem of the Venus atmosphere. We report here the results of numerical simulations aimed at clarifying the mechanism for maintaining the equatorial cloud top rotation. Maintenance of an equatorial rotational speed maximum above the surface requires waves or eddies that systematically transport angular momentum against its zonal mean gradient. The zonally symmetric Hadley circulation is driven thermally and acts to reduce the rotational speed at the equatorial cloud top level; thus wave or eddy transport must counter this tendency as well as friction. Planetary waves arising from horizontal shear instability of the zonal flow (barotropic instability) could maintain the equatorial rotation by transporting angular momentum horizontally from midlatitudes toward the equator. Alternatively, vertically propagating waves could provide the required momentum source. The relative motion between the rotating atmosphere and the pattern of solar heating, which as a maximum where solar radiation is absorbed near the cloud tops, drives diurnal and semidiurnal thermal tides that propagate vertically away from the cloud top level. The effect of this wave propagation is to transport momentum toward the cloud top level at low latitudes and accelerate the mean zonal flow there. We employ a semispectral primitive equation model with a zonal mean flow and zonal wavenumbers 1 and 2. These waves correspond to the diurnal and semidiurnal tides, but they can also be excited by barotropic or baroclinic instability. Waves of higher wavenumbers and interactions between the waves are neglected. Symmetry about the equator is assumed, so the model applies to one hemisphere and covers the altitude range 30 to 110 km. Horizontal resolution is 1.5 deg latitude, and vertical resolution is 1.5 km. Solar and thermal infrared heating, based on Venus observations and calculations drive the model flow. Dissipation is accomplished mainly by Rayleigh friction, chosen to produce strong dissipation above 85 km in order to absorb upward propagating waves and limit extreme flow velocities there, yet to give very weak Rayleigh friction below 70 km; results in the cloud layer do not appear to be sensitive to the Rayleigh friction. The model also has weak vertical diffusion, and very weak horizontal diffusion, which has a smoothing effect on the flow only at the two grid points nearest the pole.

The role of horizontal thermal advection in regulating wintertime mean and extreme temperatures over the central United States during the past and future

NASA Astrophysics Data System (ADS)

Wang, F.; Vavrus, S. J.

2017-12-01

Horizontal temperature advection plays an especially prominent role in affecting winter climate over continental interiors, where both climatological conditions and extreme weather are strongly regulated by transport of remote air masses. Central North America is one such region, and it experienced a major cold-air outbreak (CAO) a few years ago that some have related to amplified Arctic warming. Despite the known importance of dynamics in shaping the winter climate of this sector and the potential for climate change to modify heat transport, limited attention has been paid to the regional impact of thermal advection. Here, we use a reanalysis product and output from the Community Earth System Model's Large Ensemble to quantify the roles of zonal and meridional temperature advection over the central U. S. during winter, both in the late 20th and 21st centuries. We frame our findings as a "tug of war" between opposing influences of the two advection components and between these dynamical forcings vs. thermodynamic changes under greenhouse warming. For example, Arctic amplification leads to much warmer polar air masses, causing a moderation of cold-air advection into the central U. S., yet the model also simulates a wavier mean circulation and stronger northerly flow during CAOs, favoring lower regional temperatures. We also compare the predominant warming effect of zonal advection and overall cooling effect of meridional temperature advection as an additional tug of war. During both historical and future periods, zonal temperature advection is stronger than meridional advection over the Central U. S. The model simulates a future weakening of both zonal and meridional temperature advection, such that westerly flow provides less warming and northerly flow less cooling. On the most extreme warm days in the past and future, both zonal and meridional temperature advection have positive (warming) contributions. On the most extreme cold days, meridional cold air advection is more important than zonal warm air advection. CAOs in the future feature stronger northerly flow but less extreme temperatures (even relative to the warmer climate), exemplifying the complex competition between thermodynamic and dynamic influences.

Non-isomorphic radial wavenumber dependencies of residual zonal flows in ion and electron Larmor radius scales, and effects of initial parallel flow and electromagnetic potentials in a circular tokamak

NASA Astrophysics Data System (ADS)

Yamagishi, Osamu

2018-04-01

Radial wavenumber dependencies of the residual zonal potential for E × B flow in a circular, large aspect ratio tokamak is investigated by means of the collisionless gyrokinetic simulations of Rosenbluth-Hinton (RH) test and the semi-analytic approach using an analytic solution of the gyrokinetic equation Rosenbluth and Hinton (1998 Phys. Rev. Lett. 80 724). By increasing the radial wavenumber from an ion Larmor radius scale {k}r{ρ }i≲ 1 to an electron Larmor radius scale {k}r{ρ }e≲ 1, the well-known level ˜ O[1/(1+1.6{q}2/\\sqrt{r/{R}0})] is retained, while the level remains O(1) when the wavenumber is decreased from the electron to the ion Larmor radius scale, if physically same adiabatic assumption is presumed for species other than the main species that is treated kinetically. The conclusion is not modified by treating both species kinetically, so that in the intermediate scale between the ion and electron Larmor radius scale it seems difficult to determine the level uniquely. The toroidal momentum conservation property in the RH test is also investigated by including an initial parallel flow in addition to the perpendicular flow. It is shown that by taking a balance between the initial parallel flow and perpendicular flows which include both E × B flow and diamagnetic flow in the initial condition, the mechanical toroidal angular momentum is approximately conserved despite the toroidal symmetry breaking due to the finite radial wavenumber zonal modes. Effect of electromagnetic potentials is also investigated. When the electromagnetic potentials are applied initially, fast oscillations which are faster than the geodesic acoustic modes are introduced in the decay phase of the zonal modes. Although the residual level in the long time limit is not modified, this can make the time required to reach the stationary zonal flows longer and may weaken the effectiveness of the turbulent transport suppression by the zonal flows.

ENSO and East Asian winter monsoon relationship modulation associated with the anomalous northwest Pacific anticyclone

NASA Astrophysics Data System (ADS)

Kim, Ji-Won; An, Soon-Il; Jun, Sang-Yoon; Park, Hey-Jin; Yeh, Sang-Wook

2017-08-01

Using observational datasets and numerical model experiments, the mechanism on the slowly varying change in the relationship between the El Niño-Southern Oscillation (ENSO) and the East Asian winter monsoon (EAWM) is investigated. The decadal-window (11-, 15-, and 21-year) moving correlations show a significant change in the boreal wintertime ENSO-EAWM relationship between two sub-periods of 1976‒1992 and 1997‒2013. Such recent change in ENSO-EAWM relationship is mainly attributed to the changes in the intensity and zonal location of the anomalous lower-tropospheric northwest Pacific anticyclone (NWP-AC). NWP-AC commonly develops near the region of the Philippine Sea during the ENSO's peak phase and plays an important role of bridging the tropical convection and mid-latitude teleconnection. On one hand, the intensity of the NWP-AC is influenced by the interdecadal variation in a linkage between ENSO and the Indian Ocean sea surface temperature (SST) variability, referring that a strong connection between the Pacific and Indian Oceans results in the strengthening of NWP-AC response to ENSO. On the other hand, the zonal displacement of the NWP-AC is associated with the Pacific Decadal Oscillation (PDO) and the Atlantic Multidecadal Oscillation (AMO). That is, the tropical Pacific mean state (i.e., zonal SST gradient between climatologically warm western Pacific and cold eastern Pacific)—strengthened by either the negative PDO phase or the positive AMO phase—drives the anomalous ENSO-induced convection to be shifted to the west. With this westward shift, the zonal center of the NWP-AC also migrates westward over the Philippine Islands and exerts stronger connection between ENSO and EAWM. In contrast, the relaxed zonal SST contrast associated with either the positive PDO phase or the negative AMO phase tends to exhibit weaker ENSO-EAWM relationship via both of eastward shifted zonal centers of the anomalous ENSO-induced convection and the NWP-AC. Finally, a series of the numerical experiments conducted by an atmospheric general circulation model supports the observational findings.

The dynamical core of the Aeolus 1.0 statistical-dynamical atmosphere model: validation and parameter optimization

NASA Astrophysics Data System (ADS)

Totz, Sonja; Eliseev, Alexey V.; Petri, Stefan; Flechsig, Michael; Caesar, Levke; Petoukhov, Vladimir; Coumou, Dim

2018-02-01

We present and validate a set of equations for representing the atmosphere's large-scale general circulation in an Earth system model of intermediate complexity (EMIC). These dynamical equations have been implemented in Aeolus 1.0, which is a statistical-dynamical atmosphere model (SDAM) and includes radiative transfer and cloud modules (Coumou et al., 2011; Eliseev et al., 2013). The statistical dynamical approach is computationally efficient and thus enables us to perform climate simulations at multimillennia timescales, which is a prime aim of our model development. Further, this computational efficiency enables us to scan large and high-dimensional parameter space to tune the model parameters, e.g., for sensitivity studies.Here, we present novel equations for the large-scale zonal-mean wind as well as those for planetary waves. Together with synoptic parameterization (as presented by Coumou et al., 2011), these form the mathematical description of the dynamical core of Aeolus 1.0.We optimize the dynamical core parameter values by tuning all relevant dynamical fields to ERA-Interim reanalysis data (1983-2009) forcing the dynamical core with prescribed surface temperature, surface humidity and cumulus cloud fraction. We test the model's performance in reproducing the seasonal cycle and the influence of the El Niño-Southern Oscillation (ENSO). We use a simulated annealing optimization algorithm, which approximates the global minimum of a high-dimensional function.With non-tuned parameter values, the model performs reasonably in terms of its representation of zonal-mean circulation, planetary waves and storm tracks. The simulated annealing optimization improves in particular the model's representation of the Northern Hemisphere jet stream and storm tracks as well as the Hadley circulation.The regions of high azonal wind velocities (planetary waves) are accurately captured for all validation experiments. The zonal-mean zonal wind and the integrated lower troposphere mass flux show good results in particular in the Northern Hemisphere. In the Southern Hemisphere, the model tends to produce too-weak zonal-mean zonal winds and a too-narrow Hadley circulation. We discuss possible reasons for these model biases as well as planned future model improvements and applications.

Can tree-ring isotopes (δ18O and δ13C) improve our understanding of hydroclimate variability in the Columbia River Basin?

NASA Astrophysics Data System (ADS)

Csank, A. Z.; Wise, E.; McAfee, S. A.

2015-12-01

The trajectory of incoming storms from the Pacific Ocean has a strong impact on hydroclimate in the Pacific Northwest. Shifts between zonal and meridional flow are a key influence on drought and pluvial regimes in both the PNW and the western United States as a whole. Circulation-dependent variability in the isotopic composition of precipitation can be recorded and potentially reconstructed using δ18O records derived from tree-rings. Here we present isotopic records of δ18O and δ13C from ponderosa pine (Pinus ponderosa) for the period 1950-2013 from six sites located in the lee of the Cascades in eastern Washington. Because of the orientation of the Cascades, zonal flow will result in an intensified rain shadow whereas meridional flow allows moisture to penetrate at a lower elevation leading to a lower rainout effect. This means zonal flow results in drier conditions in eastern Washington and the converse for meridional flow. We hypothesized that more depleted precipitation δ18O values will occur with periods of more zonal flow across the PNW and will be recorded by trees at our sites. Results show a strong relationship between our δ18O chronologies and winter precipitation (R = -0.50; p<0.001). δ13C chronologies from the same trees showed a relationship to prior fall/winter (pOct-pDec) precipitation (R = -0.46; p<0.005) suggesting a possible link to antecedent moisture conditions. With a focus on years with clear zonal and meridional flow regimes, we regressed the tree-ring δ18O anomaly against the instrumental record of total precipitation and compared the residual series to records of storm track for the period 1978-2008, and we found a detectable signal where the most depleted δ18O was generally associated with zonal flow and the most enriched δ18O with meridional flow. However, there are still some years where the relationship is unclear. Further work is aimed at understanding these anomalous years and extending our record beyond the instrumental period.

Measurements of Thermophysical Properties of Molten Silicon and Geranium

NASA Technical Reports Server (NTRS)

Rhim, Won-Kyu

2001-01-01

The objective of this ground base program is to measure thermophysical properties of molten/ undercooled silicon, germanium, and Si-Ge alloys using a high temperature electrostatic levitator and in clearly assessing the need of the microgravity environment to achieve the objective with higher degrees of accuracy. Silicon and germanium are two of the most important semiconductors for industrial applications: silicon is unsurpassed as a microelectronics material, occupying more than 95% of the electronics market. Si-Ge alloy is attracting keen interest for advanced electronic and optoelectronic applications in view of its variable band gap and lattice parameter depending upon its composition. Accurate thermophysical properties of these materials are very much needed in the semiconductor industry for the growth of large high quality crystals.

Baseline predictability of daily east Asian summer monsoon circulation indices

NASA Astrophysics Data System (ADS)

Ai, Shucong; Chen, Quanliang; Li, Jianping; Ding, Ruiqiang; Zhong, Quanjia

2017-05-01

The nonlinear local Lyapunov exponent (NLLE) method is adopted to quantitatively determine the predictability limit of East Asian summer monsoon (EASM) intensity indices on a synoptic timescale. The predictability limit of EASM indices varies widely according to the definitions of indices. EASM indices defined by zonal shear have a limit of around 7 days, which is higher than the predictability limit of EASM indices defined by sea level pressure (SLP) difference and meridional wind shear (about 5 days). The initial error of EASM indices defined by SLP difference and meridional wind shear shows a faster growth than indices defined by zonal wind shear. Furthermore, the indices defined by zonal wind shear appear to fluctuate at lower frequencies, whereas the indices defined by SLP difference and meridional wind shear generally fluctuate at higher frequencies. This result may explain why the daily variability of the EASM indices defined by zonal wind shear tends be more predictable than those defined by SLP difference and meridional wind shear. Analysis of the temporal correlation coefficient (TCC) skill for EASM indices obtained from observations and from NCEP's Global Ensemble Forecasting System (GEFS) historical weather forecast dataset shows that GEFS has a higher forecast skill for the EASM indices defined by zonal wind shear than for indices defined by SLP difference and meridional wind shear. The predictability limit estimated by the NLLE method is shorter than that in GEFS. In addition, the June-September average TCC skill for different daily EASM indices shows significant interannual variations from 1985 to 2015 in GEFS. However, the TCC for different types of EASM indices does not show coherent interannual fluctuations.

A thickness-weighted average perspective of force balance in an idealized circumpolar current

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ringler, Todd Darwin; Saenz, Juan Antonio; Wolfram, Jr., Phillip Justin

The exact, three-dimensional thickness-weighted averaged (TWA) Boussinesq equations are used to diagnose eddy-mean flow interaction in an idealized circumpolar current (ICC). The force exerted by mesoscale eddies on the TWA velocity is expressed as the divergence of the Eliassen-Palm flux tensor. Consistent with previous findings, the analysis indicates that the dynamically relevant definition of the ocean surface layer is comprised of the set of buoyancy coordinates that ever reside at the ocean surface at a given horizontal position. The surface layer is found to be a physically distinct object with a diabatic- and force-balance that is largely isolated from themore » underlying adiabatic region in the interior. Within the ICC surface layer, the TWA meridional velocity is southward/northward in the top/bottom half, and has a value near zero at the bottom. In the top half of the surface layer, the zonal forces due to wind stress and meridional advection of potential vorticity act to accelerate the TWA zonal velocity; equilibrium is obtained by eddies decelerating the zonal flow via a downward flux of eastward momentum that increases with depth. In the bottom half of the surface layer, the accelerating force of the wind stress is balanced by the eddy force and meridional advection of potential vorticity. The bottom of the surface layer coincides with the location where the zonal eddy force, meridional advection of potential vorticity and zonal wind stress force are all zero. The net meridional transport, S f, within the surface layer is a small residual of its southward and northward TWA meridional flows. Furthermore, the mean meridional gradient of surface-layer buoyancy is advected by S f to balance the surface buoyancy fluxs.« less

The Relationship of High-Latitude Thermospheric Wind With Ionospheric Horizontal Current, as Observed by CHAMP Satellite

NASA Astrophysics Data System (ADS)

Huang, Tao; Lühr, Hermann; Wang, Hui; Xiong, Chao

2017-12-01

The relationship between high-latitude ionospheric currents (Hall current and field-aligned current) and thermospheric wind is investigated. The 2-D patterns of horizontal wind and equivalent current in the Northern Hemisphere derived from the CHAMP satellite are considered for the first time simultaneously. The equivalent currents show strong dependences on both interplanetary magnetic field (IMF) By and Bz components. However, IMF By orientation is more important in controlling the wind velocity patterns. The duskside wind vortex as well as the antisunward wind in the morning polar cap is more evident for positive By. To better understand their spatial relation in different sectors, a systematic superposed epoch analysis is applied. Our results show that in the dusk sector, the vectors of the zonal wind and equivalent current are anticorrelated, and both of them form a vortical flow pattern for different activity levels. The currents and zonal wind are intensified with the increase of merging electric field. However, on the dawnside, where the relation is less clear, antisunward zonal winds dominate. Plasma drift seems to play a less important role for the wind than neutral forces in this sector. In the noon sector, the best anticorrelation between equivalent current and wind is observed for a positive IMF By component and it is less obvious for negative By. A clear seasonal effect with current intensities increasing from winter to summer is observed in the noon sector. Different from the currents, the zonal wind intensity shows little dependence on seasons. Our results indicate that the plasma drift and the neutral forces are of comparable influence on the zonal wind at CHAMP altitude in the noon sector.

A thickness-weighted average perspective of force balance in an idealized circumpolar current

DOE PAGES

Ringler, Todd Darwin; Saenz, Juan Antonio; Wolfram, Jr., Phillip Justin; ...

2016-11-22

The exact, three-dimensional thickness-weighted averaged (TWA) Boussinesq equations are used to diagnose eddy-mean flow interaction in an idealized circumpolar current (ICC). The force exerted by mesoscale eddies on the TWA velocity is expressed as the divergence of the Eliassen-Palm flux tensor. Consistent with previous findings, the analysis indicates that the dynamically relevant definition of the ocean surface layer is comprised of the set of buoyancy coordinates that ever reside at the ocean surface at a given horizontal position. The surface layer is found to be a physically distinct object with a diabatic- and force-balance that is largely isolated from themore » underlying adiabatic region in the interior. Within the ICC surface layer, the TWA meridional velocity is southward/northward in the top/bottom half, and has a value near zero at the bottom. In the top half of the surface layer, the zonal forces due to wind stress and meridional advection of potential vorticity act to accelerate the TWA zonal velocity; equilibrium is obtained by eddies decelerating the zonal flow via a downward flux of eastward momentum that increases with depth. In the bottom half of the surface layer, the accelerating force of the wind stress is balanced by the eddy force and meridional advection of potential vorticity. The bottom of the surface layer coincides with the location where the zonal eddy force, meridional advection of potential vorticity and zonal wind stress force are all zero. The net meridional transport, S f, within the surface layer is a small residual of its southward and northward TWA meridional flows. Furthermore, the mean meridional gradient of surface-layer buoyancy is advected by S f to balance the surface buoyancy fluxs.« less

Impacts of the IOD-associated temperature and salinity anomalies on the intermittent equatorial undercurrent anomalies

NASA Astrophysics Data System (ADS)

Li, Junde; Liang, Chujin; Tang, Youmin; Liu, Xiaohui; Lian, Tao; Shen, Zheqi; Li, Xiaojing

2017-11-01

The study of Equatorial Undercurrent (EUC) has attracted a broad attention in recent years due to its strong response and feedback to the Indian Ocean Dipole. In this paper, we first produce a high-quality simulation of three-dimensional temperature, salinity and zonal current simulation from 1982 to 2014, using a high-resolution ocean general circulation model. On this basis, with two sensitivity experiments, we investigate the role of temperature and salinity anomalies in driving and enhancing the EUC during the positive IOD events by examining the variation of the EUC seasonal cycle and diagnosing the zonal momentum budget along the equatorial Indian Ocean. Our results show that during January-March, the EUC can appear along the entire equatorial Indian Ocean in all years, but during August-November, the EUC can appear and reach the eastern Indian Ocean only during the positive IOD events. The zonal momentum budget analysis indicates that the pressure gradient force contributes most to the variation of the eastward acceleration of zonal currents in the subsurface. During the positive IOD events, strong negative subsurface temperature anomalies exist in the eastern Indian Ocean, with negative surface salinity anomalies in the central and eastern Indian Ocean, resulting in a large pressure gradient force to drive EUC during the August-November. Further, the results of two sensitivity experiments indicate that the temperature anomalies significantly impact the pressure gradient force, playing a leading role in driving the EUC, while the surface salinity anomalies can secondarily help to intensify the eastward EUC through increasing the zonal density gradient in the eastern Indian Ocean and impacting the vertical momentum advection in the subsurface.

An ocean dynamical thermostat—dominant in observations, absent in climate models

NASA Astrophysics Data System (ADS)

Coats, S.; Karnauskas, K. B.

2016-12-01

The pattern of sea surface temperature (SST) in the tropical Pacific Ocean is coupled to the Walker circulation, necessitating an understanding of how this pattern will change in response to anthropogenic radiative forcing. State-of-the-art climate models from the Coupled Model Intercomparison Project phase 5 (CMIP5) overwhelmingly project a decrease in the tropical Pacific zonal SST gradient over the coming century. This decrease in the zonal SST gradient is a response of the ocean to a weakening Walker circulation in the CMIP5 models, a consequence of the mass and energy balances of the hydrologic cycle identified by Held and Soden (2006). CMIP5 models, however, are not able to reproduce the observed increase in the zonal SST gradient between 1900-2013 C.E., which we argue to be robust using advanced statistical techniques and new observational datasets. While the observed increase in the zonal SST gradient is suggestive of the ocean dynamical thermostat mechanism of Clement et al. (1996), a strengthening Equatorial Undercurrent (EUC) also contributes to eastern equatorial Pacific cooling. Importantly, the strengthening EUC is a response of the ocean to a seasonal weakening of the Walker circulation and thus can reconcile disparate observations of changes to the atmosphere and ocean in the equatorial Pacific. CMIP5 models do not capture the magnitude of this response of the EUC to anthropogenic radiative forcing potentially because of biases in the sensitivity of the EUC to changes in zonal wind stress, like the weakening Walker circulation. Consequently, they project a continuation of the opposite to what has been observed in the real world, with potentially serious consequences for projected climate impacts that are influenced by the tropical Pacific.

An ensemble Kalman filter for statistical estimation of physics constrained nonlinear regression models

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harlim, John, E-mail: jharlim@psu.edu; Mahdi, Adam, E-mail: amahdi@ncsu.edu; Majda, Andrew J., E-mail: jonjon@cims.nyu.edu

2014-01-15

A central issue in contemporary science is the development of nonlinear data driven statistical–dynamical models for time series of noisy partial observations from nature or a complex model. It has been established recently that ad-hoc quadratic multi-level regression models can have finite-time blow-up of statistical solutions and/or pathological behavior of their invariant measure. Recently, a new class of physics constrained nonlinear regression models were developed to ameliorate this pathological behavior. Here a new finite ensemble Kalman filtering algorithm is developed for estimating the state, the linear and nonlinear model coefficients, the model and the observation noise covariances from available partialmore » noisy observations of the state. Several stringent tests and applications of the method are developed here. In the most complex application, the perfect model has 57 degrees of freedom involving a zonal (east–west) jet, two topographic Rossby waves, and 54 nonlinearly interacting Rossby waves; the perfect model has significant non-Gaussian statistics in the zonal jet with blocked and unblocked regimes and a non-Gaussian skewed distribution due to interaction with the other 56 modes. We only observe the zonal jet contaminated by noise and apply the ensemble filter algorithm for estimation. Numerically, we find that a three dimensional nonlinear stochastic model with one level of memory mimics the statistical effect of the other 56 modes on the zonal jet in an accurate fashion, including the skew non-Gaussian distribution and autocorrelation decay. On the other hand, a similar stochastic model with zero memory levels fails to capture the crucial non-Gaussian behavior of the zonal jet from the perfect 57-mode model.« less

Simulation of an Ice Giant-style Dynamo

NASA Astrophysics Data System (ADS)

Soderlund, K. M.; Aurnou, J. M.

2010-12-01

The Ice Giants, Uranus and Neptune, are unique in the solar system. These planets are the only known bodies to have multipolar magnetic fields where the quadrupole and octopole components have strengths comparable to or greater than that of the dipole. Cloud layer observations show that the planets also have zonal (east-west) flows that are fundamentally different from the banded winds of Jupiter and Saturn. The surface winds are characterized by strong retrograde equatorial jets that are flanked on either side by prograde jets at high latitudes. Thermal emission measurements of Neptune show that the surface energy flux pattern peaks in the equatorial and polar regions with minima at mid-latitudes. (The measurements for Uranus cannot adequately resolve the emission pattern.) The winds and magnetic fields are thought to be the result of convection in the planetary interior, which will also affect the heat flux pattern. Typically, it is implicitly assumed that the zonal winds are generated in a shallow layer, separate from the dynamo generation region. However, if the magnetic fields are driven near the surface, a single region can simultaneously generate both the zonal flows and the magnetic fields. Here, we present a novel numerical model of an Ice Giant-style dynamo to investigate this possibility. An order unity convective Rossby number (ratio of buoyancy to Coriolis forces) has been chosen because retrograde equatorial jets tend to occur in spherical shells when the effects of rotation are relatively weak. Our modeling results qualitatively reproduce all of the structural features of the global dynamical observations. Thus, a self-consistent model can generate magnetic field, zonal flow, and thermal emission patterns that agree with those of Uranus and Neptune. This model, then, leads us to hypothesize that the Ice Giants' zonal flows and magnetic fields are generated via dynamically coupled deep convection processes.

