A study of the dynamics of seizure propagation across micro domains in the vicinity of the seizure onset zone.

PubMed

Basu, Ishita; Kudela, Pawel; Korzeniewska, Anna; Franaszczuk, Piotr J; Anderson, William S

2015-08-01

The use of micro-electrode arrays to measure electrical activity from the surface of the brain is increasingly being investigated as a means to improve seizure onset zone (SOZ) localization. In this work, we used a multivariate autoregressive model to determine the evolution of seizure dynamics in the [Formula: see text] Hz high frequency band across micro-domains sampled by such micro-electrode arrays. We showed that a directed transfer function (DTF) can be used to estimate the flow of seizure activity in a set of simulated micro-electrode data with known propagation pattern. We used seven complex partial seizures recorded from four patients undergoing intracranial monitoring for surgical evaluation to reconstruct the seizure propagation pattern over sliding windows using a DTF measure. We showed that a DTF can be used to estimate the flow of seizure activity in a set of simulated micro-electrode data with a known propagation pattern. In general, depending on the location of the micro-electrode grid with respect to the clinical SOZ and the time from seizure onset, ictal propagation changed in directional characteristics over a 2-10 s time scale, with gross directionality limited to spatial dimensions of approximately [Formula: see text]. It was also seen that the strongest seizure patterns in the high frequency band and their sources over such micro-domains are more stable over time and across seizures bordering the clinically determined SOZ than inside. This type of propagation analysis might in future provide an additional tool to epileptologists for characterizing epileptogenic tissue. This will potentially help narrowing down resection zones without compromising essential brain functions as well as provide important information about targeting anti-epileptic stimulation devices.

Shear zone junctions: Of zippers and freeways

NASA Astrophysics Data System (ADS)

Passchier, Cees W.; Platt, John P.

2017-02-01

Ductile shear zones are commonly treated as straight high-strain domains with uniform shear sense and characteristic curved foliation trails, bounded by non-deforming wall rock. Many shear zones, however, are branched, and if movement on such branches is contemporaneous, the resulting shape can be complicated and lead to unusual shear sense arrangement and foliation geometries in the wall rock. For Y-shaped shear zone triple junctions with three joining branches and transport direction at a high angle to the branchline, only eight basic types of junction are thought to be stable and to produce significant displacement. The simplest type, called freeway junctions, have similar shear sense in all three branches. The other types show joining or separating behaviour of shear zone branches similar to the action of a zipper. Such junctions may have shear zone branches that join to form a single branch (closing zipper junction), or a single shear zone that splits to form two branches, (opening zipper junction). All categories of shear zone junctions show characteristic foliation patterns and deflection of markers in the wall rock. Closing zipper junctions are unusual, since they form a non-active zone with opposite deflection of foliations in the wall rock known as an extraction fault or wake. Shear zipper junctions can form domains of overprinting shear sense along their flanks. A small and large field example are given from NE Spain and Eastern Anatolia. The geometry of more complex, 3D shear zone junctions with slip parallel and oblique to the branchline is briefly discussed.

A study of the dynamics of seizure propagation across micro domains in the vicinity of the seizure onset zone

NASA Astrophysics Data System (ADS)

Basu, Ishita; Kudela, Pawel; Korzeniewska, Anna; Franaszczuk, Piotr J.; Anderson, William S.

2015-08-01

Objective. The use of micro-electrode arrays to measure electrical activity from the surface of the brain is increasingly being investigated as a means to improve seizure onset zone (SOZ) localization. In this work, we used a multivariate autoregressive model to determine the evolution of seizure dynamics in the 70-110 Hz high frequency band across micro-domains sampled by such micro-electrode arrays. We showed that a directed transfer function (DTF) can be used to estimate the flow of seizure activity in a set of simulated micro-electrode data with known propagation pattern. Approach. We used seven complex partial seizures recorded from four patients undergoing intracranial monitoring for surgical evaluation to reconstruct the seizure propagation pattern over sliding windows using a DTF measure. Main results. We showed that a DTF can be used to estimate the flow of seizure activity in a set of simulated micro-electrode data with a known propagation pattern. In general, depending on the location of the micro-electrode grid with respect to the clinical SOZ and the time from seizure onset, ictal propagation changed in directional characteristics over a 2-10 s time scale, with gross directionality limited to spatial dimensions of approximately 9 m{{m}2}. It was also seen that the strongest seizure patterns in the high frequency band and their sources over such micro-domains are more stable over time and across seizures bordering the clinically determined SOZ than inside. Significance. This type of propagation analysis might in future provide an additional tool to epileptologists for characterizing epileptogenic tissue. This will potentially help narrowing down resection zones without compromising essential brain functions as well as provide important information about targeting anti-epileptic stimulation devices.

The Galicia-Ossa-Morena Zone: Proposal for a new zone of the Iberian Massif. Variscan implications

NASA Astrophysics Data System (ADS)

Arenas, Ricardo; Díez Fernández, Rubén; Rubio Pascual, Francisco J.; Sánchez Martínez, Sonia; Martín Parra, Luis Miguel; Matas, Jerónimo; González del Tánago, José; Jiménez-Díaz, Alberto; Fuenlabrada, Jose M.; Andonaegui, Pilar; Garcia-Casco, Antonio

2016-06-01

Correlation of a group of allochthonous terranes (referred to as basal, ophiolitic and upper units) exposed in the NW and SW of the Iberian Massif, is used to propose a new geotectonic zone in the southern branch of the Variscan Orogen: the Galicia-Ossa-Morena Zone. Recent advances in SW Iberia identify most of the former Ossa-Morena Zone as another allochthonous complex of the Iberian Massif, the Ossa-Morena Complex, equivalent to the Cabo Ortegal, Órdenes, Malpica-Tui, Bragança and Morais complexes described in NW Iberia. The new geotectonic zone and its counterparts along the rest of the Variscan Orogen constitute an Internal Variscan Zone with ophiolites and units affected by high-P metamorphism. The Galicia-Ossa-Morena Zone includes a Variscan suture and pieces of continental crust bearing the imprint of Ediacaran-Cambrian events related to the activity of peri-Gondwanan magmatic arcs (Cadomian orogenesis). In the Iberian Massif, the general structure of this geotectonic zone represents a duplication of the Gondwanan platform, the outboard sections being juxtaposed on top of domains located closer to the mainland before amalgamation. This interpretation offers an explanation that overcomes some issues regarding the differences between the stratigraphic and paleontological record of the central and southern sections of the Iberian Massif. Also, equivalent structural relationships between other major geotectonic domains of the rest of the Variscan Orogen are consistent with our interpretation and allow suspecting similar configurations along strike of the orogen. A number of issues may be put forward in this respect that potentially open new lines of thinking about the architecture of the Variscan Orogen.

Ocean acidification in the coastal zone from an organism's perspective: multiple system parameters, frequency domains, and habitats.

PubMed

Waldbusser, George G; Salisbury, Joseph E

2014-01-01

Multiple natural and anthropogenic processes alter the carbonate chemistry of the coastal zone in ways that either exacerbate or mitigate ocean acidification effects. Freshwater inputs and multiple acid-base reactions change carbonate chemistry conditions, sometimes synergistically. The shallow nature of these systems results in strong benthic-pelagic coupling, and marine invertebrates at different life history stages rely on both benthic and pelagic habitats. Carbonate chemistry in coastal systems can be highly variable, responding to processes with temporal modes ranging from seconds to centuries. Identifying scales of variability relevant to levels of biological organization requires a fuller characterization of both the frequency and magnitude domains of processes contributing to or reducing acidification in pelagic and benthic habitats. We review the processes that contribute to coastal acidification with attention to timescales of variability and habitats relevant to marine bivalves.

Defining the Fresnel zone for broadband radiation.

PubMed

Pearce, Jeremy; Mittleman, Daniel

2002-11-01

The concept of the Fresnel zone is central to many areas of imaging. In tomographic imaging, the transverse spatial resolution can be limited by the size of the first Fresnel zone, usually defined only for monochromatic radiation. With the increasing prevalence of broadband tomographic imaging systems, a generalization of this concept is required. Here, a proposed generalization is described in the context of femtosecond optics, and experimentally verified using terahertz time-domain spectroscopy. Based on this definition, a simple zone plate design is demonstrated.

Optimising predictor domains for spatially coherent precipitation downscaling

NASA Astrophysics Data System (ADS)

Radanovics, S.; Vidal, J.-P.; Sauquet, E.; Ben Daoud, A.; Bontron, G.

2012-04-01

Relationships between local precipitation (predictands) and large-scale circulation (predictors) are used for statistical downscaling purposes in various contexts, from medium-term forecasting to climate change impact studies. For hydrological purposes like flood forecasting, the downscaled precipitation spatial fields have furthermore to be coherent over possibly large basins. This thus first requires to know what predictor domain can be associated to the precipitation over each part of the studied basin. This study addresses this issue by identifying the optimum predictor domains over the whole of France, for a specific downscaling method based on a analogue approach and developed by Ben Daoud et al. (2011). The downscaling method used here is based on analogies on different variables: temperature, relative humidity, vertical velocity and geopotentials. The optimum predictor domain has been found to consist of the nearest grid cell for all variables except geopotentials (Ben Daoud et al., 2011). Moreover, geopotential domains have been found to be sensitive to the target location by Obled et al. (2002), and the present study thus focuses on optimizing the domains of this specific predictor over France. The predictor domains for geopotential at 500 hPa and 1000 hPa are optimised for 608 climatologically homogeneous zones in France using the ERA-40 reanalysis data for the large-scale predictors and local precipitation from the Safran near-surface atmospheric reanalysis (Vidal et al., 2010). The similarity of geopotential fields is measured by the Teweles and Wobus shape criterion. The predictive skill of different predictor domains for the different regions is tested with the Continuous Ranked Probability Score (CRPS) for the 25 best analogue days found with the statistical downscaling method. Rectangular predictor domains of different sizes, shapes and locations are tested, and the one that leads to the smallest CRPS for the zone in question is retained. The

Tandem SAM Domain Structure of Human Caskin1: A Presynaptic, Self-Assembling Scaffold for CASK

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stafford, Ryan L.; Hinde, Elizabeth; Knight, Mary Jane

2012-02-07

The synaptic scaffolding proteins CASK and Caskin1 are part of the fibrous mesh of proteins that organize the active zones of neural synapses. CASK binds to a region of Caskin1 called the CASK interaction domain (CID). Adjacent to the CID, Caskin1 contains two tandem sterile a motif (SAM) domains. Many SAM domains form polymers so they are good candidates for forming the fibrous structures seen in the active zone. We show here that the SAM domains of Caskin1 form a new type of SAM helical polymer. The Caskin1 polymer interface exhibits a remarkable segregation of charged residues, resulting in amore » high sensitivity to ionic strength in vitro. The Caskin1 polymers can be decorated with CASK proteins, illustrating how these proteins may work together to organize the cytomatrix in active zones.« less

A knowledge-based approach to automated flow-field zoning for computational fluid dynamics

NASA Technical Reports Server (NTRS)

Vogel, Alison Andrews

1989-01-01

An automated three-dimensional zonal grid generation capability for computational fluid dynamics is shown through the development of a demonstration computer program capable of automatically zoning the flow field of representative two-dimensional (2-D) aerodynamic configurations. The applicability of a knowledge-based programming approach to the domain of flow-field zoning is examined. Several aspects of flow-field zoning make the application of knowledge-based techniques challenging: the need for perceptual information, the role of individual bias in the design and evaluation of zonings, and the fact that the zoning process is modeled as a constructive, design-type task (for which there are relatively few examples of successful knowledge-based systems in any domain). Engineering solutions to the problems arising from these aspects are developed, and a demonstration system is implemented which can design, generate, and output flow-field zonings for representative 2-D aerodynamic configurations.

Measuring kinetic drivers of pneumolysin pore structure.

PubMed

Gilbert, Robert J C; Sonnen, Andreas F-P

2016-05-01

Most membrane attack complex-perforin/cholesterol-dependent cytolysin (MACPF/CDC) proteins are thought to form pores in target membranes by assembling into pre-pore oligomers before undergoing a pre-pore to pore transition. Assembly during pore formation is into both full rings of subunits and incomplete rings (arcs). The balance between arcs and full rings is determined by a mechanism dependent on protein concentration in which arc pores arise due to kinetic trapping of the pre-pore forms by the depletion of free protein subunits during oligomerization. Here we describe the use of a kinetic assay to study pore formation in red blood cells by the MACPF/CDC pneumolysin from Streptococcus pneumoniae. We show that cell lysis displays two kinds of dependence on protein concentration. At lower concentrations, it is dependent on the pre-pore to pore transition of arc oligomers, which we show to be a cooperative process. At higher concentrations, it is dependent on the amount of pneumolysin bound to the membrane and reflects the affinity of the protein for its receptor, cholesterol. A lag occurs before cell lysis begins; this is dependent on oligomerization of pneumolysin. Kinetic dissection of cell lysis by pneumolysin demonstrates the capacity of MACPF/CDCs to generate pore-forming oligomeric structures of variable size with, most likely, different functional roles in biology.

On the bistable zone of milling processes

PubMed Central

Dombovari, Zoltan; Stepan, Gabor

2015-01-01

A modal-based model of milling machine tools subjected to time-periodic nonlinear cutting forces is introduced. The model describes the phenomenon of bistability for certain cutting parameters. In engineering, these parameter domains are referred to as unsafe zones, where steady-state milling may switch to chatter for certain perturbations. In mathematical terms, these are the parameter domains where the periodic solution of the corresponding nonlinear, time-periodic delay differential equation is linearly stable, but its domain of attraction is limited due to the existence of an unstable quasi-periodic solution emerging from a secondary Hopf bifurcation. A semi-numerical method is presented to identify the borders of these bistable zones by tracking the motion of the milling tool edges as they might leave the surface of the workpiece during the cutting operation. This requires the tracking of unstable quasi-periodic solutions and the checking of their grazing to a time-periodic switching surface in the infinite-dimensional phase space. As the parameters of the linear structural behaviour of the tool/machine tool system can be obtained by means of standard modal testing, the developed numerical algorithm provides efficient support for the design of milling processes with quick estimates of those parameter domains where chatter can still appear in spite of setting the parameters into linearly stable domains. PMID:26303918

Evapotranspiration Within the Groundwater Model Domain of the Tuba City, Arizona, Disposal Site Interim Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

None, None

The revised groundwater model includes estimates of evapotranspiration (ET). The types of vegetation and the influences of ET on groundwater hydrology vary within the model domain. Some plant species within the model domain, classified as phreatophytes, survive by extracting groundwater. ET within these plant communities can result in a net discharge of groundwater if ET exceeds precipitation. Other upland desert plants within the model domain survive on meteoric water, potentially limiting groundwater recharge if ET is equivalent to precipitation. For all plant communities within the model domain, excessive livestock grazing or other disturbances can tip the balance to a netmore » groundwater recharge. This task characterized and mapped vegetation within the groundwater model domain at the Tuba City, Arizona, Site, and then applied a remote sensing algorithm to estimate ET for each vegetation type. The task was designed to address five objectives: 1. Characterize and delineate different vegetation or ET zones within the groundwater model domain, focusing on the separation of plant communities with phreatophytes that survive by tapping groundwater and upland plant communities that are dependent on precipitation. 2. Refine a remote sensing method, developed to estimate ET at the Monument Valley site, for application at the Tuba City site. 3. Estimate recent seasonal and annual ET for all vegetation zones, separating phreatophytic and upland plant communities within the Tuba City groundwater model domain. 4. For selected vegetation zones, estimate ET that might be achieved given a scenario of limited livestock grazing. 5. Analyze uncertainty of ET estimates for each vegetation zone and for the entire groundwater model domain.« less

Molecular Mechanism of Active Zone Organization at Vertebrate Neuromuscular Junctions

PubMed Central

Nishimune, Hiroshi

2013-01-01

Organization of presynaptic active zones is essential for development, plasticity, and pathology of the nervous system. Recent studies indicate a trans-synaptic molecular mechanism that organizes the active zones by connecting the pre- and the postsynaptic specialization. The presynaptic component of this trans-synaptic mechanism is comprised of cytosolic active zone proteins bound to the cytosolic domains of voltage-dependent calcium channels (P/Q-, N-, and L-type) on the presynaptic membrane. The postsynaptic component of this mechanism is the synapse organizer (laminin β2) that is expressed by the postsynaptic cell and accumulates specifically on top of the postsynaptic specialization. The pre- and the postsynaptic components interact directly between the extracellular domains of calcium channels and laminin β2 to anchor the presynaptic protein complex in front of the postsynaptic specialization. Hence, the presynaptic calcium channel functions as a scaffolding protein for active zone organization and as an ion-conducting channel for synaptic transmission. In contrast to the requirement of calcium influx for synaptic transmission, the formation of the active zone does not require the calcium influx through the calcium channels. Importantly, the active zones of adult synapses are not stable structures and require maintenance for their integrity. Furthermore, aging or diseases of the central and peripheral nervous system impair the active zones. This review will focus on the molecular mechanisms that organize the presynaptic active zones and summarize recent findings at the neuromuscular junctions and other synapses. PMID:22135013

VISUAL PLUMES MIXING ZONE MODELING SOFTWARE

EPA Science Inventory

The U.S. Environmental Protection Agency has a long history of both supporting plume model development and providing mixing zone modeling software. The Visual Plumes model is the most recent addition to the suite of public-domain models available through the EPA-Athens Center f...

Domainal cleavage as an Anisotropic Reaction-diffusion Process

NASA Astrophysics Data System (ADS)

Mulchrone, Kieran; Meere, Patrick

2017-04-01

Domainal cleavage comprises zones dominated by quartz and feldspar (QF-domains) and zones dominated by Mica (M-domains) which form at low metamorphic grades. The protolith is typically fairly homogeneous mudstone, siltstone, sandstone or limestone. Wet diffusion or pressure solution along grain boundaries is a key mechanism in the development of domanial cleavage. However, this does not explain why M-domains become sub-regularly spaced, visually evident in coarser-grained rocks, and take on an anastomising morphology. The ratio of M to QF-domains by volume can range from 1 to 0.1 and lower i.e. in extreme cases M-domains are intermittent but regularly spaced. It is suggested here that an anisotropic reaction-diffusion process model can explain these features. The imposed stress field instantaneously leads to anisotropy of diffusion by narrowing intergranular channels perpendicular to the principal stress. This leads to a preferred diffusion of chemicals parallel to the principal stress direction and lower diffusion rates in the normal direction. Combining this with the chemical reaction of pressure solution produces an anisotropic reaction-diffusion system. Both isotropic and anistropic reaction diffusion systems lead to pattern formation as discovered by Alan Turing on the 1950's as an explanation for patterns found in animal skins such as spots and stripes. Thus domanial cleavage is a striped pattern induced by diffusion anisotropy combined with a chemical reaction. Furthermore, rates of chemical reaction in intergranular fluids is likely to be many orders of magnitude greater that rates of deformation. Therefore we expect domanial cleavage to form relatively rapidly. As deformation progresses the M-domains behave less competently and may be the site of enhanced shearing. An example from Co. Cork, Ireland demonstrates shear folding in low-grade metasedimentary rocks with reverse shear along M-domains at a high angle to the maximum compressive stress.

`Dhara': An Open Framework for Critical Zone Modeling

NASA Astrophysics Data System (ADS)

Le, P. V.; Kumar, P.

2016-12-01

Processes in the Critical Zone, which sustain terrestrial life, are tightly coupled across hydrological, physical, biological, chemical, pedological, geomorphological and ecological domains over both short and long timescales. Observations and quantification of the Earth's surface across these domains using emerging high resolution measurement technologies such as light detection and ranging (lidar) and hyperspectral remote sensing are enabling us to characterize fine scale landscape attributes over large spatial areas. This presents a unique opportunity to develop novel approaches to model the Critical Zone that can capture fine scale intricate dependencies across the different processes in 3D. The development of interdisciplinary tools that transcend individual disciplines and capture new levels of complexity and emergent properties is at the core of Critical Zone science. Here we introduce an open framework for high-performance computing model (`Dhara') for modeling complex processes in the Critical Zone. The framework is designed to be modular in structure with the aim to create uniform and efficient tools to facilitate and leverage process modeling. It also provides flexibility to maintain, collaborate, and co-develop additional components by the scientific community. We show the essential framework that simulates ecohydrologic dynamics, and surface - sub-surface coupling in 3D using hybrid parallel CPU-GPU. We demonstrate that the open framework in Dhara is feasible for detailed, multi-processes, and large-scale modeling of the Critical Zone, which opens up exciting possibilities. We will also present outcomes from a Modeling Summer Institute led by Intensively Managed Critical Zone Observatory (IMLCZO) with representation from several CZOs and international representatives.

A two dimensional finite difference time domain analysis of the quiet zone fields of an anechoic chamber

NASA Technical Reports Server (NTRS)

Ryan, Deirdre A.; Luebbers, Raymond J.; Nguyen, Truong X.; Kunz, Karl S.; Steich, David J.

1992-01-01

Prediction of anechoic chamber performance is a difficult problem. Electromagnetic anechoic chambers exist for a wide range of frequencies but are typically very large when measured in wavelengths. Three dimensional finite difference time domain (FDTD) modeling of anechoic chambers is possible with current computers but at frequencies lower than most chamber design frequencies. However, two dimensional FDTD (2D-FTD) modeling enables much greater detail at higher frequencies and offers significant insight into compact anechoic chamber design and performance. A major subsystem of an anechoic chamber for which computational electromagnetic analyses exist is the reflector. First, an analysis of the quiet zone fields of a low frequency anechoic chamber produced by a uniform source and a reflector in two dimensions using the FDTD method is presented. The 2D-FDTD results are compared with results from a three dimensional corrected physical optics calculation and show good agreement. Next, a directional source is substituted for the uniform radiator. Finally, a two dimensional anechoic chamber geometry, including absorbing materials, is considered, and the 2D-FDTD results for these geometries appear reasonable.

Assessing potential climate change pressures across the conterminous United States: mapping plant hardiness zones, heat zones, growing degree days, and cumulative drought severity throughout this century

Treesearch

Stephen N. Matthews; Louis R. Iverson; Matthew P. Peters; Anantha M. Prasad

2018-01-01

The maps and tables presented here represent potential variability of projected climate change across the conterminous United States during three 30-year periods in this century and emphasizes the importance of evaluating multiple signals of change across large spatial domains. Maps of growing degree days, plant hardiness zones, heat zones, and cumulative drought...

Miocene extension and extensional folding in an anticlinal segment of the Black Mountains accommodation zone, Colorado River extensional corridor, southwestern United States

USGS Publications Warehouse

Varga, R.J.; Faulds, J.E.; Snee, L.W.; Harlan, S.S.; Bettison-Varga, L.

2004-01-01

Recent studies demonstrate that rifts are characterized by linked tilt domains, each containing a consistent polarity of normal faults and stratal tilt directions, and that the transition between domains is typically through formation of accommodation zones and generally not through production of throughgoing transfer faults. The mid-Miocene Black Mountains accommodation zone of southern Nevada and western Arizona is a well-exposed example of an accommodation zone linking two regionally extensive and opposing tilt domains. In the southeastern part of this zone near Kingman, Arizona, east dipping normal faults of the Whipple tilt domain and west dipping normal faults of the Lake Mead domain coalesce across a relatively narrow region characterized by a series of linked, extensional folds. The geometry of these folds in this strike-parallel portion of the accommodation zone is dictated by the geometry of the interdigitating normal faults of opposed polarity. Synclines formed where normal faults of opposite polarity face away from each other whereas anticlines formed where the opposed normal faults face each other. Opposed normal faults with small overlaps produced short folds with axial trends at significant angles to regional strike directions, whereas large fault overlaps produce elongate folds parallel to faults. Analysis of faults shows that the folds are purely extensional and result from east/northeast stretching and fault-related tilting. The structural geometry of this portion of the accommodation zone mirrors that of the Black Mountains accommodation zone more regionally, with both transverse and strike-parallel antithetic segments. Normal faults of both tilt domains lose displacement and terminate within the accommodation zone northwest of Kingman, Arizona. However, isotopic dating of growth sequences and crosscutting relationships show that the initiation of the two fault systems in this area was not entirely synchronous and that west dipping faults of the

The innate immune repertoire in Cnidaria - ancestral complexity and stochastic gene loss

PubMed Central

Miller, David J; Hemmrich, Georg; Ball, Eldon E; Hayward, David C; Khalturin, Konstantin; Funayama, Noriko; Agata, Kiyokazu; Bosch, Thomas CG

2007-01-01

Background Characterization of the innate immune repertoire of extant cnidarians is of both fundamental and applied interest - it not only provides insights into the basic immunological 'tool kit' of the common ancestor of all animals, but is also likely to be important in understanding the global decline of coral reefs that is presently occurring. Recently, whole genome sequences became available for two cnidarians, Hydra magnipapillata and Nematostella vectensis, and large expressed sequence tag (EST) datasets are available for these and for the coral Acropora millepora. Results To better understand the basis of innate immunity in cnidarians, we scanned the available EST and genomic resources for some of the key components of the vertebrate innate immune repertoire, focusing on the Toll/Toll-like receptor (TLR) and complement pathways. A canonical Toll/TLR pathway is present in representatives of the basal cnidarian class Anthozoa, but neither a classic Toll/TLR receptor nor a conventional nuclear factor (NF)-κB could be identified in the anthozoan Hydra. Moreover, the detection of complement C3 and several membrane attack complex/perforin domain (MAC/PF) proteins suggests that a prototypic complement effector pathway may exist in anthozoans, but not in hydrozoans. Together with data for several other gene families, this implies that Hydra may have undergone substantial secondary gene loss during evolution. Such losses are not confined to Hydra, however, and at least one MAC/PF gene appears to have been lost from Nematostella. Conclusion Consideration of these patterns of gene distribution underscores the likely significance of gene loss during animal evolution whilst indicating ancient origins for many components of the vertebrate innate immune system. PMID:17437634

The innate immune repertoire in cnidaria--ancestral complexity and stochastic gene loss.

PubMed

Miller, David J; Hemmrich, Georg; Ball, Eldon E; Hayward, David C; Khalturin, Konstantin; Funayama, Noriko; Agata, Kiyokazu; Bosch, Thomas C G

2007-01-01

Characterization of the innate immune repertoire of extant cnidarians is of both fundamental and applied interest--it not only provides insights into the basic immunological 'tool kit' of the common ancestor of all animals, but is also likely to be important in understanding the global decline of coral reefs that is presently occurring. Recently, whole genome sequences became available for two cnidarians, Hydra magnipapillata and Nematostella vectensis, and large expressed sequence tag (EST) datasets are available for these and for the coral Acropora millepora. To better understand the basis of innate immunity in cnidarians, we scanned the available EST and genomic resources for some of the key components of the vertebrate innate immune repertoire, focusing on the Toll/Toll-like receptor (TLR) and complement pathways. A canonical Toll/TLR pathway is present in representatives of the basal cnidarian class Anthozoa, but neither a classic Toll/TLR receptor nor a conventional nuclear factor (NF)-kappaB could be identified in the anthozoan Hydra. Moreover, the detection of complement C3 and several membrane attack complex/perforin domain (MAC/PF) proteins suggests that a prototypic complement effector pathway may exist in anthozoans, but not in hydrozoans. Together with data for several other gene families, this implies that Hydra may have undergone substantial secondary gene loss during evolution. Such losses are not confined to Hydra, however, and at least one MAC/PF gene appears to have been lost from Nematostella. Consideration of these patterns of gene distribution underscores the likely significance of gene loss during animal evolution whilst indicating ancient origins for many components of the vertebrate innate immune system.

Thermochronometrically constrained anatomy and evolution of a Miocene extensional accommodation zone and tilt domain boundary: The southern Wassuk Range, Nevada

NASA Astrophysics Data System (ADS)

Gorynski, Kyle E.; Stockli, Daniel F.; Douglas Walker, J.

2013-06-01

(AHe) and Zircon (ZHe) (U-Th)/He thermochronometric data from the southern Wassuk Range (WR) coupled with 40Ar/39Ar age data from the overlying tilted Tertiary section are used to constrain the thermal evolution of an extensional accommodation zone and tilt-domain boundary. AHe and ZHe data record two episodes of rapid cooling related to the tectonic exhumation of the WR fault block beginning at ~15 and ~4 Ma. Extension was accommodated through fault-block rotation and variably tilted the southern WR to the west from ~60°-70° in the central WR to ~15°-35° in the southernmost WR and Pine Grove Hills, and minimal tilting in the Anchorite Hills and along the Mina Deflection to the south. Middle Miocene geothermal gradient estimates record heating immediately prior to large-magnitude extension that was likely coeval with the extrusion of the Lincoln Flat andesite at ~14.8 Ma. Geothermal gradients increase from ~19° ± 4°C/km to ≥ 65° ± 20°C/km toward the Mina Deflection, suggesting that it was the focus of Middle Miocene arc magmatism in the upper crust. The decreasing thickness of tilt blocks toward the south resulted from a shallowing brittle/ductile transition zone. Postmagmatic Middle Miocene extension and fault-block advection were focused in the northern and central WR and coincidentally moderated the large lateral thermal gradient within the uppermost crust.

Functional and topological characteristics of mammalian regulatory domains

PubMed Central

Symmons, Orsolya; Uslu, Veli Vural; Tsujimura, Taro; Ruf, Sandra; Nassari, Sonya; Schwarzer, Wibke; Ettwiller, Laurence; Spitz, François

2014-01-01

Long-range regulatory interactions play an important role in shaping gene-expression programs. However, the genomic features that organize these activities are still poorly characterized. We conducted a large operational analysis to chart the distribution of gene regulatory activities along the mouse genome, using hundreds of insertions of a regulatory sensor. We found that enhancers distribute their activities along broad regions and not in a gene-centric manner, defining large regulatory domains. Remarkably, these domains correlate strongly with the recently described TADs, which partition the genome into distinct self-interacting blocks. Different features, including specific repeats and CTCF-binding sites, correlate with the transition zones separating regulatory domains, and may help to further organize promiscuously distributed regulatory influences within large domains. These findings support a model of genomic organization where TADs confine regulatory activities to specific but large regulatory domains, contributing to the establishment of specific gene expression profiles. PMID:24398455

Implications of new gravity data for Baikal Rift zone structure

NASA Technical Reports Server (NTRS)

Ruppel, C.; Kogan, M. G.; Mcnutt, M. K.

1993-01-01

Newly available, 2D Bouguer gravity anomaly data from the Baikal Rift zone, Siberia, indicate that this discrete, intracontinental rift system is regionally compensated by an elastic plate about 50 km thick. However, spectral and spatial domain analyses and isostatic anomaly calculations show that simple elastic plate theory does not offer an adequate explanation for compensation in the rift zone, probably because of significant lateral variations in plate strength and the presence of subsurface loads. Our results and other geophysical observations support the interpretation that the Baikal Rift zone is colder than either the East African or Rio Grande rift.

Textural evolution of plagioclase feldspar across a shear zone: Implications for deformation mechanism and rock strength

NASA Astrophysics Data System (ADS)

Putnis, Andrew; Austrheim, Håkon; Mukai, Hiroki; Putnis, Christine V.

2014-05-01

Caledonian amphibolite facies shear zones developed in granulite facies anorthosites and anorthositic gabbros of the Bergen Arcs, western Norway allow a detailed study of the relationships between fluid-infiltration, mineral reactions, the evolution of microstructure and deformation mechanisms. A sequence of rocks from the relatively pristine granulites into a shear zone has been studied by optical microscopy, EMPA, SEM, EBSD and TEM, focusing on the progressive development of microstructure in the plagioclase feldspars, leading up to their deformation in the shear zone. At the outcrop scale, fluid infiltration into the granulites is marked by a distinct colour change in the plagioclase from lilac/brown to white. This is associated with the breakdown of the intermediate composition plagioclase (~An50) in the granulite to a complex intergrowth of Na-rich and Ca-rich domains. EBSD analysis shows that this intergrowth retains the crystallographic orientation of the parent feldspar, but that the Ca-rich domains contain many low-angle boundaries as well as twin-related domains. Within the shear zone, this complex intergrowth coarsens by grain boundary migration, annihilating grain boundaries but retaining the Na-rich and Ca-rich zoning pattern. Analysis of nearest-neighbour misorientations of feldspar grains in the shear zone demonstrates that local crystallographic preferred orientation (CPO) is inherited from the parent granulite grain orientations. Random pair misorientation angle distributions show that there is no CPO in the shear zone as a whole, nor is there significant shape preferred orientation (SPO) in individual grains. These observations are interpreted in terms of fluid-induced weakening and deformation by dissolution-precipitation (pressure solution) creep.

Kinematics of the Torcal Shear Zone: transpressional tectonics shaping orogenic curves in the northern Gibraltar Arc.

NASA Astrophysics Data System (ADS)

Barcos, Leticia; Balanyá, Juan Carlos; Díaz-Azpiroz, Manuel; Expósito, Inmaculada; Jiménez-Bonilla, Alejandro

2014-05-01

Structural trend line patterns of orogenic arcs depict diverse geometries resulting from multiple factors such as indenter geometry, thickness of pre-deformational sequences and rheology of major decollement surfaces. Within them, salient-recess transitions often result in transpressive deformation bands. The Gibraltar Arc results from the Neogene collision of a composite metamorphic terrane (Alboran Domain, acting as a relative backstop) against two foreland margins (Southiberian and Maghrebian Domains). Within it, the Western Gibraltar Arc (WGA) is a protruded salient, 200 km in length cord, closely coinciding with the apex zone of the major arc. The WGA terminates at two transpressional zones. The main structure in the northern (Betic) end zone is a 70 km long and 4-5 km wide brittle deformation band, the so-called Torcal Shear Zone (TSZ). The TSZ forms a W-E topographic alignment along which the kinematic data show an overall dextral transpression. Within the TSZ strain is highly partitioned into mainly shortening, extensional and strike-slip structures. The strain partitioning is heterogeneous along the band and, accordingly, four distinct sectors can be identified. i) The Peñarrubia-Almargen Transverse Zone (PATZ), located at the W-end of the TSZ presents WNW-ESE folds and dextral faults, together with normal faults that accommodate extension parallel to the dominant structural trend. WNW ESE dextral faults might be related with synthetic splays at the lateral end of the TSZ. ii) The Sierra del Valle de Abdalajís (SVA) is characterized by WSW-ENE trending folds and dextral-reverse faults dipping to SSE, and NW-SE normal faults. The southern boundary of the SVA is a dextral fault zone. iii) The Torcal de Antequera Massif (TAM) presents two types of structural domains. Two outer domains located at both margins characterized by E-W trending, dextral strike-slip structures, and an inner domain, characterized by en echelon SE-vergent open folds and reverse shear

Prediction of subsurface fracture in mining zone of Papua using passive seismic tomography based on Fresnel zone

DOE Office of Scientific and Technical Information (OSTI.GOV)

Setiadi, Herlan; Nurhandoko, Bagus Endar B.; Wely, Woen

Fracture prediction in a block cave of underground mine is very important to monitor the structure of the fracture that can be harmful to the mining activities. Many methods can be used to obtain such information, such as TDR (Time Domain Relectometry) and open hole. Both of them have limitations in range measurement. Passive seismic tomography is one of the subsurface imaging method. It has advantage in terms of measurements, cost, and rich of rock physical information. This passive seismic tomography studies using Fresnel zone to model the wavepath by using frequency parameter. Fresnel zone was developed by Nurhandoko inmore » 2000. The result of this study is tomography of P and S wave velocity which can predict position of fracture. The study also attempted to use sum of the wavefronts to obtain position and time of seismic event occurence. Fresnel zone tomography and the summation wavefront can predict location of geological structure of mine area as well.« less

Applications of ISES for coastal zone studies

NASA Technical Reports Server (NTRS)

Bartlett, D. S.

1990-01-01

In contrast to the discipline- and process-oriented topics addressed, coastal zone studies are defined geographically by the special circumstances inherent in the interface between land and water. The characteristics of coastal zones which make them worthy of separate consideration are: (1) the dynamic nature of natural and anthropogenic processes taking place; (2) the relatively restricted spatial domain of the narrow land/water interface; and (3) the large proportion of the Earth's population living within coastal zones, and the resulting extreme pressure on natural and human resources. These characteristics place special constraints and priorities on remote sensing applications, even though the applications themselves bear close relation to those addressed by other elements of this report (e.g., oceans, ice, vegetation/land use). The discussion which follows first describes the suite of remote sensing activities relevant to coastal zone studies. Potential Information Sciences Experiment System (ISES) experiments will then be addressed within two general categories: applications of real-time data transmission and applications of onboard data acquisition and processing.

Spatial evolution of Zagros collision zone in Kurdistan - NW Iran, constraints for Arabia-Eurasia oblique convergence

NASA Astrophysics Data System (ADS)

Sadeghi, S.; Yassaghi, A.

2015-09-01

Stratigraphy, detailed structural mapping and crustal scale cross section of the NW Zagros collision zone evolved during convergence of the Arabian and Eurasian plates were conducted to constrain the spatial evolution of the belt oblique convergence since Late Cretaceous. Zagros orogeny in NW Iran consists of the Sanandaj-Sirjan, Gaveh Rud and ophiolite zones as internal, and Bisotoun, Radiolarite and High Zagros zones as external parts. The Main Zagros Thrust is known as major structures of the Zagros suture zone. Two stages of deformation are recognized in the external parts of Zagros. In the early stage, presence of dextrally deformed domains beside the reversely deformed domains in the Radiolarite zone as well as dextral-reverse faults in both Bisotoun and Radiolarite zones demonstrates partitioning of the dextral transpression. In the late stage, southeastward propagation of the Zagros orogeny towards its foreland resulted in synchronous development of orogen-parallel strike-slip and pure thrust faults. It is proposed that the first stage related to the late Cretaceous oblique obduction, and the second stage is resulted from Cenozoic collision. Cenozoic orogen-parallel strike-slip component of Zagros oblique faulting is not confined to the Zagros suture zone (Main Recent) but also occurred in the more external part (Marekhil-Ravansar fault system). Thus, it is proposed that oblique convergence of Arabia-Eurasia plates occurred in Zagros collision zone since the Late Cretaceous.

Linear optical pulse compression based on temporal zone plates.

PubMed

Li, Bo; Li, Ming; Lou, Shuqin; Azaña, José

2013-07-15

We propose and demonstrate time-domain equivalents of spatial zone plates, namely temporal zone plates, as alternatives to conventional time lenses. Both temporal intensity zone plates, based on intensity-only temporal modulation, and temporal phase zone plates, based on phase-only temporal modulation, are introduced and studied. Temporal zone plates do not exhibit the limiting tradeoff between temporal aperture and frequency bandwidth (temporal resolution) of conventional linear time lenses. As a result, these zone plates can be ideally designed to offer a time-bandwidth product (TBP) as large as desired, practically limited by the achievable temporal modulation bandwidth (limiting the temporal resolution) and the amount of dispersion needed in the target processing systems (limiting the temporal aperture). We numerically and experimentally demonstrate linear optical pulse compression by using temporal zone plates based on linear electro-optic temporal modulation followed by fiber-optics dispersion. In the pulse-compression experiment based on temporal phase zone plates, we achieve a resolution of ~25.5 ps over a temporal aperture of ~5.77 ns, representing an experimental TBP larger than 226 using a phase-modulation amplitude of only ~0.8π rad. We also numerically study the potential of these devices to achieve temporal imaging of optical waveforms and present a comparative analysis on the performance of different temporal intensity and phase zone plates.

Quantifying Preferential Flow and Seasonal Storage in an Unsaturated Fracture-Facial Domain

NASA Astrophysics Data System (ADS)

Nimmo, J. R.; Malek-Mohammadi, S.

2012-12-01

Preferential flow through deep unsaturated zones of fractured rock is hydrologically important to a variety of contaminant transport and water-resource issues. The unsaturated zone of the English Chalk Aquifer provides an important opportunity for a case study of unsaturated preferential flow in isolation from other flow modes. The chalk matrix has low hydraulic conductivity and stays saturated, owing to its fine uniform pores and the wet climate of the region. Therefore the substantial fluxes observed in the unsaturated chalk must be within fractures and interact minimally with matrix material. Price et al. [2000] showed that irregularities on fracture surfaces provide a significant storage capacity in the chalk unsaturated zone, likely accounting for volumes of water required to explain unexpected dry-season water-table stability during substantial continuing streamflow observed by Lewis et al. [1993] In this presentation we discuss and quantify the dynamics of replenishment and drainage of this unsaturated zone fracture-face storage domain using a modification of the source-responsive model of Nimmo [2010]. This model explains the processes in terms of two interacting flow regimes: a film or rivulet preferential flow regime on rough fracture faces, active on an individual-storm timescale, and a regime of adsorptive and surface-tension influences, resembling traditional diffuse formulations of unsaturated flow, effective mainly on a seasonal timescale. The modified model identifies hydraulic parameters for an unsaturated fracture-facial domain lining the fractures. Besides helping to quantify the unsaturated zone storage described by Price et al., these results highlight the importance of research on the topic of unsaturated-flow relations within a near-fracture-surface domain. This model can also facilitate understanding of mechanisms for reinitiation of preferential flow after temporary cessation, which is important in multi-year preferential flow through deep

Analogue modelling of inclined, brittle-ductile transpression: Testing analytical models through natural shear zones (external Betics)

NASA Astrophysics Data System (ADS)

Barcos, L.; Díaz-Azpiroz, M.; Balanyá, J. C.; Expósito, I.; Jiménez-Bonilla, A.; Faccenna, C.

2016-07-01

The combination of analytical and analogue models gives new opportunities to better understand the kinematic parameters controlling the evolution of transpression zones. In this work, we carried out a set of analogue models using the kinematic parameters of transpressional deformation obtained by applying a general triclinic transpression analytical model to a tabular-shaped shear zone in the external Betic Chain (Torcal de Antequera massif). According to the results of the analytical model, we used two oblique convergence angles to reproduce the main structural and kinematic features of structural domains observed within the Torcal de Antequera massif (α = 15° for the outer domains and α = 30° for the inner domain). Two parallel inclined backstops (one fixed and the other mobile) reproduce the geometry of the shear zone walls of the natural case. Additionally, we applied digital particle image velocimetry (PIV) method to calculate the velocity field of the incremental deformation. Our results suggest that the spatial distribution of the main structures observed in the Torcal de Antequera massif reflects different modes of strain partitioning and strain localization between two domain types, which are related to the variation in the oblique convergence angle and the presence of steep planar velocity - and rheological - discontinuities (the shear zone walls in the natural case). In the 15° model, strain partitioning is simple and strain localization is high: a single narrow shear zone is developed close and parallel to the fixed backstop, bounded by strike-slip faults and internally deformed by R and P shears. In the 30° model, strain partitioning is strong, generating regularly spaced oblique-to-the backstops thrusts and strike-slip faults. At final stages of the 30° experiment, deformation affects the entire model box. Our results show that the application of analytical modelling to natural transpressive zones related to upper crustal deformation

Linking Plagioclase Zoning Patterns to Active Magma Processes

NASA Astrophysics Data System (ADS)

Izbekov, P. E.; Nicolaysen, K. P.; Neill, O. K.; Shcherbakov, V.; Eichelberger, J. C.; Plechov, P.

2016-12-01

Plagioclase, one of the most common and abundant mineral phases in volcanic products, will vary in composition in response to changes in temperature, pressure, composition of the ambient silicate melt, and melt H2O concentration. Changes in these parameters may cause dissolution or growth of plagioclase crystals, forming characteristic textural and compositional variations (zoning patterns), the complete core-to-rim sequence of which describes events experienced by an individual crystal from its nucleation to the last moments of its growth. Plagioclase crystals in a typical volcanic rock may look drastically dissimilar despite their spatial proximity and the fact that they have erupted together. Although they shared last moments of their growth during magma ascent and eruption, their prior experiences could be very different, as plagioclase crystals often come from different domains of the same magma system. Distinguishing similar zoning patterns, correlating them across the entire population of plagioclase crystals, and linking these patterns to specific perturbations in the magmatic system may provide additional perspective on the variety, extent, and timing of magma processes at active volcanic systems. Examples of magma processes, which may be distinguished based on plagioclase zoning patterns, include (1) cooling due to heat loss, (2) heating and/or pressure build up due to an input of new magmatic material, (3) pressure drop in response to magma system depressurization, and (4) crystal transfer between different magma domains/bodies. This review will include contrasting examples of zoning patters from recent eruptions of Augustine and Cleveland Volcanoes in Alaska, Sakurajima Volcano in Japan, Karymsky, Bezymianny, and Tolbachik Volcanoes in Kamchatka, as well as from the drilling into an active magma body at Krafla, Iceland.

Linking Plagioclase Zoning Patterns to Active Magma Processes

NASA Astrophysics Data System (ADS)

Izbekov, P. E.; Nicolaysen, K. P.; Neill, O. K.; Shcherbakov, V.; Plechov, P.; Eichelberger, J. C.

2015-12-01

Plagioclase, one of the most common and abundant mineral phases in volcanic products, will vary in composition in response to changes in temperature, pressure, composition of the ambient silicate melt, and melt H2O concentration. Changes in these parameters may cause dissolution or growth of plagioclase crystals, forming characteristic textural and compositional variations (zoning patterns), the complete core-to-rim sequence of which describes events experienced by an individual crystal from its nucleation to the last moments of its growth. Plagioclase crystals in a typical volcanic rock may look drastically dissimilar despite their spatial proximity and the fact that they have erupted together. Although they shared last moments of their growth during magma ascent and eruption, their prior experiences could be very different, as plagioclase crystals often come from different domains of the same magma system. Distinguishing similar zoning patterns, correlating them across the entire population of plagioclase crystals, and linking these patterns to specific perturbations in the magmatic system may provide additional perspective on the variety, extent, and timing of magma processes at active volcanic systems. Examples of magma processes, which may be distinguished based on plagioclase zoning patterns, include (1) cooling due to heat loss, (2) heating and/or pressure build up due to an input of new magmatic material, (3) pressure drop in response to magma system depressurization, and (4) crystal transfer between different magma domains/bodies. This review will include contrasting examples of zoning patters from recent eruptions of Karymsky, Bezymianny, and Tolbachik Volcanoes in Kamchatka, Augustine and Cleveland Volcanoes in Alaska, as well as from the drilling into an active magma body at Krafla, Iceland.

Focal mechanism and stress analyses for main tectonic zones in Albania

NASA Astrophysics Data System (ADS)

Dushi, Edmond; Koçi, Rexhep; Begu, Enkela; Bozo, Rrezart

2017-04-01

In this study, a number of 33 moderate earthquakes for the period 2013-2015, ranging in magnitude within 2.2 ≤ MW ≤ 4.9 and located within the Albanian territory, have been analyzed. As an earthquake prone country, situated at the frontal collision boundary between Adria microplate and Eurasian tectonic plate, Albania is characterized frequently by micro earthquakes, many moderate and seldom by strong ones. It is evidenced that the whole territory is divided in two different tectonic domains, correspondingly the outer and the inner domain, showing different stress regime as clearly evidenced based on earthquake focal mechanism and geodetic studies. Although strong earthquakes are clearly related to faults in tectonically active areas, moderate events are more frequent revealing valuable information on this purpose. All the studied events are selected to be well-recorded by a maximum possible number of the local broadband (BB) seismological stations of Albanian Seismological Network (ASN), although regional stations have been used as well to constrain the solution. Earthquakes are grouped according to their location, within three well-defined tectonic zones, namely: Adriatic-Ionian (AI), Lushnja-Elbasani-Dibra (LED) and Ohrid-Korça (OK). For each event, the seismic moment M0is determined, through spectral analyses. Moment values vary ranging 1012 - 1015 Nm, for the Adriatic-Ionian (AI) outer zone; 1013 - 1016 Nm, for the Lushnja-Elbasani-Dibra (LED) transversal zone, which cuts through both the outer and the inner domains and 1012 - 1014 Nm, for the Ohrid-Korça (OK), north-south trending inner zone. Focal mechanism solutions (FMS) have been determined for each earthquake, based on the robust first motion polarities method, as applied in the FOCMEC (Seisan 10.1) routine. Using the Michael's linear bootstrap invertion on FMS, a stress analysis is applied. Results show the minimum compressional stress directions variation: σ1 370/270, σ23030/80 and σ31980

3D Numerical modelling of topography development associated with curved subduction zones

NASA Astrophysics Data System (ADS)

Munch, Jessica; Ueda, Kosuke; Burg, Jean-Pierre; May, Dave; Gerya, Taras

2017-04-01

Curved subduction zones, also called oroclines, are geological features found in various places on Earth. They occur in diverse geodynamic settings: 1) single slab subduction in oceanic domain (e.g. Sandwich trench in the Southern Atlantic); 2) single slab subduction in continental domain, (e.g. Gibraltar-Alboran orocline in the Western Mediterranean) 3); multi-slab subduction (e.g. Caribbean orocline in the South-East of the Gulf of Mexico). These systems present various curvatures, lengths (few hundreds to thousands of km) and ages (less than 35 Ma for Gibraltar Alboran orocline, up to 100 Ma for the Caribbean). Recent studies suggested that the formation of curved subduction systems depends on slab properties (age, length, etc) and may be linked with processes such as retreating subduction and delamination. Plume induced subduction initiation has been proposed for the Caribbean. All of these processes involve deep mechanisms such as mantle and slab dynamics. However, subduction zones always generate topography (trenches, uplifts, etc), which is likely to be influenced by surface processes. Hence, surface processes may also influence the evolution of subduction zones. We focus on different kinds of subduction systems initiated by plume-lithosphere interactions (single slab subduction/multi-slab subduction) and scrutinize their surface expression. We use numerical modeling to examine large-scale subduction initiation and three-dimensional slab retreat. We perform two kinds of simulations: 1) large scale subduction initiation with the 3D-thermomechanical code I3ELVIS (Gerya and Yuen, 2007) in an oceanic domain and 2) large scale subduction initiation in oceanic domain using I3ELVIS coupled with a robust new surface processes model (SPM). One to several retreating slabs form in the absence of surface processes, when the conditions for subduction initiation are reached (c.f. Gerya et al., 2015), and ridges occur in the middle of the extensional domain opened by slab

A reworked Lake Zone margin: Chronological and geochemical constraints from the Ordovician arc-related basement of the Hovd Zone (western Mongolia)

NASA Astrophysics Data System (ADS)

Soejono, Igor; Buriánek, David; Janoušek, Vojtěch; Svojtka, Martin; Čáp, Pavel; Erban, Vojtěch; Ganpurev, Nyamtsetseg

2017-12-01

The primary relationships and character of the boundaries between principal lithotectonic domains in the Mongolian tract of the Central Asian Orogenic Belt (CAOB) are still poorly constrained. This brings much uncertainty in understanding of the orogeny configuration and the complete accretionary history. The plutonic Khuurai Tsenkher Gol Complex and the mainly metasedimentary Bij Group represent associated medium- to high-grade basement complexes exposed in the Hovd Zone close to its boundary with the Lake Zone in western Mongolia. The Khuurai Tsenkher Gol Complex is composed of variously deformed acid to basic magmatic rocks intimately associated with the metamorphosed sedimentary and volcanic rocks of the Bij Group. Results of our field work, new U-Pb zircon ages and whole-rock geochemical data suggest an existence of two separate magmatic events within the evolution of the Khuurai Tsenkher Gol Complex. Early to Mid-Ordovician (476 ± 5 Ma and 467 ± 4 Ma protoliths) normal- to high-K calc-alkaline orthogneisses, metadiorites and metagabbros predominate over Mid-Silurian (430 ± 3 Ma) tholeiitic-mildly alkaline quartz monzodiorites. Whereas the geochemical signature of the former suite unequivocally demonstrates its magmatic-arc origin, that of the latter quartz monzodiorite suggests an intra-plate setting. As shown by Sr-Nd isotopic data, the older arc-related magmas were derived from depleted mantle and/or were generated by partial melting of juvenile metabasic crust. Detrital zircon age populations of the metasedimentary rocks together with geochemical signatures of the associated amphibolites imply that the Bij Group was a volcano-sedimentary sequence, formed probably in the associated fore-arc wedge basin. Moreover, our data argue for an identical provenance of the Altai and Hovd domains, overall westward sediment transport during the Early Palaeozoic and the east-dipping subduction polarity. The obvious similarities of the Khuurai Tsenkher Gol Complex

Magnetotelluric Imaging of the Lithosphere Across the Variscan Orogen (Iberian Autochthonous Domain, NW Iberia)

NASA Astrophysics Data System (ADS)

Alves Ribeiro, J.; Monteiro-Santos, F. A.; Pereira, M. F.; Díez Fernández, R.; Dias da Silva, Í.; Nascimento, C.; Silva, J. B.