The effect of the equatorially symmetric zonal winds of Saturn on its gravitational field

NASA Astrophysics Data System (ADS)

Kong, Dali; Zhang, Keke; Schubert, Gerald; Anderson, John D.

2018-04-01

The penetration depth of Saturn’s cloud-level winds into its interior is unknown. A possible way of estimating the depth is through measurement of the effect of the winds on the planet’s gravitational field. We use a self-consistent perturbation approach to study how the equatorially symmetric zonal winds of Saturn contribute to its gravitational field. An important advantage of this approach is that the variation of its gravitational field solely caused by the winds can be isolated and identified because the leading-order problem accounts exactly for rotational distortion, thereby determining the irregular shape and internal structure of the hydrostatic Saturn. We assume that (i) the zonal winds are maintained by thermal convection in the form of non-axisymmetric columnar rolls and (ii) the internal structure of the winds, because of the Taylor-Proundman theorem, can be uniquely determined by the observed cloud-level winds. We calculate both the variation ΔJn , n = 2, 4, 6 … of the axisymmetric gravitational coefficients Jn caused by the zonal winds and the non-axisymmetric gravitational coefficients ΔJnm produced by the columnar rolls, where m is the azimuthal wavenumber of the rolls. We consider three different cases characterized by the penetration depth 0.36, R S, 0.2, R S and 0.1, R S, where R S is the equatorial radius of Saturn at the 1-bar pressure level. We find that the high-degree gravitational coefficient (J 12 + ΔJ 12) is dominated, in all the three cases, by the effect of the zonal flow with |ΔJ 12/J 12| > 100% and that the size of the non-axisymmetric coefficients ΔJ mn directly reflects the depth and scale of the flow taking place in the Saturnian interior.

Initial results from SKiYMET meteor radar at Thumba (8.5°N, 77°E): 1. Comparison of wind measurements with MF spaced antenna radar system

NASA Astrophysics Data System (ADS)

Kumar, Karanam Kishore; Ramkumar, Geetha; Shelbi, S. T.

2007-12-01

In the present communication, initial results from the allSKy interferometric METeor (SKiYMET) radar installed at Thumba (8.5°N, 77°E) are presented. The meteor radar system provides hourly zonal and meridional winds in the mesosphere lower thermosphere (MLT) region. The meteor radar measured zonal and meridional winds are compared with nearby MF radar at Tirunalveli (8.7°N, 77.8°E). The present study provided an opportunity to compare the winds measured by the two different techniques, namely, interferometry and spaced antenna drift methods. Simultaneous wind measurements for a total number of 273 days during September 2004 to May 2005 are compared. The comparison showed a very good agreement between these two techniques in the height region 82-90 km and poor agreement above this height region. In general, the zonal winds compare very well as compared to the meridional winds. The observed discrepancies in the wind comparison above 90 km are discussed in the light of existing limitations of both the radars. The detailed analysis revealed the consistency of the measured winds by both the techniques. However, the discrepancies are observed at higher altitudes and are attributed to the contamination of MF radar neutral wind measurements with Equatorial Electro Jet (EEJ) induced inospheric drifts rather than the limitations of the spaced antenna technique. The comparison of diurnal variation of zonal winds above 90 km measured by both the radars is in reasonably good agreement in the absence of EEJ (during local nighttime). It is also been noted that the difference in the zonal wind measurements by both the radars is directly related to the strength of EEJ, which is a noteworthy result from the present study.

Acute larvicidal toxicity of five essential oils (Pinus nigra, Hyssopus officinalis, Satureja montana, Aloysia citrodora and Pelargonium graveolens) against the filariasis vector Culex quinquefasciatus: Synergistic and antagonistic effects.

PubMed

Benelli, Giovanni; Pavela, Roman; Canale, Angelo; Cianfaglione, Kevin; Ciaschetti, Giampiero; Conti, Fabio; Nicoletti, Marcello; Senthil-Nathan, Sengottayan; Mehlhorn, Heinz; Maggi, Filippo

2017-04-01

Mosquito vector control is facing a number of important and timely challenges, mainly due to the rapid development of pesticide resistance and environmental concerns. In this scenario, screening of botanical resources for their mosquitocidal activity may offer effective and eco-friendly tools against Culicidae vectors. Culex quinquefasciatus Say (Diptera: Culicidae) is a vector of lymphatic filariasis and of dangerous arboviral diseases, such as West Nile and St. Louis encephalitis. In this study, the chemical composition of five essential oils obtained from different plants, namely Pinus nigra J.F. Arnold var. italica (Pinaceae), Hyssopus officinalis L. subsp. aristatus (Lamiaceae), Satureja montana L. subsp. montana (Lamiaceae), Aloysia citriodora Palau (Verbenaceae) and Pelargonium graveolens L'Hér (Geraniaceae), was investigated by GC-MS analysis. Furthermore, it was evaluated their acute toxicity on larvae of C. quinquefasciatus. Then, the most effective oils were selected, in order to focus on the potential synergistic and antagonistic effects, testing them in binary mixtures on C. quinquefasciatus larvae. Results showed that the higher effectiveness was obtained by S. montana subsp. montana essential oil (LC 50 =25.6μL·L -1 ), followed by P. nigra var. italica (LC 50 =49.8μL·L -1 ) and A. citriodora (LC 50 =65.6μL·L -1 ), while the other essential oils showed LC 50 values higher than 90μL·L -1 . The larvicidal effectiveness can be enhanced by preparing simple binary mixtures of essential oils, such as S. montana+A. citriodora (ratio 1:1), which showed higher larvicidal toxicity (LC 50 =18.3μL·L -1 ). On the other hand, testing S. montana+P. nigra (1:1) an antagonistic effect was detected, leading to a LC 50 (72.5μL·L -1 ) higher than the LC 50 values calculated for the two oils tested separately. Overall, our results add useful knowledge to allow the employ of synergistic essential oil blends as effective, cheap and eco-friendly mosquito larvicides. Copyright © 2017 Elsevier B.V. All rights reserved.

Efficient Translation of Pelargonium line pattern virus RNAs Relies on a TED-Like 3´-Translational Enhancer that Communicates with the Corresponding 5´-Region through a Long-Distance RNA-RNA Interaction

PubMed Central

Blanco-Pérez, Marta; Pérez-Cañamás, Miryam; Ruiz, Leticia; Hernández, Carmen

2016-01-01

Cap-independent translational enhancers (CITEs) have been identified at the 3´-terminal regions of distinct plant positive-strand RNA viruses belonging to families Tombusviridae and Luteoviridae. On the bases of their structural and/or functional requirements, at least six classes of CITEs have been defined whose distribution does not correlate with taxonomy. The so-called TED class has been relatively under-studied and its functionality only confirmed in the case of Satellite tobacco necrosis virus, a parasitic subviral agent. The 3´-untranslated region of the monopartite genome of Pelargonium line pattern virus (PLPV), the recommended type member of a tentative new genus (Pelarspovirus) in the family Tombusviridae, was predicted to contain a TED-like CITE. Similar CITEs can be anticipated in some other related viruses though none has been experimentally verified. Here, in the first place, we have performed a reassessment of the structure of the putative PLPV-TED through in silico predictions and in vitro SHAPE analysis with the full-length PLPV genome, which has indicated that the presumed TED element is larger than previously proposed. The extended conformation of the TED is strongly supported by the pattern of natural sequence variation, thus providing comparative structural evidence in support of the structural data obtained by in silico and in vitro approaches. Next, we have obtained experimental evidence demonstrating the in vivo activity of the PLPV-TED in the genomic (g) RNA, and also in the subgenomic (sg) RNA that the virus produces to express 3´-proximal genes. Besides other structural features, the results have highlighted the key role of long-distance kissing-loop interactions between the 3´-CITE and 5´-proximal hairpins for gRNA and sgRNA translation. Bioassays of CITE mutants have confirmed the importance of the identified 5´-3´ RNA communication for viral infectivity and, moreover, have underlined the strong evolutionary constraints that may operate on genome stretches with both regulatory and coding functions. PMID:27043436

Efficient Translation of Pelargonium line pattern virus RNAs Relies on a TED-Like 3´-Translational Enhancer that Communicates with the Corresponding 5´-Region through a Long-Distance RNA-RNA Interaction.

PubMed

Blanco-Pérez, Marta; Pérez-Cañamás, Miryam; Ruiz, Leticia; Hernández, Carmen

2016-01-01

Cap-independent translational enhancers (CITEs) have been identified at the 3´-terminal regions of distinct plant positive-strand RNA viruses belonging to families Tombusviridae and Luteoviridae. On the bases of their structural and/or functional requirements, at least six classes of CITEs have been defined whose distribution does not correlate with taxonomy. The so-called TED class has been relatively under-studied and its functionality only confirmed in the case of Satellite tobacco necrosis virus, a parasitic subviral agent. The 3´-untranslated region of the monopartite genome of Pelargonium line pattern virus (PLPV), the recommended type member of a tentative new genus (Pelarspovirus) in the family Tombusviridae, was predicted to contain a TED-like CITE. Similar CITEs can be anticipated in some other related viruses though none has been experimentally verified. Here, in the first place, we have performed a reassessment of the structure of the putative PLPV-TED through in silico predictions and in vitro SHAPE analysis with the full-length PLPV genome, which has indicated that the presumed TED element is larger than previously proposed. The extended conformation of the TED is strongly supported by the pattern of natural sequence variation, thus providing comparative structural evidence in support of the structural data obtained by in silico and in vitro approaches. Next, we have obtained experimental evidence demonstrating the in vivo activity of the PLPV-TED in the genomic (g) RNA, and also in the subgenomic (sg) RNA that the virus produces to express 3´-proximal genes. Besides other structural features, the results have highlighted the key role of long-distance kissing-loop interactions between the 3´-CITE and 5´-proximal hairpins for gRNA and sgRNA translation. Bioassays of CITE mutants have confirmed the importance of the identified 5´-3´ RNA communication for viral infectivity and, moreover, have underlined the strong evolutionary constraints that may operate on genome stretches with both regulatory and coding functions.

Extract of Pelargonium sidoides (EPs 7630) improves phagocytosis, oxidative burst, and intracellular killing of human peripheral blood phagocytes in vitro.

PubMed

Conrad, Andreas; Hansmann, Cathrin; Engels, Inge; Daschner, Franz D; Frank, Uwe

2007-01-01

Clinical data show that EPs 7630, an aqueous ethanolic extract from the roots of Pelargonium sidoides, can be used for the treatment of upper respiratory tract infections (URTI). The biological effects of the preparation have not been fully investigated. The objective of this study was to examine the impact of EPs 7630 on the activity of human peripheral blood phagocytes (PBP). A whole blood-based, flow cytometric assay was used to simultaneously assess phagocytosis and oxidative burst. Calcein-AM stained Candida albicans (DSM 1386) were used as target organisms. Oxidative burst was measured by addition of dihydroethidium (DHE). Target organisms and whole blood were co-incubated and analyzed after 0, 2, 4, 6, 10, and 30 min. Intracellular killing of the target organisms was evaluated by determining the number of surviving yeast cells after co-incubation of C. albicans and human whole blood. EPs 7630 was applied in therapeutically relevant concentrations between 0 and 30 microg/ml. Compared with controls EPs 7630 increased the number of phagocytosing PBP during the observed time points between 2 and 10 min in a concentration-dependent manner, with a maximum enhancement of 56% at 2 min (p=0.002). The application of EPs 7630 also led to a significant increase in the number of burst-active PBP for all time points observed beyond 2 min (p<0.001). The maximum augmentation was 120% after application of 30 microg/ml EPs 7630 at 4 min. Using a microbiological assay, intracellular killing was also enhanced by EPs 7630. This was expressed by a significant reduction in the number of surviving target organisms (p<0.001). The maximum reduction in viable yeast cells (-31%) was observed after co-incubation for 120 min with the highest concentration of EPs 7630 (30 microg/ml). In conclusion, the positive effects of EPs 7630 on phagocytosis, oxidative burst, and intracellular killing of yeast cells as test organisms are important components of the compound's biological activity. Our findings constitute a valuable contribution to understanding the clinical effects of EPs 7630.

A numerical model of gravity wave breaking and stress in the mesosphere

NASA Technical Reports Server (NTRS)

Schoeberl, M. R.; Strobel, D. F.; Apruzese, J. P.

1983-01-01

The goal of the study is to calculate numerically the deceleration and heating caused by breaking gravity waves. The effect of the radiative dissipation of the wave is included as vertical-wavelength-dependent Newtonian cooling. The parameterization for zonal deceleration is extended by breaking gravity waves (Lindzen, 1981) to include the turbulent diffusion of heat and momentum. After describing the numerical model, the numerical results are presented and compared with the parameterizations in a noninteractive model of the mean zonal wind. Attention is then given to the transport of constituents by gravity waves and the attendant turbulent zone. It is noted that if gravity wave breaking were not an intermittent process, gravity wave stresses would produce an adiabatic mesosphere with a zonal mean velocity close to the phase speed of the breaking wave.

Low- and mid-latitude ionospheric electric fields during the January 1984 GISMOS campaign

NASA Technical Reports Server (NTRS)

Fejer, B. G.; Kelley, M. C.; Senior, C.; De La Beaujardiere, O.; Lepping, R.

1990-01-01

The electrical coupling between the high-, middle-, and low-latitude ionospheres during January 17-19, 1984 is examined, using interplanetary and high-latitude magnetic field data together with F region plasma drift measurements from the EISCAT, Sondre Stromfjord, Millstone Hill, Saint-Santin, Arecibo, and Jicamarca incoherent scatter radars. The penetration both the zonal and meridional electric field components of high-latitude origin into the low-latitude and the equatorial ionospheres are studied. The observations in the postmidnight sector are used to compare the longitudinal variations of the zonal perturbation electric field with predictions made from global convection models. The results show that the meridional electric field perturbations are considerably more attenuated with decreasing latitude than the zonal fluctuations. It is concluded that variations in the meridional electric field at low latitudes are largely due to dynamo effects.

Remote sensing of mesospheric winds with the High-Resolution Doppler Imager

NASA Technical Reports Server (NTRS)

Hays, Paul B.; Abreu, V. J.; Burrage, M. D.; Gell, D. A.; Grassi, H. J.; Marshall, A. R.; Morton, Y. T.; Ortland, D. A.; Skinner, W. R.; Wu, D. L.

1992-01-01

Observations of the winds in the upper atmosphere obtained with the High-Resolution Doppler Imager (HRDI) on the Upper Atmosphere Research Satellite (UARS) are discussed. This instrument is a very stable high-resolution triple-etalon Fabry-Perot interferometer, which is used to observe the slight Doppler shifts of absorption and emission lines in the O2 Atmospheric bands induced by atmospheric motions. Preliminary observations indicate that the winds in the mesosphere and lower thermosphere are a mixture of migrating and non-migrating tides, and planetary-scale waves. The mean meridional winds are dominated by the 1,1 diurnal tide which is easily extracted from the daily zonal means of the satellite observations. The daily mean zonal winds are a mixture of the diurnal tide and a zonal flow which is consistent with theoretical expectations.

Characteristics of Southern Hemisphere 200 mb flow as determined from satellite data

NASA Technical Reports Server (NTRS)

Adler, R. F.

1976-01-01

Characteristics of Southern Hemisphere 200 mb flow are examined using geopotential height fields constructed with the aid of satellite based thermal structure. Similar Northern Hemisphere, satellite based fields are developed in order to make interhemispheric comparisons. Results indicate that both the zonal and meridional components of the S.H. eddy kinetic energy are as large as their N.H. counterparts. In winter the principal interhemispheric difference with respect to eddy kinetic energy is that the S.H. standing eddies are much less important only to the meridional component. Zonal component standing energy is about equal in the two hemispheres. In summer the S.H. has larger zonal eddy kinetic energy than the N.H. and smaller standing eddy contributions in both components. The meridional spectra show a preference for intermediate size transient waves.

Evidence for wavelike anomalies with short meridional and large zonal scales in the lower stratospheric temperature field

NASA Technical Reports Server (NTRS)

Stanford, J. L.; Short, D. A.

1981-01-01

Global microwave brightness temperature measurements are analyzed to investigate the range of meridional wavelengths 2000-3000 km where spectral studies reveal larger than expected variance. The data, from the TIROS-N Microwave Sounding Unit, are sensitive to lower stratospheric temperatures (30-150 mb). The results reveal striking temperature anomalies with short meridional wavelengths (2000-3000 km) and long zonal wavelengths (zonal wavenumbers 1-4). The anomalies, with amplitudes approximately 1-2 K, extend from the equatorial region to at least as high as 70 deg N and 70 deg S during January 1979. The features exhibit slow eastward movement or else are nearly stationary for several days. In the Northern Hemisphere, comparison with NMC data reveals that the strongest features tend to be associated with major jet streams.

Three-dimensional baroclinic instability of a Hadley cell for small Richardson number

NASA Technical Reports Server (NTRS)

Antar, B. N.; Fowlis, W. W.

1983-01-01

For the case of a baroclinic flow whose Richardson number, Ri, is of order unity, a three-dimensional linear stability analysis is conducted on the basis of a model for a thin, horizontal, rotating fluid layer which is subjected to horizontal and vertical temperature gradients. The Hadley cell basic state and stability analysis are both based on the Navier-Stokes and energy equations, and perturbations possessing zonal, meridional, and vertical structures are considered. An attempt is made to extend the previous theoretical work on three-dimensional baroclinic instability for small Ri to a more realistic model involving the Prandtl and Ekman numbers, as well as to finite growth rates and a wider range of the zonal wavenumber. In general, it is found that the symmetric modes of maximum growth are not purely symmetric, but have a weak zonal structure.

A model of stratospheric chemistry and transport on an isentropic surface

NASA Technical Reports Server (NTRS)

Austin, John; Holton, James R.

1990-01-01

This paper presents a new photochemical transport model designed to simulate the behavior of stratospheric trace species in the middle stratosphere. The model has an Eulerian grid with the latitude and longitude coordinates on a single isentropic surface (hemispheric or global), in which both the dynamical and the photochemical processes can be accurately represented. The model is intgegrated for 12 days with winds and temperatures supplied by three-dimensional integration of an idealized wavenumber-one disturbance. The results for the long-lived tracers such as N2O showed excellent correlation with the potential vorticity distribution, validating the transport scheme. Calculations with zonally averaged wind and temperature fields showed that discrepancies in the calculation of the zonal mean were less than 10 percent for O3 and HNO3, compared with the zonal mean of the previous results.

Inclusion of inhomogeneous deformation and strength characteristics in the problem on zonal disintegration of rocks

NASA Astrophysics Data System (ADS)

Chanyshev, AI; Belousova, OE

2018-03-01

The authors determine stress and deformation in a heterogeneous rock mass at the preset displacement and Cauchy stress vector at the boundary of an underground excavation. The influence of coordinates on Young’s modulus, shear modulus and ultimate strength is shown. It is found that regions of tension and compression alternate at the excavation boundary—i.e. zonal rock disintegration phenomenon is observed.

Nonlinear growth of zonal flows by secondary instability in general magnetic geometry

DOE PAGES

Plunk, G. G.; Navarro, A. Banon

2017-02-23

Here we present a theory of the nonlinear growth of zonal flows in magnetized plasma turbulence, by the mechanism of secondary instability. The theory is derived for general magnetic geometry, and is thus applicable to both tokamaks and stellarators. The predicted growth rate is shown to compare favorably with nonlinear gyrokinetic simulations, with the error scaling as expected with the small parameter of the theory.

Magnetic activity and radial electric field during I-phase in ASDEX Upgrade plasmas

NASA Astrophysics Data System (ADS)

Birkenmeier, Gregor; Cavedon, Marco; Conway, Garrard; Manz, Peter; Puetterich, Thomas; Stroth, Ulrich; ASDEX Upgrade Team Team

2016-10-01

At the transition from the low (L-mode) to the high (H-mode) confinement regime, so called limit-cycle oscillations (LCOs) can occur at the edge of a fusion plasma. During the LCO evolution, which is also called I-phase, the relative importance of background flows and turbulence-generated zonal flows can change, and it is still unclear whether a large contribution of zonal flows is a necessary condition for triggering the H-mode. At ASDEX Upgrade, I-phases have been studied in a wide range of parameters. The modulation of flows and gradients during I-phase is accompanied by a strong magnetic activity with a specific poloidal and toroidal structure. The magnetic activity increases during the development of an edge pedestal during I-phase, and is preceded by type-III ELM-like precursors. During all phases of the I-phase, the radial electric field Er is found to be close to the neoclassical prediction of the electric field Er , neo. These results suggest that zonal flows do not contribute significantly to the LCO dynamics, and the burst like behavior is reminiscent of a critical-gradient driven instability like edge localized modes. These observations on ASDEX Upgrade seem to be inconsistent with LCO models based on an interaction between zonal flows and turbulence.

Zonal Flows and Long-lived Axisymmetric Pressure Bumps in Magnetorotational Turbulence

NASA Astrophysics Data System (ADS)

Johansen, A.; Youdin, A.; Klahr, H.

2009-06-01

We study the behavior of magnetorotational turbulence in shearing box simulations with a radial and azimuthal extent up to 10 scale heights. Maxwell and Reynolds stresses are found to increase by more than a factor of 2 when increasing the box size beyond two scale heights in the radial direction. Further increase of the box size has little or no effect on the statistical properties of the turbulence. An inverse cascade excites magnetic field structures at the largest scales of the box. The corresponding 10% variation in the Maxwell stress launches a zonal flow of alternating sub- and super-Keplerian velocity. This, in turn, generates a banded density structure in geostrophic balance between pressure and Coriolis forces. We present a simplified model for the appearance of zonal flows, in which stochastic forcing by the magnetic tension on short timescales creates zonal flow structures with lifetimes of several tens of orbits. We experiment with various improved shearing box algorithms to reduce the numerical diffusivity introduced by the supersonic shear flow. While a standard finite difference advection scheme shows signs of a suppression of turbulent activity near the edges of the box, this problem is eliminated by a new method where the Keplerian shear advection is advanced in time by interpolation in Fourier space.

Global structure and seasonal variability of the migrating terdiurnal tide in the mesosphere and lower thermosphere

NASA Astrophysics Data System (ADS)

Yue, Jia; Xu, Jiyao; Chang, Loren C.; Wu, Qian; Liu, Han-Li; Lu, Xian; Russell, James

2013-12-01

The morphology of the migrating terdiurnal tide with zonal wavenumber 3 (TW3) in the mesosphere and lower thermosphere (MLT) is revealed using the TIMED satellite datasets from the Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) and the TIMED Doppler Interferometer (TIDI) instruments from 2002 to 2009, as well as the Thermosphere Ionosphere Mesosphere Electrodynamics General Circulation Model (TIME-GCM). The annual mean structures of the TW3 from the TIME-GCM clearly resemble the first real symmetric (3,3) Hough mode. The TW3 temperature and zonal wind components have three peaks at midlatitudes and near the equator, while the TW3 meridional wind components show four peaks at mid and low latitudes. These features are consistent with those resolved in SABER temperature and TIDI zonal wind above ~95 km. TW3 components in the TIME-GCM are stronger during winter and spring months at midlatitudes, which is in agreement with previous ground-based radar measurements. On the other hand, TW3 components of temperature, zonal and meridional winds from SABER and TIDI display different seasonal variations at different altitudes and latitudes. The results presented in this paper will provide an observational basis for further modeling study of terdiurnal tide impacts on the thermosphere and ionosphere.

TEM heat transport and fluctuations in the HSX stellarator: experiments and comparison with gyrokinetic simulation

NASA Astrophysics Data System (ADS)

Smoniewski, J.; Faber, B. J.; Sánchez, E.; Calvo, I.; Pueschel, M. J.; Likin, K. M.; Deng, C. B.; Talmadge, J. N.

2017-10-01

The Helically Symmetric eXperiment (HSX) has demonstrated reduced neoclassical transport in the plasma core with quasi-symmetry [Lore Thesis 2010], while outside this region the electron thermal diffusivity is well above the neoclassical level, likely due to the Trapped Electron Mode (TEM) [Weir PoP 2015, Faber PoP 2015]. We compare gyrokinetic simulations of the TEM to experimental heat flux and density fluctuation measurements for two configurations: Quasi-Helical Symmetry (QHS) and broken symmetry (Mirror). Both experiment and simulation show that the heat flux for Mirror is larger than for QHS by about a factor of two. Initial interferometer measurements provide evidence that density-gradient-driven TEMs are driving turbulence. Calculations of the collisionless damping of zonal flows provide another perspective into the difference between geometries. Similar to other stellarators [Monreal PPCF 2016], the zonal flow residual goes to zero at long wavelengths in both configurations. Additionally, the very short time decay of the zonal flow due to neoclassical polarization is constant between configurations. However, the collisionless damping time is longer and the zonal flow oscillation frequency is smaller in QHS than Mirror, consistent with reduced radial particle drifts. Work supported by the US DOE under Grant DE-FG02-93ER54222.

The transformation of vegetation vertical zonality affected by anthropogenic impact in East Fennoscandia (Russia)

NASA Astrophysics Data System (ADS)

Sidorik, Vadim; Miulgauzen, Daria

2017-04-01

Ecosystems of East Fennoscandia have been affected by intensive anthropogenic influence that resulted in their significant transformation. Study of ecosystems in the framework of vegetation vertical zonality disturbance as well as its recovery allows to understand the trends of anthropogenically induced changes. The aim of the present research is the comparative analysis of vegetation vertical zonality of the two uplands in East Fennoscandia which may be considered as unaffected and affected by anthropogenic impact. The objects of key studies carried out in the north-west of Kola Peninsula in the vicinity of the Pechenganikel Mining and Metallurgical Plant are represented by ecosystems of Kalkupya (h 357 m) and Hangaslachdenvara (h 284 m) uplands. They are characterized by the similarity in sequence of altitudinal belts due to the position on the northern taiga - forest-tundra boundary. Plant communities of Kalkupya upland have no visible signs of anthropogenic influence, therefore, they can be considered as model ecosystems of the area. The sequence of altitudinal belts is the following: - up to 200 m - pine subshrub and green moss ("zonal") forest replaced by mixed pine and birch forest near the upper boundary; - 200-300 m - birch crooked subshrub wood; - above 300 m - tundra subshrub and lichen communities. Ecosystems of Hangaslachdenvara upland have been damaged by air pollution (SO2, Ni, Cu emissions) of the Pechenganikel Plant. This impact has led to plant community suppression and formation of barren lands. Besides the soil cover was significantly disturbed, especially upper horizons. Burying of soil profiles, represented by Podzols (WRB, 2015), also manifested itself in the exploited part of the area. The vegetation cover of Hangaslachdenvara upland is the following: - up to 130 m - birch and aspen subshrub and grass forest instead of pine forest ("zonal"); - 130-200 m - barren lands instead of pine forest ("zonal"); - above 200 m - barren lands instead of birch crooked subshrub wood, which stretched to the north-east, proving the leading role of prevailing southwestern winds in pollution spreading in the area. As the anthropogenic impact decreases due to the Plant's emissions decline, there have been identified signs of ecosystem restoration. The beginning restoration helps parvifoliate forests to grow in barren lands, including the above-mentioned birch and aspen forest on Hangaslachdenvara upland. Reductive processes of soil formation are responsible for the development of soddy or raw humus horizons in the substrate overlaying the well-developed Podzols. Nevertheless, there is no restoration above 130 m on Hangaslachdenvara upland owing to the barrier effect, in other words, intensive deposition and accumulation of air pollutants on the upland's top. Thus, there has been defined that the anthropogenic impact led to total vegetation vertical zonality modification and physical disturbance of soil cover in East Fennoscandia. The typical taiga scheme of "coniferous forest - birch crooked wood - tundra subshrub and lichen communities" altitudinal belts was replaced by that of "parvifoliate forest - barren land" altitudinal belts. However, after the reduction of anthropogenic influence "zonal" plant communities begin to restore gradually and weak developed soils are forming.

Jupiter cloud morphology and zonal winds from ground-based observations during Juno's first year around Jupiter

NASA Astrophysics Data System (ADS)

Hueso, R.; Sánchez-Lavega, A.; Gómez-Forrellad, J. M.; Rojas, J. F.; Pérez-Hoyos, S.; Sanz-Requena, J. F.; Peralta, J.; Ordonez-Etxeberria, I.; Chen-Chen, H.; Mendikoa, I.; Peach, D.; Go, C.; Wesley, A.; Miles, P.; Olivetti, T.

2017-09-01

We present an analysis of Jupiter's atmospheric activity over Juno's first year around the planet based on ground-based observations. We present variability of the zonal winds associated to large outbreaks of convective activity at different belts in the planet, a study of short-scale atmospheric waves at low latitudes and examine polar views of the planet that can be compared with JunoCam observations.

Hubble Space Telescope observations of the 1990 equatorial disturbance on Saturn - Zonal winds and central meridian albedos

NASA Astrophysics Data System (ADS)

Barnet, C. D.; Westphal, J. A.; Beebe, R. F.; Huber, L. F.

1992-12-01

The present comparison of two sets of HST data from August and November 1990 with Voyager 1 and 2 data acquired in 1980 and 1981 gives attention to Saturn's equatorial-region disturbance of September 1990. Longitudinal variations in the equatorial zonal winds are interpreted as evidence for interaction between the storm nucleus that was generated during the disturbance and the local wind field.

Reduction of granular drag inspired by self-burrowing rotary seeds

NASA Astrophysics Data System (ADS)

Jung, Wonjong; Choi, Sung Mok; Kim, Wonjung; Kim, Ho-Young

2017-04-01

We present quantitative measurements and mat hematical analysis of the granular drag reduction by rotation, as motivated by the digging of Erodium and Pelargonium seeds. The seeds create a motion to dig into soil before germination using their moisture-responsive awns, which are originally helical shaped but reversibly deform to a linear configuration in a humid environment. We show that the rotation greatly lowers the resistance of soil against penetration because grain rearrangements near the intruder change the force chain network. We find a general correlation for the drag reduction by relative slip, leading to a mathematical model for the granular drag of a rotating intruder. In addition to shedding light on the mechanics of a rotating body in granular media, this work can guide us to design robots working in granular media with enhanced maneuverability.

New isolates of carnation Italian ringspot virus differ from the original one by having replication-associated proteins with a typical tombusvirus-like N-terminus and by inducing peroxisome- rather than mitochondrion-derived multivesicular bodies.

PubMed

Koenig, Renate; Lesemann, Dietrich-Eckhardt; Pfeilstetter, Ernst

2009-01-01

Five new isolates of carnation Italian ringspot virus (CIRV) from cherry trees, Gypsophila and surface water differ from the original carnation isolate (CIRV-car) and also from Pelargonium necrotic spot virus (PelNSV) by having an ORF 1/ORF1-RT with a typical tombusvirus-like 5'end and by inducing the formation of peroxisome- rather than mitochondrion-derived multivesicular bodies (MVBs). This supports with natural isolates earlier conclusions reached by others with artificially produced hybrid viruses that the 5'end of ORF 1 determines from which organelle the MBVs will be derived. CIRV-car might have resulted from a natural recombination event with genome elements of a PelNSV-like virus.

Modulation of Bjerknes feedback on the decadal variations in ENSO predictability

NASA Astrophysics Data System (ADS)

Zheng, Fei; Fang, Xiang-Hui; Zhu, Jiang; Yu, Jin-Yi; Li, Xi-Chen

2016-12-01

Clear decadal variations exist in the predictability of the El Niño-Southern Oscillation (ENSO), with the most recent decade having the lowest ENSO predictability in the past six decades. The Bjerknes Feedback (BF) intensity, which dominates the development of ENSO, has been proposed to determine ENSO predictability. Here we demonstrate that decadal variations in BF intensity are largely a result of the sensitivity of the zonal winds to the zonal sea level pressure (SLP) gradient in the equatorial Pacific. Furthermore, the results show that during low-ENSO predictability decades, zonal wind anomalies over the equatorial Pacific are more linked to SLP variations in the off-equatorial Pacific, which can then transfer this information into surface temperature and precipitation fields through the BF, suggesting a weakening in the ocean-atmosphere coupling in the tropical Pacific. This result indicates that more attention should be paid to off-equatorial processes in the prediction of ENSO.

High-Frequency Orographically Forced Variability in a Single-Layer Model of the Martian Atmosphere

NASA Technical Reports Server (NTRS)

Keppenne, C. L.; Ingersoll, A. P.

1993-01-01

A shallow water model with realistic topography and idealized zonal wind forcing is used toinvestigate orographically forced modes in the Martian atmosphere. Locally, the model reproduceswell the climatology at the sites of Viking Lander I and II (VL1 and VL2) as inferred from theViking Lander fall and spring observations. Its variability at those sites is dominated by a 3-sol(Martian solar day) oscillation in the region of VL1 and by a 6-sol oscillation in that of VL2. Theseoscillations are forced by the zonal asymmetries of the Martian mountain field. It is suggested thatthey contribute to the observed variability by reinforcing the baroclinic oscillations with nearbyperiods identified in observational studies. The spatial variability associated with the orographicallyforced oscillations is studied by means of extended empirical orthogonal function analysis. The 3-solVL1 oscillation corresponds to a tropical, eastward-traveling, zonal-wavenumber one pattern...

Elevated Tropospheric Ozone over the Atlantic

NASA Technical Reports Server (NTRS)

Chandra, S.; Ziemke, J. R.; Tie, X.

2003-01-01

Tropospheric column ozone (TCO) is derived from differential measurements of TOMS total column ozone and Microwave Limb Sounder stratospheric column ozone. It is shown that TCO during summer months over the Atlantic and Pacific Oceans in northern midlatitudes is about the same (50 to 60 Dobson Units) as over the continents of North America, Europe, and Asia, where surface emissions of nitrogen oxides from industrial sources, biomass and biofuel burning and biogenic emissions are significantly larger. This nearly uniform zonal variation in TCO is modulated by surface topography of the Rocky and Himalayan mountains, and Tibetan plateau where TCO is reduced by 20 to 30 Dobson Units. The zonal variation in TCO is well simulated by a global chemical transport model called MOZART-2 (Model of Ozone and Related Chemical Tracers, version 2). The model results are analyzed to delineate the relative importance of various processes contributing to observed zonal characteristics of TCO.

Diffusion of Zonal Variables Using Node-Centered Diffusion Solver

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yang, T B

2007-08-06

Tom Kaiser [1] has done some preliminary work to use the node-centered diffusion solver (originally developed by T. Palmer [2]) in Kull for diffusion of zonal variables such as electron temperature. To avoid numerical diffusion, Tom used a scheme developed by Shestakov et al. [3] and found their scheme could, in the vicinity of steep gradients, decouple nearest-neighbor zonal sub-meshes leading to 'alternating-zone' (red-black mode) errors. Tom extended their scheme to couple the sub-meshes with appropriate chosen artificial diffusion and thereby solved the 'alternating-zone' problem. Because the choice of the artificial diffusion coefficient could be very delicate, it is desirablemore » to use a scheme that does not require the artificial diffusion but still able to avoid both numerical diffusion and the 'alternating-zone' problem. In this document we present such a scheme.« less

Numerical solution of the full potential equation using a chimera grid approach

NASA Technical Reports Server (NTRS)

Holst, Terry L.

1995-01-01

A numerical scheme utilizing a chimera zonal grid approach for solving the full potential equation in two spatial dimensions is described. Within each grid zone a fully-implicit approximate factorization scheme is used to advance the solution one interaction. This is followed by the explicit advance of all common zonal grid boundaries using a bilinear interpolation of the velocity potential. The presentation is highlighted with numerical results simulating the flow about a two-dimensional, nonlifting, circular cylinder. For this problem, the flow domain is divided into two parts: an inner portion covered by a polar grid and an outer portion covered by a Cartesian grid. Both incompressible and compressible (transonic) flow solutions are included. Comparisons made with an analytic solution as well as single grid results indicate that the chimera zonal grid approach is a viable technique for solving the full potential equation.

Global variations of zonal mean ozone during stratospheric warming events

NASA Technical Reports Server (NTRS)

Randel, William J.

1993-01-01

Eight years of Solar Backscatter Ultraviolet (SBUV) ozone data are examined to study zonal mean variations associated with stratospheric planetary wave (warming) events. These fluctuations are found to be nearly global in extent, with relatively large variations in the tropics, and coherent signatures reaching up to 50 deg in the opposite (summer) hemisphere. These ozone variations are a manifestation of the global circulation cells associated with stratospheric warming events; the ozone responds dynamically in the lower stratosphere to transport, and photochemically in the upper stratosphere to the circulation-induced temperature changes. The observed ozone variations in the tropics are of particular interest because transport is dominated by zonal-mean vertical motions (eddy flux divergences and mean meridional transports are negligible), and hence, substantial simplifications to the governing equations occur. The response of the atmosphere to these impulsive circulation changes provides a situation for robust estimates of the ozone-temperature sensitivity in the upper stratosphere.

On the association between the recent episode of the quasi-biennial oscillation and the strong El Niño event

NASA Astrophysics Data System (ADS)

Varotsos, Costas A.; Sarlis, Nikos V.; Efstathiou, Maria

2017-07-01

Since February 2016, the equatorial quasi-biennial oscillation (QBO) in zonal wind of the lower stratosphere exhibited anomalous behavior. In more detail, it broke down from its typical pattern and the eastward stratospheric winds unexpectedly reversed to a westward direction. We herewith attempt to detect whether this unprecedented event could be considered as a result of plausible long-range correlations in the QBO temporal evolution. The analyses performed using all the available QBO data sets showed that such an interpretation could not be inferred, because the temporal evolution of the equatorial zonal wind in the lower stratosphere does not exhibit power-law behavior. Further, the natural time analysis of the QBO data indicates precursory behavior before the maximization of the zonal wind velocity and that the recent strong El Niño event might be related with the aforementioned unprecedented behavior.

Trapped waves on the mid-latitude β-plane

NASA Astrophysics Data System (ADS)

Paldor, Nathan; Sigalov, Andrey

2008-08-01

A new type of approximate solutions of the Linearized Shallow Water Equations (LSWE) on the mid-latitude β-plane, zonally propagating trapped waves with Airy-like latitude-dependent amplitude, is constructed in this work, for sufficiently small radius of deformation. In contrast to harmonic Poincare and Rossby waves, these newly found trapped waves vanish fast in the positive half-axis, and their zonal phase speed is larger than that of the corresponding harmonic waves for sufficiently large meridional domains. Our analysis implies that due to the smaller radius of deformation in the ocean compared with that in the atmosphere, the trapped waves are relevant to observations in the ocean whereas harmonic waves typify atmospheric observations. The increase in the zonal phase speed of trapped Rossby waves compared with that of harmonic ones is consistent with recent observations that showed that Sea Surface Height features propagated westwards faster than the phase speed of harmonic Rossby waves.

Design for and efficient dynamic climate model with realistic geography

NASA Technical Reports Server (NTRS)

Suarez, M. J.; Abeles, J.

1984-01-01

The long term climate sensitivity which include realistic atmospheric dynamics are severely restricted by the expense of integrating atmospheric general circulation models are discussed. Taking as an example models used at GSFC for this dynamic model is an alternative which is of much lower horizontal or vertical resolution. The model of Heid and Suarez uses only two levels in the vertical and, although it has conventional grid resolution in the meridional direction, horizontal resolution is reduced by keeping only a few degrees of freedom in the zonal wavenumber spectrum. Without zonally asymmetric forcing this model simulates a day in roughly 1/2 second on a CRAY. The model under discussion is a fully finite differenced, zonally asymmetric version of the Heid-Suarez model. It is anticipated that speeds can be obtained a few seconds a day roughly 50 times faster than moderate resolution, multilayer GCM's.

Center for the Study of Plasma Microturbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parker, Scott E.

We have discovered a possible "natural fueling" mechanism in tokamak fusion reactors using large scale gyrokinetic turbulence simulation. In the presence of a heat flux dominated tokamak plasma, cold ions naturally pinch radially inward. If cold DT fuel is introduced near the edge using shallow pellet injection, the cold fuel will pinch inward, at the expense of hot helium ash going radially outward. By adjusting the cold DT fuel concentration, the core DT density profiles can be maintained. We have also shown that cold source ions from edge recycling of cold neutrals are pinched radially inward. This mechanism may bemore » important for fully understanding the edge pedestal buildup after an ELM crash. Work includes benchmarking the gyrokinetic turbulence codes in the electromagnetic regime. This includes cyclone base case parameters with an increasing plasma beta. The code comparisons include GEM, GYRO and GENE. There is good linear agreement between the codes using the Cyclone base case, but including electromagnetics and scanning the plasma beta. All the codes have difficulty achieving nonlinear saturation as the kinetic ballooning limit is approached. GEM does not saturate well when beta gets above about 1/2 of the ideal ballooning limit. We find that the lack of saturation is due to the long wavelength k{sub y} modes being nonlinearly pumped to high levels. If the fundamental k{sub y} mode is zeroed out, higher values of beta nonlinearly saturate well. Additionally, there have been studies to better understand CTEM nonlinear saturation and the importance of zonal flows. We have continued our investigation of trapped electron mode (TEM) turbulence. More recently, we have focused on the nonlinear saturation of TEM turbulence. An important feature of TEM is that in many parameter regimes, the zonal flow is unimportant. We find that when zonal flows are unimportant, zonal density is the dominant saturation mechanism. We developed a simple theory that agrees with the simulation and predicts zonal density generation and feedback stabilization of the most unstable mode even in the absence of zonal flow. We are using GEM to simulate NSTX discharges. We have also done verification and validation on DIII-D. Good agreement with GYRO and DIII-D flux levels were reported in the core region.« less

Role of entrainment in convectively-coupled equatorial waves in an aquaplanet model

NASA Astrophysics Data System (ADS)

Peatman, Simon; Methven, John; Woolnough, Steve

2016-04-01

Equatorially-trapped waves are known to be one of the key phenomena in determining the distribution of convective precipitation in the tropics as well as being crucial to the dynamics of the Madden-Julian Oscillation. However, numerical weather prediction models struggle to sustain such waves for a realistic length of time, which has a significant impact on forecasting precipitation for regions such as equatorial Africa. It has been found in the past that enhancing the rate of moisture entrainment can improve certain aspects of parametrized tropical convection in climate models. A parameter F controls the rate of entrainment into the convective plume for deep- and mid-level convection, with F = 1 denoting the control case. Here it is found in an aquaplanet simulation that F > 1 produces more convective precipitation at all zonal wavenumbers. Furthermore, Kelvin wave activity increases for waves with low frequency and zonal wavenumber but is slightly suppressed for shorter, higher-frequency waves, and vice versa for westward-propagating waves. A change in entrainment rate also brings about a change in the basic state wind and humidity fields. Therefore, the question arises as to whether changes in wave activity are due directly to changes in the coupling to the humidity in the waves by entrainment or due to changes in the basic state. An experiment was devised in which the convective parametrization scheme is allowed to entrain a weighted sum of the environmental humidity and a prescribed zonally-symmetric climatology, with a parameter α controlling the extent of the decoupling from the environment. Experiments with this new mechanism in the parametrization scheme reveal a complex relationship. For long waves at low frequency (period > ˜13 days), removing zonal asymmetry in the humidity seen by the entrainment scheme has very little influence on the ratio of eastward- to westward-propagating power. At higher frequencies and zonal wavenumbers, removing this zonal asymmetry acts to suppress wave activity. Enhanced entrainment rate relative to the control case is also shown to slow the phase speed of Kelvin waves by around 20%. The phase speed depends also on the decoupling parameter α, with the minimum speed occurring around the special case α = 1 - 1/F , when the basic state humidity is entrained at the enhanced rate and perturbations from it are entrained at the control rate.

Toward a Global 1/25deg HYCOM Ocean Prediction System with Tides

DTIC Science & Technology

2009-01-01

global, regional, and coastal applications. Figure 1 shows the cross-vertical section of the zonal baroclinic velocity after 5 days for two of the...Lorenzo et al., 2003). Figure 1: Snapshots (~4.7 days) of cross-vertical section of zonal baroclinic velocity for HYCOM (left panels) and ROMS...MITgcm, we used two idealized configurations: 1) the well known lock exchange problem (Haidvogel and Beckman, 1999) as a reference and 2) the pure

A study of quasi-biennial oscillation in the tropical stratosphere

NASA Astrophysics Data System (ADS)

Sasi, M. N.; Krishna Murthy, B. V.

1991-12-01

The characteristics of the quasi-biennial oscillation in zonal wind and temperature at Trivandrum (8.5°N, 77°E) have been studied using data covering 16 years. Similar study has been carried out for zonal wind at Balasore (21.5°N, 87°E) using data covering 9 years. The cycle to cycle variation of amplitudes, their altitude variation, periods and descent rates of the westerly and easterly regimes have been studied.

Algorithms for Zonal Methods and Development of Three Dimensional Mesh Generation Procedures.

DTIC Science & Technology

1984-02-01

a r-re complete set of equations is used, but their effect is imposed by means of a right hand side forcing function, not by means of a zonal boundary...modifications of flow-simulation algorithms The explicit finite-difference code of Magnus and are discussed. Computational tests in two dimensions...used to simplify the task of grid generation without an adverse achieve computational efficiency. More recently, effect on flow-field algorithms and

Gunshot wounds to the thigh. Evaluation of vascular and subclinical vascular injuries.

PubMed

Payne, W K; Gabriel, R A; Massoud, R P

1995-01-01

A retrospective review of 173 patient charts, angiograms, surgical reports, and plain radiographs were performed for all patients admitted with gunshot wounds to the thigh from May 1988 to January 1991 at Martin Luther King, Jr. Hospital. A zonal classification of gunshot wounds to the thigh was created and defined to determine if a zonal classification was predictive of a positive angiogram. Associations and relationships of patients with vascular injury are presented.

Geographical analysis of equatorial plasma bubbles by GPS and nightglow measurements

NASA Astrophysics Data System (ADS)

Nade, D. P.; Shetti, D. J.; Sharma, A. K.; Taori, A.; Chavan, G. A.; Patil, P. T.; Ghodpage, R. N.; Gurav, O. B.; Nikte, S. S.

2015-11-01

This work about the zonal drift velocity and signature of equatorial plasma bubbles (EPBs) by measurements of global positioning system (GPS) receiver and all sky imager (ASI) operating in India, at the low latitude region. The optical and radio observations have been made from Kolhapur (16.8° N, 74.2° E) and Hyderabad (17.37°N, 78.48°E), respectively. The zonal drift velocity of EPBs has estimated using images of nightglow OI 630.0 nm emission recorded by ASI at Kolhapur. The measurements of total electron content (TEC) using the GPS have carried from the nearby station, Hyderabad. When depletions occurred about 00:37 h (IST) in TEC, the EPBs were found to occur about 5:30 h in optical data of OI 630.0 nm emission. This work focuses on simultaneous measurements of TEC and intensity of OI 630.0 nm emissions for EPBs during nighttime. The occurrence period of EPBs in TEC and OI 630.0 nm has found to be different. To study this difference, the zonal drift velocity of EPBs has established. The averaged eastward velocity of EPBs was found to be 138 m/s. The calculated values of zonal drift velocities are well correlated with that of the empirical model values. This work may be helpful in finding the growth of EPBs over low latitude.

MPIRUN: A Portable Loader for Multidisciplinary and Multi-Zonal Applications

NASA Technical Reports Server (NTRS)

Fineberg, Samuel A.; Woodrow, Thomas S. (Technical Monitor)

1994-01-01

Multidisciplinary and multi-zonal applications are an important class of applications in the area of Computational Aerosciences. In these codes, two or more distinct parallel programs or copies of a single program are utilized to model a single problem. To support such applications, it is common to use a programming model where a program is divided into several single program multiple data stream (SPMD) applications, each of which solves the equations for a single physical discipline or grid zone. These SPMD applications are then bound together to form a single multidisciplinary or multi-zonal program in which the constituent parts communicate via point-to-point message passing routines. One method for implementing the message passing portion of these codes is with the new Message Passing Interface (MPI) standard. Unfortunately, this standard only specifies the message passing portion of an application, but does not specify any portable mechanisms for loading an application. MPIRUN was developed to provide a portable means for loading MPI programs, and was specifically targeted at multidisciplinary and multi-zonal applications. Programs using MPIRUN for loading and MPI for message passing are then portable between all machines supported by MPIRUN. MPIRUN is currently implemented for the Intel iPSC/860, TMC CM5, IBM SP-1 and SP-2, Intel Paragon, and workstation clusters. Further, MPIRUN is designed to be simple enough to port easily to any system supporting MPI.

Zero potential vorticity envelopes for the zonal-mean velocity of the Venus/Titan atmospheres

NASA Technical Reports Server (NTRS)

Allison, Michael; Del Genio, Anthony D.; Zhou, Wei

1994-01-01

The diagnostic analysis of numerical simulations of the Venus/Titan wind regime reveals an overlooked constraint upon the latitudinal structure of their zonal-mean angular momentum. The numerical experiments, as well as the limited planetary observations, are approximately consistent with the hypothesis that within the latitudes bounded by the wind maxima the total Ertel potential vorticity associated with the zonal-mean motion is approximately well mixed with respect to the neutral equatorial value for a stable circulation. The implied latitudinal profile of angular momentum is of the form M equal to or less than M(sub e)(cos lambda)(exp 2/Ri), where lambda is the latitude and Ri the local Richardson number, generally intermediate between the two extremes of uniform angular momentum (Ri approaches infinity) and uniform angular velocity (Ri = 1). The full range of angular momentum profile variation appears to be realized within the observed meridional - vertical structure of the Venus atmosphere, at least crudely approaching the implied relationship between stratification and zonal velocity there. While not itself indicative of a particular eddy mechanism or specific to atmospheric superrotation, the zero potential vorticity (ZPV) constraint represents a limiting bound for the eddy - mean flow adjustment of a neutrally stable baroclinic circulation and may be usefully applied to the diagnostic analysis of future remote sounding and in situ measurements from planetary spacecraft.