2017-12-01

A new magnetotelluric (MT) survey comprising 17 MT soundings throughout a 30 km long N30°W transect in the Iberian autochthons domain of NW Iberia (Central Iberian Zone) is presented. The 2-D inversion model shows the resistivity structure of the continental crust up to 10 km depth, heretofore unavailable for this region of the Variscan Orogen. The MT model reveals a wavy structure separating a conductive upper layer underlain by a resistive layer, thus picturing the two main tectonic blocks of a large-scale D2 extensional shear zone (i.e., Pinhel shear zone). The upper layer represents a lower grade metamorphic domain that includes graphite-rich rocks. The lower layer consists of high-grade metamorphic rocks that experienced partial melting and are associated with granites (more resistive) emplaced during crustal thinning. The wavy structure is the result of superimposed crustal shortening responsible for the development of large-scale D3 folds (e.g., Marofa synform), later deflected and refolded by a D4 strike-slip shear zone (i.e., Juzbado-Penalva do Castelo shear zone). The later contribution to the final structure of the crust is marked by the intrusion of postkinematic granitic rocks and the propagation of steeply dipping brittle fault zones. Our study demonstrates that MT imaging is a powerful tool to understand complex crustal structures of ancient orogens in order to design future prospecting surveys for mineral deposits of economic interest.

Geomorphic domains and linear features on Landsat images, Circle Quadrangle, Alaska

USGS Publications Warehouse

Simpson, S.L.

1984-01-01

A remote sensing study using Landsat images was undertaken as part of the Alaska Mineral Resource Assessment Program (AMRAP). Geomorphic domains A and B, identified on enhanced Landsat images, divide Circle quadrangle south of Tintina fault zone into two regional areas having major differences in surface characteristics. Domain A is a roughly rectangular, northeast-trending area of relatively low relief and simple, widely spaced drainages, except where igneous rocks are exposed. In contrast, domain B, which bounds two sides of domain A, is more intricately dissected showing abrupt changes in slope and relatively high relief. The northwestern part of geomorphic domain A includes a previously mapped tectonostratigraphic terrane. The southeastern boundary of domain A occurs entirely within the adjoining tectonostratigraphic terrane. The sharp geomorphic contrast along the southeastern boundary of domain A and the existence of known faults along this boundary suggest that the southeastern part of domain A may be a subdivision of the adjoining terrane. Detailed field studies would be necessary to determine the characteristics of the subdivision. Domain B appears to be divisible into large areas of different geomorphic terrains by east-northeast-trending curvilinear lines drawn on Landsat images. Segments of two of these lines correlate with parts of boundaries of mapped tectonostratigraphic terranes. On Landsat images prominent north-trending lineaments together with the curvilinear lines form a large-scale regional pattern that is transected by mapped north-northeast-trending high-angle faults. The lineaments indicate possible lithlogic variations and/or structural boundaries. A statistical strike-frequency analysis of the linear features data for Circle quadrangle shows that northeast-trending linear features predominate throughout, and that most northwest-trending linear features are found south of Tintina fault zone. A major trend interval of N.64-72E. in the linear

De novo identification of replication-timing domains in the human genome by deep learning.

PubMed

Liu, Feng; Ren, Chao; Li, Hao; Zhou, Pingkun; Bo, Xiaochen; Shu, Wenjie

2016-03-01

The de novo identification of the initiation and termination zones-regions that replicate earlier or later than their upstream and downstream neighbours, respectively-remains a key challenge in DNA replication. Building on advances in deep learning, we developed a novel hybrid architecture combining a pre-trained, deep neural network and a hidden Markov model (DNN-HMM) for the de novo identification of replication domains using replication timing profiles. Our results demonstrate that DNN-HMM can significantly outperform strong, discriminatively trained Gaussian mixture model-HMM (GMM-HMM) systems and other six reported methods that can be applied to this challenge. We applied our trained DNN-HMM to identify distinct replication domain types, namely the early replication domain (ERD), the down transition zone (DTZ), the late replication domain (LRD) and the up transition zone (UTZ), using newly replicated DNA sequencing (Repli-Seq) data across 15 human cells. A subsequent integrative analysis revealed that these replication domains harbour unique genomic and epigenetic patterns, transcriptional activity and higher-order chromosomal structure. Our findings support the 'replication-domain' model, which states (1) that ERDs and LRDs, connected by UTZs and DTZs, are spatially compartmentalized structural and functional units of higher-order chromosomal structure, (2) that the adjacent DTZ-UTZ pairs form chromatin loops and (3) that intra-interactions within ERDs and LRDs tend to be short-range and long-range, respectively. Our model reveals an important chromatin organizational principle of the human genome and represents a critical step towards understanding the mechanisms regulating replication timing. Our DNN-HMM method and three additional algorithms can be freely accessed at https://github.com/wenjiegroup/DNN-HMM The replication domain regions identified in this study are available in GEO under the accession ID GSE53984. shuwj@bmi.ac.cn or boxc

Phase Domain Walls in Weakly Nonlinear Deep Water Surface Gravity Waves.

PubMed

Tsitoura, F; Gietz, U; Chabchoub, A; Hoffmann, N

2018-06-01

We report a theoretical derivation, an experimental observation and a numerical validation of nonlinear phase domain walls in weakly nonlinear deep water surface gravity waves. The domain walls presented are connecting homogeneous zones of weakly nonlinear plane Stokes waves of identical amplitude and wave vector but differences in phase. By exploiting symmetry transformations within the framework of the nonlinear Schrödinger equation we demonstrate the existence of exact analytical solutions representing such domain walls in the weakly nonlinear limit. The walls are in general oblique to the direction of the wave vector and stationary in moving reference frames. Experimental and numerical studies confirm and visualize the findings. Our present results demonstrate that nonlinear domain walls do exist in the weakly nonlinear regime of general systems exhibiting dispersive waves.

Phase Domain Walls in Weakly Nonlinear Deep Water Surface Gravity Waves

NASA Astrophysics Data System (ADS)

Tsitoura, F.; Gietz, U.; Chabchoub, A.; Hoffmann, N.

2018-06-01

We report a theoretical derivation, an experimental observation and a numerical validation of nonlinear phase domain walls in weakly nonlinear deep water surface gravity waves. The domain walls presented are connecting homogeneous zones of weakly nonlinear plane Stokes waves of identical amplitude and wave vector but differences in phase. By exploiting symmetry transformations within the framework of the nonlinear Schrödinger equation we demonstrate the existence of exact analytical solutions representing such domain walls in the weakly nonlinear limit. The walls are in general oblique to the direction of the wave vector and stationary in moving reference frames. Experimental and numerical studies confirm and visualize the findings. Our present results demonstrate that nonlinear domain walls do exist in the weakly nonlinear regime of general systems exhibiting dispersive waves.

Description of algorithms for processing Coastal Zone Color Scanner (CZCS) data

NASA Technical Reports Server (NTRS)

Zion, P. M.

1983-01-01

The algorithms for processing coastal zone color scanner (CZCS) data to geophysical units (pigment concentration) are described. Current public domain information for processing these data is summarized. Calibration, atmospheric correction, and bio-optical algorithms are presented. Three CZCS data processing implementations are compared.

Ocean Profile Measurements During the Seasonal Ice Zone Reconnaissance Surveys Ocean Profiles

DTIC Science & Technology

2017-01-01

repeated ocean, ice, and atmospheric measurements across the Beaufort-Chukchi sea seasonal sea ice zone (SIZ) utilizing US Coast Guard Arctic Domain...contributing to the rapid decline in summer ice extent that has occurred in recent years. The SIZ is the region between maximum winter sea ice extent and...minimum summer sea ice extent. As such, it contains the full range of positions of the marginal ice zone (MIZ) where sea ice interacts with open water

Model Package Report: Central Plateau Vadose Zone Geoframework Version 1.0

DOE Office of Scientific and Technical Information (OSTI.GOV)

Springer, Sarah D.

The purpose of the Central Plateau Vadose Zone (CPVZ) Geoframework model (GFM) is to provide a reasonable, consistent, and defensible three-dimensional (3D) representation of the vadose zone beneath the Central Plateau at the Hanford Site to support the Composite Analysis (CA) vadose zone contaminant fate and transport models. The GFM is a 3D representation of the subsurface geologic structure. From this 3D geologic model, exported results in the form of point, surface, and/or volumes are used as inputs to populate and assemble the various numerical model architectures, providing a 3D-layered grid that is consistent with the GFM. The objective ofmore » this report is to define the process used to produce a hydrostratigraphic model for the vadose zone beneath the Hanford Site Central Plateau and the corresponding CA domain.« less

Locking of the Chile subduction zone controlled by fluid pressure before the 2010 earthquake

NASA Astrophysics Data System (ADS)

Moreno, Marcos; Haberland, Christian; Oncken, Onno; Rietbrock, Andreas; Angiboust, Samuel; Heidbach, Oliver

2014-04-01

Constraints on the potential size and recurrence time of strong subduction-zone earthquakes come from the degree of locking between the down-going and overriding plates, in the period between large earthquakes. In many cases, this interseismic locking degree correlates with slip during large earthquakes or is attributed to variations in fluid content at the plate interface. Here we use geodetic and seismological data to explore the links between pore-fluid pressure and locking patterns at the subduction interface ruptured during the magnitude 8.8 Chile earthquake in 2010. High-resolution three-dimensional seismic tomography reveals variations in the ratio of seismic P- to S-wave velocities (Vp/Vs) along the length of the subduction-zone interface. High Vp/Vs domains, interpreted as zones of elevated pore-fluid pressure, correlate spatially with parts of the plate interface that are poorly locked and slip aseismically. In contrast, low Vp/Vs domains, interpreted as zones of lower pore-fluid pressure, correlate with locked parts of the plate interface, where unstable slip and earthquakes occur. Variations in pore-fluid pressure are caused by the subduction and dehydration of a hydrothermally altered oceanic fracture zone. We conclude that variations in pore-fluid pressure at the plate interface control the degree of interseismic locking and therefore the slip distribution of large earthquake ruptures.

The Pinto shear zone; a Laramide synconvergent extensional shear zone in the Mojave Desert region of the southwestern United States

USGS Publications Warehouse

Wells, M.L.; Beyene, M.A.; Spell, T.L.; Kula, J.L.; Miller, D.M.; Zanetti, K.A.

2005-01-01

The Pinto shear zone is one of several Late Cretaceous shear zones within the eastern fringe of the Mesozoic magmatic arc of the southwest Cordilleran orogen that developed synchronous with continued plate convergence and backarc shortening. We demonstrate an extensional origin for the shear zone by describing the shear-zone geometry and kinematics, hanging wall deformation style, progressive changes in deformation temperature, and differences in hanging wall and footwall thermal histories. Deformation is constrained between ???74 and 68 Ma by 40Ar/39Ar thermochronology of the exhumed footwall, including multi-diffusion domain modeling of K-feldspar. We discount the interpretations, applied in other areas of the Mojave Desert region, that widespread Late Cretaceous cooling results from refrigeration due to subduction of a shallowly dipping Laramide slab or to erosional denudation, and suggest alternatively that post-intrusion cooling and exhumation by extensional structures are recorded. Widespread crustal melting and magmatism followed by extension and cooling in the Late Cretaceous are most consistent with production of a low-viscosity lower crust during anatexis and/or delamination of mantle lithosphere at the onset of Laramide shallow subduction. ?? 2005 Elsevier Ltd. All rights reserved.

From the chromatin interaction network to the organization of the human genome into replication N/U-domains

NASA Astrophysics Data System (ADS)

Boulos, Rasha E.; Julienne, Hanna; Baker, Antoine; Chen, Chun-Long; Petryk, Nataliya; Kahli, Malik; dʼAubenton-Carafa, Yves; Goldar, Arach; Jensen, Pablo; Hyrien, Olivier; Thermes, Claude; Arneodo, Alain; Audit, Benjamin

2014-11-01

The three-dimensional (3D) architecture of the mammalian nucleus is now being unraveled thanks to the recent development of chromatin conformation capture (3C) technologies. Here we report the results of a combined multiscale analysis of genome-wide mean replication timing and chromatin conformation data that reveal some intimate relationships between chromatin folding and human DNA replication. We previously described megabase replication N/U-domains as mammalian multiorigin replication units, and showed that their borders are ‘master’ replication initiation zones that likely initiate cascades of origin firing responsible for the stereotypic replication of these domains. Here, we demonstrate that replication N/U-domains correspond to the structural domains of self-interacting chromatin, and that their borders act as insulating regions both in high-throughput 3C (Hi-C) data and high-resolution 3C (4C) experiments. Further analyses of Hi-C data using a graph-theoretical approach reveal that N/U-domain borders are long-distance, interconnected hubs of the chromatin interaction network. Overall, these results and the observation that a well-defined ordering of chromatin states exists from N/U-domain borders to centers suggest that ‘master’ replication initiation zones are at the heart of a high-order, epigenetically controlled 3D organization of the human genome.

Quantal concept of T-cell activation: adhesion domains as immunological synapses

NASA Astrophysics Data System (ADS)

Sackmann, Erich

2011-06-01

Adhesion micro-domains (ADs) formed during encounters of lymphocytes with antigen-presenting cells (APC) mediate the genetic expression of quanta of cytokines interleukin-2 (IL-2). The IL-2-induced activation of IL-2 receptors promotes the stepwise progression of the T-cells through the cell cycle, hence their name, immunological synapses. The ADs form short-lived reaction centres controlling the recruitment of activators of the biochemical pathway (the kinases Lck and ZAP) while preventing the access of inhibitors (phosphatase CD45) through steric repulsion forces. CD45 acts as the generator of adhesion domains and, through its role as a spacer protein, also as the promoter of the reaction. In a second phase of T-cell-APC encounters, long-lived global reaction spaces (called supramolecular activation complexes (SMAC)) form by talin-mediated binding of the T-cell integrin (LFA-1) to the counter-receptor ICAM-1, resulting in the formation of ring-like tight adhesion zones (peripheral SMAC). The ADs move to the centre of the intercellular adhesion zone forming the central SMAC, which serve in the recycling of the AD. We propose that cell stimulation is triggered by integrating the effect evoked by the short-lived adhesion domains. Similar global reaction platforms are formed by killer cells to destruct APC. We present a testable mechanical model showing that global reaction spaces (SMAC or dome-like contacts between cytotoxic cells and APC) form by self-organization through delayed activation of the integrin-binding affinity and stabilization of the adhesion zones by F-actin recruitment. The mechanical stability and the polarization of the adhering T-cells are mediated by microtubule-actin cross-talk.

Mantle transition zone input to kimberlite magmatism near a subduction zone: Origin of anomalous Nd-Hf isotope systematics at Lac de Gras, Canada

NASA Astrophysics Data System (ADS)

Tappe, Sebastian; Graham Pearson, D.; Kjarsgaard, Bruce A.; Nowell, Geoff; Dowall, David

2013-06-01

Late Cretaceous-Eocene kimberlites from the Lac de Gras area, central Slave craton, show the most extreme Nd-Hf isotope decoupling observed for kimberlites worldwide. They are characterized by a narrow range of moderately enriched Nd isotope compositions (ɛNd(i)=-0.4 to -3.5) that contrasts strongly with their moderately depleted to highly enriched ɛHf(i) values (+3.9 to -9.9). Although digestion of cratonic mantle material in proto-kimberlite melt can theoretically produce steep arrays in Nd-Hf isotope space, the amount of contaminant required to explain the Lac de Gras data is unrealistic. Instead, it is more plausible that mixing of compositionally discrete melt components within an isotopically variable source region is responsible for the steep Nd-Hf isotope array. As development of strongly negative ΔɛHf requires isotopic aging of a precursor material with Sm/Nd≫Lu/Hf for billion-year timescales, a number of models have been proposed where ancient MORB crust trapped in the mantle transition zone is the ultimate source of the extreme Hf isotope signature. However, we provide a conceptual modification and demonstrate that OIB-type domains within ancient subducted oceanic lithosphere can produce much stronger negative ΔɛHf during long-term isolation. Provided that these OIB-type domains have lower melting points compared with associated MORB crust, they are among the first material to melt within the transition zone during thermal perturbations. The resulting hydrous alkali silicate melts react strongly with depleted peridotite at the top of the transition zone and transfer negative ΔɛHf signatures to less dense materials, which can be more easily entrained within upward flowing mantle. Once these entrained refertilized domains rise above 300 km depth, they may become involved in CO2- and H2O-fluxed redox melting of upper mantle peridotite beneath a thick cratonic lid. We argue that incorporation of ancient transition zone material, which includes

S-type granite generation and emplacement during a regional switch from extensional to contractional deformation (Central Iberian Zone, Iberian autochthonous domain, Variscan Orogeny)

NASA Astrophysics Data System (ADS)

Pereira, M. F.; Díez Fernández, R.; Gama, C.; Hofmann, M.; Gärtner, A.; Linnemann, U.

2018-01-01

Zircon grains extracted from S-type granites of the Mêda-Escalhão-Penedono Massif (Central Iberian Zone, Variscan Orogen) constrain the timing of emplacement and provide information about potential magma sources. Simple and composite zircon grains from three samples of S-type granite were analyzed by LA-ICP-MS. New U-Pb data indicate that granites crystallized in the Bashkirian (318.7 ± 4.8 Ma) overlapping the proposed age range of ca. 321-317 Ma of the nearby S-type granitic rocks of the Carrazeda de Anciães, Lamego and Ucanha-Vilar massifs. The timing of emplacement of such S-type granites seems to coincide with the waning stages of activity of a D2 extensional shear zone (i.e. Pinhel shear zone) developed in metamorphic conditions that reached partial melting and anatexis (ca. 321-317 Ma). Dykes of two-mica granites (resembling diatexite migmatite) are concordant and discordant to the compositional layering and S2 (main) foliation of the high-grade metamorphic rocks of the Pinhel shear zone. Much of the planar fabric in these dykes was formed during magmatic crystallization and subsequent solid-state deformation. Field relationships suggest contemporaneity between the ca. 319-317 Ma old magmatism of the study area and the switch from late D2 extensional deformation to early D3 contractional deformation. Inherited zircon cores are well preserved in these late D2-early D3 S-type granite plutons. U-Pb ages of inherited zircon cores range from ca. 2576 to ca. 421 Ma. The spectra of inherited cores overlap closely the range of detrital and magmatic zircon grains displayed by the Ediacaran to Silurian metasedimentary and metaigneous rocks of the Iberian autochthonous and parautochthonous domains. This is evidence of a genetic relationship between S-type granites and the host metamorphic rocks. There is no substantial evidence for the addition of mantle-derived material in the genesis of these late D2-early D3 S-type granitic rocks. The ɛNd arrays of heterogeneous

Zone analysis in biology articles as a basis for information extraction.

PubMed

Mizuta, Yoko; Korhonen, Anna; Mullen, Tony; Collier, Nigel

2006-06-01

In the field of biomedicine, an overwhelming amount of experimental data has become available as a result of the high throughput of research in this domain. The amount of results reported has now grown beyond the limits of what can be managed by manual means. This makes it increasingly difficult for the researchers in this area to keep up with the latest developments. Information extraction (IE) in the biological domain aims to provide an effective automatic means to dynamically manage the information contained in archived journal articles and abstract collections and thus help researchers in their work. However, while considerable advances have been made in certain areas of IE, pinpointing and organizing factual information (such as experimental results) remains a challenge. In this paper we propose tackling this task by incorporating into IE information about rhetorical zones, i.e. classification of spans of text in terms of argumentation and intellectual attribution. As the first step towards this goal, we introduce a scheme for annotating biological texts for rhetorical zones and provide a qualitative and quantitative analysis of the data annotated according to this scheme. We also discuss our preliminary research on automatic zone analysis, and its incorporation into our IE framework.

An Exclusion Zone for Ca2+ Channels around Docked Vesicles Explains Release Control by Multiple Channels at a CNS Synapse

PubMed Central

Keller, Daniel; Babai, Norbert; Kochubey, Olexiy; Han, Yunyun; Markram, Henry; Schürmann, Felix; Schneggenburger, Ralf

2015-01-01

The spatial arrangement of Ca2+ channels and vesicles remains unknown for most CNS synapses, despite of the crucial importance of this geometrical parameter for the Ca2+ control of transmitter release. At a large model synapse, the calyx of Held, transmitter release is controlled by several Ca2+ channels in a "domain overlap" mode, at least in young animals. To study the geometrical constraints of Ca2+ channel placement in domain overlap control of release, we used stochastic MCell modelling, at active zones for which the position of docked vesicles was derived from electron microscopy (EM). We found that random placement of Ca2+ channels was unable to produce high slope values between release and presynaptic Ca2+ entry, a hallmark of domain overlap, and yielded excessively large release probabilities. The simple assumption that Ca2+ channels can be located anywhere at active zones, except below a critical distance of ~ 30 nm away from docked vesicles ("exclusion zone"), rescued high slope values and low release probabilities. Alternatively, high slope values can also be obtained by placing all Ca2+ channels into a single supercluster, which however results in significantly higher heterogeneity of release probabilities. We also show experimentally that high slope values, and the sensitivity to the slow Ca2+ chelator EGTA-AM, are maintained with developmental maturation of the calyx synapse. Taken together, domain overlap control of release represents a highly organized active zone architecture in which Ca2+ channels must obey a certain distance to docked vesicles. Furthermore, domain overlap can be employed by near-mature, fast-releasing synapses. PMID:25951120

Phanerozoic geological evolution of the Equatorial Atlantic domain

NASA Astrophysics Data System (ADS)

Basile, Christophe; Mascle, Jean; Guiraud, René

2005-10-01

The Phanerozoic geological evolution of the Equatorial Atlantic domain has been controlled since the end of Early Cretaceous by the Romanche and Saint Paul transform faults. These faults did not follow the PanAfrican shear zones, but were surimposed on Palæozoic basins. From Neocomian to Barremian, the Central Atlantic rift propagated southward in Cassiporé and Marajó basins, and the South Atlantic rift propagated northward in Potiguar and Benue basins. During Aptian times, the Equatorial Atlantic transform domain appeared as a transfer zone between the northward propagating tip of South Atlantic and the Central Atlantic. Between the transform faults, oceanic accretion started during Late Aptian in small divergent segments, from south to north: Benin-Mundaú, deep Ivorian basin-Barreirinhas, Liberia-Cassiporé. From Late Aptian to Late Albian, the Togo-Ghana-Ceará basins appeared along the Romanche transform fault, and Côte d'Ivoire-Parà-Maranhão basins along Saint Paul transform fault. They were rapidly subsiding in intra-continental settings. During Late Cretaceous, these basins became active transform continental margins, and passive margins since Santonian times. In the same time, the continental edge uplifted leading either to important erosion on the shelf or to marginal ridges parallel to the transform faults in deeper settings.

An updated model of induced airflow in the unsaturated zone

USGS Publications Warehouse

Baehr, Arthur L.; Joss, Craig J.

1995-01-01

Simulation of induced movement of air in the unsaturated zone provides a method to determine permeability and to design vapor extraction remediation systems. A previously published solution to the airflow equation for the case in which the unsaturated zone is separated from the atmosphere by a layer of lower permeability (such as a clay layer) has been superseded. The new solution simulates airflow through the layer of lower permeability more rigorously by defining the leakage in terms of the upper boundary condition rather than by adding a leakage term to the governing airflow equation. This note presents the derivation of the new solution. Formulas for steady state pressure, specific discharge, and mass flow in the domain are obtained for the new model and for the case in which the unsaturated zone is in direct contact with the atmosphere.

Roles of JnRAP2.6-like from the transition zone of black walnut in hormone signaling

Treesearch

Zhonglian Huang; Peng Zhao; Jose Medina; Richard Meilan; Keith Woeste

2013-01-01

An EST sequence, designated JnRAP2-like, was isolated from tissue at the heartwood/sapwood transition zone (TZ) in black walnut (Juglans nigra L). The deduced amino acid sequence of JnRAP2-like protein consists of a single AP2- containing domain with significant similarity to conserved AP2/ERF DNA-binding domains in other...

Vadose zone studies at an industrial contaminated site: the vadose zone monitoring system and cross-hole geophysics

NASA Astrophysics Data System (ADS)

Fernandez de Vera, Natalia; Beaujean, Jean; Jamin, Pierre; Nguyen, Frédéric; Dahan, Ofer; Vanclooster, Marnik; Brouyère, Serge

2014-05-01

In order to improve risk characterization and remediation measures for soil and groundwater contamination, there is a need to improve in situ vadose zone characterization. However, most available technologies have been developed in the context of agricultural soils. Such methodologies are not applicable at industrial sites, where soils and contamination differ in origin and composition. In addition, most technologies are applicable only in the first meters of soils, leaving deeper vadose zones with lack of information, in particular on field scale heterogeneity. In order to overcome such difficulties, a vadose zone experiment has been setup at a former industrial site in Belgium. Industrial activities carried out on site left a legacy of soil and groundwater contamination in BTEX, PAH, cyanide and heavy metals. The experiment comprises the combination of two techniques: the Vadose Zone Monitoring System (VMS) and cross-hole geophysics. The VMS allows continuous measurements of water content and temperature at different depths of the vadose zone. In addition, it provides the possibility of pore water sampling at different depths. The system is formed by a flexible sleeve containing monitoring units along its depth which is installed in a slanted borehole. The flexible sleeve contains three types of monitoring units in the vadose zone: Time Domain Transmissometry (TDT), which allows water content measurements; Vadose Sampling Ports (VSP), used for collecting water samples coming from the matrix; the Fracture Samplers (FS), which are used for retrieving water samples from the fractures. Cross-hole geophysics techniques consist in the injection of an electrical current using electrodes installed in vertical boreholes. From measured potential differences, detailed spatial patterns about electrical properties of the subsurface can be inferred. Such spatial patterns are related with subsurface heterogeneities, water content and solute concentrations. Two VMS were

The Arctic Marine Pulses Model: Linking Contiguous Domains in the Pacific Arctic Region

NASA Astrophysics Data System (ADS)

Moore, S. E.; Stabeno, P. J.

2016-02-01

The Pacific Arctic marine ecosystem extends from the northern Bering Sea, across the Chukchi and into the East Siberian and Beaufort seas. Food webs in this domain are short, a simplicity that belies the biophysical complexity underlying trophic linkages from primary production to humans. Existing biophysical models, such as pelagic-benthic coupling and advective processes, provide frameworks for connecting certain aspects of the marine food web, but do not offer a full accounting of events that occur seasonally across the Pacific Arctic. In the course of the Synthesis of Arctic Research (SOAR) project, a holistic Arctic Marine Pulses (AMP) model was developed that depicts seasonal biophysical `pulses' across a latitudinal gradient, and linking four previously-described contiguous domains, including the: (i) Pacific-Arctic domain = the focal region; (ii) seasonal ice zone domain; (iii) Pacific marginal domain; and (iv) riverine coastal domain. The AMP model provides a spatial-temporal framework to guide research on dynamic ecosystem processes during this period of rapid biophysical changes in the Pacific Arctic. Some of the processes included in the model, such as pelagic-benthic coupling in the Northern Bering and Chukchi seas, and advection and upwelling along the Beaufort shelf, are already the focus of sampling via the Distributed Biological Observatory (DBO) and other research programs. Other aspects such as biological processes associated with the seasonal ice zone and trophic responses to riverine outflow have received less attention. The AMP model could be enhanced by the application of visualization tools to provide a means to watch a season unfold in space and time. The capability to track sea ice dynamics and water masses and to move nutrients, prey and upper-trophic predators in space and time would provide a strong foundation for the development of predictive human-inclusive ecosystem models for the Pacific Arctic.

Enhanced service zone architecture for multiservices over IP

NASA Astrophysics Data System (ADS)

Michaely, Boaz; Mohan, Seshadri

2001-07-01

Recently, the field of IP Telephony has been experienced considerable evolution through the specification of new protocols and introduction of products implementing these protocols. We visualize IP Telephony evolving to soon offer multiservices encompassing not only voice, but also data, video and multimedia. While the progress has focused on refining protocols and architectures, very little attention has been given to business models for offering these services. This paper introduces the concept of a Service Zone, which from a service provider/network operator perspective fits within the operator's administrative domain, but is viewed as an independent zone with its own management and services, requiring minimal integration with the core network services. Besides its own management, the Enhanced Services Zone may also provide provisioning and maintenance features needed to provide the customer services and availability that subscribers expect from a telephony service providers. The platform must provide reliable service over time, be scalable to meet increased capacity demands, and be upgradeable to incorporate advanced services and features as they become available. Signaling flows are illustrated using SIP and H.323.

Development of the Cellular Immune System of Drosophila Requires the Membrane Attack Complex/Perforin-Like Protein Torso-Like.

PubMed

Forbes-Beadle, Lauren; Crossman, Tova; Johnson, Travis K; Burke, Richard; Warr, Coral G; Whisstock, James C

2016-10-01

Pore-forming members of the membrane attack complex/perforin-like (MACPF) protein superfamily perform well-characterized roles as mammalian immune effectors. For example, complement component 9 and perforin function to directly form pores in the membrane of Gram-negative pathogens or virally infected/transformed cells, respectively. In contrast, the only known MACPF protein in Drosophila melanogaster, Torso-like, plays crucial roles during development in embryo patterning and larval growth. Here, we report that in addition to these functions, Torso-like plays an important role in Drosophila immunity. However, in contrast to a hypothesized effector function in, for example, elimination of Gram-negative pathogens, we find that torso-like null mutants instead show increased susceptibility to certain Gram-positive pathogens such as Staphylococcus aureus and Enterococcus faecalis We further show that this deficit is due to a severely reduced number of circulating immune cells and, as a consequence, an impaired ability to phagocytose bacterial particles. Together these data suggest that Torso-like plays an important role in controlling the development of the Drosophila cellular immune system. Copyright © 2016 by the Genetics Society of America.

ACUTE ZONAL OCCULT OUTER RETINOPATHY: Structural and Functional Analysis Across the Transition Zone Between Healthy and Diseased Retina.

PubMed

Duncker, Tobias; Lee, Winston; Jiang, Fan; Ramachandran, Rithambara; Hood, Donald C; Tsang, Stephen H; Sparrow, Janet R; Greenstein, Vivienne C

2018-01-01

To assess structure and function across the transition zone (TZ) between relatively healthy and diseased retina in acute zonal occult outer retinopathy. Six patients (6 eyes; age 22-71 years) with acute zonal occult outer retinopathy were studied. Spectral-domain optical coherence tomography, fundus autofluorescence, near-infrared reflectance, color fundus photography, and fundus perimetry were performed and images were registered to each other. The retinal layers of the spectral-domain optical coherence tomography scans were segmented and the thicknesses of two outer retinal layers, that is, the total receptor and outer segment plus layers, and the retinal nerve fiber layer were measured. All eyes showed a TZ on multimodal imaging. On spectral-domain optical coherence tomography, the TZ was in the nasal retina at varying distances from the fovea. For all eyes, it was associated with loss of the ellipsoid zone band, significant thinning of the two outer retinal layers, and in three eyes with thickening of the retinal nerve fiber layer. On fundus autofluorescence, all eyes had a clearly demarcated peripapillary area of abnormal fundus autofluorescence delimited by a border of high autofluorescence; the latter was associated with loss of the ellipsoid zone band and with a change from relatively normal to markedly decreased or nonrecordable visual sensitivity on fundus perimetry. The results of multimodal imaging clarified the TZ in acute zonal occult outer retinopathy. The TZ was outlined by a distinct high autofluorescence border that correlated with loss of the ellipsoid zone band on spectral-domain optical coherence tomography. However, in fundus areas that seemed healthy on fundus autofluorescence, thinning of the outer retinal layers and thickening of the retinal nerve fiber layer were observed near the TZ. The TZ was also characterized by a decrease in visual sensitivity.

Information fusion for the Gray Zone

NASA Astrophysics Data System (ADS)

Fenstermacher, Laurie

2016-05-01

United States Special Operations Command (SOCOM) recently published a white paper describing the "Gray Zone", security challenges characterized by "ambiguity about the nature of the conflict, opacity of the parties involved…competitive interactions among and within state and non-state actors that fall between the traditional war and peace duality."1 Ambiguity and related uncertainty about actors, situations, relationships, and intent require new approaches to information collection, processing and fusion. General Votel, the current SOCOM commander, during a recent speech on "Operating in the Gray Zone" emphasized that it would be important to get left of the next crises and stated emphatically, "to do that we must understand the Human Domain."2 This understanding of the human domain must come from making meaning based on different perspectives, including the "emic" or first person/participant and "etic" or third person/observer perspectives. Much of the information currently collected and processed is etic. Incorporation and fusion with the emic perspective enables forecasting of behaviors/events and provides context for etic information (e.g., video).3 Gray zone challenges are perspective-dependent; for example, the conflict in Ukraine is interpreted quite differently by Russia, the US and Ukraine. Russia views it as war, necessitating aggressive action, the US views it as a security issue best dealt with by economic sanctions and diplomacy and the Ukraine views it as a threat to its sovereignty.4 General Otto in the Air Force ISR 2023 vision document stated that Air Force ISR is needed to anticipate strategic surprise.5 Anticipatory analysis enabling getting left of a crisis inherently requires a greater focus on information sources that elucidate the human environment as well as new methods that elucidate not only the "who's" and "what's", but the "how's and "why's," extracting features and/or patterns and subtle cues useful for forecasting behaviors and

Investigating the influence of DNAPL spill characteristics on source zone architecture and mass removal in pool-dominated source zones

NASA Astrophysics Data System (ADS)

Wallace, K. A.; Abriola, L.; Chen, M.; Ramsburg, A.; Pennell, K. D.; Christ, J.

2009-12-01

Multiphase, compositional simulators were employed to investigate the spill characteristics and subsurface properties that lead to pool-dominated, dense non-aqueous phase liquid (DNAPL) source zone architectures. DNAPL pools commonly form at textural interfaces where low permeability lenses restrict the vertical migration of DNAPL, allowing for DNAPL to accumulate, reaching high saturation. Significant pooling has been observed in bench-scale experiments and field settings. However, commonly employed numerical simulations rarely predict the pooling suspected in the field. Given the importance of pooling on the efficacy of mass recovery and the down-gradient contaminant signal, it is important to understand the predominant factors affecting the creation of pool-dominated source zones and their subsequent mass discharge. In this work, contaminant properties, spill characteristics and subsurface permeability were varied to investigate the factors contributing to the development of a pool-dominated source zone. DNAPL infiltration and entrapment simulations were conducted in two- and three-dimensional domains using the University of Texas Chemical Compositional (UTCHEM) simulator. A modified version of MT3DMS was then used to simulate DNAPL dissolution and mass discharge. Numerical mesh size was varied to investigate the importance of numerical model parameters on simulations results. The temporal evolution of commonly employed source zone architecture metrics, such as the maximum DNAPL saturation, first and second spatial moments, and fraction of DNAPL mass located in pools, was monitored to determine how the source zone architecture evolved with time. Mass discharge was monitored to identify the link between source zone architecture and down-gradient contaminant flux. Contaminant characteristics and the presence of extensive low permeability lenses appeared to have the most influence on the development of a pool-dominated source zone. The link between DNAPL mass

Style and rate of quaternary deformation of the Hosgri Fault Zone, offshore south-central coastal California

USGS Publications Warehouse

Hanson, Kathryn L.; Lettis, William R.; McLaren, Marcia; Savage, William U.; Hall, N. Timothy; Keller, Mararget A.

2004-01-01

The Hosgri Fault Zone is the southernmost component of a complex system of right-slip faults in south-central coastal California that includes the San Gregorio, Sur, and San Simeon Faults. We have characterized the contemporary style of faulting along the zone on the basis of an integrated analysis of a broad spectrum of data, including shallow high-resolution and deep penetration seismic reflection data; geologic and geomorphic data along the Hosgri and San Simeon Fault Zones and the intervening San Simeon/Hosgri pull-apart basin; the distribution and nature of near-coast seismicity; regional tectonic kinematics; and comparison of the Hosgri Fault Zone with worldwide strike-slip, oblique-slip, and reverse-slip fault zones. These data show that the modern Hosgri Fault Zone is a convergent right-slip (transpressional) fault having a late Quaternary slip rate of 1 to 3 mm/yr. Evidence supporting predominantly strike-slip deformation includes (1) a long, narrow, linear zone of faulting and associated deformation; (2) the presence of asymmetric flower structures; (3) kinematically consistent localized extensional and compressional deformation at releasing and restraining bends or steps, respectively, in the fault zone; (4) changes in the sense and magnitude of vertical separation both along trend of the fault zone and vertically within the fault zone; (5) strike-slip focal mechanisms along the fault trace; (6) a distribution of seismicity that delineates a high-angle fault extending through the seismogenic crust; (7) high ratios of lateral to vertical slip along the fault zone; and (8) the separation by the fault of two tectonic domains (offshore Santa Maria Basin, onshore Los Osos domain) that are undergoing contrasting styles of deformation and orientations of crustal shortening. The convergent component of slip is evidenced by the deformation of the early-late Pliocene unconformity. In characterizing the style of faulting along the Hosgri Fault Zone, we assessed

Weak ductile shear zone beneath the western North Anatolian Fault Zone: inferences from earthquake cycle model constrained by geodetic observations

NASA Astrophysics Data System (ADS)

Yamasaki, T.; Wright, T. J.; Houseman, G. A.

2013-12-01

After large earthquakes, rapid postseismic transient motions are commonly observed. Later in the loading cycle, strain is typically focused in narrow regions around the fault. In simple two-layer models of the loading cycle for strike-slip faults, rapid post-seismic transients require low viscosities beneath the elastic layer, but localized strain later in the cycle implies high viscosities in the crust. To explain this apparent paradox, complex transient rheologies have been invoked. Here we test an alternative hypothesis in which spatial variations in material properties of the crust can explain the geodetic observations. We use a 3D viscoelastic finite element code to examine two simple models of periodic fault slip: a stratified model in which crustal viscosity decreases exponentially with depth below an upper elastic layer, and a block model in which a low viscosity domain centered beneath the fault is embedded in a higher viscosity background representing normal crust. We test these models using GPS data acquired before and after the 1999 Izmit/Duzce earthquakes on the North Anatolian Fault Zone (Turkey). The model with depth-dependent viscosity can show both high postseismic velocities, and preseismic localization of the deformation, if the viscosity contrast from top to bottom of layer exceeds a factor of about 104. However, with no lateral variations in viscosity, this model cannot explain the proximity to the fault of maximum postseismic velocities. In contrast, the model which includes a localized weak zone beneath the faulted elastic lid can explain all the observations, if the weak zone extends down to mid-crustal levels and outward to 10 or 20 km from the fault. The non-dimensional ratio of relaxation time to earthquake repeat time, τ/Δt, is the critical parameter in controlling the observed deformation. In the weak-zone model, τ/Δt should be in the range 0.005 to 0.01 in the weak domain, and larger than ~ 1.0 elsewhere. This implies a viscosity

Infrasound propagation in tropospheric ducts and acoustic shadow zones.

PubMed

de Groot-Hedlin, Catherine D

2017-10-01

Numerical computations of the Navier-Stokes equations governing acoustic propagation are performed to investigate infrasound propagation in the troposphere and into acoustic shadow zones. An existing nonlinear finite-difference, time-domain (FDTD) solver that constrains input sound speed models to be axisymmetric is expanded to allow for advection and rigid, stair-step topography. The FDTD solver permits realistic computations along a given azimuth. It is applied to several environmental models to examine the effects of nonlinearity, topography, advection, and two-dimensional (2D) variations in wind and sound speeds on the penetration of infrasound into shadow zones. Synthesized waveforms are compared to a recording of a rocket motor fuel elimination event at the Utah Test and Training Range. Results show good agreement in the amplitude, duration, and spectra of synthesized and recorded waveforms for propagation through 2D atmospheric models whether or not topography, advection, or nonlinearity is explicitly included. However, infrasound propagation through a one-dimensional, range-averaged, atmospheric model yields waveforms with lower amplitudes and frequencies, suggesting that small-scale atmospheric variability causes significant scatter within the troposphere, leading to enhanced infrasound penetration into shadow zones. Thus, unresolved fine-scale atmospheric dynamics are not required to explain infrasound propagation into shadow zones.

Hybrid Multiscale Simulation of Hydrologic and Biogeochemical Processes in the River-Groundwater Interaction Zone

NASA Astrophysics Data System (ADS)

Yang, X.; Scheibe, T. D.; Chen, X.; Hammond, G. E.; Song, X.

2015-12-01

The zone in which river water and groundwater mix plays an important role in natural ecosystems as it regulates the mixing of nutrients that control biogeochemical transformations. Subsurface heterogeneity leads to local hotspots of microbial activity that are important to system function yet difficult to resolve computationally. To address this challenge, we are testing a hybrid multiscale approach that couples models at two distinct scales, based on field research at the U. S. Department of Energy's Hanford Site. The region of interest is a 400 x 400 x 20 m macroscale domain that intersects the aquifer and the river and contains a contaminant plume. However, biogeochemical activity is high in a thin zone (mud layer, <1 m thick) immediately adjacent to the river. This microscale domain is highly heterogeneous and requires fine spatial resolution to adequately represent the effects of local mixing on reactions. It is not computationally feasible to resolve the full macroscale domain at the fine resolution needed in the mud layer, and the reaction network needed in the mud layer is much more complex than that needed in the rest of the macroscale domain. Hence, a hybrid multiscale approach is used to efficiently and accurately predict flow and reactive transport at both scales. In our simulations, models at both scales are simulated using the PFLOTRAN code. Multiple microscale simulations in dynamically defined sub-domains (fine resolution, complex reaction network) are executed and coupled with a macroscale simulation over the entire domain (coarse resolution, simpler reaction network). The objectives of the research include: 1) comparing accuracy and computing cost of the hybrid multiscale simulation with a single-scale simulation; 2) identifying hot spots of microbial activity; and 3) defining macroscopic quantities such as fluxes, residence times and effective reaction rates.

Mantle exhumation at magma-poor rifted margin: a competition between frictional shear zones and thermally weakened necking domains. Consequences on time of breakup at Galicia/Newfoundland margins.

NASA Astrophysics Data System (ADS)

Theunissen, T.; Huismans, R. S.

2017-12-01

Here we present a new analysis and interpretation of basement topography of the transitional domain from continental to oceanic crust along the conjugate margin sections SCREETCH-1 (Newfoundland) and WE-1/ISE-1 (Galicia Bank). The absence of significant syn-rift magmatism in this area allows using 2-D thermo-mechanical modelling to understand the formation of the distal margin and exhumed mantle. We show that plastic strain weakening of the exhumed mantle is required to explain observations on basement morphology, and detachment faulting. Our models predict that the evolution of detachment faulting within the transitional domain depends on the degree of frictional-plastic strain-weakening and varies from a single unique steady state asymmetric low angle detachment fault for large degree of strain weakening to multiple out-of-sequence forming detachments with or without dip reversal for lower amounts of strain-weakening. The model behaviour is a consequence of the competition between weak frictional-plastic shear zones and the thermally weakened necking domain in the footwall. The forward models reproduce elevations, wavelength of exhumed mantle ridges for a narrow range of rift velocitiesbetween 10 and 15 mm/yr and considering the increasing thermal conductivity of peridotites at shallow depth. This causes an efficient cooling of the footwall that has then enough strength to support high topography. The forward models also predict that the peridotite ridge is the breakaway of a second detachment fault that dates the crustal breakup and that rocks on top of the peridotite ridge have experimented a fast cooling (< 2 Ma). We use predictions from these forward models to discuss time of breakup and the position of the first steady state oceanic ridge at Galicia/Newfounlandconjugate margins.

Seismic evidence for flow in the hydrated mantle wedge of the Ryukyu subduction zone

PubMed Central

Nagaya, Takayoshi; Walker, Andrew M.; Wookey, James; Wallis, Simon R.; Ishii, Kazuhiko; Kendall, J. -Michael

2016-01-01

It is widely accepted that water-rich serpentinite domains are commonly present in the mantle above shallow subducting slabs and play key roles in controlling the geochemical cycling and physical properties of subduction zones. Thermal and petrological models show the dominant serpentine mineral is antigorite. However, there is no good consensus on the amount, distribution and alignment of this mineral. Seismic velocities are commonly used to identify antigorite-rich domains, but antigorite is highly-anisotropic and depending on the seismic ray path, its properties can be very difficult to distinguish from non-hydrated olivine-rich mantle. Here, we utilize this anisotropy and show how an analysis of seismic anisotropy that incorporates measured ray path geometries in the Ryukyu arc can constrain the distribution, orientation and amount of antigorite. We find more than 54% of the wedge must consist of antigorite and the alignment must change from vertically aligned to parallel to the slab. This orientation change suggests convective flow in the hydrated forearc mantle. Shear wave splitting analysis in other subduction zones indicates large-scale serpentinization and forearc mantle convection are likely to be more widespread than generally recognized. The view that the forearc mantle of cold subduction zones is dry needs to be reassessed. PMID:27436676

Seismic evidence for flow in the hydrated mantle wedge of the Ryukyu subduction zone.

PubMed

Nagaya, Takayoshi; Walker, Andrew M; Wookey, James; Wallis, Simon R; Ishii, Kazuhiko; Kendall, J-Michael

2016-07-20

It is widely accepted that water-rich serpentinite domains are commonly present in the mantle above shallow subducting slabs and play key roles in controlling the geochemical cycling and physical properties of subduction zones. Thermal and petrological models show the dominant serpentine mineral is antigorite. However, there is no good consensus on the amount, distribution and alignment of this mineral. Seismic velocities are commonly used to identify antigorite-rich domains, but antigorite is highly-anisotropic and depending on the seismic ray path, its properties can be very difficult to distinguish from non-hydrated olivine-rich mantle. Here, we utilize this anisotropy and show how an analysis of seismic anisotropy that incorporates measured ray path geometries in the Ryukyu arc can constrain the distribution, orientation and amount of antigorite. We find more than 54% of the wedge must consist of antigorite and the alignment must change from vertically aligned to parallel to the slab. This orientation change suggests convective flow in the hydrated forearc mantle. Shear wave splitting analysis in other subduction zones indicates large-scale serpentinization and forearc mantle convection are likely to be more widespread than generally recognized. The view that the forearc mantle of cold subduction zones is dry needs to be reassessed.

Study of the plastic zone around the ligament of thin sheet D.E.N.T specimen subjected to tensile

NASA Astrophysics Data System (ADS)

Djebali, S.; Larbi, S.; Bilek, A.

2015-03-01

One of the assumptions of Cotterell and Reddel's method of the essential work of fracture determination is the existence of a fracture process zone surrounded by an outer plastic zone extending to the whole ligament before crack initiation. To verify this hypothesis we developed a method based on micro hardness. The hardness values measured in the domain surrounding the tensile fracture area of ST-37-2 steel sheet D.E.N.T specimens confirm the existence of the two plastic zones. The extension of the plastic deformations to the whole ligament before the crack initiation and the circular shape of the outer plastic zone are revealed by the brittle coating method.

Optimization of remediation strategies using vadose zone monitoring systems

NASA Astrophysics Data System (ADS)

Dahan, Ofer

2016-04-01

In-situ bio-remediation of the vadose zone depends mainly on the ability to change the subsurface hydrological, physical and chemical conditions in order to enable development of specific, indigenous, pollutants degrading bacteria. As such the remediation efficiency is much dependent on the ability to implement optimal hydraulic and chemical conditions in deep sections of the vadose zone. These conditions are usually determined in laboratory experiments where parameters such as the chemical composition of the soil water solution, redox potential and water content of the sediment are fully controlled. Usually, implementation of desired optimal degradation conditions in deep vadose zone at full scale field setups is achieved through infiltration of water enriched with chemical additives on the land surface. It is assumed that deep percolation into the vadose zone would create chemical conditions that promote biodegradation of specific compounds. However, application of water with specific chemical conditions near land surface dose not necessarily results in promoting of desired chemical and hydraulic conditions in deep sections of the vadose zone. A vadose-zone monitoring system (VMS) that was recently developed allows continuous monitoring of the hydrological and chemical properties of deep sections of the unsaturated zone. The VMS includes flexible time-domain reflectometry (FTDR) probes which allow continuous monitoring of the temporal variation of the vadose zone water content, and vadose-zone sampling ports (VSPs) which are designed to allow frequent sampling of the sediment pore-water and gas at multiple depths. Implementation of the vadose zone monitoring system in sites that undergoes active remediation provides real time information on the actual chemical and hydrological conditions in the vadose zone as the remediation process progresses. Up-to-date the system has been successfully implemented in several studies on water flow and contaminant transport in

Finite difference time domain modeling of spiral antennas

NASA Technical Reports Server (NTRS)

Penney, Christopher W.; Beggs, John H.; Luebbers, Raymond J.

1992-01-01

The objectives outlined in the original proposal for this project were to create a well-documented computer analysis model based on the finite-difference, time-domain (FDTD) method that would be capable of computing antenna impedance, far-zone radiation patterns, and radar cross-section (RCS). The ability to model a variety of penetrable materials in addition to conductors is also desired. The spiral antennas under study by this project meet these requirements since they are constructed of slots cut into conducting surfaces which are backed by dielectric materials.

Clarinet (CLA-1), a novel active zone protein required for synaptic vesicle clustering and release

PubMed Central

Nelson, Jessica; Richmond, Janet E; Colón-Ramos, Daniel A; Shen, Kang

2017-01-01

Active zone proteins cluster synaptic vesicles at presynaptic terminals and coordinate their release. In forward genetic screens, we isolated a novel Caenorhabditis elegans active zone gene, clarinet (cla-1). cla-1 mutants exhibit defects in synaptic vesicle clustering, active zone structure and synapse number. As a result, they have reduced spontaneous vesicle release and increased synaptic depression. cla-1 mutants show defects in vesicle distribution near the presynaptic dense projection, with fewer undocked vesicles contacting the dense projection and more docked vesicles at the plasma membrane. cla-1 encodes three isoforms containing common C-terminal PDZ and C2 domains with homology to vertebrate active zone proteins Piccolo and RIM. The C-termini of all isoforms localize to the active zone. Specific loss of the ~9000 amino acid long isoform results in vesicle clustering defects and increased synaptic depression. Our data indicate that specific isoforms of clarinet serve distinct functions, regulating synapse development, vesicle clustering and release. PMID:29160205

What are the Geophysical Fingerprints of hyper-extended Crustal Domains ?

NASA Astrophysics Data System (ADS)

Stanton, N.; Manatschal, G.; Maia, M.; Viana, A.; Tugend, J.; Autin, J.