Influence of the parallel nonlinearity on zonal flows and heat transport in global gyrokinetic particle-in-cell simulations

NASA Astrophysics Data System (ADS)

Jolliet, S.; McMillan, B. F.; Vernay, T.; Villard, L.; Hatzky, R.; Bottino, A.; Angelino, P.

2009-07-01

In this paper, the influence of the parallel nonlinearity on zonal flows and heat transport in global particle-in-cell ion-temperature-gradient simulations is studied. Although this term is in theory orders of magnitude smaller than the others, several authors [L. Villard, P. Angelino, A. Bottino et al., Plasma Phys. Contr. Fusion 46, B51 (2004); L. Villard, S. J. Allfrey, A. Bottino et al., Nucl. Fusion 44, 172 (2004); J. C. Kniep, J. N. G. Leboeuf, and V. C. Decyck, Comput. Phys. Commun. 164, 98 (2004); J. Candy, R. E. Waltz, S. E. Parker et al., Phys. Plasmas 13, 074501 (2006)] found different results on its role. The study is performed using the global gyrokinetic particle-in-cell codes TORB (theta-pinch) [R. Hatzky, T. M. Tran, A. Könies et al., Phys. Plasmas 9, 898 (2002)] and ORB5 (tokamak geometry) [S. Jolliet, A. Bottino, P. Angelino et al., Comput. Phys. Commun. 177, 409 (2007)]. In particular, it is demonstrated that the parallel nonlinearity, while important for energy conservation, affects the zonal electric field only if the simulation is noise dominated. When a proper convergence is reached, the influence of parallel nonlinearity on the zonal electric field, if any, is shown to be small for both the cases of decaying and driven turbulence.

Effect of velocity boundary conditions on the heat transfer and flow topology in two-dimensional Rayleigh-Bénard convection.

PubMed

van der Poel, Erwin P; Ostilla-Mónico, Rodolfo; Verzicco, Roberto; Lohse, Detlef

2014-07-01

The effect of various velocity boundary condition is studied in two-dimensional Rayleigh-Bénard convection. Combinations of no-slip, stress-free, and periodic boundary conditions are used on both the sidewalls and the horizontal plates. For the studied Rayleigh numbers Ra between 10(8) and 10(11) the heat transport is lower for Γ=0.33 than for Γ=1 in case of no-slip sidewalls. This is, surprisingly, the opposite for stress-free sidewalls, where the heat transport increases for a lower aspect ratio. In wider cells the aspect-ratio dependence is observed to disappear for Ra ≥ 10(10). Two distinct flow types with very different dynamics can be seen, mostly dependent on the plate velocity boundary condition, namely roll-like flow and zonal flow, which have a substantial effect on the dynamics and heat transport in the system. The predominantly horizontal zonal flow suppresses heat flux and is observed for stress-free and asymmetric plates. Low aspect-ratio periodic sidewall simulations with a no-slip boundary condition on the plates also exhibit zonal flow. In all the other cases, the flow is roll like. In two-dimensional Rayleigh-Bénard convection, the velocity boundary conditions thus have large implications on both roll-like and zonal flow that have to be taken into consideration before the boundary conditions are imposed.

Wave kinetics of drift-wave turbulence and zonal flows beyond the ray approximation

NASA Astrophysics Data System (ADS)

Zhu, Hongxuan; Zhou, Yao; Ruiz, D. E.; Dodin, I. Y.

2018-05-01

Inhomogeneous drift-wave turbulence can be modeled as an effective plasma where drift waves act as quantumlike particles and the zonal-flow velocity serves as a collective field through which they interact. This effective plasma can be described by a Wigner-Moyal equation (WME), which generalizes the quasilinear wave-kinetic equation (WKE) to the full-wave regime, i.e., resolves the wavelength scale. Unlike waves governed by manifestly quantumlike equations, whose WMEs can be borrowed from quantum mechanics and are commonly known, drift waves have Hamiltonians very different from those of conventional quantum particles. This causes unusual phase-space dynamics that is typically not captured by the WKE. We demonstrate how to correctly model this dynamics with the WME instead. Specifically, we report full-wave phase-space simulations of the zonal-flow formation (zonostrophic instability), deterioration (tertiary instability), and the so-called predator-prey oscillations. We also show how the WME facilitates analysis of these phenomena, namely, (i) we show that full-wave effects critically affect the zonostrophic instability, particularly its nonlinear stage and saturation; (ii) we derive the tertiary-instability growth rate; and (iii) we demonstrate that, with full-wave effects retained, the predator-prey oscillations do not require zonal-flow collisional damping, contrary to previous studies. We also show how the famous Rayleigh-Kuo criterion, which has been missing in wave-kinetic theories of drift-wave turbulence, emerges from the WME.

Jovian Vortices and Barges: HST observations 1994-1998

NASA Astrophysics Data System (ADS)

Morales, R.; Sanchez-Lavega, A.; Lecacheux, J.; Colas, F.; Miyazaki, I.

2000-10-01

We have used the HST-WFPC2 archived images of Jupiter in the period 1994-1998 to study the zonal and meridional distributions, long-term motions, lifetimes, interactions and other properties of the vortices larger than 2 degrees. The latitude range covered spans from +75 to -75 degrees. High-resolution images obtained with the 890nm, 410nm and 953nm wavelength filters allowed us to make a morphological classification based on their appearance in each filter. The vortices are anticyclones, and their long-term motions have been completed with ground-based images and are compared to the mean Jovian zonal wind profile. Significant differences are found between the vortex velocities and the mean zonal winds. Some vortices exhibited important drift changes in short period times. We analyze a possible correlation between their size and zonal wind velocity. On the other hand, the "barges" lie in the cyclone domains of the wind-profile and have been identified in several latitudes. Their latitudinal size is similar in all of them (typically 1.6 degrees) but their longitudinal size ranges from 1 to 32 degrees. We discuss the temporal evolution of some of these cyclonic regions. The Spanish team was supported by Gobierno Vasco PI 034/97. The French team was supported by the "Programme National de Planetologie." RM acknowledges a fellowship from Universidad Pais Vasco.

Use of satellite data and modeling to assess the influence of stratospheric processes on the troposphere

NASA Astrophysics Data System (ADS)

Nathan, Terrence

1991-09-01

Over the past forty years, numerous linear stability studies have been performed in order to explain the origin and structure of observed waves in the atmosphere. Of these studies, only a small fraction have considered the stability of time-dependent, zonally varying flow or the influence of radiative-photochemical feedbacks on the stability of zonally uniform flow. The stability of such flows is described, and these flows may yield important information concerning the origin, structure, and transient time scales of free waves in the atmosphere. During the period 1990 to 1991, a beta-plane model that couples radiative transfer, ozone advection, and ozone photochemistry with the quasigeostrophic dynamical circulation was developed in order to study the diabatic effects of Newtonian cooling and ozone-dynamics interaction on the linear stability of free planetary waves in the atmosphere. The stability of a basic state consisting of a westward-moving wave and a zonal mean jet was examined using a linearized, nondivergent barotropic model on sphere. The sensitivity of the stability of the flow to the strength and structure of the zonal jet was emphasized. The current research is focused on the following problems: (1) examination of the finite amplitude interactions among radiation, ozone, and dynamics; and (2) examination of the role of seasonal forcing in short-term climate variability. The plans for next year are presented.

Antisecretory activity of plants used to treat gastrointestinal disorders in Mexico.

PubMed

Velázquez, Claudia; Calzada, Fernando; Torres, Javier; González, Felipe; Ceballos, Guillermo

2006-01-03

Aqueous and methanolic extracts from 26 medicinal plants used in Mexico to treat gastrointestinal disorders were screened to evaluate their antisecretory activity on cholera toxin-induced intestinal secretion in rat jejunal loops model. Extracts were tested at a dose of 300 mg/kg. From 56 samples tested, both extracts from Chiranthodendron pentadactylon, Hippocratea excelsa and Ocimum basilicum were the most potent with inhibition values ranging from 68.0 to 87.6%. On the other hand, the methanolic extract of Geranium mexicanum (aerial parts) and the aqueous extract of Bocconia frutescens showed the highest activity with inhibition values of 93.4 and 86.0%, respectively. The results obtained in this study give some scientific support to the use of the Mexican medicinal plants employed for the treatment of gastrointestinal disorders such as diarrhea.

Decomposing variations of geopotential height in the troposphere and stratosphere into stationary and travelling waves

NASA Astrophysics Data System (ADS)

Guryanov, Vladimir; Eliseev, Alexey

2016-07-01

The ERA-Interim geopotential height in the Northern Hemisphere from November to March, 1992-2015 in the layer from between pressure levels 1000 mb and 1 mb is expanded into stationary and travelling zonal waves with zonal wavenumbers, k, from 1 to 10, and with periods, T, from 2 to 156 days (the so called Hayashi spectra). Among the studied waves, the largest amplitude is attained by the stationary and travelling waves with zonal wavenumber k=1 and with periods from 3 to 4 weeks in the upper stratosphere over the latitudinal belt 60-70oN. The stationary waves with k from 1 to 3 and with T from 2 to 3 weeks are most pronounced in the stratosphere. In turn, the largest amplitudes of the travelling waves with zonal wavenumbers k ≥ 5 are found in the troposphere. The dominant periods of the latter waves are about 1 week or slightly higher, and this dominant period basically decrease with increasing wavenumber. In the upper stratosphere, the eastward travelling waves generally dominate over westward ones. The only exception is the longest zonal mode with k=1, for which the amplitude of the westward travelling wave is larger than that for the eastward one. The period of the travelling waves dominating in the upper stratosphere is close to 3 weeks. In the upper troposphere, the amplitudes of the eastward waves with k from 4 to 10 is several-fold larger than those for their westward counterparts. The latter is reflected in the larger average wavenumber of the eastward travelling wave in comparison to that of the westarward one. The period of the gravest of the dominant travelling waves in the upper troposphere is close to one week, and it decreases to 2-4 days for the dominant travelling waves with k=8-10.

A theory of self-organized zonal flow with fine radial structure in tokamak

NASA Astrophysics Data System (ADS)

Zhang, Y. Z.; Liu, Z. Y.; Xie, T.; Mahajan, S. M.; Liu, J.

2017-12-01

The (low frequency) zonal flow-ion temperature gradient (ITG) wave system, constructed on Braginskii's fluid model in tokamak, is shown to be a reaction-diffusion-advection system; it is derived by making use of a multiple spatiotemporal scale technique and two-dimensional (2D) ballooning theory. For real regular group velocities of ITG waves, two distinct temporal processes, sharing a very similar meso-scale radial structure, are identified in the nonlinear self-organized stage. The stationary and quasi-stationary structures reflect a particular feature of the poloidal group velocity. The equation set posed to be an initial value problem is numerically solved for JET low mode parameters; the results are presented in several figures and two movies that show the spatiotemporal evolutions as well as the spectrum analysis—frequency-wave number spectrum, auto power spectrum, and Lissajous diagram. This approach reveals that the zonal flow in tokamak is a local traveling wave. For the quasi-stationary process, the cycle of ITG wave energy is composed of two consecutive phases in distinct spatiotemporal structures: a pair of Cavitons growing and breathing slowly without long range propagation, followed by a sudden decay into many Instantons that carry negative wave energy rapidly into infinity. A spotlight onto the motion of Instantons for a given radial position reproduces a Blob-Hole temporal structure; the occurrence as well as the rapid decay of Caviton into Instantons is triggered by zero-crossing of radial group velocity. A sample of the radial profile of zonal flow contributed from 31 nonlinearly coupled rational surfaces near plasma edge is found to be very similar to that observed in the JET Ohmic phase [J. C. Hillesheim et al., Phys. Rev. Lett. 116, 165002 (2016)]. The theory predicts an interior asymmetric dipole structure associated with the zonal flow that is driven by the gradients of ITG turbulence intensity.

Use of large-scale atmospheric energetics for understanding the dynamics of contrasting Indian summer monsoon rainfall in different years

NASA Astrophysics Data System (ADS)

Dutta, Somenath; Narkhedkar, Sanjay G.; Mukhopadhyay, Parthasarathi; Yadav, Mamta; Sunitha Devi

2018-06-01

An attempt has been made to understand the dynamics of contrasting Indian summer monsoon rainfall (ISMR) in different years during 1979-2017, from large-scale atmospheric energetics aspects. Daily values of eddy and zonal available potential energy (APE), their generation, eddy and zonal kinetic energy (KE), conversions of zonal KE and eddy APE to eddy KE, and conversions of zonal APE to zonal KE and eddy APE were computed over the region bounded by 65°E-95°E and 5°N-35°N during the period 1 May to 30 September for 39 years (1979-2017), using daily ECMWF reanalyzed atmospheric data at 0.125° × 0.125° resolution (3 components of wind and temperature). ISMR was classified into three categories, viz., deficient and below normal, normal and above normal and excess. The daily anomaly of these energetics parameters in each of these years was computed using jackknife method and then the composite of the daily anomalies of these parameters constructed for the years with the above-mentioned three categories of ISMR. The following salient features emerge from this study: Analysis of composite anomaly shows that in case of excess and above normal (below normal and deficient) ISMR, C(A Z , K Z) was less (more) than normal. In case of excess and above normal (below normal and deficient) ISMR, C(A E , K E) was more (less) than normal. Broadly, C(A Z , A E) was more than normal in the years with deficient and below normal ISMR, whereas it was less than normal for years with excess and above normal ISMR. Broadly, G(A Z) was below normal for the years with above normal and excess ISMR, whereas it was above normal for the years with below normal and deficient ISMR. Total kinetic energy and total conversion to eddy kinetic energy was above normal for the years with above normal and excess ISMR.

Geometrical constraint on the localization of deep water formation

NASA Astrophysics Data System (ADS)

Ferreira, D.; Marshall, J.

2008-12-01

That deep water formation occurs in the North Atlantic and not North Pacific is one of the most notable features of the present climate. In an effort to build a system able to mimic such basic aspects of climate using a minimal description, we study here the influence of ocean geometry on the localization of deep water formation. Using the MIT GCM, two idealized configurations of an ocean-atmosphere-sea ice climate system are studied: Drake and Double-Drake. In Drake, one narrow barrier extends from the North Pole to 35°S while, in Double-Drake, two such barriers set 90° apart join at the North Pole to delimit a Small and a Large basin. Despite the different continental configurations, the two climates are strikingly similar in the zonal average (almost identical heat and fresh water transports, and meridional overturning circulation). However, regional circulations in the Small and Large basins exhibit distinctive Atlantic-like and Pacific-like characteristics: the Small basin is warmer and saltier than the Large one, concentrates dense water formation and deep overturning circulation and achieve the largest fraction of the northward ocean heat transport. We show that the warmer temperature and higher evaporation over the Small basin is not its distinguishing factor. Rather, it is the width of the basin in relation to the zonal fetch of the precipitation pattern. This generates a deficit/excess of precipitation over the Small/Large basin: a fraction of the moisture evaporated from the Small basin is transported zonally and rains out over the Large basin. This creates a salt contrast between the 2 basins, leading to the localization of deep convection in the salty Small basin. Finally, given on the broad similarities between the Double-Drake and real World, we suggest that many gross features that define the present climate are a consequence of 2 asymmetries: a meridional asymmetry (a zonally unblocked southern/blocked northern ocean) and a zonal one (a small and a large basin in the northern hemisphere).

The effects of ground hydrology on climate sensitivity to solar constant variations

NASA Technical Reports Server (NTRS)

Chou, S. H.; Curran, R. J.; Ohring, G.

1979-01-01

The effects of two different evaporation parameterizations on the climate sensitivity to solar constant variations are investigated by using a zonally averaged climate model. The model is based on a two-level quasi-geostrophic zonally averaged annual mean model. One of the evaporation parameterizations tested is a nonlinear formulation with the Bowen ratio determined by the predicted vertical temperature and humidity gradients near the earth's surface. The other is the linear formulation with the Bowen ratio essentially determined by the prescribed linear coefficient.

Dynamic Stall Computations Using a Zonal Navier-Stokes Model

DTIC Science & Technology

1988-06-01

NAVAL POSTGRADUATE SCHOOL lotMonterey ,California CD Lj STATF ,-S THESIS DYNAMIC STALL CALCULATIONS USING A ZONAL.-,_ % 0 NVETESISDE by Jack H...Conroyd, Jr. June 1988 Thesis Co-advisors: M.F. Platzer Lawrence W. Carr Approved for public release; distribution is unlimitedDOTIC , ~~~~~~~~ELECT...OINT %, Master s Thesis OM To June 212 6 SLP;’LEENTARY NOTATION ri The views expressed in this thesis are those of the author and do not reflect the

Zonal flow dynamics and control of turbulent transport in stellarators.

PubMed

Xanthopoulos, P; Mischchenko, A; Helander, P; Sugama, H; Watanabe, T-H

2011-12-09

The relation between magnetic geometry and the level of ion-temperature-gradient (ITG) driven turbulence in stellarators is explored through gyrokinetic theory and direct linear and nonlinear simulations. It is found that the ITG radial heat flux is sensitive to details of the magnetic configuration that can be understood in terms of the linear behavior of zonal flows. The results throw light on the question of how the optimization of neoclassical confinement is related to the reduction of turbulence.

Zonal average earth radiation budget measurements from satellites for climate studies

NASA Technical Reports Server (NTRS)

Ellis, J. S.; Haar, T. H. V.

1976-01-01

Data from 29 months of satellite radiation budget measurements, taken intermittently over the period 1964 through 1971, are composited into mean month, season and annual zonally averaged meridional profiles. Individual months, which comprise the 29 month set, were selected as representing the best available total flux data for compositing into large scale statistics for climate studies. A discussion of spatial resolution of the measurements along with an error analysis, including both the uncertainty and standard error of the mean, are presented.

Relating Nimbus-7 37 GHz data to global land-surface evaporation, primary productivity and the atmospheric CO2 concentration

NASA Technical Reports Server (NTRS)

Choudhury, B. J.

1988-01-01

Global observations at 37 GHz by the Nimbus-7 SMMR are related to zonal variations of land surface evaporation and primary productivity, as well as to temporal variations of atmospheric CO2 concentration. The temporal variation of CO2 concentration and the zonal variations of evaporation and primary productivity are shown to be highly correlated with the satellite sensor data. The potential usefulness of the 37-GHz data for global biospheric and climate studies is noted.

Quantitative analysis of the thermal requirements for stepwise physical dormancy-break in seeds of the winter annual Geranium carolinianum (Geraniaceae)

PubMed Central

Gama-Arachchige, N. S.; Baskin, J. M.; Geneve, R. L.; Baskin, C. C.

2013-01-01

Background and Aims Physical dormancy (PY)-break in some annual plant species is a two-step process controlled by two different temperature and/or moisture regimes. The thermal time model has been used to quantify PY-break in several species of Fabaceae, but not to describe stepwise PY-break. The primary aims of this study were to quantify the thermal requirement for sensitivity induction by developing a thermal time model and to propose a mechanism for stepwise PY-breaking in the winter annual Geranium carolinianum. Methods Seeds of G. carolinianum were stored under dry conditions at different constant and alternating temperatures to induce sensitivity (step I). Sensitivity induction was analysed based on the thermal time approach using the Gompertz function. The effect of temperature on step II was studied by incubating sensitive seeds at low temperatures. Scanning electron microscopy, penetrometer techniques, and different humidity levels and temperatures were used to explain the mechanism of stepwise PY-break. Key Results The base temperature (Tb) for sensitivity induction was 17·2 °C and constant for all seed fractions of the population. Thermal time for sensitivity induction during step I in the PY-breaking process agreed with the three-parameter Gompertz model. Step II (PY-break) did not agree with the thermal time concept. Q10 values for the rate of sensitivity induction and PY-break were between 2·0 and 3·5 and between 0·02 and 0·1, respectively. The force required to separate the water gap palisade layer from the sub-palisade layer was significantly reduced after sensitivity induction. Conclusions Step I and step II in PY-breaking of G. carolinianum are controlled by chemical and physical processes, respectively. This study indicates the feasibility of applying the developed thermal time model to predict or manipulate sensitivity induction in seeds with two-step PY-breaking processes. The model is the first and most detailed one yet developed for sensitivity induction in PY-break. PMID:23456728

Coherency Between Volume Transport in the Antarctic Circumpolar Current and Southern Hemisphere Winds

NASA Astrophysics Data System (ADS)

Makowski, Jessica; Chambers, Don; Bonin, Jennifer

2013-04-01

Previous studies have suggested that ocean bottom pressure (OBP) can be used to measure the transport variability of the Antarctic Circumpolar Current (ACC). The OBP observations from the Gravity Recovery and Climate Experiment (GRACE) will be used to calculate transport along the 150°E longitude choke point, between Antarctica and Australia. We will examine whether zonally averaged wind stress, wind stress curl, or local zonal winds are more coherent with zonal mass transport variability. Preliminary studies suggest that seasonal variation in transport across 150°E is more correlated with winds along and north of the northern front of the ACC: the Sub Tropical front (STF). It also appears that interannual variations in transport along 150°E are related to wind variations south of the STF and centered south of the Sub Antarctic Front (SAF). We have observed a strong anti-correlation across the SAF, in the Indian Ocean, which suggests wind stress curl may also be responsible for transport variations. Preliminary results will be presented.

Measuring Zonal Transport Variability of the Antarctic Circumpolar Current Using GRACE Ocean Bottom Pressure

NASA Astrophysics Data System (ADS)

Makowski, J.; Chambers, D. P.; Bonin, J. A.

2012-12-01

Previous studies have suggested that ocean bottom pressure (OBP) can be used to measure the transport variability of the Antarctic Circumpolar Current (ACC). Using OBP data from the JPL ECCO model and the Gravity Recovery and Climate Experiment (GRACE), we examine the zonal transport variability of the ACC integrated between the major fronts between 2003-2010. The JPL ECCO data are used to determine average front positions for the time period studies, as well as where transport is mainly zonal. Statistical analysis will be conducted to determine the uncertainty of the GRACE observations using a simulated data set. We will also begin looking at low frequency changes and how coherent transport variability is from region to region of the ACC. Correlations with bottom pressure south of the ACC and the average basin transports will also be calculated to determine the probability of using bottom pressure south of the ACC as a means for describing the ACC dynamics and transport.

Large-Scale Flows and Magnetic Fields Produced by Rotating Convection in a Quasi-Geostrophic Model of Planetary Cores

NASA Astrophysics Data System (ADS)

Guervilly, C.; Cardin, P.

2017-12-01

Convection is the main heat transport process in the liquid cores of planets. The convective flows are thought to be turbulent and constrained by rotation (corresponding to high Reynolds numbers Re and low Rossby numbers Ro). Under these conditions, and in the absence of magnetic fields, the convective flows can produce coherent Reynolds stresses that drive persistent large-scale zonal flows. The formation of large-scale flows has crucial implications for the thermal evolution of planets and the generation of large-scale magnetic fields. In this work, we explore this problem with numerical simulations using a quasi-geostrophic approximation to model convective and zonal flows at Re 104 and Ro 10-4 for Prandtl numbers relevant for liquid metals (Pr 0.1). The formation of intense multiple zonal jets strongly affects the convective heat transport, leading to the formation of a mean temperature staircase. We also study the generation of magnetic fields by the quasi-geostrophic flows at low magnetic Prandtl numbers.

Temperature and circulation in the stratospheres of the outer planets

NASA Technical Reports Server (NTRS)

Conrath, Barney J.; Gierasch, Peter J.; Leroy, Stephen S.

1989-01-01

A zonally symmetric, linear radiative-dynamical model is compared with observations of the upper tropospheres and stratospheres of the outer planets. Seasonal variation is included in the model. Friction is parameterized by linear drag (Rayleigh friction). Gas opacities are accounted for but aerosols are omitted. Horizontal temperature gradients are small on all the planets. Seasonal effects are strongest on Saturn and Neptune but are weak even in these cases, because the latitudinal gradient of radiative heating is weak. Seasonal effects on Uranus are extremely weak because the radiative time constant is longer that the orbital period. One free parameter in the model is the frictional time constant. Comparison with observed temperature perturbations over zonal currents in the troposphere shows that the frictional time constant is on the same order as the radiative time constant for all these objects. Vertical motions predicted by the model are extremely weak. They are much smaller than one scale height per orbital period, except in the immediate neighborhood of tropospheric and zonal currents.

Variability simulations with a steady, linearized primitive equations model

NASA Technical Reports Server (NTRS)

Kinter, J. L., III; Nigam, S.