2012-04-01

The Iberian margin is a well-studied region and presently the best tectonic setting for understanding the dynamic process of margin's formation and evolution. The world largest available dataset enabled to properly constrain the crustal structure and opened new paradigms for passive margins studies. Nevertheless, there are numerous remaining questions, as for example what is the spatial extent of continental inheritance along the margin and what is the role of fluids (serpentinization/magmatism) during margin's formation/deformation? The observation of a hyper-extended crustal domain, now also identified in other margins reveals the highly diverse nature of the crust along rifted margins. What are its physical properties and how do they change laterally? The aim of this study is to explore the physical signature of the serpentinized crust, which composes this hyper-extended domain, to identify the limits of the system and discuss its nature and importance. To investigate the lateral variation of crustal types we use integrated gravity, magnetic, seismic and available geological/well data. Transformations on the potential field data enable us to enhance the horizontal and vertical variations of the crust, and future forward modeling will provide a geological correlation for Iberia. The preliminary results showed that the transitional crust can be subdivided into two zones, regarding their different geophysical signatures: from the necking zone, the continent ward transitional crust displays decreasing gravity anomaly, low horizontal gradient and smooth magnetic anomalies; towards offshore (to the west of the J anomaly) the transitional crust is characterized by a semi-cyclic magnetic anomaly pattern, with increasing gravity, showing a stronger horizontal gradient and rough bathymetry. We associate this transitional domain with an embryonic oceanic type crust. Comparisons with other margins along the North Atlantic, despite the great spatial variation, reveals

GIS, Geoscience, Multi-criteria Analysis and Integrated Management of the Coastal Zone

NASA Astrophysics Data System (ADS)

Kacimi, Y.; Barich, A.

2011-12-01

In this 3rd millennium, geology can be considered as a science of decision that intervenes in all the society domains. It has passed its academic dimension to spread toward some domains that until now were out of reach. Combining different Geoscience sub-disciplines emanates from a strong will to demonstrate the contribution of this science and its impact on the daily life, especially by making it applicable to various innovative projects. Geophysics, geochemistry and structural geology are complementary disciplines that can be applied in perfect symbiosis in many domains like construction, mining prospection, impact assessment, environment, etc. This can be proved by using collected data from these studies and integrate them into Geographic Information Systems (GIS), in order to make a multi-criteria analysis, which gives generally very impressive results. From this point, it is easy to set mining, eco-geotouristic and risk assessment models in order to establish land use projects but also in the case of integrated management of the coastal zone (IMCZ). Touristic projects in Morocco focus on its coast which represents at least 3500 km ; the management of this zone for building marinas or touristic infrastructures requires a deep and detailed study of marine currents on the coast, for example, by creating surveillance models and a coastal hazards map. An innovative project that will include geophysical, geochemical and structural geology studies associated to a multi-criteria analysis. The data will be integrated into a GIS to establish a coastal map that will highlight low-risk erosion zones and thus will facilitate implementation of ports and other construction projects. YES Morocco is a chapter of the International YES Network that aims to promote Geoscience in the service of society and professional development of Young and Early Career Geoscientists. Our commitment for such project will be of qualitative aspect into an associative framework that will involve

Root Apex Transition Zone As Oscillatory Zone

PubMed Central

Baluška, František; Mancuso, Stefano

2013-01-01

Root apex of higher plants shows very high sensitivity to environmental stimuli. The root cap acts as the most prominent plant sensory organ; sensing diverse physical parameters such as gravity, light, humidity, oxygen, and critical inorganic nutrients. However, the motoric responses to these stimuli are accomplished in the elongation region. This spatial discrepancy was solved when we have discovered and characterized the transition zone which is interpolated between the apical meristem and the subapical elongation zone. Cells of this zone are very active in the cytoskeletal rearrangements, endocytosis and endocytic vesicle recycling, as well as in electric activities. Here we discuss the oscillatory nature of the transition zone which, together with several other features of this zone, suggest that it acts as some kind of command center. In accordance with the early proposal of Charles and Francis Darwin, cells of this root zone receive sensory information from the root cap and instruct the motoric responses of cells in the elongation zone. PMID:24106493

Technical Note: Approximate solution of transient drawdown for constant-flux pumping at a partially penetrating well in a radial two-zone confined aquifer

NASA Astrophysics Data System (ADS)

Huang, C.-S.; Yang, S.-Y.; Yeh, H.-D.

2015-06-01

An aquifer consisting of a skin zone and a formation zone is considered as a two-zone aquifer. Existing solutions for the problem of constant-flux pumping in a two-zone confined aquifer involve laborious calculation. This study develops a new approximate solution for the problem based on a mathematical model describing steady-state radial and vertical flows in a two-zone aquifer. Hydraulic parameters in these two zones can be different but are assumed homogeneous in each zone. A partially penetrating well may be treated as the Neumann condition with a known flux along the screened part and zero flux along the unscreened part. The aquifer domain is finite with an outer circle boundary treated as the Dirichlet condition. The steady-state drawdown solution of the model is derived by the finite Fourier cosine transform. Then, an approximate transient solution is developed by replacing the radius of the aquifer domain in the steady-state solution with an analytical expression for a dimensionless time-dependent radius of influence. The approximate solution is capable of predicting good temporal drawdown distributions over the whole pumping period except at the early stage. A quantitative criterion for the validity of neglecting the vertical flow due to a partially penetrating well is also provided. Conventional models considering radial flow without the vertical component for the constant-flux pumping have good accuracy if satisfying the criterion.

Zone separator for multiple zone vessels

DOEpatents

Jones, John B.

1983-02-01

A solids-gas contact vessel, having two vertically disposed distinct reaction zones, includes a dynamic seal passing solids from an upper to a lower zone and maintaining a gas seal against the transfer of the separate treating gases from one zone to the other, and including a stream of sealing fluid at the seal.

Predicting km-scale shear zone formation

NASA Astrophysics Data System (ADS)

Gerbi, Christopher; Culshaw, Nicholas; Shulman, Deborah; Foley, Maura; Marsh, Jeffrey

2015-04-01

Because km-scale shear zones play a first-order role in lithospheric kinematics, accurate conceptual and numerical models of orogenic development require predicting when and where they form. Although a strain-based algorithm in the upper crust for weakening due to faulting appears to succeed (e.g., Koons et al., 2010, doi:10.1029/2009TC002463), a comparable general rule for the viscous crust remains unestablished. Here we consider two aspects of the geological argument for a similar algorithm in the viscous regime, namely (1) whether predicting km-scale shear zone development based on a single parameter (such as strain or shear heating) is reasonable; and (2) whether lithologic variability inherent in most orogenic systems precludes a simple predictive rule. A review of tectonically significant shear zones worldwide and more detailed investigations in the Central Gneiss belt of the Ontario segment of the Grenville Province reveals that most km-scale shear zones occur at lithological boundaries and involve mass transfer, but have fairly little else in common. As examples, the relatively flat-lying Twelve Mile Bay shear zone in the western Central Gneiss belt bounds the Parry Sound domain and is likely the product of both localized anatexis and later retrograde hydration with attendant metamorphism. Moderately dipping shear zones in granitoids of the Grenville Front Tectonic Zone apparently resulted from cooperation among several complementary microstructural processes, such as grain size reduction, enhanced diffusion, and a small degree of metamorphic reaction. Localization into shear zones requires the operation of some spatially restricted processes such as stress concentration, metamorphism/fluid access, textural evolution, and thermal perturbation. All of these could be due in part to strain, but not necessarily linearly related to strain. Stress concentrations, such as those that form at rheological boundaries, may be sufficient to nucleate high strain

Decoupling of the Assimilation and Fractionation Signatures in a MASH Zone: Evidence from the Sierra Valle Fértil Mafic Zone, Argentina

NASA Astrophysics Data System (ADS)

Walker, B. A., Jr.; Bergantz, G. W.; Otamendi, J.; Ducea, M. N.; Cristofolini, E.

2015-12-01

The Sierra Valle Fértil (SVF) in northern Argentina is a tilted Ordovician fossil arc complex with continuous exposure from paleodepths of ~10 km to ~30 km. The system is layered when viewed at a large scale: shallow, granodiorite plutons give way to a heterogeneous granodiorite-tonalite zone, which in turn grades into a gabbro-tonalite zone at the base of the section. A metapelitic country rock package is interlayered throughout the magmatic complex, allowing for determination of emplacement depths within the section. Our work focuses on the lowermost domain of the SVF, as it preserves what we consider to be a frozen example of a MASH zone. Here, dominant rock types are hornblende gabbronorite and tonalitie variants, which appear to be interfingered as dm- to 10s of m-scale sheets. Mappable ultramafic pods containing dunites, websterites, troctolites, and minor anorthosites are also present. Field relations are consistent with a complex series of intrusive events. Much of the SVF mafic zone compositional array can be modeled by fractional crystallization where the mafic rocks are cumulate assemblages and the intermediate rocks are the daughter magmas. Amphibole and, perhaps more importantly, Fe-Ti oxide crystallization are likely the principal agents of silica enrichment. Metapelitic rocks exposed throughout the SVF are likely the vestiges of a country rock package that was melted (or reacted) and incorporated into SVF magmas, but field and compositional evidence for assimilation is cryptic in the mafic zone. While isotopic data (Sr, Nd, O) seem to implicate crustal contributions to the SVF mafic zone, incompatible major and trace elements typically associated with an "assimilation signature" (e.g., K, Rb, Ba) are sparse. Such elements are abundant in the metapelites and in igneous rocks farther up section. We interpret this isotopic and elemental decoupling as a byproduct of prolonged MASH processes in the lower crust. A high temperature and an increasingly

Supra-domains: evolutionary units larger than single protein domains.

PubMed

Vogel, Christine; Berzuini, Carlo; Bashton, Matthew; Gough, Julian; Teichmann, Sarah A

2004-02-20

Domains are the evolutionary units that comprise proteins, and most proteins are built from more than one domain. Domains can be shuffled by recombination to create proteins with new arrangements of domains. Using structural domain assignments, we examined the combinations of domains in the proteins of 131 completely sequenced organisms. We found two-domain and three-domain combinations that recur in different protein contexts with different partner domains. The domains within these combinations have a particular functional and spatial relationship. These units are larger than individual domains and we term them "supra-domains". Amongst the supra-domains, we identified some 1400 (1203 two-domain and 166 three-domain) combinations that are statistically significantly over-represented relative to the occurrence and versatility of the individual component domains. Over one-third of all structurally assigned multi-domain proteins contain these over-represented supra-domains. This means that investigation of the structural and functional relationships of the domains forming these popular combinations would be particularly useful for an understanding of multi-domain protein function and evolution as well as for genome annotation. These and other supra-domains were analysed for their versatility, duplication, their distribution across the three kingdoms of life and their functional classes. By examining the three-dimensional structures of several examples of supra-domains in different biological processes, we identify two basic types of spatial relationships between the component domains: the combined function of the two domains is such that either the geometry of the two domains is crucial and there is a tight constraint on the interface, or the precise orientation of the domains is less important and they are spatially separate. Frequently, the role of the supra-domain becomes clear only once the three-dimensional structure is known. Since this is the case for only a

Identifying the transition to the maturation zone in three ecotypes of Arabidopsis thaliana roots.

PubMed

Cajero Sánchez, Wendy; García-Ponce, Berenice; Sánchez, María de la Paz; Álvarez-Buylla, Elena R; Garay-Arroyo, Adriana

2018-01-01

The Arabidopsis thaliana (hereafter Arabidopsis) root has become a useful model for studying how organ morphogenesis emerge from the coordination and balance of cell proliferation and differentiation, as both processes may be observed and quantified in the root at different stages of development. Hence, being able to objectively identify and delimit the different stages of root development has been very important. Up to now, three different zones along the longitudinal axis of the primary root of Arabidopsis, have been identified: the root apical meristematic zone (RAM) with two domains [the proliferative (PD) and the transition domain (TD)], the elongation zone (EZ) and the maturation zone (MZ). We previously reported a method to quantify the length of the cells of the meristematic and the elongation zone, as well as the boundaries or transitions between the root domains along the growing part of the Arabidopsis root. In this study, we provide a more accurate criterion to identify the MZ. Traditionally, the transition between the EZ to the MZ has been established by the emergence of the first root-hair bulge in the epidermis, because this emergence coincides with cell maturation in this cell type. But we have found here that after the emergence of the first root-hair bulge some cells continue to elongate and we have confirmed this in three different Arabidopsis ecotypes. We established the limit between the EZ and the MZ by looking for the closest cortical cell with a longer length than the average cell length of 10 cells after the cortical cell closest to the epidermal cell with the first root-hair bulge in these three ecotypes. In Col-0 and Ws this cell is four cells above the one with the root hair bulge and, in the Ler ecotype, this cell is five cells above. To unambiguously identifying the site at which cells stop elongating and attain their final length and fate at the MZ, we propose to calculate the length of completely elongated cortical cells counting 10

Identifying the transition to the maturation zone in three ecotypes of Arabidopsis thaliana roots

PubMed Central

Cajero Sánchez, Wendy; García-Ponce, Berenice; Sánchez, María de la Paz; Álvarez-Buylla, Elena R.; Garay-Arroyo, Adriana

2018-01-01

ABSTRACT The Arabidopsis thaliana (hereafter Arabidopsis) root has become a useful model for studying how organ morphogenesis emerge from the coordination and balance of cell proliferation and differentiation, as both processes may be observed and quantified in the root at different stages of development. Hence, being able to objectively identify and delimit the different stages of root development has been very important. Up to now, three different zones along the longitudinal axis of the primary root of Arabidopsis, have been identified: the root apical meristematic zone (RAM) with two domains [the proliferative (PD) and the transition domain (TD)], the elongation zone (EZ) and the maturation zone (MZ). We previously reported a method to quantify the length of the cells of the meristematic and the elongation zone, as well as the boundaries or transitions between the root domains along the growing part of the Arabidopsis root. In this study, we provide a more accurate criterion to identify the MZ. Traditionally, the transition between the EZ to the MZ has been established by the emergence of the first root-hair bulge in the epidermis, because this emergence coincides with cell maturation in this cell type. But we have found here that after the emergence of the first root-hair bulge some cells continue to elongate and we have confirmed this in three different Arabidopsis ecotypes. We established the limit between the EZ and the MZ by looking for the closest cortical cell with a longer length than the average cell length of 10 cells after the cortical cell closest to the epidermal cell with the first root-hair bulge in these three ecotypes. In Col-0 and Ws this cell is four cells above the one with the root hair bulge and, in the Ler ecotype, this cell is five cells above. To unambiguously identifying the site at which cells stop elongating and attain their final length and fate at the MZ, we propose to calculate the length of completely elongated cortical cells

Structural record of Lower Miocene westward motion of the Alboran Domain in the Western Betics, Spain

NASA Astrophysics Data System (ADS)

Frasca, Gianluca; Gueydan, Frédéric; Brun, Jean-Pierre

2015-08-01

In the framework of the Africa-Europe convergence, the Mediterranean system presents a complex interaction between subduction rollback and upper-plate deformation during the Tertiary. The western end of the system shows a narrow arcuate geometry across the Gibraltar arc, the Betic-Rif belt, in which the relationship between slab dynamics and surface tectonics is not well understood. The present study focuses on the Western Betics, which is characterized by two major thrusts: 1) the Internal/External Zone Boundary limits the metamorphic domain (Alboran Domain) from the fold-and-thrust belts in the External Zone; 2) the Ronda Peridotites Thrust allows the juxtaposition of a strongly attenuated lithosphere section with large bodies of sub-continental mantle rocks on top of upper crustal rocks. New structural data show that two major E-W strike-slip corridors played a major role in the deformation pattern of the Alboran Domain, in which E-W dextral strike-slip faults, N60° thrusts and N140° normal faults developed simultaneously during dextral strike-slip simple shear. Olistostromic sediments of Lower Miocene age were deposited and deformed in this tectonic context and hence provide an age estimate for the inferred continuous westward translation of the Alboran Domain that is accommodated by an E-W lateral (strike-slip) ramp and a N60° frontal thrust. The crustal emplacement of large bodies of sub-continental mantle may occur at the onset of this westward thrusting in the Western Alboran domain. At lithosphere-scale, we interpret the observed deformation pattern as the subduction upper-plate expression of a lateral slab tear and its westward propagation since the Lower Miocene.

Prioritisation of associations between protein domains and complex diseases using domain-domain interaction networks.

PubMed

Wang, W; Zhang, W; Jiang, R; Luan, Y

2010-05-01

It is of vital importance to find genetic variants that underlie human complex diseases and locate genes that are responsible for these diseases. Since proteins are typically composed of several structural domains, it is reasonable to assume that harmful genetic variants may alter structures of protein domains, affect functions of proteins and eventually cause disorders. With this understanding, the authors explore the possibility of recovering associations between protein domains and complex diseases. The authors define associations between protein domains and disease families on the basis of associations between non-synonymous single nucleotide polymorphisms (nsSNPs) and complex diseases, similarities between diseases, and relations between proteins and domains. Based on a domain-domain interaction network, the authors propose a 'guilt-by-proximity' principle to rank candidate domains according to their average distance to a set of seed domains in the domain-domain interaction network. The authors validate the method through large-scale cross-validation experiments on simulated linkage intervals, random controls and the whole genome. Results show that areas under receiver operating characteristic curves (AUC scores) can be as high as 77.90%, and the mean rank ratios can be as low as 21.82%. The authors further offer a freely accessible web interface for a genome-wide landscape of associations between domains and disease families.

Modeling Mantle Shear Zones, Melt Focusing and Stagnation - Are Non Volcanic Margins Really Magma Poor?

NASA Astrophysics Data System (ADS)

Lavier, L. L.; Muntener, O.

2011-12-01

Mantle peridotites from ocean-continent transition zones (OCT's) and ultraslow spreading ridges question the commonly held assumption of a simple link between mantle melting and MORB. 'Ancient' and partly refertilized mantle in rifts and ridges illustrates the distribution of the scale of upper mantle heterogeneity even on a local scale. Upwelling of partial melts that enter the conductive lithospheric mantle inevitably leads to freezing of the melt and metasomatized lithosphere. Field data and petrology demonstrates that ancient, thermally undisturbed, pyroxenite-veined subcontinental mantle blobs formed parts of the ocean floor next to thinned continental crust. Similar heterogeneity might be created in the oceanic lithosphere where the thermal boundary layer (TBM) is thick and veined with metasomatic assemblages. This cold, ancient, 'subcontinental domain' is separated by ductile shear zones (or some other form of permeability barriers) from an infiltrated ('hot') domain dominated by refertilized spinel and/or plagioclase peridotite. The footwall of these mantle shear zones display complex refertilization processes and high-temperature deformation. We present numerical models that illustrate the complex interplay of km-scale refertilization with active deformation and melt focusing on top of the mantle. Melt lubricated shear zones focus melt flow in shear fractures (melt bands) occurring along grain boundaries. Continuous uplift and cooling leads to crystallization, and crystal plastic deformation prevails in the subsolidus state. Below 800oC if water is present deformation by shearing of phyllosilicates may become prevalent. We develop physical boundary conditions for which stagnant melt beneath a permeability barrier remains trapped rather than being extracted to the surface via melt-filled fractures. We explore the parameter space for fracturing and drainage and development of anastomozing impermeable shear zones. Our models might be useful to constrain the

Domino structures evolution in strike-slip shear zones; the importance of the cataclastic flow

NASA Astrophysics Data System (ADS)

Moreira, N.; Dias, R.

2018-05-01

The Porto-Tomar-Ferreira do Alentejo dextral Shear Zone is one of the most important structures of the Iberian Variscides. In its vicinity, close to Abrantes (Central Portugal), a localized heterogeneous strain pattern developed in a decimetric metamorphic siliceous multilayer. This complex pattern was induced by the D2 dextral shearing of the early S0//S1 foliation in brittle-ductile conditions, giving rise to three main shear zone families. One of these families, with antithetic kinematics, delimits blocks with rigid clockwise rotation surrounded by coeval cataclasites, generating a local domino structure. The proposed geometrical and kinematic analysis, coupled with statistical studies, highlights the relation between subsidiary shear zones and the main shear zone. Despite the heterogeneous strain pattern, a quantitative approach of finite strain was applied based on the restoration of the initial fracture pattern. This approach shows the importance of the cataclastic flow coupled with the translational displacement of the domino domain in solving space problems related to the rigid block rotation. Such processes are key in allowing the rigid block rotation inside shear zones whenever the simple shear component is a fundamental mechanism.

A new time domain random walk method for solute transport in 1-D heterogeneous media

DOE Office of Scientific and Technical Information (OSTI.GOV)

Banton, O.; Delay, F.; Porel, G.

A new method to simulate solute transport in 1-D heterogeneous media is presented. This time domain random walk method (TDRW), similar in concept to the classical random walk method, calculates the arrival time of a particle cloud at a given location (directly providing the solute breakthrough curve). The main advantage of the method is that the restrictions on the space increments and the time steps which exist with the finite differences and random walk methods are avoided. In a homogeneous zone, the breakthrough curve (BTC) can be calculated directly at a given distance using a few hundred particles or directlymore » at the boundary of the zone. Comparisons with analytical solutions and with the classical random walk method show the reliability of this method. The velocity and dispersivity calculated from the simulated results agree within two percent with the values used as input in the model. For contrasted heterogeneous media, the random walk can generate high numerical dispersion, while the time domain approach does not.« less

Crustal structure in high deformation zones: Insights from gravimetric and magnetometric studies in the Guacha Corral shear zone (Eastern Sierras Pampeanas, Argentina)

NASA Astrophysics Data System (ADS)

Radice, Stefania; Lince Klinger, Federico; Maffini, M. Natalia; Pinotti, Lucio P.; Demartis, Manuel; D´Eramo, Fernando J.; Giménez, Mario; Coniglio, Jorge E.

2018-03-01

The Guacha Corral shear zone (GCSZ) is represented by mylonites that were developed under amphibolites facies conditions from migmatitic protoliths. In this contribution, geophysical, petrological and structural data were combined to determine the 3D geometry of the GCSZ. New gravimetric, magnetometric and structural studies, along an E-W profile, were integrated with existing magnetotelluric and seismological data from a representative regional database of the Eastern Sierras Pampeanas. The zonation of different fabrics across the GCSZ suggests that the pre-existing heterogeneities of the protoliths played a key role in governing the degree of metamorphism of different regions. The low gravity anomalies observed in the GCSZ suggest a transitional boundary zone between the migmatitic and mylonitic domains, where highly deformed shear bands are interspersed with undeformed rocks, presenting gradual contacts. The mylonites in this shear zone show a considerably reduced density when compared to the migmatite protoliths. The density of the rocks gradually increases with depth until it reaches that of the protolith. These changes in the gravity values in response to density changes allowed us to infer a listric geometry at depth of the GCSZ. Low gravity anomalies in the profiles, in regions where high density rocks (migmatites) outcrop at the surface, modeled as buried granitic plutons.

Vadose zone microbiology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kieft, Thomas L.; Brockman, Fred J.

2001-01-17

The vadose zone is defined as the portion of the terrestrial subsurface that extends from the land surface downward to the water table. As such, it comprises the surface soil (the rooting zone), the underlying subsoil, and the capillary fringe that directly overlies the water table. The unsaturated zone between the rooting zone and the capillary fringe is termed the "intermediate zone" (Chapelle, 1993). The vadose zone has also been defined as the unsaturated zone, since the sediment pores and/or rock fractures are generally not completely water filled, but instead contain both water and air. The latter characteristic results inmore » the term "zone of aeration" to describe the vadose zone. The terms "vadose zone," "unsaturated zone", and "zone of aeration" are nearly synonymous, except that the vadose zone may contain regions of perched water that are actually saturated. The term "subsoil" has also been used for studies of shallow areas of the subsurface immediately below the rooting zone. This review focuses almost exclusively on the unsaturated region beneath the soil layer since there is already an extensive body of literature on surface soil microbial communities and process, e.g., Paul and Clark (1989), Metting (1993), Richter and Markowitz, (1995), and Sylvia et al. (1998); whereas the deeper strata of the unsaturated zone have only recently come under scrutiny for their microbiological properties.« less

Spred1, a negative regulator of Ras–MAPK–ERK, is enriched in CNS germinal zones, dampens NSC proliferation, and maintains ventricular zone structure

PubMed Central

Phoenix, Timothy N.; Temple, Sally

2010-01-01

Neural stem cells (NSCs) have great potential for self-renewal, which must be tightly regulated to generate appropriate cell numbers during development and to prevent tumor formation. The Ras–MAPK–ERK pathway affects mitogen-stimulated proliferation, and negative regulators are likely to be important for keeping self-renewal in check. Sprouty-related protein with an EVH1 domain (Spred1) is a recently discovered negative Ras–MAPK–ERK regulator linked to a neurofibromatosis 1 (NF-1)-like human syndrome; however, its role in CNS development has not been explored. We show that Spred1 is highly enriched in CNS germinal zones during neurogenesis. Spred1 knockdown increases NSC self-renewal and progenitor proliferation cell-autonomously, and overexpression causes premature differentiation. Surprisingly, Spred1 knockdown in vivo in the embryonic mouse forebrain frequently resulted in periventricular heterotopia, developmental abnormalities often associated with mutations in genes in the vesicular trafficking pathway that cause disruption of germinal zones and impair cell migration. In cortical progenitor cells, Spred1 localizes within distinct vesicles, indicating a potential role in transport. Spred1 knockdown gradually leads to disruption of the apical ventricular zone and loss of radial glia alignment. This impairs late neuronal migration, resulting in the formation of periventricular masses. Thus, Spred1 is critical for normal cortical development, as it modulates progenitor self-renewal/proliferation and helps maintain the integrity and organization of germinal zones. PMID:20047999

Characterizing leachate contamination in a landfill site using Time Domain Electromagnetic (TDEM) imaging

NASA Astrophysics Data System (ADS)

Baawain, Mahad S.; Al-Futaisi, Ahmed M.; Ebrahimi, A.; Omidvarborna, Hamid

2018-04-01

Time Domain Electromagnetic (TDEM) survey as well as drilling investigations were conducted to identify possible contamination of a dumping site in an unsaturated zone located in Barka, Oman. The method was applied to evaluate conductivity of the contaminated plumes in hot and arid/semiarid region, where high temperatures commonly ranged between 35 and 50 °C. The drilling investigation was carried out over the survey area to verify the geophysical results. The low-resistivity zone (<80 Ωm), encountered near the subsurface, indicated plume migration caused by liquid waste disposal activities. The combination of TDEM survey results with the lithology of piezometers showed that higher resistivity (>90 Ωm) was correlated with compacted or cemented gravels and cobbles, particularly that of medium dense to very dense gravels and cobbles. Additionally, the TDEM profiles suggested that the plume migration followed a preferential flow path. The resistivity range 40-80 Ωm considered as contaminated areas; however, the drilling results showed the close resistivity domain in the depth >70 m below water table for some profiles (BL1, BL2, BL3, BL4 and BL5). The combined results of drilling wells, piezometers, and TDEM apparent resistivity maps showed a coincidence of the migrated leachate plume and water table. Predicted zone of the probable contamination was located at the depth of around 65 m and horizontal offset ranges 0-280 m, 80-240 m, and 40-85 m in the sounding traverses of BL4, BL6 and BL7, respectively.

Safety Zones

EPA Pesticide Factsheets

These are established primarily to reduce the accidental spread of hazardous substances by workers or equipment from contaminated areas to clean areas. They include the exclusion (hot) zone, contamination reduction (warm) zone, and support (cold) zone.

Evolution of a Subduction Zone

NASA Astrophysics Data System (ADS)

Noack, Lena; Van Hoolst, Tim; Dehant, Veronique

2014-05-01

The purpose of this study is to understand how Earth's surface might have evolved with time and to examine in a more general way the initiation and continuance of subduction zones and the possible formation of continents on an Earth-like planet. Plate tectonics and continents seem to influence the likelihood of a planet to harbour life, and both are strongly influenced by the planetary interior (e.g. mantle temperature and rheology) and surface conditions (e.g. stabilizing effect of continents, atmospheric temperature), but may also depend on the biosphere. Employing the Fortran convection code CHIC (developed at the Royal Observatory of Belgium), we simulate a subduction zone with a pre-defined weak zone (between oceanic and continental crust) and a fixed plate velocity for the subducting oceanic plate (Quinquis et al. in preparation). In our study we first investigate the main factors that influence the subduction process. We simulate the subduction of an oceanic plate beneath a continental plate (Noack et al., 2013). The crust is separated into an upper crust and a lower crust. We apply mixed Newtonian/non-Newtonian rheology and vary the parameters that are most likely to influence the subduction of the ocanic plate, as for example density of the crust/mantle, surface temperature, plate velocity and subduction angle. The second part of our study concentrates on the long-term evolution of a subduction zone. Even though we model only the upper mantle (until a depth of 670km), the subducted crust is allowed to flow into the lower mantle, where it is no longer subject to our investigation. This way we can model the subduction zone over long time spans, for which we assume a continuous inflow of the oceanic plate into the investigated domain. We include variations in mantle temperatures (via secular cooling and decay of radioactive heat sources) and dehydration of silicates (leading to stiffening of the material). We investigate how the mantle environment influences

Subduction obliquity as a prime indicator for geotherm in subduction zone

NASA Astrophysics Data System (ADS)

Plunder, Alexis; Thieulot, Cédric; van Hinsbergen, Douwe

2016-04-01

The geotherm of a subduction zone is thought to vary as a function of subduction rate and the age of the subducting lithosphere. Along a single subduction zone the rate of subduction can strongly vary due to changes in the angle between the trench and the plate convergence vector, namely the subduction obliquity. This phenomenon is observed all around the Pacific (i.e., Marianna, South America, Aleutian…). However due to observed differences in subducting lithosphere age or lateral convergence rate in nature, the quantification of temperature variation due to obliquity is not obvious. In order to investigate this effect, 3D generic numerical models were carried out using the finite element code ELEFANT. We designed a simplified setup to avoid interaction with other parameters. An ocean/ocean subduction setting was chosen and the domain is represented by a 800 × 300 × 200 km Cartesian box. The trench geometry is prescribed by means of a simple arc-tangent function. Velocity of the subducting lithosphere is prescribed using the analytical solution for corner flow and only the energy conservation equation is solved in the domain. Results are analysed after steady state is reached. First results show that the effect of the trench curvature on the geotherm with respect to the convergence direction is not negligible. A small obliquity yields isotherms which are very slightly deflected upwards where the obliquity is maximum. With an angle of ˜30°, the isotherms are deflected upwards of about 10 kilometres. Strong obliquity (i.e., angles from 60° to almost 90°) reveal extreme effects of the position of the isotherms. Further model will include other parameter as the dip of the slab and convergence rate to highlight their relative influence on the geotherm of subduction zone.

A lane line segmentation algorithm based on adaptive threshold and connected domain theory

NASA Astrophysics Data System (ADS)

Feng, Hui; Xu, Guo-sheng; Han, Yi; Liu, Yang

2018-04-01

Before detecting cracks and repairs on road lanes, it's necessary to eliminate the influence of lane lines on the recognition result in road lane images. Aiming at the problems caused by lane lines, an image segmentation algorithm based on adaptive threshold and connected domain is proposed. First, by analyzing features like grey level distribution and the illumination of the images, the algorithm uses Hough transform to divide the images into different sections and convert them into binary images separately. It then uses the connected domain theory to amend the outcome of segmentation, remove noises and fill the interior zone of lane lines. Experiments have proved that this method could eliminate the influence of illumination and lane line abrasion, removing noises thoroughly while maintaining high segmentation precision.

Fuel conditioning facility zone-to-zone transfer administrative controls.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pope, C. L.

2000-06-21

The administrative controls associated with transferring containers from one criticality hazard control zone to another in the Argonne National Laboratory (ANL) Fuel Conditioning Facility (FCF) are described. FCF, located at the ANL-West site near Idaho Falls, Idaho, is used to remotely process spent sodium bonded metallic fuel for disposition. The process involves nearly forty widely varying material forms and types, over fifty specific use container types, and over thirty distinct zones where work activities occur. During 1999, over five thousand transfers from one zone to another were conducted. Limits are placed on mass, material form and type, and container typesmore » for each zone. Ml material and containers are tracked using the Mass Tracking System (MTG). The MTG uses an Oracle database and numerous applications to manage the database. The database stores information specific to the process, including material composition and mass, container identification number and mass, transfer history, and the operators involved in each transfer. The process is controlled using written procedures which specify the zone, containers, and material involved in a task. Transferring a container from one zone to another is called a zone-to-zone transfer (ZZT). ZZTs consist of four distinct phases, select, request, identify, and completion.« less

Domain atrophy creates rare cases of functional partial protein domains.

PubMed

Prakash, Ananth; Bateman, Alex

2015-04-30

Protein domains display a range of structural diversity, with numerous additions and deletions of secondary structural elements between related domains. We have observed a small number of cases of surprising large-scale deletions of core elements of structural domains. We propose a new concept called domain atrophy, where protein domains lose a significant number of core structural elements. Here, we implement a new pipeline to systematically identify new cases of domain atrophy across all known protein sequences. The output of this pipeline was carefully checked by hand, which filtered out partial domain instances that were unlikely to represent true domain atrophy due to misannotations or un-annotated sequence fragments. We identify 75 cases of domain atrophy, of which eight cases are found in a three-dimensional protein structure and 67 cases have been inferred based on mapping to a known homologous structure. Domains with structural variations include ancient folds such as the TIM-barrel and Rossmann folds. Most of these domains are observed to show structural loss that does not affect their functional sites. Our analysis has significantly increased the known cases of domain atrophy. We discuss specific instances of domain atrophy and see that there has often been a compensatory mechanism that helps to maintain the stability of the partial domain. Our study indicates that although domain atrophy is an extremely rare phenomenon, protein domains under certain circumstances can tolerate extreme mutations giving rise to partial, but functional, domains.

Flow-path textures and mineralogy in tuffs of the unsaturated zone

USGS Publications Warehouse

Levy, Schön; Chipera, Steve; WoldeGabriel, Giday; Fabryka-Martin, June; Roach, Jeffrey; Sweetkind, Donald S.; Haneberg, William C.; Mozley, Peter S.; Moore, J. Casey; Goodwin, Laurel B.

1999-01-01

The high concentration of chlorine-36 (36Cl) produced by above-ground nuclear tests (bomb-pulse) provides a fortuitous tracer for infiltration during the last 50 years, and is used to detect fast flow in the unsaturated zone at Yucca Mountain, Nevada, a thick deposit of welded and nonwelded tuffs. Evidence of fast flow as much as 300 m into the mountain has been found in several zones in a 7.7-km tunnel. Many zones are associated with faults that provide continuous fracture flow paths from the surface. In the Sundance fault zone, water with the bomb-pulse signature has moved into subsidiary fractures and breccia zones. We found no highly distinctive mineralogic associations of fault and fracture samples containing bomb-pulse 36Cl. Bomb-pulse sites are slightly more likely to have calcite deposits than are non-bomb-pulse sites. Most other mineralogic and textural associations of fast-flow paths reflect the structural processes leading to locally enhanced permeability rather than the effects of ground-water percolation. Water movement through the rock was investigated by isotopic analysis of paired samples representing breccia zones and fractured wall rock bounding the breccia zones. Where bomb-pulse 36Cl is present, the waters in bounding fractures and intergranular pores of the fast pathways are not in equilibrium with respect to the isotopic signal. In structural domains that have experienced extensional deformation, fluid flow within a breccia is equivalent to matrix flow in a particulate rock, whereas true fracture flow occurs along the boundaries of a breccia zone. Where shearing predominated over extension, the boundary between wall rock and breccia is rough and irregular with a tight wallrock/breccia contact. The absence of a gap between the breccia and the wall rock helps maintain fluid flow within the breccia instead of along the wallrock/breccia boundary, leading to higher 36Cl/Cl values in the breccia than in the wall rock.

Three-dimensional modeling of nitrate-N transport in vadose zone: Roles of soil heterogeneity and groundwater flux.

PubMed

Akbariyeh, Simin; Bartelt-Hunt, Shannon; Snow, Daniel; Li, Xu; Tang, Zhenghong; Li, Yusong

2018-04-01

Contamination of groundwater from nitrogen fertilizers in agricultural lands is an important environmental and water quality management issue. It is well recognized that in agriculturally intensive areas, fertilizers and pesticides may leach through the vadose zone and eventually reach groundwater. While numerical models are commonly used to simulate fate and transport of agricultural contaminants, few models have considered a controlled field work to investigate the influence of soil heterogeneity and groundwater flow on nitrate-N distribution in both root zone and deep vadose zone. In this work, a numerical model was developed to simulate nitrate-N transport and transformation beneath a center pivot-irrigated corn field on Nebraska Management System Evaluation area over a three-year period. The model was based on a realistic three-dimensional sediment lithology, as well as carefully controlled irrigation and fertilizer application plans. In parallel, a homogeneous soil domain, containing the major sediment type of the site (i.e. sandy loam), was developed to conduct the same water flow and nitrate-N leaching simulations. Simulated nitrate-N concentrations were compared with the monitored nitrate-N concentrations in 10 multi-level sampling wells over a three-year period. Although soil heterogeneity was mainly observed from top soil to 3 m below the surface, heterogeneity controlled the spatial distribution of nitrate-N concentration. Soil heterogeneity, however, has minimal impact on the total mass of nitrate-N in the domain. In the deeper saturated zone, short-term variations of nitrate-N concentration correlated with the groundwater level fluctuations. Copyright © 2018 Elsevier B.V. All rights reserved.

Three-dimensional modeling of nitrate-N transport in vadose zone: Roles of soil heterogeneity and groundwater flux

NASA Astrophysics Data System (ADS)

Akbariyeh, Simin; Bartelt-Hunt, Shannon; Snow, Daniel; Li, Xu; Tang, Zhenghong; Li, Yusong

2018-04-01

Contamination of groundwater from nitrogen fertilizers in agricultural lands is an important environmental and water quality management issue. It is well recognized that in agriculturally intensive areas, fertilizers and pesticides may leach through the vadose zone and eventually reach groundwater. While numerical models are commonly used to simulate fate and transport of agricultural contaminants, few models have considered a controlled field work to investigate the influence of soil heterogeneity and groundwater flow on nitrate-N distribution in both root zone and deep vadose zone. In this work, a numerical model was developed to simulate nitrate-N transport and transformation beneath a center pivot-irrigated corn field on Nebraska Management System Evaluation area over a three-year period. The model was based on a realistic three-dimensional sediment lithology, as well as carefully controlled irrigation and fertilizer application plans. In parallel, a homogeneous soil domain, containing the major sediment type of the site (i.e. sandy loam), was developed to conduct the same water flow and nitrate-N leaching simulations. Simulated nitrate-N concentrations were compared with the monitored nitrate-N concentrations in 10 multi-level sampling wells over a three-year period. Although soil heterogeneity was mainly observed from top soil to 3 m below the surface, heterogeneity controlled the spatial distribution of nitrate-N concentration. Soil heterogeneity, however, has minimal impact on the total mass of nitrate-N in the domain. In the deeper saturated zone, short-term variations of nitrate-N concentration correlated with the groundwater level fluctuations.

33 CFR 165.169 - Safety and Security Zones: New York Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 2 2014-07-01 2014-07-01 false Safety and Security Zones: New York Marine Inspection Zone and Captain of the Port Zone. 165.169 Section 165.169 Navigation and... Areas First Coast Guard District § 165.169 Safety and Security Zones: New York Marine Inspection Zone...

33 CFR 165.169 - Safety and Security Zones: New York Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Safety and Security Zones: New York Marine Inspection Zone and Captain of the Port Zone. 165.169 Section 165.169 Navigation and... Areas First Coast Guard District § 165.169 Safety and Security Zones: New York Marine Inspection Zone...

33 CFR 165.169 - Safety and Security Zones: New York Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Safety and Security Zones: New York Marine Inspection Zone and Captain of the Port Zone. 165.169 Section 165.169 Navigation and... Areas First Coast Guard District § 165.169 Safety and Security Zones: New York Marine Inspection Zone...

33 CFR 165.169 - Safety and Security Zones: New York Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 2 2012-07-01 2012-07-01 false Safety and Security Zones: New York Marine Inspection Zone and Captain of the Port Zone. 165.169 Section 165.169 Navigation and... Areas First Coast Guard District § 165.169 Safety and Security Zones: New York Marine Inspection Zone...

33 CFR 165.169 - Safety and Security Zones: New York Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false Safety and Security Zones: New York Marine Inspection Zone and Captain of the Port Zone. 165.169 Section 165.169 Navigation and... Areas First Coast Guard District § 165.169 Safety and Security Zones: New York Marine Inspection Zone...

Controls on Mixing-Dependent Denitrification in Hyporheic Zones

NASA Astrophysics Data System (ADS)

Hester, E. T.; Young, K. I.; Widdowson, M. A.

2013-12-01

Interaction of surface water and groundwater in hyporheic sediments of river systems is known to create unique biogeochemical conditions that can attenuate contaminants flowing downstream. Oxygen, carbon, and the contaminants themselves (e.g., excess nitrate) often advect together through the hyporheic zone from sources in surface water. However, the ability of the hyporheic zone to attenuate contaminants in upwelling groundwater plumes as they exit to rivers is less known. Such reactions may be more dependent on mixing of carbon and oxygen sources from surface water with contaminants from deeper groundwater. We simulated hyporheic flow cells and upwelling groundwater together with mixing-dependent denitrification of an upwelling nitrate plume in shallow riverbed sediments using MODFLOW and SEAM3D. For our first set of model scenarios, we set biogeochemical boundary conditions to be consistent with situations where only mixing-dependent denitrification occurred within the model domain. This occurred where dissolved organic carbon (DOC) advecting from surface water through hyporheic flow cells meets nitrate upwelling from deeper groundwater. This would be common where groundwater is affected by septic systems which contribute nitrate that upwells into streams that do not have significant nitrate sources from upstream. We conducted a sensitivity analysis that showed that mixing-dependent denitrification increased with parameters that increase mixing itself, such as the degree of heterogeneity of sediment hydraulic conductivity (K). Mixing-dependent denitrification also increased with certain biogeochemical boundary concentrations such as increasing DOC or decreasing dissolved oxygen (DO) advecting from surface water. For our second set of model scenarios, we set biogeochemical boundary conditions to be consistent with common situations where non-mixing-dependent denitrification also occurred within the model domain. For example, when nitrate concentrations are

A functional analysis of TOEFAZ1 uncovers protein domains essential for cytokinesis in Trypanosoma brucei.

PubMed

Sinclair-Davis, Amy N; McAllaster, Michael R; de Graffenried, Christopher L

2017-11-15

The parasite Trypanosoma brucei is highly polarized, including a flagellum that is attached along the cell surface by the flagellum attachment zone (FAZ). During cell division, the new FAZ positions the cleavage furrow, which ingresses from the anterior tip of the cell towards the posterior. We recently identified TOEFAZ1 (for 'Tip of the Extending FAZ protein 1') as an essential protein in trypanosome cytokinesis. Here, we analyzed the localization and function of TOEFAZ1 domains by performing overexpression and RNAi complementation experiments. TOEFAZ1 comprises three domains with separable functions: an N-terminal α-helical domain that may be involved in FAZ recruitment, a central intrinsically disordered domain that keeps the morphogenic kinase TbPLK at the new FAZ tip, and a C-terminal zinc finger domain necessary for TOEFAZ1 oligomerization. Both the N-terminal and C-terminal domains are essential for TOEFAZ1 function, but TbPLK retention at the FAZ is not necessary for cytokinesis. The feasibility of alternative cytokinetic pathways that do not employ TOEFAZ1 are also assessed. Our results show that TOEFAZ1 is a multimeric scaffold for recruiting proteins that control the timing and location of cleavage furrow ingression. © 2017. Published by The Company of Biologists Ltd.

Dynamical Generation of the Transition Zone in the Earth's Mantle

NASA Astrophysics Data System (ADS)

Hansen, U.; Stemmer, K.

2005-12-01

The internal structure of the Earth is made up by a series of layers, though it is unclear how many layers exist and if there are layers invisible to remote sensing techniques. The transition zone is likely to be a boundary layer separating the convective systems in the lower and upper mantle. It seems likely that currently there is some mass exchange across this boundary, rather than the two systems beeing strictly separated.a Double-diffusive convection(d.d.c) is a vital mechanism which can generate layered structure and may thus be an important mmical machinery behind the formation of the transition zone. Double-diffusive convection determines the dynamics of systems whose density is influenced by at least two components with different molecular diffusivities.In the mantle, composition and temperature play the role of those two components. By means of numerical experiments we demonstrate that under mantle relevant conditions d.d.c typically leads to the formation of a transition zone. The calculations encompass two- and three dimensional Cartesian geometries as well as fully 3D spherical domains. We have further included strongly temperature dependent viscosity and find that this leads to even more pronounced layering. In most cases a layered flow pattern emerges, where two layers with a transition zone in between resembles a quasistationary state. Thus, the transition zone can be the result of a self organization process of the convective flow in the mantle. The presence of a phase transition further helps to stabilize the boundary against overturning, even on a time scale on the order of the age of the Earth.

Applying a general triclinic transpression model to highly partitioned brittle-ductile shear zones: A case study from the Torcal de Antequera massif, external Betics, southern Spain

NASA Astrophysics Data System (ADS)

Díaz-Azpiroz, M.; Barcos, L.; Balanyá, J. C.; Fernández, C.; Expósito, I.; Czeck, D. M.

2014-11-01

Oblique convergence and subsequent transpression kinematics can be considered as the general situation in most convergent and strike-slip tectonic boundaries. To better understand such settings, progressively more complex kinematic models have been proposed, which need to be tested against natural shear zones using standardized procedures that minimise subjectivism. In this work, a protocol to test a general triclinic transpression model is applied to the Torcal de Antequera massif (TAM), an essentially brittle shear zone. Our results, given as kinematic parameters of the transpressive flow (transpression obliquity, ϕ; extrusion obliquity, υ; and kinematic vorticity number, Wk), suggest that the bulk triclinic transpressive flow imposed on the TAM was partitioned into two different flow fields, following a general partitioning type. As such, one flow field produced narrow structural domains located at the limits of the TAM, where mainly dextral strike-slip simple-shear-dominated transpression took place (Outer domains, ODs). In contrast, the remaining part of the bulk flow produced pure-shear-dominated dextral triclinic transpression at the inner part of the TAM (Inner domain, ID). A graphical method relating internal (ϕ, Wk) to far-field (dip of the shear zone boundary, δ; angle of oblique convergence, α) transpression parameters is proposed to obtain the theoretical horizontal velocity vector (V→), which in the case of the TAM, ranges between 099 and 118. These results support the applicability of kinematic models of triclinic transpression to brittle-ductile shear zones and the potential utility of the proposed protocol.

Nanopaleomagnetism of Meteoritic Fe-Ni: the Potential for Time-Resolved Remanence Records within the Cloudy Zone

NASA Astrophysics Data System (ADS)

Harrison, R. J.; Bryson, J. F.; Kasama, T.; Church, N. S.; Herrero Albillos, J.; Kronast, F.; Ghidini, M.; Redfern, S. A.; van der Laan, G.; Tyliszczak, T.

2013-12-01

Paleomagnetic signals recorded by meteorites provide compelling evidence that the liquid cores of differentiated asteroids generated magnetic dynamo fields. Here we argue that magnetic nanostructures unique to meteoritic Fe-Ni metal are capable of carrying a time-resolved record of asteroid dynamo activity, a prospect that could revolutionise our understanding of the thermochemical conditions of differentiated bodies in the early solar system. Using a combination of high-resolution magnetic imaging techniques (including electron holography, magnetic force microscopy, X-ray photoemission electron microscopy and scanning transmission X-ray microscopy) we reveal the origins of the dramatic changes in magnetic properties that are associated with the transition from kamacite - tetrataenite rim - cloudy zone - plessite, typical of Fe-Ni intergrowths. The cloudy zone is comprised of nanoscale islands of tetrataenite (FeNi) coherently intergrown with a hitherto unobserved soft magnetic phase (Fe3Ni). The tetrataenite island diameter decreases with increasing lateral distance from the tetrataenite rim. Exchange coupling between the hard tetrataenite islands and the soft matrix phase leads to an exchange spring effect that lowers the tetrataenite switching field and causes a systematic variation in microcoercivity throughout the cloudy zone. The cloudy zone displays a complex interlocking magnetic domain pattern caused by uniaxial single domain tetrataenite islands with easy axes distributed along all three of the possible <100> crystallographic orientations. The coarse and intermediate cloudy zones contain a random distribution of all three easy axes. The fine cloudy zone, on the other hand, contains one dominant easy axis direction. This easy axis distribution suggests that strong interaction fields (either magnetic or stress) were present in this region at the time of tetrataenite formation, which likely originated from the neighbouring plessite. The easy axis

NPHP4 controls ciliary trafficking of membrane proteins and large soluble proteins at the transition zone

PubMed Central

Awata, Junya; Takada, Saeko; Standley, Clive; Lechtreck, Karl F.; Bellvé, Karl D.; Pazour, Gregory J.; Fogarty, Kevin E.; Witman, George B.

2014-01-01

ABSTRACT The protein nephrocystin-4 (NPHP4) is widespread in ciliated organisms, and defects in NPHP4 cause nephronophthisis and blindness in humans. To learn more about the function of NPHP4, we have studied it in Chlamydomonas reinhardtii. NPHP4 is stably incorporated into the distal part of the flagellar transition zone, close to the membrane and distal to CEP290, another transition zone protein. Therefore, these two proteins, which are incorporated into the transition zone independently of each other, define different domains of the transition zone. An nphp4-null mutant forms flagella with nearly normal length, ultrastructure and intraflagellar transport. When fractions from isolated wild-type and nphp4 flagella were compared, few differences were observed between the axonemes, but the amounts of certain membrane proteins were greatly reduced in the mutant flagella, and cellular housekeeping proteins >50 kDa were no longer excluded from mutant flagella. Therefore, NPHP4 functions at the transition zone as an essential part of a barrier that regulates both membrane and soluble protein composition of flagella. The phenotypic consequences of NPHP4 mutations in humans likely follow from protein mislocalization due to defects in the transition zone barrier. PMID:25150219

Geothermal energy prospectivity of the Torrens Hinge Zone: evidence from new heat flow data

NASA Astrophysics Data System (ADS)

Matthews, Chris

2009-09-01

The Torrens Hinge Zone is a long but narrow (up to 40km wide) geological transition zone between the relatively stable Eastern Gawler Craton `Olympic Domain' to the west, and the sedimentary basin known as the Adelaide Geosyncline to the east. The author hypothesised from first principles that the Torrens Hinge Zone should be prospective for high geothermal gradients due to the likely presence of high heat flow and insulating cover rocks. A method to test this hypothesis was devised, which involved the determination of surface heat flow on a pattern grid using purpose-drilled wells, precision temperature logging and detailed thermal conductivity measurements. The results of this structured test have validated the hypothesis, with heat flow values over 90mW/m2 recorded in five of six wells drilled. With several kilometres thickness of moderate conductivity sediments overlying the crystalline basement in this region, predicted temperature at 5000m ranges between 200 and 300°C.