1985-01-01

Solutions of the steady, primitive equations on a sphere, linearized about a zonally symmetric basic state are computed for the purpose of simulating monthly mean variability in the troposphere. The basic states are observed, winter monthly mean, zonal means of zontal and meridional velocities, temperatures and surface pressures computed from the 15 year NMC time series. A least squares fit to a series of Legendre polynomials is used to compute the basic states between 20 H and the equator, and the hemispheres are assumed symmetric. The model is spectral in the zonal direction, and centered differences are employed in the meridional and vertical directions. Since the model is steady and linear, the solution is obtained by inversion of a block, pente-diagonal matrix. The model simulates the climatology of the GFDL nine level, spectral general circulation model quite closely, particularly in middle latitudes above the boundary layer. This experiment is an extension of that simulation to examine variability of the steady, linear solution.

GTC Turbulence Simulations near H-mode Pedestal with Resonant Magnetic Perturbations

NASA Astrophysics Data System (ADS)

Shi, Lei; Ferraro, Nathaniel; Taimourzadeh, Sam; Fu, Jingyuan; Lin, Zhihong; Nazikian, Raffi

2017-10-01

Full plasma responses to Resonant Magnetic Perturbations (RMPs) as provided by the resistive MHD code M3D-C1 are implemented into Gyrokinetic Toroidal Code (GTC) to study the effect of magnetic islands and stochastic field regions on microturbulence in realistic DIII-D geometry. Electrostatic turbulence simulations with adiabatic electrons show no significant increase of the saturated ion heat conductivity in the presence of RMP-induced islands. However, electron response to zonal flow in the presence of magnetic islands and stochastic fields can drastically increase zonal flow dielectric constant for long wavelength fluctuations. Zonal flow generation can then be reduced and the microturbulence can be enhanced greatly. Furthermore, because the RMP magnetic island size is comparable to the ion banana width, electron and ion responses to these islands may be fundamentally different, which could drive non-ambipolar particles fluxes leading to changes of the radial electric field shear. This work is supported by General Atomics subcontract.

Jupiter cloud morphology and zonal winds from ground-based observations before and during Juno's first perijove

NASA Astrophysics Data System (ADS)

Hueso, R.; Sánchez-Lavega, A.; Iñurrigarro, P.; Rojas, J. F.; Pérez-Hoyos, S.; Mendikoa, I.; Gómez-Forrellad, J. M.; Go, C.; Peach, D.; Colas, F.; Vedovato, M.

2017-05-01

We analyze Jupiter observations between December 2015 and August 2016 in the 0.38-1.7 μm wavelength range from the PlanetCam instrument at the 2.2 m telescope at Calar Alto Observatory and in the optical range by amateur observers contributing to the Planetary Virtual Observatory Laboratory. Over this time Jupiter was in a quiescent state without notable disturbances. Analysis of ground-based images and Hubble Space Telescope observations in February 2016 allowed the retrieval of mean zonal winds from -74.5° to +73.2°. These winds did not change over 2016 or when compared with winds from previous years with the sole exception of intense zonal winds at the North Temperate Belt. We also present results concerning the major wave systems in the North Equatorial Belt and in the upper polar hazes visible in methane absorption bands, a description of the planet's overall cloud morphology and observations of Jupiter hours before Juno's orbit insertion.

Application of zonal model on indoor air sensor network design

NASA Astrophysics Data System (ADS)

Chen, Y. Lisa; Wen, Jin

2007-04-01

Growing concerns over the safety of the indoor environment have made the use of sensors ubiquitous. Sensors that detect chemical and biological warfare agents can offer early warning of dangerous contaminants. However, current sensor system design is more informed by intuition and experience rather by systematic design. To develop a sensor system design methodology, a proper indoor airflow modeling approach is needed. Various indoor airflow modeling techniques, from complicated computational fluid dynamics approaches to simplified multi-zone approaches, exist in the literature. In this study, the effects of two airflow modeling techniques, multi-zone modeling technique and zonal modeling technique, on indoor air protection sensor system design are discussed. Common building attack scenarios, using a typical CBW agent, are simulated. Both multi-zone and zonal models are used to predict airflows and contaminant dispersion. Genetic Algorithm is then applied to optimize the sensor location and quantity. Differences in the sensor system design resulting from the two airflow models are discussed for a typical office environment and a large hall environment.

Estimation of Venus wind velocities from high-resolution infrared spectra. Ph.D. Thesis

NASA Technical Reports Server (NTRS)

Smith, M. A. H.

1978-01-01

Zonal velocity profiles in the Venus atmosphere above the clouds were estimated from measured asymmetries of HCl and HF infrared absorption lines in high-resolution Fourier interferometer spectra of the planet. These asymmetries are caused by both pressure-induced shifts in the positions of the hydrogen-halide lines perturbed by CO2 and Doppler shifts due to atmospheric motions. Particularly in the case of the HCl 2-0 band, the effects of the two types of line shifts can be easily isolated, making it possible to estimate a profile of average Venus equatorial zonal velocity as a function of pressure in the region roughly 60 to 70 km above the surface of the planet. The mean profiles obtained show strong vertical shear in the Venus zonal winds near the cloud-top level, and both the magnitude and direction of winds at all levels in this region appear to vary greatly with longitude relative to the sub-solar point.

Feedback process responsible for intermodel diversity of ENSO variability

NASA Astrophysics Data System (ADS)

An, Soon-Il; Heo, Eun Sook; Kim, Seon Tae

2017-05-01

The origin of the intermodel diversity of the El Niño-Southern Oscillation (ENSO) variability is investigated by applying a singular value decomposition (SVD) analysis between the intermodel tropical Pacific sea surface temperature anomalies (SSTA) variance and the intermodel ENSO stability index (BJ index). The first SVD mode features an ENSO-like pattern for the intermodel SSTA variance (74% of total variance) and the dominant thermocline feedback (TH) for the BJ index (51%). Intermodel TH is mainly modified by the intermodel sensitivity of the zonal thermocline gradient response to zonal winds over the equatorial Pacific (βh), and the intermodel βh is correlated higher with the intermodel off-equatorial wind stress curl anomalies than the equatorial zonal wind stress anomalies. Finally, the intermodel off-equatorial wind stress curl is associated with the meridional shape and intensity of ENSO-related wind patterns, which may cause a model-to-model difference in ENSO variability by influencing the off-equatorial oceanic Rossby wave response.

Comparisons of observed seasonal climate features with a winter and summer numerical simulation produced with the GLAS general circulation model

NASA Technical Reports Server (NTRS)

Halem, M.; Shukla, J.; Mintz, Y.; Wu, M. L.; Godbole, R.; Herman, G.; Sud, Y.

1979-01-01

Results are presented from numerical simulations performed with the general circulation model (GCM) for winter and summer. The monthly mean simulated fields for each integration are compared with observed geographical distributions and zonal averages. In general, the simulated sea level pressure and upper level geopotential height field agree well with the observations. Well simulated features are the winter Aleutian and Icelandic lows, the summer southwestern U.S. low, the summer and winter oceanic subtropical highs in both hemispheres, and the summer upper level Tibetan high and Atlantic ridge. The surface and upper air wind fields in the low latitudes are in good agreement with the observations. The geographical distirbutions of the Earth-atmosphere radiation balance and of the precipitation rates over the oceans are well simulated, but not all of the intensities of these features are correct. Other comparisons are shown for precipitation along the ITCZ, rediation balance, zonally averaged temperatures and zonal winds, and poleward transports of momentum and sensible heat.

SPCZ zonal events and downstream influence on surface ocean conditions in the Indonesian Throughflow region

NASA Astrophysics Data System (ADS)

Linsley, Braddock K.; Wu, Henry C.; Rixen, Tim; Charles, Christopher D.; Gordon, Arnold L.; Moore, Michael D.

2017-01-01

Seasonal surface freshening of the Makassar Strait, the main conduit of the Indonesian Throughflow (ITF), is a key factor controlling the ITF. Here we present a 262 year reconstruction of seasonal sea-surface-salinity variability from 1742 to 2004 Common Era by using coral δ18O records from the central Makassar Strait. Our record reveals persistent seasonal freshening and also years with significant truncations of seasonal freshening that correlate exactly with South Pacific Convergence Zone (SPCZ) zonal events >4000 km to the east. During these events, the SPCZ dramatically rotates 15° north to near the equator and stronger westward flowing South Pacific boundary currents force higher-salinity water through the Makassar Strait in February-May halting the normal seasonal freshening in the strait. By these teleconnections, our Makassar coral δ18O series provides the first record of the recurrence interval of these zonal SPCZ events and demonstrates that they have occurred on a semiregular basis since the mid-1700s.

Troposphere-stratosphere (surface-55 km) monthly general circulation statistics for the Northern Hemisphere-four year averages

NASA Technical Reports Server (NTRS)

Wu, M. F.; Geller, M. A.; Olson, J. G.; Gelman, M. E.

1984-01-01

This report presents four year averages of monthly mean Northern Hemisphere general circulation statistics for the period from 1 December 1978 through 30 November 1982. Computations start with daily maps of temperature for 18 pressure levels between 1000 and 0.4 mb that were supplied by NOAA/NMC. Geopotential height and geostrophic wind are constructed using the hydrostatic and geostrophic formulae. Fields presented in this report are zonally averaged temperature, mean zonal wind, and amplitude and phase of the planetary waves in geopotential height with zonal wavenumbers 1-3. The northward fluxes of heat and eastward momentum by the standing and transient eddies along with their wavenumber decomposition and Eliassen-Palm flux propagation vectors and divergences by the standing and transient eddies along with their wavenumber decomposition are also given. Large annual and interannual variations are found in each quantity especially in the stratosphere in accordance with the changes in the planetary wave activity. The results are shown both in graphic and tabular form.

Zonal and tesseral harmonic coefficients for the geopotential function, from zero to 18th order

NASA Technical Reports Server (NTRS)

Kirkpatrick, J. C.

1976-01-01

Zonal and tesseral harmonic coefficients for the geopotential function are usually tabulated in normalized form to provide immediate information as to the relative significance of the coefficients in the gravity model. The normalized form of the geopotential coefficients cannot be used for computational purposes unless the gravity model has been modified to receive them. This modification is usually not done because the absolute or unnormalized form of the coefficients can be obtained from the simple mathematical relationship that relates the two forms. This computation can be quite tedious for hand calculation, especially for the higher order terms, and can be costly in terms of storage and execution time for machine computation. In this report, zonal and tesseral harmonic coefficients for the geopotential function are tabulated in absolute or unnormalized form. The report is designed to be used as a ready reference for both hand and machine calculation to save the user time and effort.

Wind structure and small-scale wind variability in the stratosphere and mesosphere during the November 1980 Energy Budget Campaign

NASA Technical Reports Server (NTRS)

Schmidlin, F. J.; Carlson, M.; Rees, D.; Offermann, D.; Philbrick, C. R.; Widdel, H. U.

1982-01-01

Rocket observations made from two sites in northern Scandinavia between November 6 and December 1, 1980, as part of the Energy Budget Campaign are discussed. It was found that significant vertical and temporal changes in the wind structure were present and that they coincided with different geomagnetic conditions, that is, quiet and enhanced. Before November 16, the meridional wind component above 60 km was found to be positive (southerly), whereas the magnitude of the zonal wind component increased with altitude. After November 16 the meridional component became negative (northerly), and the magnitude of the zonal wind component was observed to decrease with altitude. Time sections of the perturbations of the zonal wind reveal the presence of vertically propagating waves, suggesting gravity wave activity. The waves are found to increase in wavelength from 3-4 km near 40 km to more than 12 km near 80 km. The observational techniques made use of chaff foil, chemical trails, inflatable spheres, and parachutes.

[Massage with aromatherapy: effectiveness on anxiety of users with personality disorders in psychiatric hospitalization].

PubMed

Domingos, Thiago da Silva; Braga, Eliana Mara

2015-06-01

To investigate the effectiveness of aromatherapy massage using the essential oils (0.5%) of Lavandula angustifolia and Pelargonium graveolens for anxiety reduction in patients with personality disorders during psychiatric hospitalization. Uncontrolled clinical trial with 50 subjects submitted to six massages with aromatherapy, performed on alternate days, on the cervical and the posterior thoracic regions. Vital data (heart and respiratory rate) were collected before and after each session and an anxiety scale (Trait Anxiety Inventory-State) was applied at the beginning and end of the intervention. The results were statistically analyzed with the chi square test and paired t test. There was a statistically significant decrease (p < 0.001) of the heart and respiratory mean rates after each intervention session, as well as in the inventory score. Aromatherapy has demonstrated effectiveness in anxiety relief, considering the decrease of heart and respiratory rates in patients diagnosed with personality disorders during psychiatric hospitalization.

[Study on transformation mechanism of SOA from biogenic VOC under UV-B condition].

PubMed

Li, Ying-Ying; Li, Xiang; Chen, Jian-Min

2011-12-01

A laboratory study was carried out to investigate the biogenic volatile organic compounds (BVOC) in a lab-made glass chamber. The secondary organic aerosol (SOA) products can be detected under the UV photooxidation of BVOC. Pelargonium x Citrenella was chosen as the target plant in this research because it can release a large amount of BVOCs. The predominant 7 alkene and ketol compounds were detected by using solid phase microextraction (SPME) sampling and gas chromatography/mass spectrometry (GC/MS) analysis. The photochemical experiment indicated that these BVOC can be rapidly oxidized into SOA under UV-B irradiation. A tandem differential mobility analyzer (TDMA) was used to measure the size distribution and the hygroscopicity of the SOA. The particle diameter was in the range of 50 nm to 320 nm. The high hygroscopicity of SOA was also obtained and the size increased from 1.05 to 1.11 during the wet experiment.

Evolution of the Equatorial Oscillation in Saturn's Stratosphere Between 2005 and 2010 from Cassini/CIRS Limb Data Analysis

NASA Technical Reports Server (NTRS)

Guerlet, S.; Fouchet, T.; Bezard, B.; Flasar, F. M.; Simon-Miller, A. A.

2011-01-01

We present an analysis of thermal infrared spectra acquired in limb viewing geometry by Cassini/CIRS in February 2010. We retrieve vertical profiles of Saturn's stratospheric temperature from 20 hPa to 10 (exp -2) hPa, at 9 latitudes between 20 deg N and 20 deg S. Using the gradient thermal wind equation, we derive a map of the zonal wind field. Both the temperature and the zonal wind vertical profiles exhibit an oscillation in the equatorial region. These results are compared to the temperature and zonal wind maps obtained from 2005-2006 CIRS limb data, when this oscillation was first reported. In both epochs, strong temperature anomalies at the equator (up to 20K) are consistent with adiabatic heating (cooling) due to a sinking (rising) motion at a speed of 0.1 - 0.2 mm/s. Finally, we show that the altitude of the maximum eastward wind has moved downwards by 1.3 scale heights in 4.2 years, hence with a 'phase' speed of approximately 0.5 mm/s. This rate is consistent with the estimated period of 14.7 years for the equatorial oscillation, and requires a local zonal acceleration of 1.1 x 10(exp -6) m.s(exp -2) at the 2.5 hPa pressure level. This downward propagation of the oscillation is consistent with it being driven by absorption of upwardly propagating waves.

Variability in daily, zonal mean lower-stratospheric temperatures

NASA Technical Reports Server (NTRS)

Christy, John R.; Drouilhet, S. James, Jr.

1994-01-01

Satellite data from the microwave sounding unit (MSU) channel 4, when carefully merged, provide daily zonal anomalies of lower-stratosphere temperature with a level of precision between 0.01 and 0.08 C per 2.5 deg latitude band. Global averages of these daily zonal anomalies reveal the prominent warming events due to volcanic aerosol in 1982 (El Chichon) and 1991 (Mt. Pinatubo), which are on the order of 1 C. The quasibiennial oscillation (QBO) may be extracted from these zonal data by applying a spatial filter between 15 deg N and 15 deg S latitude, which resembles the meridional curvature. Previously published relationships between the QBO and the north polar stratospheric temperatures during northern winter are examined but were not found to be reproduced in the MSU4 data. Sudden stratospheric warmings in the north polar region are represented in the MSU4 data for latitudes poleward of 70 deg N. In the Southern Hemisphere, there appears to be a moderate relationship between total ozone concentration and MSU4 temperatures, though it has been less apparent in 1991 and 1992. In terms of empirical modes of variability, the authors find a strong tendency in EOF 1 (39.2% of the variance) for anomalies in the Northern Hemisphere polar regions to be counterbalanced by anomalies equatorward of 40 deg N and 40 deg S latitudes. In addition, most of the modes revealed significant power in the 15-20 day period band.

Why do modelled and observed surface wind stress climatologies differ in the trade wind regions?

NASA Astrophysics Data System (ADS)

Simpson, I.; Bacmeister, J. T.; Sandu, I.; Rodwell, M. J.

2017-12-01

Global climate models (GCMs) exhibit stronger easterly zonal surface wind stress and near surface winds in the Northern Hemisphere (NH) trade winds than observationally constrained reanalyses or other observational products. A comparison, between models and reanalyses, of the processes that contribute to the zonal mean, vertically integrated balance of momentum, reveals that this wind stress discrepancy cannot be explained by either the resolved dynamics or parameterized tendencies that are common to each. Rather, a substantial residual exists in the momentum balance of the reanalyses, pointing toward a role for the analysis increments. Indeed, they are found to systematically weaken the NH near surface easterlies in winter, thereby reducing the surface wind stress. Similar effects are found in the Southern Hemisphere and further analysis of the spatial structure and seasonality of these increments, demonstrates that they act to weaken the near surface flow over much of the low latitude oceans in both summer and winter. This suggests an erroneous /missing process in GCMs that constitutes a missing drag on the low level zonal flow over oceans. Either this indicates a mis-representation of the drag between the surface and the atmosphere, or a missing internal atmospheric process that amounts to an additional drag on the low level zonal flow. If the former is true, then observation based surface stress products, which rely on similar drag formulations to GCMs, may be underestimating the strength of the easterly surface wind stress.

Nonstationary Gravity Wave Forcing of the Stratospheric Zonal Mean Wind

NASA Technical Reports Server (NTRS)

Alexander, M. J.; Rosenlof, K. H.

1996-01-01

The role of gravity wave forcing in the zonal mean circulation of the stratosphere is discussed. Starting from some very simple assumptions about the momentum flux spectrum of nonstationary (non-zero phase speed) waves at forcing levels in the troposphere, a linear model is used to calculate wave propagation through climatological zonal mean winds at solstice seasons. As the wave amplitudes exceed their stable limits, a saturation criterion is imposed to account for nonlinear wave breakdown effects, and the resulting vertical gradient in the wave momentum flux is then used to estimate the mean flow forcing per unit mass. Evidence from global, assimilated data sets are used to constrain these forcing estimates. The results suggest the gravity-wave-driven force is accelerative (has the same sign as the mean wind) throughout most of the stratosphere above 20 km. The sense of the gravity wave forcing in the stratosphere is thus opposite to that in the mesosphere, where gravity wave drag is widely believed to play a principal role in decelerating the mesospheric jets. The forcing estimates are further compared to existing gravity wave parameterizations for the same climatological zonal mean conditions. Substantial disagreement is evident in the stratosphere, and we discuss the reasons for the disagreement. The results suggest limits on typical gravity wave amplitudes near source levels in the troposphere at solstice seasons. The gravity wave forcing in the stratosphere appears to have a substantial effect on lower stratospheric temperatures during southern hemisphere summer and thus may be relevant to climate.

Wave kinetics of drift-wave turbulence and zonal flows beyond the ray approximation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhu, Hongxuan; Zhou, Yao; Ruiz, D. E.

Inhomogeneous drift-wave turbulence can be modeled as an effective plasma where drift waves act as quantumlike particles and the zonal-flow velocity serves as a collective field through which they interact. This effective plasma can be described by a Wigner-Moyal equation (WME), which generalizes the quasilinear wave-kinetic equation (WKE) to the full-wave regime, i.e., resolves the wavelength scale. Unlike waves governed by manifestly quantumlike equations, whose WMEs can be borrowed from quantum mechanics and are commonly known, drift waves have Hamiltonians very different from those of conventional quantum particles. This causes unusual phase-space dynamics that is typically not captured by themore » WKE. We demonstrate how to correctly model this dynamics with the WME instead. Specifically, we report full-wave phase-space simulations of the zonal-flow formation (zonostrophic instability), deterioration (tertiary instability), and the so-called predator-prey oscillations. We also show how the WME facilitates analysis of these phenomena, namely, (i) we show that full-wave effects critically affect the zonostrophic instability, particularly its nonlinear stage and saturation; (ii) we derive the tertiary-instability growth rate; and (iii) we demonstrate that, with full-wave effects retained, the predator-prey oscillations do not require zonal-flow collisional damping, contrary to previous studies. In conclusion, we also show how the famous Rayleigh-Kuo criterion, which has been missing in wave-kinetic theories of drift-wave turbulence, emerges from the WME.« less

Mapping potential vorticity dynamics on saturn: Zonal mean circulation from Cassini and Voyager data

NASA Astrophysics Data System (ADS)

Read, P. L.; Conrath, B. J.; Fletcher, L. N.; Gierasch, P. J.; Simon-Miller, A. A.; Zuchowski, L. C.

2009-12-01

Maps of Ertel potential vorticity on isentropic surfaces (IPV) and quasi-geostrophic potential vorticity (QGPV) are well established in dynamical meteorology as powerful sources of insight into dynamical processes involving 'balanced' flow (i.e. geostrophic or similar). Here we derive maps of zonal mean IPV and QGPV in Saturn's upper troposphere and lower stratosphere by making use of a combination of velocity measurements, derived from the combined tracking of cloud features in images from the Voyager and Cassini missions, and thermal measurements from the Cassini Composite Infrared Spectrometer (CIRS) instrument. IPV and QGPV are mapped and compared for the entire globe between latitudes 89∘S-82∘N. As on Jupiter, profiles of zonally averaged PV show evidence for a step-like "stair-case" pattern suggestive of local PV homogenisation, separated by strong PV gradients in association with eastward jets. The northward gradient of PV (IPV or QGPV) is found to change sign in several places in each hemisphere, however, even when baroclinic contributions are taken into account. The stability criterion with respect to Arnol'd's second stability theorem may be violated near the peaks of westward jets. Visible, near-IR and thermal-IR Cassini observations have shown that these regions exhibit many prominent, large-scale eddies and waves, e.g. including 'storm alley'. This suggests the possibility that at least some of these features originate from instabilities of the background zonal flow.

Seasonal Correlations of SST, Water Vapor, and Convective Activity in Tropical Oceans: A New Hyperspectral Data Set for Climate Model Testing

NASA Technical Reports Server (NTRS)

Aumann, Hartmut H.; Gregorich, David T.; Broberg, Steven E.; Elliott, Denis A.

2007-01-01

The analysis of the response of the Earth Climate System to the seasonal changes of solar forcing in the tropical oceans using four years of the Atmospheric Infrared Sounder (AIRS) and Advanced Microwave Sounding Unit (AMSU) data between 2002 and 2006 gives new insight into amplitude and phase relationships between surface and tropospheric temperatures, humidity, and convective activity. The intensity of the convective activity is measured by counting deep convective clouds. The peaks of convective activity, temperature in the mid-troposphere, and water vapor in the 0 - 30 N and 0 - 30 S tropical ocean zonal means occur about two months after solstice, all leading the peak of the sea surface temperature by several weeks. Phase is key to the evaluation of feedback. The evaluation of climate models in terms of zonal and annual means and annual mean deviations from zonal means can now be supplemented by evaluating the phase of key atmospheric and surface parameters relative to solstice. The ability of climate models to reproduce the statistical flavor of the observed amplitudes and relative phases for broad zonal means should lead to increased confidence in the realism of their water vapor and cloud feedback algorithms. AIRS and AMSU were launched into a 705 km altitude polar sun-synchronous orbit on the EOS Aqua spacecraft on May 4, 2002, and have been in routine data gathering mode since September 2002.

Seasonal Correlations of SST, Water Vapor, and Convective Activity in Tropical Oceans: A New Hyperspectral Data Set for Climate Model Testing

NASA Technical Reports Server (NTRS)

Aumann, Hartmut H.; Gregorich, David T.; Broberg, Steven E.; Elliott, Denis A.

2007-01-01

The analysis of the response of the Earth Climate System to the seasonal changes of solar forcing in the tropical oceans using four years of the Atmospheric Infrared Sounder (AIRS) and Advanced Microwave Sounding Unit (AMSU) data between 2002 and 2006 gives new insight into amplitude and phase relationships between surface and tropospheric temperatures, humidity, and convective activity. The intensity of the convective activity is measured by counting deep convective clouds. The peaks of convective activity, temperature in the mid-troposphere, and water vapor in the 0-30 N and 0-30 S tropical ocean zonal means occur about two months after solstice, all leading the peak of the sea surface temperature by several weeks. Phase is key to the evaluation of feedback. The evaluation of climate models in terms of zonal and annual means and annual mean deviations from zonal means can now be supplemented by evaluating the phase of key atmospheric and surface parameters relative to solstice. The ability of climate models to reproduce the statistical flavor of the observed amplitudes and relative phases for broad zonal means should lead to increased confidence in the realism of their water vapor and cloud feedback algorithms. AIRS and AMSU were launched into a 705 km altitude polar sun-synchronous orbit on the EOS Aqua spacecraft on May 4, 2002, and have been in routine data gathering mode since September 2002.