Development of Hydrologic Characterization Technology of Fault Zones (in Japanese; English)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Karasaki, Kenzi; Onishi, Tiemi; Wu, Yu-Shu

2008-03-31

Through an extensive literature survey we find that there is very limited amount of work on fault zone hydrology, particularly in the field using borehole testing. The common elements of a fault include a core, and damage zones. The core usually acts as a barrier to the flow across it, whereas the damage zone controls the flow either parallel to the strike or dip of a fault. In most of cases the damage zone isthe one that is controlling the flow in the fault zone and the surroundings. The permeability of damage zone is in the range of two tomore » three orders of magnitude higher than the protolith. The fault core can have permeability up to seven orders of magnitude lower than the damage zone. The fault types (normal, reverse, and strike-slip) by themselves do not appear to be a clear classifier of the hydrology of fault zones. However, there still remains a possibility that other additional geologic attributes and scaling relationships can be used to predict or bracket the range of hydrologic behavior of fault zones. AMT (Audio frequency Magneto Telluric) and seismic reflection techniques are often used to locate faults. Geochemical signatures and temperature distributions are often used to identify flow domains and/or directions. ALSM (Airborne Laser Swath Mapping) or LIDAR (Light Detection and Ranging) method may prove to be a powerful tool for identifying lineaments in place of the traditional photogrammetry. Nonetheless not much work has been done to characterize the hydrologic properties of faults by directly testing them using pump tests. There are some uncertainties involved in analyzing pressure transients of pump tests: both low permeability and high permeability faults exhibit similar pressure responses. A physically based conceptual and numerical model is presented for simulating fluid and heat flow and solute transport through fractured fault zones using a multiple-continuum medium approach. Data from the Horonobe URL site are analyzed to

Disequilibrium growth of olivine in mafic magmas revealed by phosphorus zoning patterns of olivine from mafic-ultramafic intrusions

NASA Astrophysics Data System (ADS)

Xing, Chang-Ming; Wang, Christina Yan; Tan, Wei

2017-12-01

Olivine from mafic-ultramafic intrusions rarely displays growth zoning in major and some minor elements, such as Fe, Mg and Ni, due to fast diffusion of these elements at high temperatures. These elements in olivine are thus not useful in deciphering magma chamber processes, such as magma convection, multiple injection and mixing. High-resolution X-ray elemental intensity mapping reveals distinct P zoning patterns of olivine from two mafic-ultramafic intrusions in SW China. Polyhedral olivine grains from lherzolite and dunite of the Abulangdang intrusion show P-rich dendrites similar to those observed in volcanic rocks. Rounded olivine grains from net-textured Fe-Ti oxide ores of the Baima layered intrusion have irregular P-rich patches/bands crosscut and interlocked by P-poor olivine domains. P-rich patches/bands contain 250 to 612 ppm P, much higher than P-poor olivine domains with 123 to 230 ppm P. In electron backscattered diffraction (EBSD) maps, P-rich patches/bands within a single olivine grain have the same crystallographic orientation, indicating that they were remnants of the same crystal. Thus, both P-rich patches/bands and P-poor olivine domains in the same grain show a disequilibrium texture and clearly record two-stage growth. The P-rich patches/bands are likely the remnants of a polyhedral olivine crystal that formed in the first stage, whereas the P-poor olivine domains containing rounded Ti-rich magnetite and Fe-rich melt inclusions may have formed from an Fe-rich ambient melt in the second stage. The complex P zoning of olivine can be attributed to the dissolution of early polyhedral olivine and re-precipitation from the Fe-rich ambient melt. The early polyhedral olivine was in chemical disequilibrium with the ambient melt that may have been developed by silicate liquid immiscibility in a crystal mush. Our study implies that olivine crystals in igneous cumulates with an equilibrium appearance may have experienced disequilibrium growth processes

WorkZoneQ user guide for two-lane freeway work zones.

DOT National Transportation Integrated Search

2013-06-01

WorkZoneQ was developed in Visual Basic for Applications (VBA) to implement the results of the previous study, : Queue and Users Costs in Highway Work Zones. This report contains the WorkZoneQ user guide. WorkZoneQ : consists of eight Excel ...

Molecular differences in transition zone and peripheral zone prostate tumors

PubMed Central

Sinnott, Jennifer A.; Rider, Jennifer R.; Carlsson, Jessica; Gerke, Travis; Tyekucheva, Svitlana; Penney, Kathryn L.; Sesso, Howard D.; Loda, Massimo; Fall, Katja; Stampfer, Meir J.; Mucci, Lorelei A.; Pawitan, Yudi; Andersson, Sven-Olof; Andrén, Ove

2015-01-01

Prostate tumors arise primarily in the peripheral zone (PZ) of the prostate, but 20–30% arise in the transition zone (TZ). Zone of origin may have prognostic value or reflect distinct molecular subtypes; however, it can be difficult to determine in practice. Using whole-genome gene expression, we built a signature of zone using normal tissue from five individuals and found that it successfully classified nine tumors of known zone. Hypothesizing that this signature captures tumor zone of origin, we assessed its relationship with clinical factors among 369 tumors of unknown zone from radical prostatectomies (RPs) and found that tumors that molecularly resembled TZ tumors showed lower mortality (P = 0.09) that was explained by lower Gleason scores (P = 0.009). We further applied the signature to an earlier study of 88 RP and 333 transurethral resection of the prostate (TURP) tumor samples, also of unknown zone, with gene expression on ~6000 genes. We had observed previously substantial expression differences between RP and TURP specimens, and hypothesized that this might be because RPs capture primarily PZ tumors, whereas TURPs capture more TZ tumors. Our signature distinguished these two groups, with an area under the receiver operating characteristic curve of 87% (P < 0.0001). Our findings that zonal differences in normal tissue persist in tumor tissue and that these differences are associated with Gleason score and sample type suggest that subtypes potentially resulting from different etiologic pathways might arise in these zones. Zone of origin may be important to consider in prostate tumor biomarker research. PMID:25870172

Spatial evolution of Zagros collision zone in Kurdistan, NW Iran: constraints on Arabia-Eurasia oblique convergence

NASA Astrophysics Data System (ADS)

Sadeghi, Shahriar; Yassaghi, Ali

2016-04-01

Stratigraphy, detailed structural mapping and a crustal-scale cross section across the NW Zagros collision zone provide constraints on the spatial evolution of oblique convergence of the Arabian and Eurasian plates since the Late Cretaceous. The Zagros collision zone in NW Iran consists of the internal Sanandaj-Sirjan, Gaveh Rud and Ophiolite zones and the external Bisotoun, Radiolarite and High Zagros zones. The Main Zagros Thrust is the major structure of the Zagros suture zone. Two stages of oblique deformation are recognized in the external part of the NW Zagros in Iran. In the early stage, coexisting dextral strike-slip and reverse dominated domains in the Radiolarite zone developed in response to deformation partitioning due to oblique convergence. Dextral-reverse faults in the Bisotoun zone are also compatible with oblique convergence. In the late stage, deformation partitioning occurred during southeastward propagation of the Zagros orogeny towards its foreland resulting in synchronous development of orogen-parallel strike-slip and thrust faults. It is proposed that the first stage was related to Late Cretaceous oblique obduction, while the second stage resulted from Cenozoic collision. The Cenozoic orogen-parallel strike-slip component of Zagros oblique convergence is not confined to the Zagros suture zone (Main Recent Fault) but also occurred in the external part (Marekhil-Ravansar fault system). Thus, it is proposed that oblique convergence of Arabian and Eurasian plates in Zagros collision zone initiated with oblique obduction in the Late Cretaceous followed by oblique collision in the late Tertiary, consistent with global plate reconstructions.

Fusion of Tomography Tests for DNAPL Source Zone Characterization: Technology Development and Validation

DTIC Science & Technology

2011-07-01

alternative to the REV and fracture network concepts, pp. 533-561, Rock Mechanics : Proceedings of the 28th U.S. Symposium, Tucson, Arizona, edited by I.W...spatially integrated measure of residual DNAPL volume in the flow without causing disturbances to the source zone domain [ Jin et al., 1995; Nelson and...step. 6 Hydrological inversion has been a major focus of groundwater hydrology during the last three decades [see Yeh, 1986; Sun , 1994 and

Application of plurigaussian simulation to delineate the layout of alteration domains in Sungun copper deposit

NASA Astrophysics Data System (ADS)

Talebi, Hassan; Asghari, Omid; Emery, Xavier

2013-12-01

An accurate estimation of mineral grades in ore deposits with heterogeneous spatial variations requires defining geological domains that differentiate the types of mineralogy, alteration and lithology. Deterministic models define the layout of the domains based on the interpretation of the drill holes and do not take into account the uncertainty in areas with fewer data. Plurigaussian simulation (PGS) can be an alternative to generate multiple numerical models of the ore body, with the aim of assessing the uncertainty in the domain boundaries and improving the geological controls in the characterization of quantitative attributes. This study addresses the application of PGS to Sungun porphyry copper deposit (Iran), in order to simulate the layout of four hypogene alteration zones: potassic, phyllic, propylitic and argillic. The aim of this study is to construct numerical models in which the alteration structures reflect the evolution observed in the geology.

Precambrian domains in Lithuania: evidence of terrane tectonics

NASA Astrophysics Data System (ADS)

Skridlaite, Grazina; Motuza, Gediminas

2001-09-01

The West Lithuanian Granulite (WLG) and East Lithuanian domains (ELD) form the Proterozoic basement of Lithuania and can be distinguished on the basis of differing structural patterns, lithologies, and evolutionary histories. They are juxtaposed along the Mid-Lithuanian Suture Zone (MLSZ). In the WLG, the main lithotectonic complexes comprise felsic and intermediate, mostly metasedimentary granulites in the south-west and mafic metaigneous granulites in the north-east. The former are interpreted as marine metapelites, while most of the mafic ones have been derived from island-arc tholeiites. These rock complexes trend NW-SE and are marked by contrasting gravity and magnetic anomalies. NE- and E-W-striking faults and shear zones complicate the potential-field patterns. Sets of NW-trending anomalies also extend from Lithuania across the Baltic Sea to south-central Sweden and indicate that the WLG complexes continue into the Baltic/Fennoscandian Shield. Voluminous anatectic granites alternate with the metapelites, whereas the mafic granulites occur together with enderbites and charnockites. In the ELD, the main structures produce strong, NNE-SSW-oriented gravity and magnetic anomalies which trend parallel to the Belarus-Baltic Granulite Belt (BBG) and other terranes situated still farther east. The ELD is composed of metasedimentary rocks interpreted as one-time graywackes, shales and dolomites accumulated in continental-margin arc and shallow-water basinal environments. Amphibolites and gabbros with MORB and IAT characteristics, and voluminous granitoids are also present. The coexistence of juvenile mafic rocks with continental-margin and shelf sediments suggests an oceanic back-arc setting. The two Lithuanian basement domains display contrasting metamorphic histories that suggest separate developments before the eventual amalgamation. In the WLG, the metapelites indicate peak metamorphism at high temperatures (up to 850-900°C) and moderate pressures (8-10 kbar

76 FR 63202 - Security Zones; Captain of the Port Lake Michigan Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2011-10-12

...-AA87 Security Zones; Captain of the Port Lake Michigan Zone AGENCY: Coast Guard, DHS. ACTION: Final rule. SUMMARY: Based on a review of safety and security zones around critical infrastructure in the... Chicago Harbor & Burnham Park Harbor--Safety and Security Zone regulation and the Security Zones; Captain...

33 CFR 165.911 - Security Zones; Captain of the Port Buffalo Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 2 2014-07-01 2014-07-01 false Security Zones; Captain of the Port Buffalo Zone. 165.911 Section 165.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Security Zones; Captain of the Port Buffalo Zone. (a) Location. The following are security zones: (1) Nine...

33 CFR 165.911 - Security Zones; Captain of the Port Buffalo Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false Security Zones; Captain of the Port Buffalo Zone. 165.911 Section 165.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Security Zones; Captain of the Port Buffalo Zone. (a) Location. The following are security zones: (1) Nine...

33 CFR 165.911 - Security Zones; Captain of the Port Buffalo Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Security Zones; Captain of the Port Buffalo Zone. 165.911 Section 165.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Security Zones; Captain of the Port Buffalo Zone. (a) Location. The following are security zones: (1) Nine...

33 CFR 165.911 - Security Zones; Captain of the Port Buffalo Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 2 2012-07-01 2012-07-01 false Security Zones; Captain of the Port Buffalo Zone. 165.911 Section 165.911 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF... Security Zones; Captain of the Port Buffalo Zone. (a) Location. The following are security zones: (1) Nine...

Structural Evolution of Transform Fault Zones in Thick Oceanic Crust of Iceland

NASA Astrophysics Data System (ADS)

Karson, J. A.; Brandsdottir, B.; Horst, A. J.; Farrell, J.

2017-12-01

Spreading centers in Iceland are offset from the regional trend of the Mid-Atlantic Ridge by the Tjörnes Fracture Zone (TFZ) in the north and the South Iceland Seismic Zone (SISZ) in the south. Rift propagation away from the center of the Iceland hotspot, has resulted in migration of these transform faults to the N and S, respectively. As they migrate, new transform faults develop in older crust between offset spreading centers. Active transform faults, and abandoned transform structures left in their wakes, show features that reflect different amounts (and durations) of slip that can be viewed as a series of snapshots of different stages of transform fault evolution in thick, oceanic crust. This crust has a highly anisotropic, spreading fabric with pervasive zones of weakness created by spreading-related normal faults, fissures and dike margins oriented parallel to the spreading centers where they formed. These structures have a strong influence on the mechanical properties of the crust. By integrating available data, we suggest a series of stages of transform development: 1) Formation of an oblique rift (or leaky transform) with magmatic centers, linked by bookshelf fault zones (antithetic strike-slip faults at a high angle to the spreading direction) (Grimsey Fault Zone, youngest part of the TFZ); 2) broad zone of conjugate faulting (tens of km) (Hreppar Block N of the SISZ); 3) narrower ( 20 km) zone of bookshelf faulting aligned with the spreading direction (SISZ); 4) mature, narrow ( 1 km) through-going transform fault zone bounded by deformation (bookshelf faulting and block rotations) distributed over 10 km to either side (Húsavík-Flatey Fault Zone in the TFZ). With progressive slip, the transform zone becomes progressively narrower and more closely aligned with the spreading direction. The transform and non-transform (beyond spreading centers) domains may be truncated by renewed propagation and separated by subsequent spreading. This perspective

AIDA: ab initio domain assembly for automated multi-domain protein structure prediction and domain–domain interaction prediction

PubMed Central

Xu, Dong; Jaroszewski, Lukasz; Li, Zhanwen; Godzik, Adam

2015-01-01

Motivation: Most proteins consist of multiple domains, independent structural and evolutionary units that are often reshuffled in genomic rearrangements to form new protein architectures. Template-based modeling methods can often detect homologous templates for individual domains, but templates that could be used to model the entire query protein are often not available. Results: We have developed a fast docking algorithm ab initio domain assembly (AIDA) for assembling multi-domain protein structures, guided by the ab initio folding potential. This approach can be extended to discontinuous domains (i.e. domains with ‘inserted’ domains). When tested on experimentally solved structures of multi-domain proteins, the relative domain positions were accurately found among top 5000 models in 86% of cases. AIDA server can use domain assignments provided by the user or predict them from the provided sequence. The latter approach is particularly useful for automated protein structure prediction servers. The blind test consisting of 95 CASP10 targets shows that domain boundaries could be successfully determined for 97% of targets. Availability and implementation: The AIDA package as well as the benchmark sets used here are available for download at http://ffas.burnham.org/AIDA/. Contact: adam@sanfordburnham.org Supplementary information: Supplementary data are available at Bioinformatics online. PMID:25701568

Acceleration spectra for subduction zone earthquakes

USGS Publications Warehouse

Boatwright, J.; Choy, G.L.

1989-01-01

We estimate the source spectra of shallow earthquakes from digital recordings of teleseismic P wave groups, that is, P+pP+sP, by making frequency dependent corrections for the attenuation and for the interference of the free surface. The correction for the interference of the free surface assumes that the earthquake radiates energy from a range of depths. We apply this spectral analysis to a set of 12 subduction zone earthquakes which range in size from Ms = 6.2 to 8.1, obtaining corrected P wave acceleration spectra on the frequency band from 0.01 to 2.0 Hz. Seismic moment estimates from surface waves and normal modes are used to extend these P wave spectra to the frequency band from 0.001 to 0.01 Hz. The acceleration spectra of large subduction zone earthquakes, that is, earthquakes whose seismic moments are greater than 1027 dyn cm, exhibit intermediate slopes where u(w)???w5/4 for frequencies from 0.005 to 0.05 Hz. For these earthquakes, spectral shape appears to be a discontinuous function of seismic moment. Using reasonable assumptions for the phase characteristics, we transform the spectral shape observed for large earthquakes into the time domain to fit Ekstrom's (1987) moment rate functions for the Ms=8.1 Michoacan earthquake of September 19, 1985, and the Ms=7.6 Michoacan aftershock of September 21, 1985. -from Authors

Inferring Domain-Domain Interactions from Protein-Protein Interactions with Formal Concept Analysis

PubMed Central

Khor, Susan

2014-01-01

Identifying reliable domain-domain interactions will increase our ability to predict novel protein-protein interactions, to unravel interactions in protein complexes, and thus gain more information about the function and behavior of genes. One of the challenges of identifying reliable domain-domain interactions is domain promiscuity. Promiscuous domains are domains that can occur in many domain architectures and are therefore found in many proteins. This becomes a problem for a method where the score of a domain-pair is the ratio between observed and expected frequencies because the protein-protein interaction network is sparse. As such, many protein-pairs will be non-interacting and domain-pairs with promiscuous domains will be penalized. This domain promiscuity challenge to the problem of inferring reliable domain-domain interactions from protein-protein interactions has been recognized, and a number of work-arounds have been proposed. This paper reports on an application of Formal Concept Analysis to this problem. It is found that the relationship between formal concepts provides a natural way for rare domains to elevate the rank of promiscuous domain-pairs and enrich highly ranked domain-pairs with reliable domain-domain interactions. This piggybacking of promiscuous domain-pairs onto less promiscuous domain-pairs is possible only with concept lattices whose attribute-labels are not reduced and is enhanced by the presence of proteins that comprise both promiscuous and rare domains. PMID:24586450

Creep cavitation bands control porosity and fluid flow in lower crustal shear zones

DOE Office of Scientific and Technical Information (OSTI.GOV)

Menegon, Luca; Fusseis, Florian; Stunitz, Holger

2015-03-01

Shear zones channelize fluid flow in Earth’s crust. However, little is known about deep crustal fluid migration and how fluids are channelized and distributed in a deforming lower crustal shear zone. This study investigates the deformation mechanisms, fluid-rock interaction, and development of porosity in a monzonite ultramylonite from Lofoten, northern Norway. The rock was deformed and transformed into an ultramylonite under lower crustal conditions (temperature = 700–730 °C, pressure = 0.65–0.8 GPa). The ultramylonite consists of feldspathic layers and domains of amphibole + quartz + calcite, which result from hydration reactions of magmatic clinopyroxene. The average grain size in bothmore » domains is <25 mm. Microstructural observations and electron backscatter diffraction analysis are consistent with diffusion creep as the dominant deformation mechanism in both domains. Festoons of isolated quartz grains define C'-type bands in feldspathic layers. These quartz grains do not show a crystallographic preferred orientation. The alignment of quartz grains is parallel to the preferred elongation of pores in the ultramylonites, as evidenced from synchrotron X-ray microtomography. Such C'-type bands are interpreted as creep cavitation bands resulting from diffusion creep deformation associated with grain boundary sliding. Mass-balance calculation indicates a 2% volume increase during the protolith-ultramylonite transformation, which is consistent with synkinematic formation of creep cavities producing dilatancy. Thus, this study presents evidence that creep cavitation bands may control deep crustal porosity and fluid flow. Nucleation of new phases in creep cavitation bands inhibits grain growth and enhances the activity of grain size–sensitive creep, thereby stabilizing strain localization in the polymineralic ultramylonites.« less

77 FR 50929 - Security Zones; 2012 RNC Bridge Security Zones, Captain of the Port St. Petersburg Zone, Tampa, FL

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-23

...-AA87 Security Zones; 2012 RNC Bridge Security Zones, Captain of the Port St. Petersburg Zone, Tampa, FL... temporary security zones around certain bridges on the waters of Pinellas County and Tampa Bay, Florida..., or mooring on waters within 50 yards of the designated bridges during the times that the security...

Potential field signatures along the Zagros collision zone in Iran

NASA Astrophysics Data System (ADS)

Abedi, Maysam; Fournier, Dominique; Devriese, Sarah G. R.; Oldenburg, Douglas W.

2018-01-01

The Zagros orogenic belt, known as an active fold-thrust belt, was formed in southwestern Iran due to the convergence of the Arabian and Eurasian plates. In this study, potential field data are inverted in 3D to image the variations of magnetic susceptibility and density contrast along the collision zone, resulting in better tectonic understanding of the studied region. Geophysical data measured by airborne magnetic and ground-based gravity systems are used to construct an integrated model that facilitates the interpretations of various tectonic zones across a 450-km line. This line intersects the main structural units from the SW portion of the Zagros belt. The constructed model reveals a contrast that indicates the transition between the two continental plates coinciding with the western boundaries of the Sanandaj-Sirjan Zone (SSZ) at the Main Zagros Thrust (MZT) fault. The subduction of the Arabian continental crust below the Iranian one is evident because of its lower susceptibility property and alternating sequence of high and low density regions. Higher susceptibility, magnetic remanence and density are the mainstays of the Urumieh-Dokhtar Magmatic Assemblage (UDMA) zone at the NE of the studied route, whereas lower values of these properties correspond to (1) the thin massive Tertiary-Neogene and Quaternary sediments of the central domain (CD) zone, and (2) the thick sedimentary and salt intrusion cover over the Zagros Fold-and-Thrust belt (ZFTB). Higher density of regions in the Arabian crust below the ZFTB implies that fault activities have caused significant vertical displacement of the basement. Finally, a simplified geological model is presented based upon the inversions of the geophysical data, in which the main geological units are divided along the studied route.

Slip Zone versus Damage Zone Micromechanics, Arima-Takasuki Tectonic Line, Japan

NASA Astrophysics Data System (ADS)

White, J. C.; Lin, A.

2017-12-01

The Arima-Takasuki Tectonic Line (ATTL) of southern Honshu, Japan is defined by historically active faults and multiple splays producing M7 earthquakes. The damage zone of the ATTL comprises a broad zone of crushed, comminuted and pulverized granite/rhyolite1,2containing cm-scale slip zones and highly comminuted injection veins. In this presentation, prior work on the ATTL fault rocks is extending to include microstructural characterization by transmission electron microscopy (TEM) from recent trenching of the primary slip zone, as well as secondary slip zones. This is necessary to adequately characterize the extremely fine-grained material (typically less than 1mm) in both damage and core zones. Damage zone material exhibits generally random textures3 whereas slip zones are macroscopically foliated, and compositionally layered, notwithstanding a fairly homogeneous protolith. The latter reflects fluid-rock interaction during both coseismic and interseismic periods. The slip zones are microstructurally heterogeneous at all scales, comprising not only cataclasites and phyllosilicate (clay)-rich gouge zones, but Fe/Mn pellets or clasts that are contained within gouge. These structures appear to have rolled and would suggest rapid recrystallization and/or growth. A central question related to earthquake recurrence along existing faults is the nature of the gouge. In both near-surface exposures and ongoing drilling at depth, "plastic" or "viscous" gouge zones comprise ultra-fine-grained clay-siliciclastic particles that would not necessarily respond in a simple frictional manner. Depending on whether the plastic nature of these slip zones develops during or after slip, subsequent focusing of slip within them could be complicated. 1 Mitchell, T.A., Ben-Zion, Y., Shimamoto, T., 2011. Ear. Planet. Sci. Lett. 308, 284-297. 2 Lin, A., Yamashita, K, Tanaka, M. J., 2013. Struc. Geol. 48, 3-13. 3 White, J.C., Lin, A. 2016. Proc. AGU Fall Mtg., T42-02 San Francisco.

Quantitative analysis of external limiting membrane, ellipsoid zone and interdigitation zone defects in patients with macular holes.

PubMed

Houly, Jacques Ramos; Veloso, Carlos Eduardo; Passos, Elke; Nehemy, Márcio Bittar

2017-07-01

To investigate the correlation between the length of external limiting membrane (ELM), ellipsoid zone (EZ) and interdigitation zone (IZ) defects and visual prognosis in patients undergoing macular hole (MH) surgery, using spectral-domain optical coherence tomography (SD-OCT). This is a retrospective, consecutive, observational case series study. Fifty-two eyes of 52 patients with primary MH were evaluated. A quantitative analysis of ELM, EZ and IZ defects was performed preoperatively and at 3 and 6 months postoperatively using SD-OCT. The correlation between pre- and postoperative ELM, EZ and IZ defects and the best-corrected visual acuity (BCVA) was investigated. The lengths of ELM, EZ and IZ defects correlated significantly with BCVA in each study period (P < 0.001). Preoperative measures of these band defects were also associated with visual outcomes 3 and 6 months after surgery (P < 0.05). Considering all preoperative parameters, the length of the ELM defect was the factor most strongly correlated with BCVA at 6 months (β = 0.643, P < 0.012). The integrity of the ELM was the only factor significantly associated with BCVA at 6 months (β = 0.427; P = 0.004). The preoperative length of the ELM defect is the strongest predictor of visual acuity after MH surgery. Postoperative integrity of the ELM is significantly associated with visual restoration after surgical treatment of MH.

Evaluation of Ohio work zone speed zones process.

DOT National Transportation Integrated Search

2014-06-01

This report describes the methodology and results of analyses performed to determine the effectiveness of Ohio Department of Transportation processes for establishing work zone speed zones. Researchers observed motorists speed choice upstream of a...

Replication domains are self-interacting structural chromatin units of human chromosomes

NASA Astrophysics Data System (ADS)

Arneodo, Alain

2011-03-01

In higher eukaryotes, the absence of specific sequence motifs marking the origins of replication has been a serious hindrance to the understanding of the mechanisms that regulate the initiation and the maintenance of the replication program in different cell types. In silico analysis of nucleotide compositional skew has predicted the existence, in the germline, of replication N-domains bordered by putative replication origins and where the skew decreases rather linearly as the signature of a progressive inversion of the average fork polarity. Here, from the demonstration that the average fork polarity can be directly extracted from the derivative of replication timing profiles, we develop a wavelet-based pattern recognition methodology to delineate replication U-domains where the replication timing profile is shaped as a U and its derivative as a N. Replication U-domains are robustly found in seven cell lines as covering a significant portion (40-50%) of the human genome where the replication timing data actually displays some plasticity between cell lines. The early replication initiation zones at U-domains borders are found to be hypersensitive to DNase I cleavage, to be associated with transcriptional activity and to present a significant enrichment in insular-binding proteins CTCF, the hallmark of an open chromatin structure. A comparative analysis of genome-wide chromatin interaction (HiC) data shows that replication-U domains correspond to self-interacting structural high order chromatin units of megabase characteristic size. Taken together, these findings provide evidence that the epigenetic compartmentalization of the human genome into autonomous replication U-domains comes along with an extensive remodelling of the threedimensional chromosome architecture during development or in specific diseases. The observed cell specific conservation of the replication timing between the human and mouse genomes strongly suggests that this chromosome organization into

Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines

PubMed Central

2010-01-01

Background Protein-protein interaction (PPI) plays essential roles in cellular functions. The cost, time and other limitations associated with the current experimental methods have motivated the development of computational methods for predicting PPIs. As protein interactions generally occur via domains instead of the whole molecules, predicting domain-domain interaction (DDI) is an important step toward PPI prediction. Computational methods developed so far have utilized information from various sources at different levels, from primary sequences, to molecular structures, to evolutionary profiles. Results In this paper, we propose a computational method to predict DDI using support vector machines (SVMs), based on domains represented as interaction profile hidden Markov models (ipHMM) where interacting residues in domains are explicitly modeled according to the three dimensional structural information available at the Protein Data Bank (PDB). Features about the domains are extracted first as the Fisher scores derived from the ipHMM and then selected using singular value decomposition (SVD). Domain pairs are represented by concatenating their selected feature vectors, and classified by a support vector machine trained on these feature vectors. The method is tested by leave-one-out cross validation experiments with a set of interacting protein pairs adopted from the 3DID database. The prediction accuracy has shown significant improvement as compared to InterPreTS (Interaction Prediction through Tertiary Structure), an existing method for PPI prediction that also uses the sequences and complexes of known 3D structure. Conclusions We show that domain-domain interaction prediction can be significantly enhanced by exploiting information inherent in the domain profiles via feature selection based on Fisher scores, singular value decomposition and supervised learning based on support vector machines. Datasets and source code are freely available on the web at http

Investigating the development of less-mobile porosity in realistic hyporheic zone sediments with COMSOL Multiphysics

NASA Astrophysics Data System (ADS)

MahmoodPoorDehkordy, F.; Briggs, M. A.; Day-Lewis, F. D.; Bagtzoglou, A. C.

2017-12-01

Although hyporheic zones are often modeled at the reach scale as homogeneous "boxes" of exchange, heterogeneity caused by variations of pore sizes and connectivity is not uncommon. This heterogeneity leads to the creation of more- and less-mobile zones of hydraulic exchange that influence reactive solute transport processes. Whereas fluid sampling is generally sensitive to more-mobile zones, geoelectrical measurement is sensitive to ionic tracer dynamics in both less- and more-mobile zones. Heterogeneity in pore connectivity leads to a lag between fluid and bulk electrical conductivity (EC) resulting in a hysteresis loop, observed during tracer breakthrough tests, that contains information about the less-mobile porosity attributes of the medium. Here, we present a macro-scale model of solute transport and electrical conduction developed using COMSOL Multiphysics. The model is used to simulate geoelectrical monitoring of ionic transport for bed sediments based on (1) a stochastic sand-and-cobble mixture and (2) a dune feature with strong permeability layering. In both of these disparate sediment types, hysteresis between fluid and bulk EC is observed, and depends in part on fluid flux rate through the model domain. Using the hysteresis loop, the ratio of less-mobile to mobile porosity and mass-transfer coefficient are estimated graphically. The results indicate the presence and significance of less-mobile porosity in the hyporheic zones and demonstrate the capability of the proposed model to detect heterogeneity in flow processes and estimate less-mobile zone parameters.

Megabase replication domains along the human genome: relation to chromatin structure and genome organisation.

PubMed

Audit, Benjamin; Zaghloul, Lamia; Baker, Antoine; Arneodo, Alain; Chen, Chun-Long; d'Aubenton-Carafa, Yves; Thermes, Claude

2013-01-01

In higher eukaryotes, the absence of specific sequence motifs, marking the origins of replication has been a serious hindrance to the understanding of (i) the mechanisms that regulate the spatio-temporal replication program, and (ii) the links between origins activation, chromatin structure and transcription. In this chapter, we review the partitioning of the human genome into megabased-size replication domains delineated as N-shaped motifs in the strand compositional asymmetry profiles. They collectively span 28.3% of the genome and are bordered by more than 1,000 putative replication origins. We recapitulate the comparison of this partition of the human genome with high-resolution experimental data that confirms that replication domain borders are likely to be preferential replication initiation zones in the germline. In addition, we highlight the specific distribution of experimental and numerical chromatin marks along replication domains. Domain borders correspond to particular open chromatin regions, possibly encoded in the DNA sequence, and around which replication and transcription are highly coordinated. These regions also present a high evolutionary breakpoint density, suggesting that susceptibility to breakage might be linked to local open chromatin fiber state. Altogether, this chapter presents a compartmentalization of the human genome into replication domains that are landmarks of the human genome organization and are likely to play a key role in genome dynamics during evolution and in pathological situations.

33 CFR 165.154 - Safety and Security Zones; Captain of the Port Long Island Sound Zone Safety and Security Zones.

Code of Federal Regulations, 2012 CFR

2012-07-01

...; Captain of the Port Long Island Sound Zone Safety and Security Zones. 165.154 Section 165.154 Navigation... Long Island Sound Zone Safety and Security Zones. The following areas are designated safety and... navigable waters of Long Island Sound, from surface to bottom, North and Northeast of a line running from...

33 CFR 165.154 - Safety and Security Zones: Long Island Sound Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Island Sound Marine Inspection Zone and Captain of the Port Zone. 165.154 Section 165.154 Navigation and... Areas First Coast Guard District § 165.154 Safety and Security Zones: Long Island Sound Marine... this zone is prohibited unless authorized by the Captain of the Port Long, Island Sound. (3) All...

Continuous Record of Permeability inside the Wenchuan Earthquake Fault Zone

NASA Astrophysics Data System (ADS)

Xue, Lian; Li, Haibing; Brodsky, Emily

2013-04-01

Faults are complex hydrogeological structures which include a highly permeable damage zone with fracture-dominated permeability. Since fractures are generated by earthquakes, we would expect that in the aftermath of a large earthquake, the permeability would be transiently high in a fault zone. Over time, the permeability may recover due to a combination of chemical and mechanical processes. However, the in situ fault zone hydrological properties are difficult to measure and have never been directly constrained on a fault zone immediately after a large earthquake. In this work, we use water level response to solid Earth tides to constrain the hydraulic properties inside the Wenchuan Earthquake Fault Zone. The transmissivity and storage determine the phase and amplitude response of the water level to the tidal loading. By measuring phase and amplitude response, we can constrain the average hydraulic properties of the damage zone at 800-1200 m below the surface (~200-600 m from the principal slip zone). We use Markov chain Monte Carlo methods to evaluate the phase and amplitude responses and the corresponding errors for the largest semidiurnal Earth tide M2 in the time domain. The average phase lag is ~ 30o, and the average amplitude response is 6×10-7 strain/m. Assuming an isotropic, homogenous and laterally extensive aquifer, the average storage coefficient S is 2×10-4 and the average transmissivity T is 6×10-7 m2 using the measured phase and the amplitude response. Calculation for the hydraulic diffusivity D with D=T/S, yields the reported value of D is 3×10-3 m2/s, which is two orders of magnitude larger than pump test values on the Chelungpu Fault which is the site of the Mw 7.6 Chi-Chi earthquake. If the value is representative of the fault zone, then this means the hydrology processes should have an effect on the earthquake rupture process. This measurement is done through continuous monitoring and we could track the evolution for hydraulic properties

Same but not alike: Structure, flexibility and energetics of domains in multi-domain proteins are influenced by the presence of other domains

PubMed Central

Vishwanath, Sneha

2018-01-01

The majority of the proteins encoded in the genomes of eukaryotes contain more than one domain. Reasons for high prevalence of multi-domain proteins in various organisms have been attributed to higher stability and functional and folding advantages over single-domain proteins. Despite these advantages, many proteins are composed of only one domain while their homologous domains are part of multi-domain proteins. In the study presented here, differences in the properties of protein domains in single-domain and multi-domain systems and their influence on functions are discussed. We studied 20 pairs of identical protein domains, which were crystallized in two forms (a) tethered to other proteins domains and (b) tethered to fewer protein domains than (a) or not tethered to any protein domain. Results suggest that tethering of domains in multi-domain proteins influences the structural, dynamic and energetic properties of the constituent protein domains. 50% of the protein domain pairs show significant structural deviations while 90% of the protein domain pairs show differences in dynamics and 12% of the residues show differences in the energetics. To gain further insights on the influence of tethering on the function of the domains, 4 pairs of homologous protein domains, where one of them is a full-length single-domain protein and the other protein domain is a part of a multi-domain protein, were studied. Analyses showed that identical and structurally equivalent functional residues show differential dynamics in homologous protein domains; though comparable dynamics between in-silico generated chimera protein and multi-domain proteins were observed. From these observations, the differences observed in the functions of homologous proteins could be attributed to the presence of tethered domain. Overall, we conclude that tethered domains in multi-domain proteins not only provide stability or folding advantages but also influence pathways resulting in differences in

Same but not alike: Structure, flexibility and energetics of domains in multi-domain proteins are influenced by the presence of other domains.

PubMed

Vishwanath, Sneha; de Brevern, Alexandre G; Srinivasan, Narayanaswamy

2018-02-01

The majority of the proteins encoded in the genomes of eukaryotes contain more than one domain. Reasons for high prevalence of multi-domain proteins in various organisms have been attributed to higher stability and functional and folding advantages over single-domain proteins. Despite these advantages, many proteins are composed of only one domain while their homologous domains are part of multi-domain proteins. In the study presented here, differences in the properties of protein domains in single-domain and multi-domain systems and their influence on functions are discussed. We studied 20 pairs of identical protein domains, which were crystallized in two forms (a) tethered to other proteins domains and (b) tethered to fewer protein domains than (a) or not tethered to any protein domain. Results suggest that tethering of domains in multi-domain proteins influences the structural, dynamic and energetic properties of the constituent protein domains. 50% of the protein domain pairs show significant structural deviations while 90% of the protein domain pairs show differences in dynamics and 12% of the residues show differences in the energetics. To gain further insights on the influence of tethering on the function of the domains, 4 pairs of homologous protein domains, where one of them is a full-length single-domain protein and the other protein domain is a part of a multi-domain protein, were studied. Analyses showed that identical and structurally equivalent functional residues show differential dynamics in homologous protein domains; though comparable dynamics between in-silico generated chimera protein and multi-domain proteins were observed. From these observations, the differences observed in the functions of homologous proteins could be attributed to the presence of tethered domain. Overall, we conclude that tethered domains in multi-domain proteins not only provide stability or folding advantages but also influence pathways resulting in differences in

The PYRIN domain: A member of the death domain-fold superfamily

PubMed Central

Fairbrother, Wayne J.; Gordon, Nathaniel C.; Humke, Eric W.; O'Rourke, Karen M.; Starovasnik, Melissa A.; Yin, Jian-Ping; Dixit, Vishva M.

2001-01-01

PYRIN domains were identified recently as putative protein–protein interaction domains at the N-termini of several proteins thought to function in apoptotic and inflammatory signaling pathways. The ∼95 residue PYRIN domains have no statistically significant sequence homology to proteins with known three-dimensional structure. Using secondary structure prediction and potential-based fold recognition methods, however, the PYRIN domain is predicted to be a member of the six-helix bundle death domain-fold superfamily that includes death domains (DDs), death effector domains (DEDs), and caspase recruitment domains (CARDs). Members of the death domain-fold superfamily are well established mediators of protein–protein interactions found in many proteins involved in apoptosis and inflammation, indicating further that the PYRIN domains serve a similar function. An homology model of the PYRIN domain of CARD7/DEFCAP/NAC/NALP1, a member of the Apaf-1/Ced-4 family of proteins, was constructed using the three-dimensional structures of the FADD and p75 neurotrophin receptor DDs, and of the Apaf-1 and caspase-9 CARDs, as templates. Validation of the model using a variety of computational techniques indicates that the fold prediction is consistent with the sequence. Comparison of a circular dichroism spectrum of the PYRIN domain of CARD7/DEFCAP/NAC/NALP1 with spectra of several proteins known to adopt the death domain-fold provides experimental support for the structure prediction. PMID:11514682

76 FR 22033 - Safety Zone; Red River Safety Zone, Red River, MN

Federal Register 2010, 2011, 2012, 2013, 2014

2011-04-20

...-AAOO Safety Zone; Red River Safety Zone, Red River, MN AGENCY: Coast Guard, DHS. ACTION: Temporary... a temporary safety zone on the Red River, MN. This safety zone is being established to ensure the... Red River in the State of Minnesota north of a line drawn across latitude 46[deg]20'00'' N, including...

Zone lines

Treesearch

Kevin T. Smith

2001-01-01

Zone lines are narrow, usually dark markings formed in decaying wood. Zone lines are found most frequently in advanced white rot of hardwoods, although they occasionally are associated both with brown rot and with softwoods.

Mutation of domain III and domain VI in L gene conserved domain of Nipah virus

NASA Astrophysics Data System (ADS)

Jalani, Siti Aishah; Ibrahim, Nazlina

2016-11-01

Nipah virus (NiV) is the etiologic agent responsible for the respiratory illness and causes fatal encephalitis in human. NiV L protein subunit is thought to be responsible for the majority of enzymatic activities involved in viral transcription and replication. The L protein which is the viral RNA dependent RNA polymerase has high sequence homology among negative sense RNA viruses. In negative stranded RNA viruses, based on sequence alignment six conserved domain (domain I-IV) have been determined. Each domain is separated on variable regions that suggest the structure to consist concatenated functional domain. To directly address the roles of domains III and VI, site-directed mutations were constructed by the substitution of bases at sequences 2497, 2500, 5528 and 5532. Each mutated L gene can be used in future studies to test the ability for expression on in vitro translation.

Transcriptome Analysis of Tomato Flower Pedicel Tissues Reveals Abscission Zone-Specific Modulation of Key Meristem Activity Genes

PubMed Central

Sun, Xiuli; Zhang, Rongzhi; Wu, Liang; Liang, Yanchun; Mao, Long

2013-01-01

Tomato flower abscises at the anatomically distinct abscission zone that separates the pedicel into basal and apical portions. During abscission, cell separation occurs only at the abscission zone indicating distinctive molecular regulation in its cells. We conducted a transcriptome analysis of tomato pedicel tissues during ethylene promoted abscission. We found that the abscission zone was the most active site with the largest set of differentially expressed genes when compared with basal and apical portions. Gene Ontology analyses revealed enriched transcription regulation and hydrolase activities in the abscission zone. We also demonstrate coordinated responses of hormone and cell wall related genes. Besides, a number of ESTs representing homologs of key Arabidopsis shoot apical meristem activity genes were found to be preferentially expressed in the abscission zone, including WUSCHEL (WUS), KNAT6, LATERAL ORGAN BOUNDARIES DOMAIN PROTEIN 1(LBD1), and BELL-like homeodomain protein 1 (BLH1), as well as tomato axillary meristem genes BLIND (Bl) and LATERAL SUPPRESSOR (Ls). More interestingly, the homologs of WUS and the potential functional partner OVATE FAMILIY PROTEIN (OFP) were subsequently down regulated during abscission while Bl and AGL12 were continuously and specifically induced in the abscission zone. The expression patterns of meristem activity genes corroborate the idea that cells of the abscission zone confer meristem-like nature and coincide with the course of abscission and post-abscission cell differentiation. Our data therefore propose a possible regulatory scheme in tomato involving meristem genes that may be required not only for the abscission zone development, but also for abscission. PMID:23390523

Domain wall nanoelectronics

NASA Astrophysics Data System (ADS)

Catalan, G.; Seidel, J.; Ramesh, R.; Scott, J. F.

2012-01-01

Domains in ferroelectrics were considered to be well understood by the middle of the last century: They were generally rectilinear, and their walls were Ising-like. Their simplicity stood in stark contrast to the more complex Bloch walls or Néel walls in magnets. Only within the past decade and with the introduction of atomic-resolution studies via transmission electron microscopy, electron holography, and atomic force microscopy with polarization sensitivity has their real complexity been revealed. Additional phenomena appear in recent studies, especially of magnetoelectric materials, where functional properties inside domain walls are being directly measured. In this paper these studies are reviewed, focusing attention on ferroelectrics and multiferroics but making comparisons where possible with magnetic domains and domain walls. An important part of this review will concern device applications, with the spotlight on a new paradigm of ferroic devices where the domain walls, rather than the domains, are the active element. Here magnetic wall microelectronics is already in full swing, owing largely to the work of Cowburn and of Parkin and their colleagues. These devices exploit the high domain wall mobilities in magnets and their resulting high velocities, which can be supersonic, as shown by Kreines’ and co-workers 30 years ago. By comparison, nanoelectronic devices employing ferroelectric domain walls often have slower domain wall speeds, but may exploit their smaller size as well as their different functional properties. These include domain wall conductivity (metallic or even superconducting in bulk insulating or semiconducting oxides) and the fact that domain walls can be ferromagnetic while the surrounding domains are not.

Frequency and time-domain inspiral templates for comparable mass compact binaries in eccentric orbits

NASA Astrophysics Data System (ADS)

Tanay, Sashwat; Haney, Maria; Gopakumar, Achamveedu

2016-03-01

Inspiraling compact binaries with non-negligible orbital eccentricities are plausible gravitational wave (GW) sources for the upcoming network of GW observatories. In this paper, we present two prescriptions to compute post-Newtonian (PN) accurate inspiral templates for such binaries. First, we adapt and extend the postcircular scheme of Yunes et al. [Phys. Rev. D 80, 084001 (2009)] to obtain a Fourier-domain inspiral approximant that incorporates the effects of PN-accurate orbital eccentricity evolution. This results in a fully analytic frequency-domain inspiral waveform with Newtonian amplitude and 2PN-order Fourier phase while incorporating eccentricity effects up to sixth order at each PN order. The importance of incorporating eccentricity evolution contributions to the Fourier phase in a PN-consistent manner is also demonstrated. Second, we present an accurate and efficient prescription to incorporate orbital eccentricity into the quasicircular time-domain TaylorT4 approximant at 2PN order. New features include the use of rational functions in orbital eccentricity to implement the 1.5PN-order tail contributions to the far-zone fluxes. This leads to closed form PN-accurate differential equations for evolving eccentric orbits, and the resulting time-domain approximant is accurate and efficient to handle initial orbital eccentricities ≤0.9 . Preliminary GW data analysis implications are probed using match estimates.

Application of frequency- and time-domain electromagnetic surveys to characterize hydrostratigraphy and landfill construction at the Amargosa Desert Research Site, Beatty, Nevada

USGS Publications Warehouse

White, Eric A.; Day-Lewis, Frederick D.; Johnson, Carole D.; Lane, John W.

2016-01-01

In 2014 and 2015, the U.S. Geological Survey (USGS), conducted frequency-domain electromagnetic (FDEM) surveys at the USGS Amargosa Desert Research Site (ADRS), approximately 17 kilometers (km) south of Beatty, Nevada. The FDEM surveys were conducted within and adjacent to a closed low-level radioactive waste disposal site located at the ADRS. FDEM surveys were conducted on a grid of north-south and east-west profiles to assess the locations and boundaries of historically recorded waste-disposal trenches. In 2015, the USGS conducted time-domain (TDEM) soundings along a profile adjacent to the disposal site (landfill) in cooperation with the U.S. Environmental Protection Agency (USEPA), to assess the thickness and characteristics of the underlying deep unsaturated zone, and the hydrostratigraphy of the underlying saturated zone.FDEM survey results indicate the general location and extent of the waste-disposal trenches and reveal potential differences in material properties and the type and concentration of waste in several areas of the landfill. The TDEM surveys provide information on the underlying hydrostratigraphy and characteristics of the unsaturated zone that inform the site conceptual model and support an improved understanding of the hydrostratigraphic framework. Additional work is needed to interpret the TDEM results in the context of the local and regional structural geology.

Providing plastic zone extrusion

DOE Office of Scientific and Technical Information (OSTI.GOV)

Manchiraju, Venkata Kiran; Feng, Zhili; David, Stan A.

Plastic zone extrusion may be provided. First, a compressor may generate frictional heat in stock to place the stock in a plastic zone of the stock. Then, a conveyer may receive the stock in its plastic zone from the compressor and transport the stock in its plastic zone from the compressor. Next, a die may receive the stock in its plastic zone from the conveyer and extrude the stock to form a wire.

Slab seismicity in the Western Hellenic Subduction Zone: Constraints from tomography and double-difference relocation

NASA Astrophysics Data System (ADS)

Halpaap, Felix; Rondenay, Stéphane; Ottemöller, Lars

2016-04-01

The Western Hellenic subduction zone is characterized by a transition from oceanic to continental subduction. In the southern oceanic portion of the system, abundant seismicity reaches intermediate depths of 100-120 km, while the northern continental portion rarely exhibits deep earthquakes. Our study aims to investigate how this oceanic-continental transition affects fluid release and related seismicity along strike, by focusing on the distribution of intermediate depth earthquakes. To obtain a detailed image of the seismicity, we carry out a tomographic inversion for P- and S-velocities and double-difference earthquake relocation using a dataset of unprecedented spatial coverage in this area. Here we present results of these analyses in conjunction with high-resolution profiles from migrated receiver function images obtained from the MEDUSA experiment. We generate tomographic models by inverting data from 237 manually picked, well locatable events recorded at up to 130 stations. Stations from the permanent Greek network and the EGELADOS experiment supplement the 3-D coverage of the modeled domain, which covers a large part of mainland Greece and surrounding offshore areas. Corrections for the sphericity of the Earth and our update to the SIMULR16 package, which now allows S-inversion, help improve our previous models. Flexible gridding focusses the inversion on the domains of highest gradient around the slab, and we evaluate the resolution with checker board tests. We use the resulting velocity model to relocate earthquakes via the Double-Difference method, using a large dataset of differential traveltimes obtained by crosscorrelation of seismograms. Tens of earthquakes align along two planes forming a double seismic zone in the southern, oceanic portion of the subduction zone. With increasing subduction depth, the earthquakes appear closer to the center of the slab, outlining probable deserpentinization of the slab and concomitant eclogitization of dry crustal

A fictitious domain method for lithosphere-asthenosphere interaction: Application to periodic slab folding in the upper mantle

NASA Astrophysics Data System (ADS)

Cerpa, Nestor G.; Hassani, Riad; Gerbault, Muriel; Prévost, Jean-Herve

2014-05-01

We present a new approach for the lithosphere-asthenosphere interaction in subduction zones. The lithosphere is modeled as a Maxwell viscoelastic body sinking in the viscous asthenosphere. Both domains are discretized by the finite element method, and we use a staggered coupling method. The interaction is provided by a nonmatching interface method called the fictitious domain method. We describe a simplified formulation of this numerical technique and present 2-D examples and benchmarks. We aim at studying the effect of mantle viscosity on the cyclicity of slab folding at the 660 km depth transition zone. Such cyclicity has previously been shown to occur depending on the kinematics of both the overriding and subducting plates, in analog and numerical models that approximate the 660 km depth transition zone as an impenetrable barrier. Here we applied far-field plate velocities corresponding to those of the South-American and Nazca plates at present. Our models show that the viscosity of the asthenosphere impacts on folding cyclicity and consequently on the slab's dip as well as the stress regime of the overriding plate. Values of the mantle viscosity between 3 and 5 × 1020 Pa s are found to produce cycles similar to those reported for the Andes, which are of the order of 30-40 Myr (based on magmatism and sedimentological records). Moreover, we discuss the episodic development of horizontal subduction induced by cyclic folding and, hence, propose a new explanation for episodes of flat subduction under the South-American plate.

Domain Engineering

NASA Astrophysics Data System (ADS)

Bjørner, Dines

Before software can be designed we must know its requirements. Before requirements can be expressed we must understand the domain. So it follows, from our dogma, that we must first establish precise descriptions of domains; then, from such descriptions, “derive” at least domain and interface requirements; and from those and machine requirements design the software, or, more generally, the computing systems.

Visualizing domain wall and reverse domain superconductivity.

PubMed

Iavarone, M; Moore, S A; Fedor, J; Ciocys, S T; Karapetrov, G; Pearson, J; Novosad, V; Bader, S D

2014-08-28

In magnetically coupled, planar ferromagnet-superconductor (F/S) hybrid structures, magnetic domain walls can be used to spatially confine the superconductivity. In contrast to a superconductor in a uniform applied magnetic field, the nucleation of the superconducting order parameter in F/S structures is governed by the inhomogeneous magnetic field distribution. The interplay between the superconductivity localized at the domain walls and far from the walls leads to effects such as re-entrant superconductivity and reverse domain superconductivity with the critical temperature depending upon the location. Here we use scanning tunnelling spectroscopy to directly image the nucleation of superconductivity at the domain wall in F/S structures realized with Co-Pd multilayers and Pb thin films. Our results demonstrate that such F/S structures are attractive model systems that offer the possibility to control the strength and the location of the superconducting nucleus by applying an external magnetic field, potentially useful to guide vortices for computing application.

Visualizing domain wall and reverse domain superconductivity

PubMed Central

Iavarone, M.; Moore, S. A.; Fedor, J.; Ciocys, S. T.; Karapetrov, G.; Pearson, J.; Novosad, V.; Bader, S. D.

2014-01-01

In magnetically coupled, planar ferromagnet-superconductor (F/S) hybrid structures, magnetic domain walls can be used to spatially confine the superconductivity. In contrast to a superconductor in a uniform applied magnetic field, the nucleation of the superconducting order parameter in F/S structures is governed by the inhomogeneous magnetic field distribution. The interplay between the superconductivity localized at the domain walls and far from the walls leads to effects such as re-entrant superconductivity and reverse domain superconductivity with the critical temperature depending upon the location. Here we use scanning tunnelling spectroscopy to directly image the nucleation of superconductivity at the domain wall in F/S structures realized with Co-Pd multilayers and Pb thin films. Our results demonstrate that such F/S structures are attractive model systems that offer the possibility to control the strength and the location of the superconducting nucleus by applying an external magnetic field, potentially useful to guide vortices for computing application. PMID:25164004

Fault zone hydrogeology

NASA Astrophysics Data System (ADS)

Bense, V. F.; Gleeson, T.; Loveless, S. E.; Bour, O.; Scibek, J.

2013-12-01

Deformation along faults in the shallow crust (< 1 km) introduces permeability heterogeneity and anisotropy, which has an important impact on processes such as regional groundwater flow, hydrocarbon migration, and hydrothermal fluid circulation. Fault zones have the capacity to be hydraulic conduits connecting shallow and deep geological environments, but simultaneously the fault cores of many faults often form effective barriers to flow. The direct evaluation of the impact of faults to fluid flow patterns remains a challenge and requires a multidisciplinary research effort of structural geologists and hydrogeologists. However, we find that these disciplines often use different methods with little interaction between them. In this review, we document the current multi-disciplinary understanding of fault zone hydrogeology. We discuss surface- and subsurface observations from diverse rock types from unlithified and lithified clastic sediments through to carbonate, crystalline, and volcanic rocks. For each rock type, we evaluate geological deformation mechanisms, hydrogeologic observations and conceptual models of fault zone hydrogeology. Outcrop observations indicate that fault zones commonly have a permeability structure suggesting they should act as complex conduit-barrier systems in which along-fault flow is encouraged and across-fault flow is impeded. Hydrogeological observations of fault zones reported in the literature show a broad qualitative agreement with outcrop-based conceptual models of fault zone hydrogeology. Nevertheless, the specific impact of a particular fault permeability structure on fault zone hydrogeology can only be assessed when the hydrogeological context of the fault zone is considered and not from outcrop observations alone. To gain a more integrated, comprehensive understanding of fault zone hydrogeology, we foresee numerous synergistic opportunities and challenges for the discipline of structural geology and hydrogeology to co-evolve and

Domain Specific vs Domain General: Implications for Dynamic Assessment

ERIC Educational Resources Information Center

Kaniel, Shlomo

2010-01-01

The article responds to the need for evidence-based dynamic assessment. The article is divided into two sections: In Part 1 we examine the scientific answer to the question of how far human mental activities and capabilities are domain general (DG) / domain specific (DS). A highly complex answer emerges from the literature review of domains such…

Seed zones and breeding zones for sugar pine in southwestern Oregon.

Treesearch

Robert K. Campbell; Albert I. Sugano

1987-01-01

Provisional seed zones and breeding zones were developed for sugar pine (Pinus lambertiana Dougl.) in southwestern Oregon. Zones are based on a map of genetic variation patterns obtained by evaluating genotypes of trees from 142 locations in the region. Genotypes controlling growth vigor and growth rhythm were assessed in a common garden. Within...

Time-domain electromagnetic tests in the Wadi Bidah District, Kingdom of Saudi Arabia

USGS Publications Warehouse

Flanigan, Vincent J.; Sadek, Hamdy; Smith, Bruce; Tippens, C.L.

1983-01-01

A time-domain electromagnetic (TDEM) method was tested in two areas of mineralization in Precambrian rocks in the Wadi Bidah district, Kingdom of Saudi Arabia. Transient-decay voltages in profile mode were measured across the Sha'ab at Tare and Rabathan prospects by use of three transmitterreceiver loop configurations. At the Sha'ab at Tare prospect all of the loop configurations indicated the mineralized zone. Analysis of the coincident loop data at Sha'ab at Tare reveals that gossanous and altered rock of i0 ohm-m resistivity extends to a depth of 35 m, where there is an unweathered, dry mineralized zone of about 1 ohm-m resistivity. The model further suggests that the rocks at a depth of 55 m and below the water table are even less resistive (0. 1 ohm-m). The TDEM method successfully discriminated conductors within from those below the weathered zone at the Rabathan prospect. Conductors below the weathered zone are identified by a lack of transient response in the early part of the transient decay curve, followed by an increasing response in the middle to late parts of the transient decay curve. Results of these limited tests suggest the potential value of integrating TDEM with other geophysical tools in the Kingdom. Recommendations are made to expand these tests into a more comprehensive program that will evaluate the TDEM potential in various geologic environments that are host to mineral deposits of diverse origin.

WORKING WITH WHAEM2000: CAPTURE ZONE DELINEATION FOR A CITY WELLFIELD IN A VALLEY FILL GLACIAL OUTWASH AQUIFER SUPPORTING WELLHEAD PROTECTION

EPA Science Inventory

The purpose of this document is to introduce through a case study the use of the ground water geohydrology computer program WhAEM for Microsoft Windows (32-bit), or WhAEM2000. WhAEM2000 is a public domain, ground-water flow model designed to facilitate capture zone delineation an...

The Post-Eocene Evolution of the Doruneh Fault Region (Central Iran): The Intraplate Response to the Reorganization of the Arabia-Eurasia Collision Zone

NASA Astrophysics Data System (ADS)

Tadayon, Meisam; Rossetti, Federico; Zattin, Massimiliano; Nozaem, Reza; Calzolari, Gabriele; Madanipour, Saeed; Salvini, Francesco

2017-12-01

The Cenozoic deformation history of Central Iran has been dominantly accommodated by the activation of major intracontinental strike-slip fault zones, developed in the hinterland domain of the Arabia-Eurasia convergent margin. Few quantitative temporal and kinematic constraints are available from these strike-slip deformation zones, hampering a full assessment of the style and timing of intraplate deformation in Iran and the understanding of the possible linkage to the tectonic reorganization of the Zagros collisional zone. This study focuses on the region to the north of the active trace of the sinistral Doruneh Fault. By combing structural and low-temperature apatite fission track (AFT) and (U-Th)/He (AHe) thermochronology investigations, we provide new kinematic and temporal constraints to the deformation history of Central Iran. Our results document a post-Eocene polyphase tectonic evolution dominated by dextral strike-slip tectonics, whose activity is constrained since the early Miocene in response to an early, NW-SE oriented paleo-σ1 direction. A major phase of enhanced cooling/exhumation is constrained at the Miocene/Pliocene boundary, caused by a switch of the maximum paleo-σ1 direction to N-S. When integrated into the regional scenario, these data are framed into a new tectonic reconstruction for the Miocene-Quaternary time lapse, where strike-slip deformation in the intracontinental domain of Central Iran is interpreted as guided by the reorganization of the Zagros collisional zone in the transition from an immature to a mature stage of continental collision.

Functional and Evolutionary Analysis of the CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN Family.

PubMed

Roppolo, Daniele; Boeckmann, Brigitte; Pfister, Alexandre; Boutet, Emmanuel; Rubio, Maria C; Dénervaud-Tendon, Valérie; Vermeer, Joop E M; Gheyselinck, Jacqueline; Xenarios, Ioannis; Geldner, Niko

2014-08-01

CASPARIAN STRIP MEMBRANE DOMAIN PROTEINS (CASPs) are four-membrane-span proteins that mediate the deposition of Casparian strips in the endodermis by recruiting the lignin polymerization machinery. CASPs show high stability in their membrane domain, which presents all the hallmarks of a membrane scaffold. Here, we characterized the large family of CASP-like (CASPL) proteins. CASPLs were found in all major divisions of land plants as well as in green algae; homologs outside of the plant kingdom were identified as members of the MARVEL protein family. When ectopically expressed in the endodermis, most CASPLs were able to integrate the CASP membrane domain, which suggests that CASPLs share with CASPs the propensity to form transmembrane scaffolds. Extracellular loops are not necessary for generating the scaffold, since CASP1 was still able to localize correctly when either one of the extracellular loops was deleted. The CASP first extracellular loop was found conserved in euphyllophytes but absent in plants lacking Casparian strips, an observation that may contribute to the study of Casparian strip and root evolution. In Arabidopsis (Arabidopsis thaliana), CASPL showed specific expression in a variety of cell types, such as trichomes, abscission zone cells, peripheral root cap cells, and xylem pole pericycle cells. © 2014 American Society of Plant Biologists. All Rights Reserved.

Continuous Record of Permeability inside the Wenchuan Earthquake Fault Zone

NASA Astrophysics Data System (ADS)

Xue, L.; Li, H.; Brodsky, E. E.; Wang, H.; Pei, J.

2012-12-01

Faults are complex hydrogeological structures which include a highly permeable damage zone with fracture-dominated permeability. Since fractures are generated by earthquakes, we would expect that in the aftermath of a large earthquake, the permeability would be transiently high in a fault zone. Over time, the permeability may recover due to a combination of chemical and mechanical processes. However, the in situ fault zone hydrological properties are difficult to measure and have never been directly constrained on a fault zone immediately after a large earthquake. In this work, we use water level response to solid Earth tides to constrain the hydraulic properties inside the Wenchuan Earthquake Fault Zone. The transmissivity and storage determine the phase and amplitude response of the water level to the tidal loading. By measuring phase and amplitude response, we can constrain the average hydraulic properties of the damage zone at 800-1200 m below the surface (˜200-600 m from the principal slip zone). We use Markov chain Monte Carlo methods to evaluate the phase and amplitude responses and the corresponding errors for the largest semidiurnal Earth tide M2 in the time domain. The average phase lag is ˜30°, and the average amplitude response is 6×10-7 strain/m. Assuming an isotropic, homogenous and laterally extensive aquifer, the average storage coefficient S is 2×10-4 and the average transmissivity T is 6×10-7 m2 using the measured phase and the amplitude response. Calculation for the hydraulic diffusivity D with D=T/S, yields the reported value of D is 3×10-3 m2/s, which is two orders of magnitude larger than pump test values on the Chelungpu Fault which is the site of the Mw 7.6 Chi-Chi earthquake. If the value is representative of the fault zone, then this means the hydrology processes should have an effect on the earthquake rupture process. This measurement is done through continuous monitoring and we could track the evolution for hydraulic properties

Finite difference time domain electromagnetic scattering from frequency-dependent lossy materials

NASA Technical Reports Server (NTRS)

Luebbers, Raymond J.; Beggs, John H.

1991-01-01

Four different FDTD computer codes and companion Radar Cross Section (RCS) conversion codes on magnetic media are submitted. A single three dimensional dispersive FDTD code for both dispersive dielectric and magnetic materials was developed, along with a user's manual. The extension of FDTD to more complicated materials was made. The code is efficient and is capable of modeling interesting radar targets using a modest computer workstation platform. RCS results for two different plate geometries are reported. The FDTD method was also extended to computing far zone time domain results in two dimensions. Also the capability to model nonlinear materials was incorporated into FDTD and validated.

The Sorong Fault Zone, Indonesia: Mapping a Fault Zone Offshore

NASA Astrophysics Data System (ADS)

Melia, S.; Hall, R.

2017-12-01

The Sorong Fault Zone is a left-lateral strike-slip fault zone in eastern Indonesia, extending westwards from the Bird's Head peninsula of West Papua towards Sulawesi. It is the result of interactions between the Pacific, Caroline, Philippine Sea, and Australian Plates and much of it is offshore. Previous research on the fault zone has been limited by the low resolution of available data offshore, leading to debates over the extent, location, and timing of movements, and the tectonic evolution of eastern Indonesia. Different studies have shown it north of the Sula Islands, truncated south of Halmahera, continuing to Sulawesi, or splaying into a horsetail fan of smaller faults. Recently acquired high resolution multibeam bathymetry of the seafloor (with a resolution of 15-25 meters), and 2D seismic lines, provide the opportunity to trace the fault offshore. The position of different strands can be identified. On land, SRTM topography shows that in the northern Bird's Head the fault zone is characterised by closely spaced E-W trending faults. NW of the Bird's Head offshore there is a fold and thrust belt which terminates some strands. To the west of the Bird's Head offshore the fault zone diverges into multiple strands trending ENE-WSW. Regions of Riedel shearing are evident west of the Bird's Head, indicating sinistral strike-slip motion. Further west, the ENE-WSW trending faults turn to an E-W trend and there are at least three fault zones situated immediately south of Halmahera, north of the Sula Islands, and between the islands of Sanana and Mangole where the fault system terminates in horsetail strands. South of the Sula islands some former normal faults at the continent-ocean boundary with the North Banda Sea are being reactivated as strike-slip faults. The fault zone does not currently reach Sulawesi. The new fault map differs from previous interpretations concerning the location, age and significance of different parts of the Sorong Fault Zone. Kinematic

Numerical modeling of fluid flow in a fault zone: a case of study from Majella Mountain (Italy).

NASA Astrophysics Data System (ADS)

Romano, Valentina; Battaglia, Maurizio; Bigi, Sabina; De'Haven Hyman, Jeffrey; Valocchi, Albert J.

2017-04-01

The study of fluid flow in fractured rocks plays a key role in reservoir management, including CO2 sequestration and waste isolation. We present a numerical model of fluid flow in a fault zone, based on field data acquired in Majella Mountain, in the Central Apennines (Italy). This fault zone is considered a good analogue for the massive presence of fluid migration in the form of tar. Faults are mechanical features and cause permeability heterogeneities in the upper crust, so they strongly influence fluid flow. The distribution of the main components (core, damage zone) can lead the fault zone to act as a conduit, a barrier, or a combined conduit-barrier system. We integrated existing information and our own structural surveys of the area to better identify the major fault features (e.g., type of fractures, statistical properties, geometrical and petro-physical characteristics). In our model the damage zones of the fault are described as discretely fractured medium, while the core of the fault as a porous one. Our model utilizes the dfnWorks code, a parallelized computational suite, developed at Los Alamos National Laboratory (LANL), that generates three dimensional Discrete Fracture Network (DFN) of the damage zones of the fault and characterizes its hydraulic parameters. The challenge of the study is the coupling between the discrete domain of the damage zones and the continuum one of the core. The field investigations and the basic computational workflow will be described, along with preliminary results of fluid flow simulation at the scale of the fault.

Cytokinin stabilizes WUSCHEL by acting on the protein domains required for nuclear enrichment and transcription.

PubMed

Snipes, Stephen A; Rodriguez, Kevin; DeVries, Aaron E; Miyawaki, Kaori N; Perales, Mariano; Xie, Mingtang; Reddy, G Venugopala

2018-04-01

Concentration-dependent transcriptional regulation and the spatial regulation of transcription factor levels are poorly studied in plant development. WUSCHEL, a stem cell-promoting homeodomain transcription factor, accumulates at a higher level in the rib meristem than in the overlying central zone, which harbors stem cells in the shoot apical meristems of Arabidopsis thaliana. The differential accumulation of WUSCHEL in adjacent cells is critical for the spatial regulation and levels of CLAVATA3, a negative regulator of WUSCHEL transcription. Earlier studies have revealed that DNA-dependent dimerization, subcellular partitioning and protein destabilization control WUSCHEL protein levels and spatial accumulation. Moreover, the destabilization of WUSCHEL may also depend on the protein concentration. However, the roles of extrinsic spatial cues in maintaining differential accumulation of WUS are not understood. Through transient manipulation of hormone levels, hormone response patterns and analysis of the receptor mutants, we show that cytokinin signaling in the rib meristem acts through the transcriptional regulatory domains, the acidic domain and the WUSCHEL-box, to stabilize the WUS protein. Furthermore, we show that the same WUSCHEL-box functions as a degron sequence in cytokinin deficient regions in the central zone, leading to the destabilization of WUSCHEL. The coupled functions of the WUSCHEL-box in nuclear retention as described earlier, together with cytokinin sensing, reinforce higher nuclear accumulation of WUSCHEL in the rib meristem. In contrast a sub-threshold level may expose the WUSCHEL-box to destabilizing signals in the central zone. Thus, the cytokinin signaling acts as an asymmetric spatial cue in stabilizing the WUSCHEL protein to lead to its differential accumulation in neighboring cells, which is critical for concentration-dependent spatial regulation of CLAVATA3 transcription and meristem maintenance. Furthermore, our work shows that

77 FR 6007 - Quarterly Listings; Safety Zones, Security Zones, Special Local Regulations, Drawbridge Operation...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-02-07

...] Quarterly Listings; Safety Zones, Security Zones, Special Local Regulations, Drawbridge Operation... they could be published in the Federal Register. This notice lists temporary safety zones, security zones, special local regulations, drawbridge operation regulations and regulated navigation areas, all...

Domain-to-domain coupling in voltage-sensing phosphatase.

PubMed

Sakata, Souhei; Matsuda, Makoto; Kawanabe, Akira; Okamura, Yasushi

2017-01-01

Voltage-sensing phosphatase (VSP) consists of a transmembrane voltage sensor and a cytoplasmic enzyme region. The enzyme region contains the phosphatase and C2 domains, is structurally similar to the tumor suppressor phosphatase PTEN, and catalyzes the dephosphorylation of phosphoinositides. The transmembrane voltage sensor is connected to the phosphatase through a short linker region, and phosphatase activity is induced upon membrane depolarization. Although the detailed molecular characteristics of the voltage sensor domain and the enzyme region have been revealed, little is known how these two regions are coupled. In addition, it is important to know whether mechanism for coupling between the voltage sensor domain and downstream effector function is shared among other voltage sensor domain-containing proteins. Recent studies in which specific amino acid sites were genetically labeled using a fluorescent unnatural amino acid have enabled detection of the local structural changes in the cytoplasmic region of Ciona intestinalis VSP that occur with a change in membrane potential. The results of those studies provide novel insight into how the enzyme activity of the cytoplasmic region of VSP is regulated by the voltage sensor domain.

Domain-to-domain coupling in voltage-sensing phosphatase

PubMed Central

Sakata, Souhei; Matsuda, Makoto; Kawanabe, Akira; Okamura, Yasushi

2017-01-01

Voltage-sensing phosphatase (VSP) consists of a transmembrane voltage sensor and a cytoplasmic enzyme region. The enzyme region contains the phosphatase and C2 domains, is structurally similar to the tumor suppressor phosphatase PTEN, and catalyzes the dephosphorylation of phosphoinositides. The transmembrane voltage sensor is connected to the phosphatase through a short linker region, and phosphatase activity is induced upon membrane depolarization. Although the detailed molecular characteristics of the voltage sensor domain and the enzyme region have been revealed, little is known how these two regions are coupled. In addition, it is important to know whether mechanism for coupling between the voltage sensor domain and downstream effector function is shared among other voltage sensor domain-containing proteins. Recent studies in which specific amino acid sites were genetically labeled using a fluorescent unnatural amino acid have enabled detection of the local structural changes in the cytoplasmic region of Ciona intestinalis VSP that occur with a change in membrane potential. The results of those studies provide novel insight into how the enzyme activity of the cytoplasmic region of VSP is regulated by the voltage sensor domain. PMID:28744425

Skyrmion domain wall collision and domain wall-gated skyrmion logic

NASA Astrophysics Data System (ADS)

Xing, Xiangjun; Pong, Philip W. T.; Zhou, Yan

2016-08-01

Skyrmions and domain walls are significant spin textures of great technological relevance to magnetic memory and logic applications, where they can be used as carriers of information. The unique topology of skyrmions makes them display emergent dynamical properties as compared with domain walls. Some studies have demonstrated that the two topologically inequivalent magnetic objects could be interconverted by using cleverly designed geometric structures. Here, we numerically address the skyrmion domain wall collision in a magnetic racetrack by introducing relative motion between the two objects based on a specially designed junction. An electric current serves as the driving force that moves a skyrmion toward a trapped domain wall pair. We see different types of collision dynamics depending on the driving parameters. Most importantly, the modulation of skyrmion transport using domain walls is realized in this system, allowing a set of domain wall-gated logical NOT, NAND, and NOR gates to be constructed. This work provides a skyrmion-based spin-logic architecture that is fully compatible with racetrack memories.

Radiant zone heated particulate filter

DOEpatents

Gonze, Eugene V [Pinckney, MI

2011-12-27

A system includes a particulate matter (PM) filter including an upstream end for receiving exhaust gas and a downstream end. A radiant zoned heater includes N zones, where N is an integer greater than one, wherein each of the N zones includes M sub-zones, where M is an integer greater than or equal to one. A control module selectively activates at least a selected one of the N zones to initiate regeneration in downstream portions of the PM filter from the one of the N zones, restricts exhaust gas flow in a portion of the PM filter that corresponds to the selected one of the N zones, and deactivates non-selected ones of the N zones.

MIT domain of Vps4 is a Ca2+-dependent phosphoinositide-binding domain.

PubMed

Iwaya, Naoko; Takasu, Hirotoshi; Goda, Natsuko; Shirakawa, Masahiro; Tanaka, Toshiki; Hamada, Daizo; Hiroaki, Hidekazu

2013-05-01

The microtubule interacting and trafficking (MIT) domain is a small protein module that is conserved in proteins of diverged function, such as Vps4, spastin and sorting nexin 15 (SNX15). The molecular function of the MIT domain is protein-protein interaction, in which the domain recognizes peptides containing MIT-interacting motifs. Recently, we identified an evolutionarily related domain, 'variant' MIT domain at the N-terminal region of the microtubule severing enzyme katanin p60. We found that the domain was responsible for binding to microtubules and Ca(2+). Here, we have examined whether the authentic MIT domains also bind Ca(2+). We found that the loop between the first and second α-helices of the MIT domain binds a Ca(2+) ion. Furthermore, the MIT domains derived from Vps4b and SNX15a showed phosphoinositide-binding activities in a Ca(2+)-dependent manner. We propose that the MIT domain is a novel membrane-associating domain involved in endosomal trafficking.

Habitable Zone Evolution

NASA Astrophysics Data System (ADS)

Waltham, D.; Lota, J.

2012-12-01

The location of the habitable zone around a star depends upon stellar luminosity and upon the properties of a potentially habitable planet such as its mass and near-surface volatile inventory. Stellar luminosity generally increases as a star ages whilst planetary properties change through time as a consequence of biological and geological evolution. Hence, the location of the habitable zone changes through time as a result of both stellar evolution and planetary evolution. Using the Earth's Phanerozoic temperature history as a constraint, it is shown that changes in our own habitable zone over the last 540 My have been dominated by planetary evolution rather than solar evolution. Furthermore, sparse data from earlier times suggests that planetary evolution may have dominated habitable zone development throughout our biosphere's history. Hence, the existence of a continuously habitable zone depends upon accidents of complex bio-geochemical evolution more than it does upon relatively simple stellar-evolution. Evolution of the inner margin of the habitable zone through time using three different estimates for climate sensitivity. The dashed line shows a typical predicted evolution assuming this was driven simply by a steady increase in solar luminosity. Solar evolution does not account for the observations. Evolution of the outer margin of the habitable zone through time using three different estimates for climate sensitivity. The dashed line shows a typical predicted evolution assuming this was driven simply by a steady increase in solar luminosity. Solar evolution does not account for the observations.

Fibonacci-like zone plate

NASA Astrophysics Data System (ADS)

Cheng, Shubo; Liu, Mengsi; Xia, Tian; Tao, Shaohua

2018-06-01

We present a new family of diffractive lenses, Fibonacci-like zone plates, generated with a modified Fibonacci sequence. The focusing properties and the evolution of transverse diffraction pattern for the Fibonacci-like zone plates have been analytically investigated both theoretically and experimentally and compared with the corresponding Fresnel zone plates of the same resolution. The results demonstrate that the Fibonacci-like zone plates possess the self-similar property and the multifocal behavior. Furthermore, the Fibonacci-like zone plate beams are found to possess the self-reconstruction property, and would be promising for 3D optical tweezers, laser machining, and optical imaging.

76 FR 70342 - Quarterly Listings; Safety Zones, Security Zones, Special Local Regulations, Drawbridge Operation...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-14

...] Quarterly Listings; Safety Zones, Security Zones, Special Local Regulations, Drawbridge Operation... published in the Federal Register. This notice lists temporary safety zones, security zones, special local..., telephone (202) 372-3862. For questions on viewing, or on submitting material to the docket, contact Ms...

Structural architecture and petrophysical properties of the Rocca di Neto extensional fault zone developed in the shallow marine sediments of the Crotone Basin (Southern Apennines, Italy).

NASA Astrophysics Data System (ADS)

Pizzati, Mattia; Balsamo, Fabrizio; Iacumin, Paola; Swennen, Rudy; Storti, Fabrizio

2017-04-01

In this contribution we describe the architecture and petrophysical properties of the Rocca di Neto extensional fault zone in loose and poorly lithified sediments, located in the Crotone forearc basin (south Italy). To this end, we combined fieldwork with microstructural observations, grain size analysis, and in situ permeability measurements. The studied fault zone has an estimated maximum displacement of 80-90 m and separates early Pleistocene age (Gelasian) sands in the footwall from middle Pleistocene (Calabrian) silty clay in the hangingwall. The analysed outcrop consists of about 70 m section through the fault zone mostly developed in the footwall block. Fault zone consists of four different structural domains characterized by distinctive features: (1) <1 m-thick fault core (where the majority of the displacement is accommodated) in which bedding is transposed into foliation imparted by grain preferential orientation and some black gouges decorate the main slip surfaces; (2) zone of tectonic mixing characterized by a set of closely spaced and anastomosed deformation bands parallel to the main slip surface; (3) about 8 m-thick footwall damage zone characterized by synthetic and antithetic sets of deformation bands; (4) zone of background deformation with a few, widely-spaced conjugate minor faults and deformation bands. The boundary between the relatively undeformed sediments and the damage zone is not sharp and it is characterized by a progressive decrease in deformation intensity. The silty clay in the hangingwall damage zone is characterized by minor faults. Grain size and microstructural data indicate that particulate flow with little amount of cataclasis is the dominant deformation mechanism in both fault core rocks and deformation bands. Permeability of undeformed sediments is about 70000 mD, whereas the permeability in deformation bands ranges from 1000 to 18000 mD; within the fault core rocks permeability is reduced up to 3-4 orders of magnitude

The mantle transition zone beneath Antarctica: Evidence for thermal upwellings and hydration

NASA Astrophysics Data System (ADS)

Nyblade, Andrew; Emry, Erica; Hansen, Samantha; Julia, Jordi; Anandakrishnan, Sridhar; Aster, Richard; Wiens, Douglas; Huerta, Audrey; Wilson, Terry

2015-04-01

West Antarctica has experienced abundant Cenozoic volcanism, and it is suspected that the region is influenced by upwelling thermal plumes from the lower mantle; however this has not yet been verified, because seismic tomography results are not well resolved at mantle transition zone (MTZ) depths. We use P-wave receiver functions (PRFs) from temporary and permanent arrays throughout Antarctica, including the Antarctic POLENET, TAMNET, TAMSEIS, and GAMSEIS arrays, to explore the characteristics of the MTZ beneath the continent. We obtained PRFs for earthquakes occurring at 30-90° with Mb>5.5 using a time-domain iterative deconvolution method filtered with a Gaussian-width of 0.5 and 1.0, corresponding to frequencies less than ~0.24 Hz and ~0.48 Hz, respectively. We combine P receiver functions as single-station and as common conversion point stacks and migrate them to depth using the ak135 1-d velocity model. Results from West Antarctica suggest that the thickness of the MTZ varies throughout the region with thinning beneath the Ruppert Coast of Marie Byrd Land and beneath the Bentley Subglacial Trench and Whitmore Mountains. Also, prominent negative peaks are detected above the transition zone beneath much of West Antarctica and may be evidence for water-induced partial melt above the MTZ. Preliminary results from single-station stacks for the mantle transition zone beneath East Antarctica suggests that one section of East Antarctica, off of the South Pole may have slightly thinned transition zone. Results are forthcoming from the mantle transition zone beneath Victoria Land and the Northern Transantarctics. We propose that the MTZ beneath parts of West Antarctica and possibly also beneath one region of East Antarctica, is hotter than average, possibly due to material upwelling from the lower mantle. Furthermore, we propose that the transition zone beneath much of West Antarctica is water-rich and that upward migration of hydrated material results in formation of

Self-Sustained Mode-3 Tear Controls Dynamics of Narrow Retreating Subduction Zones

NASA Astrophysics Data System (ADS)

Munch, J.; Gerya, T.; Ueda, K.

2017-12-01

The Caribbean oroclinal basin exhibits several narrow retreating slabs in an oceanic domain. The slabs show a curved shape associated to a bent topography (trench). We propose that the curvature of the topography depends on slab retreat mechanisms following mode-3 tearing at the edges of the slab (out of the plane fracture propagation). While first-order characteristics have been principally reproduced in self-sustained subduction initiation models (Gerya et al., 2015, Nature, 527, 221-225), the relevant observations have not been quantified and the exact mechanism is not understood. In this work, we study the long-term 3D evolution of narrowing oceanic subduction zones during retreat, and investigate the link between mode-3 tear and orocline formation. Numerical experiments are carried out with a thermo-mechanical 3D finite-difference code. To allow the observation of developing topography, the precise location of the internal surface and its evolution by material diffusion is tracked. Retreating subduction is facilitated via a strong age contrast between a young lithosphere window enclosed by shear zones and the surrounding lithosphere. By varying the length and thickness of the shear zones and location of the age transition, the influence of these parameters on the tearing process and the development of topography is assessed. Experiments trigger subduction initiation and slab retreat via fracture zone collapse and spontaneous paired mode-3 tear propagation within the oceanic plate interior. Narrow retreating subducting slabs form as a natural result of the spontaneous paired tearing process. A curved trench forms along with slab retreat. Topography evolution and tearing trajectory appear to be dependent on the initial shear zones and young window dimensions. We also note a strong narrowing of the slab during the retreat (several tens of kilometers over 800 km of retreat). Overall, results indicate that narrowing of retreating slabs is a self

Cascadia Subduction Zone

USGS Publications Warehouse

Frankel, Arthur D.; Petersen, Mark D.

2008-01-01

The geometry and recurrence times of large earthquakes associated with the Cascadia Subduction Zone (CSZ) were discussed and debated at a March 28-29, 2006 Pacific Northwest workshop for the USGS National Seismic Hazard Maps. The CSZ is modeled from Cape Mendocino in California to Vancouver Island in British Columbia. We include the same geometry and weighting scheme as was used in the 2002 model (Frankel and others, 2002) based on thermal constraints (Fig. 1; Fluck and others, 1997 and a reexamination by Wang et al., 2003, Fig. 11, eastern edge of intermediate shading). This scheme includes four possibilities for the lower (eastern) limit of seismic rupture: the base of elastic zone (weight 0.1), the base of transition zone (weight 0.2), the midpoint of the transition zone (weight 0.2), and a model with a long north-south segment at 123.8? W in the southern and central portions of the CSZ, with a dogleg to the northwest in the northern portion of the zone (weight 0.5). The latter model was derived from the approximate average longitude of the contour of the 30 km depth of the CSZ as modeled by Fluck et al. (1997). A global study of the maximum depth of thrust earthquakes on subduction zones by Tichelaar and Ruff (1993) indicated maximum depths of about 40 km for most of the subduction zones studied, although the Mexican subduction zone had a maximum depth of about 25 km (R. LaForge, pers. comm., 2006). The recent inversion of GPS data by McCaffrey et al. (2007) shows a significant amount of coupling (a coupling factor of 0.2-0.3) as far east as 123.8? West in some portions of the CSZ. Both of these lines of evidence lend support to the model with a north-south segment at 123.8? W.

Viscous shear heating instabilities in a 1-D viscoelastic shear zone

NASA Astrophysics Data System (ADS)

Homburg, J. M.; Coon, E. T.; Spiegelman, M.; Kelemen, P. B.; Hirth, G.

2010-12-01

Viscous shear instabilities may provide a possible mechanism for some intermediate depth earthquakes where high confining pressure makes it difficult to achieve frictional failure. While many studies have explored the feedback between temperature-dependent strain rate and strain-rate dependent shear heating (e.g. Braeck and Podladchikov, 2007), most have used thermal anomalies to initiate a shear instability or have imposed a low viscosity region in their model domain (John et al., 2009). By contrast, Kelemen and Hirth (2007) relied on an initial grain size contrast between a predetermined fine-grained shear zone and coarse grained host rock to initiate an instability. This choice is supported by observations of numerous fine grained ductile shear zones in shallow mantle massifs as well as the possibility that annealed fine grained fault gouge, formed at oceanic transforms, subduction related thrusts and ‘outer rise’ faults, could be carried below the brittle/ductile transition by subduction. Improving upon the work of Kelemen and Hirth (2007), we have developed a 1-D numerical model that describes the behavior of a Maxwell viscoelastic body with the rheology of dry olivine being driven at a constant velocity at its boundary. We include diffusion and dislocation creep, dislocation accommodated grain boundary sliding, and low-temperature plasticity (Peierls mechanism). Initial results suggest that including low-temperature plasticity inhibits the ability of the system to undergo an instability, similar to the results of Kameyama et al. (1999). This is due to increased deformation in the background allowing more shear heating to take place, and thus softening the system prior to reaching the peak stress. However if the applied strain rate is high enough (e.g. greater than 0.5 x 10-11 s-1 for a domain size of 2 km, an 8 m wide shear zone, a background grain size of 1 mm, a shear zone grain size of 150 μm, and an initial temperature of 650°C) dramatic

Predicting detection performance with model observers: Fourier domain or spatial domain?

PubMed

Chen, Baiyu; Yu, Lifeng; Leng, Shuai; Kofler, James; Favazza, Christopher; Vrieze, Thomas; McCollough, Cynthia

2016-02-27

The use of Fourier domain model observer is challenged by iterative reconstruction (IR), because IR algorithms are nonlinear and IR images have noise texture different from that of FBP. A modified Fourier domain model observer, which incorporates nonlinear noise and resolution properties, has been proposed for IR and needs to be validated with human detection performance. On the other hand, the spatial domain model observer is theoretically applicable to IR, but more computationally intensive than the Fourier domain method. The purpose of this study is to compare the modified Fourier domain model observer to the spatial domain model observer with both FBP and IR images, using human detection performance as the gold standard. A phantom with inserts of various low contrast levels and sizes was repeatedly scanned 100 times on a third-generation, dual-source CT scanner at 5 dose levels and reconstructed using FBP and IR algorithms. The human detection performance of the inserts was measured via a 2-alternative-forced-choice (2AFC) test. In addition, two model observer performances were calculated, including a Fourier domain non-prewhitening model observer and a spatial domain channelized Hotelling observer. The performance of these two mode observers was compared in terms of how well they correlated with human observer performance. Our results demonstrated that the spatial domain model observer correlated well with human observers across various dose levels, object contrast levels, and object sizes. The Fourier domain observer correlated well with human observers using FBP images, but overestimated the detection performance using IR images.

Predicting detection performance with model observers: Fourier domain or spatial domain?

PubMed Central

Chen, Baiyu; Yu, Lifeng; Leng, Shuai; Kofler, James; Favazza, Christopher; Vrieze, Thomas; McCollough, Cynthia

2016-01-01

The use of Fourier domain model observer is challenged by iterative reconstruction (IR), because IR algorithms are nonlinear and IR images have noise texture different from that of FBP. A modified Fourier domain model observer, which incorporates nonlinear noise and resolution properties, has been proposed for IR and needs to be validated with human detection performance. On the other hand, the spatial domain model observer is theoretically applicable to IR, but more computationally intensive than the Fourier domain method. The purpose of this study is to compare the modified Fourier domain model observer to the spatial domain model observer with both FBP and IR images, using human detection performance as the gold standard. A phantom with inserts of various low contrast levels and sizes was repeatedly scanned 100 times on a third-generation, dual-source CT scanner at 5 dose levels and reconstructed using FBP and IR algorithms. The human detection performance of the inserts was measured via a 2-alternative-forced-choice (2AFC) test. In addition, two model observer performances were calculated, including a Fourier domain non-prewhitening model observer and a spatial domain channelized Hotelling observer. The performance of these two mode observers was compared in terms of how well they correlated with human observer performance. Our results demonstrated that the spatial domain model observer correlated well with human observers across various dose levels, object contrast levels, and object sizes. The Fourier domain observer correlated well with human observers using FBP images, but overestimated the detection performance using IR images. PMID:27239086

Domain-General and Domain-Specific Strategies for the Assessment of Distress Intolerance

PubMed Central

McHugh, R. Kathryn; Otto, Michael W.

2011-01-01

Recent research has provided evidence that distress intolerance—the perceived inability to tolerate distressing states—varies based on the domain of distress (e.g., pain, anxiety). Although domain-specific assessment strategies may provide information targeted to specific disorders or maladaptive behaviors, domain-general measures have the potential to facilitate comparisons across studies, disorders, and populations. The current study evaluated the utilization of self-report measures of distress intolerance as domain-general measures by examining their association with indices of behavioral avoidance and substance craving. Two groups of participants (N = 55) were recruited including a substance-dependent group and a comparison group equated based on the presence of an affective disorder. Results provided support for the validity of domain-general measures for assessing distress intolerance across varied domains. The importance of both domain-general and domain-specific measurement of distress intolerance is discussed. PMID:21823763

Extraction of repetitive transients with frequency domain multipoint kurtosis for bearing fault diagnosis

NASA Astrophysics Data System (ADS)

Liao, Yuhe; Sun, Peng; Wang, Baoxiang; Qu, Lei

2018-05-01

The appearance of repetitive transients in a vibration signal is one typical feature of faulty rolling element bearings. However, accurate extraction of these fault-related characteristic components has always been a challenging task, especially when there is interference from large amplitude impulsive noises. A frequency domain multipoint kurtosis (FDMK)-based fault diagnosis method is proposed in this paper. The multipoint kurtosis is redefined in the frequency domain and the computational accuracy is improved. An envelope autocorrelation function is also presented to estimate the fault characteristic frequency, which is used to set the frequency hunting zone of the FDMK. Then, the FDMK, instead of kurtosis, is utilized to generate a fast kurtogram and only the optimal band with maximum FDMK value is selected for envelope analysis. Negative interference from both large amplitude impulsive noise and shaft rotational speed related harmonic components are therefore greatly reduced. The analysis results of simulation and experimental data verify the capability and feasibility of this FDMK-based method

Fully Automated Single-Zone Elliptic Grid Generation for Mars Science Laboratory (MSL) Aeroshell and Canopy Geometries

NASA Technical Reports Server (NTRS)

kaul, Upender K.

2008-01-01

A procedure for generating smooth uniformly clustered single-zone grids using enhanced elliptic grid generation has been demonstrated here for the Mars Science Laboratory (MSL) geometries such as aeroshell and canopy. The procedure obviates the need for generating multizone grids for such geometries, as reported in the literature. This has been possible because the enhanced elliptic grid generator automatically generates clustered grids without manual prescription of decay parameters needed with the conventional approach. In fact, these decay parameters are calculated as decay functions as part of the solution, and they are not constant over a given boundary. Since these decay functions vary over a given boundary, orthogonal grids near any arbitrary boundary can be clustered automatically without having to break up the boundaries and the corresponding interior domains into various zones for grid generation.

76 FR 38297 - Safety Zone; Marine Events Requiring Safety Zones in the Captain of the Port Sault Sainte Marie Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-30

...'' W [DATUM: NAD 83]. (ii) Enforcement Period. This safety zone will be enforced on July 4, 2011 from 9...'' N, 086[deg]39'08.52'' W [DATUM: NAD 83]. (ii) Enforcement Period. This safety zone will be enforced...: NAD 83], with the West Bay shoreline forming the South and West boundaries of the zone. (ii...

On the large-scale dynamics of rapidly rotating convection zones. [in solar and stellar interiors

NASA Technical Reports Server (NTRS)

Durney, B. R.

1983-01-01

The fact that the values of the eight basic waves present in turbulent flows in the presence of rotation prohibit a tilt of eddy towards the axis of rotation is incorporated into a formalism for rapidly rotating convection zones. Equations for turbulent velocities are defined in a rotating coordinate system, assuming that gravity and grad delta T act in a radial direction. An expression is derived for the lifetime of a basic wave and then for the average velocity vector. A real convective eddy is formulated and the wave vectors are calculated. The velocity amplitude and the stress tensor amplitude are integrated over the eddy domain. Applied to the solar convective zone, it is found that the convective cells are aligned along the axis of rotation at the poles and at the equator, a model that conflicts with nonrotating mixng length theory predictions.

On the feeding zone of planetesimal formation by the streaming instability

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yang, Chao-Chin; Johansen, Anders, E-mail: ccyang@astro.lu.se, E-mail: anders@astro.lu.se

2014-09-10

The streaming instability is a promising mechanism to overcome the barriers in direct dust growth and lead to the formation of planetesimals. Most previous studies of the streaming instability, however, were focused on a local region of a protoplanetary disk with a limited simulation domain such that only one filamentary concentration of solids has been observed. The characteristic separation between filaments is therefore not known. To address this, we conduct the largest-scale simulations of the streaming instability to date, with computational domains up to 1.6 gas scale heights both horizontally and vertically. The large dynamical range allows the effect ofmore » vertical gas stratification to become prominent. We observe more frequent merging and splitting of filaments in simulation boxes of high vertical extent. We find multiple filamentary concentrations of solids with an average separation of about 0.2 local gas scale heights, much higher than the most unstable wavelength from linear stability analysis. This measures the characteristic separation of planetesimal forming events driven by the streaming instability and thus the initial feeding zone of planetesimals.« less

Developing New Methods for Microsampling and Sm/Nd Dating of Zoned Garnet

NASA Astrophysics Data System (ADS)

Pollington, A. D.; Baxter, E. F.

2007-12-01

Garnets provide one of the Earth Science community's most useful tools for studying rates, duration and timing of crustal processes. In this study we describe new techniques for fine sampling of multiple growth zones of garnet and Sm/Nd dating of each individual zone. We test these techniques on large (>5cm) garnets from a shear zone in the Tauern Window of Austria where we seek to quantify the growth history of garnet in a manner similar to dating tree rings. Microsampling permits a more precise quantification of duration, episodicity and kinetics of metamorphic reactions. Past studies of garnet growth duration - based on core and rim garnet ages - have been limited by sampling methods for extracting discrete, and accurate, growth zones. Modeling of radial growth symmetry in garnet shows that previous studies may underestimate garnet growth duration by as much as 50%. We are able to dramatically improve microsampling by using microdrilling guided by chemical maps of the garnet composition. This provides much improved precision and accuracy in sampling. By using chemical mapping of the garnet we can be sure that we are correctly sampling narrow (~500 micron wide) growth (i.e. age) zones rather than smearing and averaging multiple growth zones together. In principle, tens of growth zones (and ages) spanning the entire interval of garnet growth may be sampled and resolved. Microdrilled domains, the results of which are an ultrafine powder, are drilled and collected in water. Due to the adverse geochronological effect of unavoidable micro-inclusions in garnet, we have tested several partial dissolution techniques to cleanse the garnet of inclusions and yield higher 147Sm/144Nd and hence, more precise ages. Analysis of a finely crushed bulk Tauern Window garnet sample after HF/HClO3 cleansing indicates that 147Sm/144Nd at least as high as 0.89 is attainable in this particular sample, but cleansing efforts on microdrilled powders have thus far failed to yield such high

Domain Formation Induced by the Adsorption of Charged Proteins on Mixed Lipid Membranes

PubMed Central

Mbamala, Emmanuel C.; Ben-Shaul, Avinoam; May, Sylvio

2005-01-01

Peripheral proteins can trigger the formation of domains in mixed fluid-like lipid membranes. We analyze the mechanism underlying this process for proteins that bind electrostatically onto a flat two-component membrane, composed of charged and neutral lipid species. Of particular interest are membranes in which the hydrocarbon lipid tails tend to segregate owing to nonideal chain mixing, but the (protein-free) lipid membrane is nevertheless stable due to the electrostatic repulsion between the charged lipid headgroups. The adsorption of charged, say basic, proteins onto a membrane containing anionic lipids induces local lipid demixing, whereby charged lipids migrate toward (or away from) the adsorption site, so as to minimize the electrostatic binding free energy. Apart from reducing lipid headgroup repulsion, this process creates a gradient in lipid composition around the adsorption zone, and hence a line energy whose magnitude depends on the protein's size and charge and the extent of lipid chain nonideality. Above a certain critical lipid nonideality, the line energy is large enough to induce domain formation, i.e., protein aggregation and, concomitantly, macroscopic lipid phase separation. We quantitatively analyze the thermodynamic stability of the dressed membrane based on nonlinear Poisson-Boltzmann theory, accounting for both the microscopic characteristics of the proteins and lipid composition modulations at and around the adsorption zone. Spinodal surfaces and critical points of the dressed membranes are calculated for several different model proteins of spherical and disk-like shapes. Among the models studied we find the most substantial protein-induced membrane destabilization for disk-like proteins whose charges are concentrated in the membrane-facing surface. If additional charges reside on the side faces of the proteins, direct protein-protein repulsion diminishes considerably the propensity for domain formation. Generally, a highly charged flat face

Hydrology Domain Cyberinfrastructures: Successes, Challenges, and Opportunities

NASA Astrophysics Data System (ADS)

Horsburgh, J. S.

2015-12-01

Anticipated changes to climate, human population, land use, and urban form will alter the hydrology and availability of water within the water systems on which the world's population relies. Understanding the effects of these changes will be paramount in sustainably managing water resources, as well as maintaining associated capacity to provide ecosystem services (e.g., regulating flooding, maintaining instream flow during dry periods, cycling nutrients, and maintaining water quality). It will require better information characterizing both natural and human mediated hydrologic systems and enhanced ability to generate, manage, store, analyze, and share growing volumes of observational data. Over the past several years, a number of hydrology domain cyberinfrastructures have emerged or are currently under development that are focused on providing integrated access to and analysis of data for cross-domain synthesis studies. These include the Consortium of Universities for the Advancement of Hydrologic Science, Inc. (CUAHSI) Hydrologic Information System (HIS), the Critical Zone Observatory Information System (CZOData), HyroShare, the BiG CZ software system, and others. These systems have focused on sharing, integrating, and analyzing hydrologic observations data. This presentation will describe commonalities and differences in the cyberinfrastructure approaches used by these projects and will highlight successes and lessons learned in addressing the challenges of big and complex data. It will also identify new challenges and opportunities for next generation cyberinfrastructure and a next generation of cyber-savvy scientists and engineers as developers and users.

A new principle technic for the transformation from frequency domain to time domain

NASA Astrophysics Data System (ADS)

Gao, Ben-Qing

2017-03-01

A principle technic for the transformation from frequency domain to time domain is presented. Firstly, a special type of frequency domain transcendental equation is obtained for an expected frequency domain parameter which is a rational or irrational fraction expression. Secondly, the inverse Laplace transformation is performed. When the two time-domain factors corresponding to the two frequency domain factors at two sides of frequency domain transcendental equation are known quantities, a time domain transcendental equation is reached. At last, the expected time domain parameter corresponding to the expected frequency domain parameter can be solved by the inverse convolution process. Proceeding from rational or irrational fraction expression, all solving process is provided. In the meantime, the property of time domain sequence is analyzed and the strategy for choosing the parameter values is described. Numerical examples are presented to verify the proposed theory and technic. Except for rational or irrational fraction expressions, examples of complex relative permittivity of water and plasma are used as verification method. The principle method proposed in the paper can easily solve problems which are difficult to be solved by Laplace transformation.

76 FR 44803 - Quarterly Listings; Safety Zones, Security Zones, Special Local Regulations, Drawbridge Operation...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-07-27

... USCG-2009-1081 New Orleans, LA Safety Zone (Part 165)..... 12/23/2009 USCG-2009-1084 Rio Vista, CA...-1096 Port Portland Zone......... Safety Zone (Part 165)..... 7/3/2010 USCG-2009-0040 La Push, WA Safety...-0950 Madisonville, LA Safety Zone (Part 165)..... 12/31/2009 USCG-2009-0951 Lower Mississippi River...

The Pikwitonei granulite domain: A lower crustal level along the Churchill-Superior boundary in central Manitoba

NASA Technical Reports Server (NTRS)

Weber, W.

1983-01-01

The greenschist to amphibolite facies tonalite-greenstone terrain of the Gods Lake subprovince grades - in a northwesterly direction - into the granulite facies Pikwitonei domain at the western margins of the Superior Province. The transition is the result of prograde metamorphism and takes place over 50 - 100 km without any structural or lithological breaks. Locally the orthopyroxene isograd is oblique to the structural grain and transects greenstone belts, e.g., the Cross Lake belt. The greenstone belts in the granulite facies and adjacent lower grade domain consist mainly of mafic and (minor) ultramafic metavolcanics, and clastic and chemical metasedimentary rocks. Typical for the greenstone belts crossed by the orthopyroxene isograd are anorthositic gabbros and anorthosites, and plagiophyric mafic flows. The Pikwitonei granulite domain has been interpreted as to represent a lower crustal level which was uplifted to the present level of erosion. On the basis of gravimetric data this uplift has been modelled as an obduction onto the Churchill Province during the Hudsonian orogeny, similar to the Ivrea Zone. The fault between the Churchill and Superior Province is described.

Atomic interaction networks in the core of protein domains and their native folds.

PubMed

Soundararajan, Venkataramanan; Raman, Rahul; Raguram, S; Sasisekharan, V; Sasisekharan, Ram

2010-02-23

Vastly divergent sequences populate a majority of protein folds. In the quest to identify features that are conserved within protein domains belonging to the same fold, we set out to examine the entire protein universe on a fold-by-fold basis. We report that the atomic interaction network in the solvent-unexposed core of protein domains are fold-conserved, extraordinary sequence divergence notwithstanding. Further, we find that this feature, termed protein core atomic interaction network (or PCAIN) is significantly distinguishable across different folds, thus appearing to be "signature" of a domain's native fold. As part of this study, we computed the PCAINs for 8698 representative protein domains from families across the 1018 known protein folds to construct our seed database and an automated framework was developed for PCAIN-based characterization of the protein fold universe. A test set of randomly selected domains that are not in the seed database was classified with over 97% accuracy, independent of sequence divergence. As an application of this novel fold signature, a PCAIN-based scoring scheme was developed for comparative (homology-based) structure prediction, with 1-2 angstroms (mean 1.61A) C(alpha) RMSD generally observed between computed structures and reference crystal structures. Our results are consistent across the full spectrum of test domains including those from recent CASP experiments and most notably in the 'twilight' and 'midnight' zones wherein <30% and <10% target-template sequence identity prevails (mean twilight RMSD of 1.69A). We further demonstrate the utility of the PCAIN protocol to derive biological insight into protein structure-function relationships, by modeling the structure of the YopM effector novel E3 ligase (NEL) domain from plague-causative bacterium Yersinia Pestis and discussing its implications for host adaptive and innate immune modulation by the pathogen. Considering the several high-throughput, sequence

Atomic Interaction Networks in the Core of Protein Domains and Their Native Folds

PubMed Central

Soundararajan, Venkataramanan; Raman, Rahul; Raguram, S.; Sasisekharan, V.; Sasisekharan, Ram

2010-01-01

Vastly divergent sequences populate a majority of protein folds. In the quest to identify features that are conserved within protein domains belonging to the same fold, we set out to examine the entire protein universe on a fold-by-fold basis. We report that the atomic interaction network in the solvent-unexposed core of protein domains are fold-conserved, extraordinary sequence divergence notwithstanding. Further, we find that this feature, termed protein core atomic interaction network (or PCAIN) is significantly distinguishable across different folds, thus appearing to be “signature” of a domain's native fold. As part of this study, we computed the PCAINs for 8698 representative protein domains from families across the 1018 known protein folds to construct our seed database and an automated framework was developed for PCAIN-based characterization of the protein fold universe. A test set of randomly selected domains that are not in the seed database was classified with over 97% accuracy, independent of sequence divergence. As an application of this novel fold signature, a PCAIN-based scoring scheme was developed for comparative (homology-based) structure prediction, with 1–2 angstroms (mean 1.61A) Cα RMSD generally observed between computed structures and reference crystal structures. Our results are consistent across the full spectrum of test domains including those from recent CASP experiments and most notably in the ‘twilight’ and ‘midnight’ zones wherein <30% and <10% target-template sequence identity prevails (mean twilight RMSD of 1.69A). We further demonstrate the utility of the PCAIN protocol to derive biological insight into protein structure-function relationships, by modeling the structure of the YopM effector novel E3 ligase (NEL) domain from plague-causative bacterium Yersinia Pestis and discussing its implications for host adaptive and innate immune modulation by the pathogen. Considering the several high-throughput, sequence

A Logic for Inclusion of Administrative Domains and Administrators in Multi-domain Authorization

NASA Astrophysics Data System (ADS)

Iranmanesh, Zeinab; Amini, Morteza; Jalili, Rasool

Authorization policies for an administrative domain or a composition of multiple domains in multi-domain environments are determined by either one administrator or multiple administrators' cooperation. Several logic-based models for multi-domain environments' authorization have been proposed; however, they have not considered administrators and administrative domains in policies' representation. In this paper, we propose the syntax, proof theory, and semantics of a logic for multi-domain authorization policies including administrators and administrative domains. Considering administrators in policies provides the possibility of presenting composite administration having applicability in many collaborative applications. Indeed, administrators and administrative domains stated in policies can be used in authorization. The presented logic is based on modal logic and utilizes two calculi named the calculus of administrative domains and the calculus of administrators. It is also proved that the logic is sound. A case study is presented signifying the logic application in practical projects.