Convectively driven decadal zonal accelerations in Earth's fluid core

NASA Astrophysics Data System (ADS)

More, Colin; Dumberry, Mathieu

2018-04-01

Azimuthal accelerations of cylindrical surfaces co-axial with the rotation axis have been inferred to exist in Earth's fluid core on the basis of magnetic field observations and changes in the length-of-day. These accelerations have a typical timescale of decades. However, the physical mechanism causing the accelerations is not well understood. Scaling arguments suggest that the leading order torque averaged over cylindrical surfaces should arise from the Lorentz force. Decadal fluctuations in the magnetic field inside the core, driven by convective flows, could then force decadal changes in the Lorentz torque and generate zonal accelerations. We test this hypothesis by constructing a quasi-geostrophic model of magnetoconvection, with thermally driven flows perturbing a steady, imposed background magnetic field. We show that when the Alfvén number in our model is similar to that in Earth's fluid core, temporal fluctuations in the torque balance are dominated by the Lorentz torque, with the latter generating mean zonal accelerations. Our model reproduces both fast, free Alfvén waves and slow, forced accelerations, with ratios of relative strength and relative timescale similar to those inferred for the Earth's core. The temporal changes in the magnetic field which drive the time-varying Lorentz torque are produced by the underlying convective flows, shearing and advecting the magnetic field on a timescale associated with convective eddies. Our results support the hypothesis that temporal changes in the magnetic field deep inside Earth's fluid core drive the observed decadal zonal accelerations of cylindrical surfaces through the Lorentz torque.

Modeling Study of Mesospheric Planetary Waves: Genesis and Characteristics

NASA Technical Reports Server (NTRS)

Mayr, H. G.; Mengel, J. G.; Talaat, E. L.; Porter, H. S.; Chan, K. L.

2003-01-01

In preparation for the measurements from the TIMED mission and coordinated ground based observations, we discuss results for the planetary waves (PWs) that appear in our Numerical Spectral Model (NSM). The present model accounts for a tropospheric heat source in the zonal mean (m = 0), which reproduces qualitatively the observed zonal jets near the tropopause and the accompanying reversal in the latitudinal temperature variations. We discuss the PWs that are solely generated internally, i.e., without the explicit excitation sources related to tropospheric convection or topography. Our analysis shows that PWs are not produced when the zonally averaged heat source into the atmosphere is artificially suppressed, and that the PWs generally are significantly weaker when the tropospheric source is not applied. Instabilities associated with the zonal mean temperature, pressure and wind fields, which still need to be explored, are exciting PWs that have amplitudes in the mesosphere comparable to those observed. Three classes of PWs are generated in the NSM. (1) Rossby waves, (2) Rossby gravity waves propagating westward at low latitudes, and (3) Eastward propagating equatorial Kelvin waves. A survey of the PWs reveals that the largest wind amplitudes tend to occur below 80 km in the winter hemisphere, but above that altitude they occur in the summer hemisphere where the amplitudes can approach 50 meters per second. It is shown that the non-migrating tides in the mesosphere, generated by non-linear coupling between migrating tides and PWs, are significantly larger for the model with the tropospheric heat source.

An alternative to the TEM (Transformed Eulerian Mean) equations

NASA Astrophysics Data System (ADS)

Gaßmann, Almut

2013-04-01

The TEM equations constitute a powerful means to get access to the residual circulation. However, due to their foundation on the wave perspective, they deliver only a zonally averaged picture without access to the three-dimensional structure or the local origins of the residual circulation. Therefore it is worth to investigate whether there are alternatives. The pathway followed here is to perform a transformation of the momentum and the potential temperature equation before taking the zonal mean. This is done by removing the steady state ideal wind solution vid = ?×?B-(?±P) from the equations (? - potential temperature, B - Bernoulli function, P - Ertel's potential vorticity EPV, ?± - density). The advantage of that approach is that the total EPV-flux does no longer contain an explicitly visible 'do-nothing-flux'. This flux, ?? ×?B, does only vanish when averaging on isentropic surfaces, but not on other isosurfaces. Here we find the reason why the conventional zonal mean on isentropes delivers a direct overturning cell on each hemisphere, whereas on other isosurfaces we obtain the typical three-cell structure with Headley, Ferrel, and polar cells. It will be demonstrated and made visible through idealized climate experiments with the ICON-IAP model that the zonal averages of the nonideal wind components vnid = v - vid and wnid = w - wid constitute similar direct overturning cells on non-isentropic surfaces as obtained with the TEM-generated v* and w*. It is also interesting to inspect fields of local nonideal wind components, the very origin of the residual circulation.

Seasonal variation of the stratospheric circulation

NASA Technical Reports Server (NTRS)

Hirota, I.; Shiotani, M.

1985-01-01

An extensive analysis is made of the extratropical stratospheric circulation in terms of the seasonal variation of large-scale motion fields, with the aid of height and temperature data obtained from the TIROS satellite. Special attention is paid to a comparison of climatological aspects between the Northern Hemisphere (NH) and the Southern Hemisphere (SH). In order to see the general picture of the annual mach of the upper stratosphere, the zonal mean values of geopotential height of the 1 mb level at 70 deg N and 70 deg S were plotted on the daily basis throughout a year. It is observed that, during the winter, the zonal mean 1 mb height in the NH is much more variable than that in the SH. It is also notable that the SH height is rather oscillatory throughout the longer period from midwinter to early summer. Since the zonal mean height in the polar latitude is a rough measure of the mean zonal flow in extratropical latitudes, the difference of the seasonal variation between the two hemispheres mentioned above is considered to be due mainly to the planetary wave-mean flow interaction in the middle atmosphere. The wave activity in the middle atmosphere is represented more rigorously by the Eliassen-Palm flux associated with vertically propagating planetary waves forced from below. The day-to-day variation of the EP flux in the upper stratosphere shows that the wave activity varies intermittently with a characteristic time scale of about two weeks.

Laboratory study of forced rotating shallow water turbulence

NASA Astrophysics Data System (ADS)

Espa, Stefania; Di Nitto, Gabriella; Cenedese, Antonio

2011-12-01

During the last three decades several authors have studied the appearance of multiple zonal jets in planetary atmospheres and in the Earths oceans. The appearance of zonal jets has been recovered in numerical simulations (Yoden & Yamada, 1993), laboratory experiments (Afanasyev & Wells, 2005; Espa et al., 2008, 2010) and in field measurements of the atmosphere of giant planets (Galperin et al., 2001). Recent studies have revealed the presence of zonation also in the Earths oceans, in fact zonal jets have been found in the outputs of Oceanic General Circulation Models-GCMs (Nakano & Hasumi, 2005) and from the analysis of satellite altimetry observations (Maximenko et al., 2005). In previous works (Espa et al., 2008, 2010) we have investigated the impact of the variation of the rotation rate and of the fluid depth on jets organization in decaying and forced regimes. In this work we show results from experiments performed in a bigger domain in which the fluid is forced continuously. The experimental set-up consists of a rotating tank (1m in diameter) where the initial distribution of vorticity has been generated via the Lorentz force in an electromagnetic cell. The latitudinal variation of the Coriolis parameter has been simulated by the parabolic profile assumed by the free surface of the rotating fluid. Flow measurements have been performed using an image analysis technique. Experiments have been performed changing the tank rotation rate and the fluid thickness. We have investigated the flow in terms of zonal and radial flow pattern, flow variability and jet scales.

Understanding the double peaked El Niño in coupled GCMs

NASA Astrophysics Data System (ADS)

Graham, Felicity S.; Wittenberg, Andrew T.; Brown, Jaclyn N.; Marsland, Simon J.; Holbrook, Neil J.

2017-03-01

Coupled general circulation models (CGCMs) simulate a diverse range of El Niño-Southern Oscillation behaviors. "Double peaked" El Niño events—where two separate centers of positive sea surface temperature (SST) anomalies evolve concurrently in the eastern and western equatorial Pacific—have been evidenced in Coupled Model Intercomparison Project version 5 CGCMs and are without precedent in observations. The characteristic CGCM double peaked El Niño may be mistaken for a central Pacific warming event in El Niño composites, shifted westwards due to the cold tongue bias. In results from the Australian Community Climate and Earth System Simulator coupled model, we find that the western Pacific warm peak of the double peaked El Niño event emerges due to an excessive westward extension of the climatological cold tongue, displacing the region of strong zonal SST gradients towards the west Pacific. A coincident westward shift in the zonal current anomalies reinforces the western peak in SST anomalies, leading to a zonal separation between the warming effect of zonal advection (in the west Pacific) and that of vertical advection (in the east Pacific). Meridional advection and net surface heat fluxes further drive growth of the western Pacific warm peak. Our results demonstrate that understanding historical CGCM El Niño behaviors is a necessary precursor to interpreting projections of future CGCM El Niño behaviors, such as changes in the frequency of eastern Pacific El Niño events, under global warming scenarios.

Wave kinetics of drift-wave turbulence and zonal flows beyond the ray approximation

DOE PAGES

Zhu, Hongxuan; Zhou, Yao; Ruiz, D. E.; ...

2018-05-29

Inhomogeneous drift-wave turbulence can be modeled as an effective plasma where drift waves act as quantumlike particles and the zonal-flow velocity serves as a collective field through which they interact. This effective plasma can be described by a Wigner-Moyal equation (WME), which generalizes the quasilinear wave-kinetic equation (WKE) to the full-wave regime, i.e., resolves the wavelength scale. Unlike waves governed by manifestly quantumlike equations, whose WMEs can be borrowed from quantum mechanics and are commonly known, drift waves have Hamiltonians very different from those of conventional quantum particles. This causes unusual phase-space dynamics that is typically not captured by themore » WKE. We demonstrate how to correctly model this dynamics with the WME instead. Specifically, we report full-wave phase-space simulations of the zonal-flow formation (zonostrophic instability), deterioration (tertiary instability), and the so-called predator-prey oscillations. We also show how the WME facilitates analysis of these phenomena, namely, (i) we show that full-wave effects critically affect the zonostrophic instability, particularly its nonlinear stage and saturation; (ii) we derive the tertiary-instability growth rate; and (iii) we demonstrate that, with full-wave effects retained, the predator-prey oscillations do not require zonal-flow collisional damping, contrary to previous studies. In conclusion, we also show how the famous Rayleigh-Kuo criterion, which has been missing in wave-kinetic theories of drift-wave turbulence, emerges from the WME.« less

Geographic distribution of zonal wind and UV albedo at cloud top level from VMC camera on Venus Express: Influence of Venus topography through stationary gravity waves vertical propagation.

NASA Astrophysics Data System (ADS)

Bertaux, Jean-Loup; Khatunstsev, Igor; Hauchecorne, Alain; Markiewicz, Wojciech; Marcq, Emmanuel; Lebonnois, Sébastien; Patsaeva, Marina; Turin, Alexander

2015-04-01

UV images (at 365 nm) of Venus cloud top collected with VMC camera on board Venus Express allowed to derive a large number of wind measurements at altitude 67±2 km from tracking of cloud features in the period 2006-2012. Both manual (45,600) and digital (391,600) individual wind measurements over 127 orbits were analyzed showing various patterns with latitude and local time. A new longitude-latitude geographic map of the zonal wind shows a conspicuous region of strongly decreased zonal wind, a remarkable feature that was unknown up to now. While the average zonal wind near equator (from 5°S to 15°s) is -100.9 m/s in the longitude range 200-330°, it reaches -83.4 m/s in the range 60-100°, a difference of 17.5 m/s. When compared to the altimetry map of Venus, it is found that the zonal wind pattern is well correlated with the underlying relief in the region of Aphrodite Terra, with a downstream shift of about 30° (˜3,200 km). We interpret this pattern as the result of stationary gravity waves produced at ground level by the up lift of air when the horizontal wind encounters a mountain slope. These waves can propagate up to cloud top level, break there and transfer their momentum to the zonal flow. A similar phenomenon is known to operate on Earth with an influence on mesospheric winds. The LMD-GCM for Venus was run with or without topography, with and without a parameterization of gravity waves and does not display such an observed change of velocity near equator. The cloud albedo map at 365 nm varies also in longitude and latitude. We speculate that it might be the result of increased vertical mixing associated to wave breaking, and decreased abundance of the UV absorber which makes the contrast in images. The impact of these new findings on current super rotation theories remains to be assessed. This work was triggered by the presence of a conspicuous peak at 117 days in a time series of wind measurements. This is the length of the solar day as seen at the ground of Venus. Since VMC measurements are done preferably in a local time window centred on the sub-solar point, any parameter having a geographic longitude dependence will show a peak at 117 days.

CALL FOR PAPERS: Special cluster issue on `Experimental studies of zonal flow and turbulence'

NASA Astrophysics Data System (ADS)

Itoh, S.-I.

2005-07-01

Plasma Physics and Controlled Fusion (PPCF) invites submissions on the topic of `Experimental studies of zonal flow and turbulence', for consideration for a special topical cluster of articles to be published early in 2006. The topical cluster will be published in an issue of PPCF, combined with regular articles. The Guest Editor for the special cluster will be S-I Itoh, Kyushu University, Japan. There has been remarkable progress in the area of structure formation by turbulence. One of the highlights has been the physics of zonal flow and drift wave turbulence in toroidal plasmas. Extensive theoretical as well as computational studies have revealed the various mechanisms in turbulence and zonal flows. At the same time, experimental research on the zonal flow, geodesic acoustic modes and generation of global electric field by turbulence has evolved rapidly. Fast growth in reports of experimental results has stimulated further efforts to develop increased knowledge and systematic understanding. Each paper considered for the special cluster should describe the present research status and new scientific knowledge/results from the authors on experimental studies of zonal flow, geodesic acoustic modes and generation of electric field by turbulence (including studies of Reynolds-Maxwell stresses, etc). Manuscripts submitted to this special cluster in Plasma Physics and Controlled Fusion will be refereed according to the normal criteria and procedures of the journal. The Guest Editor guides the progress of the cluster from the initial open call, through the standard refereeing process, to publication. To be considered for inclusion in the special cluster, articles must be submitted by 2 September 2005 and must clearly state `for inclusion in the Turbulent Plasma Cluster'. Articles submitted after this deadline may not be included in the cluster issue but may be published in a later issue of the journal. Please submit your manuscript electronically via our web site at www.iop.org/journals/ppcf or by e-mail to mailto:ppcf@iop.org. Electronic submissions are encouraged but if you wish to submit a hard copy of your article then please send your typescript, a set of original figures and a covering letter to: The Publishing Administrator Plasma Physics and Controlled Fusion Institute of Physics Publishing Dirac House Temple Back Bristol BS1 6BE UK Further information on how to submit may be obtained on request by e-mailing the journal at the above address. Alternatively, visit the homepage of the journal (www.iop.org/journals/ppcf).

Asteroid Lightcurve Analysis at the Oakley Southern Sky Observatory: 2009 October thru 2010 April

NASA Astrophysics Data System (ADS)

Albers, Kenda; Kragh, Katherine; Monnier, Adam; Pligge, Zachary; Stolze, Kellen; West, Josh; Yim, Arnold; Ditteon, Richard

2010-10-01

Photometric data for 44 asteroids were collected over 54 nights of observing during 2009 October thru 2010 April at the Oakley Southern Sky Observatory. The asteroids were: 826 Henrika, 918 Itha, 983 Gunila, 1049 Gotho, 1167 Dubiago, 1181 Lilith, 1227 Geranium, 1604 Tombaugh, 1636 Porter, 1826 Miller, 1977 Shura, 2004 Lexell, 2196 Ellicott, 2303 Retsina, 2307 Garuda, 2601 Bologna, 2609 Kiril-Metodi, 2851 Harbin, 2881 Meiden, 3118 Claytonsmith, 3324 Avsyuk, 3640 Gostin, 4207 Chernova, 4536 Drewpinsky, 4838 Billmclaughlin, 5235 Jean-Loup, 5274 Degewij, 5240 Kwasan, (6019) 1991 RO6, 6091 Mitsuru, 6961 Ashitaka, (7111) 1985 QA1, (8228) 1996 YB2, 11017 Billputnam, (13023) 1988 XT1, (14741) 2000 EQ49, 15938 Bohnenblust, 16463 Nayoro, (17633) 1996 JU, (21023) 1989 DK, 21558 Alisonliu, (21594) 1998 VP31, (34459) 2000 SC91, and (189099) 2001 RO.

A simple inertial model for Neptune's zonal circulation

NASA Technical Reports Server (NTRS)

Allison, Michael; Lumetta, James T.

1990-01-01

Voyager imaging observations of zonal cloud-tracked winds on Neptune revealed a strongly subrotational equatorial jet with a speed approaching 500 m/s and generally decreasing retrograde motion toward the poles. The wind data are interpreted with a speculative but revealingly simple model based on steady gradient flow balance and an assumed global homogenization of potential vorticity for shallow layer motion. The prescribed model flow profile relates the equatorial velocity to the mid-latitude shear, in reasonable agreement with the available data, and implies a global horizontal deformation scale L(D) of about 3000 km.

Variability of quasi-stationary planetary waves

NASA Technical Reports Server (NTRS)

Krivolutsky, A. A.; Petushkov, N. D.; Tarasenko, D. A.

1989-01-01

The results of the analysis of nonzonal perturbations (m = 1, 2, 3) of the geopotential field at a 30 mb level are presented. A long period modulation of the harmonics' amplitude is discovered. Calculations of eigenfunctions and eigennumbers of the Laplace tidal equation are carried out for a real latitudinal wind profile. The observed first zonal harmonic in different years is caused by the same mode. Thus, the difference in the wave amplitudes could not be accounted for by the difference in stratospheric zonal circulation in different years and should be related to tropospheric processes.

Large Scale Winter Time Disturbances in Meteor Winds over Central and Eastern Europe

NASA Technical Reports Server (NTRS)

Greisiger, K. M.; Portnyagin, Y. I.; Lysenko, I. A.

1984-01-01

Daily zonal wind data of the four pre-MAP-winters 1978/79 to 1981/82 obtained over Central Europe and Eastern Europe by the radar meteor method were studied. Available temperature and satellite radiance data of the middle and upper stratosphere were used for comparison, as well as wind data from Canada. The existence or nonexistence of coupling between the observed large scale zonal wind disturbances in the upper mesopause region (90 to 100 km) and corresponding events in the stratosphere are discussed.

Seasonal air and water mass redistribution effects on LAGEOS and Starlette

NASA Technical Reports Server (NTRS)

Gutierrez, Roberto; Wilson, Clark R.

1987-01-01

Zonal geopotential coefficients have been computed from average seasonal variations in global air and water mass distribution. These coefficients are used to predict the seasonal variations of LAGEOS' and Starlette's orbital node, the node residual, and the seasonal variation in the 3rd degree zonal coefficient for Starlette. A comparison of these predictions with the observed values indicates that air pressure and, to a lesser extent, water storage may be responsible for a large portion of the currently unmodeled variation in the earth's gravity field.

Expansion of the gravitational potential with computerized Poisson series

NASA Technical Reports Server (NTRS)

Broucke, R.

1976-01-01

The paper describes a recursive formulation for the expansion of the gravitational potential valid for both the tesseral and zonal harmonics. The expansion is primarily in rectangular coordinates, but the classical orbit elements or equinoctial orbit elements can be easily substituted. The equations of motion for the zonal harmonics in both classical and equinoctial orbital elements are described in a form which will result in closed-form expressions for the first-order perturbations. In order to achieve this result, the true longitude or true anomaly have to be used as independent variables.

Turbulent Convection in an Anelastic Rotating Sphere: A Model for the Circulation on the Giant Planets

DTIC Science & Technology

2008-06-01

exterior weather layer, using a quasigeostrophic two layer channel model on a beta plane , where the colum- nar interior is therefore represented by a...116 5.4 The evolution of the ’it’ field in the weakly nonlinear run ........ .. 117 5.5 The zonal mean zonal velocity on the equatorial plane in...turbulence on a 8 plane . These two approaches have been in debate ever since. 1.3.1 Shallow Models The first to apply the "shallow" approach to

Approximate Co-Location of Precipitation and Low-Level Westerlies in Tropical Monthly Means

NASA Technical Reports Server (NTRS)

Choa, Winston C.; Chen, Baode

1999-01-01

In summer monsoon regions the monthly mean precipitation regions coincide approximately well with regions of westerlies at low-levels. An included chart shows a 15-year (1979-1993) mean August 850 hPa zonal wind from NCEP/NCAR reanalysis dataset and Xie-Arkin precipitation. It shows a region of westerlies covering most of Northern Indian Ocean and extending to northwestern Pacific. This region coincides well with the region with precipitation greater than 6 mm/day. Obviously the coincidence is not exact; the region of larges; zonal wind in the Arabian Sea is in a region of relatively low precipitation and is far from the region of maximum precipitation in Bay of Bengal. Also, in a zonally averaged sense between 40E and 140E, the latitude of maximum precipitation is slightly higher than that of the maximum zonal wind. Low-level westerlies are also found in regions west of Central America and in western Africa north of the equator. These regions are also closely associated with precipitation centers. Across equator from these westerlies regions there are regions of strong easterlies. Also, on their poleward side the westerly regions are flanked by weaker easterly regions. In February, similar observation can be found in the Australian monsoon area and in South America monsoon region; again the regions of westerlies coincide well with regions of maximum precipitation. As in the northern hemisphere, the maximum precipitation is found to the cast of the maximum zonal wind. The two maxima lie almost at the same latitude with that of the westerlies slightly closer to the equator. In the non-monsoon seasons the low- level westerlies can also be found in the tropical precipitation regions, the longitudinal range of the westerlies is undiminished and the speed of the westerlies is not much weaker than that found in February. The interpretation of these observational facts is the goal of this investigation. The approach taken is numerical simulation with the Goddard Earth Observation Systems atmospheric general circulation model, and its aqua-planet version, combined with theoretical arguments.

Constraints on Saturn's Tropospheric General Circulation from Cassini ISS Images

NASA Technical Reports Server (NTRS)

DelGenio, Anthony D.; Barbara, John M.

2013-01-01

An automated cloud tracking algorithm is applied to Cassini Imaging Science Subsystem high-resolution apoapsis images of Saturn from 2005 and 2007 and moderate resolution images from 2011 and 2012 to define the near-global distribution of zonal winds and eddy momentum fluxes at the middle troposphere cloud level and in the upper troposphere haze. Improvements in the tracking algorithm combined with the greater feature contrast in the northern hemisphere during the approach to spring equinox allow for better rejection of erroneous wind vectors, a more objective assessment at any latitude of the quality of the mean zonal wind, and a population of winds comparable in size to that available for the much higher contrast atmosphere of Jupiter. Zonal winds at cloud level changed little between 2005 and 2007 at all latitudes sampled. Upper troposphere zonal winds derived from methane band images are approx. 10 m/s weaker than cloud level winds in the cores of eastward jets and approx. 5 m/s stronger on either side of the jet core, i.e., eastward jets appear to broaden with increasing altitude. In westward jet regions winds are approximately the same at both altitudes. Lateral eddy momentum fluxes are directed into eastward jet cores, including the strong equatorial jet, and away from westward jet cores and weaken with increasing altitude on the flanks of the eastward jets, consistent with the upward broadening of these jets. The conversion rate of eddy to mean zonal kinetic energy at the visible cloud level is larger in eastward jet regions (5.2x10(exp -5) sq m/s) and smaller in westward jet regions (1.6x10(exp -5) sqm/s) than the global mean value (4.1x10(ep -5) sq m/s). Overall the results are consistent with theories that suggest that the jets and the overturning meridional circulation at cloud level on Saturn are maintained at least in part by eddies due to instabilities of the large-scale flow near and/or below the cloud level.

Mesospheric circulation at the cloud top level of Venus according to Venus Monitoring Camera images

NASA Astrophysics Data System (ADS)

Khatuntsev, Igor; Patsaeva, Marina; Ignatiev, Nikolay; Titov, Dmitri; Markiewicz, Wojciech; Turin, Alexander

We present results of wind speed measurements at the cloud top level of Venus derived from manual cloud tracking in the UV (365 nm) and IR (965 nm) channels of the Venus Monitoring Camera Experiment (VMC) [1] on board the Venus Express mission. Cloud details have a maximal contrast in the UV range. More then 90 orbits have been processed. 30000 manual vectors were obtained. The period of the observations covers more than 4 venusian year. Zonal wind speed demonstrates the local solar time dependence. Possible diurnal and semidiurnal components are observed [2]. According to averaged latitude profile of winds at level of the upper clouds: -The zonal speed is slightly increasing by absolute values from 90 on the equator to 105 m/s at latitudes —47 degrees; -The period of zonal rotation has the maximum at the equator (5 earth days). It has the minimum (3 days) at altitudes —50 degrees. After minimum periods are slightly increasing toward the South pole; -The meridional speed has a value 0 on the equator, and then it is linear increasing up to 10 m/s (by absolute value) at 50 degrees latitude. "-" denotes movement from the equator to the pole. -From 50 to 80 degrees the meridional speed is again decreasing by absolute value up to 0. IR (965+10 nm) day side images can be used for wind tracking. The obtained speed of the zonal wind in the low and middle latitudes are systematically less than the wind speed derived from the UV images. The average zonal speed obtained from IR day side images in the low and average latitudes is about 65-70 m/s. The given fact can be interpreted as observation of deeper layers of mesosphere in the IR range in comparison with UV. References [1] Markiewicz W. J. et al. (2007) Planet. Space Set V55(12). P.1701-1711. [2] Moissl R., et al. (2008) J. Geophys. Res. 2008. doi:10.1029/2008JE003117. V.113.