Holocene Vegetation and Fire Dynamics for Ecosystem Management in the Spruce-Moss Domain in Northwestern Québec

NASA Astrophysics Data System (ADS)

Andy, H.; Blarquez, O.; Grondin, P.

2017-12-01

Facing the depletion of the wood resource in Québec and possible threats such as climate change, actors of the forest sector urge the need for a scientific frame to the forest management. A set of reference conditions has been developed for defining management targets that will help to keep forests within their natural range of variability according to the preindustrial period (XIX-XX centuries). Those reference conditions are based on the stands age-class distribution under a given fire regime that enable to define the percentage of old-growth forest (>100 years) to be maintained in a landscape. For the western spruce-moss domain in Québec, the fire return interval (FRI) is equal to 150 years resulting in a target of 48% of old-growth forests. Yet, this target supposes that the environment and the ecosystem processes are homogeneous for an entire bioclimatic domain of 175 000 km2. By using a Redundancy Analysis (RDA) on modern inventories data on natural and human disturbances; climate and physical variables and forest composition, we were able to distinguish 5 main zones where interactions between stands and their environment are homogeneous and where local management targets could be developed. We then used 10 published sedimentary pollens and charcoal series in order to reconstruct the holocene fire and vegetation dynamics for those zones. Vegetation deduced from the analysis of the pollen diagrams showed that the long-term vegetation dynamics are zone specific indicating that the modern forest composition is a result of the Holocene trajectories occurring within each zone. Charcoals series were statistically analyzed for past fire detection and long-term FRI reconstruction. They suggest that for the entire territory the holocene FRI range from 174 to 265 years resulting in old-growth forests percentage within 44 and 65% depending on the zone. Hence, we conclude that current management targets should be revised to fit more with local forests ecosystem

Soil Moisture Flow and Nitrate Movement Simulation through Deep and Heterogeneous Vadose Zone using Dual-porosity Approach

NASA Astrophysics Data System (ADS)

Yadav, B. K.; Tomar, J.; Harter, T.

2014-12-01

We investigate nitrate movement from non-point sources in deep, heterogeneous vadose zones, using multi-dimensional variably saturated flow and transport simulations. We hypothesize that porous media heterogeneity causes saturation variability that leads to preferential flow systems such that a significant portion of the vadose zone does not significantly contribute to flow. We solve Richards' equation and the advection-dispersion equation to simulate soil moisture and nitrate transport regimes in plot-scale experiments conducted in the San Joaquin Valley, California. We compare equilibrium against non-equilibrium (dual-porosity) approaches. In the equilibrium approach we consider each soil layer to have unique hydraulic properties as a whole, while in the dual-porosity approach we assume that large fractions of the porous flow domain are immobile. However we consider exchange of water and solute between mobile and immobile zone using the appropriate mass transfer terms. The results indicate that flow and transport in a nearly 16 m deep stratified vadose zone comprised of eight layers of unconsolidated alluvium experiences highly non-uniform, localized preferential flow and transport patterns leading to accelerated nitrate transfer. The equilibrium approach largely under-predicted the leaching of nitrate to groundwater while the dual-porosity approach showed higher rates of nitrate leaching, consistent with field observations. The dual-porosity approach slightly over-predicted nitrogen storage in the vadose zone, which may be the result of limited matrix flow or denitrification not accounted for in the model. Results of this study may be helpful to better predict fertilizer and pesticide retention times in deep vadose zone, prior to recharge into the groundwater flow system. Keywords: Nitrate, Preferential flow, Heterogeneous vadose zone, Dual-porosity approach

The role of fluid mobility in the development of shale weathering profiles: Direct observations from a vadose zone monitoring system

NASA Astrophysics Data System (ADS)

Druhan, J. L.; Wang, J.; Cargill, S.; Murphy, C.; Tune, A. K.; Dietrich, W. E.; Rempe, D.

2017-12-01

Extensive effort has focused on resolving the contribution of weathering reactions to the transfer of mass over scales ranging from individual hillslope weathering profiles, across local watersheds, to continental drainage networks. A persistent limitation in quantifying these fluxes is the variability in fluid flowpaths through the subsurface, which may alter the extent of chemical weathering relative to that expected from idealized homogenous conditions. In the past decade, the consequence of fluid travel time on solute flux has been recognized as a key complexity in the interpretation of solute concentrations, particularly in upland watersheds characterized by fracture flowpaths, as is typical of shale-dominated landscapes. Though recent studies have suggested a variety of models for solute generation in such dual (matrix and fracture flow) domain systems, a central impediment to advancing prediction is the lack of direct observations. Here, we report solute chemistry as a function of depth across an 18 m thick vadose zone of weathered argillite (shale) in the Eel River Critical Zone Observatory (ERCZO) using novel sub-horizontal distributed samplers (Vadose Zone Monitoring System). We contrast a year of major and trace ion chemistry obtained from water samples collected approximately biweekly using two complementary sampling systems, one applying active pressure to extract matrix-bound pore fluid, and the other using a passive collection method to extract freely draining water. Precipitation falling during the winter rainy season passes through this vadose zone, causing increased rock moisture that is subsequently depleted by transpiring trees. Solute concentrations reflect these seasonal changes, and, surprisingly, normalized ion ratios span the full range of values reported for the world's largest rivers. Notably, for some major cations, freely draining water is consistently less concentrated than matrix-bound water, and the composition of vadose zone water

Reconstituting protein interaction networks using parameter-dependent domain-domain interactions

PubMed Central

2013-01-01

Background We can describe protein-protein interactions (PPIs) as sets of distinct domain-domain interactions (DDIs) that mediate the physical interactions between proteins. Experimental data confirm that DDIs are more consistent than their corresponding PPIs, lending support to the notion that analyses of DDIs may improve our understanding of PPIs and lead to further insights into cellular function, disease, and evolution. However, currently available experimental DDI data cover only a small fraction of all existing PPIs and, in the absence of structural data, determining which particular DDI mediates any given PPI is a challenge. Results We present two contributions to the field of domain interaction analysis. First, we introduce a novel computational strategy to merge domain annotation data from multiple databases. We show that when we merged yeast domain annotations from six annotation databases we increased the average number of domains per protein from 1.05 to 2.44, bringing it closer to the estimated average value of 3. Second, we introduce a novel computational method, parameter-dependent DDI selection (PADDS), which, given a set of PPIs, extracts a small set of domain pairs that can reconstruct the original set of protein interactions, while attempting to minimize false positives. Based on a set of PPIs from multiple organisms, our method extracted 27% more experimentally detected DDIs than existing computational approaches. Conclusions We have provided a method to merge domain annotation data from multiple sources, ensuring large and consistent domain annotation for any given organism. Moreover, we provided a method to extract a small set of DDIs from the underlying set of PPIs and we showed that, in contrast to existing approaches, our method was not biased towards DDIs with low or high occurrence counts. Finally, we used these two methods to highlight the influence of the underlying annotation density on the characteristics of extracted DDIs. Although

Shear zones bounding the central zone of the Limpopo Mobile Belt, southern Africa

NASA Astrophysics Data System (ADS)

McCouri, Stephen; Vearncombe, Julian R.

Contrary to previously suggested north-directed thrust emplacement of the central zone of the Limpopo mobile belt, we present evidence indicating west-directed emplacement. The central zone differs from the marginal zones in rock types, structural style and isotopic signature and is an allochthonous thrust sheet. It is bounded in the north by the dextral Tuli-Sabi shear zone and in the south by the sinistral Palala shear zone which are crustal-scale lateral ramps. Published gravity data suggest that the lateral ramps are linked at depth and they probably link at the surface, in a convex westward frontal ramp, in the vicinity of longitude 26°30'E in eastern Botswana. Two phases of movement, the first between 2.7 and 2.6 Ga and the second between 2.0 and 1.8 Ga. occurred on both the Tuli-Sabi and the Palala shear zones.

Freeway work zone lane capacity.

DOT National Transportation Integrated Search

2009-01-01

The focus of this report is a capacity analysis of two long-term urban freeway Work Zones. Work Zone #1 : tapered four mainline lanes to two, using two separate tapers; Work Zone #2 tapered two mainline lanes to one. : Work Zone throughput was analyz...

Spectral domain optical coherence tomography in Celestone® retinal toxicity.

PubMed

Marticorena-Álvarez, P; González Guijarro, J

2016-03-01

After inadvertent intravitreal injection of Celestone® (betamethasone sodium phosphate and acetate, benzalkonium chloride) in a patient, the macular spectral domain optical coherence tomography (SD-OCT) images showed hyper-reflectivity, thinning, and irregular spikes in the inner retinal layers. These early findings could explain the toxic secondary anatomical changes due to the drug itself and/or to its excipients. Late and permanent SD-OCT findings included changes in the ellipsoid zone and cystic-like spaces. In this case, SD-OCT images can help to better understand the pathophysiology of the retinal damage and to diagnose the associated complications, providing information with prognostic value. Copyright © 2015 Sociedad Española de Oftalmología. Published by Elsevier España, S.L.U. All rights reserved.

PREFACE: Domain wall dynamics in nanostructures Domain wall dynamics in nanostructures

NASA Astrophysics Data System (ADS)

Marrows, C. H.; Meier, G.

2012-01-01

Domain structures in magnetic materials are ubiquitous and have been studied for decades. The walls that separate them are topological defects in the magnetic order parameter and have a wide variety of complex forms. In general, their investigation is difficult in bulk materials since only the domain structure on the surface of a specimen is visible. Cutting the sample to reveal the interior causes a rearrangement of the domains into a new form. As with many other areas of magnetism, the study of domain wall physics has been revitalised by the advent of nanotechnology. The ability to fabricate nanoscale structures has permitted the formation of simplified and controlled domain patterns; the development of advanced microscopy methods has permitted them to be imaged and then modelled; subjecting them to ultrashort field and current pulses has permitted their dynamics to be explored. The latest results from all of these advances are described in this special issue. Not only has this led to results of great scientific beauty, but also to concepts of great applicability to future information technologies. In this issue the reader will find the latest results for these domain wall dynamics and the high-speed processes of topological structures such as domain walls and magnetic vortices. These dynamics can be driven by the application of magnetic fields, or by flowing currents through spintronic devices using the novel physics of spin-transfer torque. This complexity has been studied using a wide variety of experimental techniques at the edge of the spatial and temporal resolution currently available, and can be described using sophisticated analytical theory and computational modelling. As a result, the dynamics can be engineered to give rise to finely controlled memory and logic devices with new functionality. Moreover, the field is moving to study not only the conventional transition metal ferromagnets, but also complex heterostructures, novel magnets and even other

Collisional zones in Puerto Rico and the northern Caribbean

NASA Astrophysics Data System (ADS)

Laó-Dávila, Daniel A.

2014-10-01

Puerto Rico is an amalgamation of island arc terranes that has recorded the deformational and tectonic history of the North American-Caribbean Plate boundary. Four collisional zones indicate the contractional events that have occurred at the plate boundary. Metamorphism and deformation of Middle Jurassic to Early Cretaceous oceanic lithosphere during the Early Cretaceous indicate the earliest collisional event. Then, an ophiolitic mélange, mostly comprised of blocks of the metamorphosed oceanic lithosphere, was formed and emplaced in the backarc region during the Turonian-Coniacian deformational event. A possible collision with a buoyant block in the North American Plate caused late Maastrichtian-early Paleocene contraction that created fold-and-thrust belts and the remobilization and uplift of serpentinite bodies in the Southwest Block. Late Eocene-early Oligocene transpression was localized along the Southern and Northern Puerto Rico fault zones, which occur north and south of large granodiorite intrusions in the strong Central Block. The deformation was accommodated in pure shear domains of fold-and-thrust belts and conjugate strike-slip faults, and simple shear domains of large mostly left-lateral faults. In addition, it reactivated faults in the weak Southwest Block. This island-wide transpression is the result of a Greater Antilles arc and continental North American collision. The kinematic model of the structures described in Puerto Rico correlate with some structures in Hispaniola and Cuba, and shows how the northern boundary of the Caribbean Plate was shortened by collisions with continental lithosphere of the North American Plate throughout its history. The tectonic evolution of the Greater Antilles shows a history of collisions, in which the latest collision accretes Cuba to the North American Plate, reorganizes the plate boundary, and deforms with transpression Hispaniola and Puerto Rico. The latest collision in Puerto Rico shows the case in which an

33 CFR 165.503 - Security Zone; Captain of the Port Hampton Roads Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Port Hampton Roads Zone. 165.503 Section 165.503 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) PORTS AND WATERWAYS SAFETY REGULATED NAVIGATION AREAS AND LIMITED... § 165.503 Security Zone; Captain of the Port Hampton Roads Zone. (a) Definitions. As used in this...

Separated matter and antimatter domains with vanishing domain walls

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dolgov, A.D.; Godunov, S.I.; Rudenko, A.S.

2015-10-01

We present a model of spontaneous (or dynamical) C and CP violation where it is possible to generate domains of matter and antimatter separated by cosmologically large distances. Such C(CP) violation existed only in the early universe and later it disappeared with the only trace of generated baryonic and/or antibaryonic domains. So the problem of domain walls in this model does not exist. These features are achieved through a postulated form of interaction between inflaton and a new scalar field, realizing short time C(CP) violation.

33 CFR 3.35-10 - Sector Miami Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Zone and Captain of the Port Zone. 3.35-10 Section 3.35-10 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-10 Sector Miami Marine Inspection Zone and...

33 CFR 3.40-10 - Sector Mobile Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Zone and Captain of the Port Zone. 3.40-10 Section 3.40-10 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Eighth Coast Guard District § 3.40-10 Sector Mobile Marine Inspection Zone and...

33 CFR 3.40-10 - Sector Mobile Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Zone and Captain of the Port Zone. 3.40-10 Section 3.40-10 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Eighth Coast Guard District § 3.40-10 Sector Mobile Marine Inspection Zone and...

33 CFR 3.40-10 - Sector Mobile Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Zone and Captain of the Port Zone. 3.40-10 Section 3.40-10 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Eighth Coast Guard District § 3.40-10 Sector Mobile Marine Inspection Zone and...

33 CFR 3.35-10 - Sector Miami Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Zone and Captain of the Port Zone. 3.35-10 Section 3.35-10 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-10 Sector Miami Marine Inspection Zone and...

33 CFR 3.35-10 - Sector Miami Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Zone and Captain of the Port Zone. 3.35-10 Section 3.35-10 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-10 Sector Miami Marine Inspection Zone and...

33 CFR 3.40-10 - Sector Mobile Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Zone and Captain of the Port Zone. 3.40-10 Section 3.40-10 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Eighth Coast Guard District § 3.40-10 Sector Mobile Marine Inspection Zone and...

33 CFR 3.35-10 - Sector Miami Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Zone and Captain of the Port Zone. 3.35-10 Section 3.35-10 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-10 Sector Miami Marine Inspection Zone and...

33 CFR 3.65-15 - Sector Portland Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Zone and Captain of the Port Zone. 3.65-15 Section 3.65-15 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Thirteenth Coast Guard District § 3.65-15 Sector Portland Marine Inspection Zone...

33 CFR 3.35-10 - Sector Miami Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Zone and Captain of the Port Zone. 3.35-10 Section 3.35-10 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-10 Sector Miami Marine Inspection Zone and...

33 CFR 3.40-10 - Sector Mobile Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Zone and Captain of the Port Zone. 3.40-10 Section 3.40-10 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Eighth Coast Guard District § 3.40-10 Sector Mobile Marine Inspection Zone and...

Mushy zone modeling

NASA Astrophysics Data System (ADS)

Glicksman, Martin E.; Smith, Richard N.; Marsh, Steven P.; Kuklinski, Robert

A key element of mushy zone modeling is the description of the microscopic evolution of the lengthscales within the mushy zone and the influence of macroscopic transport processes. This paper describes some recent progress in developing a mean-field statistical theory of phase coarsening in adiabatic mushy zones. The main theoretical predictions are temporal scaling laws that indicate that average lengthscale increases as time 1/3, a self-similar distribution of mushy zone lengthscales based on spherical solid particle shapes, and kinetic rate constants which provide the dependences of the coarsening process on material parameters and the volume fraction of the solid phase. High precision thermal decay experiments are described which verify aspects of the theory in pure material mushy zones held under adiabatic conditions. The microscopic coarsening theory is then integrated within a macroscopic heat transfer model of one-dimensional alloy solidification, using the Double Integral Method. The method demonstrates an ability to predict the influence of macroscopic heat transfer on the evolution of primary and secondary dendrite arm spacings in Al-Cu alloys. Finally, some suggestions are made for future experimental and theoretical studies required in developing comprehensive solidification processing models.

47 CFR 73.609 - Zones.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 47 Telecommunication 4 2014-10-01 2014-10-01 false Zones. 73.609 Section 73.609 Telecommunication... Broadcast Stations § 73.609 Zones. (a) For the purpose of allotment and assignment, the United States is divided into three zones as follows: (1) Zone I consists of that portion of the United States located...

47 CFR 73.609 - Zones.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 47 Telecommunication 4 2010-10-01 2010-10-01 false Zones. 73.609 Section 73.609 Telecommunication... Broadcast Stations § 73.609 Zones. (a) For the purpose of allotment and assignment, the United States is divided into three zones as follows: (1) Zone I consists of that portion of the United States located...

47 CFR 73.609 - Zones.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 47 Telecommunication 4 2013-10-01 2013-10-01 false Zones. 73.609 Section 73.609 Telecommunication... Broadcast Stations § 73.609 Zones. (a) For the purpose of allotment and assignment, the United States is divided into three zones as follows: (1) Zone I consists of that portion of the United States located...

47 CFR 73.609 - Zones.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 47 Telecommunication 4 2012-10-01 2012-10-01 false Zones. 73.609 Section 73.609 Telecommunication... Broadcast Stations § 73.609 Zones. (a) For the purpose of allotment and assignment, the United States is divided into three zones as follows: (1) Zone I consists of that portion of the United States located...

47 CFR 73.609 - Zones.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 47 Telecommunication 4 2011-10-01 2011-10-01 false Zones. 73.609 Section 73.609 Telecommunication... Broadcast Stations § 73.609 Zones. (a) For the purpose of allotment and assignment, the United States is divided into three zones as follows: (1) Zone I consists of that portion of the United States located...

Internationalized Domain Names.

ERIC Educational Resources Information Center

Wielansky, Marc D.

2002-01-01

Reports on an investigation of what may appear at first to be an arcane topic--the internationalization of domain names on the Internet. Concludes that expanding domain names internationally poses challenges to the inherent open structure of the Internet; to its ease of use for those accustomed to Latin-alphabet-only domain names; and to corporate…

33 CFR 3.65-15 - Sector Columbia River Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Inspection Zone and Captain of the Port Zone. 3.65-15 Section 3.65-15 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Thirteenth Coast Guard District § 3.65-15 Sector Columbia River Marine Inspection Zone and Captain of the Port Zone. Sector Columbia River's office is located in Astoria...

33 CFR 3.65-15 - Sector Columbia River Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Inspection Zone and Captain of the Port Zone. 3.65-15 Section 3.65-15 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Thirteenth Coast Guard District § 3.65-15 Sector Columbia River Marine Inspection Zone and Captain of the Port Zone. Sector Columbia River's office is located in Astoria...

33 CFR 3.65-15 - Sector Columbia River Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Inspection Zone and Captain of the Port Zone. 3.65-15 Section 3.65-15 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Thirteenth Coast Guard District § 3.65-15 Sector Columbia River Marine Inspection Zone and Captain of the Port Zone. Sector Columbia River's office is located in Astoria...

33 CFR 3.65-15 - Sector Columbia River Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Inspection Zone and Captain of the Port Zone. 3.65-15 Section 3.65-15 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Thirteenth Coast Guard District § 3.65-15 Sector Columbia River Marine Inspection Zone and Captain of the Port Zone. Sector Columbia River's office is located in Astoria...

Comparison of frequency-domain and time-domain rotorcraft vibration control methods

NASA Technical Reports Server (NTRS)

Gupta, N. K.

1984-01-01

Active control of rotor-induced vibration in rotorcraft has received significant attention recently. Two classes of techniques have been proposed. The more developed approach works with harmonic analysis of measured time histories and is called the frequency-domain approach. The more recent approach computes the control input directly using the measured time history data and is called the time-domain approach. The report summarizes the results of a theoretical investigation to compare the two approaches. Five specific areas were addressed: (1) techniques to derive models needed for control design (system identification methods), (2) robustness with respect to errors, (3) transient response, (4) susceptibility to noise, and (5) implementation difficulties. The system identification methods are more difficult for the time-domain models. The time-domain approach is more robust (e.g., has higher gain and phase margins) than the frequency-domain approach. It might thus be possible to avoid doing real-time system identification in the time-domain approach by storing models at a number of flight conditions. The most significant error source is the variation in open-loop vibrations caused by pilot inputs, maneuvers or gusts. The implementation requirements are similar except that the time-domain approach can be much simpler to implement if real-time system identification were not necessary.

Rift Zone Abandonment and Reconfiguration in Hawaii: Evidence from Mauna Loa’s Ninole Rift Zone

NASA Astrophysics Data System (ADS)

Morgan, J. K.; Park, J.; Zelt, C. A.

2009-12-01

Large oceanic volcanoes commonly develop elongate rift zones that disperse viscous magmas to the distal reaches of the edifice. Intrusion and dike propagation occur under tension perpendicular to the rift zone, controlled by topography, magmatic pressures, and deformation of the edifice. However, as volcanoes grow and interact, the controlling stress fields can change, potentially altering the orientations and activities of rift zones. This phenomenon is probably common, and can produce complex internal structures that influence the evolution of a volcano and its neighbors. However, little direct evidence for such rift zone reconfiguration exists, primarily due to poor preservation or recognition of earlier volcanic configurations. A new onshore-offshore 3-D seismic velocity model for the Island of Hawaii, derived from a joint tomographic inversion of an offshore airgun shot - onshore receiver geometry and earthquake sources beneath the island, demonstrates a complicated history of rift zone reconfiguration on Mauna Loa volcano, Hawaii, including wholesale rift zone abandonment. Mauna Loa’s southeast flank contains a massive high velocity intrusive complex, now buried beneath flows derived from Mauna Loa’s active southwest rift zone (SWRZ). Introduced here as the Ninole Rift Zone, this feature extends more than 60 km south of Mauna Loa’s summit, spans a depth range of ~2-14 km below sea level, and is the probable source of the 100-200 ka Ninole volcanics in several prominent erosional hills. A lack of high velocities beneath the upper SWRZ and its separate zone of high velocities on the submarine flank, indicate that the younger rift zone was built upon a pre-existing edifice that emanated from the Ninole rift zone. The ancient Ninole rift zone may stabilize Mauna Loa’s southeast flank, focusing recent volcanic activity and deformation onto the unbuttressed west flank. The upper portion of the Ninole rift zone appears to have migrated westward over time

Development of groundwater vulnerability zones in a data-scarce eogenetic karst area using Head-Guided Zonation and particle-tracking simulation methods.

PubMed

Klaas, Dua K S Y; Imteaz, Monzur Alam; Arulrajah, Arul

2017-10-01

Delineation of groundwater vulnerability zones based on a valid groundwater model is crucial towards an accurate design of management strategies. However, limited data often restrain the development of a robust groundwater model. This study presents a methodology to develop groundwater vulnerability zones in a data-scarce area. The Head-Guided Zonation (HGZ) method was applied on the recharge area of Oemau Spring in Rote Island, Indonesia, which is under potential risk of contamination from rapid land use changes. In this method the model domain is divided into zones of piecewise constant into which the values of subsurface properties are assigned in the parameterisation step. Using reverse particle-tracking simulation on the calibrated and validated groundwater model, the simulation results (travel time and pathline trajectory) were combined with the potential groundwater contamination risk from human activities (land use type and current practice) to develop three vulnerability zones. The corresponding preventive management strategies were proposed to protect the spring from contamination and to ensure provision of safe and good quality water from the spring. Copyright © 2017 Elsevier Ltd. All rights reserved.

33 CFR 3.55-15 - Sector San Diego Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Inspection Zone and Captain of the Port Zone. 3.55-15 Section 3.55-15 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Eleventh Coast Guard District § 3.55-15 Sector San Diego Marine Inspection Zone and Captain of the Port Zone. Sector San Diego's office is located in San Diego, CA. The...

33 CFR 3.25-20 - Sector North Carolina Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Inspection Zone and Captain of the Port Zone. 3.25-20 Section 3.25-20 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Fifth Coast Guard District § 3.25-20 Sector North Carolina Marine Inspection Zone and Captain of the Port Zone. Sector North Carolina's office is located in Wilmington, NC...

33 CFR 3.55-15 - Sector San Diego Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Inspection Zone and Captain of the Port Zone. 3.55-15 Section 3.55-15 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Eleventh Coast Guard District § 3.55-15 Sector San Diego Marine Inspection Zone and Captain of the Port Zone. Sector San Diego's office is located in San Diego, CA. The...

33 CFR 3.55-15 - Sector San Diego Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Inspection Zone and Captain of the Port Zone. 3.55-15 Section 3.55-15 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Eleventh Coast Guard District § 3.55-15 Sector San Diego Marine Inspection Zone and Captain of the Port Zone. Sector San Diego's office is located in San Diego, CA. The...

33 CFR 3.55-15 - Sector San Diego Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Inspection Zone and Captain of the Port Zone. 3.55-15 Section 3.55-15 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Eleventh Coast Guard District § 3.55-15 Sector San Diego Marine Inspection Zone and Captain of the Port Zone. Sector San Diego's office is located in San Diego, CA. The...

33 CFR 3.25-20 - Sector North Carolina Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Inspection Zone and Captain of the Port Zone. 3.25-20 Section 3.25-20 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Fifth Coast Guard District § 3.25-20 Sector North Carolina Marine Inspection Zone and Captain of the Port Zone. Sector North Carolina's office is located in Wilmington, NC...

33 CFR 3.25-20 - Sector North Carolina Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Inspection Zone and Captain of the Port Zone. 3.25-20 Section 3.25-20 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Fifth Coast Guard District § 3.25-20 Sector North Carolina Marine Inspection Zone and Captain of the Port Zone. Sector North Carolina's office is located in Wilmington, NC...

33 CFR 3.55-15 - Sector San Diego Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Inspection Zone and Captain of the Port Zone. 3.55-15 Section 3.55-15 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Eleventh Coast Guard District § 3.55-15 Sector San Diego Marine Inspection Zone and Captain of the Port Zone. Sector San Diego's office is located in San Diego, CA. The...

33 CFR 3.25-20 - Sector North Carolina Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Inspection Zone and Captain of the Port Zone. 3.25-20 Section 3.25-20 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES Fifth Coast Guard District § 3.25-20 Sector North Carolina Marine Inspection Zone and Captain of the Port Zone. Sector North Carolina's office is located in Wilmington, NC...

33 CFR 165.503 - Security Zone; Captain of the Port Hampton Roads Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Port Hampton Roads Zone. 165.503 Section 165.503 Navigation and Navigable Waters COAST GUARD... § 165.503 Security Zone; Captain of the Port Hampton Roads Zone. (a) Definitions. As used in this... been authorized by the Captain of the Port (COTP), Hampton Roads, Virginia to act on his or her behalf...

Formulating a coastal zone health metric for landuse impact management in urban coastal zones.

PubMed

Anilkumar, P P; Varghese, Koshy; Ganesh, L S

2010-11-01

The need for ICZM arises often due to inadequate or inappropriate landuse planning practices and policies, especially in urban coastal zones which are more complex due to the larger number of components, their critical dimensions, attributes and interactions. A survey of literature shows that there is no holistic metric for assessing the impacts of landuse planning on the health of a coastal zone. Thus there is a need to define such a metric. The proposed metric, CHI (Coastal zone Health Indicator), developed on the basis of coastal system sustainability, attempts to gauge the health status of any coastal zone. It is formulated and modeled through an expert survey and pertains to the characteristic components of coastal zones, their critical dimensions, and relevant attributes. The proposed metric is applied to two urban coastal zones and validated. It can be used for more coast friendly and sustainable landuse planning/masterplan preparation and thereby for the better management of landuse impacts on coastal zones. Copyright 2010 Elsevier Ltd. All rights reserved.

78 FR 41694 - Safety Zone; Fireworks Events in Captain of the Port New York Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2013-07-11

... Zone; Fireworks Events in Captain of the Port New York Zone AGENCY: Coast Guard, DHS. ACTION: Notice of enforcement of regulation. SUMMARY: The Coast Guard will enforce safety zones in the Captain of the Port New York Zone on the specified dates and times. This action is necessary to ensure the safety of vessels...

78 FR 57482 - Safety Zone; Fireworks Event in Captain of the Port New York Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-19

... York Zone on the specified date and time. This action is necessary to ensure the safety of vessels and... regulation for the safety zone described in 33 CFR 165.160 will be enforced on the date and time listed in... Zone; Fireworks Event in Captain of the Port New York Zone AGENCY: Coast Guard, DHS. ACTION: Notice of...

77 FR 59551 - Safety Zone; Fireworks Event in Captain of the Port New York Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2012-09-28

... Zone; Fireworks Event in Captain of the Port New York Zone AGENCY: Coast Guard, DHS. ACTION: Notice of enforcement of regulation. SUMMARY: The Coast Guard will enforce a safety zone in the Captain of the Port New York Zone on the specified date and time. This action is necessary to ensure the safety of vessels and...

Adaptive multigrid domain decomposition solutions for viscous interacting flows

NASA Technical Reports Server (NTRS)

Rubin, Stanley G.; Srinivasan, Kumar

1992-01-01

Several viscous incompressible flows with strong pressure interaction and/or axial flow reversal are considered with an adaptive multigrid domain decomposition procedure. Specific examples include the triple deck structure surrounding the trailing edge of a flat plate, the flow recirculation in a trough geometry, and the flow in a rearward facing step channel. For the latter case, there are multiple recirculation zones, of different character, for laminar and turbulent flow conditions. A pressure-based form of flux-vector splitting is applied to the Navier-Stokes equations, which are represented by an implicit lowest-order reduced Navier-Stokes (RNS) system and a purely diffusive, higher-order, deferred-corrector. A trapezoidal or box-like form of discretization insures that all mass conservation properties are satisfied at interfacial and outflow boundaries, even for this primitive-variable, non-staggered grid computation.

[Current approach to zoning atomic shipbuilding plants].

PubMed

Blekher, A Ia

2005-01-01

The paper discusses the currently introduced radiation-and-hygienic system for zoning atomic shipbuilding plants, in accordance with which three radiation-and-hygienic zones (a strict regime zone, a controlled approach zone, and a free regime zone) are established at the plant site and two zones (a sanitary-and-protective zone and a follow-up zone) are also established outside the plant site.

GIS for the Assessment of the Groundwater Recharge Potential Zone

NASA Astrophysics Data System (ADS)

Lee, C.; Yeh, H.; Chen, J.; Hsu, K.

2008-12-01

Water resources in Taiwan are unevenly distributed in spatial and temporal domains. Effectively utilizing the water resources is an imperative task due to climate change. At present, groundwater contributes 34% of the total annual water supply and is an important fresh water resource. However, over-exploitation has decreased groundwater availability and has led to land subsidence. Assessing the potential zone of groundwater recharge is extremely important for the protection of water quality and the management of groundwater systems. The Chih-Pen Creek basin in eastern Taiwan is examined in this study to assess its groundwater resources potential. Remote sensing and the Geographical Information System (GIS) are used to integrate five contributing factors: lithology, land cover/land use, lineaments, drainage, and slope. The weights of factors contributing to the groundwater recharge are derived using aerial photos, geology maps, a land use database, and field verification. The resultant map of the groundwater potential zone demonstrates that the highest recharge potential area is located towards the downstream regions in the basin because of the high infiltration rates caused by gravelly sand and agricultural land use in these regions. In contrast, the least effective recharge potential area is in upstream regions due to the low infiltration of limestone.

49 CFR 71.13 - Samoa zone.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 49 Transportation 1 2010-10-01 2010-10-01 false Samoa zone. 71.13 Section 71.13 Transportation Office of the Secretary of Transportation STANDARD TIME ZONE BOUNDARIES § 71.13 Samoa zone. The eighth zone, the Samoa standard time zone, includes that part of the United States that is between 169 degrees...

49 CFR 71.14 - Chamorro Zone.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 49 Transportation 1 2010-10-01 2010-10-01 false Chamorro Zone. 71.14 Section 71.14 Transportation Office of the Secretary of Transportation STANDARD TIME ZONE BOUNDARIES § 71.14 Chamorro Zone. The ninth zone, the Chamorro standard time zone, includes the Island of Guam and the Commonwealth of the Northern...

49 CFR 71.10 - Pacific zone.

Code of Federal Regulations, 2010 CFR

2010-10-01

... Office of the Secretary of Transportation STANDARD TIME ZONE BOUNDARIES § 71.10 Pacific zone. The fifth zone, the Pacific standard time zone, includes that part of the continental United States that is west of the boundary line between the mountain and Pacific standard time zones described in § 71.9, but...

Seismic anisotropy in localized shear zones versus distributed tectonic fabrics: examples from geologic and seismic observations in western North America and the European Alps

NASA Astrophysics Data System (ADS)

Mahan, Kevin H.; Schulte-Pelkum, Vera; Condit, Cailey; Leydier, Thomas; Goncalves, Philippe; Raju, Anissha; Brownlee, Sarah; Orlandini, Omero F.

2017-04-01

Modern methods for detecting seismic anisotropy offer an array of promising tools for imaging deep crustal deformation but also present challenges, especially with respect to potential biases in both the detection methods themselves as well as in competing processes for localized versus distributed deformation. We address some of these issues from the geophysical perspective by employing azimuthally dependent amplitude and polarity variations in teleseismic receiver functions combined with a compilation of published rock elasticity tensors from middle and deep crustal rocks, and from the geological perspective through studies of shear zone deformation processes. Examples are highlighted at regional and outcrop scales from western North America and the European Alps. First, in regional patterns, strikes of seismically detected fabric from receiver functions in California show a strong alignment with current strike-slip motion between the Pacific and North American plates, with high signal strength near faults and from depths below the brittle-ductile transition suggesting these faults have deep ductile roots. In contrast, despite NE-striking shear zones being the most prominent features portrayed on Proterozoic tectonic maps of the southwestern USA, receiver function anisotropy from the central Rocky Mountain region appears to more prominently reflect broadly distributed Proterozoic fabric domains that preceded late-stage localized shear zones. Possible causes for the discrepancy fall into two categories: those that involve a) bias in seismic sampling and/or b) deformation processes that lead to either weaker anisotropy in the shear zones compared to adjacent domains or to a symmetry that is different from that conventionally assumed. Most of these explanations imply that the seismically sampled domains contain important structural information that is distinct from the shear zones. The second set of examples stem from studies of outcrop-scale shear zones in upper

Kinematics, partitioning and the relationship between velocity and strain in shear zones

NASA Astrophysics Data System (ADS)

Murphy, Justin James

Granite Point, southeast Washington State, captures older distributed deformation deflected by younger localized deformation. This history agrees with mathematical modeling completed by Watkinson and Patton (2005; 2007 in prep). This model suggests that distributed strain occurs at a lower energy threshold than localized strain and predicts deformation histories similar to Granite Point. Ductile shear zones at Granite Point define a zone of deformation where strain is partitioned and localized into at least ten sub parallel shear zones with sinistral, west side down shear sense. Can the relative movement of the boundaries of this partitioned system be reconstructed? Can partitioning be resolved from a distributed style of deformation? The state of strain and kinematics of actively deforming zones was studied by relating the velocity field to strain. The Aleutian Arc, Alaska and central Walker Lane, Nevada were chosen because they have a wealth of geologic data and are recognized examples of obliquely deforming zones. The graphical construction developed by Declan De Paor is ideally suited for this application because it provides a spatially referenced visualization of the relationship between velocity and strain. The construction of De Paor reproduces the observed orientation of strain in the Aleutian Arc, however, the spatial distribution of GPS stations suggest a component of partitioning. Partitioning does not provide a unique solution and cannot be differentiated from a combination of partitioning and distributed strain. In the central Walker Lane, strain trajectories can be reproduced at the domain scale. Furthermore, the effect of anisotropy from Paleozoic through Cenozoic crustal structure, which breaks the regional strain field into pure shear and simple shear dominated transtension can be detected. Without GPS velocities to document strictly coaxial strain, the strain orientation should not be taken as the velocity orientation. The strain recorded at

The generalized mean zone plate

NASA Astrophysics Data System (ADS)

Xia, Tian; Cheng, Shubo; Tao, Shaohua

2018-06-01

In this paper a generalized mean zone plate is proposed, which generates twin foci located at the positions satisfying the expression of the generalized mean, which includes the m-golden mean, precious mean, and so on. The generalized mean zone plate can be designed to generate twin foci with various position ratios. The diffraction properties of the generalized mean zone plates have been investigated with simulations and experiments. The results show that the ratio of the positions of the twin foci for the generalized mean zone plate can be designed with the selected zone plate parameters.

49 CFR 71.11 - Alaska zone.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 49 Transportation 1 2010-10-01 2010-10-01 false Alaska zone. 71.11 Section 71.11 Transportation Office of the Secretary of Transportation STANDARD TIME ZONE BOUNDARIES § 71.11 Alaska zone. The sixth zone, the Alaska standard time zone, includes the entire State of Alaska, except as provided in § 71.12...

49 CFR 71.6 - Central zone.

Code of Federal Regulations, 2010 CFR

2010-10-01

... Office of the Secretary of Transportation STANDARD TIME ZONE BOUNDARIES § 71.6 Central zone. The third zone, the central standard time zone, includes that part of the United States that is west of the boundary line between the eastern and central standard time zones described in § 71.5 and east of the...

49 CFR 71.8 - Mountain zone.

Code of Federal Regulations, 2010 CFR

2010-10-01

... Office of the Secretary of Transportation STANDARD TIME ZONE BOUNDARIES § 71.8 Mountain zone. The fourth zone, the mountain standard time zone, includes that part of the United States that is west of the boundary line between the central and mountain standard time zones described in § 71.7 and east of the...

49 CFR 71.4 - Eastern zone.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 49 Transportation 1 2010-10-01 2010-10-01 false Eastern zone. 71.4 Section 71.4 Transportation Office of the Secretary of Transportation STANDARD TIME ZONE BOUNDARIES § 71.4 Eastern zone. The second zone, the eastern standard time zone, includes that part of the United States that is west of 67°30″ W...

49 CFR 71.3 - Atlantic zone.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 49 Transportation 1 2010-10-01 2010-10-01 false Atlantic zone. 71.3 Section 71.3 Transportation Office of the Secretary of Transportation STANDARD TIME ZONE BOUNDARIES § 71.3 Atlantic zone. The first zone, the Atlantic standard time zone, includes that part of the United States that is between 52°30″ W...

Aircraft Surveys of the Beaufort Sea Seasonal Ice Zone

NASA Astrophysics Data System (ADS)

Morison, J.

2016-02-01

The Seasonal Ice Zone Reconnaissance Surveys (SIZRS) is a program of repeated ocean, ice, and atmospheric measurements across the Beaufort-Chukchi sea seasonal sea ice zone (SIZ) utilizing US Coast Guard Arctic Domain Awareness (ADA) flights of opportunity. The SIZ is the region between maximum winter sea ice extent and minimum summer sea ice extent. As such, it contains the full range of positions of the marginal ice zone (MIZ) where sea ice interacts with open water. The increasing size and changing air-ice-ocean properties of the SIZ are central to recent reductions in Arctic sea ice extent. The changes in the interplay among the atmosphere, ice, and ocean require a systematic SIZ observational effort of coordinated atmosphere, ice, and ocean observations covering up to interannual time-scales, Therefore, every year beginning in late Spring and continuing to early Fall, SIZRS makes monthly flights across the Beaufort Sea SIZ aboard Coast Guard C-130H aircraft from USCG Air Station Kodiak dropping Aircraft eXpendable CTDs (AXCTD) and Aircraft eXpendable Current Profilers (AXCP) for profiles of ocean temperature, salinity and shear, dropsondes for atmospheric temperature, humidity, and velocity profiles, and buoys for atmosphere and upper ocean time series. Enroute measurements include IR imaging, radiometer and lidar measurements of the sea surface and cloud tops. SIZRS also cooperates with the International Arctic Buoy Program for buoy deployments and with the NOAA Earth System Research Laboratory atmospheric chemistry sampling program on board the aircraft. Since 2012, SIZRS has found that even as SIZ extent, ice character, and atmospheric forcing varies year-to-year, the pattern of ocean freshening and radiative warming south of the ice edge is consistent. The experimental approach, observations and extensions to other projects will be discussed.

Domain shape instabilities and dendrite domain growth in uniaxial ferroelectrics

NASA Astrophysics Data System (ADS)

Shur, Vladimir Ya.; Akhmatkhanov, Andrey R.

2018-01-01

The effects of domain wall shape instabilities and the formation of nanodomains in front of moving walls obtained in various uniaxial ferroelectrics are discussed. Special attention is paid to the formation of self-assembled nanoscale and dendrite domain structures under highly non-equilibrium switching conditions. All obtained results are considered in the framework of the unified kinetic approach to domain structure evolution based on the analogy with first-order phase transformation. This article is part of the theme issue `From atomistic interfaces to dendritic patterns'.

33 CFR 3.35-40 - Sector Key West Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Zone and Captain of the Port Zone. 3.35-40 Section 3.35-40 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-40 Sector Key West Marine Inspection Zone...

33 CFR 3.35-40 - Sector Key West Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Zone and Captain of the Port Zone. 3.35-40 Section 3.35-40 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-40 Sector Key West Marine Inspection Zone...

33 CFR 3.35-40 - Sector Key West Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Zone and Captain of the Port Zone. 3.35-40 Section 3.35-40 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-40 Sector Key West Marine Inspection Zone...

33 CFR 3.35-40 - Sector Key West Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Zone and Captain of the Port Zone. 3.35-40 Section 3.35-40 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-40 Sector Key West Marine Inspection Zone...

33 CFR 3.35-40 - Sector Key West Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Zone and Captain of the Port Zone. 3.35-40 Section 3.35-40 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-40 Sector Key West Marine Inspection Zone...

76 FR 17782 - Security Zone: Passenger Vessels, Sector Southeastern New England Captain of the Port Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2011-03-31

...-AA87 Security Zone: Passenger Vessels, Sector Southeastern New England Captain of the Port Zone AGENCY... extending the effective period for temporary fixed and moving security zones around certain passenger vessels in the Sector Southeastern New England Captain of the Port Zone through October 1, 2011. Temporary...

77 FR 19970 - Security Zones; 2012 Republican National Convention, Captain of the Port St. Petersburg Zone...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-03

...-AA87 Security Zones; 2012 Republican National Convention, Captain of the Port St. Petersburg Zone... Marine Science Technician First Class Nolan L. Ammons, Sector St. Petersburg Prevention Department, Coast... proposed rule would establish seven temporary security zones in the Captain of the Port St. Petersburg Zone...

Coastal zone management

NASA Technical Reports Server (NTRS)

Tilton, E. L., III

1975-01-01

A panel of federal and state representatives concerned with coastal zone affairs discussed their problems in this area. In addition, several demonstrations of the application of remote sensing technology to coastal zone management were described. These demonstrations were performed by several agencies in a variety of geographical areas.

Near-census Delineation of Laterally Organized Geomorphic Zones and Associated Sub-width Fluvial Landforms

NASA Astrophysics Data System (ADS)

Pasternack, G. B.; Hopkins, C.

2017-12-01

A river channel and its associated riparian corridor exhibit a pattern of nested, geomorphically imprinted, lateral inundation zones (IZs). Each zone plays a key role in fluvial geomorphic processes and ecological functions. Within each zone, distinct landforms (aka geomorphic or morphological units, MUs) reside at the 0.1-10 channel width scale. These features are basic units linking river corridor morphology with local ecosystem services. Objective, automated delineation of nested inundation zones and morphological units remains a significant scientific challenge. This study describes and demonstrates new, objective methods for solving this problem, using the 35-km alluvial lower Yuba River as a testbed. A detrended, high-resolution digital elevation model constructed from near-census topographic and bathymetric data was produced and used in a hypsograph analysis, a commonly used method in oceanographic studies capable of identifying slope breaks at IZ transitions. Geomorphic interpretation mindful of the river's setting was required to properly describe each IZ identified by the hypsograph analysis. Then, a 2D hydrodynamic model was used to determine what flow yields the wetted area that most closely matches each IZ domain. The model also provided meter-scale rasters of depth and velocity useful for MU mapping. Even though MUs are discharge-independent landforms, they can be revealed by analyzing their overlying hydraulics at low flows. Baseflow depth and velocity rasters are used along with a hydraulic landform classification system to quantitatively delineate in-channel bed MU types. In-channel bar and off-channel flood and valley MUs are delineated using a combination of hydraulic and geomorphic indicators, such as depth and velocity rasters for different discharges, topographic contours, NAIP imagery, and a raster of vegetation. The ability to objectively delineate inundation zones and morphological units in tandem allows for better informed river management

33 CFR 3.05-20 - Sector Southeastern New England Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Marine Inspection Zone and Captain of the Port Zone. 3.05-20 Section 3.05-20 Navigation and Navigable... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES First Coast Guard District § 3.05-20 Sector Southeastern New England Marine Inspection Zone and Captain of the Port Zone. Sector Southeastern New England's office is...

33 CFR 3.05-20 - Sector Southeastern New England Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Marine Inspection Zone and Captain of the Port Zone. 3.05-20 Section 3.05-20 Navigation and Navigable... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES First Coast Guard District § 3.05-20 Sector Southeastern New England Marine Inspection Zone and Captain of the Port Zone. Sector Southeastern New England's office is...

33 CFR 3.05-20 - Sector Southeastern New England Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Marine Inspection Zone and Captain of the Port Zone. 3.05-20 Section 3.05-20 Navigation and Navigable... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES First Coast Guard District § 3.05-20 Sector Southeastern New England Marine Inspection Zone and Captain of the Port Zone. Sector Southeastern New England's office is...

33 CFR 3.05-20 - Sector Southeastern New England Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Marine Inspection Zone and Captain of the Port Zone. 3.05-20 Section 3.05-20 Navigation and Navigable... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES First Coast Guard District § 3.05-20 Sector Southeastern New England Marine Inspection Zone and Captain of the Port Zone. Sector Southeastern New England's office is...

33 CFR 3.05-20 - Sector Southeastern New England Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Marine Inspection Zone and Captain of the Port Zone. 3.05-20 Section 3.05-20 Navigation and Navigable... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES First Coast Guard District § 3.05-20 Sector Southeastern New England Marine Inspection Zone and Captain of the Port Zone. Sector Southeastern New England's office is...

78 FR 5717 - Safety Zone; Military Ocean Terminal Concord Safety Zone, Suisun Bay, Military Ocean Terminal...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-01-28

...-AA00 Safety Zone; Military Ocean Terminal Concord Safety Zone, Suisun Bay, Military Ocean Terminal... Guard is establishing a safety zone in the navigable waters of Suisun Bay near Military Ocean Terminal Concord, CA in support of military onload and offload operations. This safety zone is established to...

33 CFR 147.847 - Safety Zone; BW PIONEER Floating Production, Storage, and Offloading System Safety Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Safety Zone; BW PIONEER Floating... ZONES § 147.847 Safety Zone; BW PIONEER Floating Production, Storage, and Offloading System Safety Zone. (a) Description. The BW PIONEER, a Floating Production, Storage and Offloading (FPSO) system, is in...

33 CFR 3.05-35 - Sector Long Island Sound Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Inspection Zone and Captain of the Port Zone. 3.05-35 Section 3.05-35 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES First Coast Guard District § 3.05-35 Sector Long Island Sound Marine Inspection Zone and Captain of the Port Zone. Sector Long Island Sound's office is located in New...

33 CFR 3.05-35 - Sector Long Island Sound Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Inspection Zone and Captain of the Port Zone. 3.05-35 Section 3.05-35 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES First Coast Guard District § 3.05-35 Sector Long Island Sound Marine Inspection Zone and Captain of the Port Zone. Sector Long Island Sound's office is located in New...

33 CFR 3.05-35 - Sector Long Island Sound Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Inspection Zone and Captain of the Port Zone. 3.05-35 Section 3.05-35 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES First Coast Guard District § 3.05-35 Sector Long Island Sound Marine Inspection Zone and Captain of the Port Zone. Sector Long Island Sound's office is located in New...

33 CFR 3.05-35 - Sector Long Island Sound Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Inspection Zone and Captain of the Port Zone. 3.05-35 Section 3.05-35 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES First Coast Guard District § 3.05-35 Sector Long Island Sound Marine Inspection Zone and Captain of the Port Zone. Sector Long Island Sound's office is located in New...

33 CFR 3.05-35 - Sector Long Island Sound Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Inspection Zone and Captain of the Port Zone. 3.05-35 Section 3.05-35 Navigation and Navigable Waters COAST... ZONES, AND CAPTAIN OF THE PORT ZONES First Coast Guard District § 3.05-35 Sector Long Island Sound Marine Inspection Zone and Captain of the Port Zone. Sector Long Island Sound's office is located in New...

Complex plume dynamics in the transition zone underneath the Hawaii hotspot: seismic imaging results

NASA Astrophysics Data System (ADS)

Cao, Q.; van der Hilst, R. D.; de Hoop, M. V.; Shim, S.

2010-12-01

In recent years, progress has been made in seismology to constrain the depth variations of the transition zone discontinuities, e.g. 410 km and 660 km discontinuities, which can be used to constrain the local temperature and chemistry profiles, and hence to infer the existences and morphology of mantle plumes. Taking advantage of the abundance of natural earthquake sources in western Pacific subduction zones and the many seismograph stations in the Americas, we used a generalized Radon transform (GRT), a high resolution inverse-scattering technique, of SS precursors to form 3-D images of the transition zone structures of a 30 degree by 40 degree area underneath Hawaii and the Hawaii-Emperor seamount chain. Rather than a simple mushroom-shape plume, our seismic images suggest complex plume dynamics interacting with the transition zone phase transitions, especially at the 660’ discontinuity. A conspicuous uplift of the 660 discontinuity in a region of 800km in diameter is observed to the west of Hawaii. No correspondent localized depression of the 410 discontinuity is found. This lack of correlation between and differences in lateral length scale of the topographies of the 410 and 660 km discontinuities are consistent with many geodynamical modeling results, in which a deep-mantle plume impinging on the transition zone, creating a pond of hot material underneath endothermic phase change at 660 km depth, and with secondary plumes connecting to the present-day hotspot at Earth’s surface. This more complex plume dynamics suggests that the complicated mass transport process across the transition zone should be taken into account when we try to link the geochemical observations of Hawaiian basalt geochemistry at the Earth’s surface to deep mantle domains. In addition to clear signals at 410km, 520km and 660km depth, the data also reveals rich structures near 350km depth and between 800 - 1000km depth, which may be regional, laterally intermittent scatter interfaces

Domain-Generality versus Domain-Specificity: The Life and Impending Death of a False Dichotomy.

ERIC Educational Resources Information Center

Sternberg, Robert J.

1989-01-01

Argues that the question of whether information representation and processing are domain-general or domain-specific is neither meaningful nor answerable. Researchers should be asking questions about ways in which representation and processing are domain-general and ways in which they are domain-specific. (RH)

33 CFR 165.1141 - Safety Zone; San Clemente 3 NM Safety Zone, San Clemente Island, CA.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Guard District § 165.1141 Safety Zone; San Clemente 3 NM Safety Zone, San Clemente Island, CA. (a) Location. The following area is a safety zone: All waters of the Pacific Ocean surrounding San Clemente... Safety Zone, San Clemente Island, CA. 165.1141 Section 165.1141 Navigation and Navigable Waters COAST...