The stratospheric quasi-biennial oscillation in the NCEP reanalyses: Climatological structures

NASA Astrophysics Data System (ADS)

Huesmann, Amihan S.; Hitchman, Matthew H.

2001-06-01

Global quasi-biennial variation in the lower stratosphere and tropopause region is studied using 41 years (1958-1998) of reanalyses from the National Centers for Environmental Prediction (NCEP). Horizontal wind, temperature, geopotential height, tropopause temperature and pressure fields are used. A new quasi-biennial oscillation (QBO) indexing method is presented, which is based on the zonal mean zonal wind shear anomaly at the equator and is compared to the Singapore index. A phase difference composting technique provides ``snapshots'' of the QBO meridional-vertical structure as it descends, and ``composite phases'' provide a look at its time progression. Via binning large amounts of data, the first observation-based estimate of the QBO meridional circulation is obtained. High-latitude QBO variability supports previous studies that invoke planetary wave-mean flow interaction as an explanation. The meridional distribution of the range in QBO zonal wind is compared with the stratospheric annual cycle, with the annual cycle dominating poleward of ~12° latitude but still being significant in the deep tropics. The issues of temporal shear zone asymmetries and phase locking with the annual cycle are critically examined. Subtracting the time mean and annual cycle removes ~2/3 of the asymmetry in wind (and wind shear) zone descent rate. The NCEP data validate previous findings that both the easterly and westerly QBO anomalous wind regimes in the lower stratosphere change sign preferentially during northern summer. It is noteworthy that the NCEP QBO amplitude and the relationships among the reanalysed zonal wind, temperature, and meridional circulation undergo a substantial change around 1978.

Effects of Bulk Composition on the Atmospheric Dynamics on Close-in Exoplanets

NASA Astrophysics Data System (ADS)

Zhang, Xi; Showman, Adam P.

2017-02-01

Super Earths and mini Neptunes likely have a wide range of atmospheric compositions, ranging from low molecular mass atmospheres of H2 to higher molecular atmospheres of water, CO2, N2, or other species. Here we systematically investigate the effects of atmospheric bulk compositions on temperature and wind distributions for tidally locked sub-Jupiter-sized planets, using an idealized 3D general circulation model (GCM). The bulk composition effects are characterized in the framework of two independent variables: molecular weight and molar heat capacity. The effect of molecular weight dominates. As the molecular weight increases, the atmosphere tends to have a larger day-night temperature contrast, a smaller eastward phase shift in the thermal phase curve, and a smaller zonal wind speed. The width of the equatorial super-rotating jet also becomes narrower, and the “jet core” region, where the zonal-mean jet speed maximizes, moves to a greater pressure level. The zonal-mean zonal wind is more prone to exhibit a latitudinally alternating pattern in a higher molecular weight atmosphere. We also present analytical theories that quantitatively explain the above trends and shed light on the underlying dynamical mechanisms. Those trends might be used to indirectly determine the atmospheric compositions on tidally locked sub-Jupiter-sized planets. The effects of the molar heat capacity are generally small. But if the vertical temperature profile is close to adiabatic, molar heat capacity will play a significant role in controlling the transition from a divergent flow in the upper atmosphere to a jet-dominated flow in the lower atmosphere.

On the fast zonal transport of the STS-121 space shuttle exhaust plume in the lower thermosphere

NASA Astrophysics Data System (ADS)

Yue, Jia; Liu, Han-Li; Meier, R. R.; Chang, Loren; Gu, Sheng-Yang; Russell, James, III

2013-03-01

Meier et al. (2011) reported rapid eastward transport of the STS-121 space shuttle (launch: July 4, 2006) main engine plume in the lower thermosphere, observed in hydrogen Lyman α images by the GUVI instrument onboard the TIMED satellite. In order to study the mechanism of the rapid zonal transport, diagnostic tracer calculations are performed using winds from the Thermosphere Ionosphere Mesosphere Electrodynamics General Circulation Model (TIME-GCM) simulation of July, 2006. It is found that the strong eastward jet at heights of 100-110 km, where the exhaust plume was deposited, results in a persistent eastward tracer motion with an average velocity of 45 m/s. This is generally consistent with, though faster than, the prevailing eastward shuttle plume movement with daily mean velocity of 30 m/s deduced from the STS-121 GUVI observation. The quasi-two-day wave (QTDW) was not included in the numerical simulation because it was found not to be large. Its absence, however, might be partially responsible for insufficient meridional transport to move the tracers away from the fast jet in the simulation. The current study and our model results from Yue and Liu (2010) explain two very different shuttle plume transport scenarios (STS-121 and STS-107 (launch: January 16, 2003), respectively): we conclude that lower thermospheric dynamics is sufficient to account for both very fast zonal motion (zonal jet in the case of STS-121) and very fast meridional motion to polar regions (large QTDW in the case of STS-107).

Coupled nature of evening-time ionospheric electrodynamics

NASA Astrophysics Data System (ADS)

Joshi, L. M.; Tsai, L. C.

2018-04-01

The F region evening electrodynamics in the equatorial region is characterized by a pre-reversal enhancement (PRE) in the zonal eastward electric field. Although the theoretical mechanisms for PRE are known, its variability, particularly day-to-day variability is not fully resolved. PRE is a large scale phenomenon driven by the F region dynamo after the sunset hours. This paper investigates whether the variability of the E region conductivity (particularly the one associated with the sporadic E, Es) has any influence on the F region dynamo and hence on the PRE of zonal electric field. Interestingly, ionosonde observations have indicated a higher occurrence of the blanketing type Es (Esb) over the low latitude on days with highly suppressed PRE of zonal electric field in comparison with the days with significantly larger PRE. Observational evidences presented in this paper suggests that the formation of the Esb in the evening hours is a sovereign process, not always controlled by the sheared F region vertical electric field of equatorial origin, mapping along the magnetic field line on to the low latitude E region. Model computations of the PRE suppression based on the measured Es densities have further substantiated the observational findings presented in this paper. These results clearly indicate that the low latitude Es has the potential to suppress the PRE of zonal electric field and possibly can play a vital role in explaining the PRE variability, particularly the day-to-day variability. Results have been discussed in light of earlier reports on PRE mechanisms and E-F region coupling processes.

A new paradigm for predicting zonal-mean climate and climate change

NASA Astrophysics Data System (ADS)

Armour, K.; Roe, G.; Donohoe, A.; Siler, N.; Markle, B. R.; Liu, X.; Feldl, N.; Battisti, D. S.; Frierson, D. M.

2016-12-01

How will the pole-to-equator temperature gradient, or large-scale patterns of precipitation, change under global warming? Answering such questions typically involves numerical simulations with comprehensive general circulation models (GCMs) that represent the complexities of climate forcing, radiative feedbacks, and atmosphere and ocean dynamics. Yet, our understanding of these predictions hinges on our ability to explain them through the lens of simple models and physical theories. Here we present evidence that zonal-mean climate, and its changes, can be understood in terms of a moist energy balance model that represents atmospheric heat transport as a simple diffusion of latent and sensible heat (as a down-gradient transport of moist static energy, with a diffusivity coefficient that is nearly constant with latitude). We show that the theoretical underpinnings of this model derive from the principle of maximum entropy production; that its predictions are empirically supported by atmospheric reanalyses; and that it successfully predicts the behavior of a hierarchy of climate models - from a gray radiation aquaplanet moist GCM, to comprehensive GCMs participating in CMIP5. As an example of the power of this paradigm, we show that, given only patterns of local radiative feedbacks and climate forcing, the moist energy balance model accurately predicts the evolution of zonal-mean temperature and atmospheric heat transport as simulated by the CMIP5 ensemble. These results suggest that, despite all of its dynamical complexity, the atmosphere essentially responds to energy imbalances by simply diffusing latent and sensible heat down-gradient; this principle appears to explain zonal-mean climate and its changes under global warming.

Synthetic thermosphere winds based on CHAMP neutral and plasma density measurements

NASA Astrophysics Data System (ADS)

Gasperini, F.; Forbes, J. M.; Doornbos, E. N.; Bruinsma, S. L.

2016-04-01

Meridional winds in the thermosphere are key to understanding latitudinal coupling and thermosphere-ionosphere coupling, and yet global measurements of this wind component are scarce. In this work, neutral and electron densities measured by the Challenging Minisatellite Payload (CHAMP) satellite at solar low and geomagnetically quiet conditions are converted to pressure gradient and ion drag forces, which are then used to solve the horizontal momentum equation to estimate low latitude to midlatitude zonal and meridional "synthetic" winds. We validate the method by showing that neutral and electron densities output from National Center for Atmospheric Research (NCAR) Thermosphere Ionosphere Mesosphere Electrodynamics-General Circulation Model (TIME-GCM) can be used to derive solutions to the momentum equations that replicate reasonably well (over 85% of the variance) the winds self-consistently calculated within the TIME-GCM. CHAMP cross-track winds are found to share over 65% of the variance with the synthetic zonal winds, providing further reassurance that this wind product should provide credible results. Comparisons with the Horizontal Wind Model 14 (HWM14) show that the empirical model largely underestimates wind speeds and does not reproduce much of the observed variability. Additionally, in this work we reveal the longitude, latitude, local time, and seasonal variability in the winds; show evidence of ionosphere-thermosphere (IT) coupling, with enhanced postsunset eastward winds due to depleted ion drag; demonstrate superrotation speeds of ˜27 m/s at the equator; discuss vertical wave coupling due the diurnal eastward propagating tide with zonal wave number 3 and the semidiurnal eastward propagating tide with zonal wave number 2.

The climatology of low-latitude ionospheric densities and zonal drifts from IMAGE-FUV.

NASA Astrophysics Data System (ADS)

Immel, T. J.; Sagawa, E.; Frey, H. U.; Mende, S. B.; Patel, J.

2004-12-01

The IMAGE satellite was the first dedicated to magnetospheric imaging, but has also provided numerous images of the nightside ionosphere with its Far-Ultraviolet (FUV) spectrographic imager. Nightside emissions of O I at 135.6-nm originating away from the aurora are due to recombination of ionospheric O+, and vary in intensity with (O+)2. IMAGE-FUV, operating in a highly elliptical orbit with apogee at middle latitudes and >7 Re altitude, measures this emission globally with 100-km resolution. During each 14.5 hour orbit, IMAGE-FUV is able to monitor nightside ionospheric densities for up to 6-7 hours. Hundreds of low-latitude ionospheric bubbles, their development and drift speed, and a variety of other dynamical variations in brightness and morphology of the equatorial anomalies have been observed during this mission. Furthermore, the average global distribution of low-latitude ionospheric plasma densities can be determined in 3 days. Imaging data collected from February through June of 2002 are used to compile a dataset containing a variety of parameters (e.g., latitude and brightness of peak plasma density, zonal bubble drift speed) which can be drawn from for climatological studies. Recent results indicate that the average ground speed of low-latitude zonal plasma drifts vary with longitude by up to 50%, and that a periodic variation in ionospheric densities with longitude suggests the influence of a lower-thermospheric non-migrating tide with wave number = 4 on ionospheric densities. An excellent correlation between zonal drift speed and the magnetic storm index Dst is also found.

The link between eddy-driven jet variability and weather regimes in the North Atlantic-European sector

NASA Astrophysics Data System (ADS)

Madonna, E.; Li, C.; Grams, C. M.; Woollings, T.

2017-12-01

Understanding the variability of the North Atlantic eddy-driven jet is key to unravelling the dynamics, predictability and climate change response of extratropical weather in the region. This study aims to 1) reconcile two perspectives on wintertime variability in the North Atlantic-European sector and 2) clarify their link to atmospheric blocking. Two common views of wintertime variability in the North Atlantic are the zonal-mean framework comprising three preferred locations of the eddy-driven jet (southern, central, northern), and the weather regime framework comprising four classical North Atlantic-European regimes (Atlantic ridge AR, zonal ZO, European/Scandinavian blocking BL, Greenland anticyclone GA). We use a k-means clustering algorithm to characterize the two-dimensional variability of the eddy-driven jet stream, defined by the lower tropospheric zonal wind in the ERA-Interim reanalysis. The first three clusters capture the central jet and northern jet, along with a new mixed jet configuration; a fourth cluster is needed to recover the southern jet. The mixed cluster represents a split or strongly tilted jet, neither of which is well described in the zonal-mean framework, and has a persistence of about one week, similar to the other clusters. Connections between the preferred jet locations and weather regimes are corroborated - southern to GA, central to ZO, and northern to AR. In addition, the new mixed cluster is found to be linked to European/Scandinavian blocking, whose relation to the eddy-driven jet was previously unclear. The results highlight the necessity of bridging from weather to climate scales for a deeper understanding of atmospheric circulation variability.

Wind regime peculiarities in the lower thermosphere in the winter of 1983/84

NASA Technical Reports Server (NTRS)

Lysenko, I. A.; Makarov, N. A.; Portnyagin, Yu. I.; Petrov, B. I.; Greisiger, K. M.; Schminder, R.; Kurschner, D.

1987-01-01

Temporal variations of prevailing winds at 90 to 100 km obtained from measurements carried out in winter 1983 to 1984 at three sites in the USSR and two sites in East Germany are reported. These variations are compared with those of the thermal stratospheric regime. Measurements were carried out using the drifts D2 method (meteor wind radar) and the D1 method (ionospheric drifts). Temporal variations of zonal and meridional prevailing wind components for all the sites are given. Also presented are zonal wind data obtained using the partial reflection wind radar. Wind velocity values were obtained by averaging data recorded at between 105 and 91 km altitude. Wind velocity data averaged in such a way can be related to about the same height interval to which the data obtained by the meteor radar and ionospheric methods at other sites, i.e., the mean height of the meteor zone (about 95 km). The results presented show that there are significant fluctuations about the seasonal course of both zonal and meridional prevailing winds.

Zonal Drift Variations and Suppression of Ionospheric Scintillation During St. Patrick's Day Storm Observed by Pingtung SCINDA Station in Taiwan

NASA Astrophysics Data System (ADS)

Su, S. Y.; Nayak, C.; Tsai, L. C.; Caton, R. G.; Groves, K. M.

2016-12-01

Variations of zonal drift and ionospheric VHF scintillations observed by a SCINDA station in Southern Taiwan during the St. Patrick's day geomagnetic storm are studied. Although scintillations were observed for 6 consecutive days before the storm, they were absence during the storm period. Data from VHF receivers, ionosonde and in situ plasma density observations from ESA's SWARM constellation are used to study the ionospheric irregularity/scintillation events in the Taiwanese sector to compare with what happened in the Indian sectors. The absence of scintillation in the Taiwanese sector during the storm period seems to be caused by a reduced pre-reversal enhancement (PRE) electric field from a westward prompt-penetration electric field (PPEF) during the storm. A low post-sunset ionosphere thus becomes unfavorable for the Rayleigh-Taylor instability to occur. On the contrary, the PPEFs were found to strongly enhance the PRE electric field in the Indian sector to cause the ionospheric irregularities/scintillations in the post-sunset sector. Zonal drift variations during the storm time are also discussed in conjunction with the irregularity/scintillation occurrences.

Characteristics of equatorial plasma bubble zonal drift velocity and tilt based on Hong Kong GPS CORS network: From 2001 to 2012

NASA Astrophysics Data System (ADS)

Ji, Shengyue; Chen, Wu; Weng, Duojie; Wang, Zhenjie

2015-08-01

Hong Kong (22.3°N, 114.2°E, dip: 30.5°N; geomagnetic 15.7°N, 173.4°W, declination: 2.7°W) is a low-latitude area, and the Hong Kong Continuously Operating Reference Station (CORS) network has been developed and maintained by Lands Department of Hong Kong government since 2001. Based on the collected GPS observations of a whole solar cycle from 2001 to 2012, a method is proposed to estimate the zonal drift velocity as well as the tilt of the observed plasma bubbles, and the estimated results are statistically analyzed. It is found that although the plasma bubbles are basically vertical within the equatorial plane, the tilt can be as big as more than 60° eastward or westward sometimes. And, the tilt and the zonal drift velocity are correlated. When the velocity is large, the tilt is also large generally. Another finding is that large velocity and tilt generally occur in spring and autumn and in solar active years.

Global atmospheric circulation statistics: Four year averages

NASA Technical Reports Server (NTRS)

Wu, M. F.; Geller, M. A.; Nash, E. R.; Gelman, M. E.

1987-01-01

Four year averages of the monthly mean global structure of the general circulation of the atmosphere are presented in the form of latitude-altitude, time-altitude, and time-latitude cross sections. The numerical values are given in tables. Basic parameters utilized include daily global maps of temperature and geopotential height for 18 pressure levels between 1000 and 0.4 mb for the period December 1, 1978 through November 30, 1982 supplied by NOAA/NMC. Geopotential heights and geostrophic winds are constructed using hydrostatic and geostrophic formulae. Meridional and vertical velocities are calculated using thermodynamic and continuity equations. Fields presented in this report are zonally averaged temperature, zonal, meridional, and vertical winds, and amplitude of the planetary waves in geopotential height with zonal wave numbers 1-3. The northward fluxes of sensible heat and eastward momentum by the standing and transient eddies along with their wavenumber decomposition and Eliassen-Palm flux propagation vectors and divergences by the standing and transient eddies along with their wavenumber decomposition are also given. Large interhemispheric differences and year-to-year variations are found to originate in the changes in the planetary wave activity.

Numerical aspects and implementation of a two-layer zonal wall model for LES of compressible turbulent flows on unstructured meshes

NASA Astrophysics Data System (ADS)

Park, George Ilhwan; Moin, Parviz

2016-01-01

This paper focuses on numerical and practical aspects associated with a parallel implementation of a two-layer zonal wall model for large-eddy simulation (LES) of compressible wall-bounded turbulent flows on unstructured meshes. A zonal wall model based on the solution of unsteady three-dimensional Reynolds-averaged Navier-Stokes (RANS) equations on a separate near-wall grid is implemented in an unstructured, cell-centered finite-volume LES solver. The main challenge in its implementation is to couple two parallel, unstructured flow solvers for efficient boundary data communication and simultaneous time integrations. A coupling strategy with good load balancing and low processors underutilization is identified. Face mapping and interpolation procedures at the coupling interface are explained in detail. The method of manufactured solution is used for verifying the correct implementation of solver coupling, and parallel performance of the combined wall-modeled LES (WMLES) solver is investigated. The method has successfully been applied to several attached and separated flows, including a transitional flow over a flat plate and a separated flow over an airfoil at an angle of attack.

Deep-Water Benthic Foraminifers from the Paleocene and Eocene of the North Pacific Region: Paleontology, Biostratigraphy, and Paleoceanological Reconstructions

NASA Astrophysics Data System (ADS)

Olshanetskiy, D. M.

2015-12-01

A zonal scheme for the Lower Paleogene of the northern Pacific Ocean is proposed on the basis of the stratigraphic distribution of benthic foraminifers in the lower bathyal-abyssal beds studied in boreholes in the North and South Pacific regions. This scheme includes eight subdivisions (six zones and two subzones). The boundaries of the benthic zonal subdivisions are defined by bioevents (appearance or disappearance of stratigraphically important taxa) and are linked to the zonal scales based on planktonic foraminifers and calcareous nannoplankton. It is established that most of these bioevents are recognized subglobally. Apart from the evolutionary events, changes in the deep-water benthic foraminiferal assemblages were caused by changes in the paleooceanological environment. This allowed detailed characterization of a global mass extinction of assemblages of deep-water benthic foraminifers in the region studied. It is also established that changes in the assemblages of deep-water benthic foraminifers, observed in either change in their taxonomic composition or changes in abundance and diversity, resulted from the presence of different deep-water masses in the region.

A zonal wavefront sensor with multiple detector planes

NASA Astrophysics Data System (ADS)

Pathak, Biswajit; Boruah, Bosanta R.

2018-03-01

A conventional zonal wavefront sensor estimates the wavefront from the data captured in a single detector plane using a single camera. In this paper, we introduce a zonal wavefront sensor which comprises multiple detector planes instead of a single detector plane. The proposed sensor is based on an array of custom designed plane diffraction gratings followed by a single focusing lens. The laser beam whose wavefront is to be estimated is incident on the grating array and one of the diffracted orders from each grating is focused on the detector plane. The setup, by employing a beam splitter arrangement, facilitates focusing of the diffracted beams on multiple detector planes where multiple cameras can be placed. The use of multiple cameras in the sensor can offer several advantages in the wavefront estimation. For instance, the proposed sensor can provide superior inherent centroid detection accuracy that can not be achieved by the conventional system. It can also provide enhanced dynamic range and reduced crosstalk performance. We present here the results from a proof of principle experimental arrangement that demonstrate the advantages of the proposed wavefront sensing scheme.

Gyrokinetic Simulations of Transport Scaling and Structure

NASA Astrophysics Data System (ADS)

Hahm, Taik Soo

2001-10-01

There is accumulating evidence from global gyrokinetic particle simulations with profile variations and experimental fluctuation measurements that microturbulence, with its time-averaged eddy size which scales with the ion gyroradius, can cause ion thermal transport which deviates from the gyro-Bohm scaling. The physics here can be best addressed by large scale (rho* = rho_i/a = 0.001) full torus gyrokinetic particle-in-cell turbulence simulations using our massively parallel, general geometry gyrokinetic toroidal code with field-aligned mesh. Simulation results from device-size scans for realistic parameters show that ``wave transport'' mechanism is not the dominant contribution for this Bohm-like transport and that transport is mostly diffusive driven by microscopic scale fluctuations in the presence of self-generated zonal flows. In this work, we analyze the turbulence and zonal flow statistics from simulations and compare to nonlinear theoretical predictions including the radial decorrelation of the transport events by zonal flows and the resulting probability distribution function (PDF). In particular, possible deviation of the characteristic radial size of transport processes from the time-averaged radial size of the density fluctuation eddys will be critically examined.

A possible explanation for the divergent projection of ENSO amplitude change under global warming

NASA Astrophysics Data System (ADS)

Chen, Lin; Li, Tim; Yu, Yongqiang; Behera, Swadhin K.

2017-12-01

The El Niño-Southern Oscillation (ENSO) is the greatest climate variability on interannual time scale, yet what controls ENSO amplitude changes under global warming (GW) is uncertain. Here we show that the fundamental factor that controls the divergent projections of ENSO amplitude change within 20 coupled general circulation models that participated in the Coupled Model Intercomparison Project phase-5 is the change of climatologic mean Pacific subtropical cell (STC), whose strength determines the meridional structure of ENSO perturbations and thus the anomalous thermocline response to the wind forcing. The change of the thermocline response is a key factor regulating the strength of Bjerknes thermocline and zonal advective feedbacks, which ultimately lead to the divergent changes in ENSO amplitude. Furthermore, by forcing an ocean general circulation mode with the change of zonal mean zonal wind stress estimated by a simple theoretical model, a weakening of the STC in future is obtained. Such a change implies that ENSO variability might strengthen under GW, which could have a profound socio-economic consequence.

Detection of the secondary meridional circulation associated with the quasi-biennial oscillation

NASA Astrophysics Data System (ADS)

Ribera, P.; PeñA-Ortiz, C.; Garcia-Herrera, R.; Gallego, D.; Gimeno, L.; HernáNdez, E.

2004-09-01

The quasi-biennial oscillation (QBO) signal in stratospheric zonal and meridional wind, temperature, and geopotential height fields is analyzed based on the use of the National Centers for Environmental Prediction (NCEP) reanalysis (1958-2001). The multitaper method-singular value decomposition (MTM-SVD), a multivariate frequency domain analysis method, is used to detect significant and spatially coherent narrowband oscillations. The QBO is found as the most intense signal in the stratospheric zonal wind. Then, the MTM-SVD method is used to determine the patterns induced by the QBO at every stratospheric level and data field. The secondary meridional circulation associated with the QBO is identified in the obtained patterns. This circulation can be characterized by negative (positive) temperature anomalies associated with adiabatic rising (sinking) motions over zones of easterly (westerly) wind shear and over the subtropics and midlatitudes, while meridional convergence and divergence levels are found separated by a level of maximum zonal wind shear. These vertical and meridional motions form quasi-symmetric circulation cells over both hemispheres, though less intense in the Southern Hemisphere.

On the long-term variability of Jupiter and Saturn zonal winds

NASA Astrophysics Data System (ADS)

Sanchez-Lavega, A.; Garcia-Melendo, E.; Hueso, R.; Barrado-Izagirre, N.; Legarreta, J.; Rojas, J. F.

2012-12-01

We present an analysis of the long-term variability of Jupiter and Saturn zonal wind profiles at their upper cloud level as retrieved from cloud motion tracking on images obtained at ground-based observatories and with different spacecraft missions since 1979, encompassing about three Jovian and one Saturn years. We study the sensitivity and variability of the zonal wind profile in both planets to major planetary-scale disturbances and to seasonal forcing. We finally discuss the implications that these results have for current model efforts to explain the global tropospheric circulation in these planets. Acknowledgements: This work has been funded by Spanish MICIIN AYA2009-10701 with FEDER support, Grupos Gobierno Vasco IT-464-07 and UPV/EHU UFI11/55. [1] Sánchez-Lavega A., et al., Icarus, 147, 405-420 (2000). [2] García-Melendo E., Sánchez LavegaA., Icarus, 152, 316-330 (2001) [3] Sánchez-Lavega A., et al., Nature, 423, 623-625 (2003). [4] García-Melendo E., et al., Geophysical Research Letters, 37, L22204 (2010).

Transonic Navier-Stokes wing solution using a zonal approach. Part 1: Solution methodology and code validation

NASA Technical Reports Server (NTRS)

Flores, J.; Gundy, K.; Gundy, K.; Gundy, K.; Gundy, K.; Gundy, K.

1986-01-01

A fast diagonalized Beam-Warming algorithm is coupled with a zonal approach to solve the three-dimensional Euler/Navier-Stokes equations. The computer code, called Transonic Navier-Stokes (TNS), uses a total of four zones for wing configurations (or can be extended to complete aircraft configurations by adding zones). In the inner blocks near the wing surface, the thin-layer Navier-Stokes equations are solved, while in the outer two blocks the Euler equations are solved. The diagonal algorithm yields a speedup of as much as a factor of 40 over the original algorithm/zonal method code. The TNS code, in addition, has the capability to model wind tunnel walls. Transonic viscous solutions are obtained on a 150,000-point mesh for a NACA 0012 wing. A three-order-of-magnitude drop in the L2-norm of the residual requires approximately 500 iterations, which takes about 45 min of CPU time on a Cray-XMP processor. Simulations are also conducted for a different geometrical wing called WING C. All cases show good agreement with experimental data.

The quasi 2 day wave response in TIME-GCM nudged with NOGAPS-ALPHA

NASA Astrophysics Data System (ADS)

Wang, Jack C.; Chang, Loren C.; Yue, Jia; Wang, Wenbin; Siskind, D. E.

2017-05-01

The quasi 2 day wave (QTDW) is a traveling planetary wave that can be enhanced rapidly to large amplitudes in the mesosphere and lower thermosphere (MLT) region during the northern winter postsolstice period. In this study, we present five case studies of QTDW events during January and February 2005, 2006 and 2008-2010 by using the Thermosphere-Ionosphere-Mesosphere Electrodynamics-General Circulation Model (TIME-GCM) nudged with the Navy Operational Global Atmospheric Prediction System-Advanced Level Physics High Altitude (NOGAPS-ALPHA) Weather Forecast Model. With NOGAPS-ALPHA introducing more realistic lower atmospheric forcing in TIME-GCM, the QTDW events have successfully been reproduced in the TIME-GCM. The nudged TIME-GCM simulations show good agreement in zonal mean state with the NOGAPS-ALPHA 6 h reanalysis data and the horizontal wind model below the mesopause; however, it has large discrepancies in the tropics above the mesopause. The zonal mean zonal wind in the mesosphere has sharp vertical gradients in the nudged TIME-GCM. The results suggest that the parameterized gravity wave forcing may need to be retuned in the assimilative TIME-GCM.

New observations of Yanai waves and equatorial inertia-gravity waves in the Pacific Ocean

NASA Astrophysics Data System (ADS)

Farrar, J. T.; Durland, T.

2011-12-01

In the 1970's and 1980's, there was a great deal of research activity on near-equatorial variability at periods of days to weeks associated with oceanic equatorial inertia-gravity waves and Yanai waves. At that time, the measurements available for studying these waves were much more limited than today: most of the available observations were from island tide gauges and a handful of short mooring records. We use more than a decade of the extensive modern data record from the TAO/TRITON mooring array in the Pacific Ocean to re-examine the internal-wave climate in the equatorial Pacific, with a focus on interpretation of the zonal-wavenumber/frequency spectrum of surface dynamic height relative to 500-m depth. Many equatorial-wave meridional modes can be identified, for both the first and second baroclinic mode. We also estimated zonal-wavenumber/frequency spectra for the zonal and meridional wind stress components. The location and extent of spectral peaks in dynamic height is readily rationalized using basic, linear theory of forced equatorial waves and the observed wind stress spectrum.

Laboratory modeling of multiple zonal jets on the polar beta-plane

NASA Astrophysics Data System (ADS)

Afanasyev, Y.

2011-12-01

Zonal jets observed in the oceans and atmospheres of planets are studied in a laboratory rotating tank. The fluid layer in the rotating tank has parabolic free surface and dynamically simulates the polar beta-plane where the Coriolis parameter varies quadratically with distance from the pole. Velocity and surface elevation fields are measured with an optical altimetry method (Afanasyev et al., Exps Fluids 2009). The flows are induced by a localized buoyancy source along radial direction. The baroclinic flow consisting of a field of eddies propagates away from the source due West and forms zonal jets (Fig. 1). Barotropic jets ahead of the baroclinic flow are formed by radiation of beta plumes. Inside the baroclinic flow the jets flow between the chains of eddies. Experimental evidence of so-called noodles (baroclinic instability mode with motions in the radial, North-South direction) theoretically predicted by Berloff et al. (JFM, JPO 2009) was found in our experiments. Beta plume radiation mechanism and the mechanism associated with the instability of noodles are likely to contribute to formation of jets in the baroclinic flow.

North-South precipitation patterns in western North America on interannual-to-decadal timescales

USGS Publications Warehouse

Dettinger, M.D.; Cayan, D.R.; Diaz, Henry F.; Meko, D.M.

1998-01-01

The overall amount of precipitation deposited along the West Coast and western cordillera of North America from 25??to 55??N varies from year to year, and superimposed on this domain-average variability are varying north-south contrasts on timescales from at least interannual to interdecadal. In order to better understand the north-south precipitation contrasts, their interannual and decadal variations are studied in terms of how much they affect overall precipitation amounts and how they are related to large-scale climatic patterns. Spatial empirical orthogonal functions (EOFs) and spatial moments (domain average, central latitude, and latitudinal spread) of zonally averaged precipitation anomalies along the westernmost parts of North America are analyzed, and each is correlated with global sea level pressure (SLP) and sea surface temperature series, on interannual (defined here as 3-7 yr) and decadal (>7 yr) timescales. The interannual band considered here corresponds to timescales that are particularly strong in tropical climate variations and thus is expected to contain much precipitation variability that is related to El Nino-Southern Oscillation; the decadal scale is defined so as to capture the whole range of long-term climatic variations affecting western North America. Zonal EOFs of the interannual and decadal filtered versions of the zonal-precipitation series are remarkably similar. At both timescales, two leading EOFs describe 1) a north-south seesaw of precipitation pivoting near 40??N and 2) variations in precipitation near 40??N, respectively. The amount of overall precipitation variability is only about 10% of the mean and is largely determined by precipitation variations around 40??-45??N and most consistently influenced by nearby circulation patterns; in this sense, domain-average precipitation is closely related to the second EOF. The central latitude and latitudinal spread of precipitation distributions are strongly influenced by precipitation variations in the southern parts of western North America and are closely related to the first EOF. Central latitude of precipitation moves south (north) with tropical warming (cooling) in association with midlatitude western Pacific SLP variations, on both interannual and decadal timescales. Regional patterns and zonal averages of precipitation-sensitive tree-ring series are used to corroborate these patterns and to extend them into the past and appear to share much long- and short-term information with the instrumentally based zonal precipitation EOFs and moments.The overall amount of precipitation deposited along the West Coast and western cordillera of North America from 25?? to 55 ??N varies from year to year, and superimposed on this domain-average variability are varying north-south contrasts on timescales from at least interannual to interdecadal. In order to better understand the north-south precipitation contrasts, their interannual and decadal variations are studied in terms of how much they affect overall precipitation amounts and how they are related to large-scale climatic patterns. Spatial empirical orthogonal functions (EOFs) and spatial moments (domain average, central latitude, and latitudinal spread) of zonally averaged precipitation anomalies along the westernmost parts of North America are analyzed, and each is correlated with global sea level pressure (SLP) and sea surface temperature series, on interannual (defined here as 3-7 yr) and decadal (>7 yr) timescales. The interannual band considered here corresponds to timescales that are particularly strong in tropical climate variations and thus is expected to contain much precipitation variability that is related to El Nino-Southern Oscillation; the decadal scale is defined so as to capture the whole range of long-term climatic variations affecting western North America. Zonal EOFs of the interannual and decadal filtered versions of the zonal-precipitation series are remarkably similar. At both tim

Zonal subdivision of marine sequences: achievements and discrepancies

NASA Astrophysics Data System (ADS)

Gladenkov, Yuri

2010-05-01

It was 150 years ago when a notion of zone was introduced into stratigraphy. By the present time zonal units with a duration of 0.3-3.0 M.y. in average have been established virtually for all systems and stages of the Phanerozoic. Their quantity reached 300. It is not a chance that zonal stratigraphy is considered to be one of the most significant achievement of the modern geology. There are different interpretations of essence and goals of zonal stratigraphy, techniques of separation of zones, and evaluation of zones as stratigraphic units. Particularly it is reflected in International Stratigraphic Guide (Murphy, Salvador, 1999), Russian Stratigraphic Code (Zhamoida, 2006), and a number of stratigraphic reports of the last years. It concerns different approaches to: (a) establishment of different types of zones (biostratigraphic zones and chronozones, oppel-zones and biohorizons, etc.); (b) assessment of spatial distribution of zones (global or provincial) and a role of sedimentological factor; (c) definition of zones as stratigraphic units (relationships with geostratigraphic units of the standard and regional scales). The latest publications show that because of the different interpretations of zones, authors should explain usage of certain type of zone (for example, when they use the terms "interval-zone" or "assemblage-zone", what limitations stem from application of datum-levels, and others). It is common opinion, that biostratigraphic zones used widely by paleontologists and stratigraphers cannot be a final goal of stratigraphy although they provide a base for solution of many important problems (definition of certain stratigraphic levels, correlation of different biofacies, and others). At the same time, the most important stratigraphic units are chronozones, which correspond to stages or phases of geological evolutio of basins and are marked by distinct fossil assemblages and other properties (magnetic and other characteristics) in the type sections. Therefore, in Russian Stratigraphic Code biostratigraphic zones are regarded as special units and chronozones as general units of integrated substantiation. Now it becomes clear that unlike chronozones, biostratigraphic zones often have diachronous boundaries and provincial but not global distribution. This is not frequently taken into account at practical correlations. A special attention should be paid to a scale of these occurrences when refining stratigraphic scales. It should not be forgotten that magneto-, litho-, and cyclostratigraphic markers should be used to assess isochronism of zonal boundaries. Many zonal reconstructions do not look faultless without such a control. If we consider zonal stratigraphy not only in applied aspect but in a wide scientific one, it fits in with the geohistorical concept of stratigraphy, which is now reflected in "dynamic", or "ecosystem", or biosphere stratigraphy (Gladenkov, 2004). Establishment of stages of geological development of the Earth and its separate parts, reconstructions of changes in the organic world at the biogeocoenotic and biospheric levels, complex study of paleobiotic assemblages are thought to be one of principal lines of stratigraphic investigations. At present discussions are being organized and experience of zonal stratigraphy is being summarized in Russia. In particular, a large book titled "Biozonal stratigraphy of the Phanerozoic in Russia" and devoted to this problem has been published recently (Koren, 2006). References 1. Gladenkov, Yu.B., 2004. Biosphere Stratigraphy (Stratigraphic Problems in the Early XXI Century). Moscow: GEOS, 120 pp. (in Russian). 2. Koren, T.N., ed., 2006. Biozonal stratigraphy of the Phanerozoic in Russia. Saint-Petersburg: VSEGEI Press, 256 рp. (in Russian). 3. Murphy, M.A., and Salvador, A., eds., 1999. International Stratigraphic Guide: An abridged version. Episodes, 22 (4): 255-271. 4. Zhamoida. A.I., ed., 2006. Russian Stratigraphic Guide (3rd Edition). Saint-Petersburg: VSEGEI Press, 95 pp. (in Russian).

Application of multiple grids topology to supersonic internal/external flow interactions

NASA Technical Reports Server (NTRS)

Kathong, M.; Tiwari, S. N.; Smith, R. E.

1988-01-01

For many aerodynamic applications, it is very difficult to construct a smooth body-fitted grid around complex configurations. An approach, called 'multiple grids' or 'zonal grids', which subdivides the entire physical domain into several subdomains, is used to overcome such difficulties. The approach is applied to obtain the solutions to the Euler equations for the supersonic internal/external flow around a fighter-aircraft configuration. Steady-state solutions are presented for Mach 2 at 0, 3.79, 7, and 10 deg angles-of-attack. The problem of conservative treatment at the zonal interfaces is also addressed.

Zonal flow generation in inertial confinement fusion implosions

DOE PAGES

Peterson, J. L.; Humbird, K. D.; Field, J. E.; ...

2017-03-06

A supervised machine learning algorithm trained on a multi-petabyte dataset of inertial confinement fusion simulations has identified a class of implosions that robustly achieve high yield, even in the presence of drive variations and hydrodynamic perturbations. These implosions are purposefully driven with a time-varying asymmetry, such that coherent flow generation during hotspot stagnation forces the capsule to self-organize into an ovoid, a shape that appears to be more resilient to shell perturbations than spherical designs. Here this new class of implosions, whose configurations are reminiscent of zonal flows in magnetic fusion devices, may offer a path to robust inertial fusion.

An overview of wave-mean flow interactions during the winter of 1978-79 derived from LIMS observations. [Limb Infrared Monitor of Stratosphere

NASA Technical Reports Server (NTRS)

Gille, J. C.; Lyjak, L. V.

1984-01-01

Gradient winds, Eliassen-Palm (EP) fluxes and flux divergences, and the squared refractive index for planetary waves have been calculated from mapped data from the Limb Infrared Monitor of the Stratosphere (LIMS) experiment on Nimbus 7. The changes in the zonal mean atmospheric state, from early winter through 3 disturbances, is described. Convergence or divergence of the EP fluxes clearly produces changes in the zonal mean wind. The steering of the waves by the refractive index structure is not as clear on a daily basis.

Role of zonal flow predator-prey oscillations in triggering the transition to H-mode confinement.

PubMed

Schmitz, L; Zeng, L; Rhodes, T L; Hillesheim, J C; Doyle, E J; Groebner, R J; Peebles, W A; Burrell, K H; Wang, G

2012-04-13

Direct evidence of zonal flow (ZF) predator-prey oscillations and the synergistic roles of ZF- and equilibrium E×B flow shear in triggering the low- to high-confinement (L- to H-mode) transition in the DIII-D tokamak is presented. Periodic turbulence suppression is first observed in a narrow layer at and just inside the separatrix when the shearing rate transiently exceeds the turbulence decorrelation rate. The final transition to H mode with sustained turbulence and transport reduction is controlled by equilibrium E×B shear due to the increasing ion pressure gradient.

Observations of the Mf ocean tide from Geosat altimetry

NASA Technical Reports Server (NTRS)

Cartwright, David E.; Ray, Richard D.

1990-01-01

Zonal averages of the 13.66-day Mf tide are derived from one year of Geosat altimetry records. The orbit errors are reduced by 1/revolution corrections taken over long (several day) arcs. The short-period tides are removed using a model previously derived from the same data. The Mf zonal averages indicate definite nonequilibrium character at nearly all latitudes. The imaginary admittances indicate a Q of at least 8; such a value is consistent with a simplified theory of coupled gravitational and vorticity modes and suggests a value for Proudman's 'friction period' about 123 days.

Long period perturbations of earth satellite orbits. [Von Zeipel method and zonal harmonics

NASA Technical Reports Server (NTRS)

Wang, K. C.

1979-01-01

All the equations involved in extending the PS phi solution to include the long periodic and second order secular effects of the zonal harmonics are presented. Topics covered include DSphi elements and relations for their conconical transformation into the PS phi elements; the solution algorithm based on the Von Zeipel method; and the elimination of long periodic terms and analytical integration of primed variables. The equations were entered into the ASOP program, checked out, and verified. Comparisons with numerical integrations show the long period theory to be accurate within several meters after 800 revolutions.

Zonal flow generation in inertial confinement fusion implosions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Peterson, J. L.; Humbird, K. D.; Field, J. E.

A supervised machine learning algorithm trained on a multi-petabyte dataset of inertial confinement fusion simulations has identified a class of implosions that robustly achieve high yield, even in the presence of drive variations and hydrodynamic perturbations. These implosions are purposefully driven with a time-varying asymmetry, such that coherent flow generation during hotspot stagnation forces the capsule to self-organize into an ovoid, a shape that appears to be more resilient to shell perturbations than spherical designs. Here this new class of implosions, whose configurations are reminiscent of zonal flows in magnetic fusion devices, may offer a path to robust inertial fusion.

Why the stratospheric zonal and meridional wind changes trend in the mid -1990s?

NASA Astrophysics Data System (ADS)

Krizan, P.

2016-12-01

This poster tries to explain the reasons for trend change of the stratospheric zonal and meridional wind in the mid-1990s. In the areas of negative (positive) wind speed trend before 1995 the positive (negative) trend is observed after this point Similar change is observed also for total ozone where we observe negative trend before 1995 and positive one after. We use MERRA reanalysis data especially monthly mean of geopotential from January to March. We suppose the position and strength of polar vortex and Aleutian high plays here very important role..

A preliminary study of thermosphere and mesosphere wind observed by Fabry-Perot over Kelan, China

NASA Astrophysics Data System (ADS)

Yu, Tao; Huang, Cong; Zhao, Guangxin; Mao, Tian; Wang, Yungang; Zeng, Zhongcao; Wang, Jingsong; Xia, Chunliang

2014-06-01

A Fabry-Perot interferometer (FPI) system was deployed in Kelan (38.7°N, 111.6°E), center China in November 2011, which observes the airglows at wavelengths of 892.0 nm, 557.7 nm, and 630.0 nm from OH and OI emissions in the upper atmosphere, to derive the wind and temperature at heights around 87 km, 97 km, and 250 km, respectively. From late 2011 through 2013 a series of more than 4500 measurements at each height are validated according to manufacture data quality criteria. By using these data, the morphology of wind in the mesosphere and thermosphere is investigated in this study. Preliminary results are as follows: (1) As for the diurnal variation, meridional and zonal winds at heights of 87 km and 97 km, which are derived through 892.0 nm and 557.7 nm airglows, usually range from -50 m/s to 30 m/s and -50 m/s to 50 m/s, respectively, with typical random errors of about 6-10 m/s at 87 km and 2-3 m/s at 97 km. Meridional winds usually are northward at dusk, southward at middle night, and back to northward at dawn; and zonal winds usually are eastward at dusk, westward at middle night, and back to eastward at dawn. The monthly mean winds are in good agreement with those of HWM93 results. Meridional and zonal winds at a height of 250 km, which are derived through 630.0 nm nightglow, range from -110 m/s to 80 m/s with typical random errors of about 8-10 m/s. Meridional winds usually are northward at dusk, southward at middle night, and back to northward at dawn; and zonal winds usually are eastward at dusk, zero at middle night, and westward at dawn; and they are also well consistent with HWM93 results. (2) As for the seasonal variation, meridional winds at the heights of 87 km and 97 km have a visible annual variation at 12-17 LT and with a little semiannual variation at all other hours, but the zonal winds at the heights of 87 km and 97 km have a semiannual variation all night. The seasonal dependence of the winds, both meridional and zonal winds, at the height of 250 km is generally annual, but isolated cases of semiannual variation are observed. (3) The horizontal winds at 250 km evidently respond to the two storms of July 2012, apparent enhancement of the velocity of the southwestward wind. But no other obvious storm effects can be found from the winds at 87 km and 97 km during the same period.

Field evaluation of commercial repellents against the floodwater mosquito Psorophora columbiae (Diptera: Culicidae) in St. Johns County, Florida.

PubMed

Qualls, Whitney A; Xue, Rui-De; Holt, J Adam; Smith, Mike L; Moeller, Jeanne J

2011-11-01

Three plant-based repellents-REPEL LEMON Eucalyptus Insect Repellent Lotion (active ingredient [AI] 30% oil of eucalyptus), Bite Blocker Xtreme Sportsman Organic Insect Repellent ([AI] 3% soybean oil, 6% geranium oil, and 8% castor oil), and Bite Blocker BioUD Insect Repellent ([AI] 7.75% 2-undecanone)--were evaluated against OFF! ([AI] 15% N,N-diethyl-m-toluamide or N,N-diethyl-3-methyl-benzamide, also called DEET) at a field site in Elkton, FL, to determine the mean protection time provided against Psorophora columbiae (Dyar & Knab). These products provided different protection times against biting Ps. columbiae. REPEL provided the longest protection time (330 min) followed by Bite Blocker Xtreme Sportsman (163 min), Bite Blocker BioUD (140 min), and OFF! (130 min). This study provides the first information about plant-based insect repellent protection times against Ps. columbiae.

Field evaluation of New Mountain Sandalwood Mosquito Sticks and New Mountain Sandalwood Botanical Repellent against mosquitoes in North Queensland, Australia.

PubMed

Ritchie, Scott A; Williams, Craig R; Montgomery, Brian L

2006-03-01

The mosquito repellent efficacy of New Mountain Sandalwood Mosquito Sticks (containing 0.5% w/w essential oils) and New Mountain Sandalwood Botanical Repellent (containing soybean and geranium oils) was assessed. Tests were conducted in the field with 4 volunteers in a wooded area near Cairns, North Queensland, Australia. Predominant biting species were Verrallina funerea and Ve. lineata. A pair of burning Mosquito Sticks immediately upwind of the subject (acting as an area repellent) provided a 73.1% mean reduction in mosquito landing and probing over the 3-h test period. The Botanical Repellent and a DEET-based control were both 100% effective in preventing mosquito probing for 3 h. These data are consistent with other studies of area repellents in that such products provide significant protection from mosquito bites, albeit inferior to the protection provided by topically applied repellents.

Behavioral effects of plant-derived essential oils in the geller type conflict test in mice.

PubMed

Umezu, T

2000-06-01

The present study was conducted to further explore plant-derived essential oils that possess an anticonflict effect using the Geller type conflict test in ICR mice. The benzodiazepine anxiolytic diazepam increased the response (lever pressing) rate during the alarm period (i.e., an anticonflict effect), but the 5-HT1A partial agonist buspirone did not. Oils of juniper, cypress, geranium and jasmine did not produce any effect in this test. Frankincense oil decreased the response rate during the safe period at 1600 mg/kg, but did not exhibit any effect on the response rate during the alarm period. In contrast, lavender oil increased the response rate during the alarm period in a dose-dependent manner in the same manner as diazepam. These results indicate that not only rose oil but also lavender oil possess an anticonflict effect in mice.

Antimicrobial and antiplasmid activities of essential oils.

PubMed

Schelz, Zsuzsanna; Molnar, Joseph; Hohmann, Judit

2006-06-01

The antimicrobial and antiplasmid activities of essential oils (orange oil, eucalyptus oil, fennel oil, geranium oil, juniper oil, peppermint oil, rosemary oil, purified turpentine oil, thyme oil, Australian tea tree oil) and of menthol, the main component of peppermint oil, were investigated. The antimicrobial activities were determined on the Gram (+) Staphylococcus epidermidis and the Gram (-) Escherichia coli F'lac K12 LE140, and on two yeast Saccharomyces cerevisiae 0425 delta/1 and 0425 52C strains. The antiplasmid activities were investigated on E. coli F'lac bacterial strain. Each of the oils exhibited antimicrobial activity and three of them antiplasmid action. The interaction of peppermint oil and menthol with the antibiotics was studied on the same bacterial strain with the checkerboard method. Peppermint oil and menthol displayed additive synergy with oxytetracycline. A new mechanism of plasmid curing was established for one of the oil components.

Effects of aromatherapy massage on blood pressure and lipid profile in korean climacteric women.

PubMed

Hur, Myung-Haeng; Oh, Heeyoung; Lee, Myeong Soo; Kim, Chan; Choi, Ae-Na; Shin, Gil-Ran

2007-09-01

This study investigated the effects of aromatherapy massage on the lipid profile and blood pressure in Korean climacteric women. A wait-listed control group, pretest-posttest design was used. The subjects comprised 58 climacteric women: 30 in the experimental group and 28 in the control group. Aromatherapy massage using lavender, rose geranium, rose, and jasmine was given to the experimental group only. Each massage session lasted 30 minutes, and was performed once weekly for two 8-week periods with self abdominal daily massage at home. The intervention produced significant differences in the systolic blood pressure compare to pretreatment and significant differences in systolic and diastolic blood pressures at posttreatment between the two groups. These results suggest that aromatherapy massage may exert positive effects on blood pressure. However, more objective, clinical measures should be applied in a future study with a randomized placebo-controlled design.