33 CFR 165.1141 - Safety Zone; San Clemente 3 NM Safety Zone, San Clemente Island, CA.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Guard District § 165.1141 Safety Zone; San Clemente 3 NM Safety Zone, San Clemente Island, CA. (a) Location. The following area is a safety zone: All waters of the Pacific Ocean surrounding San Clemente... Safety Zone, San Clemente Island, CA. 165.1141 Section 165.1141 Navigation and Navigable Waters COAST...

33 CFR 165.1141 - Safety Zone; San Clemente 3 NM Safety Zone, San Clemente Island, CA.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Guard District § 165.1141 Safety Zone; San Clemente 3 NM Safety Zone, San Clemente Island, CA. (a) Location. The following area is a safety zone: All waters of the Pacific Ocean surrounding San Clemente... Safety Zone, San Clemente Island, CA. 165.1141 Section 165.1141 Navigation and Navigable Waters COAST...

33 CFR 165.1141 - Safety Zone; San Clemente 3 NM Safety Zone, San Clemente Island, CA.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Guard District § 165.1141 Safety Zone; San Clemente 3 NM Safety Zone, San Clemente Island, CA. (a) Location. The following area is a safety zone: All waters of the Pacific Ocean surrounding San Clemente... Safety Zone, San Clemente Island, CA. 165.1141 Section 165.1141 Navigation and Navigable Waters COAST...

33 CFR 165.1141 - Safety Zone; San Clemente 3 NM Safety Zone, San Clemente Island, CA.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Guard District § 165.1141 Safety Zone; San Clemente 3 NM Safety Zone, San Clemente Island, CA. (a) Location. The following area is a safety zone: All waters of the Pacific Ocean surrounding San Clemente... Safety Zone, San Clemente Island, CA. 165.1141 Section 165.1141 Navigation and Navigable Waters COAST...

Between-domain relations of students' academic emotions and their judgments of school domain similarity

PubMed Central

Goetz, Thomas; Haag, Ludwig; Lipnevich, Anastasiya A.; Keller, Melanie M.; Frenzel, Anne C.; Collier, Antonie P. M.

2014-01-01

With the aim to deepen our understanding of the between-domain relations of academic emotions, a series of three studies was conducted. We theorized that between-domain relations of trait (i.e., habitual) emotions reflected students' judgments of domain similarities, whereas between-domain relations of state (i.e., momentary) emotions did not. This supposition was based on the accessibility model of emotional self-report, according to which individuals' beliefs tend to strongly impact trait, but not state emotions. The aim of Study 1 (interviews; N = 40; 8th and 11th graders) was to gather salient characteristics of academic domains from students' perspective. In Study 2 (N = 1709; 8th and 11th graders) the 13 characteristics identified in Study 1 were assessed along with academic emotions in four different domains (mathematics, physics, German, and English) using a questionnaire-based trait assessment. With respect to the same domains, state emotions were assessed in Study 3 (N = 121; 8th and 11th graders) by employing an experience sampling approach. In line with our initial assumptions, between-domain relations of trait but not state academic emotions reflected between-domain relations of domain characteristics. Implications for research and practice are discussed. PMID:25374547

76 FR 41073 - Security Zones; Sector Southeastern New England Captain of the Port Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2011-07-13

.... ACTION: Final rule. SUMMARY: The Coast Guard is establishing security zones around cruise ships in the... creates security zones for all navigable waters around certain cruise ships in the Southeastern New... temporary security zone regulation in Sec. 165.T01-0864. On April 5, 2011, we published a notice of proposed...

Inference of domain-disease associations from domain-protein, protein-disease and disease-disease relationships.

PubMed

Zhang, Wangshu; Coba, Marcelo P; Sun, Fengzhu

2016-01-11

Protein domains can be viewed as portable units of biological function that defines the functional properties of proteins. Therefore, if a protein is associated with a disease, protein domains might also be associated and define disease endophenotypes. However, knowledge about such domain-disease relationships is rarely available. Thus, identification of domains associated with human diseases would greatly improve our understanding of the mechanism of human complex diseases and further improve the prevention, diagnosis and treatment of these diseases. Based on phenotypic similarities among diseases, we first group diseases into overlapping modules. We then develop a framework to infer associations between domains and diseases through known relationships between diseases and modules, domains and proteins, as well as proteins and disease modules. Different methods including Association, Maximum likelihood estimation (MLE), Domain-disease pair exclusion analysis (DPEA), Bayesian, and Parsimonious explanation (PE) approaches are developed to predict domain-disease associations. We demonstrate the effectiveness of all the five approaches via a series of validation experiments, and show the robustness of the MLE, Bayesian and PE approaches to the involved parameters. We also study the effects of disease modularization in inferring novel domain-disease associations. Through validation, the AUC (Area Under the operating characteristic Curve) scores for Bayesian, MLE, DPEA, PE, and Association approaches are 0.86, 0.84, 0.83, 0.83 and 0.79, respectively, indicating the usefulness of these approaches for predicting domain-disease relationships. Finally, we choose the Bayesian approach to infer domains associated with two common diseases, Crohn's disease and type 2 diabetes. The Bayesian approach has the best performance for the inference of domain-disease relationships. The predicted landscape between domains and diseases provides a more detailed view about the disease

77 FR 30245 - Safety Zones; Annual Fireworks Events in the Captain of the Port Detroit Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-22

...-AA00 Safety Zones; Annual Fireworks Events in the Captain of the Port Detroit Zone AGENCY: Coast Guard... by adding three permanent safety zones within the Captain of the Port Detroit Zone. This action is necessary to provide for the safety of life and property on navigable waters during each event. This action...

75 FR 19304 - Safety Zones; Annual Fireworks Events in the Captain of the Port Detroit Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-14

... zones for annual events in the Captain of the Port Detroit zone. This proposed rule adds events not... proposed rule will add additional events not previously published in the regulations found in 33 CFR 165...-AA00 Safety Zones; Annual Fireworks Events in the Captain of the Port Detroit Zone AGENCY: Coast Guard...

78 FR 24679 - Safety Zones; Fireworks Displays in Captain of the Port Long Island Sound Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2013-04-26

...-AA00 Safety Zones; Fireworks Displays in Captain of the Port Long Island Sound Zone AGENCY: Coast Guard... zones for fireworks displays within the Captain of the Port (COTP) Long Island Sound (LIS) Zone. This... Sector Long Island Sound. DATES: This rule is effective from April 27, 2013, until June 22, 2013. This...

Improving the Effectiveness of Speaker Verification Domain Adaptation With Inadequate In-Domain Data

DTIC Science & Technology

2017-08-20

Improving the Effectiveness of Speaker Verification Domain Adaptation With Inadequate In-Domain Data Bengt J. Borgström1, Elliot Singer1, Douglas...ll.mit.edu.edu, dar@ll.mit.edu, es@ll.mit.edu, omid.sadjadi@nist.gov Abstract This paper addresses speaker verification domain adaptation with...contain speakers with low channel diversity. Existing domain adaptation methods are reviewed, and their shortcomings are discussed. We derive an

Evolution of domain promiscuity in eukaryotic genomes—a perspective from the inferred ancestral domain architectures†

PubMed Central

Cohen-Gihon, Inbar; Fong, Jessica H.; Sharan, Roded; Nussinov, Ruth

2012-01-01

Most eukaryotic proteins are composed of two or more domains. These assemble in a modular manner to create new proteins usually by the acquisition of one or more domains to an existing protein. Promiscuous domains which are found embedded in a variety of proteins and co-exist with many other domains are of particular interest and were shown to have roles in signaling pathways and mediating network communication. The evolution of domain promiscuity is still an open problem, mostly due to the lack of sequenced ancestral genomes. Here we use inferred domain architectures of ancestral genomes to trace the evolution of domain promiscuity in eukaryotic genomes. We find an increase in average promiscuity along many branches of the eukaryotic tree. Moreover, domain promiscuity can proceed at almost a steady rate over long evolutionary time or exhibit lineage-specific acceleration. We also observe that many signaling and regulatory domains gained domain promiscuity around the Bilateria divergence. In addition we show that those domains that played a role in the creation of two body axes and existed before the divergence of the bilaterians from fungi/metazoan achieve a boost in their promiscuities during the bilaterian evolution. PMID:21127809

Noise Configuration and fault zone anisotropy investigation from Taiwan Chelungpu-fault Deep Borehole Array

NASA Astrophysics Data System (ADS)

Hung, R. J.; Ma, K. F.; Song, T. R. A.; Nishida, K.; Lin, Y. Y.

2016-12-01

The Taiwan Chelungpu-fault Drilling Project was operated to understand the fault zone characteristics associated with the 1999 Chichi earthquake. Seven Borehole Seismometers (TCDPBHS) were installed through the identified fault zone to monitor the micro-seismic activities, as well as the fault-zone seismic structure properties. To understand the fault zone anisotropy and its possible temporal variations after the Chichi earthquake, we calculated cross-correlations of the noise at different stations to obtain cross correlation functions (CCFs) of the ambient noise field between every pair of the stations. The result shows that TCDP well site suffers from complex wavefield, and phase traveltime from CCF can't provide explicit result to determine the dominated wavefield. We first analyze the power density spectra and probability density functions of this array. We observe that the spectra show diurnal variation in the frequency band 1-25 Hz, suggesting human-generated sources are dominated in this frequency band. Then, we focus on the particle motion analysis at each CCF. We assume one component at a station plays as a visual source and compute the CCF tensor in other station components. The particle motion traces show high linearity which indicate that the dominated wavefield in our study area is body wave signals with the azimuth approximate to 60° from north. We also analyze the Fourier spectral amplitudes by rotating every 5 degrees in time domain to search for the maximum background energy distribution. The result shows that the spectral amplitudes are stronger at NE-SW direction, with shallow incident angles which are comparable with the CCF particle motion measurement. In order to obtain higher resolution about the dominated wavefield in our study area, we also used beamforming from surface station array to validate our results from CCF analysis. In addition to the CCF analysis to provide the noise configuration at the TCDPBHS site for further analysis on

33 CFR 3.70-15 - Sector Guam Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Sector Guam Marine Inspection Zone and Captain of the Port Zone. 3.70-15 Section 3.70-15 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY GENERAL COAST GUARD AREAS, DISTRICTS, SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Fourteenth...

Modeling work zone crash frequency by quantifying measurement errors in work zone length.

PubMed

Yang, Hong; Ozbay, Kaan; Ozturk, Ozgur; Yildirimoglu, Mehmet

2013-06-01

Work zones are temporary traffic control zones that can potentially cause safety problems. Maintaining safety, while implementing necessary changes on roadways, is an important challenge traffic engineers and researchers have to confront. In this study, the risk factors in work zone safety evaluation were identified through the estimation of a crash frequency (CF) model. Measurement errors in explanatory variables of a CF model can lead to unreliable estimates of certain parameters. Among these, work zone length raises a major concern in this analysis because it may change as the construction schedule progresses generally without being properly documented. This paper proposes an improved modeling and estimation approach that involves the use of a measurement error (ME) model integrated with the traditional negative binomial (NB) model. The proposed approach was compared with the traditional NB approach. Both models were estimated using a large dataset that consists of 60 work zones in New Jersey. Results showed that the proposed improved approach outperformed the traditional approach in terms of goodness-of-fit statistics. Moreover it is shown that the use of the traditional NB approach in this context can lead to the overestimation of the effect of work zone length on the crash occurrence. Copyright © 2013 Elsevier Ltd. All rights reserved.

Domain architecture conservation in orthologs

PubMed Central

2011-01-01

Background As orthologous proteins are expected to retain function more often than other homologs, they are often used for functional annotation transfer between species. However, ortholog identification methods do not take into account changes in domain architecture, which are likely to modify a protein's function. By domain architecture we refer to the sequential arrangement of domains along a protein sequence. To assess the level of domain architecture conservation among orthologs, we carried out a large-scale study of such events between human and 40 other species spanning the entire evolutionary range. We designed a score to measure domain architecture similarity and used it to analyze differences in domain architecture conservation between orthologs and paralogs relative to the conservation of primary sequence. We also statistically characterized the extents of different types of domain swapping events across pairs of orthologs and paralogs. Results The analysis shows that orthologs exhibit greater domain architecture conservation than paralogous homologs, even when differences in average sequence divergence are compensated for, for homologs that have diverged beyond a certain threshold. We interpret this as an indication of a stronger selective pressure on orthologs than paralogs to retain the domain architecture required for the proteins to perform a specific function. In general, orthologs as well as the closest paralogous homologs have very similar domain architectures, even at large evolutionary separation. The most common domain architecture changes observed in both ortholog and paralog pairs involved insertion/deletion of new domains, while domain shuffling and segment duplication/deletion were very infrequent. Conclusions On the whole, our results support the hypothesis that function conservation between orthologs demands higher domain architecture conservation than other types of homologs, relative to primary sequence conservation. This supports the

76 FR 7107 - Quarterly Listings; Safety Zones, Security Zones, Special Local Regulations, Drawbridge Operation...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-02-09

... USCG-2008-1113 Chicago, IL Safety Zones (Part 165)...... 11/4/2008 USCG-2008-1114 San Diego, CA Safety...)...... 1/10/2009 USCG-2008-1228 Chicago, IL Safety Zones (Part 165)...... 12/27/2008 USCG-2008-1242 San... USCG-2009-0079 Chicago, IL Safety Zones (Part 165)...... 2/8/2009 USCG-2009-0085 Chicago, IL Security...

75 FR 50700 - Quarterly Listings; Safety Zones, Security Zones, Special Local Regulations, and Drawbridge...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-08-17

... Morgan City--07-012 New Iberia, LO Safety Zones (Parts 147 and 10/2/2007 165). COTP Morgan City--07-014... Iberia, LO Safety Zones (Parts 147 and 10/11/2007 165). COTP San Francisco Bay 06-013 Carquinez Strait...-0043 Savannah, GA Security zones (Part 165)..... 1/24/2008 USCG-2008-0050 Atchafalaya Bay, LO...

Float Zone Workshop

NASA Technical Reports Server (NTRS)

Naumann, R. J.

1980-01-01

A summary of the Analytical Float Zone Experiment System (AFZES) concept is presented. The types of experiments considered for such a facility are discussed. Reports from various industrial producers and users of float zone material are presented. Special emphasis is placed on state-of-the-art developments in low gravity manufacturing and their applications to space processing.

Chemical Shift Assignments of the C-terminal Eps15 Homology Domain-3 EH Domain*

PubMed Central

Caplan, Steve; Sorgen, Paul L.

2013-01-01

The C-terminal Eps15 homology (EH) domain 3 (EHD3) belongs to a eukaryotic family of endocytic regulatory proteins and is involved in the recycling of various receptors from the early endosome to the endocytic recycling compartment or in retrograde transport from the endosomes to the Golgi. EH domains are highly conserved in the EHD family and function as protein-protein interaction units that bind to Asn-Pro-Phe (NPF) motif-containing proteins. The EH domain of EHD1 was the first C-terminal EH domain from the EHD family to be solved by NMR. The differences observed between this domain and proteins with N-terminal EH domains helped describe a mechanism for the differential binding of NPF-containing proteins. Here, structural studies were expanded to include the EHD3 EH domain. While the EHD1 and EHD3 EH domains are highly homologous, they have different protein partners. A comparison of these structures will help determine the selectivity in protein binding between the EHD family members and lead to a better understanding of their unique roles in endocytic regulation. PMID:23754701

Functional and Evolutionary Analysis of the CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN Family1[C][W

PubMed Central

Roppolo, Daniele; Boeckmann, Brigitte; Pfister, Alexandre; Boutet, Emmanuel; Rubio, Maria C.; Dénervaud-Tendon, Valérie; Vermeer, Joop E.M.; Gheyselinck, Jacqueline; Xenarios, Ioannis; Geldner, Niko

2014-01-01

CASPARIAN STRIP MEMBRANE DOMAIN PROTEINS (CASPs) are four-membrane-span proteins that mediate the deposition of Casparian strips in the endodermis by recruiting the lignin polymerization machinery. CASPs show high stability in their membrane domain, which presents all the hallmarks of a membrane scaffold. Here, we characterized the large family of CASP-like (CASPL) proteins. CASPLs were found in all major divisions of land plants as well as in green algae; homologs outside of the plant kingdom were identified as members of the MARVEL protein family. When ectopically expressed in the endodermis, most CASPLs were able to integrate the CASP membrane domain, which suggests that CASPLs share with CASPs the propensity to form transmembrane scaffolds. Extracellular loops are not necessary for generating the scaffold, since CASP1 was still able to localize correctly when either one of the extracellular loops was deleted. The CASP first extracellular loop was found conserved in euphyllophytes but absent in plants lacking Casparian strips, an observation that may contribute to the study of Casparian strip and root evolution. In Arabidopsis (Arabidopsis thaliana), CASPL showed specific expression in a variety of cell types, such as trichomes, abscission zone cells, peripheral root cap cells, and xylem pole pericycle cells. PMID:24920445

Internal Domains of Natural Porous Media Revealed: Critical Locations for Transport, Storage, and Chemical Reaction

DOE PAGES

Zachara, John; Brantley, Sue; Chorover, Jon; ...

2016-02-05

Internal pore domains exist within rocks, lithic fragments, subsurface sediments, and soil aggregates. These domains, termed internal domains in porous media (IDPM), represent a subset of a material’s porosity, contain a significant fraction of their porosity as nanopores, dominate the reactive surface area of diverse media types, and are important locations for chemical reactivity and fluid storage. IDPM are key features controlling hydrocarbon release from shales in hydraulic fracture systems, organic matter decomposition in soil, weathering and soil formation, and contaminant behavior in the vadose zone and groundwater. It is traditionally difficult to interrogate, advances in instrumentation and imaging methodsmore » are providing new insights on the physical structures and chemical attributes of IDPM, and their contributions to system behaviors. We discuss analytical methods to characterize IDPM, evaluate information on their size distributions, connectivity, and extended structures; determine whether they exhibit unique chemical reactivity; and assess the potential for their inclusion in reactive transport models. Moreover, ongoing developments in measurement technologies and sensitivity, and computer-assisted interpretation will improve understanding of these critical features in the future. Finally, impactful research opportunities exist to advance understanding of IDPM, and to incorporate their effects in reactive transport models for improved environmental simulation and prediction.« less

Risk factors and rate of progression for zone I versus zone II type 1 retinopathy of prematurity.

PubMed

Shin, Dong Hoon; Kong, Mingui; Kim, Sang Jin; Ham, Don Il; Kang, Se Woong; Chang, Yun Sil; Park, Won Soon

2014-04-01

To compare the risk factors and rate of progression of zone I versus zone II type 1 retinopathy of prematurity (ROP). The medical records of consecutive preterm infants with bilateral type 1 ROP in zone I and age-matched control infants with type 1 ROP in zone II were retrospectively analyzed. Fundus findings at each screening examination and systemic parameters were compared between groups. Univariate and conditional multivariate regression analyses were employed to identify variables significantly associated with zone I ROP. A total of 30 cases and 30 controls were included. The mean gestational age of included infants was 24.6 weeks in both groups, and the mean birth weights were 685 g in the zone I group and 667 g in the zone II group. The postmenstrual age (PMA) at the time of initial ROP detection did not differ between groups, but the PMA at the time of type 1 ROP detection was significantly earlier in the zone I group (mean, 34.9 vs 37.6 weeks). Conditional multiple logistic regression revealed that mechanical ventilation for 30 days or more was significantly associated with the type 1 ROP in zone I compared with zone II (OR, 3.5; 95% CI, 1.2-10.0). Zone I ROP exhibited rapid progression, necessitating close monitoring and prompt treatment. Compromised pulmonary function with associated mechanical ventilation in early life may restrict retinal vascular growth and increase the likelihood of zone I type 1 ROP. Copyright © 2014 American Association for Pediatric Ophthalmology and Strabismus. Published by Mosby, Inc. All rights reserved.

Simplicity and Specificity in Language: Domain-General Biases Have Domain-Specific Effects

PubMed Central

Culbertson, Jennifer; Kirby, Simon

2016-01-01

The extent to which the linguistic system—its architecture, the representations it operates on, the constraints it is subject to—is specific to language has broad implications for cognitive science and its relation to evolutionary biology. Importantly, a given property of the linguistic system can be “specific” to the domain of language in several ways. For example, if the property evolved by natural selection under the pressure of the linguistic function it serves then the property is domain-specific in the sense that its design is tailored for language. Equally though, if that property evolved to serve a different function or if that property is domain-general, it may nevertheless interact with the linguistic system in a way that is unique. This gives a second sense in which a property can be thought of as specific to language. An evolutionary approach to the language faculty might at first blush appear to favor domain-specificity in the first sense, with individual properties of the language faculty being specifically linguistic adaptations. However, we argue that interactions between learning, culture, and biological evolution mean any domain-specific adaptations that evolve will take the form of weak biases rather than hard constraints. Turning to the latter sense of domain-specificity, we highlight a very general bias, simplicity, which operates widely in cognition and yet interacts with linguistic representations in domain-specific ways. PMID:26793132

77 FR 42176 - Safety Zones; Annual Fireworks Events in the Captain of the Port Detroit Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2012-07-18

... fireworks launch site located at position 41-34'-18.10'' N, 082-51'-18.70'' W (NAD 83). This zone will be... fireworks launch site located at position 41-39'- 19'' N, 082-48'-57'' W (NAD 83). This zone will be...'' W (NAD 83). This zone will be enforced one evening during the first week in July. The safety zone...

Petrologic and chemical changes in ductile shear zones as a function of depth in the continental crust

NASA Astrophysics Data System (ADS)

Yang, Xin-Yue

in the Parry Sound domain, Ontario, formed at upper amphibolite facies conditions. The deformation process of the shear zone involves fully plastic deformation and high-temperature dynamic recrystallization and annealing recovery of both quartz and plagioclase. Geochemical evidence indicates that the chemical changes in the deformed rocks resulted from mixing of mafic and felsic layers together with fluid-assisted mass transfer within the shear zone. A geochemical model that incorporates closed-system two-component mixing with open-system mass transfer can well explain the observed major and trace element data.

Phosphatidylinositol-4,5-Bisphosphate-Rich Plasma Membrane Patches Organize Active Zones of Endocytosis and Ruffling in Cultured Adipocytes

PubMed Central

Huang, Shaohui; Lifshitz, Larry; Patki-Kamath, Varsha; Tuft, Richard; Fogarty, Kevin; Czech, Michael P.

2004-01-01

A major regulator of endocytosis and cortical F-actin is thought to be phosphatidylinositol-4,5-bisphosphate [PtdIns(4,5)P2] present in plasma membranes. Here we report that in 3T3-L1 adipocytes, clathrin-coated membrane retrieval and dense concentrations of polymerized actin occur in restricted zones of high endocytic activity. Ultrafast-acquisition and superresolution deconvolution microscopy of cultured adipocytes expressing an enhanced green fluorescent protein- or enhanced cyan fluorescent protein (ECFP)-tagged phospholipase Cδ1 (PLCδ1) pleckstrin homology (PH) domain reveals that these zones spatially coincide with large-scale PtdIns(4,5)P2-rich plasma membrane patches (PRMPs). PRMPs exhibit lateral dimensions exceeding several micrometers, are relatively stationary, and display extensive local membrane folding that concentrates PtdIns(4,5)P2 in three-dimensional space. In addition, a higher concentration of PtdIns(4,5)P2 in the membranes of PRMPs than in other regions of the plasma membrane can be detected by quantitative fluorescence microscopy. Vesicular structures containing both clathrin heavy chains and PtdIns(4,5)P2 are revealed immediately beneath PRMPs, as is dense F actin. Blockade of PtdIns(4,5)P2 function in PRMPs by high expression of the ECFP-tagged PLCδ1 PH domain inhibits transferrin endocytosis and reduces the abundance of cortical F-actin. Membrane ruffles induced by the expression of unconventional myosin 1c were also found to localize at PRMPs. These results are consistent with the hypothesis that PRMPs organize active PtdIns(4,5)P2 signaling zones in the adipocyte plasma membrane that in turn control regulators of endocytosis, actin dynamics, and membrane ruffling. PMID:15456883

Protein domain organisation: adding order.

PubMed

Kummerfeld, Sarah K; Teichmann, Sarah A

2009-01-29

Domains are the building blocks of proteins. During evolution, they have been duplicated, fused and recombined, to produce proteins with novel structures and functions. Structural and genome-scale studies have shown that pairs or groups of domains observed together in a protein are almost always found in only one N to C terminal order and are the result of a single recombination event that has been propagated by duplication of the multi-domain unit. Previous studies of domain organisation have used graph theory to represent the co-occurrence of domains within proteins. We build on this approach by adding directionality to the graphs and connecting nodes based on their relative order in the protein. Most of the time, the linear order of domains is conserved. However, using the directed graph representation we have identified non-linear features of domain organization that are over-represented in genomes. Recognising these patterns and unravelling how they have arisen may allow us to understand the functional relationships between domains and understand how the protein repertoire has evolved. We identify groups of domains that are not linearly conserved, but instead have been shuffled during evolution so that they occur in multiple different orders. We consider 192 genomes across all three kingdoms of life and use domain and protein annotation to understand their functional significance. To identify these features and assess their statistical significance, we represent the linear order of domains in proteins as a directed graph and apply graph theoretical methods. We describe two higher-order patterns of domain organisation: clusters and bi-directionally associated domain pairs and explore their functional importance and phylogenetic conservation. Taking into account the order of domains, we have derived a novel picture of global protein organization. We found that all genomes have a higher than expected degree of clustering and more domain pairs in forward and

33 CFR 3.55-10 - Sector Los Angeles-Long Beach Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Marine Inspection Zone and Captain of the Port Zone. 3.55-10 Section 3.55-10 Navigation and Navigable... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Eleventh Coast Guard District § 3.55-10 Sector Los Angeles-Long Beach Marine Inspection Zone and Captain of the Port Zone. Sector Los Angeles-Long Beach's (LA-LB...

33 CFR 3.55-10 - Sector Los Angeles-Long Beach Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Marine Inspection Zone and Captain of the Port Zone. 3.55-10 Section 3.55-10 Navigation and Navigable... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Eleventh Coast Guard District § 3.55-10 Sector Los Angeles-Long Beach Marine Inspection Zone and Captain of the Port Zone. Sector Los Angeles-Long Beach's (LA-LB...

33 CFR 3.55-10 - Sector Los Angeles-Long Beach Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Marine Inspection Zone and Captain of the Port Zone. 3.55-10 Section 3.55-10 Navigation and Navigable... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Eleventh Coast Guard District § 3.55-10 Sector Los Angeles-Long Beach Marine Inspection Zone and Captain of the Port Zone. Sector Los Angeles-Long Beach's (LA-LB...

33 CFR 3.55-10 - Sector Los Angeles-Long Beach Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Marine Inspection Zone and Captain of the Port Zone. 3.55-10 Section 3.55-10 Navigation and Navigable... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Eleventh Coast Guard District § 3.55-10 Sector Los Angeles-Long Beach Marine Inspection Zone and Captain of the Port Zone. Sector Los Angeles-Long Beach's (LA-LB...

33 CFR 3.55-10 - Sector Los Angeles-Long Beach Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Marine Inspection Zone and Captain of the Port Zone. 3.55-10 Section 3.55-10 Navigation and Navigable... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Eleventh Coast Guard District § 3.55-10 Sector Los Angeles-Long Beach Marine Inspection Zone and Captain of the Port Zone. Sector Los Angeles-Long Beach's (LA-LB...

47 CFR 5.313 - Innovation zones.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 47 Telecommunication 1 2014-10-01 2014-10-01 false Innovation zones. 5.313 Section 5.313... Licenses § 5.313 Innovation zones. (a) An innovation zone is a specified geographic location with pre... own motion or in response to a request from the public. Innovation zones will be announced via public...

47 CFR 5.313 - Innovation zones.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 47 Telecommunication 1 2013-10-01 2013-10-01 false Innovation zones. 5.313 Section 5.313... Licenses § 5.313 Innovation zones. (a) An innovation zone is a specified geographic location with pre... own motion or in response to a request from the public. Innovation zones will be announced via public...

Laser Vacuum Furnace for Zone Refining

NASA Technical Reports Server (NTRS)

Griner, D. B.; Zurburg, F. W.; Penn, W. M.

1986-01-01

Laser beam scanned to produce moving melt zone. Experimental laser vacuum furnace scans crystalline wafer with high-power CO2-laser beam to generate precise melt zone with precise control of temperature gradients around zone. Intended for zone refining of silicon or other semiconductors in low gravity, apparatus used in normal gravity.

78 FR 59313 - Safety Zones; Captain of the Port Boston Fireworks Display Zones, Boston Harbor, Boston, MA

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-26

...-AA00 Safety Zones; Captain of the Port Boston Fireworks Display Zones, Boston Harbor, Boston, MA AGENCY... establish six permanent safety zones throughout Boston Inner Harbor to be enforced during fireworks displays. These six permanent safety zones would expedite public notification of a fireworks event and ensure the...

Spectral nudging to eliminate the effects of domain position and geometry in regional climate model simulations

NASA Astrophysics Data System (ADS)

Miguez-Macho, Gonzalo; Stenchikov, Georgiy L.; Robock, Alan

2004-07-01

It is well known that regional climate simulations are sensitive to the size and position of the domain chosen for calculations. Here we study the physical mechanisms of this sensitivity. We conducted simulations with the Regional Atmospheric Modeling System (RAMS) for June 2000 over North America at 50 km horizontal resolution using a 7500 km × 5400 km grid and NCEP/NCAR reanalysis as boundary conditions. The position of the domain was displaced in several directions, always maintaining the U.S. in the interior, out of the buffer zone along the lateral boundaries. Circulation biases developed a large scale structure, organized by the Rocky Mountains, resulting from a systematic shifting of the synoptic wave trains that crossed the domain. The distortion of the large-scale circulation was produced by interaction of the modeled flow with the lateral boundaries of the nested domain and varied when the position of the grid was altered. This changed the large-scale environment among the different simulations and translated into diverse conditions for the development of the mesoscale processes that produce most of precipitation for the Great Plains in the summer season. As a consequence, precipitation results varied, sometimes greatly, among the experiments with the different grid positions. To eliminate the dependence of results on the position of the domain, we used spectral nudging of waves longer than 2500 km above the boundary layer. Moisture was not nudged at any level. This constrained the synoptic scales to follow reanalysis while allowing the model to develop the small-scale dynamics responsible for the rainfall. Nudging of the large scales successfully eliminated the variation of precipitation results when the grid was moved. We suggest that this technique is necessary for all downscaling studies with regional models with domain sizes of a few thousand kilometers and larger embedded in global models.

Seasonality of coastal zone scanner phytoplankton pigment in the offshore oceans

NASA Technical Reports Server (NTRS)

Banse, K.; English, D. C.

1994-01-01

The NASA Global Ocean Data Set of plant pigment concentrations in the upper euphotic zone is evaluated for diserning geographical and temporal patterns of seasonality in the open sea. Monthly medians of pigment concentrations for all available years are generated for fields of approximately 77,000 sq km. For the climatological year, highest and lowest medians, month of occurence of the highest median, ratio of highest to lowest medians, and absolute range between the highest and lowest medians are mapped ocean-wide between 62.5 deg N and 62.5 deg S. Seasonal cycles are depicted for 48 sites. In much of the offshore ocean, seasonality of pigment is inferred to be driven almost equally by the interaction of the abiotic environment with phytoplankton physiology and the loss of cells from grazing. Special emphasis among natural domains or provinces is given to the Subantarctic water ring, with no seasonality in its low chlorophyll concentrations in spite of strong environmental forcing, and the narrow Transition Zones, a few degrees of latitude on the equatorial sides of the Subtropical Convergences of the southern hemisphere and their homologs in the northern hemisphere, which have late winter blooms caused by nutrient injection into the upper layers.

Visualizing ferromagnetic domains in undoped and Fe-doped Sr4Ru3O10

NASA Astrophysics Data System (ADS)

Sass, Paul; Wu, Weida; Mao, Zhiqiang; Li, Peigang

Transition-metal oxides have proven to be a great source of interesting phenomena and new quantum phases of matter with high potential for developing exciting technologies. A remarkable sub-class of these materials with layer dependent properties is the ruthenium perovskites of the Ruddlesden-Popper series, specifically Srn + 1RunO3 n + 1 , exhibiting a range of behavior from ferromagnetism and metamagnetic quantum criticality to p-wave superconductivity. The triple layered oxide Sr4Ru3O10 exhibits coexistence of ferro- (TC < 105 K) and meta- (TM < 50 K) magnetism with strong anisotropy. Despite many studies on bulk magnetic properties of this material, the microscopic nature of the magnetic phase is still unclear. What is lacking is the real space imaging of magnetic domains. To this end, we report our variable temperature magnetic force microscopy studies on floating-zone grown undoped and Fe-doped Sr4Ru3O10 single crystals. Various stripe and branch-like domain patterns were observed below This work is supported by DOE BES under award DE-SC0008147.

Emergence of novel domains in proteins

PubMed Central

2013-01-01

Background Proteins are composed of a combination of discrete, well-defined, sequence domains, associated with specific functions that have arisen at different times during evolutionary history. The emergence of novel domains is related to protein functional diversification and adaptation. But currently little is known about how novel domains arise and how they subsequently evolve. Results To gain insights into the impact of recently emerged domains in protein evolution we have identified all human young protein domains that have emerged in approximately the past 550 million years. We have classified them into vertebrate-specific and mammalian-specific groups, and compared them to older domains. We have found 426 different annotated young domains, totalling 995 domain occurrences, which represent about 12.3% of all human domains. We have observed that 61.3% of them arose in newly formed genes, while the remaining 38.7% are found combined with older domains, and have very likely emerged in the context of a previously existing protein. Young domains are preferentially located at the N-terminus of the protein, indicating that, at least in vertebrates, novel functional sequences often emerge there. Furthermore, young domains show significantly higher non-synonymous to synonymous substitution rates than older domains using human and mouse orthologous sequence comparisons. This is also true when we compare young and old domains located in the same protein, suggesting that recently arisen domains tend to evolve in a less constrained manner than older domains. Conclusions We conclude that proteins tend to gain domains over time, becoming progressively longer. We show that many proteins are made of domains of different age, and that the fastest evolving parts correspond to the domains that have been acquired more recently. PMID:23425224

33 CFR 165.20 - Safety zones.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Safety zones. 165.20 Section 165... WATERWAYS SAFETY REGULATED NAVIGATION AREAS AND LIMITED ACCESS AREAS Safety Zones § 165.20 Safety zones. A Safety Zone is a water area, shore area, or water and shore area to which, for safety or environmental...

33 CFR 165.20 - Safety zones.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Safety zones. 165.20 Section 165... WATERWAYS SAFETY REGULATED NAVIGATION AREAS AND LIMITED ACCESS AREAS Safety Zones § 165.20 Safety zones. A Safety Zone is a water area, shore area, or water and shore area to which, for safety or environmental...

33 CFR 165.30 - Security zones.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 2 2010-07-01 2010-07-01 false Security zones. 165.30 Section... AND WATERWAYS SAFETY REGULATED NAVIGATION AREAS AND LIMITED ACCESS AREAS Security Zones § 165.30 Security zones. (a) A security zone is an area of land, water, or land and water which is so designated by...

Application of Feature-Oriented Domain Analysis to the Army Movement Control Domain (Appendices A-I)

DTIC Science & Technology

1992-06-01

Cohen, James A. Hess, William E. Novak, & A. Spen- cer Peterson. Feature-Oriented Domain Analysis ( FODA ) Feasibility Study (CMU/SEI-90- TR-21...Oriented Domain Analysis to the Army Movement Control Domain (Appendices A -1) Sholom G. Cohen Jay L. Stanley, Jr. A. Spencer Peterson Robert W...Appendices) June 1992 Application of Feature-Oriented Domain Analysis to the Army Movement Control Domain (Appendices A -1) Sholom G. Cohen Jay L

19 CFR 146.7 - Zone changes.

Code of Federal Regulations, 2013 CFR

2013-04-01

... common or contract carriers transporting goods to or from the zone. [T.D. 86-16, 51 FR 5049, Feb. 11... 19 Customs Duties 2 2013-04-01 2013-04-01 false Zone changes. 146.7 Section 146.7 Customs Duties U... (CONTINUED) FOREIGN TRADE ZONES General Provisions § 146.7 Zone changes. (a) Alteration of an activated area...

19 CFR 146.7 - Zone changes.

Code of Federal Regulations, 2014 CFR

2014-04-01

... common or contract carriers transporting goods to or from the zone. [T.D. 86-16, 51 FR 5049, Feb. 11... 19 Customs Duties 2 2014-04-01 2014-04-01 false Zone changes. 146.7 Section 146.7 Customs Duties U... (CONTINUED) FOREIGN TRADE ZONES General Provisions § 146.7 Zone changes. (a) Alteration of an activated area...

19 CFR 146.7 - Zone changes.

Code of Federal Regulations, 2012 CFR

2012-04-01

... common or contract carriers transporting goods to or from the zone. [T.D. 86-16, 51 FR 5049, Feb. 11... 19 Customs Duties 2 2012-04-01 2012-04-01 false Zone changes. 146.7 Section 146.7 Customs Duties U... (CONTINUED) FOREIGN TRADE ZONES General Provisions § 146.7 Zone changes. (a) Alteration of an activated area...

19 CFR 146.7 - Zone changes.

Code of Federal Regulations, 2010 CFR

2010-04-01

... common or contract carriers transporting goods to or from the zone. [T.D. 86-16, 51 FR 5049, Feb. 11... 19 Customs Duties 2 2010-04-01 2010-04-01 false Zone changes. 146.7 Section 146.7 Customs Duties U... (CONTINUED) FOREIGN TRADE ZONES General Provisions § 146.7 Zone changes. (a) Alteration of an activated area...

19 CFR 146.7 - Zone changes.

Code of Federal Regulations, 2011 CFR

2011-04-01

... common or contract carriers transporting goods to or from the zone. [T.D. 86-16, 51 FR 5049, Feb. 11... 19 Customs Duties 2 2011-04-01 2011-04-01 false Zone changes. 146.7 Section 146.7 Customs Duties U... (CONTINUED) FOREIGN TRADE ZONES General Provisions § 146.7 Zone changes. (a) Alteration of an activated area...

77 FR 66072 - Designation of New Grantee; Foreign Trade Zone 66, Wilmington, NC, and Foreign-Trade Zone 67...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-11-01

... DEPARTMENT OF COMMERCE Foreign-Trade Zones Board [Order No. 1861] Designation of New Grantee; Foreign Trade Zone 66, Wilmington, NC, and Foreign-Trade Zone 67, Morehead City, NC Pursuant to its authority under the Foreign-Trade Zones Act of June 18, 1934, as amended (19 U.S.C. 81a-81u), and the Foreign-Trade Zones Board Regulations (15 CFR part...

33 CFR 3.35-35 - Sector St. Petersburg Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Sector St. Petersburg Marine... ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-35 Sector St. Petersburg Marine Inspection Zone and Captain of the Port Zone. Sector St. Petersburg's sector office is located in St...

Recovering Protein-Protein and Domain-Domain Interactions from Aggregation of IP-MS Proteomics of Coregulator Complexes

PubMed Central

Mazloom, Amin R.; Dannenfelser, Ruth; Clark, Neil R.; Grigoryan, Arsen V.; Linder, Kathryn M.; Cardozo, Timothy J.; Bond, Julia C.; Boran, Aislyn D. W.; Iyengar, Ravi; Malovannaya, Anna; Lanz, Rainer B.; Ma'ayan, Avi

2011-01-01

Coregulator proteins (CoRegs) are part of multi-protein complexes that transiently assemble with transcription factors and chromatin modifiers to regulate gene expression. In this study we analyzed data from 3,290 immuno-precipitations (IP) followed by mass spectrometry (MS) applied to human cell lines aimed at identifying CoRegs complexes. Using the semi-quantitative spectral counts, we scored binary protein-protein and domain-domain associations with several equations. Unlike previous applications, our methods scored prey-prey protein-protein interactions regardless of the baits used. We also predicted domain-domain interactions underlying predicted protein-protein interactions. The quality of predicted protein-protein and domain-domain interactions was evaluated using known binary interactions from the literature, whereas one protein-protein interaction, between STRN and CTTNBP2NL, was validated experimentally; and one domain-domain interaction, between the HEAT domain of PPP2R1A and the Pkinase domain of STK25, was validated using molecular docking simulations. The scoring schemes presented here recovered known, and predicted many new, complexes, protein-protein, and domain-domain interactions. The networks that resulted from the predictions are provided as a web-based interactive application at http://maayanlab.net/HT-IP-MS-2-PPI-DDI/. PMID:22219718

Full waveform inversion in the frequency domain using classified time-domain residual wavefields

NASA Astrophysics Data System (ADS)

Son, Woohyun; Koo, Nam-Hyung; Kim, Byoung-Yeop; Lee, Ho-Young; Joo, Yonghwan

2017-04-01

We perform the acoustic full waveform inversion in the frequency domain using residual wavefields that have been separated in the time domain. We sort the residual wavefields in the time domain according to the order of absolute amplitudes. Then, the residual wavefields are separated into several groups in the time domain. To analyze the characteristics of the residual wavefields, we compare the residual wavefields of conventional method with those of our residual separation method. From the residual analysis, the amplitude spectrum obtained from the trace before separation appears to have little energy at the lower frequency bands. However, the amplitude spectrum obtained from our strategy is regularized by the separation process, which means that the low-frequency components are emphasized. Therefore, our method helps to emphasize low-frequency components of residual wavefields. Then, we generate the frequency-domain residual wavefields by taking the Fourier transform of the separated time-domain residual wavefields. With these wavefields, we perform the gradient-based full waveform inversion in the frequency domain using back-propagation technique. Through a comparison of gradient directions, we confirm that our separation method can better describe the sub-salt image than the conventional approach. The proposed method is tested on the SEG/EAGE salt-dome model. The inversion results show that our algorithm is better than the conventional gradient based waveform inversion in the frequency domain, especially for deeper parts of the velocity model.

Apoplastic domains and sub-domains in the shoots of etiolated corn seedlings

NASA Technical Reports Server (NTRS)

Epel, B. L.; Bandurski, R. S.

1990-01-01

Light Green, an apoplastic probe, was applied to the cut mesocotyl base or to the cut coleoptile apex of etiolated seedlings of Zea mays L. cv. Silver Queen. Probe transport was measured and its tissue distribution determined. In the mesocotyl, there is an apoplastic barrier between cortex and stele. This barrier creates two apoplastic domains which are non-communicating. A kinetic barrier exists between the apoplast of the mesocotyl stele and that of the coleoptile. This kinetic barrier is not absolute and there is limited communication between the apoplasts of the two regions. This kinetic barrier effectively creates two sub-domains. In the coleoptile, there is communication between the apoplast of the vascular strands and that of the surrounding cortical tissue. No apoplastic communication was observed between the coleoptile cortex and the mesocotyl cortex. Thus, the apoplastic space of the coleoptile cortex is a sub-domain of the integrated coleoptile domain and is separate from that of the apoplastic domain of the mesocotyl cortex.

Domains in Ferroelectric Nanostructures

NASA Astrophysics Data System (ADS)

Gregg, Marty

2010-03-01

Ferroelectric materials have great potential in influencing the future of small scale electronics. At a basic level, this is because ferroelectric surfaces are charged, and so interact strongly with charge-carrying metals and semiconductors - the building blocks for all electronic systems. Since the electrical polarity of the ferroelectric can be reversed, surfaces can both attract and repel charges in nearby materials, and can thereby exert complete control over both charge distribution and movement. It should be no surprise, therefore, that microelectronics industries have already looked very seriously at harnessing ferroelectric materials in a variety of applications, from solid state memory chips (FeRAMs) to field effect transistors (FeFETs). In all such applications, switching the direction of the polarity of the ferroelectric is a key aspect of functional behavior. The mechanism for switching involves the field-induced nucleation and growth of domains. Domain coarsening, through domain wall propagation, eventually causes the entire ferroelectric to switch its polar direction. It is thus the existence and behavior of domains that determine the switching response, and ultimately the performance of the ferroelectric device. A major issue, associated with the integration of ferroelectrics into microelectronic devices, has been that the fundamental properties associated with ferroelectrics, when in bulk form, appear to change quite dramatically and unpredictably when at the nanoscale: new modes of behaviour, and different functional characteristics from those seen in bulk appear. For domains, in particular, the proximity of surfaces and boundaries have a dramatic effect: surface tension and depolarizing fields both serve to increase the equilibrium density of domains, such that minor changes in scale or morphology can have major ramifications for domain redistribution. Given the importance of domains in dictating the overall switching characteristics of a device

Institutionalizing the Human Domain: Achieving Cross Domain Synergy for Every Day Missions

DTIC Science & Technology

2017-04-06

AIR WAR COLLEGE AIR UNIVERSITY INSTITUTIONALIZING THE HUMAN DOMAIN: ACHIEVING CROSS DOMAIN SYNERGY FOR “EVERY DAY ” MISSIONS by...war. Next, this paper will focus on the importance of the Human Domain as it relates to success within every day missions of the U.S. Military and...socially complex environment. History demonstrates that the U.S. Military has and will continue to conduct these every day missions amongst the

77 FR 75559 - Safety Zone; Fireworks Event in Captain of the Port New York Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2012-12-21

... DEPARTMENT OF HOMELAND SECURITY Coast Guard 33 CFR Part 165 [Docket No. USCG-2012-1064] Safety Zone; Fireworks Event in Captain of the Port New York Zone AGENCY: Coast Guard, DHS. ACTION: Notice of enforcement of regulation. SUMMARY: The Coast Guard will enforce a safety zone in the Captain of the Port New...

33 CFR 3.25-10 - Sector Hampton Roads Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Sector Hampton Roads Marine... ZONES, AND CAPTAIN OF THE PORT ZONES Fifth Coast Guard District § 3.25-10 Sector Hampton Roads Marine Inspection Zone and Captain of the Port Zone. Sector Hampton Roads' office is located in Portsmouth, VA. The...

33 CFR 3.65-10 - Sector Puget Sound Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Sector Puget Sound Marine... ZONES, AND CAPTAIN OF THE PORT ZONES Thirteenth Coast Guard District § 3.65-10 Sector Puget Sound Marine Inspection Zone and Captain of the Port Zone. Sector Puget Sound's office is located in Seattle, WA. The...

33 CFR 3.65-10 - Sector Puget Sound Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Sector Puget Sound Marine... ZONES, AND CAPTAIN OF THE PORT ZONES Thirteenth Coast Guard District § 3.65-10 Sector Puget Sound Marine Inspection Zone and Captain of the Port Zone. Sector Puget Sound's office is located in Seattle, WA. The...

33 CFR 3.65-10 - Sector Puget Sound Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Sector Puget Sound Marine... ZONES, AND CAPTAIN OF THE PORT ZONES Thirteenth Coast Guard District § 3.65-10 Sector Puget Sound Marine Inspection Zone and Captain of the Port Zone. Sector Puget Sound's office is located in Seattle, WA. The...

Continuous monitoring of water flow and solute transport using vadose zone monitoring technology

NASA Astrophysics Data System (ADS)

Dahan, O.

2009-04-01

Groundwater contamination is usually attributed to pollution events that initiate on land surface. These may be related to various sources such as industrial, urban or agricultural, and may appear as point or non point sources, through a single accidental event or a continuous pollution process. In all cases, groundwater pollution is a consequence of pollutant transport processes that take place in the vadose zone above the water table. Attempts to control pollution events and prevent groundwater contamination usually involve groundwater monitoring programs. This, however, can not provide any protection against contamination since pollution identification in groundwater is clear evidence that the groundwater is already polluted and contaminants have already traversed the entire vadose zone. Accordingly, an efficient monitoring program that aims at providing information that may prevent groundwater pollution has to include vadose-zone monitoring systems. Such system should provide real-time information on the hydrological and chemical properties of the percolating water and serve as an early warning system capable of detecting pollution events in their early stages before arrival of contaminants to groundwater. Recently, a vadose-zone monitoring system (VMS) was developed to allow continuous monitoring of the hydrological and chemical properties of percolating water in the deep vadose zone. The VMS includes flexible time-domain reflectometry (FTDR) probes for continuous tracking of water content profiles, and vadose-zone sampling ports (VSPs) for frequent sampling of the deep vadose pore water at multiple depths. The monitoring probes and sampling ports are installed through uncased slanted boreholes using a flexible sleeve that allows attachment of the monitoring devices to the borehole walls while achieving good contact between the sensors and the undisturbed sediment column. The system has been successfully implemented in several studies on water flow and

DIMA 3.0: Domain Interaction Map.

PubMed

Luo, Qibin; Pagel, Philipp; Vilne, Baiba; Frishman, Dmitrij

2011-01-01

Domain Interaction MAp (DIMA, available at http://webclu.bio.wzw.tum.de/dima) is a database of predicted and known interactions between protein domains. It integrates 5807 structurally known interactions imported from the iPfam and 3did databases and 46,900 domain interactions predicted by four computational methods: domain phylogenetic profiling, domain pair exclusion algorithm correlated mutations and domain interaction prediction in a discriminative way. Additionally predictions are filtered to exclude those domain pairs that are reported as non-interacting by the Negatome database. The DIMA Web site allows to calculate domain interaction networks either for a domain of interest or for entire organisms, and to explore them interactively using the Flash-based Cytoscape Web software.

49 CFR 71.12 - Hawaii-Aleutian zone.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 49 Transportation 1 2010-10-01 2010-10-01 false Hawaii-Aleutian zone. 71.12 Section 71.12 Transportation Office of the Secretary of Transportation STANDARD TIME ZONE BOUNDARIES § 71.12 Hawaii-Aleutian zone. The seventh zone, the Hawaii-Aleutian standard time zone, includes the entire State of Hawaii and...

19 CFR 146.44 - Zone-restricted status.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 19 Customs Duties 2 2010-04-01 2010-04-01 false Zone-restricted status. 146.44 Section 146.44... TREASURY (CONTINUED) FOREIGN TRADE ZONES Status of Merchandise in a Zone § 146.44 Zone-restricted status. (a) General. Merchandise taken into a zone for the sole purpose of exportation, destruction (except...

Experimental tests of truncated diffusion in fault damage zones

NASA Astrophysics Data System (ADS)

Suzuki, Anna; Hashida, Toshiyuki; Li, Kewen; Horne, Roland N.

2016-11-01

Fault zones affect the flow paths of fluids in groundwater aquifers and geological reservoirs. Fault-related fracture damage decreases to background levels with increasing distance from the fault core according to a power law. This study investigated mass transport in such a fault-related structure using nonlocal models. A column flow experiment is conducted to create a permeability distribution that varies with distance from a main conduit. The experimental tracer response curve is preasymptotic and implies subdiffusive transport, which is slower than the normal Fickian diffusion. If the surrounding area is a finite domain, an upper truncated behavior in tracer response (i.e., exponential decline at late times) is observed. The tempered anomalous diffusion (TAD) model captures the transition from subdiffusive to Fickian transport, which is characterized by a smooth transition from power-law to an exponential decline in the late-time breakthrough curves.

Domain fusion analysis by applying relational algebra to protein sequence and domain databases.

PubMed

Truong, Kevin; Ikura, Mitsuhiko

2003-05-06

Domain fusion analysis is a useful method to predict functionally linked proteins that may be involved in direct protein-protein interactions or in the same metabolic or signaling pathway. As separate domain databases like BLOCKS, PROSITE, Pfam, SMART, PRINTS-S, ProDom, TIGRFAMs, and amalgamated domain databases like InterPro continue to grow in size and quality, a computational method to perform domain fusion analysis that leverages on these efforts will become increasingly powerful. This paper proposes a computational method employing relational algebra to find domain fusions in protein sequence databases. The feasibility of this method was illustrated on the SWISS-PROT+TrEMBL sequence database using domain predictions from the Pfam HMM (hidden Markov model) database. We identified 235 and 189 putative functionally linked protein partners in H. sapiens and S. cerevisiae, respectively. From scientific literature, we were able to confirm many of these functional linkages, while the remainder offer testable experimental hypothesis. Results can be viewed at http://calcium.uhnres.utoronto.ca/pi. As the analysis can be computed quickly on any relational database that supports standard SQL (structured query language), it can be dynamically updated along with the sequence and domain databases, thereby improving the quality of predictions over time.

Domain fusion analysis by applying relational algebra to protein sequence and domain databases

PubMed Central

Truong, Kevin; Ikura, Mitsuhiko

2003-01-01

Background Domain fusion analysis is a useful method to predict functionally linked proteins that may be involved in direct protein-protein interactions or in the same metabolic or signaling pathway. As separate domain databases like BLOCKS, PROSITE, Pfam, SMART, PRINTS-S, ProDom, TIGRFAMs, and amalgamated domain databases like InterPro continue to grow in size and quality, a computational method to perform domain fusion analysis that leverages on these efforts will become increasingly powerful. Results This paper proposes a computational method employing relational algebra to find domain fusions in protein sequence databases. The feasibility of this method was illustrated on the SWISS-PROT+TrEMBL sequence database using domain predictions from the Pfam HMM (hidden Markov model) database. We identified 235 and 189 putative functionally linked protein partners in H. sapiens and S. cerevisiae, respectively. From scientific literature, we were able to confirm many of these functional linkages, while the remainder offer testable experimental hypothesis. Results can be viewed at . Conclusion As the analysis can be computed quickly on any relational database that supports standard SQL (structured query language), it can be dynamically updated along with the sequence and domain databases, thereby improving the quality of predictions over time. PMID:12734020

Micro 3D ERT tomography for data assimilation modelling of active root zone

NASA Astrophysics Data System (ADS)

Vanella, Daniela; Busato, Laura; Boaga, Jacopo; Cassiani, Giorgio; Binley, Andrew; Putti, Mario; Consoli, Simona

2016-04-01

Within the soil-plant-atmosphere system, root activity plays a fundamental role, as it connects different domains and allows a large part of the water and nutrient exchanges necessary for plant sustenance. The understanding of these processes is not only useful from an environmental point of view, making a fundamental contribution to the understanding of the critical zone dynamics, but also plays a pivotal role in precision agriculture, where the optimisation of water resources exploitation is mandatory and often carried out through deficit irrigation techniques. In this work, we present the results of non-invasive monitoring of the active root zone of two orange trees (Citrus sinensis, cv Tarocco Ippolito) located in an orange orchard in eastern Sicily (Italy) and drip irrigated with two different techniques: partial root drying and 100% crop evapotranspiration. The main goal of the monitoring activity is to assess possible differences between the developed root systems and the root water uptake between the two irrigation strategies. The monitoring is conducted using 3D micro-electrical resistivity tomography (ERT) based on an apparatus composed of a number of micro-boreholes (about 1.2 m deep) housing 12 electrodes each, plus a number of surface electrodes. Time-lapse measurements conducted both with long-term periodicity and short-term repetition before and after irrigation clearly highlight the presence and distribution of root water uptake zone both at shallow and larger depth, likely to correspond to zones utilized during the irrigation period (shallow) and during the time when the crop is not irrigated (deep). Subsidiary information is available in terms of precipitation, sap flow measurements and micrometeorological evapotranspiration estimates. This data ensemble lends itself to the assimilation into a variably saturated flow model, where both soil hydraulic parameters and root distribution shall be identified. Preliminary results in this directions show

Work zone safety analysis.

DOT National Transportation Integrated Search

2013-11-01

This report presents research performed analyzing crashes in work zones in the state of New Jersey so as to : identify critical areas in work zones susceptible to crashes and key factors that contribute to these crashes. A field : data collection on ...

Pre-existing oblique transfer zones and transfer/transform relationships in continental margins: New insights from the southeastern Gulf of Aden, Socotra Island, Yemen

NASA Astrophysics Data System (ADS)

Bellahsen, N.; Leroy, S.; Autin, J.; Razin, P.; d'Acremont, E.; Sloan, H.; Pik, R.; Ahmed, A.; Khanbari, K.

2013-11-01

Transfer zones are ubiquitous features in continental rifts and margins, as are transform faults in oceanic lithosphere. Here, we present a structural study of the Hadibo Transfer Zone (HTZ), located in Socotra Island (Yemen) in the southeastern Gulf of Aden. There, we interpret this continental transfer fault zone to represent a reactivated pre-existing structure. Its trend is oblique to the direction of divergence and it has been active from the early up to the latest stages of rifting. One of the main oceanic fracture zones (FZ), the Hadibo-Sharbithat FZ, is aligned with and appears to be an extension of the HTZ and is probably genetically linked to it. Comparing this setting with observations from other Afro-Arabian rifts as well as with passive margins worldwide, it appears that many continental transfer zones are reactivated pre-existing structures, oblique to divergence. We therefore establish a classification system for oceanic FZ based upon their relationship with syn-rift structures. Type 1 FZ form at syn-rift structures and are late syn-rift to early syn-OCT. Type 2 FZ form during the OCT formation and Type 3 FZ form within the oceanic domain, after the oceanic spreading onset. The latter are controlled by far-field forces, magmatic processes, spreading rates, and oceanic crust rheology.

Domain-General and Domain-Specific Patterns of Activity Supporting Metacognition in Human Prefrontal Cortex

PubMed Central

2018-01-01

Metacognition is the capacity to evaluate the success of one's own cognitive processes in various domains; for example, memory and perception. It remains controversial whether metacognition relies on a domain-general resource that is applied to different tasks or if self-evaluative processes are domain specific. Here, we investigated this issue directly by examining the neural substrates engaged when metacognitive judgments were made by human participants of both sexes during perceptual and memory tasks matched for stimulus and performance characteristics. By comparing patterns of fMRI activity while subjects evaluated their performance, we revealed both domain-specific and domain-general metacognitive representations. Multivoxel activity patterns in anterior prefrontal cortex predicted levels of confidence in a domain-specific fashion, whereas domain-general signals predicting confidence and accuracy were found in a widespread network in the frontal and posterior midline. The demonstration of domain-specific metacognitive representations suggests the presence of a content-rich mechanism available to introspection and cognitive control. SIGNIFICANCE STATEMENT We used human neuroimaging to investigate processes supporting memory and perceptual metacognition. It remains controversial whether metacognition relies on a global resource that is applied to different tasks or if self-evaluative processes are specific to particular tasks. Using multivariate decoding methods, we provide evidence that perceptual- and memory-specific metacognitive representations coexist with generic confidence signals. Our findings reconcile previously conflicting results on the domain specificity/generality of metacognition and lay the groundwork for a mechanistic understanding of metacognitive judgments. PMID:29519851

Capture zones for simple aquifers

USGS Publications Warehouse

McElwee, Carl D.

1991-01-01

Capture zones showing the area influenced by a well within a certain time are useful for both aquifer protection and cleanup. If hydrodynamic dispersion is neglected, a deterministic curve defines the capture zone. Analytical expressions for the capture zones can be derived for simple aquifers. However, the capture zone equations are transcendental and cannot be explicitly solved for the coordinates of the capture zone boundary. Fortunately, an iterative scheme allows the solution to proceed quickly and efficiently even on a modest personal computer. Three forms of the analytical solution must be used in an iterative scheme to cover the entire region of interest, after the extreme values of the x coordinate are determined by an iterative solution. The resulting solution is a discrete one, and usually 100-1000 intervals along the x-axis are necessary for a smooth definition of the capture zone. The presented program is written in FORTRAN and has been used in a variety of computing environments. No graphics capability is included with the program; it is assumed the user has access to a commercial package. The superposition of capture zones for multiple wells is expected to be satisfactory if the spacing is not too close. Because this program deals with simple aquifers, the results rarely will be the final word in a real application.

Topological domain walls in helimagnets

NASA Astrophysics Data System (ADS)

Schoenherr, P.; Müller, J.; Köhler, L.; Rosch, A.; Kanazawa, N.; Tokura, Y.; Garst, M.; Meier, D.

2018-05-01

Domain walls naturally arise whenever a symmetry is spontaneously broken. They interconnect regions with different realizations of the broken symmetry, promoting structure formation from cosmological length scales to the atomic level1,2. In ferroelectric and ferromagnetic materials, domain walls with unique functionalities emerge, holding great promise for nanoelectronics and spintronics applications3-5. These walls are usually of Ising, Bloch or Néel type and separate homogeneously ordered domains. Here we demonstrate that a wide variety of new domain walls occurs in the presence of spatially modulated domain states. Using magnetic force microscopy and micromagnetic simulations, we show three fundamental classes of domain walls to arise in the near-room-temperature helimagnet iron germanium. In contrast to conventional ferroics, the domain walls exhibit a well-defined inner structure, which—analogous to cholesteric liquid crystals—consists of topological disclination and dislocation defects. Similar to the magnetic skyrmions that form in the same material6,7, the domain walls can carry a finite topological charge, permitting an efficient coupling to spin currents and contributions to a topological Hall effect. Our study establishes a new family of magnetic nano-objects with non-trivial topology, opening the door to innovative device concepts based on helimagnetic domain walls.

A "caliper" type of controlled-source, frequency-domain, electromagnetic sounding method

NASA Astrophysics Data System (ADS)

Zhang, W.; Lin, J.; Zhou, F.; Liu, C.; Chen, J.; Xue, K.; Liu, L.; Wu, Y.

2011-12-01

We developed a special measurement manner for controlled-source, frequency-domain, electromagnetic sounding method that can improve resolution and efficiency, called as "caliper". This manner is base on our array electromagnetic system DPS-I, which consists of 53 channels and can cover 2500 m survey line at one arrangement. There are several steps to apply this method. First, a rough measurement is carried out, using large dynamic range but sparse frequencies. The ratio of adjacent frequency is set to be 2 or 4. The frequency points cover the entire frequency band that is required according to the geological environment, and are almost equidistantly distributed at logarithmic axis. Receivers array are arranged in one or more survey lines to measure the amplitude and phase of electromagnetic field components simultaneously. After all frequency points for rough measurement are measured, data in each sub-receiver are transmitted to the controller and the apparent resistivity and phase are calculated in field quickly. Then the pseudo section diagrams of apparent resistivity and phase are drew. By the pseudo section we can roughly lock the abnormal zone and determine the frequency band required for detail investigation of abnormal zone. Next, the measurement using high density of frequencies in this frequency band is carried out, which we called "detailed measurement". The ratio of adjacent frequency in this time is m which lies between 1 and 2. The exact value of m will depend on how detailed that the user expected. After "detailed measurement" is finished, the pseudo section diagrams of apparent resistivity and phase are drew in the same way with the first step. We can see more detailed information about the abnormal zone and decide whether further measurement is necessary. If it is necessary, we can repeat the second step using smaller m until the resolution meet the requirements to distinguish the target. By simulation, we know that high density of frequencies

Visualizing Macular Structures During Membrane Peeling Surgery With an Intraoperative Spectral-Domain Optical Coherence Tomography Device.

PubMed

Leisser, Christoph; Hackl, Christoph; Hirnschall, Nino; Luft, Nikolaus; Döller, Birgit; Draschl, Petra; Rigal, Karl; Findl, Oliver

2016-04-01

The aim of this study was to examine the quality of intraoperative visualization of the posterior hyaloid, epiretinal membrane (ERM), inner limiting membrane (ILM), and hyporeflective subfoveal zone with a commercially available, microscope-integrated spectral-domain OCT setup (mi-SD-OCT) (Rescan 700; Carl Zeiss Meditec AG, Germany). Twenty patients prospectively scheduled for pars plana vitrectomy with membrane peeling due to an idiopathic ERM were included. Standard 23-gauge, three-port pars plana vitrectomy with membrane peeling and staining of the ERM with a trypan blue-based chromovitrectomy dye was performed in all cases. Intraoperative SD-OCT was performed before and after peeling and visualization of the posterior hyaloid, ERM, ILM, and presence of subfoveal hyporeflective zones were examined. OCT follow-ups were performed 2 days and 3 months after surgery. The study was approved by the local ethics committee of the city of Vienna. Successful intraoperative visualization of ERM by mi-SD-OCT was possible in all cases. The posterior hyaloid and ILM could not be seen in the mi-SD-OCT scans, whereas an intraoperative subfoveal hyporeflective zone presented in 35% of cases. In 12.5% an independent subfoveal hyporeflective zone presented postoperatively. Visual acuity improved in 93.8% of patients after surgery. mi-SD-OCT appears to be a valuable tool for intraoperative visualization of the ERM and offers immediate visualization of retinal anatomy during peeling. Therefore, it adds to the understanding of intraoperative traumatic changes due to the peeling procedure. Copyright 2016, SLACK Incorporated.

33 CFR 3.35-15 - Sector Charleston Marine Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah. 3.35-15 Section 3.35-15 Navigation..., SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-15 Sector Charleston Marine Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah...

33 CFR 3.35-15 - Sector Charleston Marine Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah. 3.35-15 Section 3.35-15 Navigation..., SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-15 Sector Charleston Marine Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah...

33 CFR 3.35-15 - Sector Charleston Marine Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah. 3.35-15 Section 3.35-15 Navigation..., SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-15 Sector Charleston Marine Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah...

33 CFR 3.35-15 - Sector Charleston Marine Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah. 3.35-15 Section 3.35-15 Navigation..., SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-15 Sector Charleston Marine Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah...

33 CFR 3.35-15 - Sector Charleston Marine Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah. 3.35-15 Section 3.35-15 Navigation..., SECTORS, MARINE INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventh Coast Guard District § 3.35-15 Sector Charleston Marine Inspection Zone and Captain of the Port Zone; Marine Safety Unit Savannah...

Quarzt Fabric Insights Across a Low P-High T Shear Zone

NASA Astrophysics Data System (ADS)

Gomez Barreiro, J.; Martinez-Catalan, J. R.; Benitez Perez, J.; Wenk, H.; Vogel, S. C.; Alcock, J. E.

2013-12-01

The evolution of mylonitic fabric in quartzites across a Low-P / High-T gradient within the Lugo Dome Extensional system (NW Spain) is analyzed. Quantitative texture measurements with TOF neutron diffraction, Shape preferred orientation (SPO) and Crystal Size Distribution (CSD) analyses were correlated with tectonothermal data to constraint the prevalence of ductile deformative fabrics exposed to cycles of dynamic and static recrystallization. Results suggest two stages in the evolution of mylonites in close correlation to thermal gradient, 1) a pervasive ductile deformation affecting most of the shear zone volume, with the development of symmetric cross girdle c-axes fabric suggesting slip on {c,r,m} and dynamically recrystallized microstructures which resulted into the refinement of the grain-size. 2) An heterogeneous deformation stage where strain partition led to the formation of relatively active and passive domains. During this late stage, at deeper levels, High T detachments show [c]{m} slip system and dynamic recrystallization activation, with monoclinic texture patterns, meanwhile, passive domains followed an static recrystallization with abnormal grain growth and minor variation of early orthogonal texture patterns Neutron diffraction data (cross) and Rietveld model obtained with MAUD (solid line) of a mylonitic quartzite. Some important planes are indicated for the major phases.

A localized interaction surface for voltage-sensing domains on the pore domain of a K+ channel.

PubMed

Li-Smerin, Y; Hackos, D H; Swartz, K J

2000-02-01

Voltage-gated K+ channels contain a central pore domain and four surrounding voltage-sensing domains. How and where changes in the structure of the voltage-sensing domains couple to the pore domain so as to gate ion conduction is not understood. The crystal structure of KcsA, a bacterial K+ channel homologous to the pore domain of voltage-gated K+ channels, provides a starting point for addressing this question. Guided by this structure, we used tryptophan-scanning mutagenesis on the transmembrane shell of the pore domain in the Shaker voltage-gated K+ channel to localize potential protein-protein and protein-lipid interfaces. Some mutants cause only minor changes in gating and when mapped onto the KcsA structure cluster away from the interface between pore domain subunits. In contrast, mutants producing large changes in gating tend to cluster near this interface. These results imply that voltage-sensing domains interact with localized regions near the interface between adjacent pore domain subunits.

Rock Magnetic Study in the Methanogenesis Zone, Site U1437, IODP Exp 350, Izu Rear Arc

NASA Astrophysics Data System (ADS)

Kars, M. A. C.; Musgrave, R. J.; Kodama, K.; Jonas, A. S.

2015-12-01

In 2014, IODP Expedition 350 drilled a 1806.5 m deep hole at Site U1437 in the Izu Bonin rear arc. The Site presents an unusual deep methanogenesis zone because of a release of sulfate below the sulfate reduction zone (27-83 mbsf) which may buffer methanogenesis by anaerobic methanogens. Methane abundance gradually increases with depth, with significant abundance at ~750-1459 mbsf with a maximum value at 920 mbsf. The rock magnetic study carried out in Hole U1437D from ~775 to ~1000 mbsf shows a drastic change of the magnetic properties at ~850 mbsf coincidently with a stronger release of methane from < 60 ppm at 841 mbsf to ~300 ppm at 854 mbsf. That also corresponds to a depth interval where no core was recovered (~846-854 mbsf). For the sake of clarity, we call hereafter zone A the depth interval above this non-recovered interval (775-846 mbsf) and zone B the interval below (854-1000 mbsf). Both belong to the same lithostratigraphic unit composed of tuffaceous mudstones intercalated with volcanoclastics. In the zone A, NRM, magnetic susceptibility, ARM, SIRM, HIRM display high values. In the zone B, these parameters show much lower values of one order of magnitude less, except for the interval 936-950 mbsf that corresponds to a local maximum (but still lower values than the zone A). Besides, the rock magnetic parameters for grain size and coercivity, such as ARM/χ, S-ratio and Bcr do not show any variations throughout the entire studied interval, although S-ratio displays slightly lower values from ~850 to ~930 mbsf. Grains are low coercivity pseudo-single domain sized. According to the present data, two preliminary hypotheses can be proposed to explain the observations. 1) The non-recovered interval between the zones A and B can be caused by the presence of a sedimentary hiatus and/or a fault, which may be consistent with the observed change in sedimentation rate. 2) No hiatus in the sedimentation. The changes in the magnetic properties can be explained by a

High temperature pseudotachylytes and ductile shear zones in dry rocks from the continental lower crust (Lofoten, Norway)

NASA Astrophysics Data System (ADS)

Menegon, Luca; Pennacchioni, Giorgio; Harris, Katherine; Wood, Elliot

2014-05-01

Understanding the mechanisms of initiation and growth of shear zones under lower crustal conditions is of fundamental importance when assessing lithosphere rheology and strength. In this study we investigate brittle-ductile shear zones developed under lower crustal conditions in anorthosites from Nusfjord, Lofoten (northern Norway). Steep ductile shear zones trend E-W to ESE-WSW and have a stretching lineation plunging steeply to the SSW or SSE. The shear sense is normal (south block down to the south) as indicated by SC and SC' fabrics and sigmoidal foliations. The shear zone show a mylonitic to ultramylonitic fabric, sharp boundaries to the host anorthosites, and abundant anastomosing dark fine-grained layers along the main foliation. The fine-grained layers localized much of the strain. Relatively lower strain domains within or adjacent to shear zones indicate that the fine dark bands of mylonites represent transposed pseudotachylyte which still locally preserve the pristine structures such as chilled margins, breccia textures with angular clasts of the host rock and injection veins; intersecting veins of pseudotachylyte record multiple stages of seismic slip. The orientation of injection veins and marker offset along the most preserved pseudotachylyte fault veins indicate approximately a sinistral strike slip kinematic during faulting event responsible for the friction-induced melting. These observations indicate that ductile shear zones exploited pre-existing brittle fault zones including a network of pseudotachylytes, and that the fine-grained "ultramylonites" derive from former fine-grained pseudotachylytes. The pseudotachylyte microstructure is dominated by plagioclase microlites dispersed in a groundmass of fine-grained clinopyroxene. Clinopyroxene recrystallizes in the damage zone flanking the pseudotachylytes, indicating high metamorphic grade during pseudotachylyte formation. Small idioblastic or cauliflower garnet are scattered through the matrix and

33 CFR 3.85-15 - Sector Anchorage: Western Alaska Marine Inspection Zone and Captain of the Port Zones; Marine...

Code of Federal Regulations, 2014 CFR

2014-07-01

... Marine Inspection Zone and Captain of the Port Zones; Marine Safety Unit Valdez: Prince William Sound Marine Inspection and Captain of the Port Zones. 3.85-15 Section 3.85-15 Navigation and Navigable Waters... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventeenth Coast Guard District § 3.85-15 Sector Anchorage...

33 CFR 3.85-15 - Sector Anchorage: Western Alaska Marine Inspection Zone and Captain of the Port Zones; Marine...

Code of Federal Regulations, 2011 CFR

2011-07-01

... Marine Inspection Zone and Captain of the Port Zones; Marine Safety Unit Valdez: Prince William Sound Marine Inspection and Captain of the Port Zones. 3.85-15 Section 3.85-15 Navigation and Navigable Waters... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventeenth Coast Guard District § 3.85-15 Sector Anchorage...

33 CFR 3.85-15 - Sector Anchorage: Western Alaska Marine Inspection Zone and Captain of the Port Zones; Marine...

Code of Federal Regulations, 2012 CFR

2012-07-01

... Marine Inspection Zone and Captain of the Port Zones; Marine Safety Unit Valdez: Prince William Sound Marine Inspection and Captain of the Port Zones. 3.85-15 Section 3.85-15 Navigation and Navigable Waters... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventeenth Coast Guard District § 3.85-15 Sector Anchorage...

33 CFR 3.85-15 - Sector Anchorage: Western Alaska Marine Inspection Zone and Captain of the Port Zones; Marine...

Code of Federal Regulations, 2013 CFR

2013-07-01

... Marine Inspection Zone and Captain of the Port Zones; Marine Safety Unit Valdez: Prince William Sound Marine Inspection and Captain of the Port Zones. 3.85-15 Section 3.85-15 Navigation and Navigable Waters... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventeenth Coast Guard District § 3.85-15 Sector Anchorage...

33 CFR 3.85-15 - Sector Anchorage: Western Alaska Marine Inspection Zone and Captain of the Port Zones; Marine...

Code of Federal Regulations, 2010 CFR

2010-07-01

... Marine Inspection Zone and Captain of the Port Zones; Marine Safety Unit Valdez: Prince William Sound Marine Inspection and Captain of the Port Zones. 3.85-15 Section 3.85-15 Navigation and Navigable Waters... INSPECTION ZONES, AND CAPTAIN OF THE PORT ZONES Seventeenth Coast Guard District § 3.85-15 Sector Anchorage...

Correlation Between Intercritical Heat-Affected Zone and Type IV Creep Damage Zone in Grade 91 Steel

NASA Astrophysics Data System (ADS)

Wang, Yiyu; Kannan, Rangasayee; Li, Leijun

2018-04-01

A soft zone in Cr-Mo steel weldments has been reported to accompany the infamous Type IV cracking, the highly localized creep damage in the heat-affected zone of creep-resistant steels. However, the microstructural features and formation mechanism of this soft zone are not well understood. In this study, using microhardness profiling and microstructural verification, the initial soft zone in the as-welded condition was identified to be located in the intercritical heat-affected zone of P91 steel weldments. It has a mixed structure, consisting of Cr-rich re-austenitized prior austenite grains and fine Cr-depleted, tempered martensite grains retained from the base metal. The presence of these further-tempered retained grains, originating from the base metal, is directly responsible for the hardness reduction of the identified soft zone in the as-welded condition. The identified soft zone exhibits a high location consistency at three thermal stages. Local chemistry analysis and thermodynamic calculation show that the lower chromium concentrations inside these retained grains thermodynamically decrease their potentials for austenitic transformation during welding. Heterogeneous grain growth is observed in the soft zone during postweld heat treatment. The mismatch of strengths between the weak Cr-depleted grains and strong Cr-rich grains enhances the creep damage. Local deformation of the weaker Cr-depleted grains accelerates the formation of creep cavities.

76 FR 48751 - Security Zones; Captain of the Port Lake Michigan Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2011-08-09

...-AA87 Security Zones; Captain of the Port Lake Michigan Zone AGENCY: Coast Guard, DHS. ACTION: Notice of... in the Chicago area, the Captain of the Port Sector Lake Michigan has determined that to better... critical infrastructure in the Chicago area. Based on this review, the Captain of the Port Sector Lake...

Application of Alignment Methodologies to Spatial Ontologies in the Hydro Domain

NASA Astrophysics Data System (ADS)

Lieberman, J. E.; Cheatham, M.; Varanka, D.

2015-12-01

Ontologies are playing an increasing role in facilitating mediation and translation between datasets representing diverse schemas, vocabularies, or knowledge communities. This role is relatively straightforward when there is one ontology comprising all relevant common concepts that can be mapped to entities in each dataset. Frequently, one common ontology has not been agreed to. Either each dataset is represented by a distinct ontology, or there are multiple candidates for commonality. Either the one most appropriate (expressive, relevant, correct) ontology must be chosen, or else concepts and relationships matched across multiple ontologies through an alignment process so that they may be used in concert to carry out mediation or other semantic operations. A resulting alignment can be effective to the extent that entities in in the ontologies represent differing terminology for comparable conceptual knowledge. In cases such as spatial ontologies, though, ontological entities may also represent disparate conceptualizations of space according to the discernment methods and application domains on which they are based. One ontology's wetland concept may overlap in space with another ontology's recharge zone or wildlife range or water feature. In order to evaluate alignment with respect to spatial ontologies, alignment has been applied to a series of ontologies pertaining to surface water that are used variously in hydrography (characterization of water features), hydrology (study of water cycling), and water quality (nutrient and contaminant transport) application domains. There is frequently a need to mediate between datasets in each domain in order to develop broader understanding of surface water systems, so there is a practical as well theoretical value in the alignment. From a domain expertise standpoint, the ontologies under consideration clearly contain some concepts that are spatially as well as conceptually identical and then others with less clear

Zoning, equity, and public health.

PubMed

Maantay, J

2001-07-01

Zoning, the most prevalent land use planning tool in the United States, has substantial implications for equity and public health. Zoning determines where various categories of land use may go, thereby influencing the location of resulting environmental and health impacts. Industrially zoned areas permit noxious land uses and typically carry higher environmental burdens than other areas. Using New York City as a case study, the author shows that industrial zones have large residential populations within them or nearby. Noxious uses tend to be concentrated in poor and minority industrial neighborhoods because more affluent industrial areas and those with lower minority populations are rezoned for other uses, and industrial zones in poorer neighborhoods are expanded. Zoning policies, therefore, can have adverse impacts on public health and equity. The location of noxious uses and the pollution they generate have ramifications for global public health and equity; these uses have been concentrated in the world's poorer places as well as in poorer places within more affluent countries. Planners, policymakers, and public health professionals must collaborate on a worldwide basis to address these equity, health, and land use planning problems.

Zoning, equity, and public health.

PubMed Central

Maantay, J

2001-01-01

Zoning, the most prevalent land use planning tool in the United States, has substantial implications for equity and public health. Zoning determines where various categories of land use may go, thereby influencing the location of resulting environmental and health impacts. Industrially zoned areas permit noxious land uses and typically carry higher environmental burdens than other areas. Using New York City as a case study, the author shows that industrial zones have large residential populations within them or nearby. Noxious uses tend to be concentrated in poor and minority industrial neighborhoods because more affluent industrial areas and those with lower minority populations are rezoned for other uses, and industrial zones in poorer neighborhoods are expanded. Zoning policies, therefore, can have adverse impacts on public health and equity. The location of noxious uses and the pollution they generate have ramifications for global public health and equity; these uses have been concentrated in the world's poorer places as well as in poorer places within more affluent countries. Planners, policymakers, and public health professionals must collaborate on a worldwide basis to address these equity, health, and land use planning problems. PMID:11441726

Critical domain interactions for type A RNase P RNA catalysis with and without the specificity domain

PubMed Central

Mao, Guanzhong; Srivastava, Abhishek S.; Wu, Shiying; Kosek, David; Lindell, Magnus

2018-01-01

The natural trans-acting ribozyme RNase P RNA (RPR) is composed of two domains in which the catalytic (C-) domain mediates cleavage of various substrates. The C-domain alone, after removal of the second specificity (S-) domain, catalyzes this reaction as well, albeit with reduced efficiency. Here we provide experimental evidence indicating that efficient cleavage mediated by the Escherichia coli C-domain (Eco CP RPR) with and without the C5 protein likely depends on an interaction referred to as the "P6-mimic". Moreover, the P18 helix connects the C- and S-domains between its loop and the P8 helix in the S-domain (the P8/ P18-interaction). In contrast to the "P6-mimic", the presence of P18 does not contribute to the catalytic performance by the C-domain lacking the S-domain in cleavage of an all ribo model hairpin loop substrate while deletion or disruption of the P8/ P18-interaction in full-size RPR lowers the catalytic efficiency in cleavage of the same model hairpin loop substrate in keeping with previously reported data using precursor tRNAs. Consistent with that P18 is not required for cleavage mediated by the C-domain we show that the archaeal Pyrococcus furiosus RPR C-domain, which lacks the P18 helix, is catalytically active in trans without the S-domain and any protein. Our data also suggest that the S-domain has a larger impact on catalysis for E. coli RPR compared to P. furiosus RPR. Finally, we provide data indicating that the absence of the S-domain and P18, or the P8/ P18-interaction in full-length RPR influences the charge distribution near the cleavage site in the RPR-substrate complex to a small but reproducible extent. PMID:29509761

Normal Central Zone of the Prostate and Central Zone Involvement by Prostate Cancer: Clinical and MR Imaging Implications

PubMed Central

Akin, Oguz; Franiel, Tobias; Goldman, Debra A.; Udo, Kazuma; Touijer, Karim A.; Reuter, Victor E.; Hricak, Hedvig

2012-01-01

Purpose: To describe the anatomic features of the central zone of the prostate on T2-weighted and diffusion-weighted (DW) magnetic resonance (MR) images and evaluate the diagnostic performance of MR imaging in detection of central zone involvement by prostate cancer. Materials and Methods: The institutional review board waived informed consent and approved this retrospective, HIPAA-compliant study of 211 patients who underwent T2-weighted and DW MR imaging of the prostate before radical prostatectomy. Whole-mount step-section pathologic findings were the reference standard. Two radiologists independently recorded the visibility, MR signal intensity, size, and symmetry of the central zone and scored the likelihood of central zone involvement by cancer on T2-weighted MR images and on T2-weighted MR images plus apparent diffusion coefficient (ADC) maps generated from the DW MR images. Descriptive summary statistics were calculated for central zone imaging features. Sensitivity, specificity, and area under the curve were used to evaluate reader performance in detecting central zone involvement. Results: For readers 1 and 2, the central zone was visible, at least partially, in 177 (84%) and 170 (81%) of 211 patients, respectively. The most common imaging appearance of the central zone was symmetric, homogeneous low signal intensity. Cancers involving the central zone had higher prostate-specific antigen values, Gleason scores, and rates of extracapsular extension and seminal vesicle invasion compared with cancers not involving the central zone (P < .05). Area under the curve, sensitivity, and specificity in detecting central zone involvement were 0.70, 0.30, and 0.96 for reader 1 and 0.65, 0.35, and 0.93 for reader 2, and these values did not differ significantly between T2-weighted imaging and T2-weighted imaging plus ADC maps. Conclusion: The central zone was visualized in most patients. Cancers involving the central zone were associated with more aggressive disease

Iowa Work Zone Fatalities

DOT National Transportation Integrated Search

2011-01-01

From March through November, the Iowa DOT may have up to 500 road construction work zones, and each of the department's maintenance garages may establish one or more short-term work zones per day. Couple that with the work of cities and counties, and...

Foreshock Patterns Preceding Great Earthquakes in the Subduction Zone of Chile

NASA Astrophysics Data System (ADS)

Papadopoulos, G. A.; Minadakis, G.

2016-10-01

Foreshock activity is considered as one of the most promising precursory changes for the main shock prediction in the short term. Averaging over several foreshock sequences has shown that foreshocks are characterized by distinct 3D patterns: their epicenters move towards the main shock epicenter, event count accelerates, and b-value drops. However, these space-time-size patterns were verified so far only in a very few individual cases mainly due to inadequate seismicity catalogue data. We have investigated 3D foreshock patterns before the M w 8.8 Maule in 27 February 2010, M w 8.1 Iquique in 1 April 2014, and M w 8.4 Illapel in 16 September 2015 great earthquakes in the Chile subduction zone. To avoid biased results, no a priori spatiotemporal definitions of foreshocks were inserted. The procedure was based on pattern recognition from statistically significant seismicity changes in the three domains. The pattern recognition in one domain was independent of the pattern recognition in another domain. We found and verified with two independent catalogue data sets (CSN, IPOC) that within a critical area of ca. 65 km from the main shock epicenter, the 2014 event was preceded by distinct foreshock 3D patterns. A nearly weak foreshock stage (20 January-14 March 2014) was followed by a main-strong stage (15 March-1 April 2014) highly significant in all domains, although foreshock activity slightly decreased in about the last 5 days. Seismic moment release also accelerated in the last stage due to the occurrence of a cluster of very strong foreshock events. Foreshock activity very likely occurred in the hanging-wall fault domain on the South American Plate overriding Nazca Plate. The 2014 foreshock activity was quite similar to the one preceding the 6 Apr. 2009 L' Aquila (Italy) M w 6.3 earthquake associated with normal faulting. Using the 2014 earthquake as a reference event, we observed that similar foreshock 3D patterns preceded the 2010 and 2015 earthquakes within

33 CFR 165.T11-589 - Safety zone; SFOBB Demolition Safety Zone, San Francisco, CA.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Guard District § 165.T11-589 Safety zone; SFOBB Demolition Safety Zone, San Francisco, CA. (a) Location... Safety Zone, San Francisco, CA. 165.T11-589 Section 165.T11-589 Navigation and Navigable Waters COAST... paragraph (a) of this section will be in effect from 6 a.m. to 7 p.m. daily from September 1, 2013 until...

A viscoplastic shear-zone model for episodic slow slip events in oceanic subduction zones

NASA Astrophysics Data System (ADS)

Yin, A.; Meng, L.

2016-12-01

Episodic slow slip events occur widely along oceanic subduction zones at the brittle-ductile transition depths ( 20-50 km). Although efforts have been devoted to unravel their mechanical origins, it remains unclear about the physical controls on the wide range of their recurrence intervals and slip durations. In this study we present a simple mechanical model that attempts to account for the observed temporal evolution of slow slip events. In our model we assume that slow slip events occur in a viscoplastic shear zone (i.e., Bingham material), which has an upper static and a lower dynamic plastic yield strength. We further assume that the hanging wall deformation is approximated as an elastic spring. We envision the shear zone to be initially locked during forward/landward motion but is subsequently unlocked when the elastic and gravity-induced stress exceeds the static yield strength of the shear zone. This leads to backward/trenchward motion damped by viscous shear-zone deformation. As the elastic spring progressively loosens, the hanging wall velocity evolves with time and the viscous shear stress eventually reaches the dynamic yield strength. This is followed by the termination of the trenchward motion when the elastic stress is balanced by the dynamic yield strength of the shear zone and the gravity. In order to account for the zig-saw slip-history pattern of typical repeated slow slip events, we assume that the shear zone progressively strengthens after each slow slip cycle, possibly caused by dilatancy as commonly assumed or by progressive fault healing through solution-transport mechanisms. We quantify our conceptual model by obtaining simple analytical solutions. Our model results suggest that the duration of the landward motion increases with the down-dip length and the static yield strength of the shear zone, but decreases with the ambient loading velocity and the elastic modulus of the hanging wall. The duration of the backward/trenchward motion depends

Low grade metamorphism fluid circulation in a sedimentary environment thrust fault zone: properties and modeling

NASA Astrophysics Data System (ADS)

Trincal, Vincent; Lacroix, Brice; Buatier, Martine D.; Charpentier, Delphine; Labaume, Pierre; Lahfid, Abdeltif

2014-05-01

In fold-and-thrust belts, shortening is mainly accommodated by thrust faults that can constitute preferential pathways for fluid circulation. The present study focuses on the Pic de Port Vieux thrust, a second-order thrust related to major Gavarnie thrust in the Axial Zone of the Pyrenees. The fault juxtaposes lower Triassic red siltstones and sandstones in the hanging-wall and Upper Cretaceous limestone in the footwall. A dense network of synkinematic quartz-chlorite veins is present in outcrop and allows to unravel the nature of the fluid that circulated in the fault zone. The hanging wall part of fault zone comprises a core which consists of intensely foliated phyllonite; the green color of this shear zone is related to the presence of abundant newly-formed chlorite. Above, the damage zone consists of red pelites and sandstones. Both domains feature kinematic markers like S-C type shear structures associated with shear and extension quartz-chlorite veins and indicate a top to the south displacement. In the footwall, the limestone display increasing mylonitization and marmorization when getting close to the contact. In order to investigate the mineralogical and geochemical changes induced by deformation and subsequent fluid flow, sampling was conducted along a complete transect of the fault zone, from the footwall limestone to the red pelites of the hanging wall. In the footwall limestone, stable isotope and Raman spectroscopy analyzes were performed. The strain gradient is strongly correlated with a high decrease in δ18OV PDB values (from -5.5 to -14) when approaching the thrust (i.e. passing from limestone to marble) while the deformation temperatures estimated with Raman spectroscopy on carbon remain constant around 300° C. These results suggest that deformation is associated to a dynamic calcite recrystallization of carbonate in a fluid-open system. In the hanging wall, SEM observations, bulk chemical XRF analyses and mineral quantification from XRD

Microstructural Evolution during Mid-Crustal Shear Zone Thickening and Thinning, Mount Irene Detachment Zone, Fiordland, New Zealand

NASA Astrophysics Data System (ADS)

Negrini, M.; Smith, S. A. F.; Scott, J.; Rooney, J. S.; Demurtas, M.

2016-12-01

Recent work has shown that ductile shear zones experience cyclic variations in stress and strain rate due to, for example, elastic loading from earthquake slip on brittle faults or the presence of rigid particles and asperities within the shear zone. Such non-steady state flow conditions can promote microstructural changes including a decrease in grain sizes followed by a switch in the main deformation mechanisms. Understanding the microstructural changes that occur during non steady-state deformation is therefore critical in evaluating shear zone rheology. The Mount Irene shear zone formed during Cretaceous extension in the middle crust and was active at temperatures of 600°C and pressures of 6 kbar. The shear zone localized in a basal calcite marble layer typically 3-5 m thick containing hundreds of thin (mm-cm) calc-silicate bands that are now parallel to the shear zone boundaries. The lower boundary of the shear zone preserves meter-scale undulations that cause the shear zone to be squeezed in to regions that are <1.5 m thick. The calc-silicate bands act as "flow markers" and allow individual shear zone layers to be traced continuously through thick and thin regions, implying that the mylonites experienced cyclic variations in stress and strain rate. Calc-mylonite samples collected from the same layer close to the base of the shear zone reveal that layer thinning was accompanied by progressive microstructural changes including intense twinning, stretching and flattening of large calcite porphyroclasts as well as the development of interconnected networks of recrystallized calcite aggregates. EBSD analysis shows that the recrystallized aggregates contain polygonal calcite grains with microstructures (e.g. grain quadruple junctions) similar to those reported for neighbor-switching processes associated with grain boundary sliding and superplasticity. Ongoing and future work will utilize samples from across the full thickness of the shear zone to determine key

Domain adaptation via transfer component analysis.

PubMed

Pan, Sinno Jialin; Tsang, Ivor W; Kwok, James T; Yang, Qiang

2011-02-01

Domain adaptation allows knowledge from a source domain to be transferred to a different but related target domain. Intuitively, discovering a good feature representation across domains is crucial. In this paper, we first propose to find such a representation through a new learning method, transfer component analysis (TCA), for domain adaptation. TCA tries to learn some transfer components across domains in a reproducing kernel Hilbert space using maximum mean miscrepancy. In the subspace spanned by these transfer components, data properties are preserved and data distributions in different domains are close to each other. As a result, with the new representations in this subspace, we can apply standard machine learning methods to train classifiers or regression models in the source domain for use in the target domain. Furthermore, in order to uncover the knowledge hidden in the relations between the data labels from the source and target domains, we extend TCA in a semisupervised learning setting, which encodes label information into transfer components learning. We call this extension semisupervised TCA. The main contribution of our work is that we propose a novel dimensionality reduction framework for reducing the distance between domains in a latent space for domain adaptation. We propose both unsupervised and semisupervised feature extraction approaches, which can dramatically reduce the distance between domain distributions by projecting data onto the learned transfer components. Finally, our approach can handle large datasets and naturally lead to out-of-sample generalization. The effectiveness and efficiency of our approach are verified by experiments on five toy datasets and two real-world applications: cross-domain indoor WiFi localization and cross-domain text classification.

Thermal effects on domain orientation of tetragonal piezoelectrics

NASA Astrophysics Data System (ADS)

Chang, Wonyoung

Thermal effects on electrical poling or mechanical grinding induced texture in tetragonal lead zirconate titanate (PZT) and lead titanate (PT) have been investigated using ex situ and in situ X-ray diffraction (XRD) with an area detector. According to previous results using ex situ XRD, domain configurations of poled samples after heat-treatment at or higher than the Curie temperature (TC) are similar to that of unpoled samples showing random domain distributions. The texture parameter called multiples of a random distribution (MRD) gradually decreases with increasing depoling temperature. On the other hand, using in situ XRD measurements, it was found that the MRD maximum for soft PZT initially increases with temperature up to approximately 100°C and then falls to unity at temperatures approaching the TC, whereas the MRD of hard PZT and PT initially undergoes a smaller increase or no change. Mechanical strain energy has an apparent effect on domain wall mobility. In contrast with previous results on electrical poling, mechanically-ground PT and soft PZT materials retained strong ferroelastic textures during thermal cycling, even after excursions to temperatures slightly above the TC . For the ground PT, it was found that repeated cycling above T C results in changes in both peak intensity and peak position, whereas the ground soft PZT undergoes the decrease in intensity of the (002) reflection after the first cycle of heating. Residual stresses in the surface region from grinding resulted in domain wall motion and the retention of textures in annealed samples. The research in this thesis demonstrates that the magnitude of loading applied to the sample surface, the speed used for grinding, or the grit size, can greatly affect the grinding induced damage zone and the depoling behavior of piezoelectric ceramics. Among the possible effects of grinding conditions on surface textures, one of particular interest is the effect of mechanical stresses produced during

78 FR 25410 - Safety Zone; Tall Ship Safety Zones; War of 1812 Bicentennial Commemoration, Great Lakes

Federal Register 2010, 2011, 2012, 2013, 2014

2013-05-01

... DEPARTMENT OF HOMELAND SECURITY Coast Guard 33 CFR Part 165 [Docket No. USCG-2013-0192] RIN 1625-AA00 Safety Zone; Tall Ship Safety Zones; War of 1812 Bicentennial Commemoration, Great Lakes AGENCY... 2013 and the War of 1812 Bicentennial Commemoration. These safety zones will ensure the safety of...

75 FR 21990 - Safety Zone; Extended Debris Removal in the Lake Champlain Bridge Construction Zone (Between...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-27

...-AA00 Safety Zone; Extended Debris Removal in the Lake Champlain Bridge Construction Zone (Between... surrounding the Lake Champlain Bridge construction zone between Chimney Point, VT and Crown Point, NY. This... of debris from the old Crown Point bridge demolition. The debris must be cleared from the navigable...

Inversion of magnetotelluric data using integral equation approach with variable sensitivity domain: Application to EarthScope MT data

NASA Astrophysics Data System (ADS)

Čuma, Martin; Gribenko, Alexander; Zhdanov, Michael S.

2017-09-01

We have developed a multi-level parallel magnetotelluric (MT) integral equation based inversion program which uses variable sensitivity domain. The limited sensitivity of the data, which decreases with increasing frequency, is exploited by a receiver sensitivity domain, which also varies with frequency. We assess the effect of inverting principal impedances, full impedance tensor, and full tensor jointly with magnetovariational data (tipper). We first apply this method to several models and then invert the EarthScope MT data. We recover well the prominent features in the area including resistive structure associated with the Juan de Fuca slab subducting beneath the northwestern United States, the conductive zone of partially melted material above the subducting slab at the Cascade volcanic arc, conductive features in the Great Basin and in the area of Yellowstone associated with the hot spot, and resistive areas to the east corresponding to the older and more stable cratons.

Multifunctionalities driven by ferroic domains

NASA Astrophysics Data System (ADS)

Yang, J. C.; Huang, Y. L.; He, Q.; Chu, Y. H.

2014-08-01

Considerable attention has been paid to ferroic systems in pursuit of advanced applications in past decades. Most recently, the emergence and development of multiferroics, which exhibit the coexistence of different ferroic natures, has offered a new route to create functionalities in the system. In this manuscript, we step from domain engineering to explore a roadmap for discovering intriguing phenomena and multifunctionalities driven by periodic domain patters. As-grown periodic domains, offering exotic order parameters, periodic local perturbations and the capability of tailoring local spin, charge, orbital and lattice degrees of freedom, are introduced as modeling templates for fundamental studies and novel applications. We discuss related significant findings on ferroic domain, nanoscopic domain walls, and conjunct heterostructures based on the well-organized domain patterns, and end with future prospects and challenges in the field.

Text Processing of Domain-Related Information for Individuals with High and Low Domain Knowledge.

ERIC Educational Resources Information Center

Spilich, George J.; And Others

1979-01-01

The way in which previously acquired knowledge affects the processing on new domain-related information was investigated. Text processing was studied in two groups differing in knowledge of the domain of baseball. A knowledge structure for the domain was constructed, and text propositions were classified. (SW)

Characterized Brillouin scattering in silica optical fiber tapers based on Brillouin optical correlation domain analysis.

PubMed

Zou, Weiwen; Jiang, Wenning; Chen, Jianping

2013-03-11

This paper demonstrates stimulated Brillouin scattering (SBS) characterization in silica optical fiber tapers drawn from commercial single mode optical fibers by hydrogen flame. They have different waist diameters downscaled from 5 μm to 42 μm. The fully-distributed SBS measurement along the fiber tapers is implemented by Brillouin optical correlation domain analysis technique with millimeter spatial resolution. It is found that the Brillouin frequency shift (BFS) in the waist of all fiber tapers is approximately the same (i.e., ~11.17 GHz at 1550 nm). However, the BFS is gradually reduced and the Brillouin gain decreases from the waist to the untapered zone in each fiber taper.

Nicotinic Receptor Transduction Zone: Invariant Arginine Couples to Multiple Electron-Rich Residues

PubMed Central

Mukhtasimova, Nuriya; Sine, Steven M.

2013-01-01

Summary Gating of the muscle-type acetylcholine receptor (AChR) channel depends on communication between the ACh-binding site and the remote ion channel. A key region for this communication is located within the structural transition zone between the ligand-binding and pore domains. Here, stemming from β-strand 10 of the binding domain, the invariant αArg209 lodges within the hydrophobic interior of the subunit and is essential for rapid and efficient channel gating. Previous charge-reversal experiments showed that the contribution of αArg209 to channel gating depends strongly on αGlu45, also within this region. Here we determine whether the contribution of αArg209 to channel gating depends on additional anionic or electron-rich residues in this region. Also, to reconcile diverging findings in the literature, we compare the dependence of αArg209 on αGlu45 in AChRs from different species, and compare the full agonist ACh with the weak agonist choline. Our findings reveal that the contribution of αArg209 to channel gating depends on additional nearby electron-rich residues, consistent with both electrostatic and steric contributions. Furthermore, αArg209 and αGlu45 show a strong interdependence in both human and mouse AChRs, whereas the functional consequences of the mutation αE45R depend on the agonist. The emerging picture shows a multifaceted network of interdependent residues that are required for communication between the ligand-binding and pore domains. PMID:23442857

High Resolution Seismic Images of Transition Zone Discontinuities beneath the Hawaii-Emperor Seamount Chain

NASA Astrophysics Data System (ADS)

Cao, Q.; Wang, P.; van der Hilst, R. D.; Shim, S.

2009-12-01

Taking advantage of the abundance of natural sources (earthquakes) in western Pacific subduction zones and the many seismograph stations in the Americas, we use inverse scattering - a generalized Radon transform - of SS precursors to image the transition zone discontinuities underneath Hawaii and the Hawaii-Emperor seamount chain. The GRT makes use of scattering theory and extracts structural information from broad band data windows that include precursors to SS (which are the specular reflections at the discontinuities that form the main arrivals) as well as non-specular scattered energy (which is often discarded as noise). More than 150,000 seismograms (from the IRIS Data Management Center) are used to form a 3-D image of the transition zone discontinuities beneath the central Pacific. In addition to clear signals near 410, 520, and 660 km depth, the data also reveal scatter interfaces near 370 km dept and between 800-1000 km depth, which may be regional, laterally intermittent scatter horizons. Our images reveal a conspicuous uplift of the 660 discontinuity in a region of 800km in diameter to the west of the active volcanoes of Hawaii. No correspondent localized depression of the 410 discontinuity is found. Instead, we find a smaller scale anomaly suggesting that the 410 discontinuity is locally elevated in the same region. This may indicate the presence of melt or minor chemical constitutes. The lack of correlation between and differences in lateral length scale of the topographies of the 410 and 660 km discontinuities are also consistent with a deep-mantle plume impinging on the transition zone, creating a pond of hot material underneath 660 discontinuity, and with secondary plumes connecting to the present-day hotspot at Earth’s surface. Our observations suggest that more complicated plume morphology and plume dynamics within the Earth's mantle should be taken into account to describe the plumes and, in particular, mass transport across the transition zone

77 FR 9528 - Security Zone; Protection of Military Cargo, Captain of the Port Zone Puget Sound

Federal Register 2010, 2011, 2012, 2013, 2014

2012-02-17

... DEPARTMENT OF HOMELAND SECURITY Coast Guard 33 CFR Part 165 [Docket No. USCG-2012-0087] Security Zone; Protection of Military Cargo, Captain of the Port Zone Puget Sound AGENCY: Coast Guard, DHS... Waterway Security Zone in Commencement Bay, Tacoma, Washington from 6 a.m. on February 17, 2012, through 11...

75 FR 63714 - Security Zone: Passenger Vessels, Sector Southeastern New England Captain of the Port Zone

Federal Register 2010, 2011, 2012, 2013, 2014

2010-10-18

..., in the aggregate, or by the private sector of $100,000,000 (adjusted for inflation) or more in any... Security Zone: Passenger Vessels, Sector Southeastern New England Captain of the Port Zone AGENCY: Coast... moving security zones around passenger vessels in the Sector Southeastern New England Captain of the Port...

A Novel Domain Assembly Routine for Creating Full-Length Models of Membrane Proteins from Known Domain Structures.

PubMed

Koehler Leman, Julia; Bonneau, Richard

2018-04-03

Membrane proteins composed of soluble and membrane domains are often studied one domain at a time. However, to understand the biological function of entire protein systems and their interactions with each other and drugs, knowledge of full-length structures or models is required. Although few computational methods exist that could potentially be used to model full-length constructs of membrane proteins, none of these methods are perfectly suited for the problem at hand. Existing methods require an interface or knowledge of the relative orientations of the domains or are not designed for domain assembly, and none of them are developed for membrane proteins. Here we describe the first domain assembly protocol specifically designed for membrane proteins that assembles intra- and extracellular soluble domains and the transmembrane domain into models of the full-length membrane protein. Our protocol does not require an interface between the domains and samples possible domain orientations based on backbone dihedrals in the flexible linker regions, created via fragment insertion, while keeping the transmembrane domain fixed in the membrane. For five examples tested, our method mp_domain_assembly, implemented in RosettaMP, samples domain orientations close to the known structure and is best used in conjunction with experimental data to reduce the conformational search space.